Citrus Sinensis ID: 018072

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-
Protein Sequence
MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRFSSSRPSFRCVIIIRC
Secondary Structure (PSIPRED)
cccccccEEEEEEEEEEccccccEEEEEEEccccccEEEEEEEEEccccccHHHHccccccccccEEccccccEEEEEEcccccccccccEEEEccccccccccccccccccccccccccccccccccccccEEEEccEEEEEEEEccccccEEEEEccEEEEEccccccccEEEEcccccccccEEEEccccccccEEEEEcccHHHHHHHHHHHHHcccEEEEEEccccHHHHHHHccccEEEccccccccHHHHHHHHHcccccEEEEccccHHHHHHHHHHcccccEEEEEEEccccccEEEEcccccccccEEEEEEcccccccccHHHHHHHHHccccccEEccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccEEEEEEEEcccccccEEEEEEEccccccEEEEEEEEEEEcHHHHHHHHcccccccccEccccEEEEEEEEEcccccccccccEEEEcccccccccHHHHccccccccccHHHHHcccccccccccEEEccEEEEccccccccEcEEEEEHHHEEEccccccHHHHHHHHcHHHHHHHHHHcccccccccEEEEEcccHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHcccEEEcHHHccccHHHHHHHHccccEcEEEEccccHHHHHHHHHcEcccccEEEEcccccccccEEEccHHHHcccEEEEccHHHccHHHHHHHHHHHHHcccccEEEccccHHHHccccc
Coil and Loop (DISEMBL)
MSSTAGLILTCKAAVAweagkpliiqdvevappqaMEVRIKIKYtslcrtdlyfweskgqtplfprifgheaagvvesvgegvsdlevgdhvlpvftgecgdcrhcrsdvsnmcdllrinpvrgvmladgqsrfsingepvnhflgtstFSEYTVVHsgcvakinplapldkvcilscgvstglgatlnvakpergssvavFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKfgvtdfvntsehdrPIQEVIAEMTnggvdrsvectgnIDNMISAFECVHDGWGVAVLVgvpskdavfmtkpinvlnertlkgtffgnykprtdlpsvVDMYMNKVIrfsssrpsfrcviiirc
Flexible Loop (DISEMBL)
MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAegariagasriigvdrsskrFEEAkkfgvtdfvntsehdrpIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMtkpinvlnertlkgtffgnykprtdlpSVVDMYMNKVirfsssrpsfrcviiirc
Low Complexity Region (SEG)
MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHeaagvvesvgegvsdlevgdHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERgssvavfglgavglaaaegariagasriigVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRFSSSRPSFRCVIIIRC
Disordered region (IsUnstruct)
*****GLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS**RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRFSSSRPSFRCVIII**
Disordered Region (DISOPRED)
*****GL*LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRFSSSRPSFRCVIIIRC
Disordered Region (DISEMBL)
MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRFSSSRPSFRCVIIIRC
Disordered Region (DISPRO)
*****GLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRFSSSRPSFRCVIIIRC
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRFSSSRPSFRCVIIIRC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	361	2.2.26 [Sep-21-2011]
P14673	380	Alcohol dehydrogenase 1 O	N/A	no	0.958	0.910	0.783	1e-166
P14675	380	Alcohol dehydrogenase 3 O	N/A	no	0.958	0.910	0.783	1e-166
P14674	380	Alcohol dehydrogenase 2 O	N/A	no	0.958	0.910	0.783	1e-165
P48977	380	Alcohol dehydrogenase OS=	N/A	no	0.958	0.910	0.780	1e-165
P28032	380	Alcohol dehydrogenase 2 O	N/A	no	0.958	0.910	0.780	1e-164
Q2R8Z5	379	Alcohol dehydrogenase 1 O	yes	no	0.941	0.897	0.782	1e-164
Q75ZX4	379	Alcohol dehydrogenase 1 O	N/A	no	0.941	0.897	0.782	1e-164
P14219	379	Alcohol dehydrogenase 1 O	N/A	no	0.941	0.897	0.782	1e-163
P17648	380	Alcohol dehydrogenase OS=	N/A	no	0.947	0.9	0.783	1e-163
P00333	379	Alcohol dehydrogenase 1 O	N/A	no	0.941	0.897	0.785	1e-163

>sp|P14673|ADH1_SOLTU Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=ADH1 PE=2 SV=1

 Score =  583 bits (1502), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 271/346 (78%), Positives = 313/346 (90%)

Query: 1   MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ 60
           MS+T G ++ CKAAVAWEAGKPL++++V+VAPPQ MEVR+KI YTSLC TD+YFWE+KGQ
Sbjct: 1   MSTTVGQVIRCKAAVAWEAGKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQ 60

Query: 61  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 120
            P+FPRI GHEAAG+VESVGEGV++L  GDHVLPVFTGEC DC HC+S+ SNMC LLRIN
Sbjct: 61  NPVFPRILGHEAAGIVESVGEGVTELGPGDHVLPVFTGECKDCAHCKSEESNMCSLLRIN 120

Query: 121 PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 180
             RGVM+ DGQSRFSING+P+ HF+GTSTFSEYTVVH GCVAKINPLAPLDKVC+LSCG+
Sbjct: 121 TDRGVMINDGQSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGI 180

Query: 181 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 240
           STGLGATLNVAKP +GSSVA+FGLGAVGLAAAEGARIAGASRIIGVD ++ RFE+AKKFG
Sbjct: 181 STGLGATLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFG 240

Query: 241 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 300
           VT+FVN  ++ +P+QEVIAEMT+GGVDRSVECTG+ID MISAFECVHDGWGVAVLVGVP 
Sbjct: 241 VTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPH 300

Query: 301 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRF 346
           K+AVF T P+N+LNERTLKGTFFGNYKPR+D+PSVV+ YMNK +  
Sbjct: 301 KEAVFKTHPMNLLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELEL 346

Solanum tuberosum (taxid: 4113)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 1

>sp|P14675|ADH3_SOLTU Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=ADH3 PE=2 SV=1

 Score =  583 bits (1502), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 271/346 (78%), Positives = 312/346 (90%)

Query: 1   MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ 60
           MS+T G ++ CKAAVAWEAGKPL++++V+VAPPQ MEVR+KI YTSLC TD+YFWE+KGQ
Sbjct: 1   MSTTVGQVIRCKAAVAWEAGKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQ 60

Query: 61  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 120
            P+FPRI GHEAAG+VESVGEGV++L  GDHVLPVFTGEC DC HC+S+ SNMC LLRIN
Sbjct: 61  NPVFPRILGHEAAGIVESVGEGVTELAPGDHVLPVFTGECKDCAHCKSEESNMCSLLRIN 120

Query: 121 PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 180
             RGVM+ DGQSRFSING+P+ HF+GTSTFSEYTVVH GCVAKINPLAPLDKVC+LSCG+
Sbjct: 121 TDRGVMINDGQSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGI 180

Query: 181 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 240
           STGLGATLNVAKP +GSSVA+FGLGAVGLAAAEGARIAGASRIIGVD ++ RFE+AKKFG
Sbjct: 181 STGLGATLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFG 240

Query: 241 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 300
           VT+FVN  ++ +P+QEVIAEMT+GGVDRSVECTG+ID MISAFECVHDGWGVAVLVGVP 
Sbjct: 241 VTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPH 300

Query: 301 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRF 346
           K+AVF T P+N LNERTLKGTFFGNYKPR+D+PSVV+ YMNK +  
Sbjct: 301 KEAVFKTHPMNFLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELEL 346

Solanum tuberosum (taxid: 4113)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P14674|ADH2_SOLTU Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=ADH2 PE=2 SV=1

 Score =  583 bits (1502), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 271/346 (78%), Positives = 312/346 (90%)

Query: 1   MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ 60
           MS+T G ++ CKAAVAWEAGKPL++++V+VAPPQ MEVR+KI YTSLC TD+YFWE+KGQ
Sbjct: 1   MSTTTGQVIRCKAAVAWEAGKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQ 60

Query: 61  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 120
            P+FPRI GHEAAG+VESVGEGV++L  GDHVLPVFTGEC DC HC+S+ SNMC LLRIN
Sbjct: 61  NPVFPRILGHEAAGIVESVGEGVTELAPGDHVLPVFTGECKDCAHCKSEESNMCSLLRIN 120

Query: 121 PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 180
             RGVM+ DGQSRFSING+P+ HF+GTSTFSEYTVVH GCVAKINPLAPLDKVC+LSCG+
Sbjct: 121 TDRGVMINDGQSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGI 180

Query: 181 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 240
           STGLGATLNVAKP +GSSVA+FGLGAVGLAAAEGARIAGASRIIGVD ++ RFE+AKKFG
Sbjct: 181 STGLGATLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFG 240

Query: 241 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 300
           VT+FVN  ++ +P+QEVIAEMT+GGVDRSVECTG+ID MISAFECVHDGWGVAVLVGVP 
Sbjct: 241 VTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPH 300

Query: 301 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRF 346
           K+AVF T P+N LNERTLKGTFFGNYKPR+D+PSVV+ YMNK +  
Sbjct: 301 KEAVFKTHPMNFLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELEL 346

Solanum tuberosum (taxid: 4113)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P48977|ADH_MALDO Alcohol dehydrogenase OS=Malus domestica GN=ADH PE=2 SV=1

 Score =  580 bits (1494), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 270/346 (78%), Positives = 311/346 (89%)

Query: 1   MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ 60
           MS+TAG ++ C+AAVAWEAGKPL+I++VEVAPPQA EVRIKI +TSLC TD+YFWE+KGQ
Sbjct: 1   MSNTAGQVIRCRAAVAWEAGKPLVIEEVEVAPPQANEVRIKILFTSLCHTDVYFWEAKGQ 60

Query: 61  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 120
            PLFPRI+GHEA G+VESVGEGV+DL+ GDHVLPVFTGEC DC HC+S+ SNMCDLLRIN
Sbjct: 61  NPLFPRIYGHEAGGIVESVGEGVTDLKAGDHVLPVFTGECKDCAHCKSEESNMCDLLRIN 120

Query: 121 PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 180
             RGVML+DG+SRFSI G+P+ HF+GTSTFSEYTVVH GC+AKINP APLDKVC+LSCG+
Sbjct: 121 TDRGVMLSDGKSRFSIKGKPIYHFVGTSTFSEYTVVHVGCLAKINPSAPLDKVCLLSCGI 180

Query: 181 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 240
           STGLGATLNVAKP++GS+VAVFGLGAVGLAAAEGAR++GASRIIGVD  S RFEEAKKFG
Sbjct: 181 STGLGATLNVAKPKKGSTVAVFGLGAVGLAAAEGARLSGASRIIGVDLHSDRFEEAKKFG 240

Query: 241 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 300
           VT+FVN   H++P+QEVIAE+TN GVDRS+ECTG+ + MISAFECVHDGWGVAVLVGVP 
Sbjct: 241 VTEFVNPKAHEKPVQEVIAELTNRGVDRSIECTGSTEAMISAFECVHDGWGVAVLVGVPH 300

Query: 301 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRF 346
           KDAVF T P+N LNERTLKGTFFGNYK RTD+PSVV+ YMNK +  
Sbjct: 301 KDAVFKTHPVNFLNERTLKGTFFGNYKTRTDIPSVVEKYMNKELEL 346

Malus domestica (taxid: 3750)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P28032|ADH2_SOLLC Alcohol dehydrogenase 2 OS=Solanum lycopersicum GN=ADH2 PE=2 SV=2

 Score =  579 bits (1492), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 270/346 (78%), Positives = 310/346 (89%)

Query: 1   MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ 60
           MS+T G ++ CKAAVAWEAGKPL++++V+VAPPQ MEVR+KI YTSLC TD+YFWE+KGQ
Sbjct: 1   MSTTVGQVIRCKAAVAWEAGKPLVMEEVDVAPPQKMEVRLKILYTSLCHTDVYFWEAKGQ 60

Query: 61  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 120
            P+FPRI GHEAAG+VESVGEGV+DL  GDHVLPVFTGEC DC HC+S+ SNMC LLRIN
Sbjct: 61  NPVFPRILGHEAAGIVESVGEGVTDLAPGDHVLPVFTGECKDCAHCKSEESNMCSLLRIN 120

Query: 121 PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 180
             RGVML DG+SRFSING P+ HF+GTSTFSEYTVVH GCVAKINPLAPLDKVC+LSCG+
Sbjct: 121 TDRGVMLNDGKSRFSINGNPIYHFVGTSTFSEYTVVHVGCVAKINPLAPLDKVCVLSCGI 180

Query: 181 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 240
           STGLGA+LNVAKP +GSSVA+FGLGAVGLAAAEGARIAGASRIIGVD ++ RFE+AKKFG
Sbjct: 181 STGLGASLNVAKPTKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFG 240

Query: 241 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 300
           VT+FVN  ++ +P+QEVIAEMT+GGVDRSVECTG+ID MISAFECVHDGWGVAVLVGVP 
Sbjct: 241 VTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPH 300

Query: 301 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRF 346
           K+AVF T P+N LNERTLKGTFFGNYKPR+D+P VV+ YMNK +  
Sbjct: 301 KEAVFKTHPLNFLNERTLKGTFFGNYKPRSDIPCVVEKYMNKELEL 346

Solanum lycopersicum (taxid: 4081)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|Q2R8Z5|ADH1_ORYSJ Alcohol dehydrogenase 1 OS=Oryza sativa subsp. japonica GN=ADH1 PE=2 SV=2

 Score =  577 bits (1487), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 266/340 (78%), Positives = 308/340 (90%)

Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           +TAG ++ CKAAVAWEA KPL+I++VEVAPPQAMEVR+KI +TSLC TD+YFWE+KGQTP
Sbjct: 2   ATAGKVIKCKAAVAWEAAKPLVIEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQTP 61

Query: 63  LFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV 122
           +FPRIFGHEA G+VESVGEGV+DL  GDHVLPVFTGEC +C HC+S  SNMCDLLRIN  
Sbjct: 62  VFPRIFGHEAGGIVESVGEGVTDLAPGDHVLPVFTGECKECAHCKSAESNMCDLLRINTD 121

Query: 123 RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 182
           RGVM+ DG+SRFSING+P+ HF+GTSTFSEYTV+H GCVAKINP APLDKVC+LSCG+ST
Sbjct: 122 RGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPAAPLDKVCVLSCGIST 181

Query: 183 GLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 242
           GLGAT+NVAKP +GS+VA+FGLGAVGLAAAEGARIAGASRIIG+D ++ RFEEA+KFG T
Sbjct: 182 GLGATINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGIDLNANRFEEARKFGCT 241

Query: 243 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 302
           +FVN  +HD+P+Q+V+AEMTNGGVDRSVECTGNI+ MI AFECVHDGWGVAVLVGVP KD
Sbjct: 242 EFVNPKDHDKPVQQVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKD 301

Query: 303 AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 342
           A F T P+N LNERTLKGTFFGNYKPRTDLP+VV++YM K
Sbjct: 302 AEFKTHPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKK 341

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|Q75ZX4|ADH1_ORYSI Alcohol dehydrogenase 1 OS=Oryza sativa subsp. indica GN=ADH1 PE=2 SV=1

 Score =  577 bits (1487), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 266/340 (78%), Positives = 308/340 (90%)

Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           +TAG ++ CKAAVAWEA KPL+I++VEVAPPQAMEVR+KI +TSLC TD+YFWE+KGQTP
Sbjct: 2   ATAGKVIKCKAAVAWEAAKPLVIEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQTP 61

Query: 63  LFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV 122
           +FPRIFGHEA G+VESVGEGV+DL  GDHVLPVFTGEC +C HC+S  SNMCDLLRIN  
Sbjct: 62  VFPRIFGHEAGGIVESVGEGVTDLAPGDHVLPVFTGECKECAHCKSAESNMCDLLRINTD 121

Query: 123 RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 182
           RGVM+ DG+SRFSING+P+ HF+GTSTFSEYTV+H GCVAKINP APLDKVC+LSCG+ST
Sbjct: 122 RGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPAAPLDKVCVLSCGIST 181

Query: 183 GLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 242
           GLGAT+NVAKP +GS+VA+FGLGAVGLAAAEGARIAGASRIIG+D ++ RFEEA+KFG T
Sbjct: 182 GLGATINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGIDLNANRFEEARKFGCT 241

Query: 243 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 302
           +FVN  +HD+P+Q+V+AEMTNGGVDRSVECTGNI+ MI AFECVHDGWGVAVLVGVP KD
Sbjct: 242 EFVNPKDHDKPVQQVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKD 301

Query: 303 AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 342
           A F T P+N LNERTLKGTFFGNYKPRTDLP+VV++YM K
Sbjct: 302 AEFKTHPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKK 341

Oryza sativa subsp. indica (taxid: 39946)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P14219|ADH1_PENAM Alcohol dehydrogenase 1 OS=Pennisetum americanum GN=ADH1 PE=2 SV=1

 Score =  574 bits (1480), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 266/340 (78%), Positives = 308/340 (90%)

Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           +TAG ++ CKAAVAWEAGKPL I++VEVAPPQAMEVR+KI YTSLC TD+YFWE+KGQTP
Sbjct: 2   ATAGKVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRVKILYTSLCHTDVYFWEAKGQTP 61

Query: 63  LFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV 122
           +FPRIFGHEA G++ESVGEGV+D+  GDHVLPVFTGEC +C HC+S  SNMCDLLRIN V
Sbjct: 62  VFPRIFGHEAGGIIESVGEGVTDVAPGDHVLPVFTGECKECPHCKSAESNMCDLLRINTV 121

Query: 123 RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 182
           RGVM+ DG+SRFSING+P+ HF+GTSTFSEYTV+H GCVAKINP APLDKVC+LSCG+ST
Sbjct: 122 RGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPEAPLDKVCVLSCGIST 181

Query: 183 GLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 242
           GLGA++NVAKP +GS+VA+FGLGAVGLAAAEGARIAGASRIIGVD +  RFEEAKKFG T
Sbjct: 182 GLGASINVAKPPKGSTVAIFGLGAVGLAAAEGARIAGASRIIGVDLNPSRFEEAKKFGCT 241

Query: 243 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 302
           +FVN  +H++P+QEV+A+MTNGGVDRSVECTGNI+ MI AFECVHDGWGVAVLVGVP KD
Sbjct: 242 EFVNPKDHNKPVQEVLADMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKD 301

Query: 303 AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 342
           A F T P+N LNERTLKGTFFGN+KPRTDLP+VV++YM K
Sbjct: 302 AEFKTHPMNFLNERTLKGTFFGNFKPRTDLPNVVELYMKK 341

Pennisetum americanum (taxid: 4543)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P17648|ADH_FRAAN Alcohol dehydrogenase OS=Fragaria ananassa GN=ADH PE=3 SV=2

 Score =  574 bits (1480), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 268/342 (78%), Positives = 306/342 (89%)

Query: 1   MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ 60
           MSST G ++ C+AAVAWEAGKPL+I++VEVAPPQA  VR+KI YTSLC TD+YFWE+KGQ
Sbjct: 1   MSSTEGKVICCRAAVAWEAGKPLVIEEVEVAPPQANVVRVKILYTSLCHTDVYFWEAKGQ 60

Query: 61  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 120
            PLFPRI+GHEA G+VESVGEGV+DL+ GDHVLPVFTGEC +C HC+S+ SNMCDLLRIN
Sbjct: 61  NPLFPRIYGHEAGGIVESVGEGVTDLKAGDHVLPVFTGECKECDHCKSEESNMCDLLRIN 120

Query: 121 PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 180
             RGVML DG+SRFSI G+P+ HF+GTSTFS YTV H GC+AKINP +PLDKVCILSCG+
Sbjct: 121 TDRGVMLNDGKSRFSIKGKPIYHFVGTSTFSVYTVTHVGCLAKINPQSPLDKVCILSCGI 180

Query: 181 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 240
           STGLGATLNV KP++GS+VAVFGLGAVGLAAAEGAR+AGASRIIGVD +S RFEEAKKFG
Sbjct: 181 STGLGATLNVRKPKKGSTVAVFGLGAVGLAAAEGARMAGASRIIGVDLNSNRFEEAKKFG 240

Query: 241 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 300
           +T+FVN  +H +P+QEVIAE+TNGGVDRS+ECTGNI  MI AFECVHDGWGVAVLVGVP 
Sbjct: 241 ITEFVNPKDHKKPVQEVIAELTNGGVDRSIECTGNIQAMIPAFECVHDGWGVAVLVGVPH 300

Query: 301 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 342
           KDAVF T P+N LNERTLKGTFFGNYKPRTD+PSVV+ YMNK
Sbjct: 301 KDAVFTTHPMNFLNERTLKGTFFGNYKPRTDIPSVVEKYMNK 342

This protein is responsible for the conversion of alcohols to aldehydes in plants and is important for NAD metabolism during anaerobic respiration.

Fragaria ananassa (taxid: 3747)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

>sp|P00333|ADH1_MAIZE Alcohol dehydrogenase 1 OS=Zea mays GN=ADH1 PE=2 SV=1

 Score =  574 bits (1479), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 267/340 (78%), Positives = 307/340 (90%)

Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           +TAG ++ CKAAVAWEAGKPL I++VEVAPPQAMEVR+KI +TSLC TD+YFWE+KGQTP
Sbjct: 2   ATAGKVIKCKAAVAWEAGKPLSIEEVEVAPPQAMEVRVKILFTSLCHTDVYFWEAKGQTP 61

Query: 63  LFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV 122
           +FPRIFGHEA G++ESVGEGV+D+  GDHVLPVFTGEC +C HC+S  SNMCDLLRIN  
Sbjct: 62  VFPRIFGHEAGGIIESVGEGVTDVAPGDHVLPVFTGECKECAHCKSAESNMCDLLRINTD 121

Query: 123 RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 182
           RGVM+ADG+SRFSING+P+ HF+GTSTFSEYTV+H GCVAKINP APLDKVC+LSCG ST
Sbjct: 122 RGVMIADGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPQAPLDKVCVLSCGYST 181

Query: 183 GLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 242
           GLGA++NVAKP +GS+VAVFGLGAVGLAAAEGARIAGASRIIGVD +  RFEEA+KFG T
Sbjct: 182 GLGASINVAKPPKGSTVAVFGLGAVGLAAAEGARIAGASRIIGVDLNPSRFEEARKFGCT 241

Query: 243 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 302
           +FVN  +H++P+QEV+AEMTNGGVDRSVECTGNI+ MI AFECVHDGWGVAVLVGVP KD
Sbjct: 242 EFVNPKDHNKPVQEVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKD 301

Query: 303 AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 342
           A F T P+N LNERTLKGTFFGNYKPRTDLP+VV++YM K
Sbjct: 302 AEFKTHPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKK 341

Zea mays (taxid: 4577)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	361
224093368	380	predicted protein [Populus trichocarpa]	0.958	0.910	0.806	1e-168
224093370	380	predicted protein [Populus trichocarpa]	0.958	0.910	0.803	1e-168
118487636	380	unknown [Populus trichocarpa]	0.958	0.910	0.806	1e-168
359477028	415	PREDICTED: alcohol dehydrogenase 1 [Viti	0.963	0.838	0.790	1e-167
225431501	380	PREDICTED: alcohol dehydrogenase 1 [Viti	0.958	0.910	0.797	1e-167
9885274	380	alcohol dehydrogenase 2 [Vitis vinifera]	0.947	0.9	0.801	1e-166
296088564	387	unnamed protein product [Vitis vinifera]	0.947	0.883	0.807	1e-166
225431505	380	PREDICTED: alcohol dehydrogenase 1 [Viti	0.947	0.9	0.804	1e-166
296088562	380	unnamed protein product [Vitis vinifera]	0.958	0.910	0.794	1e-166
71793966	380	alcohol dehydrogenase [Alnus glutinosa]	0.963	0.915	0.787	1e-166

>gi|224093368|ref|XP_002309899.1| predicted protein [Populus trichocarpa] gi|222852802|gb|EEE90349.1| predicted protein [Populus trichocarpa]

 Score =  596 bits (1537), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 279/346 (80%), Positives = 318/346 (91%)

Query: 1   MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ 60
           MSSTAG ++ CKAAVAWEAGKPL++++VEVAPPQAMEVR+KI +TSLC TD+YFWE+KGQ
Sbjct: 1   MSSTAGQVIRCKAAVAWEAGKPLVMEEVEVAPPQAMEVRLKILFTSLCHTDVYFWEAKGQ 60

Query: 61  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 120
           TPLFPRIFGHEA G+VESVGEGV+DL+ GDHVLPVFTGEC +CRHC+S+ SNMCDLLRIN
Sbjct: 61  TPLFPRIFGHEAGGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEESNMCDLLRIN 120

Query: 121 PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 180
             RGVML DG+SRFSI G+P+ HF+GTSTFSEYTVVH GCVAKINP APLDKVC+LSCG+
Sbjct: 121 TDRGVMLNDGKSRFSIKGQPIYHFVGTSTFSEYTVVHVGCVAKINPAAPLDKVCVLSCGI 180

Query: 181 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 240
           STGLGATLNVAKP++GSSVA+FGLGAVGLAAAEGARIAGASRIIGVD +S RF+EAKKFG
Sbjct: 181 STGLGATLNVAKPKKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNSNRFDEAKKFG 240

Query: 241 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 300
           VT+FVN  +H++P+QEVIAEMTNGGVDRSVECTG+I+ MISAFECVHDGWGVAVLVGVP+
Sbjct: 241 VTEFVNPKDHNKPVQEVIAEMTNGGVDRSVECTGSINAMISAFECVHDGWGVAVLVGVPN 300

Query: 301 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRF 346
           KD  F T P+NVLNERTLKGTFFGNYKPR+DLPSVV+ YMNK +  
Sbjct: 301 KDDSFKTHPMNVLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEL 346

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224093370|ref|XP_002309900.1| predicted protein [Populus trichocarpa] gi|222852803|gb|EEE90350.1| predicted protein [Populus trichocarpa]

 Score =  596 bits (1536), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 278/346 (80%), Positives = 318/346 (91%)

Query: 1   MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ 60
           MSSTAG ++ CKAAVAWEAGKPL+I++VEVAPPQAMEVR+KI +TSLC TD+YFWE+KGQ
Sbjct: 1   MSSTAGQVICCKAAVAWEAGKPLVIEEVEVAPPQAMEVRLKILFTSLCHTDVYFWEAKGQ 60

Query: 61  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 120
           TPLFPRIFGHEA G+VESVGEGV+DL+ GDHVLPVFTGEC +CRHC+S+ SNMCDLLRIN
Sbjct: 61  TPLFPRIFGHEAGGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEESNMCDLLRIN 120

Query: 121 PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 180
             RGVML DG+SRFSI G+P+ HF+GTSTFSEYTVVH GCVAKINP APLDKVC+LSCG+
Sbjct: 121 TDRGVMLNDGKSRFSIRGQPIYHFVGTSTFSEYTVVHVGCVAKINPAAPLDKVCVLSCGI 180

Query: 181 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 240
           STGLGATLNVAKP++GSS+A+FGLGAVGLAAAEGARIAGASRIIGVD +S RF+EAKKFG
Sbjct: 181 STGLGATLNVAKPKKGSSIAIFGLGAVGLAAAEGARIAGASRIIGVDLNSNRFDEAKKFG 240

Query: 241 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 300
           VT+FVN  +H++P+QEVIAEMTNGGVDRSVECTG+++ MISAFECVHDGWGVAVLVGVP+
Sbjct: 241 VTEFVNPKDHNKPVQEVIAEMTNGGVDRSVECTGSVNAMISAFECVHDGWGVAVLVGVPN 300

Query: 301 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRF 346
           KD  F T P+NVLNERTLKGTFFGNYKPR+DLPSVV+ YMNK +  
Sbjct: 301 KDDSFKTHPMNVLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEL 346

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118487636|gb|ABK95643.1| unknown [Populus trichocarpa]

 Score =  596 bits (1536), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 279/346 (80%), Positives = 318/346 (91%)

Query: 1   MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ 60
           MSSTAG ++ CKAAVAWEAGKPL+I++VEVAPPQAMEVR+KI +TSLC TD+YFWE+KGQ
Sbjct: 1   MSSTAGQVICCKAAVAWEAGKPLVIEEVEVAPPQAMEVRLKILFTSLCHTDVYFWEAKGQ 60

Query: 61  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 120
           TPLFPRIFGHEA G+VESVGEGV+DL+ GDHVLPVFTGEC +CRHC+S+ SNMCDLLRIN
Sbjct: 61  TPLFPRIFGHEAGGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEESNMCDLLRIN 120

Query: 121 PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 180
             RGVML DG+SRFSI G+P+ HF+GTSTFSEYTVVH GCVAKINP APLDKVC+LSCG+
Sbjct: 121 TDRGVMLNDGKSRFSIRGQPIYHFVGTSTFSEYTVVHVGCVAKINPAAPLDKVCVLSCGI 180

Query: 181 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 240
           STGLGATLNVAKP++GSSVA+FGLGAVGLAAAEGARIAGASRIIGVD +S RF+EAKKFG
Sbjct: 181 STGLGATLNVAKPKKGSSVAIFGLGAVGLAAAEGARIAGASRIIGVDLNSNRFDEAKKFG 240

Query: 241 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 300
           VT+FVN  +H++P+QEVIAEMTNGGVDRSVECTG+++ MISAFECVHDGWGVAVLVGVP+
Sbjct: 241 VTEFVNPKDHNKPVQEVIAEMTNGGVDRSVECTGSVNAMISAFECVHDGWGVAVLVGVPN 300

Query: 301 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRF 346
           KD  F T P+NVLNERTLKGTFFGNYKPR+DLPSVV+ YMNK +  
Sbjct: 301 KDDSFKTHPMNVLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEL 346

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359477028|ref|XP_002281349.2| PREDICTED: alcohol dehydrogenase 1 [Vitis vinifera]

 Score =  593 bits (1528), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 275/348 (79%), Positives = 315/348 (90%)

Query: 1   MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ 60
           MS TAG ++ CKAAVAWEAGKPL+I++VEVAPPQ MEVR+KI +TSLC TD+YFWE+KGQ
Sbjct: 36  MSGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQVMEVRLKILFTSLCHTDVYFWEAKGQ 95

Query: 61  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 120
           TPLFPRIFGHEA G+VESVGEGV+DL+ GDHVLPVFTGEC +CRHC+S+ SNMCDLLRIN
Sbjct: 96  TPLFPRIFGHEAGGIVESVGEGVTDLQSGDHVLPVFTGECKECRHCKSEESNMCDLLRIN 155

Query: 121 PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 180
             RGVML+D +SRFSING+P+ HF+GTSTFSEYTVVH GCVAKINP APLDKVC+LSCG+
Sbjct: 156 TDRGVMLSDNKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPAAPLDKVCVLSCGI 215

Query: 181 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 240
           STGLGATLNVAKP +GSSVA+FGLGAVGLAAAEGARIAGASRIIG+D + KRF +AKKFG
Sbjct: 216 STGLGATLNVAKPWKGSSVAIFGLGAVGLAAAEGARIAGASRIIGIDLNPKRFNDAKKFG 275

Query: 241 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 300
           VT+FVN  +HD+P+QEVIAEMT+GGVDRSVECTGN++ MISAFECVHDGWGVAVLVGVP+
Sbjct: 276 VTEFVNPKDHDKPVQEVIAEMTDGGVDRSVECTGNVNAMISAFECVHDGWGVAVLVGVPN 335

Query: 301 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRFSS 348
           KD  F T P+N+LNERTLKGTFFGNYKPR+DLPSVV+ YMNK +    
Sbjct: 336 KDDSFKTHPVNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELELEK 383

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225431501|ref|XP_002281334.1| PREDICTED: alcohol dehydrogenase 1 [Vitis vinifera] gi|296088563|emb|CBI37554.3| unnamed protein product [Vitis vinifera]

 Score =  592 bits (1527), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 276/346 (79%), Positives = 316/346 (91%)

Query: 1   MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ 60
           MSSTAG ++ CKAAVAWEAGKPL+I++VEVAPPQ MEVR+KI +TSLC TD+YFWE+KGQ
Sbjct: 1   MSSTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQVMEVRLKILFTSLCHTDVYFWEAKGQ 60

Query: 61  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 120
           TPLFPRIFGHEA G+VESVGEGV+DL+ GDHVLPVFTGEC +CRHC+S+ SNMCDLLRIN
Sbjct: 61  TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECRHCKSEESNMCDLLRIN 120

Query: 121 PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 180
             RGVML+D +SRFSING+P+ HF+GTSTFSEYTVVH GCVAKINP APLDKVC+LSCG+
Sbjct: 121 TDRGVMLSDNKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPAAPLDKVCVLSCGI 180

Query: 181 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 240
           STGLGATLNVAKP +GSSVA+FGLGAVGLAAAEGARIAGASRIIG+D + KRF +AKKFG
Sbjct: 181 STGLGATLNVAKPWKGSSVAIFGLGAVGLAAAEGARIAGASRIIGIDLNPKRFNDAKKFG 240

Query: 241 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 300
           VT+FVN  +HD+P+QEVIAEMT+GGVDRSVECTGN++ MISAFECVHDGWGVAVLVGVP+
Sbjct: 241 VTEFVNPKDHDKPVQEVIAEMTDGGVDRSVECTGNVNAMISAFECVHDGWGVAVLVGVPN 300

Query: 301 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRF 346
           KD  F T P+N+LNERTLKGTFFGNYKPR+DLPSVV+ YMNK +  
Sbjct: 301 KDDSFKTHPVNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEL 346

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|9885274|gb|AAG01382.1|AF194174_1 alcohol dehydrogenase 2 [Vitis vinifera] gi|18027092|gb|AAL55726.1|AF271074_1 alcohol dehydrogenase 2 [Vitis vinifera]

 Score =  592 bits (1525), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 274/342 (80%), Positives = 315/342 (92%)

Query: 1   MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ 60
           MSSTAG ++ CKAAVAWEAGKPL+I++VEVAPPQ MEVR+KI +TSLC TD+YFWE+KGQ
Sbjct: 1   MSSTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQVMEVRLKILFTSLCHTDVYFWEAKGQ 60

Query: 61  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 120
           TPLFPRIFGHEA G+VESVGEGV+DL+ GDHVLPVFTGEC +CRHC+S+ SNMCDLLRIN
Sbjct: 61  TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECRHCKSEESNMCDLLRIN 120

Query: 121 PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 180
             RGVML+D +SRFSING+PV HF+GTSTFSEYTV+H GCVAKINP APLDKVC+LSCG+
Sbjct: 121 TDRGVMLSDNKSRFSINGKPVYHFVGTSTFSEYTVIHVGCVAKINPAAPLDKVCVLSCGI 180

Query: 181 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 240
           STGLGATLNVAKP +GSS+A+FGLGAVGLAAAEGARIAGA+RIIG+D + KRF +AKKFG
Sbjct: 181 STGLGATLNVAKPSKGSSIAIFGLGAVGLAAAEGARIAGAARIIGIDLNPKRFNDAKKFG 240

Query: 241 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 300
           VT+F+N  +HD+PIQEVIAEMT+GGVDRSVECTGN++ MISAFECVHDGWGVAVLVGVP+
Sbjct: 241 VTEFLNPKDHDKPIQEVIAEMTDGGVDRSVECTGNVNAMISAFECVHDGWGVAVLVGVPN 300

Query: 301 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 342
           KD  F T P+N+LNERTLKGTFFGNYKPR+DLPSVV+ YMNK
Sbjct: 301 KDDSFKTHPVNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNK 342

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296088564|emb|CBI37555.3| unnamed protein product [Vitis vinifera]

 Score =  592 bits (1525), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 276/342 (80%), Positives = 313/342 (91%)

Query: 1   MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ 60
           MS TAG ++ CKAAVAWEAGKPL+I++VEVAPPQAMEVR+KI +TSLC TD+YFWE+KGQ
Sbjct: 1   MSGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQAMEVRLKILFTSLCHTDVYFWEAKGQ 60

Query: 61  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 120
           TPLFPRIFGHEA G+VESVGEGV+DL+ GDHVLPVFTGEC DCRHC+S+ SNMCDLLRIN
Sbjct: 61  TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKDCRHCKSEESNMCDLLRIN 120

Query: 121 PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 180
             RGVML D +SRFSING+P+ HF+GTSTFSEYTVVH GCVAKINP APLDKVC+LSCG+
Sbjct: 121 TDRGVMLNDNKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPAAPLDKVCVLSCGI 180

Query: 181 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 240
           STGLGATLNVA+P +GSSVA+FGLGAVGLAAAEGARIAGA+RIIG+D + KRF EAKKFG
Sbjct: 181 STGLGATLNVARPWKGSSVAIFGLGAVGLAAAEGARIAGAARIIGIDLNPKRFNEAKKFG 240

Query: 241 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 300
           VT+FVN  +HD+P+QEVIAEMT GGVDRSVECTGN++ MISAFECVHDGWGVAVLVGVP+
Sbjct: 241 VTEFVNPKDHDKPVQEVIAEMTGGGVDRSVECTGNVNAMISAFECVHDGWGVAVLVGVPN 300

Query: 301 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 342
           KD  F T P+N+LNERTLKGTFFGNYKPR+DLPSVV+ YMNK
Sbjct: 301 KDDSFKTHPVNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNK 342

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225431505|ref|XP_002281299.1| PREDICTED: alcohol dehydrogenase 1 [Vitis vinifera] gi|147826560|emb|CAN68504.1| hypothetical protein VITISV_039578 [Vitis vinifera] gi|296088565|emb|CBI37556.3| unnamed protein product [Vitis vinifera]

 Score =  591 bits (1524), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 275/342 (80%), Positives = 314/342 (91%)

Query: 1   MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ 60
           MSSTAG ++ CKAAVAWEAGKPL+I++VEVAPPQ MEVR+KI +TSLC TD+YFWE+KGQ
Sbjct: 1   MSSTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQVMEVRLKILFTSLCHTDVYFWEAKGQ 60

Query: 61  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 120
           TPLFPRIFGHEA G+VESVGEGV+DL+ GDHVLPVFTGEC +CRHC+S+ SNMCDLLRIN
Sbjct: 61  TPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECRHCKSEESNMCDLLRIN 120

Query: 121 PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 180
             RGVML+D +SRFSING+PV HF+GTSTFSEYTVVH GCVAKINP APLDKVC+LSCG+
Sbjct: 121 TDRGVMLSDNKSRFSINGKPVYHFVGTSTFSEYTVVHVGCVAKINPAAPLDKVCVLSCGI 180

Query: 181 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 240
           STGLGATLNVAKP +GSS+A+FGLGAVGLAAAEGARIAGA+RIIG+D + KRF +AKKFG
Sbjct: 181 STGLGATLNVAKPSKGSSIAIFGLGAVGLAAAEGARIAGAARIIGIDLNPKRFNDAKKFG 240

Query: 241 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 300
           VT+F+N  +HD+PIQEVIAEMT GGVDRSVECTGN++ MISAFECVHDGWGVAVLVGVP+
Sbjct: 241 VTEFLNPKDHDKPIQEVIAEMTGGGVDRSVECTGNVNAMISAFECVHDGWGVAVLVGVPN 300

Query: 301 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 342
           KD  F T P+N+LNERTLKGTFFGNYKPR+DLPSVV+ YMNK
Sbjct: 301 KDDSFKTHPVNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNK 342

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296088562|emb|CBI37553.3| unnamed protein product [Vitis vinifera]

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 275/346 (79%), Positives = 315/346 (91%)

Query: 1   MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ 60
           MS TAG ++ CKAAVAWEAGKPL+I++VEVAPPQ MEVR+KI +TSLC TD+YFWE+KGQ
Sbjct: 1   MSGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQVMEVRLKILFTSLCHTDVYFWEAKGQ 60

Query: 61  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 120
           TPLFPRIFGHEA G+VESVGEGV+DL+ GDHVLPVFTGEC +CRHC+S+ SNMCDLLRIN
Sbjct: 61  TPLFPRIFGHEAGGIVESVGEGVTDLQSGDHVLPVFTGECKECRHCKSEESNMCDLLRIN 120

Query: 121 PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 180
             RGVML+D +SRFSING+P+ HF+GTSTFSEYTVVH GCVAKINP APLDKVC+LSCG+
Sbjct: 121 TDRGVMLSDNKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPAAPLDKVCVLSCGI 180

Query: 181 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 240
           STGLGATLNVAKP +GSSVA+FGLGAVGLAAAEGARIAGASRIIG+D + KRF +AKKFG
Sbjct: 181 STGLGATLNVAKPWKGSSVAIFGLGAVGLAAAEGARIAGASRIIGIDLNPKRFNDAKKFG 240

Query: 241 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 300
           VT+FVN  +HD+P+QEVIAEMT+GGVDRSVECTGN++ MISAFECVHDGWGVAVLVGVP+
Sbjct: 241 VTEFVNPKDHDKPVQEVIAEMTDGGVDRSVECTGNVNAMISAFECVHDGWGVAVLVGVPN 300

Query: 301 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRF 346
           KD  F T P+N+LNERTLKGTFFGNYKPR+DLPSVV+ YMNK +  
Sbjct: 301 KDDSFKTHPVNLLNERTLKGTFFGNYKPRSDLPSVVEKYMNKELEL 346

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|71793966|emb|CAJ21172.1| alcohol dehydrogenase [Alnus glutinosa]

 Score =  591 bits (1523), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 274/348 (78%), Positives = 315/348 (90%)

Query: 1   MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ 60
           MSSTAG ++ CKAAVAWEAGKPL+I++VEVAPPQA EVR+KI +TSLC TD+YFWE+KGQ
Sbjct: 1   MSSTAGQVIKCKAAVAWEAGKPLVIEEVEVAPPQANEVRVKILFTSLCHTDVYFWEAKGQ 60

Query: 61  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 120
           TPLFPRIFGHEA G+VESVGEGV+DL++GDHVLPVFTGEC +CRHC+S+ SNMCDLLRIN
Sbjct: 61  TPLFPRIFGHEAGGIVESVGEGVTDLKLGDHVLPVFTGECKECRHCKSEESNMCDLLRIN 120

Query: 121 PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 180
             RGVML DG++RFSING+P+ HF+GTSTFSEYTV+H GC+AKINP APLDKVC+LSCG+
Sbjct: 121 TDRGVMLNDGKTRFSINGKPIYHFVGTSTFSEYTVIHVGCLAKINPAAPLDKVCVLSCGI 180

Query: 181 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 240
           STGLGATLNVAKP++G SVAVFGLGAVGLAAAEGARIAGASRIIGVD +  RFEEAKKFG
Sbjct: 181 STGLGATLNVAKPKKGQSVAVFGLGAVGLAAAEGARIAGASRIIGVDLNPARFEEAKKFG 240

Query: 241 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 300
           VT+FVN  +HD+P+QEV+AEMT+GGVDR+VECTG+I  MISAFECVHDGWGVAVLVGVPS
Sbjct: 241 VTEFVNPKDHDKPVQEVLAEMTDGGVDRAVECTGSIQAMISAFECVHDGWGVAVLVGVPS 300

Query: 301 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRFSS 348
           KD  F T P+N+LNERTLKGTFFGNYKPRTD+P VV+ YMNK +    
Sbjct: 301 KDDAFKTHPMNLLNERTLKGTFFGNYKPRTDIPGVVEKYMNKELELEK 348

Source: Alnus glutinosa

Species: Alnus glutinosa

Genus: Alnus

Family: Betulaceae

Order: Fagales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	361
TAIR|locus:2025237	379	ADH1 "alcohol dehydrogenase 1"	0.941	0.897	0.667	2.1e-123
TAIR|locus:2184575	381	AT5G24760 [Arabidopsis thalian	0.919	0.871	0.461	6.8e-79
ZFIN|ZDB-GENE-011003-1	376	adh5 "alcohol dehydrogenase 5"	0.936	0.898	0.424	1.1e-73
RGD|2292706	374	Adh5 "alcohol dehydrogenase 5	0.941	0.909	0.428	1.2e-72
UNIPROTKB|P12711	374	Adh5 "Alcohol dehydrogenase cl	0.941	0.909	0.428	1.2e-72
UNIPROTKB|P11766	374	ADH5 "Alcohol dehydrogenase cl	0.941	0.909	0.425	6.7e-72
UNIPROTKB|F1S0C1	374	ADH5 "Uncharacterized protein"	0.941	0.909	0.425	6.7e-72
UNIPROTKB|Q3ZC42	374	ADH5 "Alcohol dehydrogenase cl	0.941	0.909	0.422	1.4e-71
UNIPROTKB|J9PA83	374	ADH5 "Uncharacterized protein"	0.941	0.909	0.422	1.4e-71
UNIPROTKB|F1PLM5	376	F1PLM5 "Uncharacterized protei	0.933	0.896	0.423	2.3e-71

TAIR|locus:2025237 ADH1 "alcohol dehydrogenase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1213 (432.1 bits), Expect = 2.1e-123, P = 2.1e-123
 Identities = 227/340 (66%), Positives = 260/340 (76%)

Query:     3 STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
             ST G I+ CKAAVAWEAGKPL+I++VEVAPPQ  EVRIKI +TSLC TD+YFWE+KGQTP
Sbjct:     2 STTGQIIRCKAAVAWEAGKPLVIEEVEVAPPQKHEVRIKILFTSLCHTDVYFWEAKGQTP 61

Query:    63 LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV 122
             LFPRIFGH                    HVLP+FTGECG+CRHC S+ SNMCDLLRIN  
Sbjct:    62 LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPIFTGECGECRHCHSEESNMCDLLRINTE 121

Query:   123 RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 182
             RG M+ DG+SRFSING+P+ HFLGTSTFSEYTVVHSG VAKINP APLDKVCI+SCG+ST
Sbjct:   122 RGGMIHDGESRFSINGKPIYHFLGTSTFSEYTVVHSGQVAKINPDAPLDKVCIVSCGLST 181

Query:   183 GLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVT 242
             GLGATLNVAKP++                              VD +SKRF++AK+FGVT
Sbjct:   182 GLGATLNVAKPKKGQSVAIFGLGAVGLGAAEGARIAGASRIIGVDFNSKRFDQAKEFGVT 241

Query:   243 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 302
             + VN  +HD+PIQ+VIAEMT+GGVDRSVECTG++  MI AFECVHDGWGVAVLVGVPSKD
Sbjct:   242 ECVNPKDHDKPIQQVIAEMTDGGVDRSVECTGSVQAMIQAFECVHDGWGVAVLVGVPSKD 301

Query:   303 AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 342
               F T P+N LNERTLKGTFFGNYKP+TD+P VV+ YMNK
Sbjct:   302 DAFKTHPMNFLNERTLKGTFFGNYKPKTDIPGVVEKYMNK 341

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0045333 "cellular respiration" evidence=TAS

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0006970 "response to osmotic stress" evidence=IGI

GO:0001666 "response to hypoxia" evidence=IEP;RCA

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0009651 "response to salt stress" evidence=IEP

GO:0005829 "cytosol" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS;IMP

TAIR|locus:2184575 AT5G24760 [Arabidopsis thaliana (taxid:3702)]

 Score = 793 (284.2 bits), Expect = 6.8e-79, P = 6.8e-79
 Identities = 156/338 (46%), Positives = 209/338 (61%)

Query:     8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRI 67
             ++TC AAVAW AG+PL++++VEV+PPQ +E+RIK+  TSLCR+DL  WES+    L PRI
Sbjct:    13 VITCNAAVAWRAGEPLVMEEVEVSPPQPLEIRIKVVCTSLCRSDLSAWESQS---LLPRI 69

Query:    68 FGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVML 127
             FGH                    HVL VFTGECG CRHC S  SNMC +L +   +G+M 
Sbjct:    70 FGHEAAGIVESIGEGVTEFEKGDHVLAVFTGECGSCRHCISGKSNMCQVLGMER-KGLMH 128

Query:   128 ADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGAT 187
             +D ++RFSI G+PV H+   S+FSEYTVVHSGC  K++PLAPL K+C+LSCGV+ GLGA 
Sbjct:   129 SDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAA 188

Query:   188 LNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNT 247
              NVA  ++                              VD +  + E+AK FGVTDF+N+
Sbjct:   189 WNVADVQKGSSVVIFGLGTVGLSVAQGAKLRGAAQILGVDINPAKAEQAKTFGVTDFINS 248

Query:   248 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP-SKDAVFM 306
             ++   PI +VI  MT GG D S EC G+     +A +   DGWG+ V +GVP +K  V  
Sbjct:   249 NDLSEPIPQVIKRMTGGGADFSFECVGDTGIATTALQSCSDGWGMTVTLGVPKAKPEVSA 308

Query:   307 TKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVI 344
                +  L+ ++LKGT FG +KP++DLPS++D YMNK I
Sbjct:   309 HYGL-FLSGKSLKGTLFGGWKPKSDLPSLIDKYMNKEI 345

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009611 "response to wounding" evidence=RCA

GO:0009805 "coumarin biosynthetic process" evidence=RCA

ZFIN|ZDB-GENE-011003-1 adh5 "alcohol dehydrogenase 5" [Danio rerio (taxid:7955)]

 Score = 744 (267.0 bits), Expect = 1.1e-73, P = 1.1e-73
 Identities = 144/339 (42%), Positives = 196/339 (57%)

Query:     4 TAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL 63
             T G ++ CKAAVAWEAGKPL I++VEVAPP+A EVR+KI  T +C TD Y         L
Sbjct:     3 TTGKVIKCKAAVAWEAGKPLTIEEVEVAPPKAHEVRVKIHATGVCHTDAYTLSGSDPEGL 62

Query:    64 FPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVR 123
             FP I GH                     V+P++  +CG+C+ C++  +N+C  +R+   +
Sbjct:    63 FPVILGHEGAGTVESVGEGVTKFKPGDTVIPLYVPQCGECKFCKNPKTNLCQKIRVTQGQ 122

Query:   124 GVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 183
             G+M  D  SRF+  G+ + HF+GTSTFSEYTVV    +AK++  APLDKVC+L CG+STG
Sbjct:   123 GLM-PDNTSRFTCKGKQLFHFMGTSTFSEYTVVAEISLAKVDEHAPLDKVCLLGCGISTG 181

Query:   184 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 243
              GA +N AK E                               +D +  +FE AKKFG T+
Sbjct:   182 YGAAINTAKVEAGSTCAVFGLGAVGLAVVMGCKSAGATRIIGIDVNPDKFEIAKKFGATE 241

Query:   244 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 303
             FVN  +H +PIQEV+ E+T+GGVD S EC GN+  M +A E  H GWG +V++GV     
Sbjct:   242 FVNPKDHSKPIQEVLVELTDGGVDYSFECIGNVGIMRAALEACHKGWGTSVIIGVAGAGQ 301

Query:   304 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 342
                T+P  ++  RT KGT FG +K    +P +V+ YMNK
Sbjct:   302 EISTRPFQLVTGRTWKGTAFGGWKSVESVPKLVNDYMNK 340

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

RGD|2292706 Adh5 "alcohol dehydrogenase 5 (class III), chi polypeptide" [Rattus norvegicus (taxid:10116)]

 Score = 734 (263.4 bits), Expect = 1.2e-72, P = 1.2e-72
 Identities = 146/341 (42%), Positives = 197/341 (57%)

Query:     5 AGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF 64
             A  ++ CKAAVAWEAGKPL I+++EVAPPQA EVRIKI  T++C TD Y          F
Sbjct:     2 ANQVIRCKAAVAWEAGKPLSIEEIEVAPPQAHEVRIKIIATAVCHTDAYTLSGADPEGCF 61

Query:    65 PRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRG 124
             P I GH                     V+P++  +CG+C+ C +  +N+C  +R+   +G
Sbjct:    62 PVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 121

Query:   125 VMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGL 184
             +M  DG SRF+  G+P+ HF+GTSTFSEYTVV    VAKI+P APLDKVC+L CG+STG 
Sbjct:   122 LM-PDGTSRFTCKGKPILHFMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTGY 180

Query:   185 GATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDF 244
             GA +N AK E                               +D +  +F +AK+FG T+ 
Sbjct:   181 GAAVNTAKVEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGIDINKDKFAKAKEFGATEC 240

Query:   245 VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV 304
             +N  +  + IQEV+ EMT+GGVD S EC GN+  M SA E  H GWGV+V+VGV +    
Sbjct:   241 INPQDFSKSIQEVLIEMTDGGVDFSFECIGNVKVMRSALEAAHKGWGVSVVVGVAASGEE 300

Query:   305 FMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIR 345
               T+P  ++  RT KGT FG +K    +P +V  YM+K I+
Sbjct:   301 ISTRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIK 341

GO:0000166 "nucleotide binding" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IEA;ISO

GO:0003016 "respiratory system process" evidence=IEA;ISO

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA;ISO;IDA

GO:0005504 "fatty acid binding" evidence=IEA;ISO

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005739 "mitochondrion" evidence=IEA;ISO

GO:0006068 "ethanol catabolic process" evidence=IDA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0007568 "aging" evidence=IEP

GO:0008270 "zinc ion binding" evidence=IEA;ISO

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IEA;ISO

GO:0018467 "formaldehyde dehydrogenase activity" evidence=IEA;ISO

GO:0032496 "response to lipopolysaccharide" evidence=IEA;ISO

GO:0042803 "protein homodimerization activity" evidence=IEA;ISO

GO:0045777 "positive regulation of blood pressure" evidence=IEA;ISO

GO:0046294 "formaldehyde catabolic process" evidence=IEA;ISO

GO:0051409 "response to nitrosative stress" evidence=IEA;ISO

GO:0051775 "response to redox state" evidence=IEA;ISO

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA;ISO

GO:0055114 "oxidation-reduction process" evidence=ISO

UNIPROTKB|P12711 Adh5 "Alcohol dehydrogenase class-3" [Rattus norvegicus (taxid:10116)]

 Score = 734 (263.4 bits), Expect = 1.2e-72, P = 1.2e-72
 Identities = 146/341 (42%), Positives = 197/341 (57%)

Query:     5 AGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF 64
             A  ++ CKAAVAWEAGKPL I+++EVAPPQA EVRIKI  T++C TD Y          F
Sbjct:     2 ANQVIRCKAAVAWEAGKPLSIEEIEVAPPQAHEVRIKIIATAVCHTDAYTLSGADPEGCF 61

Query:    65 PRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRG 124
             P I GH                     V+P++  +CG+C+ C +  +N+C  +R+   +G
Sbjct:    62 PVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 121

Query:   125 VMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGL 184
             +M  DG SRF+  G+P+ HF+GTSTFSEYTVV    VAKI+P APLDKVC+L CG+STG 
Sbjct:   122 LM-PDGTSRFTCKGKPILHFMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTGY 180

Query:   185 GATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDF 244
             GA +N AK E                               +D +  +F +AK+FG T+ 
Sbjct:   181 GAAVNTAKVEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGIDINKDKFAKAKEFGATEC 240

Query:   245 VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV 304
             +N  +  + IQEV+ EMT+GGVD S EC GN+  M SA E  H GWGV+V+VGV +    
Sbjct:   241 INPQDFSKSIQEVLIEMTDGGVDFSFECIGNVKVMRSALEAAHKGWGVSVVVGVAASGEE 300

Query:   305 FMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIR 345
               T+P  ++  RT KGT FG +K    +P +V  YM+K I+
Sbjct:   301 ISTRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIK 341

GO:0000166 "nucleotide binding" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0005504 "fatty acid binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IEA

GO:0018467 "formaldehyde dehydrogenase activity" evidence=IEA

GO:0032496 "response to lipopolysaccharide" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0045777 "positive regulation of blood pressure" evidence=IEA

GO:0046294 "formaldehyde catabolic process" evidence=IEA

GO:0051409 "response to nitrosative stress" evidence=IEA

GO:0051775 "response to redox state" evidence=IEA

UNIPROTKB|P11766 ADH5 "Alcohol dehydrogenase class-3" [Homo sapiens (taxid:9606)]

 Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
 Identities = 145/341 (42%), Positives = 197/341 (57%)

Query:     5 AGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF 64
             A  ++ CKAAVAWEAGKPL I+++EVAPP+A EVRIKI  T++C TD Y          F
Sbjct:     2 ANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCF 61

Query:    65 PRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRG 124
             P I GH                     V+P++  +CG+C+ C +  +N+C  +R+   +G
Sbjct:    62 PVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 121

Query:   125 VMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGL 184
             +M  DG SRF+  G+ + H++GTSTFSEYTVV    VAKI+PLAPLDKVC+L CG+STG 
Sbjct:   122 LM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGY 180

Query:   185 GATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDF 244
             GA +N AK E                               VD +  +F  AK+FG T+ 
Sbjct:   181 GAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATEC 240

Query:   245 VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV 304
             +N  +  +PIQEV+ EMT+GGVD S EC GN+  M +A E  H GWGV+V+VGV +    
Sbjct:   241 INPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEE 300

Query:   305 FMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIR 345
               T+P  ++  RT KGT FG +K    +P +V  YM+K I+
Sbjct:   301 IATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIK 341

GO:0000166 "nucleotide binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA

GO:0006068 "ethanol catabolic process" evidence=IEA

GO:0007568 "aging" evidence=IEA

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IEA

GO:0032496 "response to lipopolysaccharide" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0045777 "positive regulation of blood pressure" evidence=IEA

GO:0046294 "formaldehyde catabolic process" evidence=IEA

GO:0051409 "response to nitrosative stress" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0009055 "electron carrier activity" evidence=TAS

GO:0008270 "zinc ion binding" evidence=IDA

GO:0005504 "fatty acid binding" evidence=IDA

GO:0051775 "response to redox state" evidence=IDA

GO:0018467 "formaldehyde dehydrogenase activity" evidence=IDA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=TAS

UNIPROTKB|F1S0C1 ADH5 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
 Identities = 145/341 (42%), Positives = 197/341 (57%)

Query:     5 AGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF 64
             A  ++ CKAAVAWEAGKPL I+++EVAPP+A EVRIKI  T++C TD Y          F
Sbjct:     2 ANQVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSF 61

Query:    65 PRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRG 124
             P I GH                     V+P++  +CG+C+ C +  +N+C  +R+   +G
Sbjct:    62 PVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 121

Query:   125 VMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGL 184
             +M  DG SRF+  G+ + H++GTSTFSEYTVV    VAKI+PLAPLDKVC+L CGVSTG 
Sbjct:   122 LM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGY 180

Query:   185 GATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDF 244
             GA +N AK E                               VD +  +F  AK+FG ++ 
Sbjct:   181 GAAVNTAKVEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGASEC 240

Query:   245 VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV 304
             +N  +  +PIQEV+ EMT+GGVD S EC GN+  M +A E  H GWGV+V+VGV +    
Sbjct:   241 INPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEE 300

Query:   305 FMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIR 345
               T+P  ++  RT KGT FG +K    +P +V  YM+K I+
Sbjct:   301 IATRPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIK 341

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

GO:0051775 "response to redox state" evidence=IEA

GO:0051409 "response to nitrosative stress" evidence=IEA

GO:0046294 "formaldehyde catabolic process" evidence=IEA

GO:0045777 "positive regulation of blood pressure" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0032496 "response to lipopolysaccharide" evidence=IEA

GO:0018467 "formaldehyde dehydrogenase activity" evidence=IEA

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005504 "fatty acid binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q3ZC42 ADH5 "Alcohol dehydrogenase class-3" [Bos taurus (taxid:9913)]

 Score = 724 (259.9 bits), Expect = 1.4e-71, P = 1.4e-71
 Identities = 144/341 (42%), Positives = 197/341 (57%)

Query:     5 AGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF 64
             A  ++ CKAAVAWEAGKPL I++VEVAPP+A EVRIKI  T++C TD Y          +
Sbjct:     2 ANQVIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGNY 61

Query:    65 PRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRG 124
             P I GH                     V+P++  +CG+C+ C +  +N+C  +R+   +G
Sbjct:    62 PVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 121

Query:   125 VMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGL 184
             +M  DG SRF+  G+ + H++GTSTFSEYTVV    VAKI+PLAPLDKVC+L CG+STG 
Sbjct:   122 LM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGY 180

Query:   185 GATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDF 244
             GA LN AK E                               VD +  +F  AK+FG ++ 
Sbjct:   181 GAALNAAKVEPGSTCAVFGLGGVGLAVIMGCKMAGAARIIGVDINKDKFARAKEFGASEC 240

Query:   245 VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV 304
             +N  +  +PIQEV+ EMT+GGVD S EC GN+  M +A E  H GWG++V+VGV +    
Sbjct:   241 INPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGISVVVGVAASGEE 300

Query:   305 FMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIR 345
               T+P  ++  RT KGT FG +K    +P +V  YM+K I+
Sbjct:   301 IATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIK 341

GO:0051775 "response to redox state" evidence=IEA

GO:0051409 "response to nitrosative stress" evidence=IEA

GO:0046294 "formaldehyde catabolic process" evidence=IEA

GO:0045777 "positive regulation of blood pressure" evidence=IEA

GO:0042803 "protein homodimerization activity" evidence=IEA

GO:0032496 "response to lipopolysaccharide" evidence=IEA

GO:0018467 "formaldehyde dehydrogenase activity" evidence=IEA

GO:0018119 "peptidyl-cysteine S-nitrosylation" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005504 "fatty acid binding" evidence=IEA

GO:0003016 "respiratory system process" evidence=IEA

GO:0001523 "retinoid metabolic process" evidence=IEA

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|J9PA83 ADH5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 724 (259.9 bits), Expect = 1.4e-71, P = 1.4e-71
 Identities = 144/341 (42%), Positives = 196/341 (57%)

Query:     5 AGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF 64
             A  ++ CKAAVAWEAGKPL I++VEVAPP+A EVRIKI  T++C TD Y          F
Sbjct:     2 ANQVIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSF 61

Query:    65 PRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRG 124
             P I GH                     V+P++  +CG+C+ C +  +N+C  +R+   +G
Sbjct:    62 PVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 121

Query:   125 VMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGL 184
             +M  DG SRF+  G+ + H++GTSTFSEYTVV    VAKI+PLAPLDKVC+L CG+STG 
Sbjct:   122 LM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGY 180

Query:   185 GATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDF 244
             GA LN AK E                               VD +  +F  AK+FG ++ 
Sbjct:   181 GAALNTAKVEPGSTCAVFGLGGVGLATIMGCKVAGASRIIGVDINKDKFSRAKEFGASEC 240

Query:   245 VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV 304
             +N  +  +PIQEV+ EMT+GGVD S EC GN+  M +A E  H GWGV+V+VGV +    
Sbjct:   241 INPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVIVGVAASGEE 300

Query:   305 FMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIR 345
               T+P  ++  R  KGT FG +K    +P +V  YM++ I+
Sbjct:   301 IATRPFQLVTGRVWKGTAFGGWKSVESVPKLVSEYMSRKIK 341

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|F1PLM5 F1PLM5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
 Identities = 143/338 (42%), Positives = 195/338 (57%)

Query:     8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRI 67
             ++ CKAAVAWEAGKPL I++VEVAPP+A EVRIKI  T++C TD Y          FP I
Sbjct:     7 VIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSFPVI 66

Query:    68 FGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVML 127
              GH                     V+P++  +CG+C+ C +  +N+C  +R+   +G+M 
Sbjct:    67 LGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM- 125

Query:   128 ADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGAT 187
              DG SRF+  G+ + H++GTSTFSEYTVV    VAKI+PLAPLDKVC+L CG+STG GA 
Sbjct:   126 PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAA 185

Query:   188 LNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNT 247
             LN AK E                               VD +  +F  AK+FG ++ +N 
Sbjct:   186 LNTAKVEPGSTCAVFGLGGVGLATIMGCKVAGASRIIGVDINKDKFSRAKEFGASECINP 245

Query:   248 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMT 307
              +  +PIQEV+ EMT+GGVD S EC GN+  M +A E  H GWGV+V+VGV +      T
Sbjct:   246 QDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVIVGVAASGEEIAT 305

Query:   308 KPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIR 345
             +P  ++  R  KGT FG +K    +P +V  YM++ I+
Sbjct:   306 RPFQLVTGRVWKGTAFGGWKSVESVPKLVSEYMSRKIK 343

GO:0051903 "S-(hydroxymethyl)glutathione dehydrogenase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006069 "ethanol oxidation" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q2R8Z5	ADH1_ORYSJ	1, ., 1, ., 1, ., 1	0.7823	0.9418	0.8970	yes	no
P80467	ADHX_UROHA	1, ., 1, ., 1, ., 2, 8, 4	0.5236	0.9335	0.9034	N/A	no
O19053	ADHX_RABIT	1, ., 1, ., 1, ., 2, 8, 4	0.5249	0.9418	0.9090	yes	no
P06525	ADH1_ARATH	1, ., 1, ., 1, ., 1	0.7797	0.9556	0.9102	yes	no
P19854	ADHX_HORSE	1, ., 1, ., 1, ., 2, 8, 4	0.5266	0.9335	0.9010	yes	no
P14674	ADH2_SOLTU	1, ., 1, ., 1, ., 1	0.7832	0.9584	0.9105	N/A	no
P14675	ADH3_SOLTU	1, ., 1, ., 1, ., 1	0.7832	0.9584	0.9105	N/A	no
A2XAZ3	ADHX_ORYSI	1, ., 1, ., 1, ., 2, 8, 4	0.5930	0.9529	0.9028	N/A	no
P14673	ADH1_SOLTU	1, ., 1, ., 1, ., 1	0.7832	0.9584	0.9105	N/A	no
P12711	ADHX_RAT	1, ., 1, ., 1, ., 2, 8, 4	0.5307	0.9418	0.9090	yes	no
P86884	ADHX_SCYCA	1, ., 1, ., 1, ., 2, 8, 4	0.5058	0.9501	0.9122	N/A	no
P81601	ADHL_GADMO	1, ., 1, ., 1, ., 2, 8, 4	0.5072	0.9473	0.912	N/A	no
P28032	ADH2_SOLLC	1, ., 1, ., 1, ., 1	0.7803	0.9584	0.9105	N/A	no
P93629	ADHX_MAIZE	1, ., 1, ., 1, ., 2, 8, 4	0.5813	0.9529	0.9028	N/A	no
P48977	ADH_MALDO	1, ., 1, ., 1, ., 1	0.7803	0.9584	0.9105	N/A	no
P00333	ADH1_MAIZE	1, ., 1, ., 1, ., 1	0.7852	0.9418	0.8970	N/A	no
P80572	ADHX_PEA	1, ., 1, ., 1, ., 2, 8, 4	0.5714	0.9501	0.9074	N/A	no
Q4R1E8	ADH2_ORYSI	1, ., 1, ., 1, ., 1	0.7341	0.9584	0.9129	N/A	no
Q17335	ADHX_CAEEL	1, ., 1, ., 1, ., 2, 8, 4	0.4826	0.9445	0.8880	yes	no
Q3ZC42	ADHX_BOVIN	1, ., 1, ., 1, ., 2, 8, 4	0.5219	0.9418	0.9090	yes	no
P46415	ADHX_DROME	1, ., 1, ., 1, ., 2, 8, 4	0.4883	0.9445	0.8997	yes	no
P11766	ADHX_HUMAN	1, ., 1, ., 1, ., 2, 8, 4	0.5278	0.9418	0.9090	yes	no
P25141	ADH1_PETHY	1, ., 1, ., 1, ., 1	0.7687	0.9556	0.9031	N/A	no
P05336	ADH1_HORVU	1, ., 1, ., 1, ., 1	0.7647	0.9418	0.8970	N/A	no
P79896	ADHX_SPAAU	1, ., 1, ., 1, ., 2, 8, 4	0.5233	0.9445	0.9069	N/A	no
P81600	ADHH_GADMO	1, ., 1, ., 1, ., 2, 8, 4	0.5131	0.9473	0.912	N/A	no
P12886	ADH1_PEA	1, ., 1, ., 1, ., 1	0.7313	0.9889	0.9394	N/A	no
P13603	ADH1_TRIRP	1, ., 1, ., 1, ., 1	0.7154	0.9889	0.9394	N/A	no
P17648	ADH_FRAAN	1, ., 1, ., 1, ., 1	0.7836	0.9473	0.9	N/A	no
P04707	ADH2_MAIZE	1, ., 1, ., 1, ., 1	0.7427	0.9584	0.9129	N/A	no
P14219	ADH1_PENAM	1, ., 1, ., 1, ., 1	0.7823	0.9418	0.8970	N/A	no
P28474	ADHX_MOUSE	1, ., 1, ., 1, ., 2, 8, 4	0.5219	0.9418	0.9090	yes	no
Q54TC2	ADHX_DICDI	1, ., 1, ., 1, ., 2, 8, 4	0.4942	0.9473	0.9023	yes	no
P26325	ADH1_GADMC	1, ., 1, ., 1, ., 1	0.5087	0.9473	0.912	N/A	no
Q0ITW7	ADH2_ORYSJ	1, ., 1, ., 1, ., 1	0.7341	0.9584	0.9129	no	no
Q75ZX4	ADH1_ORYSI	1, ., 1, ., 1, ., 1	0.7823	0.9418	0.8970	N/A	no
P10847	ADH2_HORVU	1, ., 1, ., 1, ., 1	0.7167	0.9418	0.9115	N/A	no
Q07264	ADH1_ZEALU	1, ., 1, ., 1, ., 1	0.7835	0.7423	0.9146	N/A	no
P10848	ADH3_HORVU	1, ., 1, ., 1, ., 1	0.7647	0.9418	0.8970	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.983
4th Layer	1.1.1.1	0.979

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	361
cd08301	369	cd08301, alcohol_DH_plants, Plant alcohol dehydrog	0.0
cd08277	365	cd08277, liver_alcohol_DH_like, Liver alcohol dehy	1e-179
cd08300	368	cd08300, alcohol_DH_class_III, class III alcohol d	1e-171
PLN02740	381	PLN02740, PLN02740, Alcohol dehydrogenase-like	1e-160
PLN02827	378	PLN02827, PLN02827, Alcohol dehydrogenase-like	1e-153
cd08299	373	cd08299, alcohol_DH_class_I_II_IV, class I, II, IV	1e-149
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	1e-141
TIGR02818	368	TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat	1e-137
cd05279	365	cd05279, Zn_ADH1, Liver alcohol dehydrogenase and	1e-134
cd08279	363	cd08279, Zn_ADH_class_III, Class III alcohol dehyd	1e-114
cd08278	365	cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro	3e-94
cd08281	371	cd08281, liver_ADH_like1, Zinc-dependent alcohol d	2e-85
TIGR03989	369	TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa	1e-79
TIGR03451	358	TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi	2e-67
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	3e-66
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	6e-58
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	1e-52
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	5e-52
cd08233	351	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio	1e-46
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	4e-46
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	1e-45
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	2e-44
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	4e-43
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	1e-41
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	9e-41
cd08239	339	cd08239, THR_DH_like, L-threonine dehydrogenase (T	2e-40
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	2e-40
cd08231	361	cd08231, MDR_TM0436_like, Hypothetical enzyme TM04	5e-40
cd08235	343	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas	2e-39
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	6e-39
cd08285	351	cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd	9e-38
cd08283	386	cd08283, FDH_like_1, Glutathione-dependent formald	9e-38
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	2e-37
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	2e-36
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	8e-36
cd05281	341	cd05281, TDH, Threonine dehydrogenase	1e-35
cd08240	350	cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa	2e-35
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	4e-33
cd08284	344	cd08284, FDH_like_2, Glutathione-dependent formald	3e-32
cd08286	345	cd08286, FDH_like_ADH2, formaldehyde dehydrogenase	4e-32
cd08282	375	cd08282, PFDH_like, Pseudomonas putida aldehyde-di	6e-32
PRK05396	341	PRK05396, tdh, L-threonine 3-dehydrogenase; Valida	5e-30
cd08287	345	cd08287, FDH_like_ADH3, formaldehyde dehydrogenase	5e-30
cd08298	329	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA	1e-28
TIGR00692	340	TIGR00692, tdh, L-threonine 3-dehydrogenase	4e-28
cd05283	337	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA	6e-27
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	7e-27
pfam08240	108	pfam08240, ADH_N, Alcohol dehydrogenase GroES-like	2e-26
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	5e-26
cd08296	333	cd08296, CAD_like, Cinnamyl alcohol dehydrogenases	1e-25
cd08265	384	cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD	2e-25
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	6e-25
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	5e-24
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	1e-23
TIGR03366	280	TIGR03366, HpnZ_proposed, putative phosphonate cat	4e-23
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	4e-22
PRK10083	339	PRK10083, PRK10083, putative oxidoreductase; Provi	4e-21
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	2e-20
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	6e-20
PRK09422	338	PRK09422, PRK09422, ethanol-active dehydrogenase/a	6e-19
PLN02702	364	PLN02702, PLN02702, L-idonate 5-dehydrogenase	2e-18
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	6e-18
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	4e-17
cd08256	350	cd08256, Zn_ADH2, Alcohol dehydrogenases of the MD	5e-17
PRK10309	347	PRK10309, PRK10309, galactitol-1-phosphate dehydro	5e-16
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	1e-15
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	1e-15
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	2e-15
TIGR03201	349	TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1	7e-15
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	5e-14
cd08242	319	cd08242, MDR_like, Medium chain dehydrogenases/red	8e-14
PLN02514	357	PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase	9e-14
TIGR02819	393	TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenas	1e-13
cd08230	355	cd08230, glucose_DH, Glucose dehydrogenase	2e-13
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	3e-13
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	2e-12
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	3e-12
cd08262	341	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD	3e-12
PLN02586	360	PLN02586, PLN02586, probable cinnamyl alcohol dehy	8e-12
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	7e-11
PLN02178	375	PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase	7e-11
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	2e-09
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	2e-09
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	3e-09
PRK09880	343	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Pro	9e-09
TIGR02822	329	TIGR02822, adh_fam_2, zinc-binding alcohol dehydro	3e-08
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	4e-08
cd08292	324	cd08292, ETR_like_2, 2-enoyl thioester reductase (	7e-08
cd08251	303	cd08251, polyketide_synthase, polyketide synthase	1e-07
cd08275	337	cd08275, MDR3, Medium chain dehydrogenases/reducta	2e-07
cd08247	352	cd08247, AST1_like, AST1 is a cytoplasmic protein	3e-07
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	7e-07
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	7e-07
cd08252	336	cd08252, AL_MDR, Arginate lyase and other MDR fami	2e-06
PRK10754	327	PRK10754, PRK10754, quinone oxidoreductase, NADPH-	2e-06
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	2e-06
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	1e-05
smart00829	287	smart00829, PKS_ER, Enoylreductase	2e-05
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	2e-05
TIGR02824	325	TIGR02824, quinone_pig3, putative NAD(P)H quinone	4e-05
cd08248	350	cd08248, RTN4I1, Human Reticulon 4 Interacting Pro	4e-04
cd08246	393	cd08246, crotonyl_coA_red, crotonyl-CoA reductase	4e-04
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	5e-04
cd08291	324	cd08291, ETR_like_1, 2-enoyl thioester reductase (	8e-04

>gnl|CDD|176261 cd08301, alcohol_DH_plants, Plant alcohol dehydrogenase

 Score =  655 bits (1693), Expect = 0.0
 Identities = 262/337 (77%), Positives = 300/337 (89%)

Query: 9   LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIF 68
           +TCKAAVAWEAGKPL+I++VEVAPPQAMEVRIKI +TSLC TD+YFWE+KGQTPLFPRI 
Sbjct: 1   ITCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRIL 60

Query: 69  GHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLA 128
           GHEAAG+VESVGEGV+DL+ GDHVLPVFTGEC +CRHC+S+ SNMCDLLRIN  RGVM+ 
Sbjct: 61  GHEAAGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMIN 120

Query: 129 DGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL 188
           DG+SRFSING+P+ HF+GTSTFSEYTVVH GCVAKINP APLDKVC+LSCGVSTGLGA  
Sbjct: 121 DGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEAPLDKVCLLSCGVSTGLGAAW 180

Query: 189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 248
           NVAK ++GS+VA+FGLGAVGLA AEGARI GASRIIGVD +  +FE+AKKFGVT+FVN  
Sbjct: 181 NVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPK 240

Query: 249 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK 308
           +HD+P+QEVIAEMT GGVD S ECTGNID MISAFECVHDGWGV VL+GVP KDAVF T 
Sbjct: 241 DHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTH 300

Query: 309 PINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIR 345
           P+N+LN RTLKGT FG YKP+TDLP++V+ YM K + 
Sbjct: 301 PMNLLNGRTLKGTLFGGYKPKTDLPNLVEKYMKKELE 337

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 369

>gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase

 Score =  501 bits (1291), Expect = e-179
 Identities = 191/334 (57%), Positives = 242/334 (72%), Gaps = 4/334 (1%)

Query: 9   LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIF 68
           + CKAAVAWEAGKPL+I+++EVAPP+A EVRIK+  TS+C TD+   E    T  FP I 
Sbjct: 1   IKCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKATL-FPVIL 59

Query: 69  GHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLA 128
           GHE AG+VESVGEGV++L+ GD V+P+F G+CG+C +CRS  +N+C   R N     ++ 
Sbjct: 60  GHEGAGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANE--SGLMP 117

Query: 129 DGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL 188
           DG SRF+  G+ + HFLGTSTFS+YTVV    VAKI+P APL+ VC+L CG STG GA  
Sbjct: 118 DGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAAW 177

Query: 189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 248
           N AK E GS+VAVFGLGAVGL+A  GA+IAGASRIIGVD +  +FE+AK+FG TDF+N  
Sbjct: 178 NTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPK 237

Query: 249 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK 308
           + D+P+ EVI EMT GGVD S ECTGN D M  A E    GWGV+V+VGVP    +   +
Sbjct: 238 DSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAEL-SIR 296

Query: 309 PINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 342
           P  ++  RT KG+FFG +K R+D+P +V  YMNK
Sbjct: 297 PFQLILGRTWKGSFFGGFKSRSDVPKLVSKYMNK 330

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176260 cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases

 Score =  481 bits (1240), Expect = e-171
 Identities = 192/337 (56%), Positives = 244/337 (72%), Gaps = 1/337 (0%)

Query: 9   LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIF 68
           +TCKAAVAWEAGKPL I++VEVAPP+A EVRIKI  T +C TD Y         LFP I 
Sbjct: 1   ITCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVIL 60

Query: 69  GHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLA 128
           GHE AG+VESVGEGV+ ++ GDHV+P++T ECG+C+ C+S  +N+C  +R    +G+M  
Sbjct: 61  GHEGAGIVESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLM-P 119

Query: 129 DGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL 188
           DG SRFS  G+P+ HF+GTSTFSEYTVV    VAKINP APLDKVC+L CGV+TG GA L
Sbjct: 120 DGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAPLDKVCLLGCGVTTGYGAVL 179

Query: 189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 248
           N AK E GS+VAVFGLGAVGLA  +GA+ AGASRIIG+D +  +FE AKKFG TD VN  
Sbjct: 180 NTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPK 239

Query: 249 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK 308
           +HD+PIQ+V+ EMT+GGVD + EC GN+  M +A E  H GWG +V++GV +      T+
Sbjct: 240 DHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTR 299

Query: 309 PINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIR 345
           P  ++  R  KGT FG +K R+ +P +V+ YM   I+
Sbjct: 300 PFQLVTGRVWKGTAFGGWKSRSQVPKLVEDYMKGKIK 336

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 368

>gnl|CDD|178341 PLN02740, PLN02740, Alcohol dehydrogenase-like

 Score =  454 bits (1170), Expect = e-160
 Identities = 186/349 (53%), Positives = 254/349 (72%), Gaps = 7/349 (2%)

Query: 1   MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ 60
            S T G ++TCKAAVAW  G+PL+++++ V PPQ MEVRIKI YTS+C TDL  W  KG+
Sbjct: 1   ASETQGKVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAW--KGE 58

Query: 61  TPL---FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLL 117
                 +PRI GHEAAG+VESVGEGV DL+ GDHV+P+F GECGDCR+C+ D +N+C+  
Sbjct: 59  NEAQRAYPRILGHEAAGIVESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETY 118

Query: 118 RINPVRGVMLADGQSRFSI--NGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI 175
           R++P + VM+ DG++RFS   +G+P+ HFL TSTF+EYTV+ S CV KI+P APL K+ +
Sbjct: 119 RVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKIDPNAPLKKMSL 178

Query: 176 LSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE 235
           LSCGVSTG+GA  N A  + GSSVA+FGLGAVGLA AEGAR  GAS+IIGVD + ++FE+
Sbjct: 179 LSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEK 238

Query: 236 AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVL 295
            K+ G+TDF+N  + D+P+ E I EMT GGVD S EC GN++ +  AF   HDGWG+ VL
Sbjct: 239 GKEMGITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVL 298

Query: 296 VGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVI 344
           +G+     +    P+ + + R++ G+ FG++K ++ LP++    M  V+
Sbjct: 299 LGIHPTPKMLPLHPMELFDGRSITGSVFGDFKGKSQLPNLAKQCMQGVV 347

Length = 381

>gnl|CDD|215442 PLN02827, PLN02827, Alcohol dehydrogenase-like

 Score =  435 bits (1119), Expect = e-153
 Identities = 191/337 (56%), Positives = 250/337 (74%), Gaps = 4/337 (1%)

Query: 8   ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRI 67
           ++TC+AAVAW AG+ L++++VEV+PPQ +E+RIK+  TSLCR+DL  WES+    LFPRI
Sbjct: 10  VITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQ---ALFPRI 66

Query: 68  FGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVML 127
           FGHEA+G+VES+GEGV++ E GDHVL VFTGECG CRHC S  SNMC +L +   +GVM 
Sbjct: 67  FGHEASGIVESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLER-KGVMH 125

Query: 128 ADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGAT 187
           +D ++RFSI G+PV H+   S+FSEYTVVHSGC  K++PLAPL K+C+LSCGV+ GLGA 
Sbjct: 126 SDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAA 185

Query: 188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 247
            NVA   +GSSV +FGLG VGL+ A+GA++ GAS+IIGVD + ++ E+AK FGVTDF+N 
Sbjct: 186 WNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINP 245

Query: 248 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMT 307
           ++   PIQ+VI  MT GG D S EC G+     +A +   DGWG+ V +GVP        
Sbjct: 246 NDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSA 305

Query: 308 KPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVI 344
                L+ RTLKG+ FG +KP++DLPS+VD YMNK I
Sbjct: 306 HYGLFLSGRTLKGSLFGGWKPKSDLPSLVDKYMNKEI 342

Length = 378

>gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases

 Score =  424 bits (1092), Expect = e-149
 Identities = 174/339 (51%), Positives = 230/339 (67%), Gaps = 2/339 (0%)

Query: 4   TAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL 63
           TAG ++ CKAAV WE  KP  I+++EVAPP+A EVRIKI  T +CR+D +    K  TP 
Sbjct: 1   TAGKVIKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLVTP- 59

Query: 64  FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVR 123
           FP I GHEAAG+VESVGEGV+ ++ GD V+P+F  +CG CR C +  SN+C    +   +
Sbjct: 60  FPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQ 119

Query: 124 GVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 183
           G+M  DG SRF+  G+P++HFLGTSTFSEYTVV    VAKI+  APL+KVC++ CG STG
Sbjct: 120 GLM-QDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAAPLEKVCLIGCGFSTG 178

Query: 184 LGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD 243
            GA +N AK   GS+ AVFGLG VGL+A  G + AGASRII VD +  +F +AK+ G T+
Sbjct: 179 YGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATE 238

Query: 244 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 303
            +N  ++ +PIQEV+ EMT+GGVD S E  G +D M +A    H+G+GV+V+VGVP    
Sbjct: 239 CINPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQ 298

Query: 304 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 342
                P+ +L  RT KG  FG +K +  +P +V  YM K
Sbjct: 299 NLSINPMLLLTGRTWKGAVFGGWKSKDSVPKLVADYMAK 337

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score =  405 bits (1043), Expect = e-141
 Identities = 162/332 (48%), Positives = 220/332 (66%), Gaps = 4/332 (1%)

Query: 9   LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIF 68
           +  +AAVA EAGKPL I++V++ PP+A EV ++I  T +C TD +          FP + 
Sbjct: 1   MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVL 59

Query: 69  GHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLA 128
           GHE AG+VE+VGEGV+ ++ GDHV+ +FT ECG C+ C S   N+C+ +R    +G M  
Sbjct: 60  GHEGAGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMP- 118

Query: 129 DGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL 188
           DG +R S NG PV H+LG STF+EYTVVH   + KI+P APL+K C+L CGV+TG+GA +
Sbjct: 119 DGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVV 178

Query: 189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 248
           N AK E G +VAVFGLG VGLAA +GA+ AGA RII VD + ++ E AKKFG T FVN  
Sbjct: 179 NTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPK 238

Query: 249 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK 308
           E D  + E I E+T+GG D + EC GN++ M  A E  H   G +V++GV        T+
Sbjct: 239 EVD-DVVEAIVELTDGGADYAFECVGNVEVMRQALEATHR-GGTSVIIGVAGAGQEISTR 296

Query: 309 PINVLNERTLKGTFFGNYKPRTDLPSVVDMYM 340
           P  ++  R  KG+ FG  +PR+D+P +VD+YM
Sbjct: 297 PFQLVTGRVWKGSAFGGARPRSDIPRLVDLYM 328

Length = 366

>gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

 Score =  395 bits (1017), Expect = e-137
 Identities = 169/336 (50%), Positives = 234/336 (69%), Gaps = 1/336 (0%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHE 71
           +AAVAW AG+PL I++V+V  PQ  EV ++I  T +C TD +         +FP I GHE
Sbjct: 3   RAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHE 62

Query: 72  AAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQ 131
            AG+VE+VGEGV+ ++VGDHV+P++T ECG+C+ C S  +N+C  +R    +G+M  DG 
Sbjct: 63  GAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLM-PDGT 121

Query: 132 SRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA 191
           SRFS +G+P+ H++G STFSEYTVV    +AKINP APL++VC+L CGV+TG+GA LN A
Sbjct: 122 SRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTA 181

Query: 192 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD 251
           K E G +VAVFGLG +GL+  +GAR+A ASRII +D +  +FE AKK G TD VN +++D
Sbjct: 182 KVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPNDYD 241

Query: 252 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN 311
           +PIQEVI E+T+GGVD S EC GN++ M +A EC H GWG ++++GV        T+P  
Sbjct: 242 KPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQ 301

Query: 312 VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRFS 347
           ++  R  +G+ FG  K RT+LP +V+ YM   I   
Sbjct: 302 LVTGRVWRGSAFGGVKGRTELPGIVEQYMKGEIALD 337

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368

>gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

 Score =  387 bits (997), Expect = e-134
 Identities = 165/336 (49%), Positives = 223/336 (66%), Gaps = 2/336 (0%)

Query: 11  CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGH 70
           CKAAV WE GKPL I+++EVAPP+A EVRIK+  T +C TDL+  + K  TP  P I GH
Sbjct: 1   CKAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLPTP-LPVILGH 59

Query: 71  EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADG 130
           E AG+VES+G GV+ L+ GD V+P+F  +CG C+ C +   N+C   R    RG+M +DG
Sbjct: 60  EGAGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLM-SDG 118

Query: 131 QSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV 190
            SRF+  G+P++HFLGTSTF+EYTVV    +AKI+P APL+KVC++ CG STG GA +N 
Sbjct: 119 TSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNT 178

Query: 191 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 250
           AK   GS+ AVFGLG VGL+   G + AGASRII VD +  +FE+AK+ G T+ +N  + 
Sbjct: 179 AKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQ 238

Query: 251 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI 310
           D+PI EV+ EMT+GGVD + E  G+ D +  A +    G G +V+VGVP         P 
Sbjct: 239 DKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPN 298

Query: 311 NVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRF 346
           ++L  RT+KGT FG +K +  +P +V +Y  K    
Sbjct: 299 DLLTGRTIKGTVFGGWKSKDSVPKLVALYRQKKFPL 334

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase

 Score =  336 bits (864), Expect = e-114
 Identities = 139/336 (41%), Positives = 191/336 (56%), Gaps = 16/336 (4%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL-FPRIFGH 70
           +AAV  E GKPL I++VE+  P   EV ++I    LC +DL+     G  P   P + GH
Sbjct: 2   RAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVT--GDLPAPLPAVLGH 59

Query: 71  EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADG 130
           E AGVVE VG GV+ ++ GDHV+  +   CG CR+C     N+CD      + G  L DG
Sbjct: 60  EGAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCD--LGAGILGGQLPDG 117

Query: 131 QSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV 190
             RF+ +GEPV    G  TF+EYTVV    V KI+   PLD+  +L CGV+TG+GA +N 
Sbjct: 118 TRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVVNT 177

Query: 191 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 250
           A+   G +VAV G G VGL A +GARIAGASRII VD   ++ E A++FG T  VN SE 
Sbjct: 178 ARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASED 237

Query: 251 DRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP 309
           D    E + ++T+G G D + E  G    +  A      G G AV+VG+        T  
Sbjct: 238 D--AVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPG---ETVS 291

Query: 310 IN----VLNERTLKGTFFGNYKPRTDLPSVVDMYMN 341
           +      L+E+ L+G+ +G+  PR D+P ++D+Y  
Sbjct: 292 LPALELFLSEKRLQGSLYGSANPRRDIPRLLDLYRA 327

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363

>gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase

 Score =  285 bits (731), Expect = 3e-94
 Identities = 131/335 (39%), Positives = 186/335 (55%), Gaps = 11/335 (3%)

Query: 9   LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIF 68
           +   AAV  E G P +++DVE+  P+  EV ++I  T +C TDL   +    TPL P + 
Sbjct: 1   MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLPTPL-PAVL 59

Query: 69  GHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD-LLRINPVRGVML 127
           GHE AGVVE+VG  V+ L+ GDHV+  F   CG+C +C S     C+    +N       
Sbjct: 60  GHEGAGVVEAVGSAVTGLKPGDHVVLSFA-SCGECANCLSGHPAYCENFFPLN--FSGRR 116

Query: 128 ADGQSRFSIN-GEPVN-HFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLG 185
            DG +  S++ G PV+ HF G S+F+ Y VVH   V K++   PL+ +  L CG+ TG G
Sbjct: 117 PDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKDVPLELLAPLGCGIQTGAG 176

Query: 186 ATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV 245
           A LNV KP  GSS+AVFG GAVGLAA   A+IAG + II VD    R E AK+ G T  +
Sbjct: 177 AVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVI 236

Query: 246 NTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVF 305
           N  E D  +   I E+T GGVD +++ TG    +  A + +    G   LVG P   A  
Sbjct: 237 NPKEED--LVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPPGAEV 293

Query: 306 MTKPINVLNE-RTLKGTFFGNYKPRTDLPSVVDMY 339
                ++L   +T++G   G+  P+  +P ++++Y
Sbjct: 294 TLDVNDLLVSGKTIRGVIEGDSVPQEFIPRLIELY 328

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365

>gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

 Score =  262 bits (672), Expect = 2e-85
 Identities = 135/337 (40%), Positives = 184/337 (54%), Gaps = 14/337 (4%)

Query: 12  KAAVAWEAG--------KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL 63
           +AAV  E G        +PL+I++VE+ PP   EV +KI    LC +DL         PL
Sbjct: 2   RAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRPRPL 61

Query: 64  FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVR 123
            P   GHEAAGVV  VGEGV+DLEVGDHV+ VF   CG CR C      +C+        
Sbjct: 62  -PMALGHEAAGVVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGA 120

Query: 124 GVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 183
           G +L  G  R  + G  +NH LG S F+EY VV    V KI+   PL+   +  C V TG
Sbjct: 121 GTLL-SGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTG 179

Query: 184 LGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD 243
           +GA +N A    G SVAV GLG VGL+A  GA  AGAS+++ VD +  +   A++ G T 
Sbjct: 180 VGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATA 239

Query: 244 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 303
            VN  + +    E + E+T GGVD + E  G++  + +A+E    G G  V  G+P  +A
Sbjct: 240 TVNAGDPN--AVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEA 296

Query: 304 VFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMY 339
                 ++ V  ERTLKG++ G+  PR D+P  + +Y
Sbjct: 297 RLSVPALSLVAEERTLKGSYMGSCVPRRDIPRYLALY 333

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371

>gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family

 Score =  248 bits (634), Expect = 1e-79
 Identities = 124/333 (37%), Positives = 187/333 (56%), Gaps = 10/333 (3%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHE 71
           KAAV W  G+P  ++++E+  P+A EV +K+  + LC +D +        P +P + GHE
Sbjct: 3   KAAVLWGPGQPWEVEEIELDDPKAGEVLVKLVASGLCHSDEHLVTGDLPMPRYPILGGHE 62

Query: 72  AAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQ 131
            AGVV  VG GV+ ++ GDHV+  F   CG CR C + + N+CDL     + G  ++DG 
Sbjct: 63  GAGVVTKVGPGVTGVKPGDHVVLSFIPACGRCRWCSTGLQNLCDL-GAALLTGSQISDGT 121

Query: 132 SRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA 191
            RF  +G+ V       TFSEYTVV    V KI+   PLDK C++ CGV TG G+ +N+A
Sbjct: 122 YRFHADGQDVGQMCLLGTFSEYTVVPEASVVKIDDDIPLDKACLVGCGVPTGWGSAVNIA 181

Query: 192 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD 251
               G +V V G+G VG+ A +GA +AGA ++I VD    + E+A KFG T    + E  
Sbjct: 182 DVRPGDTVVVMGIGGVGINAVQGAAVAGARKVIAVDPVEFKREQALKFGATHAFASMEE- 240

Query: 252 RPIQEVIAEMTNG-GVDRSVECTGNID-NMIS-AFECVHDGWGVAVLVGV--PSKDAVFM 306
             +Q ++ E+TNG G D+++   G +D   I+ A      G G  V+ G+   +   V +
Sbjct: 241 -AVQ-LVRELTNGQGADKTIITVGEVDGEHIAEALSATRKG-GRVVVTGLGPMADVDVKV 297

Query: 307 TKPINVLNERTLKGTFFGNYKPRTDLPSVVDMY 339
                 L ++ L+GT FG   PR D+P ++++Y
Sbjct: 298 NLFELTLLQKELQGTLFGGANPRADIPRLLELY 330

This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369

>gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase

 Score =  216 bits (551), Expect = 2e-67
 Identities = 124/333 (37%), Positives = 176/333 (52%), Gaps = 15/333 (4%)

Query: 10  TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFG 69
           T +  +A   G P+ ++ + V  P   EV + I+   +C TDL++ E  G    FP + G
Sbjct: 1   TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREG-GINDEFPFLLG 59

Query: 70  HEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLAD 129
           HEAAGVVE+VGEGV+D+  GD+V+  +   CG CR C+      C     N  + + L D
Sbjct: 60  HEAAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTH-NATQKMTLTD 118

Query: 130 GQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN 189
           G          ++  LG   F+E T+VH+G   K++P A      +L CGV  GLGA +N
Sbjct: 119 GT--------ELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAVN 170

Query: 190 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 249
               +RG SVAV G G VG AA  GA +AGAS+II VD   ++ E A++FG T  VN+S 
Sbjct: 171 TGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSG 230

Query: 250 HDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK 308
            D    E I  +T G G D  ++  G  +    AF    D  G  VLVGVP+ D      
Sbjct: 231 TD--PVEAIRALTGGFGADVVIDAVGRPETYKQAFY-ARDLAGTVVLVGVPTPDMTLELP 287

Query: 309 PINVLNE-RTLKGTFFGNYKPRTDLPSVVDMYM 340
            ++V      LK +++G+  P  D P +VD+Y+
Sbjct: 288 LLDVFGRGGALKSSWYGDCLPERDFPMLVDLYL 320

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score =  213 bits (544), Expect = 3e-66
 Identities = 111/336 (33%), Positives = 163/336 (48%), Gaps = 19/336 (5%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPR--IFG 69
           KAAV      PL I+++ V  P+  E+ I++    +C +DL+    KG+ P FP   + G
Sbjct: 2   KAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVL--KGELP-FPPPFVLG 58

Query: 70  HEAAGVVESVGEGVSD---LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVM 126
           HE +G V  VG  V +   L VGD V+  F   CG CR+C     N+C+           
Sbjct: 59  HEISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGT 118

Query: 127 LADGQSR-FSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLG 185
           L DG +R F ++G PV  +      +EY VV +  +A +       +  +L C   T  G
Sbjct: 119 LYDGTTRLFRLDGGPVYMYSM-GGLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAYG 177

Query: 186 ATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV 245
           A  + A    G +VAV G+G VG +A + A+  GAS II VD   ++  +AK+ G T  V
Sbjct: 178 ALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTV 237

Query: 246 NTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV 304
           N ++ D      I E+T G GVD  VE  G  +    A + V DG G AV+VG+    A 
Sbjct: 238 NAAKEDAV--AAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGAT 294

Query: 305 --FMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDM 338
                  + V     + G++    +PR DLP +V +
Sbjct: 295 AEIPITRL-VRRGIKIIGSY--GARPRQDLPELVGL 327

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  188 bits (480), Expect = 6e-58
 Identities = 83/304 (27%), Positives = 125/304 (41%), Gaps = 34/304 (11%)

Query: 37  EVRIKIKYTSLCRTDLYFWESKGQTPL-FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPV 95
           EV ++++   LC TDL+        P   P I GHE AGVV  VG GV+ ++VGD V+ +
Sbjct: 1   EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVL 60

Query: 96  FTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTV 155
               CG C  CR        L                                 F+EY V
Sbjct: 61  PNLGCGTCELCRELCPGGGIL--------------------------GEGLDGGFAEYVV 94

Query: 156 VHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGA 215
           V +  +  +     L++  +L   ++T   A       + G +V V G G VGL AA+ A
Sbjct: 95  VPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLA 154

Query: 216 RIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN 275
           + AGA R+I  DRS ++ E AK+ G    ++  E D    E +     GG D  ++  G 
Sbjct: 155 KAAGA-RVIVTDRSDEKLELAKELGADHVIDYKEEDLE--EELRLTGGGGADVVIDAVGG 211

Query: 276 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSV 335
            + +  A   +  G G  V+VG  S           +  E T+ G+  G  +   D    
Sbjct: 212 PETLAQALRLLRPG-GRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTRE---DFEEA 267

Query: 336 VDMY 339
           +D+ 
Sbjct: 268 LDLL 271

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score =  177 bits (451), Expect = 1e-52
 Identities = 94/338 (27%), Positives = 142/338 (42%), Gaps = 24/338 (7%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDL-YFWESKGQTPLFPRIFGH 70
           KAAV +  G  + +++     P   +V I++  T +C +DL  +   +   P    I GH
Sbjct: 2   KAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGH 61

Query: 71  EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADG 130
           E  G V  VG  V   +VGD V+      CG CR+CR+   N+C+        G+     
Sbjct: 62  EFVGEVVEVGV-VRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLG---- 116

Query: 131 QSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV 190
                          G   F+EY  V +       P    ++   L+  ++T        
Sbjct: 117 -----------GGIDGG--FAEYVRVPADFNLAKLPDGIDEEAAALTEPLATAYHGHAER 163

Query: 191 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 250
           A    G +V V G G +GL A   A++ GAS +I VDRS +R E AK+ G  D V     
Sbjct: 164 AAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSE 223

Query: 251 DRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP 309
           D      I E+T G G D  +E  G+   +  A E +  G G  V+VGV   + + +   
Sbjct: 224 DDAG-AEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVGVYGGEDIPLPAG 281

Query: 310 INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRFS 347
           + V  E TL+G+       R D    +D+  +  I   
Sbjct: 282 LVVSKELTLRGSL--RPSGREDFERALDLLASGKIDPE 317

Length = 350

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score =  175 bits (446), Expect = 5e-52
 Identities = 103/331 (31%), Positives = 152/331 (45%), Gaps = 39/331 (11%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHE 71
           KAAV  + G+PL I++V V  P   EV IK++   +C TDL+  +     P  P I GHE
Sbjct: 5   KAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHE 64

Query: 72  AAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADG 130
             G V  VGEGV+ L+VGD V +      CG+C +CRS   N+C   +I           
Sbjct: 65  IVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKI----------- 113

Query: 131 QSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV 190
            + ++ +G           ++EY VV +  V KI     L +   L C   T   A L  
Sbjct: 114 -TGYTTDG----------GYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRA-LKK 161

Query: 191 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 250
           A  + G  VAV G G +G  A + A+  GA  +I + RS ++ E AKK G    +N+S+ 
Sbjct: 162 ANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVINSSDS 220

Query: 251 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI 310
           D    E + E+     D  ++  G    +  + + +  G G  VLVG+P         P 
Sbjct: 221 DAL--EAVKEI----ADAIIDTVGPAT-LEPSLKALRRG-GTLVLVGLPGGGP-IPLLPA 271

Query: 311 N--VLNERTLKGTFFGNYKPRTDLPSVVDMY 339
              +L E ++ G+  G    R DL   +D  
Sbjct: 272 FLLILKEISIVGSLVGT---RADLEEALDFA 299

Length = 339

>gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase

 Score =  161 bits (411), Expect = 1e-46
 Identities = 91/321 (28%), Positives = 148/321 (46%), Gaps = 39/321 (12%)

Query: 14  AVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLY-------FWESKGQTPL--- 63
           A  +   K + +++V   P +  EV+IK+ +  +C +DL+       F  ++G   L   
Sbjct: 3   AARYHGRKDIRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGE 62

Query: 64  -FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV 122
             P   GHE +GVV  VG GV+  +VGD V+   T +CG C  C+  + N+CD   +  +
Sbjct: 63  TAPVTLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCD--SLGFI 120

Query: 123 RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 182
            G+    G                   F+EY VV +  V K+    PL+    L   ++ 
Sbjct: 121 -GLGGGGG------------------GFAEYVVVPAYHVHKLPDNVPLE-EAALVEPLAV 160

Query: 183 GLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 242
              A +  +  + G +  V G G +GL      + AGAS+II  + S  R E A++ G T
Sbjct: 161 AWHA-VRRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGAT 219

Query: 243 DFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK 301
             ++ +E D  +   + ++T G GVD S +C G    + +A + +    G AV V +  K
Sbjct: 220 IVLDPTEVD--VVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWEK 276

Query: 302 DAVFMTKPINVLNERTLKGTF 322
              F    + VL E+TL G+ 
Sbjct: 277 PISFNPNDL-VLKEKTLTGSI 296

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score =  160 bits (406), Expect = 4e-46
 Identities = 92/329 (27%), Positives = 135/329 (41%), Gaps = 54/329 (16%)

Query: 14  AVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDL--YFWESKGQTPLFPRIFGHE 71
           A+       L  +D+    P   EV +K+K   +C +D+  Y           P + GHE
Sbjct: 3   ALVLTGPGDLRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYL---GTGAYHPPLVLGHE 59

Query: 72  AAGVVESVGEGVSDLEVGDHV-----LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVM 126
            +G VE VG GV DL VGD V     LP     CG C +C+    ++C     N     +
Sbjct: 60  FSGTVEEVGSGVDDLAVGDRVAVNPLLP-----CGKCEYCKKGEYSLCS----N--YDYI 108

Query: 127 LADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCG----VST 182
              G  R                F+EY  V +  + KI    P D V           + 
Sbjct: 109 ---GSRRDG-------------AFAEYVSVPARNLIKI----P-DHVDYEEAAMIEPAAV 147

Query: 183 GLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 242
            L A + +A    G +V V G G +GL A +  +I GA R+I VD   ++   A++ G  
Sbjct: 148 ALHA-VRLAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGAD 206

Query: 243 DFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK 301
           D +N  E D    E + E+T G G D  +E  G+   +  A      G G  VLVG+P  
Sbjct: 207 DTINPKEED---VEKVRELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPYG 262

Query: 302 DAVFMTKPIN--VLNERTLKGTFFGNYKP 328
           D     +     +  E T++G++     P
Sbjct: 263 DVTLSEEAFEKILRKELTIQGSWNSYSAP 291

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score =  158 bits (403), Expect = 1e-45
 Identities = 102/320 (31%), Positives = 147/320 (45%), Gaps = 47/320 (14%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL-FPRIFGH 70
           KA V +E    L +++V V  P   EV IK+    +C TDL+ +E  G+     P + GH
Sbjct: 2   KALV-YEGPGELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYE--GEFGAAPPLVPGH 58

Query: 71  EAAGVVESVGEGVSDLEVGDHVLPVFTGE----CGDCRHCRSDVSNMCDLLRINPVRGVM 126
           E AGVV +VG  V+  +VGD V      +    CG+C +CR    N+C+ L      GV 
Sbjct: 59  EFAGVVVAVGSKVTGFKVGDRV----AVDPNIYCGECFYCRRGRPNLCENLT---AVGVT 111

Query: 127 LADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI-NPLAPLDKVCI--LSCGVSTG 183
              G                   F+EY VV +  V KI + L+  +      LSC V   
Sbjct: 112 RNGG-------------------FAEYVVVPAKQVYKIPDNLSFEEAALAEPLSCAVH-- 150

Query: 184 LGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD 243
            G  L++   + G SV VFG G +GL  A+  ++ GASR+   + + ++ E AKK G T+
Sbjct: 151 -G--LDLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATE 207

Query: 244 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 303
            V+ S  D    E   E    G D  +E TG    +  A E    G G  ++ GV + DA
Sbjct: 208 TVDPSRED---PEAQKEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYAPDA 263

Query: 304 VFMTKPINVLN-ERTLKGTF 322
                P  +   E T+ G+F
Sbjct: 264 RVSISPFEIFQKELTIIGSF 283

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score =  155 bits (394), Expect = 2e-44
 Identities = 95/318 (29%), Positives = 143/318 (44%), Gaps = 35/318 (11%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHE 71
           +AAV  E G+PL I++V    P    V ++++   +CR+D + W+        P + GHE
Sbjct: 2   RAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHE 61

Query: 72  AAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQ 131
            AGVV  VGE VS   VGD V   F   CG C +CR+  SN+C+               Q
Sbjct: 62  FAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQV------------Q 109

Query: 132 SRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKV-----CILSCGVSTGLGA 186
             F+  G          +F+EY  V     A +N +   D V       L C  +T   A
Sbjct: 110 PGFTHPG----------SFAEYVAVPR---ADVNLVRLPDDVDFVTAAGLGCRFATAFRA 156

Query: 187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 246
            ++ A+ + G  VAV G G VGL+A   A   GA R+I VD    + E A++ G    VN
Sbjct: 157 LVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVN 215

Query: 247 TSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFM 306
            SE +      + ++T GG   SV+  G  +   ++   +    G  V VG+   +   +
Sbjct: 216 ASEVEDV-AAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLTLGEEAGV 273

Query: 307 TKPIN--VLNERTLKGTF 322
             P++  V  E  + G+ 
Sbjct: 274 ALPMDRVVARELEIVGSH 291

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score =  152 bits (386), Expect = 4e-43
 Identities = 94/293 (32%), Positives = 139/293 (47%), Gaps = 40/293 (13%)

Query: 20  GKPLIIQDVEVAPPQAM--EVRIKIKYTSLCRTDLYFWESKGQTPLF--PRIFGHEAAGV 75
            KP  ++ V++  P     EV +++K   +C +DL+ +   G+ P    PRI GHE +G 
Sbjct: 7   EKPGRLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYH--GRNPFASYPRILGHELSGE 64

Query: 76  VESVGEGVSDLEVGDHV--LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSR 133
           V  VGEGV+ L+VGD V   P     CG+C  CR    N C+ L+   V GV   DG   
Sbjct: 65  VVEVGEGVAGLKVGDRVVVDPYI--SCGECYACRKGRPNCCENLQ---VLGVH-RDG--- 115

Query: 134 FSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKP 193
                           F+EY VV +  +  +     LD+  ++   ++ G  A    A  
Sbjct: 116 ---------------GFAEYIVVPADAL-LVPEGLSLDQAALVEP-LAIGAHAV-RRAGV 157

Query: 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRP 253
             G +V V G G +GL   + A+  GA R+I VD   +R E A++ G  D +N  + D  
Sbjct: 158 TAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVGDED-- 214

Query: 254 IQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVF 305
           +   + E+T+G G D  ++ TGN  +M  A E V  G G  VLVG+      F
Sbjct: 215 VAARLRELTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVGLSKGPVTF 266

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score =  148 bits (376), Expect = 1e-41
 Identities = 93/343 (27%), Positives = 138/343 (40%), Gaps = 33/343 (9%)

Query: 14  AVAWEAGKPLIIQ--DVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL-FPRIFGH 70
           A  +  G   ++   +V V  P   EV +K+K   +C +DL+  +    T    P   GH
Sbjct: 3   AWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGH 62

Query: 71  EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADG 130
           E AG V  VG GV++ +VGD V       CG C  CR    N+C            L  G
Sbjct: 63  EIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLC------------LNQG 110

Query: 131 QSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV 190
                I+G           F+EY VV +  +  +    P  +  + +  V T   A +  
Sbjct: 111 MPGLGIDG----------GFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRA 160

Query: 191 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 250
            + + G +V V GLG +GL A + A+  GA  +I VD   ++ E AK+ G  D V  S  
Sbjct: 161 GEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGA-DEVLNSLD 218

Query: 251 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI 310
           D P  +  A    GG D   +  G       A + V  G G  V+VG+           +
Sbjct: 219 DSPKDKKAAG-LGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGRDKLTVDLSDL 276

Query: 311 NVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRFSSSRPSF 353
            +  E  + G+F G      DLP V+D+     +         
Sbjct: 277 -IARELRIIGSFGG---TPEDLPEVLDLIAKGKLDPQVETRPL 315

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score =  146 bits (370), Expect = 9e-41
 Identities = 97/294 (32%), Positives = 128/294 (43%), Gaps = 28/294 (9%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHE 71
           KA V    GK  + +  +       +  +++  TS+C +DL+ +           I GHE
Sbjct: 2   KALVYLGPGKIGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHE 61

Query: 72  AAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQ 131
             G V  VG  V  L+ GD V       CG CR CR      C            L   +
Sbjct: 62  FVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHC---------ENGLWGWK 112

Query: 132 SRFSINGEPVNHFLGTSTFSEYTVVH--SGCVAKINPLAPLDKVCILSCGVSTGL-GATL 188
               I+G            +EY  V      +AKI    P +   +LS  + TG  GA L
Sbjct: 113 LGNRIDG----------GQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGFHGAEL 162

Query: 189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 248
              KP  GS+VAV G G VGL A  GAR+ GA+RII VD + +R + AK+ G TD +N  
Sbjct: 163 AGIKP--GSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPK 220

Query: 249 EHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK 301
             D  I E I E+T G GVD  +E  G  +    A + V  G G    VGV  K
Sbjct: 221 NGD--IVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANVGVYGK 271

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like

 Score =  144 bits (366), Expect = 2e-40
 Identities = 93/302 (30%), Positives = 134/302 (44%), Gaps = 33/302 (10%)

Query: 25  IQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIF-GHEAAGVVESVGEGV 83
           +++  V  P   EV +++K + LC +DL+++    + P +  +  GHE AGVV +VG GV
Sbjct: 14  LREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGV 73

Query: 84  SDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNH 143
           +   VGD V+      CG CR+CR     +C                      +      
Sbjct: 74  THFRVGDRVMVYHYVGCGACRNCRRGWMQLCT---------------------SKRAAYG 112

Query: 144 FLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG 203
           +      +EY +V    +  +          +L CG+ T   A L         +V V G
Sbjct: 113 WNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHA-LRRVGVSGRDTVLVVG 171

Query: 204 LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN 263
            G VGL A   AR  GA  +IGVD S +R E AK  G  DFV  S  D    + I E+T+
Sbjct: 172 AGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGA-DFVINSGQDDV--QEIRELTS 228

Query: 264 G-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL--NERTLKG 320
           G G D ++EC+GN      A E V   WG  VLVG   +      +  N L   +RTL G
Sbjct: 229 GAGADVAIECSGNTAARRLALEAVRP-WGRLVLVGEGGE---LTIEVSNDLIRKQRTLIG 284

Query: 321 TF 322
           ++
Sbjct: 285 SW 286

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  144 bits (367), Expect = 2e-40
 Identities = 98/341 (28%), Positives = 142/341 (41%), Gaps = 51/341 (14%)

Query: 11  CKAAVAWEAG-KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL---FPR 66
            KAAV  E G KP  ++DV V  P   EV +K++ + +C TDL+     G  P+    P 
Sbjct: 1   MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAA--LGDWPVKPKLPL 58

Query: 67  IFGHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGV 125
           I GHE AGVV +VG GVS L+VGD V +      CG C +CR+    +C           
Sbjct: 59  IGGHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCP---------- 108

Query: 126 MLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLG 185
                 S ++++G          TF+EY +  +  V  I      ++   L C   T   
Sbjct: 109 --NQKNSGYTVDG----------TFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYK 156

Query: 186 ATLNVAKPERGSSVAVFGLG------AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF 239
           A L  A  + G  V + G G       V  A A G       R+I +D   ++ E AK+ 
Sbjct: 157 A-LKKAGLKPGDWVVISGAGGGLGHLGVQYAKAMGL------RVIAIDVGDEKLELAKEL 209

Query: 240 GVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP 299
           G   FV+  + D  ++ V      GG    V    +      A + +  G G  V VG+P
Sbjct: 210 GADAFVDFKKSD-DVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGLP 267

Query: 300 SKDAVFMTKPIN--VLNERTLKGTFFGNYKPRTDLPSVVDM 338
                F+       VL   T+ G+  G    R DL   ++ 
Sbjct: 268 PGG--FIPLDPFDLVLRGITIVGSLVGT---RQDLQEALEF 303

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

 Score =  144 bits (366), Expect = 5e-40
 Identities = 87/332 (26%), Positives = 142/332 (42%), Gaps = 32/332 (9%)

Query: 11  CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPR--IF 68
            +AAV    GKPL I++V +   +   V ++++   +C +D++     G+ P  P   I 
Sbjct: 1   ARAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTV--AGRRPRVPLPIIL 58

Query: 69  GHEAAGVVESVGEGVSD------LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV 122
           GHE  G V ++G GV+       L+VGD V       CG C  C       C+  +    
Sbjct: 59  GHEGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKK--- 115

Query: 123 RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGC-VAKINPLAPLDKVCILSCGVS 181
                           +P  H  G   ++E+  +  G  + ++    P +     +C ++
Sbjct: 116 --YGHEAS------CDDP--HLSGG--YAEHIYLPPGTAIVRVPDNVPDEVAAPANCALA 163

Query: 182 TGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV 241
           T L A         G +V V G G +GL A   A++AGA R+I +D S +R E A++FG 
Sbjct: 164 TVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGA 223

Query: 242 TDFVNTSEH-DRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP 299
              ++  E  D   + ++ ++T G G D  +E +G+   +    E +  G G  VLVG  
Sbjct: 224 DATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVGSV 282

Query: 300 SKDAVFMTKPIN-VLNERTLKGTFFGNYKPRT 330
           +        P   V    T+ G    NY P  
Sbjct: 283 APAGTVPLDPERIVRKNLTIIGVH--NYDPSH 312

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361

>gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase

 Score =  142 bits (361), Expect = 2e-39
 Identities = 90/324 (27%), Positives = 137/324 (42%), Gaps = 47/324 (14%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHE 71
           KAAV       + +++V V  P   EV +K++   +C TD+            PRI GHE
Sbjct: 2   KAAV-LHGPNDVRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHE 60

Query: 72  AAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQ 131
            AG +  VG+GV+  +VGD V       CG+C +C     NMC   +        L DG 
Sbjct: 61  IAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKK----FGNLYDG- 115

Query: 132 SRFSINGEPVNHFLGTSTFSEYTVVHSGCVAK--INPLAPLDKVCI--------LSCGVS 181
                             F+EY  V +  V +  +  L   D V          L+C + 
Sbjct: 116 -----------------GFAEYVRVPAWAVKRGGVLKLP--DNVSFEEAALVEPLACCI- 155

Query: 182 TGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV 241
                    A  + G +V V G G +GL  A  A+ +GA ++I  D +  R E AKK G 
Sbjct: 156 ----NAQRKAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGA 211

Query: 242 TDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 300
              ++ +E D    E + E+T+G G D  +  TG+ +    A E V  G G  +  G   
Sbjct: 212 DYTIDAAEEDLV--EKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILFFGGLP 268

Query: 301 KDAVFMTKPINVL--NERTLKGTF 322
           K +  +    N++   E T+ G++
Sbjct: 269 KGS-TVNIDPNLIHYREITITGSY 291

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score =  141 bits (357), Expect = 6e-39
 Identities = 87/337 (25%), Positives = 134/337 (39%), Gaps = 90/337 (26%)

Query: 21  KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF----PRIFGHEAAGVV 76
             L +++  +  P   EV ++++   +C +D+++++  G+   F    P + GHE+AG V
Sbjct: 8   GDLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYK-HGRIGDFVVKEPMVLGHESAGTV 66

Query: 77  ESVGEGVSDLEVGDHV-----LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQ 131
            +VG GV+ L+VGD V     +P     C  C  C+S   N+C                 
Sbjct: 67  VAVGSGVTHLKVGDRVAIEPGVP-----CRTCEFCKSGRYNLC----------------- 104

Query: 132 SRFSINGEPVNHFLGTS----TFSEYTVVHSGCVAKIN------------PLAPLDKVCI 175
                   P   F  T     T   Y    +    K+             PL+    V +
Sbjct: 105 --------PDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALVEPLS----VGV 152

Query: 176 LSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE 235
            +C            A    G +V VFG G +GL  A  A+  GA++++  D    R E 
Sbjct: 153 HAC----------RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEF 202

Query: 236 AKKFGVTDFVNTSEHDRP-IQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGW--- 290
           AK+ G T  VN    D P   E IAE+  G G D  +ECTG       A  C+       
Sbjct: 203 AKELGATHTVNVRTEDTPESAEKIAELLGGKGPDVVIECTG-------AESCIQTAIYAT 255

Query: 291 ---GVAVLVGVPSKDAVFMTKPINVLNER--TLKGTF 322
              G  VLVG+   +      P++  + R   ++G F
Sbjct: 256 RPGGTVVLVGMGKPEVTL---PLSAASLREIDIRGVF 289

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases

 Score =  138 bits (349), Expect = 9e-38
 Identities = 85/301 (28%), Positives = 126/301 (41%), Gaps = 37/301 (12%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLY--FWESKGQTPLFPRIFG 69
           KA      GK   I +  +      +  ++    + C +D++  +  + G+      I G
Sbjct: 2   KAFAMLGIGKVGWI-EKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERH--GMILG 58

Query: 70  HEAAGVVESVGEGVSDLEVGDHVL-PVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLA 128
           HEA GVVE VG  V D + GD V+ P  T         +    +           G ML 
Sbjct: 59  HEAVGVVEEVGSEVKDFKPGDRVIVPAIT-PDWRSVAAQRGYPSQS---------GGML- 107

Query: 129 DGQSRFS--INGEPVNHFLGTSTFSEYTVVHS--GCVAKINPLAPLDKVCILSCGVSTGL 184
            G  +FS   +G           F+EY  V+     +A +      ++  +L   +STG 
Sbjct: 108 -GGWKFSNFKDG----------VFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGF 156

Query: 185 GATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF 244
                 A  + G +VAVFG+G VGL A  GAR+ GA RII V     R E AK++G TD 
Sbjct: 157 HGAEL-ANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDI 215

Query: 245 VNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 303
           V+    +  + E I ++T G GVD  +   G  D    A + +  G G    V    +D 
Sbjct: 216 VDY--KNGDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVNYYGEDD 272

Query: 304 V 304
            
Sbjct: 273 Y 273

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351

>gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

 Score =  138 bits (351), Expect = 9e-38
 Identities = 92/276 (33%), Positives = 131/276 (47%), Gaps = 30/276 (10%)

Query: 14  AVAWEAGKPLIIQDVEVA--PPQAME----VRIKIKYTSLCRTDLYFWESKGQTPLFPR- 66
           A+ W  GK     DV V   P   +E      +++  T++C +DL+ +   G  P   + 
Sbjct: 3   ALVWH-GK----GDVRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYH--GYIPGMKKG 55

Query: 67  -IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGV 125
            I GHE  GVVE VG  V +L+VGD V+  FT  CG+C +C+  + + CD    NP   +
Sbjct: 56  DILGHEFMGVVEEVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCD--NTNPSAEM 113

Query: 126 MLADGQSRFSINGEPVNHFLG--TSTFSEYTVV---HSGCVAKINPLAPLDKVCILSCGV 180
               G +   I G    H  G      +EY  V     G   KI      +K   LS  +
Sbjct: 114 AKLYGHAGAGIFGYS--HLTGGYAGGQAEYVRVPFADVGPF-KIPDDLSDEKALFLSDIL 170

Query: 181 STGL-GATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF 239
            TG   A L   KP  G +VAV+G G VGL AA  A++ GA R+I +DR  +R E A+  
Sbjct: 171 PTGYHAAELAEVKP--GDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSH 228

Query: 240 GVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG 274
              + +N  E D  + E + E+T G G D  ++  G
Sbjct: 229 LGAETINFEEVDDVV-EALRELTGGRGPDVCIDAVG 263

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score =  136 bits (346), Expect = 2e-37
 Identities = 91/347 (26%), Positives = 151/347 (43%), Gaps = 52/347 (14%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWES---KGQTPLFPRIF 68
           KAA  +E GKPL ++DV V  P   +V +++    +C +DL+  +           P   
Sbjct: 2   KAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTL 61

Query: 69  GHEAAGVVESVGEGVSDLEVGDHVL--PVFTGECGDCRHCRSDVSNMCDLLRINPVRGVM 126
           GHE AG VE VG GV  L+ GD V+  P +   CG CR+CR    N C+  R        
Sbjct: 62  GHENAGWVEEVGSGVDGLKEGDPVVVHPPWG--CGTCRYCRRGEENYCENARFPG----- 114

Query: 127 LADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSC-GVSTGLG 185
                     +G           F+EY +V S  + K+       +   L+  G++    
Sbjct: 115 -------IGTDG----------GFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHA 157

Query: 186 ATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV 245
               +   + GS+V V G+G +G  A +  R    + +I VDRS +  + A++ G    +
Sbjct: 158 VKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVL 217

Query: 246 NTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVG------V 298
           N S+      E + E+T G G D  ++  G+ + +  A + +  G G  V+VG      +
Sbjct: 218 NASDDVV---EEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVGYGGHGRL 273

Query: 299 PSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIR 345
           P+ D V          E ++ G+ +G      +L  VV +  +  ++
Sbjct: 274 PTSDLVPT--------EISVIGSLWGTR---AELVEVVALAESGKVK 309

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score =  134 bits (339), Expect = 2e-36
 Identities = 83/266 (31%), Positives = 121/266 (45%), Gaps = 35/266 (13%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL--FPRIFG 69
           KAA+  +  KPL I++V    P   EV IK+K   +C  DL FW  KG  P   +P I G
Sbjct: 2   KAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFW--KGFFPRGKYPLILG 59

Query: 70  HEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLAD 129
           HE  G VE VGEGV   + GD V+  +   CG C +C S   N+C               
Sbjct: 60  HEIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRA----------- 108

Query: 130 GQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN 189
                   GE V+       F+EY  V    + K+      +   + +C V T + A L 
Sbjct: 109 ------EYGEEVDGG-----FAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHA-LK 156

Query: 190 VAKPERGSSVAV-FGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 248
            A  ++G +V V    G VG+ A + A+  GA R+I V RS ++ +  K+ G    ++ S
Sbjct: 157 RAGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGS 215

Query: 249 EHDRPIQEVIAEMTNGGVDRSVECTG 274
           +      E + ++  GG D  +E  G
Sbjct: 216 K----FSEDVKKL--GGADVVIELVG 235

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score =  132 bits (334), Expect = 8e-36
 Identities = 88/316 (27%), Positives = 130/316 (41%), Gaps = 34/316 (10%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHE 71
           KAAV   AG PL  ++V V  P   EV IKI+   +C TDL+  E       +P + GHE
Sbjct: 1   KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHE 60

Query: 72  AAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADG 130
             G V  VG GV   +VGD V +    G CG C +CR  + N+C                
Sbjct: 61  IVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTG--------- 111

Query: 131 QSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV 190
              ++  G           ++EY V  +     +    PL +   L C   T   A L  
Sbjct: 112 ---YTTQG----------GYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSA-LRD 157

Query: 191 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 250
           A P  G  VAV G+G +G  A + AR  G    + + RS  + E A+K G  + V++   
Sbjct: 158 AGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSGAE 216

Query: 251 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA-VFMTKP 309
                    +   GG D  +    +     +A   +  G G  VLVG+P          P
Sbjct: 217 LD------EQAAAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPESPPFSPDIFP 269

Query: 310 INVLNERTLKGTFFGN 325
           + ++  +++ G+  G 
Sbjct: 270 L-IMKRQSIAGSTHGG 284

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase

 Score =  132 bits (335), Expect = 1e-35
 Identities = 100/325 (30%), Positives = 144/325 (44%), Gaps = 53/325 (16%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE----SKGQTPLFPRI 67
           KA V  +AG    + +V V  P   EV IK+   S+C TD++ +E    ++ +    P I
Sbjct: 2   KAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRI-KPPLI 60

Query: 68  FGHEAAGVVESVGEGVSDLEVGDHVLPVFTGE----CGDCRHCRSDVSNMCDLLRINPVR 123
           FGHE AG V  VGEGV+ ++VGD+V    + E    CG C  CR+   ++C   +I    
Sbjct: 61  FGHEFAGEVVEVGEGVTRVKVGDYV----SAETHIVCGKCYQCRTGNYHVCQNTKI---L 113

Query: 124 GVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI---LSCGV 180
           GV           +G           F+EY VV    + K +   P +   I   L   V
Sbjct: 114 GV---------DTDG----------CFAEYVVVPEENLWKNDKDIPPEIASIQEPLGNAV 154

Query: 181 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 240
            T L   +       G SV + G G +GL A   A+ AGAS +I  D +  R E AKK G
Sbjct: 155 HTVLAGDV------SGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMG 208

Query: 241 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 300
               +N  E D  + EV +     GVD  +E +GN   +    + +  G G   ++G+P 
Sbjct: 209 ADVVINPREED--VVEVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPP 265

Query: 301 KDAVFMTKPINVLNERTLKG-TFFG 324
                    I++ N    KG T  G
Sbjct: 266 GPV-----DIDLNNLVIFKGLTVQG 285

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341

>gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase

 Score =  131 bits (333), Expect = 2e-35
 Identities = 93/343 (27%), Positives = 141/343 (41%), Gaps = 49/343 (14%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE------SKGQTPL-- 63
           KAA   E GKPL   +++   P   EV +K+    +C +DL+ W+            L  
Sbjct: 2   KAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDD 61

Query: 64  ----FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFT-GECGDCRHCRSDVSNMCDLLR 118
                P + GHE  G V +VG   +D++VGD VL V+    CG+C  C +   N+C   R
Sbjct: 62  RGVKLPLVLGHEIVGEVVAVGPDAADVKVGDKVL-VYPWIGCGECPVCLAGDENLCAKGR 120

Query: 119 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVV-HSGCVAKINPLAPLDKVCILS 177
                G+    G                   ++EY +V HS  +     L        L+
Sbjct: 121 AL---GIFQDGG-------------------YAEYVIVPHSRYLVDPGGL-DPALAATLA 157

Query: 178 CGVSTGLGA--TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE 235
           C   T   A   L     +    V + G G +GL A    +  G + II VD    + E 
Sbjct: 158 CSGLTAYSAVKKLMPLVADE--PVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEA 215

Query: 236 AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVL 295
           AK  G    VN S+ D   +  I +   GGVD  ++   N      AF+ +  G G  VL
Sbjct: 216 AKAAGADVVVNGSDPDAAKR--IIKAAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVL 272

Query: 296 VGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDM 338
           VG+   +A     P+  L   T++G++ G+     +L  +V +
Sbjct: 273 VGLFGGEATLPL-PLLPLRALTIQGSYVGSL---EELRELVAL 311

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score =  124 bits (314), Expect = 4e-33
 Identities = 82/304 (26%), Positives = 136/304 (44%), Gaps = 36/304 (11%)

Query: 25  IQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVS 84
           +++V    P   EV IK+    +C +DL+ ++        P + GHE +G +  VG  V 
Sbjct: 16  LREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVE 75

Query: 85  DLEVGDHVLPVFTGE-CGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNH 143
             +VGD V+   T   CG C +CR    N+C      P R      G      +G     
Sbjct: 76  GWKVGDRVVSETTFSTCGRCPYCRRGDYNLC------PHR---KGIG---TQADG----- 118

Query: 144 FLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI---LSCGVSTGLGATLNVAKPERGSSVA 200
                 F+EY +V    + ++     L+   +   L+  V     A    +    G +V 
Sbjct: 119 -----GFAEYVLVPEESLHELPENLSLEAAALTEPLAVAVH----AVAERSGIRPGDTVV 169

Query: 201 VFGLGAVGLAAAEGARIAGASRII-GVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIA 259
           VFG G +GL AA+ A++ GA+ ++ G ++   R + AK+ G    VN  E D  + E++ 
Sbjct: 170 VFGPGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGADA-VNGGEED--LAELVN 226

Query: 260 EMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTL 318
           E+T+G G D  +EC+G +  +  A E +  G G  V VG+    A  +     +  E ++
Sbjct: 227 EITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVGIFGPLAASIDVERIIQKELSV 285

Query: 319 KGTF 322
            G+ 
Sbjct: 286 IGSR 289

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

 Score =  123 bits (311), Expect = 3e-32
 Identities = 83/297 (27%), Positives = 126/297 (42%), Gaps = 32/297 (10%)

Query: 14  AVAWEAGKPLIIQDVEVAPPQAMEVR---IKIKYTSLCRTDLYFWESKGQTPLFPRIFGH 70
           AV ++   P  ++  EV  PQ  +     +K+   ++C +DL+ +     +     + GH
Sbjct: 3   AVVFK--GPGDVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIPSTP-GFVLGH 59

Query: 71  EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADG 130
           E  G V  VG  V  L+VGD V+  FT  CG+C +CR   S  C        +G +    
Sbjct: 60  EFVGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCA-------KGGLFGYA 112

Query: 131 QSRFSINGEPVNHFLGTSTFSEYTVV--HSGCVAKINPLAPLDKVCILSCGVSTGLGATL 188
            S  +++G            +EY  V    G + K+      +   +L   + TG     
Sbjct: 113 GSP-NLDGAQ----------AEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTGYFGAK 161

Query: 189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 248
             A+   G +VAV G G VGL A   A++ GA+R+  VD   +R E A   G        
Sbjct: 162 R-AQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE--PINF 218

Query: 249 EHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV 304
           E   P++ V  E T G G D  +E  G    +  AF+ V    GV   VGV + +  
Sbjct: 219 EDAEPVERV-REATEGRGADVVLEAVGGAAALDLAFDLVRP-GGVISSVGVHTAEEF 273

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344

>gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like

 Score =  122 bits (309), Expect = 4e-32
 Identities = 89/274 (32%), Positives = 123/274 (44%), Gaps = 42/274 (15%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAME---VRIKIKYTSLCRTDLYFWESKGQTPLFP--R 66
           KA V    GK       +   P   E     +K+  T++C TDL+    KG  P     R
Sbjct: 2   KALVYHGPGKISW---EDRPKPTIQEPTDAIVKMLKTTICGTDLHIL--KGDVPTVTPGR 56

Query: 67  IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVM 126
           I GHE  GVVE VG  V++ +VGD VL      CG C +CR  + + C            
Sbjct: 57  ILGHEGVGVVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHC------------ 104

Query: 127 LADGQSRF--SINGEPVNHFLGTSTFSEYT-VVHS-GCVAKINPLAPLDKVCILSCGVST 182
              G       I+G          T +EY  + H+   + K+      +   +LS  + T
Sbjct: 105 -ESGGWILGNLIDG----------TQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPT 153

Query: 183 GL-GATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV 241
           G     LN  K + G +VA+ G G VGLAA   A++   S+II VD    R E AKK G 
Sbjct: 154 GYECGVLN-GKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGA 212

Query: 242 TDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG 274
           T  VN+++ D    E + E+T+G GVD  +E  G
Sbjct: 213 THTVNSAKGD--AIEQVLELTDGRGVDVVIEAVG 244

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

 Score =  123 bits (310), Expect = 6e-32
 Identities = 82/264 (31%), Positives = 123/264 (46%), Gaps = 54/264 (20%)

Query: 40  IKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTG 98
           ++I  T++C +DL+ +   G+T      + GHEA G VE VG  V  L+VGD V+  F  
Sbjct: 30  VRITTTAICGSDLHMYR--GRTGAEPGLVLGHEAMGEVEEVGSAVESLKVGDRVVVPFNV 87

Query: 99  ECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHS 158
            CG CR+C+  ++ +C  L +NP R      G +   ++  P   + G    +EY  V  
Sbjct: 88  ACGRCRNCKRGLTGVC--LTVNPGR-----AGGAYGYVDMGP---YGGGQ--AEYLRV-- 133

Query: 159 GCVAKINPLAPLDKVCI----------------LSCGVSTGLGATLNVAKPERGSSVAVF 202
                  P A  D   +                LS    TG      +A  + G +VAVF
Sbjct: 134 -------PYA--DFNLLKLPDRDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVF 183

Query: 203 GLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT 262
           G G VGL AA  A + GASR+  VD   +R + A+  G    ++ S+ D P+++ I  + 
Sbjct: 184 GAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAIP-IDFSDGD-PVEQ-ILGLE 240

Query: 263 NGGVDRSVECTGNIDNMISAFECV 286
            GGVDR+V+C G        +E  
Sbjct: 241 PGGVDRAVDCVG--------YEAR 256

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375

>gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated

 Score =  117 bits (295), Expect = 5e-30
 Identities = 92/303 (30%), Positives = 142/303 (46%), Gaps = 48/303 (15%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE----SKGQTPLFPRI 67
           KA V  +A   L + DV V  P   +V IK+K T++C TD++ +     ++   P+ P +
Sbjct: 2   KALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPV-PMV 60

Query: 68  FGHEAAGVVESVGEGVSDLEVGDHVLPVFTGE----CGDCRHCRSDVSNMCDLLRINPVR 123
            GHE  G V  VG  V+  +VGD V    +GE    CG CR+CR+   ++C     N  +
Sbjct: 61  VGHEFVGEVVEVGSEVTGFKVGDRV----SGEGHIVCGHCRNCRAGRRHLC----RN-TK 111

Query: 124 GVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI---LSCGV 180
           GV    G          VN       F+EY V+ +  V KI    P D   I       V
Sbjct: 112 GV----G----------VNR---PGAFAEYLVIPAFNVWKIPDDIPDDLAAIFDPFGNAV 154

Query: 181 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 240
            T L  + ++     G  V + G G +G+ AA  A+  GA  ++  D +  R E A+K G
Sbjct: 155 HTAL--SFDLV----GEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMG 208

Query: 241 VTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP 299
            T  VN ++ D  +++V+AE+    G D  +E +G         + ++ G  +A+L G+P
Sbjct: 209 ATRAVNVAKED--LRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAML-GIP 265

Query: 300 SKD 302
             D
Sbjct: 266 PGD 268

Length = 341

>gnl|CDD|176247 cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like

 Score =  117 bits (294), Expect = 5e-30
 Identities = 93/296 (31%), Positives = 125/296 (42%), Gaps = 29/296 (9%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVR---IKIKYTSLCRTDLYFWESKGQTPL-FPRI 67
           +A V    G    I+  EV  P   E     I++  T +C +DL+ +  +G +P   P  
Sbjct: 2   RATVIHGPGD---IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPY--RGVSPTRAPAP 56

Query: 68  FGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVML 127
            GHE  GVVE VG  V+ ++ GD V+  F    G C  CR+  +  C         G  +
Sbjct: 57  IGHEFVGVVEEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGG---FWGAFV 113

Query: 128 ADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGAT 187
             GQ      GE V   L   T  +     S     +  L  L  V      + TG  A 
Sbjct: 114 DGGQ------GEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDV------MGTGHHAA 161

Query: 188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 247
           +  A    GS+V V G GAVGL A   A+  GA RII + R   R   A++FG TD V  
Sbjct: 162 V-SAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIV-A 219

Query: 248 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 302
              +  +  V  E+T G G D  +EC G  ++M  A      G G    VGVP   
Sbjct: 220 ERGEEAVARVR-ELTGGVGADAVLECVGTQESMEQAIAIARPG-GRVGYVGVPHGG 273

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  113 bits (284), Expect = 1e-28
 Identities = 76/247 (30%), Positives = 106/247 (42%), Gaps = 30/247 (12%)

Query: 12  KAAVAWEAGK----PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRI 67
           KA V  + G     PL + +V V  P   EV IK++   +CRTDL+  E     P  P I
Sbjct: 2   KAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLI 61

Query: 68  FGHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVM 126
            GHE  G VE+VG GV+   VGD V +P     CG+CR+CRS   N+CD           
Sbjct: 62  PGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCD----------- 110

Query: 127 LADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGA 186
                      G  V+       ++EY V        I      ++   L C    G  A
Sbjct: 111 ------NARFTGYTVD-----GGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRA 159

Query: 187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 246
            L +A  + G  + ++G GA    A + AR  GA  +    RS +  E A++ G  D+  
Sbjct: 160 -LKLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELG-ADWAG 216

Query: 247 TSEHDRP 253
            S+   P
Sbjct: 217 DSDDLPP 223

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329

>gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase

 Score =  111 bits (280), Expect = 4e-28
 Identities = 94/314 (29%), Positives = 142/314 (45%), Gaps = 46/314 (14%)

Query: 18  EAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDL--YFWESKGQTPL-FPRIFGHEAAG 74
           + G    + +V V  P   EV IK+  TS+C TD+  Y W+   Q+ +  P++ GHE AG
Sbjct: 6   KPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAG 65

Query: 75  VVESVGEGVSDLEVGDHVLPVFTGE----CGDCRHCRSDVSNMCDLLRINPVRGVMLADG 130
            V  +G GV  ++VGD+V    + E    CG C  CR    ++C   +I           
Sbjct: 66  EVVGIGPGVEGIKVGDYV----SVETHIVCGKCYACRRGQYHVCQNTKI----------- 110

Query: 131 QSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI---LSCGVSTGLGAT 187
              F ++ +          F+EY VV +  + K     P +   I   L   V T L   
Sbjct: 111 ---FGVDTDGC--------FAEYAVVPAQNIWKNPKSIPPEYATIQEPLGNAVHTVL--- 156

Query: 188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 247
              A P  G SV V G G +GL A   A+ +GA  +I  D +  R E AKK G T  VN 
Sbjct: 157 ---AGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNP 213

Query: 248 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFM 306
            + D  + + +A++T+G GVD  +E +G    +    + V  G  V++L   P K  +  
Sbjct: 214 FKED--VVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPGGRVSLLGLPPGKVTIDF 271

Query: 307 TKPINVLNERTLKG 320
           T  + +    T+ G
Sbjct: 272 TNKV-IFKGLTIYG 284

This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340

>gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  108 bits (273), Expect = 6e-27
 Identities = 65/252 (25%), Positives = 98/252 (38%), Gaps = 40/252 (15%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHE 71
           K   A +A   L     E  P    +V IKI Y  +C +DL+   ++     +P + GHE
Sbjct: 1   KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHE 60

Query: 72  AAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADG 130
             G+V +VG  V+  +VGD V +      CG C  C+S     C                
Sbjct: 61  IVGIVVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCP--------------- 105

Query: 131 QSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL-- 188
           +   + NG+  +  +    ++++ VV    V KI           L C      G T+  
Sbjct: 106 KGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCA-----GITVYS 160

Query: 189 ----NVAKPERGSSVAVFGLG-----AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF 239
               N   P  G  V V G+G     AV  A A GA       +    RS  + E+A K 
Sbjct: 161 PLKRNGVGP--GKRVGVVGIGGLGHLAVKFAKALGA------EVTAFSRSPSKKEDALKL 212

Query: 240 GVTDFVNTSEHD 251
           G  +F+ T + +
Sbjct: 213 GADEFIATKDPE 224

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score =  103 bits (258), Expect = 7e-27
 Identities = 44/134 (32%), Positives = 66/134 (49%), Gaps = 5/134 (3%)

Query: 206 AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG- 264
            VGLAA + A+  GA+R+I VDRS ++ E AK+ G    +N  + D    E + E+T G 
Sbjct: 1   GVGLAAVQLAKALGAARVIAVDRSEEKLELAKELGADHVINYRDED--FVERVRELTGGR 58

Query: 265 GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFG 324
           GVD  ++C G    +  A E +  G G  V+VG+P    V       +L E T+ G+  G
Sbjct: 59  GVDVVIDCVGAPATLEQALELLRPG-GRVVVVGLPGGAPVPFPLRDLLLKELTILGSLGG 117

Query: 325 NYK-PRTDLPSVVD 337
             +     L  +  
Sbjct: 118 GREEFEEALELLAS 131

Length = 131

>gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain

 Score =  101 bits (253), Expect = 2e-26
 Identities = 41/128 (32%), Positives = 59/128 (46%), Gaps = 22/128 (17%)

Query: 37  EVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVF 96
           EV +++K   +C +DL+ +  +      P I GHE AG+VE VG GV+ L+VGD V+   
Sbjct: 3   EVLVRVKAAGICGSDLHIYRGEPPPVKLPLILGHEGAGIVEEVGPGVTGLKVGDRVVVYP 62

Query: 97  TGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVV 156
              CG C  CR    N+C   +     GV L DG                   F+EY VV
Sbjct: 63  LIPCGKCAACREGRENLCPNGK---FLGVHL-DG------------------GFAEYVVV 100

Query: 157 HSGCVAKI 164
            +  +  +
Sbjct: 101 PARNLVPL 108

This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score =  106 bits (266), Expect = 5e-26
 Identities = 87/334 (26%), Positives = 124/334 (37%), Gaps = 82/334 (24%)

Query: 19  AGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF----PRIFGHEAAG 74
           A   L +++     P   EVR+++    +C +DL++++  G         P + GHE +G
Sbjct: 5   AAGDLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQ-HGGFGTVRLREPMVLGHEVSG 63

Query: 75  VVESVGEGVSDLEVGDHV-----LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLAD 129
           VVE+VG GV+ L  G  V      P     CG C +CR+   N+C  +R           
Sbjct: 64  VVEAVGPGVTGLAPGQRVAVNPSRP-----CGTCDYCRAGRPNLCLNMR----------- 107

Query: 130 GQSRFSINGEPVNHFLGTST--------FSEYTVVH-SGCVAKINPLAPLDKVCILSCGV 180
                         FLG++         F EY VV  S CV              L  G+
Sbjct: 108 --------------FLGSAMRFPHVQGGFREYLVVDASQCVP-------------LPDGL 140

Query: 181 STGLGA----------TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS 230
           S    A           +N A    G  V V G G +G      AR AGA+ I+  D + 
Sbjct: 141 SLRRAALAEPLAVALHAVNRAGDLAGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLAD 200

Query: 231 KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGW 290
                A+  G  + VN +               G  D   E +G    + SA   V  G 
Sbjct: 201 APLAVARAMGADETVNLARDP----LAAYAADKGDFDVVFEASGAPAALASALRVVRPG- 255

Query: 291 GVAVLVGVPSKDAVFMTKPINVL--NERTLKGTF 322
           G  V VG+          P+N L   E  L+G+F
Sbjct: 256 GTVVQVGMLGGPVPL---PLNALVAKELDLRGSF 286

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  104 bits (262), Expect = 1e-25
 Identities = 72/242 (29%), Positives = 112/242 (46%), Gaps = 27/242 (11%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHE 71
           KA    E G PL + + +V  P   EV IK++   +C +D +  E       +PR+ GHE
Sbjct: 2   KAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHE 61

Query: 72  AAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADG 130
             G +++VGEGVS  +VGD V +    G CG C  CR      C+  ++    GV    G
Sbjct: 62  VVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVT---GVTRDGG 118

Query: 131 QSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP-LAPLDKVCILSCGVSTGLGATLN 189
                              ++EY +  +  +A+I   L   +   +L  GV+T      +
Sbjct: 119 -------------------YAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNALRNS 159

Query: 190 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 249
            AKP  G  VAV G+G +G  A + A   G  R + + R S + + A+K G   +++TS+
Sbjct: 160 GAKP--GDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTSK 216

Query: 250 HD 251
            D
Sbjct: 217 ED 218

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333

>gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family

 Score =  105 bits (264), Expect = 2e-25
 Identities = 84/283 (29%), Positives = 121/283 (42%), Gaps = 49/283 (17%)

Query: 16  AWEAGK-----PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK--------GQTP 62
                K      L ++DV V   +  E+ I++K   +C +D++ +E+         G T 
Sbjct: 27  TNLGSKVWRYPELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTE 86

Query: 63  LFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV 122
            FP + GHE +GVVE  G+ V + E GD V       CG CR CRS   N C  L     
Sbjct: 87  -FPVVIGHEFSGVVEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNL----- 140

Query: 123 RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL---DK---VCIL 176
                   +  FS +G           F+EY  V++    +IN L  +   DK      L
Sbjct: 141 -------KELGFSADG----------AFAEYIAVNARYAWEINELREIYSEDKAFEAGAL 183

Query: 177 SCGVSTGLGATLNVA---KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRF 233
               S             +P  G+ V V+G G +GLAA   A+ AGAS++I  + S +R 
Sbjct: 184 VEPTSVAYNGLFIRGGGFRP--GAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERR 241

Query: 234 EEAKKFGVTDFVNTSE-HDRPIQEVIAEMTNG-GVDRSVECTG 274
             AK+ G     N ++  D    E + E+T G G D  VE  G
Sbjct: 242 NLAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAG 284

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score =  102 bits (257), Expect = 6e-25
 Identities = 83/324 (25%), Positives = 124/324 (38%), Gaps = 57/324 (17%)

Query: 12  KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL-FPRIF 68
           KA V  E G P  L + +V    P   EV +++K   +   D+   +         P I 
Sbjct: 2   KAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIP 61

Query: 69  GHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLA 128
           G EAAGVV +VG GV+  +VGD V                               G +  
Sbjct: 62  GSEAAGVVVAVGSGVTGFKVGDRVA----------------------------ALGGVGR 93

Query: 129 DGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL 188
           DG                   ++EY VV +  +  +      ++   L     T   A  
Sbjct: 94  DG------------------GYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALF 135

Query: 189 NVAKPERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 247
           + A  + G +V V G  G VG AA + A+  GA+ +  V  S K  E  K+ G    +N 
Sbjct: 136 DRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKL-ELLKELGADHVINY 194

Query: 248 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFM 306
            E D    E + E+T G GVD  ++  G  D   ++   +  G G  V +G  S      
Sbjct: 195 REED--FVEQVRELTGGKGVDVVLDTVG-GDTFAASLAALAPG-GRLVSIGALSGGPPVP 250

Query: 307 TKPINVLNER-TLKGTFFGNYKPR 329
              + +L +R TL+G   G+  P 
Sbjct: 251 LNLLPLLGKRLTLRGVTLGSRDPE 274

Length = 326

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score =  100 bits (251), Expect = 5e-24
 Identities = 74/268 (27%), Positives = 107/268 (39%), Gaps = 40/268 (14%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHE 71
           KA +     +   I++V    P   EV IK+ Y  LC  DL   +       +P I GHE
Sbjct: 2   KAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHE 61

Query: 72  AAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQ 131
             G VE VGE V   + GD V  +     G C +CRS     C                +
Sbjct: 62  VVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYC----------------K 105

Query: 132 SRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA 191
           +R    GE ++ F     F+EY  V    + K+ P    +   I+ C         L  A
Sbjct: 106 NRLGY-GEELDGF-----FAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRG-LRRA 158

Query: 192 KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT--- 247
             ++G +V V G  G VG+ A + A+  GA ++I V  S  + +   K+   D+V     
Sbjct: 159 GVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKYA--DYVIVGSK 215

Query: 248 -SEHDRPIQEVIAEMTNGGVDRSVECTG 274
            SE  + I         GG D  +E  G
Sbjct: 216 FSEEVKKI---------GGADIVIETVG 234

Length = 334

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score = 99.6 bits (249), Expect = 1e-23
 Identities = 72/267 (26%), Positives = 115/267 (43%), Gaps = 28/267 (10%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAM--EVRIKIKYTSLCRTDLYFWESK-GQTPLFPRIF 68
           KA V    G P +++  ++  P+    EV +++K  +L   DL+      G     P I 
Sbjct: 2   KAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHIL 61

Query: 69  GHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLA 128
           G + AGVVE+VG GV++++ G  V+      CG C +C +   N+C              
Sbjct: 62  GSDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCA------------- 108

Query: 129 DGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL 188
               ++ I GE   H  G   ++EY  V +  +  I      ++         T     +
Sbjct: 109 ----QYGILGE---HVDG--GYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLV 159

Query: 189 NVAKPERGSSVAVFGLGA-VGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 247
             A+   G +V V G G+ VG AA + A++ GA  +I    S  + E AK+ G  D+V  
Sbjct: 160 TRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELG-ADYVID 217

Query: 248 SEHDRPIQEVIAEMTNGGVDRSVECTG 274
              +  ++EV       GVD  VE  G
Sbjct: 218 YRKEDFVREVRELTGKRGVDVVVEHVG 244

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|132409 TIGR03366, HpnZ_proposed, putative phosphonate catabolism associated alcohol dehydrogenase

 Score = 97.2 bits (242), Expect = 4e-23
 Identities = 79/291 (27%), Positives = 115/291 (39%), Gaps = 37/291 (12%)

Query: 67  IFGHEAAGVVESVGEGVSD------LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 120
           + GHE  G V ++  G +       L +G  V+   T  CG C  CR  +   CD LR  
Sbjct: 1   VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLR-- 58

Query: 121 PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI-LSCG 179
                    G                +  ++E+  + +G      P    D V     C 
Sbjct: 59  -------KYGHEALDSGWPL------SGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCA 105

Query: 180 VSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF 239
            +T + A L  A   +G  V V G G +GL AA  A  AGA+R++  D S  R E A  F
Sbjct: 106 TATVM-AALEAAGDLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRRELALSF 164

Query: 240 GVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP 299
           G T     +E +   +         GVD ++E +G    + +  E +  G G AVL G  
Sbjct: 165 GATA---LAEPEVLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAG-- 218

Query: 300 SKDAVFMTKPINVLNERTLKG--TFFG--NYKPRTDLPSVVDMYMNKVIRF 346
              +VF   P+ +  E+ ++   T  G  NY+PR  L   V        RF
Sbjct: 219 ---SVFPGGPVALDPEQVVRRWLTIRGVHNYEPR-HLDQAVRFLAANGQRF 265

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. Length = 280

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score = 95.1 bits (237), Expect = 4e-22
 Identities = 66/285 (23%), Positives = 99/285 (34%), Gaps = 66/285 (23%)

Query: 25  IQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK---GQTPLFPRIFGHEAAGVVESVGE 81
           +++     P   +V ++++   +C +DL  +         P  P   GHE  G V ++G 
Sbjct: 9   VEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGP 68

Query: 82  GVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPV 141
           GV  L VGD V                                                 
Sbjct: 69  GVRGLAVGDRVA------------------------------------------------ 80

Query: 142 NHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV---AKPERGSS 198
              L    F+EY +  +     +  L    +           LG  LNV        G +
Sbjct: 81  --GLSGGAFAEYDLADADHAVPLPSLLD-GQA-----FPGEPLGCALNVFRRGWIRAGKT 132

Query: 199 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVI 258
           VAV G G +GL   + A  AGA R+I +DR   R   A++ G T+ V        I E +
Sbjct: 133 VAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDSEA--IVERV 190

Query: 259 AEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 302
            E+T G G D  +E  G+   +  A E V +  G  V+ G     
Sbjct: 191 RELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGYHQDG 234

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|182229 PRK10083, PRK10083, putative oxidoreductase; Provisional

 Score = 92.5 bits (230), Expect = 4e-21
 Identities = 67/241 (27%), Positives = 103/241 (42%), Gaps = 31/241 (12%)

Query: 23  LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEG 82
           L I++  +  P A EVR+K+K   +C +D + +        +PR+ GHE  GV+++VGEG
Sbjct: 12  LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEG 71

Query: 83  VSDLEVGDHVL--PVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEP 140
           V    +G+ V   PV +  CG C  C     N+C  L    V GV   DG          
Sbjct: 72  VDAARIGERVAVDPVIS--CGHCYPCSIGKPNVCTSLV---VLGVH-RDG---------- 115

Query: 141 VNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVA 200
                    FSEY VV +    +I P A  D+  ++    +     T     P       
Sbjct: 116 --------GFSEYAVVPAKNAHRI-PDAIADQYAVMVEPFTIAANVTGRT-GPTEQDVAL 165

Query: 201 VFGLGAVGLAAAEG-ARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIA 259
           ++G G VGL   +    +     +I  DR  +R   AK+ G    +N ++   P+ E + 
Sbjct: 166 IYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQE--PLGEALE 223

Query: 260 E 260
           E
Sbjct: 224 E 224

Length = 339

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 90.0 bits (224), Expect = 2e-20
 Identities = 71/264 (26%), Positives = 106/264 (40%), Gaps = 58/264 (21%)

Query: 12  KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE-SKGQTPLFPRIF 68
           +A    + G P  L I+++ V  P A EV I+++   L R D  F   +  + P  P   
Sbjct: 2   RAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARL 61

Query: 69  GHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLA 128
           G+EAAGVVE+VG GV+   VGD V  +                                 
Sbjct: 62  GYEAAGVVEAVGAGVTGFAVGDRVSVIPA------------------------------- 90

Query: 129 DGQSRFSINGEPVNHFLGTS-TFSEYTVVHSGCVAKINPLAPLDKVCILSCGVS--TGLG 185
                           LG   T++EY +V +  V K+     L  V   +  +   T  G
Sbjct: 91  --------------ADLGQYGTYAEYALVPAAAVVKLPDG--LSFVEAAALWMQYLTAYG 134

Query: 186 ATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF 244
           A + +A    G SV +     +VGLAA + A  AGA  +I   R+S++ +     G    
Sbjct: 135 ALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHV 193

Query: 245 VNTSEHDRPIQEVIAEMTNG-GVD 267
           + T E D  +   +  +T G GVD
Sbjct: 194 IVTDEED--LVAEVLRITGGKGVD 215

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score = 88.8 bits (221), Expect = 6e-20
 Identities = 66/301 (21%), Positives = 113/301 (37%), Gaps = 66/301 (21%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAM--EVRIKIKYTSLCRTDLYFWESKGQTPL---FPR 66
           KA    E G P +++  +V  P+    EV +K+    +   DL   E   +       P 
Sbjct: 2   KAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPL 61

Query: 67  IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVM 126
           I GH+ AGVV +VG GV+  +VGD V                                  
Sbjct: 62  IPGHDVAGVVVAVGPGVTGFKVGDEVF--------------------------------- 88

Query: 127 LADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP--LAPLDKVCILSCGVSTGL 184
              G + F+  G           ++EY VV +  +A   P  L+  +   +   G+ T  
Sbjct: 89  ---GMTPFTRGG----------AYAEYVVVPADELALK-PANLSFEEAAALPLAGL-TAW 133

Query: 185 GATLNVAKPERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD 243
            A   +   + G +V + G  G VG  A + A+  GA R+I    ++   +  +  G  +
Sbjct: 134 QALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIATASAANA-DFLRSLGADE 191

Query: 244 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAV-LVGVPSKD 302
            ++ ++      +       GGVD  ++  G  + +  +   V  G G  V + G P  +
Sbjct: 192 VIDYTK-----GDFERAAAPGGVDAVLDTVGG-ETLARSLALVKPG-GRLVSIAGPPPAE 244

Query: 303 A 303
            
Sbjct: 245 Q 245

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

 Score = 86.2 bits (214), Expect = 6e-19
 Identities = 77/298 (25%), Positives = 131/298 (43%), Gaps = 40/298 (13%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLY-----FWESKGQTPLFPR 66
           KAAV  +     ++ +  + P +  E  +K++Y  +C TDL+     F +  G      R
Sbjct: 2   KAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGDKTG------R 55

Query: 67  IFGHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGV 125
           I GHE  G+V+ VG GV+ L+VGD V +  F   CG C +C +    +C        R V
Sbjct: 56  ILGHEGIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLC--------RSV 107

Query: 126 MLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI-NPLAPLDKVCILSCGVSTGL 184
             A     ++++G            +E  +V +    K+   L P     I   GV+T  
Sbjct: 108 KNAG----YTVDG----------GMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTT-- 151

Query: 185 GATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF 244
              + V+  + G  +A++G G +G  A + A+    +++I VD +  +   AK+ G    
Sbjct: 152 YKAIKVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNAKVIAVDINDDKLALAKEVGADLT 211

Query: 245 VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 302
           +N+   +  + ++I E   GG   +V           A + V  G G  V VG+P + 
Sbjct: 212 INSKRVE-DVAKIIQE-KTGGAHAAVVTAVAKAAFNQAVDAVRAG-GRVVAVGLPPES 266

Length = 338

>gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase

 Score = 84.8 bits (210), Expect = 2e-18
 Identities = 86/313 (27%), Positives = 131/313 (41%), Gaps = 56/313 (17%)

Query: 16  AWEAGK-PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF----PRIFGH 70
           AW  G   L IQ  ++ P    +VR+++K   +C +D+++ ++  +   F    P + GH
Sbjct: 21  AWLVGVNTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTM-RCADFVVKEPMVIGH 79

Query: 71  EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI--NPVRGVMLA 128
           E AG++E VG  V  L VGD V       C  C  C+    N+C  ++    P       
Sbjct: 80  ECAGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATP------- 132

Query: 129 DGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI--------LSCGV 180
                  ++G   N            VVH   +    P    + V +        LS GV
Sbjct: 133 ------PVHGSLANQ-----------VVHPADLCFKLP----ENVSLEEGAMCEPLSVGV 171

Query: 181 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 240
                A +    PE  ++V V G G +GL     AR  GA RI+ VD   +R   AK+ G
Sbjct: 172 HACRRANIG---PE--TNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLG 226

Query: 241 VTDFVNTSEHDRPIQEVIAEMTN---GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVG 297
             + V  S +   ++  + E+     GG+D S +C G    M +A E    G G   LVG
Sbjct: 227 ADEIVLVSTNIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVG 285

Query: 298 VPSKDAVFMTKPI 310
           +   +   MT P+
Sbjct: 286 MGHNE---MTVPL 295

Length = 364

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score = 82.3 bits (204), Expect = 6e-18
 Identities = 62/239 (25%), Positives = 86/239 (35%), Gaps = 71/239 (29%)

Query: 63  LFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV 122
             P   G+ + G V  VG GV+  + GD    VF        H                 
Sbjct: 19  PLPLPPGYSSVGRVVEVGSGVTGFKPGDR---VFCF----GPH----------------- 54

Query: 123 RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 182
                                       +E  VV +  +  +    P +          T
Sbjct: 55  ----------------------------AERVVVPANLLVPLPDGLPPE------RAALT 80

Query: 183 GLGAT-LN---VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK 238
            L AT LN    A+P  G  VAV GLG VGL AA+ A+ AGA  ++GVD  + R E A+ 
Sbjct: 81  ALAATALNGVRDAEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEA 140

Query: 239 FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVG 297
            G  D V          +   E+   G D  +E +G+   + +A   + D  G  VLVG
Sbjct: 141 LGPADPVA--------ADTADEIGGRGADVVIEASGSPSALETALRLLRDR-GRVVLVG 190

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score = 80.7 bits (200), Expect = 4e-17
 Identities = 80/330 (24%), Positives = 120/330 (36%), Gaps = 70/330 (21%)

Query: 12  KAAVAWEA-GKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK--GQTPLFPRIF 68
           KAAV     G  L++ DV V  P   EV +K+K  +L   D   W+ +  G  P +P I 
Sbjct: 2   KAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVD---WKHQDYGFIPSYPAIL 58

Query: 69  GHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLA 128
           G + AG V  VG GV+  +VGD V        G                           
Sbjct: 59  GCDFAGTVVEVGSGVTRFKVGDRV-------AGFVHGGNP-------------------- 91

Query: 129 DGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST---GLG 185
                         +      F EY V  +   AKI      ++   L  G+ T    L 
Sbjct: 92  --------------NDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALF 137

Query: 186 ATLNVAKP-------ERGSSVAVFGLG--AVGLAAAEGARIAGASRIIGVDRSSKRFEEA 236
             L +  P        +G  V ++G G  +VG  A + A++AG  ++I    S K F+  
Sbjct: 138 QKLGLPLPPPKPSPASKGKPVLIWG-GSSSVGTLAIQLAKLAGY-KVITT-ASPKNFDLV 194

Query: 237 KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWG--VAV 294
           K  G     +   HD  + E I   T G +  +++C    ++     E +    G  +  
Sbjct: 195 KSLGADAVFDY--HDPDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKLVS 252

Query: 295 LVGVPSKDAVFMTKPINVLNERTLKGTFFG 324
           L+ VP +          V  +  L  T FG
Sbjct: 253 LLPVPEETE----PRKGVKVKFVLGYTVFG 278

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|176218 cd08256, Zn_ADH2, Alcohol dehydrogenases of the MDR family

 Score = 80.9 bits (200), Expect = 5e-17
 Identities = 71/269 (26%), Positives = 111/269 (41%), Gaps = 49/269 (18%)

Query: 25  IQDVEVAPPQAMEVRIKIKYTSLCRTDL-------YFWESKGQTPLF--PRIFGHEAAGV 75
           +++V V  P   E+ +K++   +C  D+        FW  + Q P    P I GHE  G 
Sbjct: 14  LEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGR 73

Query: 76  VESVGEGVSD--LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI----NPVRGVMLAD 129
           V  +GEG  +  ++VGD V+      C +CR C      MC    +    N V G M   
Sbjct: 74  VVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGM--- 130

Query: 130 GQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI---LSCGVSTGLGA 186
                    E +        F +  +VH     K+    P +   +   L+C +      
Sbjct: 131 --------AEYM-------RFPKEAIVH-----KVPDDIPPEDAILIEPLACALH----- 165

Query: 187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 246
            ++ A  +    V + G G +GL     AR+    ++I +D   +R   A+KFG    +N
Sbjct: 166 AVDRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLN 225

Query: 247 TSEHDRPIQEVIAEMTNG-GVDRSVECTG 274
             E D  + E I E+T G G D  +E TG
Sbjct: 226 PPEVD--VVEKIKELTGGYGCDIYIEATG 252

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 350

>gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional

 Score = 77.6 bits (191), Expect = 5e-16
 Identities = 64/246 (26%), Positives = 102/246 (41%), Gaps = 39/246 (15%)

Query: 37  EVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVF 96
           +V +K+  + LC +D+      G    +P   GHE +G VE+VG GV DL  GD V  V 
Sbjct: 27  DVLVKVASSGLCGSDIPRIFKNG-AHYYPITLGHEFSGYVEAVGSGVDDLHPGDAVACVP 85

Query: 97  TGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTF---SEY 153
              C  C  C     ++C                             F+G+      +EY
Sbjct: 86  LLPCFTCPECLRGFYSLCAKY-------------------------DFIGSRRDGGNAEY 120

Query: 154 TVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAE 213
            VV    +  +    P++    +   ++ GL A  ++A+   G +V + G G +GL A +
Sbjct: 121 IVVKRKNLFALPTDMPIEDGAFIE-PITVGLHA-FHLAQGCEGKNVIIIGAGTIGLLAIQ 178

Query: 214 GARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRP-IQEVIAE-------MTNGG 265
            A   GA  +  +D +S++   AK  G     N+ E   P IQ V+ E       +   G
Sbjct: 179 CAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSREMSAPQIQSVLRELRFDQLILETAG 238

Query: 266 VDRSVE 271
           V ++VE
Sbjct: 239 VPQTVE 244

Length = 347

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score = 76.5 bits (189), Expect = 1e-15
 Identities = 75/290 (25%), Positives = 104/290 (35%), Gaps = 77/290 (26%)

Query: 12  KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFG 69
           +A    E G P  L + D+ V  P   EV +++  + +   D Y                
Sbjct: 2   RAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVP 61

Query: 70  H-EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLA 128
             + AGVVE+VGEGV  L+VGD    V+    G  R                        
Sbjct: 62  GSDGAGVVEAVGEGVDGLKVGD---RVWLTNLGWGRR----------------------- 95

Query: 129 DGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL 188
                               T +EY VV            P D++  L  GVS   GA L
Sbjct: 96  ------------------QGTAAEYVVV------------PADQLVPLPDGVSFEQGAAL 125

Query: 189 NV------------AKPERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEE 235
            +            A  + G +V V G  GAVG AA + AR AGA R+I    S++  E 
Sbjct: 126 GIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAEL 184

Query: 236 AKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFE 284
            ++ G     N    D  + + I   T G GVD  +E   N  N+    +
Sbjct: 185 VRQAGADAVFNYRAED--LADRILAATAGQGVDVIIEVLAN-VNLAKDLD 231

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 76.4 bits (189), Expect = 1e-15
 Identities = 87/352 (24%), Positives = 137/352 (38%), Gaps = 65/352 (18%)

Query: 23  LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL---FPRIFGHEAAGVVESV 79
           L + +  V  P   EV +++   SL   DL      G+ P     P I   + AG V +V
Sbjct: 15  LKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLI--LNGRYPPPVKDPLIPLSDGAGEVVAV 72

Query: 80  GEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSR---FSI 136
           GEGV+  +VGD V+P F                       N + G   A+ ++      I
Sbjct: 73  GEGVTRFKVGDRVVPTF---------------------FPNWLDGPPTAEDEASALGGPI 111

Query: 137 NGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERG 196
           +G            +EY V+    + +       ++   L C   T   A   +   + G
Sbjct: 112 DG----------VLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKPG 161

Query: 197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQE 256
            +V V G G V L A + A+ AGA R+I    S ++ E AK  G    +N        +E
Sbjct: 162 DTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINYRTTPDWGEE 220

Query: 257 VIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-- 313
           V+ ++T G GVD  VE  G    +  + + V  G GV  L+G  S        P+ +L  
Sbjct: 221 VL-KLTGGRGVDHVVE-VGGPGTLAQSIKAVAPG-GVISLIGFLSGFEA----PVLLLPL 273

Query: 314 --NERTLKGTFFGNYK---------PRTDLPSVVDMYMNKVIRFSSSRPSFR 354
                TL+G   G+               +  V+D    +V  F  ++ ++R
Sbjct: 274 LTKGATLRGIAVGSRAQFEAMNRAIEAHRIRPVID----RVFPFEEAKEAYR 321

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score = 76.0 bits (188), Expect = 2e-15
 Identities = 72/261 (27%), Positives = 104/261 (39%), Gaps = 57/261 (21%)

Query: 12  KAAVAWEAGKPLIIQDVEVAP-PQAM-EVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIF 68
           KA V  E G P  +   EV P P A  EVRI+++   +   DL   + K Q  P  P + 
Sbjct: 2   KAVVCKELGGPEDLVLEEVPPEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVP 61

Query: 69  GHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLA 128
           G E AGVVE+VGEGV+  +VGD V                                    
Sbjct: 62  GSEVAGVVEAVGEGVTGFKVGDRV-------VA--------------------------- 87

Query: 129 DGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL 188
                            G   F+E  VV +  V  +      ++   L     T   A +
Sbjct: 88  ---------------LTGQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALV 132

Query: 189 NVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 247
             A+ + G +V V G  G VGLAA + A+  GA R+I    S ++   A+  G    ++ 
Sbjct: 133 RRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVIDY 191

Query: 248 SEHDRPIQEVIAEMTNG-GVD 267
            + D  ++E +  +T G GVD
Sbjct: 192 RDPD--LRERVKALTGGRGVD 210

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|132245 TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

 Score = 74.6 bits (183), Expect = 7e-15
 Identities = 87/351 (24%), Positives = 145/351 (41%), Gaps = 48/351 (13%)

Query: 18  EAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDL-YFWESKGQTPLFPRIFGHEAAGVV 76
           E GKP++   VE+    A +V +K+    +C TDL Y++         P   GHE +G V
Sbjct: 6   EPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRV 65

Query: 77  ESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSI 136
              G G +   +G  V+      CG+C  C++    +C   R   + G  +  G      
Sbjct: 66  IQAGAGAASW-IGKAVIVPAVIPCGECELCKTGRGTIC---RAQKMPGNDMQGG------ 115

Query: 137 NGEPVNHFLGTSTFSEYTVVHSG--CVAKINPLA----PLDKVCILSCGVSTGLGATLNV 190
                        F+ + VV +   CV     LA    PL+ V +++  V+T   A +  
Sbjct: 116 -------------FASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAAVQ- 161

Query: 191 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH 250
           A  ++G  V V G G VG    + A+  GA+ ++ +D   ++ E  K FG    +N  + 
Sbjct: 162 AGLKKGDLVIVIGAGGVGGYMVQTAKAMGAA-VVAIDIDPEKLEMMKGFGADLTLNPKDK 220

Query: 251 D-RPIQEVIAEMTNGGVDRS-----VECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV 304
             R ++++I         RS      EC+G+     SA   +  G G  V+VG       
Sbjct: 221 SAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG-GTLVVVGYTMAKTE 279

Query: 305 FMTKPINVLNERTLKGTFFGNYKPRTDL-PSVVDMYMNKVIR---FSSSRP 351
           +    +   + R L     GN+    D  P+ +D+ ++  I+   F   RP
Sbjct: 280 YRLSNLMAFHARAL-----GNWGCPPDRYPAALDLVLDGKIQLGPFVERRP 325

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 349

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 71.9 bits (177), Expect = 5e-14
 Identities = 70/303 (23%), Positives = 110/303 (36%), Gaps = 60/303 (19%)

Query: 16  AWEAGKP-----LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGH 70
           AW   KP     L ++++E+  P A EV +K+    L   D            +P + G 
Sbjct: 3   AWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGV 62

Query: 71  EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADG 130
           + AGVV +VG  V+  +VGD V                                 +   G
Sbjct: 63  DGAGVVVAVGAKVTGWKVGDRVA----------------------------YHASLARGG 94

Query: 131 QSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV 190
                             +F+EYTVV +  V  +      ++   L C   T   A    
Sbjct: 95  ------------------SFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKK 136

Query: 191 AKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 249
            + E G ++ + G  G VG  A + A+ AG  R+I    S + FE  K  G    ++   
Sbjct: 137 LRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVI-TTCSKRNFEYVKSLGADHVID--Y 192

Query: 250 HDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP--SKDAVFM 306
           +D  + E I E+T G GVD  ++  G  +   +    +     +  + G P  S D  F 
Sbjct: 193 NDEDVCERIKEITGGRGVDAVLDTVGG-ETAAALAPTLAFNGHLVCIQGRPDASPDPPFT 251

Query: 307 TKP 309
              
Sbjct: 252 RAL 254

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 71.1 bits (175), Expect = 8e-14
 Identities = 70/274 (25%), Positives = 105/274 (38%), Gaps = 64/274 (23%)

Query: 14  AVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAA 73
           A+  + G  L ++D+    P   E  +++    +C TDL  +  KG  P FP + GHE  
Sbjct: 3   ALVLDGGLDLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIY--KGYYP-FPGVPGHEFV 59

Query: 74  GVVESVGEG--VSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQ 131
           G+VE   E   V    VG+  +      CG C +CR  +   C      P R V+   G 
Sbjct: 60  GIVEEGPEAELVGKRVVGEINIA-----CGRCEYCRRGLYTHC------PNRTVL---GI 105

Query: 132 SRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG-------L 184
                +G           F+EY               PL+ + ++   V          L
Sbjct: 106 VDR--DG----------AFAEYLT------------LPLENLHVVPDLVPDEQAVFAEPL 141

Query: 185 GATLNV---AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV 241
            A L +        G  VAV G G +GL  A+   + G   ++ V R S++   A++ GV
Sbjct: 142 AAALEILEQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALARRLGV 200

Query: 242 TDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN 275
                       +    AE   GG D  VE TG+
Sbjct: 201 E----------TVLPDEAESEGGGFDVVVEATGS 224

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase

 Score = 71.4 bits (175), Expect = 9e-14
 Identities = 84/305 (27%), Positives = 128/305 (41%), Gaps = 50/305 (16%)

Query: 37  EVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHV-LPV 95
           +V IK+ Y  +C TDL+  ++      +P + GHE  G V  VG  VS   VGD V + V
Sbjct: 36  DVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGV 95

Query: 96  FTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTV 155
             G CG+C  C+SD+   C+  RI     V           +G+P         F+   V
Sbjct: 96  IVGCCGECSPCKSDLEQYCN-KRIWSYNDVY---------TDGKPTQ-----GGFASAMV 140

Query: 156 VHSGCVAKI-NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEG 214
           V    V KI   +AP     +L  GV T      +    + G    + GLG VG    + 
Sbjct: 141 VDQKFVVKIPEGMAPEQAAPLLCAGV-TVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKI 199

Query: 215 ARIAGASRIIGVDRSSKRFEEA-KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT 273
           A+  G   +  +  S K+ EEA +  G  D++ +S+         AEM         E  
Sbjct: 200 AKAMG-HHVTVISSSDKKREEALEHLGADDYLVSSD--------AAEMQ--------EAA 242

Query: 274 GNIDNMISAFECVH-----------DGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTF 322
            ++D +I      H           D  G  +L+GV +    F+T P+ +L  + + G+F
Sbjct: 243 DSLDYIIDTVPVFHPLEPYLSLLKLD--GKLILMGVINTPLQFVT-PMLMLGRKVITGSF 299

Query: 323 FGNYK 327
            G+ K
Sbjct: 300 IGSMK 304

Length = 357

>gnl|CDD|234025 TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenase, glutathione-independent

 Score = 71.0 bits (174), Expect = 1e-13
 Identities = 72/247 (29%), Positives = 113/247 (45%), Gaps = 29/247 (11%)

Query: 38  VRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFT 97
           V +K+  T++C +D +    +   P    + GHE  G V   G  V  +++GD V   F 
Sbjct: 36  VILKVVTTNICGSDQHMVRGRTTAPT-GLVLGHEITGEVIEKGRDVEFIKIGDIVSVPFN 94

Query: 98  GECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVH 157
             CG CR+C+   + +C  L +NP R    A     +   G     ++G    SEY +V 
Sbjct: 95  IACGRCRNCKEGHTGVC--LNVNPAR----AGAAYGYVDMGG----WVGGQ--SEYVMVP 142

Query: 158 SGCVAKINPLAPLDK---------VCILSCGVSTGL-GATLNVAKPERGSSVAVFGLGAV 207
               A  N L   D+         + +LS    TG  GA      P  GS+V + G G V
Sbjct: 143 ---YADFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGAVTAGVGP--GSTVYIAGAGPV 197

Query: 208 GLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVD 267
           GLAAA  A++ GA+ +I  D +  R  +A+ FG  + V+ S+     +++   +    VD
Sbjct: 198 GLAAAASAQLLGAAVVIVGDLNPARLAQARSFGC-ETVDLSKDATLPEQIEQILGEPEVD 256

Query: 268 RSVECTG 274
            +V+C G
Sbjct: 257 CAVDCVG 263

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent [Central intermediary metabolism, One-carbon metabolism]. Length = 393

>gnl|CDD|176192 cd08230, glucose_DH, Glucose dehydrogenase

 Score = 69.9 bits (172), Expect = 2e-13
 Identities = 84/315 (26%), Positives = 117/315 (37%), Gaps = 69/315 (21%)

Query: 14  AVAWEAGKP-LIIQDVEVAPPQAMEVRIKIKYTSLCRTD------LYFWESKGQTPLFPR 66
           A+A + GKP + + D+    P   EV ++     +C TD       Y     G+  L   
Sbjct: 3   AIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFL--- 59

Query: 67  IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMC---DLLRINPVR 123
           + GHEA GVVE VG+G S L  GD V+P      G C +CR    + C   +       R
Sbjct: 60  VLGHEALGVVEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYT----ER 114

Query: 124 GVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 183
           G+    G  R     +P           EY V       K+ P   L  V +L       
Sbjct: 115 GIKGLHGFMREYFVDDP-----------EYLV-------KVPP--SLADVGVL------- 147

Query: 184 LGATLNVAK-------------PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS 230
           L     V K                     V G G +GL AA   R+ G   +  ++R  
Sbjct: 148 LEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRD 206

Query: 231 KRFEEAK---KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH 287
               +A    + G T +VN+S+   P+ EV      G  D  +E TG       A   + 
Sbjct: 207 PPDPKADIVEELGAT-YVNSSKT--PVAEVKLV---GEFDLIIEATGVPPLAFEALPALA 260

Query: 288 DGWGVAVLVGVPSKD 302
              GV +L GVP   
Sbjct: 261 PN-GVVILFGVPGGG 274

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 355

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score = 69.4 bits (171), Expect = 3e-13
 Identities = 68/273 (24%), Positives = 96/273 (35%), Gaps = 83/273 (30%)

Query: 12  KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL-FPRIF 68
           KA    + G P  L  +DV V  P   EV ++     +   D YF    G  PL  P + 
Sbjct: 1   KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYF--RSGLYPLPLPFVL 58

Query: 69  GHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLA 128
           G E AGVVE+VG GV+  +VGD V   + G                              
Sbjct: 59  GVEGAGVVEAVGPGVTGFKVGDRV--AYAG------------------------------ 86

Query: 129 DGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL 188
                                ++EY VV +  + K+              G+S    A L
Sbjct: 87  -----------------PPGAYAEYRVVPASRLVKLPD------------GISDETAAAL 117

Query: 189 ------------NVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE 235
                            + G +V V    G VGL   + A+  GA  +IG   S ++ E 
Sbjct: 118 LLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAEL 176

Query: 236 AKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVD 267
           A+  G    +N  + D    E + E+T G GVD
Sbjct: 177 ARAAGADHVINYRDED--FVERVREITGGRGVD 207

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score = 67.4 bits (165), Expect = 2e-12
 Identities = 59/212 (27%), Positives = 86/212 (40%), Gaps = 32/212 (15%)

Query: 23  LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEG 82
           L ++DV+   P   EV I++K   +   D     +    P+ P I G E AGVVE VG+ 
Sbjct: 14  LKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVKVKPM-PHIPGAEFAGVVEEVGDH 72

Query: 83  VSDLEVGDHVL---PVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGE 139
           V  ++ GD V+    VF    G C  C S    +C     N     ++++G         
Sbjct: 73  VKGVKKGDRVVVYNRVF---DGTCDMCLSGNEMLCR----NGGIIGVVSNG--------- 116

Query: 140 PVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV 199
                     ++EY VV    + KI      +    L     T   A L  A    G +V
Sbjct: 117 ---------GYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHA-LKTAGLGPGETV 166

Query: 200 AVFGL-GAVGLAAAEGARIAGASRIIGVDRSS 230
            VFG  G  G+ A + A++ GA  +I V R  
Sbjct: 167 VVFGASGNTGIFAVQLAKMMGA-EVIAVSRKD 197

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 66.5 bits (163), Expect = 3e-12
 Identities = 72/345 (20%), Positives = 116/345 (33%), Gaps = 69/345 (20%)

Query: 14  AVAWEAGKP--LIIQDVEVAPPQAM--EVRIKIKYTSLCRTDLYFWESKGQTPL---FPR 66
            V    G P  L++ +VEV  P     EV +K+   S+   D        +  L   FP 
Sbjct: 1   VVYTRYGSPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPP 60

Query: 67  IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVM 126
           I G + AG V +VG GV+  +VGD V     G                         G  
Sbjct: 61  IPGMDFAGEVVAVGSGVTRFKVGDEVF----GRLPPKGG------------------G-- 96

Query: 127 LADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP-LAPLDKVCILSCGVSTGLG 185
                                   +EY V     +AK    ++  +   +   G+ T L 
Sbjct: 97  ----------------------ALAEYVVAPESGLAKKPEGVSFEEAAALPVAGL-TALQ 133

Query: 186 ATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF 244
           A  +  K + G  V + G  G VG  A + A+  GA  + GV  S++  E  +  G  + 
Sbjct: 134 ALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA-HVTGVC-STRNAELVRSLGADEV 191

Query: 245 VNTSEHDRPIQEVIAEMTNGGV-DRSVECTGNIDNMISAFECVHDGW--GVAVLVGVPSK 301
           ++ +  D      +A    G   D   +  GN     S +         G  V VG    
Sbjct: 192 IDYTTED-----FVALTAGGEKYDVIFDAVGNSP--FSLYRASLALKPGGRYVSVGGGPS 244

Query: 302 DAVFMTKPINVLNERTLKGTFFGNYKP-RTDLPSVVDMYMNKVIR 345
             + +   + +      +   F   KP   DL  + ++     ++
Sbjct: 245 GLLLVLLLLPLTLGGGGRRLKFFLAKPNAEDLEQLAELVEEGKLK 289

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family

 Score = 66.6 bits (163), Expect = 3e-12
 Identities = 59/279 (21%), Positives = 96/279 (34%), Gaps = 54/279 (19%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG---QTPLFPR-- 66
           +AAV  +   PL+++DV    P   +V +K+    +C +DL+              P   
Sbjct: 2   RAAVFRDG--PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLM 59

Query: 67  ------IFGHEAAGVVESVGEGVS-DLEVGDHV--LPVFTGECGDCRHCRSDVSNMCDLL 117
                 + GHE  G V   G G    L+VG  V  LP+    CG    C   +S      
Sbjct: 60  DLGADIVLGHEFCGEVVDYGPGTERKLKVGTRVTSLPLLL--CGQGASCGIGLSPE---- 113

Query: 118 RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILS 177
                            +  G           ++EY ++    + ++     ++   +  
Sbjct: 114 -----------------APGG-----------YAEYMLLSEALLLRVPDGLSMEDAALTE 145

Query: 178 CGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK 237
             ++ GL A +  A+   G    V G G +GLA     +  G   I+  D S +R   A 
Sbjct: 146 -PLAVGLHA-VRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALAL 203

Query: 238 KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV--ECTG 274
             G    V+ +               GG   +V  EC G
Sbjct: 204 AMGADIVVDPAADSPFAAWAAELARAGGPKPAVIFECVG 242

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase

 Score = 65.3 bits (159), Expect = 8e-12
 Identities = 54/217 (24%), Positives = 87/217 (40%), Gaps = 22/217 (10%)

Query: 37  EVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHV-LPV 95
           +V +KI Y  +C +DL+  +++     +P + GHE  G+V  +G+ V   + GD V + V
Sbjct: 39  DVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVKKFKEGDRVGVGV 98

Query: 96  FTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYT- 154
             G C  C  C  D+ N C                +  F+ N    +   GT  +  Y+ 
Sbjct: 99  IVGSCKSCESCDQDLENYCP---------------KMIFTYNSIGHD---GTKNYGGYSD 140

Query: 155 --VVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAA 212
             VV    V +     PLD    L C   T           E G  + V GLG +G  A 
Sbjct: 141 MIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAV 200

Query: 213 EGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 249
           +  +  G    +    S+K  E   + G   F+ +++
Sbjct: 201 KIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTD 237

Length = 360

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score = 62.2 bits (152), Expect = 7e-11
 Identities = 61/299 (20%), Positives = 114/299 (38%), Gaps = 73/299 (24%)

Query: 12  KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFG 69
           KA V  + G P  L ++++ +  P+   V I++K   L R++++  +    +  FPR+ G
Sbjct: 2   KAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLG 61

Query: 70  HEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLAD 129
            EA G VE    G      G  V                  + M  + R           
Sbjct: 62  IEAVGEVEEAPGG--TFTPGQRV-----------------ATAMGGMGR----------- 91

Query: 130 GQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGA--- 186
                + +G          +++EYT+V +  V  I+      ++  L     T  G+   
Sbjct: 92  -----TFDG----------SYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFR 136

Query: 187 TLNVAKPE----RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 242
           +L +   +    RG + +V GL A+ LA A GA +   +      RS +R    K+ G  
Sbjct: 137 SLGLQPGDTLLIRGGTSSV-GLAALKLAKALGATVTATT------RSPERAALLKELGAD 189

Query: 243 D-FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN--IDNMISAFECVHDGWGVAVLVGV 298
           +  ++       ++        GG D+ +E  G   + +   +   +  G G+  + G+
Sbjct: 190 EVVIDDGAIAEQLRAA-----PGGFDKVLELVGTATLKD---SLRHLRPG-GIVCMTGL 239

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|177834 PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase

 Score = 62.7 bits (152), Expect = 7e-11
 Identities = 56/219 (25%), Positives = 91/219 (41%), Gaps = 19/219 (8%)

Query: 37  EVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHV-LPV 95
           +V +KI +  +C +DL+  ++      +P I GHE  G+   VG+ V+  + GD V + V
Sbjct: 33  DVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGV 92

Query: 96  FTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTV 155
             G C  C  C  D+ N C                +  F+ N    +       +S+  V
Sbjct: 93  IIGSCQSCESCNQDLENYCP---------------KVVFTYNSRSSDGTRNQGGYSDVIV 137

Query: 156 VHSGCVAKINPLAPLDKVCILSC-GVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEG 214
           V    V  I    P D    L C G++            E G  + V GLG +G  A + 
Sbjct: 138 VDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKI 197

Query: 215 ARIAGASRIIGVDRSSKRFEEA-KKFGVTDFVNTSEHDR 252
            +  G  R+  + RSS++  EA  + G   F+ T++  +
Sbjct: 198 GKAFGL-RVTVISRSSEKEREAIDRLGADSFLVTTDSQK 235

Length = 375

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 58.0 bits (141), Expect = 2e-09
 Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 7/86 (8%)

Query: 12 KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL---FPR 66
          KA V    G P    +++V    P   +V +++  + +   D      +G        P 
Sbjct: 2  KALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKI--RRGGAAARPPLPA 59

Query: 67 IFGHEAAGVVESVGEGVSDLEVGDHV 92
          I G + AGVVE+VGEGV+   VGD V
Sbjct: 60 ILGCDVAGVVEAVGEGVTRFRVGDEV 85

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score = 57.6 bits (140), Expect = 2e-09
 Identities = 54/233 (23%), Positives = 82/233 (35%), Gaps = 55/233 (23%)

Query: 37  EVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVF 96
           EV +++K   L   D+    + G  P      G E +G+V  VG GV+ L+VGD V+   
Sbjct: 2   EVEVEVKAAGLNFRDVLV--ALGLLPGDETPLGLECSGIVTRVGSGVTGLKVGDRVM--- 56

Query: 97  TGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVV 156
                                                           L    F+ +  V
Sbjct: 57  -----------------------------------------------GLAPGAFATHVRV 69

Query: 157 HSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVF-GLGAVGLAAAEGA 215
            +  V KI      ++   L     T   A +++A+ ++G SV +    G VG AA + A
Sbjct: 70  DARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLA 129

Query: 216 RIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVD 267
           +  GA     V    KR    +  G  D + +S  D    + I   T G GVD
Sbjct: 130 QHLGAEVFATVGSEEKREFLRELGGPVDHIFSS-RDLSFADGILRATGGRGVD 181

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score = 57.3 bits (139), Expect = 3e-09
 Identities = 53/259 (20%), Positives = 85/259 (32%), Gaps = 62/259 (23%)

Query: 23  LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE-----SKGQTPLFPRIFGHEAAGVVE 77
           L I +     P+  +V IK+    + R D    +       G +     I G E AG VE
Sbjct: 16  LKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSE----ILGLEVAGYVE 71

Query: 78  SVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSIN 137
            VG  V   + GD V+ +  G                                       
Sbjct: 72  DVGSDVKRFKEGDRVMALLPG--------------------------------------- 92

Query: 138 GEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGS 197
                       ++EY V H G V  I      ++   +     T           ++G 
Sbjct: 93  ----------GGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQ 142

Query: 198 SVAVF-GLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQE 256
           SV +  G   VG AAA+ A   GA+ II    S ++ +  KK      +   + +     
Sbjct: 143 SVLIHAGASGVGTAAAQLAEKYGAATIITTS-SEEKVDFCKKLAAIILIRYPD-EEGFAP 200

Query: 257 VIAEMTNG-GVDRSVECTG 274
            + ++T   GV+  ++C G
Sbjct: 201 KVKKLTGEKGVNLVLDCVG 219

Length = 334

>gnl|CDD|182130 PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional

 Score = 55.8 bits (135), Expect = 9e-09
 Identities = 72/294 (24%), Positives = 122/294 (41%), Gaps = 42/294 (14%)

Query: 38  VRIKIKYTSLCRTDLYFWESKGQTPLF----PRIFGHEAAGVVESVGEGVSDLEVGDHVL 93
             ++I    +C +DL++++ +G+   F    P + GHE  G +       S L+ G  V 
Sbjct: 30  TLVQITRGGICGSDLHYYQ-EGKVGNFVIKAPMVLGHEVIGKIVHSDS--SGLKEGQTVA 86

Query: 94  PVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFS--INGEPVNHFLGTSTFS 151
              +  CG C++C S   N C  +R           G + +   ++G           F+
Sbjct: 87  INPSKPCGHCKYCLSHNENQCTTMRFF---------GSAMYFPHVDG----------GFT 127

Query: 152 EYTVVHSG-CVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLA 210
            Y VV +  C+    P    +KV   +  ++  + A  + A   +G  V V G+G +G  
Sbjct: 128 RYKVVDTAQCIPY--PEKADEKVMAFAEPLAVAIHA-AHQAGDLQGKRVFVSGVGPIGCL 184

Query: 211 AAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV 270
                +  GA+ I+  D S +    A++ G    VN    +  +    AE   G  D S 
Sbjct: 185 IVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQ--NDDLDHYKAE--KGYFDVSF 240

Query: 271 ECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL--NERTLKGTF 322
           E +G+  ++ +  E V    GV V VG+      F   P+  L   E +LKG+F
Sbjct: 241 EVSGHPSSINTCLE-VTRAKGVMVQVGMGGAPPEF---PMMTLIVKEISLKGSF 290

Length = 343

>gnl|CDD|131869 TIGR02822, adh_fam_2, zinc-binding alcohol dehydrogenase family protein

 Score = 54.2 bits (130), Expect = 3e-08
 Identities = 37/109 (33%), Positives = 52/109 (47%), Gaps = 12/109 (11%)

Query: 16  AWEAGKPLIIQD-------VEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF-PRI 67
           AWE  +P  I+D         V  P   E+ ++++   +CRTDL+   S+G  P+  PR+
Sbjct: 1   AWEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHV--SEGDLPVHRPRV 58

Query: 68  F-GHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMC 114
             GHE  G V   G       VGD V +      CG CR+CR    N+C
Sbjct: 59  TPGHEVVGEVAGRGADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLC 107

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized [Energy metabolism, Fermentation]. Length = 329

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score = 53.8 bits (130), Expect = 4e-08
 Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 9/84 (10%)

Query: 21 KPLIIQDVEVA--PPQAMEVRIKIKYTSLCRTDLYFWESKGQ----TPLFPRIFGHEAAG 74
           PL+++ V +   PP   EV +++    +  +DL      G      PL P + G+E  G
Sbjct: 10 LPLVLELVSLPIPPPGPGEVLVRMLAAPINPSDLI--TISGAYGSRPPL-PAVPGNEGVG 66

Query: 75 VVESVGEGVSDLEVGDHVLPVFTG 98
          VV  VG GVS L VG  VLP+   
Sbjct: 67 VVVEVGSGVSGLLVGQRVLPLGGE 90

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|176252 cd08292, ETR_like_2, 2-enoyl thioester reductase (ETR) like proteins, child 2

 Score = 53.1 bits (128), Expect = 7e-08
 Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 8/87 (9%)

Query: 12 KAAVAWEAGKP---LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFW---ESKGQTPLFP 65
          +AAV  + G P   L I +V    P A EV ++   + +   DL  W    + G  P  P
Sbjct: 2  RAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDL--WTIRGTYGYKPELP 59

Query: 66 RIFGHEAAGVVESVGEGVSDLEVGDHV 92
           I G EA GVV++VGEGV  L+VG  V
Sbjct: 60 AIGGSEAVGVVDAVGEGVKGLQVGQRV 86

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase

 Score = 52.0 bits (125), Expect = 1e-07
 Identities = 33/72 (45%), Positives = 41/72 (56%), Gaps = 2/72 (2%)

Query: 29 EVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE 87
          EVAPP   EVRI+++  SL   DL        T P +P   G EA+GVV +VG  V+ L 
Sbjct: 1  EVAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLA 60

Query: 88 VGDHVLPVFTGE 99
          VGD V+   TGE
Sbjct: 61 VGDEVI-AGTGE 71

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303

>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 51.8 bits (125), Expect = 2e-07
 Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 11/75 (14%)

Query: 25 IQDVEVAPPQAMEVRIKIKYTSL------CRTDLYFWESKGQTPLFPRIFGHEAAGVVES 78
          ++   +  P + EVR++++   L       R  LY        P  P + G E AG VE+
Sbjct: 16 VEKEALPEPSSGEVRVRVEACGLNFADLMARQGLY-----DSAPKPPFVPGFECAGTVEA 70

Query: 79 VGEGVSDLEVGDHVL 93
          VGEGV D +VGD V+
Sbjct: 71 VGEGVKDFKVGDRVM 85

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176209 cd08247, AST1_like, AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

 Score = 51.5 bits (124), Expect = 3e-07
 Identities = 58/260 (22%), Positives = 93/260 (35%), Gaps = 71/260 (27%)

Query: 37  EVRIKIKYTSLCRTDL-----YFWESKGQTPLFPRIFGHEAAGVVESVGEGV-SDLEVGD 90
           E+ +K+   +L   DL     Y +  K +     +  G + +GV+  VG  V S+ +VGD
Sbjct: 30  EIVVKVHAAALNPVDLKLYNSYTFHFKVK----EKGLGRDYSGVIVKVGSNVASEWKVGD 85

Query: 91  HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNH------- 143
            V       CG   H       +   L ++P         + + SI  +P N        
Sbjct: 86  EV-------CGIYPHPYGGQGTLSQYLLVDP--------KKDKKSITRKPENISLEEAAA 130

Query: 144 ---FLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVA 200
               LGT+    Y ++          L P  KV +L        G +         +SV 
Sbjct: 131 WPLVLGTA----YQILED----LGQKLGPDSKVLVL--------GGS---------TSV- 164

Query: 201 VFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR--PIQEVI 258
             G  A+ LA            ++G   SS+  E  KK G   F++   H     ++ V+
Sbjct: 165 --GRFAIQLAKNHYN----IGTVVGTC-SSRSAELNKKLGADHFIDYDAHSGVKLLKPVL 217

Query: 259 -AEMTNGGVDRSVECTGNID 277
                 G  D  ++C G  D
Sbjct: 218 ENVKGQGKFDLILDCVGGYD 237

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 352

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score = 49.9 bits (120), Expect = 7e-07
 Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 11/74 (14%)

Query: 25 IQDVEVAPPQAMEVRIKIKYTSLCRTDL------YFWESKGQTPLFPRIFGHEAAGVVES 78
          I DV V  P   EV +K ++  +  +D+      Y     G  P F    G E  G V +
Sbjct: 20 IVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYD---PGVKPPFD--CGFEGVGEVVA 74

Query: 79 VGEGVSDLEVGDHV 92
          VGEGV+D +VGD V
Sbjct: 75 VGEGVTDFKVGDAV 88

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score = 50.1 bits (121), Expect = 7e-07
 Identities = 33/86 (38%), Positives = 43/86 (50%), Gaps = 7/86 (8%)

Query: 12 KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFP---R 66
          KA V  E G P  L + +V    P   EV I++    + R DL   + +G  P  P    
Sbjct: 2  KAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLL--QRQGLYPPPPGASD 59

Query: 67 IFGHEAAGVVESVGEGVSDLEVGDHV 92
          I G E AGVV +VG GV+  +VGD V
Sbjct: 60 ILGLEVAGVVVAVGPGVTGWKVGDRV 85

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members

 Score = 48.7 bits (117), Expect = 2e-06
 Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 5/86 (5%)

Query: 12 KAAVAWEAGK---PLIIQDVEVAPPQA--MEVRIKIKYTSLCRTDLYFWESKGQTPLFPR 66
          KA    +      P  + D+E+  P     ++ ++++  S+   D          P  P+
Sbjct: 2  KAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPK 61

Query: 67 IFGHEAAGVVESVGEGVSDLEVGDHV 92
          I G +A+GVVE+VG  V+  +VGD V
Sbjct: 62 ILGWDASGVVEAVGSEVTLFKVGDEV 87

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336

>gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional

 Score = 48.6 bits (116), Expect = 2e-06
 Identities = 29/75 (38%), Positives = 37/75 (49%), Gaps = 2/75 (2%)

Query: 20 GKPLIIQDVEVAP--PQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVE 77
          G P ++Q VE  P  P   EV+++ K   +   D Y        P  P   G EAAGVV 
Sbjct: 11 GGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVS 70

Query: 78 SVGEGVSDLEVGDHV 92
           VG GV  ++VGD V
Sbjct: 71 KVGSGVKHIKVGDRV 85

Length = 327

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score = 48.4 bits (116), Expect = 2e-06
 Identities = 16/34 (47%), Positives = 20/34 (58%)

Query: 61 TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLP 94
          TP  P + G+E  G V  VG GV  L+ GD V+P
Sbjct: 60 TPEPPAVGGNEGVGEVVKVGSGVKSLKPGDWVIP 93

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 46.1 bits (110), Expect = 1e-05
 Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 1/71 (1%)

Query: 23 LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG-QTPLFPRIFGHEAAGVVESVGE 81
          L + + ++  P A EV +K++ + +   D+          P  P   G++  G V+++G 
Sbjct: 15 LKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGS 74

Query: 82 GVSDLEVGDHV 92
          GV+  EVGD V
Sbjct: 75 GVTGFEVGDRV 85

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score = 45.5 bits (109), Expect = 2e-05
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 3/59 (5%)

Query: 40 IKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTG 98
          I+++   L   D+    + G  P    + G E AGVV  VG GV+ L VGD V+ +  G
Sbjct: 1  IEVRAAGLNFRDVLI--ALGLYP-GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLAPG 56

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 45.8 bits (109), Expect = 2e-05
 Identities = 64/270 (23%), Positives = 90/270 (33%), Gaps = 57/270 (21%)

Query: 26  QDVEVAPPQAMEVRIKIKYTSLCRTDL--------------------YFWESKGQTPLFP 65
            DV V  P   EV I++    +  TD+                          G T  FP
Sbjct: 19  DDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFP 78

Query: 66  RIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGV 125
           RI G +  G V +VGEGV    +G+ VL V        R    D     D +        
Sbjct: 79  RIQGADIVGRVVAVGEGVDTARIGERVL-VDPSI----RDPPEDDPADIDYI-------- 125

Query: 126 MLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLG 185
               G  R   +G           F+EYTVV +     +N      ++    C  ST   
Sbjct: 126 ----GSER---DG----------GFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAEN 168

Query: 186 ATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF 244
             L  A    G +V V G  G VG A  + A+  GA  +I V  ++K  E  +  G    
Sbjct: 169 -MLERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAVAGAAKE-EAVRALGADTV 225

Query: 245 VNTSEHDRPIQEVIAEMTNGGVDRSVECTG 274
           +          + +       VD   +  G
Sbjct: 226 ILRDAPLLADAKALGG---EPVDVVADVVG 252

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family

 Score = 44.6 bits (106), Expect = 4e-05
 Identities = 35/86 (40%), Positives = 44/86 (51%), Gaps = 7/86 (8%)

Query: 12 KAAVAWEAGKPLIIQDVEVAPPQ--AMEVRIKIKYTSLCRTDLYFWESKGQTPLFP---R 66
          KA    E G P ++  VEV  P   A EV I++    + R DL   +  G+ P  P    
Sbjct: 2  KAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLL--QRAGKYPPPPGASD 59

Query: 67 IFGHEAAGVVESVGEGVSDLEVGDHV 92
          I G E AG V +VGEGVS  +VGD V
Sbjct: 60 ILGLEVAGEVVAVGEGVSRWKVGDRV 85

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325

>gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1

 Score = 41.8 bits (99), Expect = 4e-04
 Identities = 19/71 (26%), Positives = 26/71 (36%), Gaps = 15/71 (21%)

Query: 37  EVRIKIKYTSLCRTD---------------LYFWESKGQTPLFPRIFGHEAAGVVESVGE 81
           +V IK+   S+   D                     K     FP   G + +GVV  +G 
Sbjct: 31  QVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRDCSGVVVDIGS 90

Query: 82  GVSDLEVGDHV 92
           GV   E+GD V
Sbjct: 91  GVKSFEIGDEV 101

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350

>gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase

 Score = 41.6 bits (98), Expect = 4e-04
 Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 41/196 (20%)

Query: 67  IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVM 126
           I G +A+G+V +VGEGV + +VGD V+           HC     N  +    +P    M
Sbjct: 84  IGGSDASGIVWAVGEGVKNWKVGDEVVV----------HCSVWDGNDPERAGGDP----M 129

Query: 127 LADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG-CVAKINPLAPLDKVCILSCGVSTGLG 185
               Q    I G   N+     +F+++ +V +   + K   L+  +            +G
Sbjct: 130 FDPSQ---RIWGYETNY----GSFAQFALVQATQLMPKPKHLSWEEAAAY------MLVG 176

Query: 186 ATL---------NVAKPERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEE 235
           AT          N  KP  G +V ++G  G +G  A + AR AGA   + V  S ++ E 
Sbjct: 177 ATAYRMLFGWNPNTVKP--GDNVLIWGASGGLGSMAIQLARAAGA-NPVAVVSSEEKAEY 233

Query: 236 AKKFGVTDFVNTSEHD 251
            +  G    +N  + D
Sbjct: 234 CRALGAEGVINRRDFD 249

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 41.1 bits (97), Expect = 5e-04
 Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 13/127 (10%)

Query: 178 CGVSTGLGA--TLN-VAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRF 233
           C V   + A   L+  AK   G  V + G  G VG A  E A +AGA  + G   S +  
Sbjct: 119 CLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA-EVYGTA-SERNH 176

Query: 234 EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVA 293
              ++ G T     ++   P     A +T GGVD   +  G  ++   ++  +  G G  
Sbjct: 177 AALRELGATPIDYRTKDWLP-----AMLTPGGVDVVFDGVG-GESYEESYAALAPG-GTL 229

Query: 294 VLVGVPS 300
           V  G  S
Sbjct: 230 VCYGGNS 236

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1

 Score = 40.7 bits (96), Expect = 8e-04
 Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 6/76 (7%)

Query: 21 KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL---FPRIFGHEAAGVVE 77
          K L + + EV  P   EV IK++   +  +DL F   KGQ       P   G E +G V 
Sbjct: 16 KELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGF--LKGQYGSTKALPVPPGFEGSGTVV 73

Query: 78 SVGEG-VSDLEVGDHV 92
          + G G ++   +G  V
Sbjct: 74 AAGGGPLAQSLIGKRV 89

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	361
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	100.0
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	100.0
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	100.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	100.0
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	100.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	100.0
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	100.0
PLN02740	381	Alcohol dehydrogenase-like	100.0
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	100.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	100.0
PLN02827	378	Alcohol dehydrogenase-like	100.0
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	100.0
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	100.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	100.0
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	100.0
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	100.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	100.0
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	100.0
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	100.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	100.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	100.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	100.0
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	100.0
PLN02514	357	cinnamyl-alcohol dehydrogenase	100.0
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	100.0
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	100.0
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	100.0
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	100.0
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	100.0
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	100.0
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	100.0
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	100.0
PRK10083	339	putative oxidoreductase; Provisional	100.0
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	100.0
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	100.0
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	100.0
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	100.0
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	100.0
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	100.0
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	100.0
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	100.0
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	100.0
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	100.0
PLN02702	364	L-idonate 5-dehydrogenase	100.0
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	100.0
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	100.0
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	100.0
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	100.0
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	100.0
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	100.0
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	100.0
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	100.0
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	100.0
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	100.0
PRK13771	334	putative alcohol dehydrogenase; Provisional	100.0
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	100.0
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	100.0
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	100.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	100.0
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	100.0
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	100.0
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	100.0
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	100.0
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	100.0
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	100.0
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	100.0
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	100.0
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	100.0
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	100.0
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	100.0
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	100.0
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	100.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	100.0
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	100.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	100.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	100.0
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	100.0
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	100.0
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	100.0
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	100.0
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	100.0
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	100.0
PTZ00354	334	alcohol dehydrogenase; Provisional	100.0
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	100.0
COG2130	340	Putative NADP-dependent oxidoreductases [General f	100.0
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	100.0
cd08252	336	AL_MDR Arginate lyase and other MDR family members	100.0
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	100.0
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	100.0
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	100.0
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	100.0
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	100.0
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	100.0
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	100.0
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	100.0
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	99.98
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	99.98
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	99.97
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	99.97
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	99.97
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	99.97
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	99.97
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	99.97
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	99.97
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	99.97
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	99.97
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	99.97
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	99.97
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	99.97
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	99.96
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	99.96
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	99.96
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	99.95
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	99.94
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.93
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	99.9
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.89
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.77
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	99.4
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	99.24
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.65
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.44
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	98.33
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	98.31
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.21
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	98.2
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	98.19
PLN02494	477	adenosylhomocysteinase	98.16
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	98.12
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	98.1
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	98.08
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	98.03
PRK08324	681	short chain dehydrogenase; Validated	97.87
PTZ00075	476	Adenosylhomocysteinase; Provisional	97.85
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	97.76
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	97.74
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.64
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	97.57
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.54
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	97.51
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.49
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	97.49
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	97.39
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	97.37
PRK06182	273	short chain dehydrogenase; Validated	97.34
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.32
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	97.25
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	97.22
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	97.21
PRK05993	277	short chain dehydrogenase; Provisional	97.16
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	97.12
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	97.12
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	97.11
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	97.1
TIGR00438	188	rrmJ cell division protein FtsJ.	97.08
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	97.04
PRK05693	274	short chain dehydrogenase; Provisional	97.04
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	97.03
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	97.02
PLN03209	576	translocon at the inner envelope of chloroplast su	97.0
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	96.98
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.93
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	96.91
PRK07326	237	short chain dehydrogenase; Provisional	96.91
PRK12828	239	short chain dehydrogenase; Provisional	96.9
PRK04148	134	hypothetical protein; Provisional	96.9
PRK12742	237	oxidoreductase; Provisional	96.9
COG0300	265	DltE Short-chain dehydrogenases of various substra	96.87
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.85
PRK08017	256	oxidoreductase; Provisional	96.78
PRK08265	261	short chain dehydrogenase; Provisional	96.76
PRK14967	223	putative methyltransferase; Provisional	96.76
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	96.76
PF11017	314	DUF2855: Protein of unknown function (DUF2855); In	96.75
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	96.75
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	96.75
PRK08177	225	short chain dehydrogenase; Provisional	96.75
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	96.74
COG2264	300	PrmA Ribosomal protein L11 methylase [Translation,	96.74
PRK06057	255	short chain dehydrogenase; Provisional	96.73
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.71
PRK06139	330	short chain dehydrogenase; Provisional	96.7
PRK07806	248	short chain dehydrogenase; Provisional	96.69
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.63
PRK07109	334	short chain dehydrogenase; Provisional	96.63
PRK07060	245	short chain dehydrogenase; Provisional	96.63
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	96.62
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	96.6
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.58
PRK12939	250	short chain dehydrogenase; Provisional	96.57
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.56
PRK06953	222	short chain dehydrogenase; Provisional	96.56
COG4122	219	Predicted O-methyltransferase [General function pr	96.56
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.55
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	96.54
TIGR01318	467	gltD_gamma_fam glutamate synthase small subunit fa	96.53
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.53
PRK07814	263	short chain dehydrogenase; Provisional	96.5
PRK05872	296	short chain dehydrogenase; Provisional	96.5
PRK00811	283	spermidine synthase; Provisional	96.49
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	96.48
PRK06949	258	short chain dehydrogenase; Provisional	96.47
PLN02366	308	spermidine synthase	96.46
PF06325	295	PrmA: Ribosomal protein L11 methyltransferase (Prm	96.45
PLN02780	320	ketoreductase/ oxidoreductase	96.44
PRK08267	260	short chain dehydrogenase; Provisional	96.42
CHL00194	317	ycf39 Ycf39; Provisional	96.41
PRK07831	262	short chain dehydrogenase; Provisional	96.4
PRK12829	264	short chain dehydrogenase; Provisional	96.4
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.39
PRK12809	639	putative oxidoreductase Fe-S binding subunit; Revi	96.38
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	96.38
PRK07825	273	short chain dehydrogenase; Provisional	96.36
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	96.36
PRK06841	255	short chain dehydrogenase; Provisional	96.36
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	96.36
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.33
COG2519	256	GCD14 tRNA(1-methyladenosine) methyltransferase an	96.33
PRK07832	272	short chain dehydrogenase; Provisional	96.31
PRK07402	196	precorrin-6B methylase; Provisional	96.31
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.3
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	96.29
PRK08339	263	short chain dehydrogenase; Provisional	96.28
PRK09186	256	flagellin modification protein A; Provisional	96.28
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.27
PRK06180	277	short chain dehydrogenase; Provisional	96.27
PRK05867	253	short chain dehydrogenase; Provisional	96.25
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.25
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	96.23
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	96.22
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	96.21
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.2
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	96.2
PLN02781	234	Probable caffeoyl-CoA O-methyltransferase	96.19
PRK05866	293	short chain dehydrogenase; Provisional	96.19
PRK06196	315	oxidoreductase; Provisional	96.19
PRK07774	250	short chain dehydrogenase; Provisional	96.18
PRK06484	520	short chain dehydrogenase; Validated	96.18
PRK08263	275	short chain dehydrogenase; Provisional	96.18
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.17
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.15
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.14
PRK12769	654	putative oxidoreductase Fe-S binding subunit; Revi	96.13
PRK06128	300	oxidoreductase; Provisional	96.11
PRK09291	257	short chain dehydrogenase; Provisional	96.11
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	96.08
PRK06500	249	short chain dehydrogenase; Provisional	96.07
COG3288	356	PntA NAD/NADP transhydrogenase alpha subunit [Ener	96.07
PRK07024	257	short chain dehydrogenase; Provisional	96.07
PRK00312	212	pcm protein-L-isoaspartate O-methyltransferase; Re	96.06
PRK09072	263	short chain dehydrogenase; Provisional	96.06
PRK00536	262	speE spermidine synthase; Provisional	96.05
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.05
PRK07062	265	short chain dehydrogenase; Provisional	96.04
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	96.04
PRK06483	236	dihydromonapterin reductase; Provisional	96.03
PRK08317	241	hypothetical protein; Provisional	96.01
PRK07478	254	short chain dehydrogenase; Provisional	96.01
PRK07677	252	short chain dehydrogenase; Provisional	96.01
PRK08628	258	short chain dehydrogenase; Provisional	96.0
PLN03075	296	nicotianamine synthase; Provisional	95.99
PLN02476	278	O-methyltransferase	95.99
PRK11207	197	tellurite resistance protein TehB; Provisional	95.99
PRK07890	258	short chain dehydrogenase; Provisional	95.98
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	95.97
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	95.97
PRK05854	313	short chain dehydrogenase; Provisional	95.97
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	95.96
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.96
PRK04457	262	spermidine synthase; Provisional	95.95
PRK01581	374	speE spermidine synthase; Validated	95.94
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	95.94
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	95.93
PRK07454	241	short chain dehydrogenase; Provisional	95.91
PRK07523	255	gluconate 5-dehydrogenase; Provisional	95.89
PRK08703	239	short chain dehydrogenase; Provisional	95.89
COG2910	211	Putative NADH-flavin reductase [General function p	95.88
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	95.88
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.86
PF08704	247	GCD14: tRNA methyltransferase complex GCD14 subuni	95.86
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	95.85
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	95.84
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	95.83
PRK05884	223	short chain dehydrogenase; Provisional	95.83
PRK06194	287	hypothetical protein; Provisional	95.82
PLN02253	280	xanthoxin dehydrogenase	95.82
PRK06198	260	short chain dehydrogenase; Provisional	95.81
PRK07453	322	protochlorophyllide oxidoreductase; Validated	95.81
PRK08589	272	short chain dehydrogenase; Validated	95.81
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	95.81
PRK08340	259	glucose-1-dehydrogenase; Provisional	95.8
PF13659	117	Methyltransf_26: Methyltransferase domain; PDB: 3G	95.79
PRK06482	276	short chain dehydrogenase; Provisional	95.79
PRK07063	260	short chain dehydrogenase; Provisional	95.78
PRK07985	294	oxidoreductase; Provisional	95.76
PRK07904	253	short chain dehydrogenase; Provisional	95.76
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.76
PRK08213	259	gluconate 5-dehydrogenase; Provisional	95.76
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	95.75
PRK06172	253	short chain dehydrogenase; Provisional	95.75
PRK05717	255	oxidoreductase; Validated	95.75
PRK06179	270	short chain dehydrogenase; Provisional	95.75
PRK06138	252	short chain dehydrogenase; Provisional	95.74
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	95.74
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	95.73
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	95.72
PRK08618	325	ornithine cyclodeaminase; Validated	95.72
PRK07856	252	short chain dehydrogenase; Provisional	95.72
PRK11036	255	putative S-adenosyl-L-methionine-dependent methylt	95.7
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	95.7
PRK07576	264	short chain dehydrogenase; Provisional	95.67
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.67
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	95.66
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	95.66
PRK08226	263	short chain dehydrogenase; Provisional	95.64
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	95.64
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	95.64
PRK07035	252	short chain dehydrogenase; Provisional	95.63
PRK07067	257	sorbitol dehydrogenase; Provisional	95.63
PRK10538	248	malonic semialdehyde reductase; Provisional	95.63
PRK05562	223	precorrin-2 dehydrogenase; Provisional	95.63
PRK08643	256	acetoin reductase; Validated	95.63
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	95.62
PRK06197	306	short chain dehydrogenase; Provisional	95.61
PRK06181	263	short chain dehydrogenase; Provisional	95.61
PRK12367	245	short chain dehydrogenase; Provisional	95.6
TIGR00138	181	gidB 16S rRNA methyltransferase GidB. GidB (glucos	95.59
PRK12937	245	short chain dehydrogenase; Provisional	95.59
TIGR00563	426	rsmB ribosomal RNA small subunit methyltransferase	95.57
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	95.57
PRK07074	257	short chain dehydrogenase; Provisional	95.56
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	95.56
PRK08862	227	short chain dehydrogenase; Provisional	95.55
PRK08264	238	short chain dehydrogenase; Validated	95.54
PRK05876	275	short chain dehydrogenase; Provisional	95.54
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	95.54
PRK12548	289	shikimate 5-dehydrogenase; Provisional	95.53
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	95.53
PRK06125	259	short chain dehydrogenase; Provisional	95.52
PRK08277	278	D-mannonate oxidoreductase; Provisional	95.52
PRK08328	231	hypothetical protein; Provisional	95.51
PRK05875	276	short chain dehydrogenase; Provisional	95.5
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	95.49
TIGR00417	270	speE spermidine synthase. the SpeE subunit of sper	95.49
PRK14103	255	trans-aconitate 2-methyltransferase; Provisional	95.49
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	95.47
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	95.47
COG0569	225	TrkA K+ transport systems, NAD-binding component [	95.46
PRK01683	258	trans-aconitate 2-methyltransferase; Provisional	95.45
PRK08085	254	gluconate 5-dehydrogenase; Provisional	95.45
PRK08251	248	short chain dehydrogenase; Provisional	95.44
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	95.43
PLN02823	336	spermine synthase	95.43
PRK08219	227	short chain dehydrogenase; Provisional	95.43
PRK06940	275	short chain dehydrogenase; Provisional	95.42
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	95.42
PRK09242	257	tropinone reductase; Provisional	95.42
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	95.42
KOG0725	270	consensus Reductases with broad range of substrate	95.41
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.41
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	95.41
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	95.4
PRK07577	234	short chain dehydrogenase; Provisional	95.4
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	95.38
PRK06398	258	aldose dehydrogenase; Validated	95.38
PRK06914	280	short chain dehydrogenase; Provisional	95.35
PRK07340	304	ornithine cyclodeaminase; Validated	95.33
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	95.31
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	95.29
PRK06114	254	short chain dehydrogenase; Provisional	95.26
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	95.26
PRK08287	187	cobalt-precorrin-6Y C(15)-methyltransferase; Valid	95.24
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	95.24
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	95.24
PRK06720	169	hypothetical protein; Provisional	95.23
PRK06124	256	gluconate 5-dehydrogenase; Provisional	95.22
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	95.22
PRK10669	558	putative cation:proton antiport protein; Provision	95.21
PRK04266	226	fibrillarin; Provisional	95.19
PRK06484	520	short chain dehydrogenase; Validated	95.17
TIGR00477	195	tehB tellurite resistance protein TehB. Part of a	95.17
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	95.16
PLN02244	340	tocopherol O-methyltransferase	95.16
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	95.15
PRK06101	240	short chain dehydrogenase; Provisional	95.15
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.15
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	95.14
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	95.13
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	95.12
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	95.11
PRK07102	243	short chain dehydrogenase; Provisional	95.1
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	95.1
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	95.1
TIGR00446	264	nop2p NOL1/NOP2/sun family putative RNA methylase.	95.1
PRK00121	202	trmB tRNA (guanine-N(7)-)-methyltransferase; Revie	95.1
PRK07574	385	formate dehydrogenase; Provisional	95.09
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	95.06
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.03
PRK03562	621	glutathione-regulated potassium-efflux system prot	95.02
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	95.01
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	95.01
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	95.0
PTZ00098	263	phosphoethanolamine N-methyltransferase; Provision	94.98
PRK07791	286	short chain dehydrogenase; Provisional	94.94
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.93
PRK14903	431	16S rRNA methyltransferase B; Provisional	94.88
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	94.87
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	94.87
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	94.86
PRK08303	305	short chain dehydrogenase; Provisional	94.84
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.83
PRK03612	521	spermidine synthase; Provisional	94.82
PRK06523	260	short chain dehydrogenase; Provisional	94.82
PLN02589	247	caffeoyl-CoA O-methyltransferase	94.82
PLN00203	519	glutamyl-tRNA reductase	94.8
COG1648	210	CysG Siroheme synthase (precorrin-2 oxidase/ferroc	94.78
TIGR02752	231	MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone me	94.75
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	94.74
PRK07097	265	gluconate 5-dehydrogenase; Provisional	94.73
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	94.73
PRK03659	601	glutathione-regulated potassium-efflux system prot	94.7
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	94.69
PF01596	205	Methyltransf_3: O-methyltransferase; InterPro: IPR	94.69
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	94.68
PLN03139	386	formate dehydrogenase; Provisional	94.67
COG0421	282	SpeE Spermidine synthase [Amino acid transport and	94.67
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	94.67
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	94.66
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	94.65
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	94.63
PRK08278	273	short chain dehydrogenase; Provisional	94.62
PLN02256	304	arogenate dehydrogenase	94.61
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.56
PRK07411	390	hypothetical protein; Validated	94.55
PF01408	120	GFO_IDH_MocA: Oxidoreductase family, NAD-binding R	94.55
PRK07417	279	arogenate dehydrogenase; Reviewed	94.54
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	94.53
COG0673	342	MviM Predicted dehydrogenases and related proteins	94.53
PRK06035	291	3-hydroxyacyl-CoA dehydrogenase; Validated	94.52
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	94.51
PRK14902	444	16S rRNA methyltransferase B; Provisional	94.51
PRK00216	239	ubiE ubiquinone/menaquinone biosynthesis methyltra	94.51
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	94.5
PRK09135	249	pteridine reductase; Provisional	94.5
PRK05650	270	short chain dehydrogenase; Provisional	94.49
PLN02490	340	MPBQ/MSBQ methyltransferase	94.48
PLN02233	261	ubiquinone biosynthesis methyltransferase	94.46
PRK11579	346	putative oxidoreductase; Provisional	94.43
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	94.43
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	94.42
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	94.42
PRK12814	652	putative NADPH-dependent glutamate synthase small	94.39
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	94.39
PRK12747	252	short chain dehydrogenase; Provisional	94.37
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	94.36
PRK08223	287	hypothetical protein; Validated	94.36
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	94.35
cd05211	217	NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of	94.35
PRK14968	188	putative methyltransferase; Provisional	94.33
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	94.31
PRK05855	582	short chain dehydrogenase; Validated	94.31
PRK10901	427	16S rRNA methyltransferase B; Provisional	94.3
PRK12938	246	acetyacetyl-CoA reductase; Provisional	94.27
PRK12743	256	oxidoreductase; Provisional	94.27
PRK12779	944	putative bifunctional glutamate synthase subunit b	94.27
PRK13984	604	putative oxidoreductase; Provisional	94.27
PRK06701	290	short chain dehydrogenase; Provisional	94.26
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	94.25
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	94.24
PRK06141	314	ornithine cyclodeaminase; Validated	94.24
TIGR03215	285	ac_ald_DH_ac acetaldehyde dehydrogenase (acetylati	94.22
PRK07775	274	short chain dehydrogenase; Provisional	94.22
PRK11188	209	rrmJ 23S rRNA methyltransferase J; Provisional	94.21
TIGR02415	254	23BDH acetoin reductases. One member of this famil	94.21
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	94.2
PRK05708	305	2-dehydropantoate 2-reductase; Provisional	94.2
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	94.19
COG0031	300	CysK Cysteine synthase [Amino acid transport and m	94.18
PRK08300	302	acetaldehyde dehydrogenase; Validated	94.17
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	94.09
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	94.09
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.06
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	94.05
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.04
PRK13243	333	glyoxylate reductase; Reviewed	94.03
PLN02928	347	oxidoreductase family protein	94.02
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.01
PF13823	23	ADH_N_assoc: Alcohol dehydrogenase GroES-associate	94.01
PRK13255	218	thiopurine S-methyltransferase; Reviewed	93.99
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	93.98

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=5e-63  Score=452.36  Aligned_cols=317  Identities=33%  Similarity=0.525  Sum_probs=285.6

Q ss_pred             ccceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 018072            8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLE   87 (361)
Q Consensus         8 ~~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~   87 (361)
                      |.+|||+++.++++++++++++.|+|+++||+|||+++|||++|++.+.|.++...+|++||||++|+|+++|++|+.|+
T Consensus         1 ~~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~~k   80 (339)
T COG1064           1 MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTGLK   80 (339)
T ss_pred             CcceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCccCC
Confidence            46899999999999999999999999999999999999999999999999999889999999999999999999999999


Q ss_pred             CCCEEee-cCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCC
Q 018072           88 VGDHVLP-VFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP  166 (361)
Q Consensus        88 ~Gd~V~~-~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~  166 (361)
                      +||||.+ ....+|++|++|++|++++|++....   |.+         .+          |+||||+++|+.++++||+
T Consensus        81 ~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~---gy~---------~~----------GGyaeyv~v~~~~~~~iP~  138 (339)
T COG1064          81 VGDRVGVGWLVISCGECEYCRSGNENLCPNQKIT---GYT---------TD----------GGYAEYVVVPARYVVKIPE  138 (339)
T ss_pred             CCCEEEecCccCCCCCCccccCcccccCCCcccc---cee---------ec----------CcceeEEEEchHHeEECCC
Confidence            9999998 99999999999999999999997766   433         22          3899999999999999999


Q ss_pred             CCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEc
Q 018072          167 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  246 (361)
Q Consensus       167 ~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~  246 (361)
                      ++++++||.+.|+..|.|+++ +..+++||++|+|+|+|++|++++|+|+++|+ +|++++++++|+++++++|++++++
T Consensus       139 ~~d~~~aApllCaGiT~y~al-k~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~  216 (339)
T COG1064         139 GLDLAEAAPLLCAGITTYRAL-KKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVIN  216 (339)
T ss_pred             CCChhhhhhhhcCeeeEeeeh-hhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEE
Confidence            999999999999999999996 55999999999999999999999999999997 9999999999999999999999999


Q ss_pred             CCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeecC
Q 018072          247 TSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGN  325 (361)
Q Consensus       247 ~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~~  325 (361)
                      ..+.+  ..+.++..    +|+++|+++ +.+++.+++.|+++ |+++++|.........++...++ ++++|.|+..++
T Consensus       217 ~~~~~--~~~~~~~~----~d~ii~tv~-~~~~~~~l~~l~~~-G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~  288 (339)
T COG1064         217 SSDSD--ALEAVKEI----ADAIIDTVG-PATLEPSLKALRRG-GTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGT  288 (339)
T ss_pred             cCCch--hhHHhHhh----CcEEEECCC-hhhHHHHHHHHhcC-CEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCC
Confidence            77433  55566553    999999999 79999999999998 99999998852222334445444 999999999888


Q ss_pred             CCcCCcHHHHHHHHHcCCc------------------ccCCCCcceeEEEEe
Q 018072          326 YKPRTDLPSVVDMYMNKVI------------------RFSSSRPSFRCVIII  359 (361)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~l------------------~~~~~~~~~~~vl~~  359 (361)
                         +.|+++++++..++++                  ++++.+.+||.||++
T Consensus       289 ---~~d~~e~l~f~~~g~Ikp~i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~  337 (339)
T COG1064         289 ---RADLEEALDFAAEGKIKPEILETIPLDEINEAYERMEKGKVRGRAVIDM  337 (339)
T ss_pred             ---HHHHHHHHHHHHhCCceeeEEeeECHHHHHHHHHHHHcCCeeeEEEecC
Confidence               4899999999999988                  456678889988875

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=100.00  E-value=3.8e-60  Score=424.36  Aligned_cols=339  Identities=48%  Similarity=0.852  Sum_probs=320.5

Q ss_pred             cceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 018072            9 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV   88 (361)
Q Consensus         9 ~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~   88 (361)
                      +++||++.+++++||+++|+++++|+++|||||+.++|+||+|...++|..+.. +|.++|||++|+|+++|++|+++++
T Consensus         1 mk~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~-~P~vLGHEgAGiVe~VG~gVt~vkp   79 (366)
T COG1062           1 MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVLGHEGAGIVEAVGEGVTSVKP   79 (366)
T ss_pred             CCceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC-CceecccccccEEEEecCCccccCC
Confidence            468999999999999999999999999999999999999999999999988866 9999999999999999999999999


Q ss_pred             CCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCC
Q 018072           89 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA  168 (361)
Q Consensus        89 Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~  168 (361)
                      ||+|+..+.-+|++|..|.+|..|+|...+-..-.|.. .+|...++.+|.+.+++.+.++|+||.+++...++|++++.
T Consensus        80 GDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m-~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~  158 (366)
T COG1062          80 GDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTM-PDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDA  158 (366)
T ss_pred             CCEEEEcccCCCCCCchhhCCCcccccchhhhcccccc-cCCceeeecCCcceeeeeccccchhheeecccceEECCCCC
Confidence            99999999999999999999999999987777666744 89988999999999999999999999999999999999999


Q ss_pred             ChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCC
Q 018072          169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  248 (361)
Q Consensus       169 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~  248 (361)
                      +++.++++.|...|.+.+..+.+++++|++|.|+|.|++|++++|-|+..|+.+||++|.+++|++++++||+++++|..
T Consensus       159 p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~  238 (366)
T COG1062         159 PLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPK  238 (366)
T ss_pred             CccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecch
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             CCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCCCc
Q 018072          249 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP  328 (361)
Q Consensus       249 ~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~  328 (361)
                      +.. ++.+.+.+++++|+|.+||++|+.+.++++++++.+. |+.+++|.......+++++..+..+.+++|+++|+...
T Consensus       239 ~~~-~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~-G~~v~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G~~~p  316 (366)
T COG1062         239 EVD-DVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRG-GTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGARP  316 (366)
T ss_pred             hhh-hHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcC-CeEEEEecCCCCceeecChHHeeccceEEEEeecCCcc
Confidence            763 4899999999999999999999999999999999995 99999999988888989988888779999999999888


Q ss_pred             CCcHHHHHHHHHcCCcccCCCCc
Q 018072          329 RTDLPSVVDMYMNKVIRFSSSRP  351 (361)
Q Consensus       329 ~~~~~~~~~~~~~~~l~~~~~~~  351 (361)
                      +.+++++++++++|+|++++...
T Consensus       317 ~~diP~lv~~y~~Gkl~~d~lvt  339 (366)
T COG1062         317 RSDIPRLVDLYMAGKLPLDRLVT  339 (366)
T ss_pred             ccchhHHHHHHHcCCCchhHHhh
Confidence            99999999999999998776544

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.7e-59  Score=413.55  Aligned_cols=343  Identities=56%  Similarity=0.991  Sum_probs=327.4

Q ss_pred             cccceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCC
Q 018072            7 LILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDL   86 (361)
Q Consensus         7 ~~~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~   86 (361)
                      -+.++||++.+++++||.++|+..++|+.+||+||++++++|++|...|.|..+...+|.++|||++|+|+.+|++|+++
T Consensus         4 kvI~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV~~v   83 (375)
T KOG0022|consen    4 KVITCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGVTTV   83 (375)
T ss_pred             CceEEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCcccc
Confidence            36889999999999999999999999999999999999999999999999987778899999999999999999999999


Q ss_pred             CCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCC
Q 018072           87 EVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP  166 (361)
Q Consensus        87 ~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~  166 (361)
                      ++||+|+..+...|+.|.+|+++..|.|...+.....+...+||.+.+.-+|++++||.+..+|+||.+++...+++|++
T Consensus        84 k~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId~  163 (375)
T KOG0022|consen   84 KPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKIDP  163 (375)
T ss_pred             CCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecCC
Confidence            99999999999999999999999999999998887667777899999999999999999999999999999999999999


Q ss_pred             CCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEc
Q 018072          167 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  246 (361)
Q Consensus       167 ~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~  246 (361)
                      ..+++.++++.|.+.|+|.|.++.+.++||+++.|+|.|.+|++++|-|++.|+.+||++|.+++|.+.++++|+++.+|
T Consensus       164 ~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~iN  243 (375)
T KOG0022|consen  164 SAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFIN  243 (375)
T ss_pred             CCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceecC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCC
Q 018072          247 TSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY  326 (361)
Q Consensus       247 ~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~  326 (361)
                      ..+-...+.+.+++.+++|+|.-|||+|+.+++.+++.+...+||.-+.+|.......+.+.++.++.+.++.|+.+|.+
T Consensus       244 p~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~Gs~FGG~  323 (375)
T KOG0022|consen  244 PKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWKGSAFGGF  323 (375)
T ss_pred             hhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEEEEecccc
Confidence            88655569999999999999999999999999999999999988999999999988999999999999999999999999


Q ss_pred             CcCCcHHHHHHHHHcCCcccCCC
Q 018072          327 KPRTDLPSVVDMYMNKVIRFSSS  349 (361)
Q Consensus       327 ~~~~~~~~~~~~~~~~~l~~~~~  349 (361)
                      +++.+++.+++.+.++++.+++.
T Consensus       324 K~~~~iP~lV~~y~~~~l~ld~~  346 (375)
T KOG0022|consen  324 KSKSDIPKLVKDYMKKKLNLDEF  346 (375)
T ss_pred             cchhhhhHHHHHHHhCccchhhh
Confidence            99999999999999999866543

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.1e-55  Score=392.30  Aligned_cols=309  Identities=28%  Similarity=0.436  Sum_probs=274.1

Q ss_pred             cceeEEEeecCCCCeEEEEeecCCC-CCCeEEEEEeEEecCccchhccccCCCC---CCCCcccccceeEEEEEeCCCCC
Q 018072            9 LTCKAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQT---PLFPRIFGHEAAGVVESVGEGVS   84 (361)
Q Consensus         9 ~~m~a~~~~~~~~~~~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~---~~~p~~~G~e~~G~V~~~G~~v~   84 (361)
                      .+|+|+++.++++ +++++.|.|++ .|+||+|++.++|||++|++.|......   .+.|+++|||.+|+|.++|+.|+
T Consensus         3 ~~~~A~vl~g~~d-i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk   81 (354)
T KOG0024|consen    3 ADNLALVLRGKGD-IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVK   81 (354)
T ss_pred             cccceeEEEccCc-eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccccc
Confidence            5799999999998 99999999987 9999999999999999999999765433   35799999999999999999999


Q ss_pred             CCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEEC
Q 018072           85 DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI  164 (361)
Q Consensus        85 ~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~i  164 (361)
                      ++++||||++.|..+|..|++|++|++|+|++..+.   +..+.+|                  ++++|++.++++++||
T Consensus        82 ~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~---atpp~~G------------------~la~y~~~~~dfc~KL  140 (354)
T KOG0024|consen   82 HLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFC---ATPPVDG------------------TLAEYYVHPADFCYKL  140 (354)
T ss_pred             ccccCCeEEecCCCccccchhhhCcccccCCccccc---cCCCcCC------------------ceEEEEEechHheeeC
Confidence            999999999999999999999999999999999988   4333444                  9999999999999999


Q ss_pred             CCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEE
Q 018072          165 NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF  244 (361)
Q Consensus       165 P~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~v  244 (361)
                      ||++|++++|++. ++.++|||. +++++++|++|||+|+|++|+++...|+++|+.+|+.++..++|++.++++|++.+
T Consensus       141 Pd~vs~eeGAl~e-PLsV~~HAc-r~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~  218 (354)
T KOG0024|consen  141 PDNVSFEEGALIE-PLSVGVHAC-RRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVT  218 (354)
T ss_pred             CCCCchhhccccc-chhhhhhhh-hhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEE
Confidence            9999999999998 899999995 78999999999999999999999999999999999999999999999999999988


Q ss_pred             EcCCCCC--ccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEE
Q 018072          245 VNTSEHD--RPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKG  320 (361)
Q Consensus       245 v~~~~~~--~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g  320 (361)
                      .+....+  +++.+.++...++ .+|+.|||+|....++.++..++.+ |+++++|+-....+++  +.... |++++.|
T Consensus       219 ~~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~g-Gt~vlvg~g~~~~~fp--i~~v~~kE~~~~g  295 (354)
T KOG0024|consen  219 DPSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSG-GTVVLVGMGAEEIQFP--IIDVALKEVDLRG  295 (354)
T ss_pred             eeccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccC-CEEEEeccCCCccccC--hhhhhhheeeeee
Confidence            8766544  3355555555554 6999999999989999999999998 9999999866444444  44444 9999999


Q ss_pred             eeecCCCcCCcHHHHHHHHHcCCcccC
Q 018072          321 TFFGNYKPRTDLPSVVDMYMNKVIRFS  347 (361)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~l~~~  347 (361)
                      ++.+.   ..+++.+++++++|+++++
T Consensus       296 ~fry~---~~~y~~ai~li~sGki~~k  319 (354)
T KOG0024|consen  296 SFRYC---NGDYPTAIELVSSGKIDVK  319 (354)
T ss_pred             eeeec---cccHHHHHHHHHcCCcCch
Confidence            98655   3699999999999999765

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.7e-54  Score=383.70  Aligned_cols=328  Identities=27%  Similarity=0.443  Sum_probs=284.2

Q ss_pred             cccccceeEEEeecCCC--CeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCC
Q 018072            5 AGLILTCKAAVAWEAGK--PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEG   82 (361)
Q Consensus         5 ~~~~~~m~a~~~~~~~~--~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~   82 (361)
                      ...|.++++|.+..++.  ++++.+++.|+|+++||+||++++|||++|++.|.|.+...++|+++|||.+|+|+++|++
T Consensus         4 ~~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~VvkvGs~   83 (360)
T KOG0023|consen    4 MSIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKVGSN   83 (360)
T ss_pred             ccCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEECCC
Confidence            35799999999999988  4777999999999999999999999999999999999988999999999999999999999


Q ss_pred             CCCCCCCCEEe-ecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccce
Q 018072           83 VSDLEVGDHVL-PVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCV  161 (361)
Q Consensus        83 v~~~~~Gd~V~-~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~  161 (361)
                      |+.|++||||- -....+|.+|++|++++.++|++..+..+ |+. .||             ....|+|++|+++++.++
T Consensus        84 V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~-g~~-~DG-------------t~~~ggf~~~~~v~~~~a  148 (360)
T KOG0023|consen   84 VTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYN-GVY-HDG-------------TITQGGFQEYAVVDEVFA  148 (360)
T ss_pred             cccccccCeeeeeEEeccccCccccccCCcccCCceeEecc-ccc-cCC-------------CCccCccceeEEEeeeeE
Confidence            99999999994 55667999999999999999995333200 333 333             334578999999999999


Q ss_pred             EECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHHHHcC
Q 018072          162 AKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-KRFEEAKKFG  240 (361)
Q Consensus       162 ~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~-~~~~~~~~~G  240 (361)
                      ++||++++.++||.+.|+..|.|.++ ...++.||+++.|.|+|++|++++|+|+++|. +|+++++++ .|.+.++.||
T Consensus       149 ~kIP~~~pl~~aAPlLCaGITvYspL-k~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~~~LG  226 (360)
T KOG0023|consen  149 IKIPENLPLASAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAIKSLG  226 (360)
T ss_pred             EECCCCCChhhccchhhcceEEeehh-HHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHHHhcC
Confidence            99999999999999999999999985 77888999999999998899999999999999 999999988 5555567799


Q ss_pred             CCEEEcCC-CCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEE
Q 018072          241 VTDFVNTS-EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTL  318 (361)
Q Consensus       241 ~~~vv~~~-~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l  318 (361)
                      ++..++.. +.+  +.+.+...+++++|-+.+.  ....++.++++|+.+ |++|++|.+..  .+.++...++ +.+.|
T Consensus       227 Ad~fv~~~~d~d--~~~~~~~~~dg~~~~v~~~--a~~~~~~~~~~lk~~-Gt~V~vg~p~~--~~~~~~~~lil~~~~I  299 (360)
T KOG0023|consen  227 ADVFVDSTEDPD--IMKAIMKTTDGGIDTVSNL--AEHALEPLLGLLKVN-GTLVLVGLPEK--PLKLDTFPLILGRKSI  299 (360)
T ss_pred             cceeEEecCCHH--HHHHHHHhhcCcceeeeec--cccchHHHHHHhhcC-CEEEEEeCcCC--cccccchhhhcccEEE
Confidence            99988876 444  8888888888778887776  446889999999998 99999999885  4445455444 99999


Q ss_pred             EEeeecCCCcCCcHHHHHHHHHcCCc-----------------ccCCCCcceeEEEEe
Q 018072          319 KGTFFGNYKPRTDLPSVVDMYMNKVI-----------------RFSSSRPSFRCVIII  359 (361)
Q Consensus       319 ~g~~~~~~~~~~~~~~~~~~~~~~~l-----------------~~~~~~~~~~~vl~~  359 (361)
                      .||..|+.   .+.++++++..++.+                 ++++...+||+|++.
T Consensus       300 ~GS~vG~~---ket~E~Ldf~a~~~ik~~IE~v~~~~v~~a~erm~kgdV~yRfVvD~  354 (360)
T KOG0023|consen  300 KGSIVGSR---KETQEALDFVARGLIKSPIELVKLSEVNEAYERMEKGDVRYRFVVDV  354 (360)
T ss_pred             EeeccccH---HHHHHHHHHHHcCCCcCceEEEehhHHHHHHHHHHhcCeeEEEEEEc
Confidence            99999984   789999999999887                 688899999999875

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=100.00  E-value=8.5e-51  Score=389.03  Aligned_cols=332  Identities=39%  Similarity=0.694  Sum_probs=277.8

Q ss_pred             eeEEEeecCCC--------CeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCC
Q 018072           11 CKAAVAWEAGK--------PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEG   82 (361)
Q Consensus        11 m~a~~~~~~~~--------~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~   82 (361)
                      |||+++.++|.        .++++++|.|+|+++||+|||.++|||++|++++.|..+ ..+|.++|||++|+|+++|++
T Consensus         1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~   79 (371)
T cd08281           1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP-RPLPMALGHEAAGVVVEVGEG   79 (371)
T ss_pred             CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC-CCCCccCCccceeEEEEeCCC
Confidence            89999998763        389999999999999999999999999999999988653 356899999999999999999


Q ss_pred             CCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceE
Q 018072           83 VSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVA  162 (361)
Q Consensus        83 v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~  162 (361)
                      ++++++||+|++.+..+|+.|+.|++|+++.|.+.......|.. .+|...+..++..+.+..+.|+|+||+++|++.++
T Consensus        80 v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~  158 (371)
T cd08281          80 VTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTL-LSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVV  158 (371)
T ss_pred             CCcCCCCCEEEEccCCCCCCCccccCCCcccccCcccccccccc-ccCcccccccCcccccccCcccceeeEEecccceE
Confidence            99999999999988889999999999999999876443222221 11211121222111112234689999999999999


Q ss_pred             ECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC
Q 018072          163 KINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT  242 (361)
Q Consensus       163 ~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~  242 (361)
                      ++|+++++++|+.+++++.|||+++.+.+++++|++|||.|+|++|++++|+|+..|+++|++++++++|+++++++|++
T Consensus       159 ~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~  238 (371)
T cd08281         159 KIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGAT  238 (371)
T ss_pred             ECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCc
Confidence            99999999999999999999999987888999999999999999999999999999996799999999999999999999


Q ss_pred             EEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEe
Q 018072          243 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGT  321 (361)
Q Consensus       243 ~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~  321 (361)
                      +++++.+.+  +.+.++.++++++|++||++|.+..+..++++++++ |+++.+|.......+.++...++ +++++.|+
T Consensus       239 ~~i~~~~~~--~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~  315 (371)
T cd08281         239 ATVNAGDPN--AVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRG-GTTVTAGLPDPEARLSVPALSLVAEERTLKGS  315 (371)
T ss_pred             eEeCCCchh--HHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEccCCCCceeeecHHHHhhcCCEEEEE
Confidence            999876654  777888877668999999999888999999999998 99999997653334555555444 99999999


Q ss_pred             eecCCCcCCcHHHHHHHHHcCCcccC
Q 018072          322 FFGNYKPRTDLPSVVDMYMNKVIRFS  347 (361)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~l~~~  347 (361)
                      +.+++...++++++++++++++++++
T Consensus       316 ~~~~~~~~~~~~~~~~l~~~g~i~~~  341 (371)
T cd08281         316 YMGSCVPRRDIPRYLALYLSGRLPVD  341 (371)
T ss_pred             ecCCCChHHHHHHHHHHHHcCCCCch
Confidence            88765545789999999999999654

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=100.00  E-value=1.5e-50  Score=386.73  Aligned_cols=335  Identities=50%  Similarity=0.924  Sum_probs=277.5

Q ss_pred             eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   90 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd   90 (361)
                      |||+++..+++.++++++|.|+|.++||+|||.++|+|++|++++.|..+...+|.++|||++|+|+++|++++.|++||
T Consensus         2 ~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd   81 (368)
T TIGR02818         2 SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKVGD   81 (368)
T ss_pred             ceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCCCCC
Confidence            89999999887799999999999999999999999999999999988765556799999999999999999999999999


Q ss_pred             EEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCCh
Q 018072           91 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL  170 (361)
Q Consensus        91 ~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~  170 (361)
                      +|++.+..+|+.|.+|+.++.+.|.+......+|.. .+|..++.++|.++.+..+.|+|+||+++|.+.++++|+++++
T Consensus        82 rV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~  160 (368)
T TIGR02818        82 HVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLM-PDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPL  160 (368)
T ss_pred             EEEEcCCCCCCCChhhhCCCcccccCcccccccccc-cCCccccccCCCcccccccCccceeeEEechhheEECCCCCCH
Confidence            999999999999999999999999875432222322 2222223333433333334579999999999999999999999


Q ss_pred             hhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCC
Q 018072          171 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH  250 (361)
Q Consensus       171 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~  250 (361)
                      ++++.+++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|++.++++.+.
T Consensus       161 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~  240 (368)
T TIGR02818       161 EEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPNDY  240 (368)
T ss_pred             HHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEccccc
Confidence            99999999999999998788899999999999999999999999999998779999999999999999999999987653


Q ss_pred             CccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCCCcCC
Q 018072          251 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRT  330 (361)
Q Consensus       251 ~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~  330 (361)
                      +.++.+.+++++++++|++||++|++..+..+++++++++|+++.+|.......+.+....++++..+.|++.+....+.
T Consensus       241 ~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  320 (368)
T TIGR02818       241 DKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVTGRVWRGSAFGGVKGRT  320 (368)
T ss_pred             chhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhccceEEEeeccCCCcHH
Confidence            33366777777766899999999988889999999987229999999865333344444444445567888765544456


Q ss_pred             cHHHHHHHHHcCCccc
Q 018072          331 DLPSVVDMYMNKVIRF  346 (361)
Q Consensus       331 ~~~~~~~~~~~~~l~~  346 (361)
                      ++++++++++++++++
T Consensus       321 ~~~~~~~~~~~g~i~~  336 (368)
T TIGR02818       321 ELPGIVEQYMKGEIAL  336 (368)
T ss_pred             HHHHHHHHHHCCCCCc
Confidence            8999999999998854

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=100.00  E-value=1.9e-50  Score=386.44  Aligned_cols=337  Identities=77%  Similarity=1.276  Sum_probs=281.9

Q ss_pred             ceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018072           10 TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (361)
Q Consensus        10 ~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~G   89 (361)
                      +|||+++.+++++++++++|.|+|+++||+|||.++|||++|++.+.|..+...+|.++|||++|+|+++|+++++|++|
T Consensus         2 ~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   81 (369)
T cd08301           2 TCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLKPG   81 (369)
T ss_pred             ccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCccccC
Confidence            69999999988889999999999999999999999999999999998876656779999999999999999999999999


Q ss_pred             CEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCC
Q 018072           90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP  169 (361)
Q Consensus        90 d~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~  169 (361)
                      |+|++.+..+|++|+.|..++++.|.+.......|....++...+...|....++...|+|+||++++.+.++++|++++
T Consensus        82 drV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~  161 (369)
T cd08301          82 DHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEAP  161 (369)
T ss_pred             CEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCCCC
Confidence            99999999999999999999999999865432222211111111111222222222346899999999999999999999


Q ss_pred             hhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCC
Q 018072          170 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE  249 (361)
Q Consensus       170 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~  249 (361)
                      +++++++++++.|+|+++.+..++++|++|||+|+|++|++++|+|+++|+.+|++++++++++++++++|++.++++..
T Consensus       162 ~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~  241 (369)
T cd08301         162 LDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPKD  241 (369)
T ss_pred             HHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcccc
Confidence            99999999999999998888889999999999999999999999999999878999999999999999999999988765


Q ss_pred             CCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcC-CCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCCCc
Q 018072          250 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHD-GWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP  328 (361)
Q Consensus       250 ~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~-~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~  328 (361)
                      .+..+.+.+++++++++|++||++|++..+..+++++++ + |+++++|.......+++.+..+++++++.|++.+++..
T Consensus       242 ~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~  320 (369)
T cd08301         242 HDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGW-GVTVLLGVPHKDAVFSTHPMNLLNGRTLKGTLFGGYKP  320 (369)
T ss_pred             cchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCC-CEEEEECcCCCCcccccCHHHHhcCCeEEEEecCCCCh
Confidence            322366777777766899999999987888999999998 5 99999998764344555554455899999998877765


Q ss_pred             CCcHHHHHHHHHcCCcccC
Q 018072          329 RTDLPSVVDMYMNKVIRFS  347 (361)
Q Consensus       329 ~~~~~~~~~~~~~~~l~~~  347 (361)
                      +.+++++++++.++++++.
T Consensus       321 ~~~~~~~~~~~~~g~~~~~  339 (369)
T cd08301         321 KTDLPNLVEKYMKKELELE  339 (369)
T ss_pred             HHHHHHHHHHHHcCCCCcH
Confidence            6789999999999988653

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PLN02740 Alcohol dehydrogenase-like

Probab=100.00  E-value=2e-50  Score=387.68  Aligned_cols=340  Identities=53%  Similarity=1.028  Sum_probs=280.1

Q ss_pred             cccceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCC-CCCCCcccccceeEEEEEeCCCCCC
Q 018072            7 LILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSD   85 (361)
Q Consensus         7 ~~~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~v~~   85 (361)
                      -|.+|||+++.++++++.++++|.|.|+++||+|||.++|||++|++.+.|..+ ...+|.++|||++|+|+++|++++.
T Consensus         7 ~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~   86 (381)
T PLN02740          7 KVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVED   86 (381)
T ss_pred             cceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCCCCc
Confidence            578999999999987789999999999999999999999999999999888653 2357899999999999999999999


Q ss_pred             CCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccC--CCccccccCcccceeeEEEeccceEE
Q 018072           86 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSIN--GEPVNHFLGTSTFSEYTVVHSGCVAK  163 (361)
Q Consensus        86 ~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~--g~~~~~~~~~G~~ae~v~v~~~~~~~  163 (361)
                      |++||+|++.+..+|+.|..|++++++.|.+....+-.+....+|...+...  +..+.++...|+|+||+++|.+.+++
T Consensus        87 ~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~  166 (381)
T PLN02740         87 LKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVK  166 (381)
T ss_pred             CCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeEE
Confidence            9999999999999999999999999999998654311000000111111000  00111122246999999999999999


Q ss_pred             CCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCE
Q 018072          164 INPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD  243 (361)
Q Consensus       164 iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~  243 (361)
                      +|+++++++++.+++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|++.++++|++.
T Consensus       167 iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~  246 (381)
T PLN02740        167 IDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITD  246 (381)
T ss_pred             CCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCCcE
Confidence            99999999999999999999998778889999999999999999999999999999867999999999999999999999


Q ss_pred             EEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeee
Q 018072          244 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFF  323 (361)
Q Consensus       244 vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~  323 (361)
                      ++++.+.+.++.+.++.++++++|++||++|++..+..+++++++++|+++++|.......+++.+..+++++++.|++.
T Consensus       247 ~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~  326 (381)
T PLN02740        247 FINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRSITGSVF  326 (381)
T ss_pred             EEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhcCCeEEEEec
Confidence            99876543347777887776689999999999889999999998822999999987644445555554558999999988


Q ss_pred             cCCCcCCcHHHHHHHHHcCCccc
Q 018072          324 GNYKPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~l~~  346 (361)
                      +++....+++++++++.++++++
T Consensus       327 ~~~~~~~~~~~~~~~~~~g~i~~  349 (381)
T PLN02740        327 GDFKGKSQLPNLAKQCMQGVVNL  349 (381)
T ss_pred             CCCCcHHHHHHHHHHHHcCCCCh
Confidence            77655567899999999998865

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=100.00  E-value=1.1e-49  Score=380.91  Aligned_cols=337  Identities=57%  Similarity=0.991  Sum_probs=279.4

Q ss_pred             ceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018072           10 TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (361)
Q Consensus        10 ~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~G   89 (361)
                      +|||+++..++++++++++|.|.|+++||+|||+++|+|++|++.+.|..+...+|.++|||++|+|+++|+++++|++|
T Consensus         2 ~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vG   81 (368)
T cd08300           2 TCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKPG   81 (368)
T ss_pred             cceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCCCC
Confidence            69999999888779999999999999999999999999999999988876555689999999999999999999999999


Q ss_pred             CEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCC
Q 018072           90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP  169 (361)
Q Consensus        90 d~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~  169 (361)
                      |+|++.+..+|+.|.+|++++++.|.+.......|.. .+|-..+..+|.+..+..+.|+|+||+.++.+.++++|++++
T Consensus        82 drV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~  160 (368)
T cd08300          82 DHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLM-PDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAP  160 (368)
T ss_pred             CEEEEcCCCCCCCChhhcCCCcCcCCCcccccccccc-CCCccccccCCcccccccccccceeEEEEchhceEeCCCCCC
Confidence            9999999999999999999999999875322111221 112111222233333333457999999999999999999999


Q ss_pred             hhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCC
Q 018072          170 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE  249 (361)
Q Consensus       170 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~  249 (361)
                      +++++.+++++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|++.++++|+++++++.+
T Consensus       161 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~~  240 (368)
T cd08300         161 LDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKD  240 (368)
T ss_pred             hhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcccc
Confidence            99999999999999999878889999999999999999999999999999877999999999999999999999998766


Q ss_pred             CCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCCCcC
Q 018072          250 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPR  329 (361)
Q Consensus       250 ~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~  329 (361)
                      .++++.+.+++++++++|+|||++|++..+..+++++++++|+++.+|.......+.+.+..+.++.++.|+..+.+..+
T Consensus       241 ~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  320 (368)
T cd08300         241 HDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRVWKGTAFGGWKSR  320 (368)
T ss_pred             cchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHhhcCeEEEEEecccCcH
Confidence            43347778888777789999999998788999999997733999999976433334444444445567888877776667


Q ss_pred             CcHHHHHHHHHcCCcccC
Q 018072          330 TDLPSVVDMYMNKVIRFS  347 (361)
Q Consensus       330 ~~~~~~~~~~~~~~l~~~  347 (361)
                      +++++++++++++++++.
T Consensus       321 ~~~~~~~~~~~~g~l~~~  338 (368)
T cd08300         321 SQVPKLVEDYMKGKIKVD  338 (368)
T ss_pred             HHHHHHHHHHHcCCCChh
Confidence            889999999999998653

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=100.00  E-value=4.2e-49  Score=375.60  Aligned_cols=325  Identities=37%  Similarity=0.627  Sum_probs=273.4

Q ss_pred             ceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018072           10 TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (361)
Q Consensus        10 ~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~G   89 (361)
                      ||||+++.+++++++++++|.|+|+++||+|||.++|+|++|++.+.|..+ ..+|.++|||++|+|+++|+++++|++|
T Consensus         1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~G   79 (358)
T TIGR03451         1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN-DEFPFLLGHEAAGVVEAVGEGVTDVAPG   79 (358)
T ss_pred             CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc-ccCCcccccceEEEEEEeCCCCcccCCC
Confidence            699999999998899999999999999999999999999999999887543 3578999999999999999999999999


Q ss_pred             CEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCC
Q 018072           90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP  169 (361)
Q Consensus        90 d~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~  169 (361)
                      |+|++.+..+|+.|+.|..++.+.|.+.... .......+|        .......+.|+|+||+.+|++.++++|++++
T Consensus        80 drV~~~~~~~cg~c~~c~~g~~~~c~~~~~~-~~~~~~~~g--------~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~  150 (358)
T TIGR03451        80 DYVVLNWRAVCGQCRACKRGRPWYCFDTHNA-TQKMTLTDG--------TELSPALGIGAFAEKTLVHAGQCTKVDPAAD  150 (358)
T ss_pred             CEEEEccCCCCCCChHHhCcCcccCcCcccc-ccccccccC--------cccccccccccccceEEEehhheEECCCCCC
Confidence            9999999999999999999999999753211 000000001        0000001246899999999999999999999


Q ss_pred             hhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCC
Q 018072          170 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE  249 (361)
Q Consensus       170 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~  249 (361)
                      +++++.+++++.++|+++.+.+.+++|++|||+|+|++|++++|+|+++|+.+|++++++++|+++++++|+++++++..
T Consensus       151 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~  230 (358)
T TIGR03451       151 PAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSG  230 (358)
T ss_pred             hhHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCC
Confidence            99999999999999988777888999999999999999999999999999966999999999999999999999998866


Q ss_pred             CCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeecCCC
Q 018072          250 HDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYK  327 (361)
Q Consensus       250 ~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~~~~  327 (361)
                      .+  +.+.+..++++ ++|++||++|+++.+..++++++++ |+++.+|.......+.+++..++ +++++.+++.+...
T Consensus       231 ~~--~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  307 (358)
T TIGR03451       231 TD--PVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLA-GTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCL  307 (358)
T ss_pred             cC--HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCC
Confidence            54  77788888876 8999999999888999999999998 99999998653334455554444 89999998765444


Q ss_pred             cCCcHHHHHHHHHcCCcccC
Q 018072          328 PRTDLPSVVDMYMNKVIRFS  347 (361)
Q Consensus       328 ~~~~~~~~~~~~~~~~l~~~  347 (361)
                      ..++++++++++++|++++.
T Consensus       308 ~~~~~~~~~~l~~~g~l~~~  327 (358)
T TIGR03451       308 PERDFPMLVDLYLQGRLPLD  327 (358)
T ss_pred             cHHHHHHHHHHHHcCCCCch
Confidence            46789999999999998653

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PLN02827 Alcohol dehydrogenase-like

Probab=100.00  E-value=1.2e-48  Score=374.68  Aligned_cols=334  Identities=57%  Similarity=1.037  Sum_probs=272.2

Q ss_pred             cceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 018072            9 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV   88 (361)
Q Consensus         9 ~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~   88 (361)
                      ..|||+++.++++.++++++|.|.|+++||+|||.++|+|++|++.+.+..   .+|.++|||++|+|+++|++++.|++
T Consensus        11 ~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~---~~p~i~GhE~~G~V~~vG~~v~~~~~   87 (378)
T PLN02827         11 ITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA---LFPRIFGHEASGIVESIGEGVTEFEK   87 (378)
T ss_pred             ceeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC---CCCeeecccceEEEEEcCCCCcccCC
Confidence            469999999988669999999999999999999999999999999887632   46889999999999999999999999


Q ss_pred             CCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCC
Q 018072           89 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA  168 (361)
Q Consensus        89 Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~  168 (361)
                      ||+|++.+..+|++|++|+++++++|.+.... ..|....+....|...|..+.++...|+|+||+.+|++.++++|+++
T Consensus        88 GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~l  166 (378)
T PLN02827         88 GDHVLTVFTGECGSCRHCISGKSNMCQVLGLE-RKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLA  166 (378)
T ss_pred             CCEEEEecCCCCCCChhhhCcCcccccCcccc-ccccccCCCcccccccCcccccccccccceeeEEechhheEECCCCC
Confidence            99999999999999999999999999874321 01111011111111222221112234699999999999999999999


Q ss_pred             ChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCC
Q 018072          169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  248 (361)
Q Consensus       169 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~  248 (361)
                      ++++++.+++++.++|+++++.+++++|++|||+|+|++|++++|+|+++|+..|++++++++|+++++++|+++++++.
T Consensus       167 ~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~i~~~  246 (378)
T PLN02827        167 PLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINPN  246 (378)
T ss_pred             CHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEccc
Confidence            99999999888899998877778899999999999999999999999999986799999999999999999999999876


Q ss_pred             CCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCCCc
Q 018072          249 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP  328 (361)
Q Consensus       249 ~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~  328 (361)
                      +.+.++.+.+++++.+++|++||++|.+..+..+++.+++++|+++.+|.......+......+++++++.|++.+.+..
T Consensus       247 ~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~  326 (378)
T PLN02827        247 DLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGSLFGGWKP  326 (378)
T ss_pred             ccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEeeecCCCch
Confidence            53334777788777668999999999977889999999982299999998653333322223345999999998776655


Q ss_pred             CCcHHHHHHHHHcCCccc
Q 018072          329 RTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       329 ~~~~~~~~~~~~~~~l~~  346 (361)
                      ..++++++++++++++++
T Consensus       327 ~~~~~~~~~~~~~g~i~~  344 (378)
T PLN02827        327 KSDLPSLVDKYMNKEIMI  344 (378)
T ss_pred             hhhHHHHHHHHHcCCCCh
Confidence            568999999999999865

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=100.00  E-value=2.3e-48  Score=367.80  Aligned_cols=313  Identities=30%  Similarity=0.394  Sum_probs=254.7

Q ss_pred             eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCc-ccccceeEEEEEeCCCCCCCCCC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPR-IFGHEAAGVVESVGEGVSDLEVG   89 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~-~~G~e~~G~V~~~G~~v~~~~~G   89 (361)
                      |++++++.++...++++.+.|.+.++||+|||.++|||+||++++.+..+....|. ++|||++|+|+++| .++.+++|
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~G   79 (350)
T COG1063           1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVG   79 (350)
T ss_pred             CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCCCC
Confidence            67888888776344778877778999999999999999999999999776666666 99999999999999 77789999


Q ss_pred             CEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEE-CCCCC
Q 018072           90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAK-INPLA  168 (361)
Q Consensus        90 d~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~-iP~~~  168 (361)
                      |||++.|..+|+.|++|+.|.+++|.+..+.......                 ..-.|+|+||+.+|.++.++ +|+++
T Consensus        80 drVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~-----------------~~~~G~~aEyv~vp~~~~~~~~pd~~  142 (350)
T COG1063          80 DRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLG-----------------GGIDGGFAEYVRVPADFNLAKLPDGI  142 (350)
T ss_pred             CEEEECCCcCCCCChhHhCcCcccCCCcccccccccc-----------------CCCCCceEEEEEeccccCeecCCCCC
Confidence            9999999999999999999999999976544111111                 00124999999999755555 58888


Q ss_pred             ChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCEEEcC
Q 018072          169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNT  247 (361)
Q Consensus       169 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~vv~~  247 (361)
                       ..+++++..++.++|++.......+++++|+|+|+|++|++++++|+..|+.+|+++|.+++|++++++ .|++.+++.
T Consensus       143 -~~~~aal~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~  221 (350)
T COG1063         143 -DEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNP  221 (350)
T ss_pred             -ChhhhhhcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecC
Confidence             455555555999998875455556666699999999999999999999999999999999999999999 566666555


Q ss_pred             CCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeecC
Q 018072          248 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGN  325 (361)
Q Consensus       248 ~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~~  325 (361)
                      ...+  ....+.+++++ ++|++|||+|.+.++.++++.++++ |+++++|....... .++...++ |++++.|++.. 
T Consensus       222 ~~~~--~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~g-G~v~~vGv~~~~~~-~~~~~~~~~kel~l~gs~~~-  296 (350)
T COG1063         222 SEDD--AGAEILELTGGRGADVVIEAVGSPPALDQALEALRPG-GTVVVVGVYGGEDI-PLPAGLVVSKELTLRGSLRP-  296 (350)
T ss_pred             cccc--HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCC-CEEEEEeccCCccC-ccCHHHHHhcccEEEeccCC-
Confidence            4433  66778888888 9999999999999999999999998 99999999875543 33343344 99999999532 


Q ss_pred             CCcCCcHHHHHHHHHcCCcccCC
Q 018072          326 YKPRTDLPSVVDMYMNKVIRFSS  348 (361)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~l~~~~  348 (361)
                       ..+.+++.+++++.+|++++.+
T Consensus       297 -~~~~~~~~~~~ll~~g~i~~~~  318 (350)
T COG1063         297 -SGREDFERALDLLASGKIDPEK  318 (350)
T ss_pred             -CCcccHHHHHHHHHcCCCChhH
Confidence             2257899999999999997753

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=100.00  E-value=9.1e-48  Score=367.30  Aligned_cols=333  Identities=58%  Similarity=0.988  Sum_probs=276.3

Q ss_pred             cceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 018072            9 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV   88 (361)
Q Consensus         9 ~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~   88 (361)
                      ++|||+++.+.+++++++++|.|.|.++||+|||.++|+|++|++.+.|..+ ..+|.++|||++|+|+++|++++++++
T Consensus         1 ~~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~   79 (365)
T cd08277           1 IKCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-TLFPVILGHEGAGIVESVGEGVTNLKP   79 (365)
T ss_pred             CccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC-CCCCeecccceeEEEEeeCCCCccCCC
Confidence            3589999998887799999999999999999999999999999999887554 567899999999999999999999999


Q ss_pred             CCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCC
Q 018072           89 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA  168 (361)
Q Consensus        89 Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~  168 (361)
                      ||+|++.+..+|++|..|..+.+++|.+..+... |.. .++...+...|.....+.+.|+|+||+.++.+.++++|+++
T Consensus        80 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~-g~~-~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l  157 (365)
T cd08277          80 GDKVIPLFIGQCGECSNCRSGKTNLCQKYRANES-GLM-PDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAA  157 (365)
T ss_pred             CCEEEECCCCCCCCCchhcCcCcccCcCcccccc-ccc-cCCccccccCCcccccccccccceeeEEEchhheEECCCCC
Confidence            9999999999999999999999999998664411 221 11111111122222222235789999999999999999999


Q ss_pred             ChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCC
Q 018072          169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  248 (361)
Q Consensus       169 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~  248 (361)
                      ++++++.+++++.|||+++.+.+.+++|++|+|+|+|++|++++|+|+++|+.+|++++++++|++.++++|++++++..
T Consensus       158 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~  237 (365)
T cd08277         158 PLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPK  237 (365)
T ss_pred             CHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEeccc
Confidence            99999999999999999877888999999999999999999999999999987799999999999999999999998876


Q ss_pred             CCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcC-CCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCCC
Q 018072          249 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHD-GWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK  327 (361)
Q Consensus       249 ~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~-~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~  327 (361)
                      ..+..+.+.++.++++++|+|||++|++..+..+++++++ + |+++.+|.... ...++++..+++++++.|++.+.+.
T Consensus       238 ~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~  315 (365)
T cd08277         238 DSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGW-GVSVVVGVPPG-AELSIRPFQLILGRTWKGSFFGGFK  315 (365)
T ss_pred             cccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCC-CEEEEEcCCCc-cccccCHhHHhhCCEEEeeecCCCC
Confidence            5433356677777767899999999987888999999977 5 99999997652 2334444444468999999887765


Q ss_pred             cCCcHHHHHHHHHcCCccc
Q 018072          328 PRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       328 ~~~~~~~~~~~~~~~~l~~  346 (361)
                      .+.++++++++++++++++
T Consensus       316 ~~~~~~~~~~~~~~~~~~~  334 (365)
T cd08277         316 SRSDVPKLVSKYMNKKFDL  334 (365)
T ss_pred             hHHHHHHHHHHHHCCCcCh
Confidence            5668999999999887754

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=100.00  E-value=2.4e-47  Score=360.85  Aligned_cols=305  Identities=30%  Similarity=0.455  Sum_probs=261.4

Q ss_pred             eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCCCCCCC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~~~~~G   89 (361)
                      |||+++.+++. ++++++|.|+|+++||+|||.++++|++|++.+.+.... ..+|.++|||++|+|+++|++++.+++|
T Consensus         1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   79 (339)
T cd08239           1 MRGAVFPGDRT-VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFRVG   79 (339)
T ss_pred             CeEEEEecCCc-eEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCCCC
Confidence            79999998876 999999999999999999999999999999987665332 2358899999999999999999999999


Q ss_pred             CEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCC
Q 018072           90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP  169 (361)
Q Consensus        90 d~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~  169 (361)
                      |+|++.+..+|+.|+.|+.|+++.|.+...  .+|..                   ..|+|+||+++|.+.++++|++++
T Consensus        80 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~--~~g~~-------------------~~G~~ae~~~v~~~~~~~~P~~~~  138 (339)
T cd08239          80 DRVMVYHYVGCGACRNCRRGWMQLCTSKRA--AYGWN-------------------RDGGHAEYMLVPEKTLIPLPDDLS  138 (339)
T ss_pred             CEEEECCCCCCCCChhhhCcCcccCcCccc--ccccC-------------------CCCcceeEEEechHHeEECCCCCC
Confidence            999999999999999999999999986543  11211                   135899999999999999999999


Q ss_pred             hhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCC
Q 018072          170 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE  249 (361)
Q Consensus       170 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~  249 (361)
                      +++++.+++++.|||+++ +...+++|++|||+|+|++|++++|+|+.+|+++|++++++++|+++++++|++.++++.+
T Consensus       139 ~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~  217 (339)
T cd08239         139 FADGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQ  217 (339)
T ss_pred             HHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCc
Confidence            999999999999999996 5678899999999999999999999999999955999999999999999999999998765


Q ss_pred             CCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCCCc
Q 018072          250 HDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP  328 (361)
Q Consensus       250 ~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~  328 (361)
                      .+   .+.+.+++++ ++|++||++|++..+..++++++++ |+++.+|.... ..++.....+++++++.|++.++   
T Consensus       218 ~~---~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~---  289 (339)
T cd08239         218 DD---VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPW-GRLVLVGEGGE-LTIEVSNDLIRKQRTLIGSWYFS---  289 (339)
T ss_pred             ch---HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcCCCC-cccCcHHHHHhCCCEEEEEecCC---
Confidence            43   4556666666 8999999999977788999999998 99999997653 23332223344999999988654   


Q ss_pred             CCcHHHHHHHHHcCCccc
Q 018072          329 RTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       329 ~~~~~~~~~~~~~~~l~~  346 (361)
                      .+++++++++++++++++
T Consensus       290 ~~~~~~~~~~~~~g~i~~  307 (339)
T cd08239         290 VPDMEECAEFLARHKLEV  307 (339)
T ss_pred             HHHHHHHHHHHHcCCCCh
Confidence            368999999999998854

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=100.00  E-value=9.1e-47  Score=357.48  Aligned_cols=304  Identities=23%  Similarity=0.340  Sum_probs=251.5

Q ss_pred             cceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccc-cCCC--CCCCCcccccceeEEEEEeCCCCCC
Q 018072            9 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE-SKGQ--TPLFPRIFGHEAAGVVESVGEGVSD   85 (361)
Q Consensus         9 ~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~-g~~~--~~~~p~~~G~e~~G~V~~~G~~v~~   85 (361)
                      ..|||+++.++++ ++++++|.| +.++||||||.++|||++|++++. |...  ..++|.++|||++|+|+++  ++++
T Consensus         3 ~~~~~~~~~~~~~-~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~   78 (343)
T PRK09880          3 VKTQSCVVAGKKD-VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSG   78 (343)
T ss_pred             ccceEEEEecCCc-eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCcc
Confidence            6789999999988 999999998 689999999999999999999875 3322  2357999999999999999  6789


Q ss_pred             CCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECC
Q 018072           86 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN  165 (361)
Q Consensus        86 ~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP  165 (361)
                      |++||+|++.+..+|+.|++|+.++++.|++..+.   |....+              ....|+|+||++++++.++++|
T Consensus        79 ~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~---g~~~~~--------------~~~~G~~aey~~v~~~~~~~~P  141 (343)
T PRK09880         79 LKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFF---GSAMYF--------------PHVDGGFTRYKVVDTAQCIPYP  141 (343)
T ss_pred             CCCCCEEEECCCCCCcCChhhcCCChhhCCCccee---eccccc--------------CCCCCceeeeEEechHHeEECC
Confidence            99999999999999999999999999999986543   221000              0113599999999999999999


Q ss_pred             CCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEE
Q 018072          166 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV  245 (361)
Q Consensus       166 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv  245 (361)
                      +++++++++.. .++.+||+++ ......+|++|+|+|+|++|++++|+|+++|+++|++++++++|+++++++|+++++
T Consensus       142 ~~l~~~~aa~~-~~~~~a~~al-~~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi  219 (343)
T PRK09880        142 EKADEKVMAFA-EPLAVAIHAA-HQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLV  219 (343)
T ss_pred             CCCCHHHHHhh-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEe
Confidence            99998776644 4788999986 445666899999999999999999999999997899999999999999999999999


Q ss_pred             cCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh-ccccEEEEeeec
Q 018072          246 NTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFG  324 (361)
Q Consensus       246 ~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~  324 (361)
                      ++.+.+  +.+...  ..+++|++||++|++..+..++++++++ |+++.+|.......  ++...+ .|++++.|++..
T Consensus       220 ~~~~~~--~~~~~~--~~g~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~--~~~~~~~~k~~~i~g~~~~  292 (343)
T PRK09880        220 NPQNDD--LDHYKA--EKGYFDVSFEVSGHPSSINTCLEVTRAK-GVMVQVGMGGAPPE--FPMMTLIVKEISLKGSFRF  292 (343)
T ss_pred             cCCccc--HHHHhc--cCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCCc--cCHHHHHhCCcEEEEEeec
Confidence            876644  433222  1236999999999988899999999998 99999997553333  334434 499999998743


Q ss_pred             CCCcCCcHHHHHHHHHcCCccc
Q 018072          325 NYKPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~l~~  346 (361)
                          .+++++++++++++++++
T Consensus       293 ----~~~~~~~~~l~~~g~i~~  310 (343)
T PRK09880        293 ----TEEFNTAVSWLANGVINP  310 (343)
T ss_pred             ----cccHHHHHHHHHcCCCCc
Confidence                368999999999999865

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=8.3e-47  Score=352.88  Aligned_cols=285  Identities=28%  Similarity=0.397  Sum_probs=248.1

Q ss_pred             eeEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccC-CCCCCCCcccccceeEEEEEeCCCCCCCC
Q 018072           11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQTPLFPRIFGHEAAGVVESVGEGVSDLE   87 (361)
Q Consensus        11 m~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~-~~~~~~p~~~G~e~~G~V~~~G~~v~~~~   87 (361)
                      |||+++.+.+.+  ++++++|.|+|++|||||||.++|||+.|.+.+.|. .+..++|+++|.|++|+|+++|++|+.|+
T Consensus         1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~   80 (326)
T COG0604           1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK   80 (326)
T ss_pred             CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence            789999998876  889999999999999999999999999999999986 33456899999999999999999999999


Q ss_pred             CCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072           88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  167 (361)
Q Consensus        88 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~  167 (361)
                      +||+|+... ..|                                             ..|+||||+.+|++.++++|++
T Consensus        81 ~GdrV~~~~-~~~---------------------------------------------~~G~~AEy~~v~a~~~~~~P~~  114 (326)
T COG0604          81 VGDRVAALG-GVG---------------------------------------------RDGGYAEYVVVPADWLVPLPDG  114 (326)
T ss_pred             CCCEEEEcc-CCC---------------------------------------------CCCcceeEEEecHHHceeCCCC
Confidence            999998652 000                                             1259999999999999999999


Q ss_pred             CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEc
Q 018072          168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  246 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~  246 (361)
                      +|+++||++++++.|||+++.+..++++|++|||+|+ |++|.+++|+|+++|+ .++++.+++++.++++++|++++++
T Consensus       115 ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~  193 (326)
T COG0604         115 LSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVIN  193 (326)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEc
Confidence            9999999999999999999999899999999999986 9999999999999998 6777777788888999999999999


Q ss_pred             CCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeec
Q 018072          247 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFG  324 (361)
Q Consensus       247 ~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~  324 (361)
                      +.+.+  +.+.+++++++ ++|+|+|++|+ +.+..+++.|+++ |+++.+|...+.....++...++ +.+++.|.+..
T Consensus       194 y~~~~--~~~~v~~~t~g~gvDvv~D~vG~-~~~~~~l~~l~~~-G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~  269 (326)
T COG0604         194 YREED--FVEQVRELTGGKGVDVVLDTVGG-DTFAASLAALAPG-GRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLG  269 (326)
T ss_pred             CCccc--HHHHHHHHcCCCCceEEEECCCH-HHHHHHHHHhccC-CEEEEEecCCCCCccccCHHHHhhccEEEEEecce
Confidence            98887  99999999998 99999999999 7888999999998 99999998764334444444444 88888888866


Q ss_pred             CC---CcCCcHHHHHHHHHcCCccc
Q 018072          325 NY---KPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       325 ~~---~~~~~~~~~~~~~~~~~l~~  346 (361)
                      ..   ...+.++++.+++++|++++
T Consensus       270 ~~~~~~~~~~~~~l~~~~~~g~l~~  294 (326)
T COG0604         270 SRDPEALAEALAELFDLLASGKLKP  294 (326)
T ss_pred             ecchHHHHHHHHHHHHHHHcCCCcc
Confidence            54   12345677899999999864

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=100.00  E-value=3.3e-46  Score=358.72  Aligned_cols=314  Identities=23%  Similarity=0.312  Sum_probs=247.1

Q ss_pred             ceeEEEeecCCCCeEEEEeecCCCC-------CCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCC
Q 018072           10 TCKAAVAWEAGKPLIIQDVEVAPPQ-------AMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEG   82 (361)
Q Consensus        10 ~m~a~~~~~~~~~~~~~~~~~p~~~-------~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~   82 (361)
                      .|||+++.++++ ++++++|.|+|+       ++||||||.++|||++|++++.|..+ ..+|.++|||++|+|+++|++
T Consensus         2 ~mka~v~~~~~~-~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~   79 (393)
T TIGR02819         2 GNRGVVYLGPGK-VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT-APTGLVLGHEITGEVIEKGRD   79 (393)
T ss_pred             CceEEEEecCCc-eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC-CCCCccccceeEEEEEEEcCc
Confidence            499999999987 999999999874       68999999999999999999987543 356899999999999999999


Q ss_pred             CCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCC---cccccccCCCcccccCCCccccccCcccceeeEEEecc
Q 018072           83 VSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINP---VRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG  159 (361)
Q Consensus        83 v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~---~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~  159 (361)
                      |++|++||||++.+..+|+.|++|++|++++|.+.....   .+|....               ....|+|+||+++|..
T Consensus        80 V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~---------------~~~~G~~aey~~v~~~  144 (393)
T TIGR02819        80 VEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDM---------------GGWVGGQSEYVMVPYA  144 (393)
T ss_pred             cccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceeccccc---------------CCCCCceEEEEEechh
Confidence            999999999999999999999999999999999743210   0111000               0012589999999964


Q ss_pred             --ceEECCCCCCh----hhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhH
Q 018072          160 --CVAKINPLAPL----DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRF  233 (361)
Q Consensus       160 --~~~~iP~~~~~----~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~  233 (361)
                        .++++|++++.    .+++.+.+++.++|+++ +..++++|++|||.|+|++|++++|+|+.+|+..|++++++++|+
T Consensus       145 ~~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~  223 (393)
T TIGR02819       145 DFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARL  223 (393)
T ss_pred             hCceEECCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHH
Confidence              79999998753    34667777899999986 568899999999998999999999999999996677778889999


Q ss_pred             HHHHHcCCCEEEcCCCCCccHHHHHHHHcCC-CccEEEEccCCh--------------HHHHHHHHHhcCCCcEEEEEcC
Q 018072          234 EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNI--------------DNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       234 ~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~--------------~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      ++++++|++. +++.... ++.+.+.+++++ ++|++||++|.+              .+++.+++.++++ |+++.+|.
T Consensus       224 ~~a~~~Ga~~-v~~~~~~-~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~i~~~G~  300 (393)
T TIGR02819       224 AQARSFGCET-VDLSKDA-TLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVG-GAIGIPGL  300 (393)
T ss_pred             HHHHHcCCeE-EecCCcc-cHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCC-CEEEEeee
Confidence            9999999974 4443221 266777777776 899999999985              4899999999998 99999998


Q ss_pred             CCC-Cc-e---------eecChhh-hccccEEEEeeecCCCcCCcHHHHHHHHHcCCcccC
Q 018072          299 PSK-DA-V---------FMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRFS  347 (361)
Q Consensus       299 ~~~-~~-~---------~~~~~~~-~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l~~~  347 (361)
                      ... .. .         +.+.... +.+++++.|..   ....+.+.++++++++++++++
T Consensus       301 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~---~~~~~~~~~~~~~~~~g~i~~~  358 (393)
T TIGR02819       301 YVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQ---TPVMKYNRNLMQAILHDRVQIA  358 (393)
T ss_pred             cCCcccccccccccccccccchHHhhccCceEEecc---CChhhhHHHHHHHHHcCCCCHH
Confidence            632 11 1         1121222 22667776532   1112234789999999998653

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=100.00  E-value=5.5e-46  Score=354.09  Aligned_cols=313  Identities=20%  Similarity=0.312  Sum_probs=255.7

Q ss_pred             ccccceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCC
Q 018072            6 GLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSD   85 (361)
Q Consensus         6 ~~~~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~   85 (361)
                      ..|+++.++.+.+..+.+++.+++.|.|+++||+|||.++|||++|++++.|..+...+|.++|||++|+|+++|+++++
T Consensus         8 ~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~   87 (360)
T PLN02586          8 EHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVKK   87 (360)
T ss_pred             hchhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEEECCCCCc
Confidence            47888999999888777999999999999999999999999999999998876544567999999999999999999999


Q ss_pred             CCCCCEEeecCC-CCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEEC
Q 018072           86 LEVGDHVLPVFT-GECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI  164 (361)
Q Consensus        86 ~~~Gd~V~~~~~-~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~i  164 (361)
                      |++||+|++.+. .+|+.|++|+.|+++.|++..+... +.. .+|   .          ...|+|+||+++|.+.++++
T Consensus        88 ~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~-~~~-~~g---~----------~~~G~~aey~~v~~~~~~~l  152 (360)
T PLN02586         88 FKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYN-SIG-HDG---T----------KNYGGYSDMIVVDQHFVLRF  152 (360)
T ss_pred             cCCCCEEEEccccCcCCCCccccCCCcccCCCcccccc-ccc-cCC---C----------cCCCccceEEEEchHHeeeC
Confidence            999999986554 4899999999999999987543200 000 000   0          01258999999999999999


Q ss_pred             CCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhh-HHHHHHcCCCE
Q 018072          165 NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR-FEEAKKFGVTD  243 (361)
Q Consensus       165 P~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~-~~~~~~~G~~~  243 (361)
                      |+++++++++.+++++.|+|+++.+...+++|++|||.|+|++|++++|+|+++|+ +|++++.++++ .+.++++|++.
T Consensus       153 P~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~vi~~~~~~~~~~~~~~~~Ga~~  231 (360)
T PLN02586        153 PDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISSSSNKEDEAINRLGADS  231 (360)
T ss_pred             CCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcchhhhHHHhCCCcE
Confidence            99999999999999999999987666667899999999999999999999999999 77777666655 45667899999


Q ss_pred             EEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEee
Q 018072          244 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTF  322 (361)
Q Consensus       244 vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~  322 (361)
                      ++++.+.     +.++..++ ++|++||++|++..+..++++++++ |+++.+|.......  ++...++ +++.+.|++
T Consensus       232 vi~~~~~-----~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~vG~~~~~~~--~~~~~~~~~~~~i~g~~  302 (360)
T PLN02586        232 FLVSTDP-----EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVN-GKLITLGLPEKPLE--LPIFPLVLGRKLVGGSD  302 (360)
T ss_pred             EEcCCCH-----HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCC-cEEEEeCCCCCCCc--cCHHHHHhCCeEEEEcC
Confidence            8876542     23444443 6999999999877899999999998 99999997643323  3333333 888888887


Q ss_pred             ecCCCcCCcHHHHHHHHHcCCccc
Q 018072          323 FGNYKPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~~l~~  346 (361)
                      .++   ..+++++++++++|++++
T Consensus       303 ~~~---~~~~~~~~~li~~g~i~~  323 (360)
T PLN02586        303 IGG---IKETQEMLDFCAKHNITA  323 (360)
T ss_pred             cCC---HHHHHHHHHHHHhCCCCC
Confidence            654   367999999999999864

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=100.00  E-value=6.5e-44  Score=341.52  Aligned_cols=335  Identities=50%  Similarity=0.854  Sum_probs=272.6

Q ss_pred             cceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 018072            9 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV   88 (361)
Q Consensus         9 ~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~   88 (361)
                      .+|||+++..++++++++++|.|+|.++||+|||+++|+|++|++.+.|... ..+|.++|||++|+|+++|++++.+++
T Consensus         6 ~~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~   84 (373)
T cd08299           6 IKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-TPFPVILGHEAAGIVESVGEGVTTVKP   84 (373)
T ss_pred             ceeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC-CCCCccccccceEEEEEeCCCCccCCC
Confidence            5699999999887799999999999999999999999999999999887652 356889999999999999999999999


Q ss_pred             CCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCC
Q 018072           89 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA  168 (361)
Q Consensus        89 Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~  168 (361)
                      ||+|++.+..+|++|.+|+.++++.|.+.......|.. .++..+....|.+..++.+.|+|+||++++.+.++++|+++
T Consensus        85 Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l  163 (373)
T cd08299          85 GDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLM-QDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAA  163 (373)
T ss_pred             CCEEEECCCCCCCCChhhhCCCcccCcCcccccccccc-cCCccccccCCcccccccCCCcccceEEecccceeeCCCCC
Confidence            99999999999999999999999999875432111221 11111111122222233345799999999999999999999


Q ss_pred             ChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCC
Q 018072          169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  248 (361)
Q Consensus       169 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~  248 (361)
                      ++++++++++++.+||+++.+.+.+++|++|+|+|+|++|++++++|+.+|+.+|+++++++++++.++++|++++++..
T Consensus       164 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~~  243 (373)
T cd08299         164 PLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINPQ  243 (373)
T ss_pred             ChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccc
Confidence            99999999999999999887888999999999999899999999999999986799999999999999999999988876


Q ss_pred             CCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHh-cCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCCC
Q 018072          249 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECV-HDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK  327 (361)
Q Consensus       249 ~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l-~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~  327 (361)
                      +.+.++.+.+..++.+++|+++|++|++..+..++..+ +++ |+++.+|.......+++.+..+.++.++.+++.+.+.
T Consensus       244 ~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  322 (373)
T cd08299         244 DYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGY-GVSVIVGVPPSSQNLSINPMLLLTGRTWKGAVFGGWK  322 (373)
T ss_pred             ccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCC-CEEEEEccCCCCceeecCHHHHhcCCeEEEEEecCCc
Confidence            53323566666666668999999999877888877765 466 9999999765333455555444578899999887765


Q ss_pred             cCCcHHHHHHHHHcCCccc
Q 018072          328 PRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       328 ~~~~~~~~~~~~~~~~l~~  346 (361)
                      .++++.++++++.++.+++
T Consensus       323 ~~~~~~~~~~~~~~~~~~~  341 (373)
T cd08299         323 SKDSVPKLVADYMAKKFNL  341 (373)
T ss_pred             cHHHHHHHHHHHHcCCCCc
Confidence            5577888888887776544

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=100.00  E-value=2e-44  Score=342.24  Aligned_cols=304  Identities=24%  Similarity=0.432  Sum_probs=257.8

Q ss_pred             EEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccC-CCCCCCCcccccceeEEEEEeCCCCCCCCCCCEE
Q 018072           14 AVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHV   92 (361)
Q Consensus        14 ~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~-~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V   92 (361)
                      +++.+++++++++++|.|.|+++||+|||.++|+|++|++.+.+. .+...+|.++|||++|+|+++|+++..+ +||+|
T Consensus         2 ~~~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV   80 (349)
T TIGR03201         2 WMMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAV   80 (349)
T ss_pred             ceEecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEE
Confidence            567788877899999999999999999999999999999886433 2334678999999999999999999887 99999


Q ss_pred             eecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCC------
Q 018072           93 LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP------  166 (361)
Q Consensus        93 ~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~------  166 (361)
                      ++.+..+|++|..|+.++++.|.+....   |..                   ..|+|+||+.+|.+.++++|+      
T Consensus        81 ~~~~~~~cg~c~~c~~g~~~~c~~~~~~---g~~-------------------~~G~~ae~~~v~~~~~~~ip~~~~~~~  138 (349)
T TIGR03201        81 IVPAVIPCGECELCKTGRGTICRAQKMP---GND-------------------MQGGFASHIVVPAKGLCVVDEARLAAA  138 (349)
T ss_pred             EECCCCCCCCChhhhCcCcccCCCCCcc---CcC-------------------CCCcccceEEechHHeEECCccccccc
Confidence            9999999999999999999999865433   211                   124899999999999999999      


Q ss_pred             CCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEc
Q 018072          167 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  246 (361)
Q Consensus       167 ~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~  246 (361)
                      ++++++++.+++++.|+|+++ ....+++|++|+|+|+|++|++++|+|+++|+ +|++++++++|+++++++|++++++
T Consensus       139 ~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~  216 (349)
T TIGR03201       139 GLPLEHVSVVADAVTTPYQAA-VQAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLN  216 (349)
T ss_pred             CCCHHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEec
Confidence            899999999988999999986 45789999999999999999999999999999 8999999999999999999999988


Q ss_pred             CCCCC-ccHHHHHHHHcCC-Ccc----EEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEE
Q 018072          247 TSEHD-RPIQEVIAEMTNG-GVD----RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLK  319 (361)
Q Consensus       247 ~~~~~-~~~~~~i~~~~~~-g~D----vvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~  319 (361)
                      +.+.+ .++.+.+++++++ ++|    ++||++|++..+..++++++++ |+++++|.......+  +...++ +++++.
T Consensus       217 ~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~--~~~~~~~~~~~~~  293 (349)
T TIGR03201       217 PKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG-GTLVVVGYTMAKTEY--RLSNLMAFHARAL  293 (349)
T ss_pred             CccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcC-CeEEEECcCCCCccc--CHHHHhhcccEEE
Confidence            76542 2366777777776 776    8999999988888999999998 999999986533333  333343 788998


Q ss_pred             EeeecCCCcCCcHHHHHHHHHcCCcccCC
Q 018072          320 GTFFGNYKPRTDLPSVVDMYMNKVIRFSS  348 (361)
Q Consensus       320 g~~~~~~~~~~~~~~~~~~~~~~~l~~~~  348 (361)
                      |++.++   .++++++++++++|++++.+
T Consensus       294 g~~~~~---~~~~~~~~~~i~~g~i~~~~  319 (349)
T TIGR03201       294 GNWGCP---PDRYPAALDLVLDGKIQLGP  319 (349)
T ss_pred             EEecCC---HHHHHHHHHHHHcCCCCccc
Confidence            887543   46899999999999997654

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=2.2e-44  Score=344.35  Aligned_cols=306  Identities=22%  Similarity=0.326  Sum_probs=246.4

Q ss_pred             EEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEE
Q 018072           13 AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHV   92 (361)
Q Consensus        13 a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V   92 (361)
                      ++++.+.++.+++.+++.|.|+++||+|||.++|||++|++++.|......+|.++|||++|+|+++|+++++|++||+|
T Consensus         9 ~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV   88 (375)
T PLN02178          9 GWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRV   88 (375)
T ss_pred             EEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccCCCCEE
Confidence            34444444458888999999999999999999999999999988765434568999999999999999999999999999


Q ss_pred             eecCCC-CCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCChh
Q 018072           93 LPVFTG-ECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLD  171 (361)
Q Consensus        93 ~~~~~~-~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~~  171 (361)
                      ++.+.. +|+.|.+|++|+++.|.+..+... + .+..|             ....|+|+||+++|++.++++|++++++
T Consensus        89 ~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~-~-~~~~g-------------~~~~G~~aey~~v~~~~~~~lP~~ls~~  153 (375)
T PLN02178         89 GVGVIIGSCQSCESCNQDLENYCPKVVFTYN-S-RSSDG-------------TRNQGGYSDVIVVDHRFVLSIPDGLPSD  153 (375)
T ss_pred             EEcCccCCCCCChhHhCcchhcCCCcccccc-c-cccCC-------------CcCCCccccEEEEchHHeEECCCCCCHH
Confidence            877665 699999999999999997643200 0 00000             0013589999999999999999999999


Q ss_pred             hhhccccchhhhhhhhhhhcC-CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChh-hHHHHHHcCCCEEEcCCC
Q 018072          172 KVCILSCGVSTGLGATLNVAK-PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK-RFEEAKKFGVTDFVNTSE  249 (361)
Q Consensus       172 ~aa~l~~~~~ta~~a~~~~~~-~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~-~~~~~~~~G~~~vv~~~~  249 (361)
                      +++.++++..|+|+++..... .++|++|+|.|+|++|++++|+|+++|+ +|++++.+++ +.+.++++|+++++++.+
T Consensus       154 ~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~  232 (375)
T PLN02178        154 SGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDRLGADSFLVTTD  232 (375)
T ss_pred             HcchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHhCCCcEEEcCcC
Confidence            999999999999998644332 4689999999999999999999999999 7888877654 478888999999887654


Q ss_pred             CCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh-ccccEEEEeeecCCCc
Q 018072          250 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYKP  328 (361)
Q Consensus       250 ~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~~~~~  328 (361)
                      .     +.+.+.++ ++|++||++|.+..+..++++++++ |+++.+|.....  ..++...+ ++++++.|++.+.   
T Consensus       233 ~-----~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~-G~iv~vG~~~~~--~~~~~~~~~~~~~~i~g~~~~~---  300 (375)
T PLN02178        233 S-----QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVS-GKLVALGLPEKP--LDLPIFPLVLGRKMVGGSQIGG---  300 (375)
T ss_pred             H-----HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCC-CEEEEEccCCCC--CccCHHHHHhCCeEEEEeCccC---
Confidence            2     24444443 7999999999977889999999998 999999976533  33334433 4999999988655   


Q ss_pred             CCcHHHHHHHHHcCCccc
Q 018072          329 RTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       329 ~~~~~~~~~~~~~~~l~~  346 (361)
                      .++++++++++++|++++
T Consensus       301 ~~~~~~~~~l~~~g~i~~  318 (375)
T PLN02178        301 MKETQEMLEFCAKHKIVS  318 (375)
T ss_pred             HHHHHHHHHHHHhCCCcc
Confidence            367999999999999864

>cd08230 glucose_DH Glucose dehydrogenase

Probab=100.00  E-value=2.8e-44  Score=342.03  Aligned_cols=300  Identities=26%  Similarity=0.335  Sum_probs=239.0

Q ss_pred             eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC---CCCCcccccceeEEEEEeCCCCCCCC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT---PLFPRIFGHEAAGVVESVGEGVSDLE   87 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~---~~~p~~~G~e~~G~V~~~G~~v~~~~   87 (361)
                      |||+++..++.+++++++|.|+|+++||||||+++|||++|++++.|.++.   ..+|.++|||++|+|+++|++ +.|+
T Consensus         1 mka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~   79 (355)
T cd08230           1 MKAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLS   79 (355)
T ss_pred             CceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCC
Confidence            789999865434999999999999999999999999999999999886532   235789999999999999999 9999


Q ss_pred             CCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072           88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  167 (361)
Q Consensus        88 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~  167 (361)
                      +||+|++.+..+|+.|+.|++|+++.|.+..+. ..|...                  ..|+|+||+++|++.++++|++
T Consensus        80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~-~~g~~~------------------~~G~~aey~~~~~~~~~~~P~~  140 (355)
T cd08230          80 PGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYT-ERGIKG------------------LHGFMREYFVDDPEYLVKVPPS  140 (355)
T ss_pred             CCCEEEeccccCCCcChhhhCcCcccCCCccee-ccCcCC------------------CCccceeEEEeccccEEECCCC
Confidence            999999999999999999999999999865432 012110                  1258999999999999999999


Q ss_pred             CChhhhhccccchhhhhhhhhh------hcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcC---ChhhHHHHHH
Q 018072          168 APLDKVCILSCGVSTGLGATLN------VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR---SSKRFEEAKK  238 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~~------~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~---~~~~~~~~~~  238 (361)
                      ++ + ++.+..++.+++.++..      ..++++|++|+|+|+|++|++++|+|+++|+ +|+++++   +++|++++++
T Consensus       141 ~~-~-~a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~~  217 (355)
T cd08230         141 LA-D-VGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVEE  217 (355)
T ss_pred             CC-c-ceeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHH
Confidence            98 4 34444466665554321      2236789999999999999999999999999 7999987   6889999999


Q ss_pred             cCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecC-----hhhhc
Q 018072          239 FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-----PINVL  313 (361)
Q Consensus       239 ~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~-----~~~~~  313 (361)
                      +|++. +++.+.+  +.+ ..  ..+++|+|||++|++..+..+++.++++ |+++++|.......++++     ...++
T Consensus       218 ~Ga~~-v~~~~~~--~~~-~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~  290 (355)
T cd08230         218 LGATY-VNSSKTP--VAE-VK--LVGEFDLIIEATGVPPLAFEALPALAPN-GVVILFGVPGGGREFEVDGGELNRDLVL  290 (355)
T ss_pred             cCCEE-ecCCccc--hhh-hh--hcCCCCEEEECcCCHHHHHHHHHHccCC-cEEEEEecCCCCCccccChhhhhhhHhh
Confidence            99986 5554433  333 21  2248999999999977899999999998 999999987642333343     12234


Q ss_pred             cccEEEEeeecCCCcCCcHHHHHHHHHcCC
Q 018072          314 NERTLKGTFFGNYKPRTDLPSVVDMYMNKV  343 (361)
Q Consensus       314 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~  343 (361)
                      |++++.|++.++   +++++++++++.+++
T Consensus       291 k~~~i~g~~~~~---~~~~~~~~~~l~~~~  317 (355)
T cd08230         291 GNKALVGSVNAN---KRHFEQAVEDLAQWK  317 (355)
T ss_pred             cCcEEEEecCCc---hhhHHHHHHHHHhcc
Confidence            999999987544   468899999988766

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=9.6e-44  Score=337.33  Aligned_cols=307  Identities=23%  Similarity=0.350  Sum_probs=253.6

Q ss_pred             eeEEEeecCCCCeEEEEeecCCC-CCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~G   89 (361)
                      |||+++.++++ +++++.|.|+| .++||+|||.++|+|++|+..+..... ..+|.++|||++|+|+++|+++++|++|
T Consensus         1 Mka~~~~~~~~-~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~vG   78 (347)
T PRK10309          1 MKSVVNDTDGI-VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGA-HYYPITLGHEFSGYVEAVGSGVDDLHPG   78 (347)
T ss_pred             CceEEEeCCCc-eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCCC-CCCCcccccceEEEEEEeCCCCCCCCCC
Confidence            79999999886 99999999997 589999999999999999875322111 2358899999999999999999999999


Q ss_pred             CEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCC
Q 018072           90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP  169 (361)
Q Consensus        90 d~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~  169 (361)
                      |+|++.+..+|+.|++|..|.++.|.+..+.   |..                   ..|+|+||+.+|.+.++++|++++
T Consensus        79 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~---g~~-------------------~~G~~aey~~v~~~~~~~lP~~~s  136 (347)
T PRK10309         79 DAVACVPLLPCFTCPECLRGFYSLCAKYDFI---GSR-------------------RDGGNAEYIVVKRKNLFALPTDMP  136 (347)
T ss_pred             CEEEECCCcCCCCCcchhCcCcccCCCccee---ccC-------------------CCCccceeEEeehHHeEECcCCCC
Confidence            9999999999999999999999999865433   211                   135899999999999999999999


Q ss_pred             hhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCC
Q 018072          170 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE  249 (361)
Q Consensus       170 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~  249 (361)
                      +++++.+. ++.++|++ .+...+++|++|+|+|+|++|++++|+|+++|++.|+++++++++++.++++|+++++++..
T Consensus       137 ~~~aa~~~-~~~~~~~~-~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~  214 (347)
T PRK10309        137 IEDGAFIE-PITVGLHA-FHLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSRE  214 (347)
T ss_pred             HHHhhhhh-HHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcc
Confidence            99998875 56678887 46678899999999999999999999999999966899999999999999999999988765


Q ss_pred             CCccHHHHHHHHcCC-Ccc-EEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeec-Ch-hhhccccEEEEeeecC
Q 018072          250 HDRPIQEVIAEMTNG-GVD-RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMT-KP-INVLNERTLKGTFFGN  325 (361)
Q Consensus       250 ~~~~~~~~i~~~~~~-g~D-vvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~-~~-~~~~~~~~l~g~~~~~  325 (361)
                      .+   .+.+..++.+ ++| ++|||+|++..+..++++++++ |+++++|.......++. +. ..+.+++++.|++.+.
T Consensus       215 ~~---~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~  290 (347)
T PRK10309        215 MS---APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPR-AQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNY  290 (347)
T ss_pred             cC---HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccc
Confidence            43   2345566655 888 9999999988999999999998 99999997653322221 11 2234899999988653


Q ss_pred             CC--cCCcHHHHHHHHHcCCcccC
Q 018072          326 YK--PRTDLPSVVDMYMNKVIRFS  347 (361)
Q Consensus       326 ~~--~~~~~~~~~~~~~~~~l~~~  347 (361)
                      ..  .+++++++++++++++++++
T Consensus       291 ~~~~~~~~~~~~~~~~~~g~i~~~  314 (347)
T PRK10309        291 SSPWPGQEWETASRLLTERKLSLE  314 (347)
T ss_pred             cCCcchhHHHHHHHHHHcCCCCch
Confidence            22  24678999999999988543

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=4.7e-44  Score=336.82  Aligned_cols=294  Identities=22%  Similarity=0.296  Sum_probs=247.9

Q ss_pred             EEEeecCCC----CeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 018072           13 AAVAWEAGK----PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV   88 (361)
Q Consensus        13 a~~~~~~~~----~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~   88 (361)
                      |+++.++|.    .++++++|.|+|+++||+|||.++|+|++|++.+.|..+...+|.++|||++|+|+++|+++++|++
T Consensus         1 ~~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~   80 (329)
T TIGR02822         1 AWEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAV   80 (329)
T ss_pred             CeeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCC
Confidence            355666653    3889999999999999999999999999999999886554455789999999999999999999999


Q ss_pred             CCEEeecCC-CCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072           89 GDHVLPVFT-GECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  167 (361)
Q Consensus        89 Gd~V~~~~~-~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~  167 (361)
                      ||+|++.+. .+|+.|++|+.++++.|.+..+.   |..                   ..|+|+||+.+|.+.++++|++
T Consensus        81 Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~---g~~-------------------~~G~~aey~~v~~~~~~~lP~~  138 (329)
T TIGR02822        81 GDRVGIAWLRRTCGVCRYCRRGAENLCPASRYT---GWD-------------------TDGGYAEYTTVPAAFAYRLPTG  138 (329)
T ss_pred             CCEEEEcCccCcCCCChHHhCcCcccCCCcccC---Ccc-------------------cCCcceeEEEeccccEEECCCC
Confidence            999987664 47999999999999999876543   321                   1248999999999999999999


Q ss_pred             CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcC
Q 018072          168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  247 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~  247 (361)
                      +++++++.+++++.|||+++ ..+++++|++|||+|+|++|++++|+|+.+|+ +|++++++++|+++++++|++++++.
T Consensus       139 ~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~  216 (329)
T TIGR02822       139 YDDVELAPLLCAGIIGYRAL-LRASLPPGGRLGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGGA  216 (329)
T ss_pred             CCHHHhHHHhccchHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceeccc
Confidence            99999999999999999997 46889999999999999999999999999999 79999999999999999999998875


Q ss_pred             CCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhh-hccccEEEEeeecCC
Q 018072          248 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNY  326 (361)
Q Consensus       248 ~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~l~g~~~~~~  326 (361)
                      .+..           .+++|+++++.+.++.+..++++++++ |+++.+|..... ...++... +++++++.|++... 
T Consensus       217 ~~~~-----------~~~~d~~i~~~~~~~~~~~~~~~l~~~-G~~v~~G~~~~~-~~~~~~~~~~~~~~~i~g~~~~~-  282 (329)
T TIGR02822       217 YDTP-----------PEPLDAAILFAPAGGLVPPALEALDRG-GVLAVAGIHLTD-TPPLNYQRHLFYERQIRSVTSNT-  282 (329)
T ss_pred             cccC-----------cccceEEEECCCcHHHHHHHHHhhCCC-cEEEEEeccCcc-CCCCCHHHHhhCCcEEEEeecCC-
Confidence            4321           126899999998888999999999997 999999975322 12233333 34899999887543 


Q ss_pred             CcCCcHHHHHHHHHcCCccc
Q 018072          327 KPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       327 ~~~~~~~~~~~~~~~~~l~~  346 (361)
                        +.++.+++++++++++++
T Consensus       283 --~~~~~~~~~l~~~g~i~~  300 (329)
T TIGR02822       283 --RADAREFLELAAQHGVRV  300 (329)
T ss_pred             --HHHHHHHHHHHHhCCCee
Confidence              467889999999998853

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=1.3e-43  Score=337.67  Aligned_cols=309  Identities=22%  Similarity=0.333  Sum_probs=253.7

Q ss_pred             cceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 018072            9 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV   88 (361)
Q Consensus         9 ~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~   88 (361)
                      ..++|+++++++.++++++++.|+|+++||+|||.++++|++|++.+.|......+|.++|||++|+|+++|++++.|++
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~~v~~~~~   87 (357)
T PLN02514          8 KKTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTV   87 (357)
T ss_pred             ceEEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECCCcccccC
Confidence            44999999999988999999999999999999999999999999998876544457899999999999999999999999


Q ss_pred             CCEEeecCCC-CCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072           89 GDHVLPVFTG-ECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  167 (361)
Q Consensus        89 Gd~V~~~~~~-~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~  167 (361)
                      ||+|++.+.. .|++|+.|++++.+.|.+..+..  +.....|             ....|+|+||+++|.+.++++|++
T Consensus        88 Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~--~~~~~~g-------------~~~~G~~aey~~v~~~~~~~iP~~  152 (357)
T PLN02514         88 GDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSY--NDVYTDG-------------KPTQGGFASAMVVDQKFVVKIPEG  152 (357)
T ss_pred             CCEEEEcCccccCCCChhHhCCCcccCCCccccc--cccccCC-------------ccCCCccccEEEEchHHeEECCCC
Confidence            9999866544 69999999999999998753220  0000000             112358999999999999999999


Q ss_pred             CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCCCEEEc
Q 018072          168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDFVN  246 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~-~~~G~~~vv~  246 (361)
                      +++++++.+++++.|||+++.+....++|++|+|+|+|++|++++|+|+.+|+ +|+++++++++++.+ +++|++.+++
T Consensus       153 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~-~vi~~~~~~~~~~~~~~~~Ga~~~i~  231 (357)
T PLN02514        153 MAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSDKKREEALEHLGADDYLV  231 (357)
T ss_pred             CCHHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhcCCcEEec
Confidence            99999999999999999997666667899999999999999999999999999 788787777766555 5699988776


Q ss_pred             CCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh-ccccEEEEeeecC
Q 018072          247 TSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGN  325 (361)
Q Consensus       247 ~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~~  325 (361)
                      ..+.     +.+...+. ++|++||++|....+..++++++++ |+++.+|.....  ..++...+ ++++++.|++.+.
T Consensus       232 ~~~~-----~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~~~~~i~g~~~~~  302 (357)
T PLN02514        232 SSDA-----AEMQEAAD-SLDYIIDTVPVFHPLEPYLSLLKLD-GKLILMGVINTP--LQFVTPMLMLGRKVITGSFIGS  302 (357)
T ss_pred             CCCh-----HHHHHhcC-CCcEEEECCCchHHHHHHHHHhccC-CEEEEECCCCCC--CcccHHHHhhCCcEEEEEecCC
Confidence            5432     23344433 7999999999877899999999998 999999986533  23334333 4999999998665


Q ss_pred             CCcCCcHHHHHHHHHcCCcc
Q 018072          326 YKPRTDLPSVVDMYMNKVIR  345 (361)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~l~  345 (361)
                         ..+++++++++++++++
T Consensus       303 ---~~~~~~~~~~~~~g~l~  319 (357)
T PLN02514        303 ---MKETEEMLEFCKEKGLT  319 (357)
T ss_pred             ---HHHHHHHHHHHHhCCCc
Confidence               36799999999999874

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=100.00  E-value=5.6e-43  Score=334.25  Aligned_cols=332  Identities=49%  Similarity=0.866  Sum_probs=284.2

Q ss_pred             eEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCE
Q 018072           12 KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDH   91 (361)
Q Consensus        12 ~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~   91 (361)
                      ||+++.+.+.++++++++.|.++++||+|||.++++|++|++.+.+... ...|.++|||++|+|+++|++++.+++||+
T Consensus         2 ~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~-~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd~   80 (365)
T cd05279           2 KAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP-TPLPVILGHEGAGIVESIGPGVTTLKPGDK   80 (365)
T ss_pred             ceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCCCCE
Confidence            6889998887799999999999999999999999999999998877543 346789999999999999999999999999


Q ss_pred             EeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCChh
Q 018072           92 VLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLD  171 (361)
Q Consensus        92 V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~~  171 (361)
                      |++.+...|++|.+|+.+..++|....+....|.. .+|...|..+|.+..++.+.|+|++|+.++.+.++++|++++++
T Consensus        81 Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~~  159 (365)
T cd05279          81 VIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLM-SDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLE  159 (365)
T ss_pred             EEEcCCCCCCCChhhcCCCcccCCCcccccccccc-cCCcceeeccCCccccccccccccceEEecCCceEECCCCCCHH
Confidence            99999999999999999999999887665332332 45556666677777777777899999999999999999999999


Q ss_pred             hhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCC
Q 018072          172 KVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD  251 (361)
Q Consensus       172 ~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~  251 (361)
                      +++.+++++.+||+++.+.+.+++|++|||+|+|++|++++|+|+.+|+..|+++++++++++.++++|++++++....+
T Consensus       160 ~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~  239 (365)
T cd05279         160 KVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQD  239 (365)
T ss_pred             HhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeeccccccc
Confidence            99999999999999988888999999999998899999999999999996688898899999999999999988876652


Q ss_pred             ccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhc-CCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCCCcCC
Q 018072          252 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH-DGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRT  330 (361)
Q Consensus       252 ~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~-~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~  330 (361)
                      .++.+.+..++++++|++||++|....+..++++++ ++ |+++.+|.........++...+.++.++.|++.+++...+
T Consensus       240 ~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~  318 (365)
T cd05279         240 KPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGG-GTSVVVGVPPSGTEATLDPNDLLTGRTIKGTVFGGWKSKD  318 (365)
T ss_pred             chHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCC-CEEEEEecCCCCCceeeCHHHHhcCCeEEEEeccCCchHh
Confidence            236777777775689999999997788999999999 97 9999998754223344444444678889998887776678


Q ss_pred             cHHHHHHHHHcCCccc
Q 018072          331 DLPSVVDMYMNKVIRF  346 (361)
Q Consensus       331 ~~~~~~~~~~~~~l~~  346 (361)
                      ++.+++++++++.+++
T Consensus       319 ~~~~~~~l~~~~~l~~  334 (365)
T cd05279         319 SVPKLVALYRQKKFPL  334 (365)
T ss_pred             HHHHHHHHHHcCCcch
Confidence            8999999999998764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=100.00  E-value=9e-43  Score=331.13  Aligned_cols=304  Identities=30%  Similarity=0.478  Sum_probs=260.5

Q ss_pred             eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCC---C--------CCCCCcccccceeEEEEEe
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG---Q--------TPLFPRIFGHEAAGVVESV   79 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~---~--------~~~~p~~~G~e~~G~V~~~   79 (361)
                      |||+++.++++ ++++++|.|+|.++||+|||.++++|++|+..+.+..   +        ...+|.++|||++|+|+++
T Consensus         1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v   79 (351)
T cd08233           1 MKAARYHGRKD-IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEV   79 (351)
T ss_pred             CceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEe
Confidence            79999998886 9999999999999999999999999999987654321   1        0136889999999999999


Q ss_pred             CCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEecc
Q 018072           80 GEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG  159 (361)
Q Consensus        80 G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~  159 (361)
                      |++++.|++||+|+..+..+|++|.+|++++.+.|.+..+.   |..                  ...|+|+||+.++.+
T Consensus        80 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~------------------~~~g~~a~~~~~~~~  138 (351)
T cd08233          80 GSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFI---GLG------------------GGGGGFAEYVVVPAY  138 (351)
T ss_pred             CCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCcee---ccC------------------CCCCceeeEEEechH
Confidence            99999999999999999999999999999999999865432   211                  012589999999999


Q ss_pred             ceEECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc
Q 018072          160 CVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF  239 (361)
Q Consensus       160 ~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~  239 (361)
                      .++++|+++++++++.+ .++.|||+++ ...++++|++|+|+|+|.+|++++|+|+.+|+.+|+++++++++.++++++
T Consensus       139 ~~~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~  216 (351)
T cd08233         139 HVHKLPDNVPLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEEL  216 (351)
T ss_pred             HeEECcCCCCHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh
Confidence            99999999999998876 5788999996 778899999999999999999999999999987899999999999999999


Q ss_pred             CCCEEEcCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccE
Q 018072          240 GVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERT  317 (361)
Q Consensus       240 G~~~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~  317 (361)
                      |++.++++.+.+  +.+.+++++++ ++|++||++|.+..++.++++++++ |+++.+|.....  ..++...++ ++++
T Consensus       217 ga~~~i~~~~~~--~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~  291 (351)
T cd08233         217 GATIVLDPTEVD--VVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR-GTAVNVAIWEKP--ISFNPNDLVLKEKT  291 (351)
T ss_pred             CCCEEECCCccC--HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-CEEEEEccCCCC--CccCHHHHHhhCcE
Confidence            999999887655  77888888776 7999999999878899999999998 999999986533  334443334 8999


Q ss_pred             EEEeeecCCCcCCcHHHHHHHHHcCCccc
Q 018072          318 LKGTFFGNYKPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       318 l~g~~~~~~~~~~~~~~~~~~~~~~~l~~  346 (361)
                      +.|++.+.   .+++++++++++++++++
T Consensus       292 i~g~~~~~---~~~~~~~~~~~~~g~l~~  317 (351)
T cd08233         292 LTGSICYT---REDFEEVIDLLASGKIDA  317 (351)
T ss_pred             EEEEeccC---cchHHHHHHHHHcCCCCh
Confidence            99987543   478999999999999854

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=100.00  E-value=4.4e-42  Score=328.09  Aligned_cols=332  Identities=39%  Similarity=0.673  Sum_probs=268.9

Q ss_pred             cceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 018072            9 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV   88 (361)
Q Consensus         9 ~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~   88 (361)
                      ++|||+++.+++.++++++.+.|.+.++||+|||.++++|++|+.++.+..+ ..+|.++|||++|+|+++|+++..+++
T Consensus         1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~   79 (365)
T cd08278           1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-TPLPAVLGHEGAGVVEAVGSAVTGLKP   79 (365)
T ss_pred             CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCC
Confidence            4699999999777799999999999999999999999999999999887554 346889999999999999999999999


Q ss_pred             CCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccC-CCccc-cccCcccceeeEEEeccceEECCC
Q 018072           89 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSIN-GEPVN-HFLGTSTFSEYTVVHSGCVAKINP  166 (361)
Q Consensus        89 Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~-g~~~~-~~~~~G~~ae~v~v~~~~~~~iP~  166 (361)
                      ||+|++.+. .|+.|..|+.++.++|.+.....-.|.. ++|...+... |++.. +....|+|++|+.++.+.++++|+
T Consensus        80 Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~  157 (365)
T cd08278          80 GDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRR-PDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDK  157 (365)
T ss_pred             CCEEEEccc-CCCCChHHhCCCcccccCcccccccccc-cCCcccccccCCcccccccccccceeeEEEecchhEEECCC
Confidence            999998775 8999999999999999864432111111 1111111100 00000 022346899999999999999999


Q ss_pred             CCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEc
Q 018072          167 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  246 (361)
Q Consensus       167 ~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~  246 (361)
                      ++++++++.+++++.|||.++.+...+++|++|+|+|+|.+|++++|+|+++|++.|++++++++|.+.++++|++.+++
T Consensus       158 ~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~  237 (365)
T cd08278         158 DVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVIN  237 (365)
T ss_pred             CCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEec
Confidence            99999999999999999998888888999999999988999999999999999977999999999999999999999988


Q ss_pred             CCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh-ccccEEEEeeecC
Q 018072          247 TSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGN  325 (361)
Q Consensus       247 ~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~~  325 (361)
                      +...+  +.+.+..+++.++|+++|++|++..+..++++++++ |+++.+|.........++...+ .+++++.++..+.
T Consensus       238 ~~~~~--~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (365)
T cd08278         238 PKEED--LVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR-GTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGD  314 (365)
T ss_pred             CCCcC--HHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccC-CEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCC
Confidence            76654  677777777449999999999878899999999998 9999999764223334444545 4899998877544


Q ss_pred             CCcCCcHHHHHHHHHcCCccc
Q 018072          326 YKPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~l~~  346 (361)
                      ....+.+++++++++++++++
T Consensus       315 ~~~~~~~~~~~~~l~~g~l~~  335 (365)
T cd08278         315 SVPQEFIPRLIELYRQGKFPF  335 (365)
T ss_pred             cChHHHHHHHHHHHHcCCCCh
Confidence            333456788999999998754

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=100.00  E-value=3.4e-42  Score=328.41  Aligned_cols=312  Identities=26%  Similarity=0.414  Sum_probs=261.1

Q ss_pred             eEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCC------
Q 018072           12 KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSD------   85 (361)
Q Consensus        12 ~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~------   85 (361)
                      ||+++.++++.+++++++.|.|+++||+|||.++++|++|+....|..+...+|.++|||++|+|+++|++++.      
T Consensus         2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~   81 (361)
T cd08231           2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEP   81 (361)
T ss_pred             eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccCCc
Confidence            79999999866999999999999999999999999999999988876543567889999999999999999986      


Q ss_pred             CCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEecc-ceEEC
Q 018072           86 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG-CVAKI  164 (361)
Q Consensus        86 ~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~-~~~~i  164 (361)
                      |++||+|++.+.++|+.|..|+.+..+.|.+..+.   |.....+   .         ....|+|+||+.++++ .++++
T Consensus        82 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~---~~~~~~~---~---------~~~~g~~a~~~~v~~~~~~~~l  146 (361)
T cd08231          82 LKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKY---GHEASCD---D---------PHLSGGYAEHIYLPPGTAIVRV  146 (361)
T ss_pred             cCCCCEEEEcccCCCCCChhHhCcCccccccchhc---ccccccc---C---------CCCCcccceEEEecCCCceEEC
Confidence            99999999999999999999999999999876554   3210000   0         0113589999999986 79999


Q ss_pred             CCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEE
Q 018072          165 NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF  244 (361)
Q Consensus       165 P~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~v  244 (361)
                      |++++.++++++++++.|||+++.+....++|++|||+|+|++|++++|+|+.+|+++|+++++++++.++++++|++.+
T Consensus       147 P~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~v  226 (361)
T cd08231         147 PDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADAT  226 (361)
T ss_pred             CCCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeE
Confidence            99999999999988999999998666666799999999999999999999999998789999999999999999999998


Q ss_pred             EcCCCCC-ccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEe
Q 018072          245 VNTSEHD-RPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGT  321 (361)
Q Consensus       245 v~~~~~~-~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~  321 (361)
                      +++...+ .++.+.+..++++ ++|++||++|+...+..++++++++ |+++.+|.........++...++ +++++.++
T Consensus       227 i~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  305 (361)
T cd08231         227 IDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG-GTYVLVGSVAPAGTVPLDPERIVRKNLTIIGV  305 (361)
T ss_pred             EcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccC-CEEEEEcCCCCCCccccCHHHHhhcccEEEEc
Confidence            8876543 1233567777776 8999999999877889999999998 99999997653333444443334 89999988


Q ss_pred             eecCCCcCCcHHHHHHHHHcC
Q 018072          322 FFGNYKPRTDLPSVVDMYMNK  342 (361)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~  342 (361)
                      +.++   +++++++++++.++
T Consensus       306 ~~~~---~~~~~~~~~~~~~~  323 (361)
T cd08231         306 HNYD---PSHLYRAVRFLERT  323 (361)
T ss_pred             ccCC---chhHHHHHHHHHhc
Confidence            7543   46789999998877

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=100.00  E-value=2.5e-42  Score=326.77  Aligned_cols=284  Identities=18%  Similarity=0.211  Sum_probs=228.1

Q ss_pred             ceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC----CCCCcccccceeEEEEEeCCCCCC
Q 018072           10 TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT----PLFPRIFGHEAAGVVESVGEGVSD   85 (361)
Q Consensus        10 ~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~----~~~p~~~G~e~~G~V~~~G~~v~~   85 (361)
                      .-+|+++.++++ ++++++|.|. +++||||||.++|||++|++++.|.+..    ..+|.++|||++|+|+++|.+  .
T Consensus         2 ~~~~~~~~~~~~-~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~   77 (341)
T cd08237           2 INQVYRLVRPKF-FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--T   77 (341)
T ss_pred             cccceEEeccce-EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--c
Confidence            368899999997 9999999995 9999999999999999999999886532    357999999999999998764  7


Q ss_pred             CCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECC
Q 018072           86 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN  165 (361)
Q Consensus        86 ~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP  165 (361)
                      |++||||++.+..+|+ |..|  +..+.|.+..+.   |.. .                  .|+|+||+++|++.++++|
T Consensus        78 ~~vGdrV~~~~~~~~~-~~~~--~~~~~c~~~~~~---g~~-~------------------~G~~aey~~v~~~~~~~vP  132 (341)
T cd08237          78 YKVGTKVVMVPNTPVE-KDEI--IPENYLPSSRFR---SSG-Y------------------DGFMQDYVFLPPDRLVKLP  132 (341)
T ss_pred             cCCCCEEEECCCCCch-hccc--chhccCCCccee---Eec-C------------------CCceEEEEEEchHHeEECC
Confidence            9999999999888877 4455  355678765433   211 1                  2489999999999999999


Q ss_pred             CCCChhhhhccccchhhhhhhhhh--hcCCCCCCEEEEEcCCHHHHHHHHHHHH-cCCCeEEEEcCChhhHHHHHHcCCC
Q 018072          166 PLAPLDKVCILSCGVSTGLGATLN--VAKPERGSSVAVFGLGAVGLAAAEGARI-AGASRIIGVDRSSKRFEEAKKFGVT  242 (361)
Q Consensus       166 ~~~~~~~aa~l~~~~~ta~~a~~~--~~~~~~g~~VlI~G~g~vG~~a~~~a~~-~g~~~Vi~~~~~~~~~~~~~~~G~~  242 (361)
                      +++++++|+++. ++.++|+++..  .+.+++|++|||+|+|++|++++|+|++ .|..+|++++++++|++++++++.+
T Consensus       133 ~~l~~~~aa~~~-~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~  211 (341)
T cd08237         133 DNVDPEVAAFTE-LVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADET  211 (341)
T ss_pred             CCCChHHhhhhc-hHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCce
Confidence            999999887665 88899998643  3457899999999999999999999986 5655899999999999999886654


Q ss_pred             EEEcCCCCCccHHHHHHHHcCC-CccEEEEccC---ChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccE
Q 018072          243 DFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG---NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERT  317 (361)
Q Consensus       243 ~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g---~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~  317 (361)
                      ..++             .+.+. ++|+|||++|   .+.++..++++++++ |+++++|.....  ..++...++ |+++
T Consensus       212 ~~~~-------------~~~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~k~~~  275 (341)
T cd08237         212 YLID-------------DIPEDLAVDHAFECVGGRGSQSAINQIIDYIRPQ-GTIGLMGVSEYP--VPINTRMVLEKGLT  275 (341)
T ss_pred             eehh-------------hhhhccCCcEEEECCCCCccHHHHHHHHHhCcCC-cEEEEEeecCCC--cccCHHHHhhCceE
Confidence            3221             01122 6999999999   456889999999998 999999975433  334444344 9999


Q ss_pred             EEEeeecCCCcCCcHHHHHHHHHcC
Q 018072          318 LKGTFFGNYKPRTDLPSVVDMYMNK  342 (361)
Q Consensus       318 l~g~~~~~~~~~~~~~~~~~~~~~~  342 (361)
                      +.|+..++   .+++++++++++++
T Consensus       276 i~g~~~~~---~~~~~~~~~~~~~~  297 (341)
T cd08237         276 LVGSSRST---REDFERAVELLSRN  297 (341)
T ss_pred             EEEecccC---HHHHHHHHHHHHhC
Confidence            99987543   46799999999988

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=100.00  E-value=3.7e-41  Score=320.06  Aligned_cols=310  Identities=25%  Similarity=0.335  Sum_probs=260.8

Q ss_pred             eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   90 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd   90 (361)
                      |||+++.+++. +++++.+.|.+.++||+|||.++++|++|++.+.+.......|.++|||++|+|+++|++++.+++||
T Consensus         1 mka~~~~~~~~-~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd   79 (351)
T cd08285           1 MKAFAMLGIGK-VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKPGD   79 (351)
T ss_pred             CceEEEccCCc-cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCCCC
Confidence            79999999986 89999999999999999999999999999998777654456689999999999999999999999999


Q ss_pred             EEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEecc--ceEECCCCC
Q 018072           91 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPLA  168 (361)
Q Consensus        91 ~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~--~~~~iP~~~  168 (361)
                      +|+..+..+|+.|..|..|+++.|.+.. .   |+...               ....|+|+||+.++.+  .++++|+++
T Consensus        80 ~V~~~~~~~~~~c~~c~~g~~~~~~~~~-~---~~~~~---------------~~~~g~~~~y~~v~~~~~~~~~lP~~~  140 (351)
T cd08285          80 RVIVPAITPDWRSVAAQRGYPSQSGGML-G---GWKFS---------------NFKDGVFAEYFHVNDADANLAPLPDGL  140 (351)
T ss_pred             EEEEcCcCCCCCCHHHHCcCcccCcCCC-C---Ccccc---------------CCCCcceeEEEEcchhhCceEECCCCC
Confidence            9999888899999999999999998642 0   11100               1113589999999974  899999999


Q ss_pred             ChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCC
Q 018072          169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  248 (361)
Q Consensus       169 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~  248 (361)
                      ++++++.++.++.|||++ .+.+.+++|++|||+|+|++|++++|+|+.+|+..|+++++++++.++++++|++.++++.
T Consensus       141 ~~~~aa~~~~~~~ta~~~-~~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~  219 (351)
T cd08285         141 TDEQAVMLPDMMSTGFHG-AELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYK  219 (351)
T ss_pred             CHHHhhhhccchhhHHHH-HHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCC
Confidence            999999998899999998 4778899999999998899999999999999997799999999999999999999999877


Q ss_pred             CCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh---ccccEEEEeeec
Q 018072          249 EHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV---LNERTLKGTFFG  324 (361)
Q Consensus       249 ~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~---~~~~~l~g~~~~  324 (361)
                      ..+  +.+.+..++.+ ++|+++|++|++..+..++++++++ |+++.+|.......+.++...+   ++..++.+.+..
T Consensus       220 ~~~--~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  296 (351)
T cd08285         220 NGD--VVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG-GTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCP  296 (351)
T ss_pred             CCC--HHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcC-CEEEEecccCCCceeecChhhhhhhccccEEEEeecC
Confidence            654  67777777665 8999999999878899999999998 9999999766433334332111   366677665432


Q ss_pred             CCCcCCcHHHHHHHHHcCCccc
Q 018072          325 NYKPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~l~~  346 (361)
                      .  .+++++++++++++|++++
T Consensus       297 ~--~~~~~~~~~~~~~~g~i~~  316 (351)
T cd08285         297 G--GRLRMERLASLIEYGRVDP  316 (351)
T ss_pred             C--ccccHHHHHHHHHcCCCCh
Confidence            2  3578999999999999876

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=100.00  E-value=2.4e-40  Score=315.92  Aligned_cols=330  Identities=41%  Similarity=0.725  Sum_probs=270.2

Q ss_pred             eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   90 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd   90 (361)
                      |||+++.+++.+++++++|.|++.+++|+|||.++++|+.|+..+.|..+ ..+|.++|+|++|+|+++|++++.+++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd   79 (363)
T cd08279           1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP-APLPAVLGHEGAGVVEEVGPGVTGVKPGD   79 (363)
T ss_pred             CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC-CCCCccccccceEEEEEeCCCccccCCCC
Confidence            79999999977799999999999999999999999999999998887554 45678999999999999999999999999


Q ss_pred             EEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCCh
Q 018072           91 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL  170 (361)
Q Consensus        91 ~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~  170 (361)
                      +|+..+..+|++|.+|.+++.+.|.+..+. .+|.. .++..++...|.......+.|+|++|+.++.+.++++|+++++
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~  157 (363)
T cd08279          80 HVVLSWIPACGTCRYCSRGQPNLCDLGAGI-LGGQL-PDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPL  157 (363)
T ss_pred             EEEECCCCCCCCChhhcCCCcccCcccccc-ccccc-CCCcccccccCccccccccCccceeeEEeccccEEECCCCCCh
Confidence            999999999999999999999999864321 00000 1111111111222222234579999999999999999999999


Q ss_pred             hhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCC
Q 018072          171 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH  250 (361)
Q Consensus       171 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~  250 (361)
                      ++++++++++.+||.++.+..++++|++|+|+|+|.+|++++++|+..|+.+|+++++++++.+.++++|++++++....
T Consensus       158 ~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~~  237 (363)
T cd08279         158 DRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASED  237 (363)
T ss_pred             HHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCCc
Confidence            99999999999999998888899999999999889999999999999999559999999999999999999888887665


Q ss_pred             CccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeecCCCc
Q 018072          251 DRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKP  328 (361)
Q Consensus       251 ~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~~~~~  328 (361)
                      +  +...+..++++ ++|+++|++++...+..++++++++ |+++.+|.........+....+. ++..+.++.++....
T Consensus       238 ~--~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (363)
T cd08279         238 D--AVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG-GTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSANP  314 (363)
T ss_pred             c--HHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcC-CeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcCc
Confidence            4  67777777755 8999999999767889999999998 99999987553233344444444 788888877655445


Q ss_pred             CCcHHHHHHHHHcCCccc
Q 018072          329 RTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       329 ~~~~~~~~~~~~~~~l~~  346 (361)
                      .+.++++++++++++++.
T Consensus       315 ~~~~~~~~~l~~~g~l~~  332 (363)
T cd08279         315 RRDIPRLLDLYRAGRLKL  332 (363)
T ss_pred             HHHHHHHHHHHHcCCCCc
Confidence            678899999999998764

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.1e-40  Score=314.54  Aligned_cols=301  Identities=26%  Similarity=0.446  Sum_probs=256.6

Q ss_pred             eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   90 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd   90 (361)
                      |||+++.+++.+++++++|.|+++++||+|||.++++|++|+..+.|..+....|.++|||++|+|+++|+++..+++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd   80 (333)
T cd08296           1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGD   80 (333)
T ss_pred             CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCCCC
Confidence            79999999965699999999999999999999999999999999887654445688999999999999999999999999


Q ss_pred             EEeecC-CCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCC
Q 018072           91 HVLPVF-TGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP  169 (361)
Q Consensus        91 ~V~~~~-~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~  169 (361)
                      +|++.+ ...|+.|.+|..|+++.|.+....   |..                   ..|+|+||+.++.+.++++|++++
T Consensus        81 ~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~---~~~-------------------~~g~~a~~~~v~~~~~~~lp~~~~  138 (333)
T cd08296          81 RVGVGWHGGHCGTCDACRRGDFVHCENGKVT---GVT-------------------RDGGYAEYMLAPAEALARIPDDLD  138 (333)
T ss_pred             EEEeccccCCCCCChhhhCcCcccCCCCCcc---Ccc-------------------cCCcceeEEEEchhheEeCCCCCC
Confidence            998754 458999999999999999875543   211                   124899999999999999999999


Q ss_pred             hhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCC
Q 018072          170 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE  249 (361)
Q Consensus       170 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~  249 (361)
                      +++++.+++++.+||+++. ...+.++++|+|+|+|++|++++|+|+.+|+ +|+++++++++++.++++|+++++++..
T Consensus       139 ~~~aa~l~~~~~ta~~~~~-~~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~  216 (333)
T cd08296         139 AAEAAPLLCAGVTTFNALR-NSGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTSK  216 (333)
T ss_pred             HHHhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCCC
Confidence            9999999999999999874 4589999999999999999999999999999 7999999999999999999999988766


Q ss_pred             CCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeecCCCc
Q 018072          250 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKP  328 (361)
Q Consensus       250 ~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~~~~~  328 (361)
                      .+  +.+.+..+  +++|+++|++|.+..+..++++++++ |+++.+|....  ..+++...++ +++++.++..+.   
T Consensus       217 ~~--~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~~---  286 (333)
T cd08296         217 ED--VAEALQEL--GGAKLILATAPNAKAISALVGGLAPR-GKLLILGAAGE--PVAVSPLQLIMGRKSIHGWPSGT---  286 (333)
T ss_pred             cc--HHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccC-CEEEEEecCCC--CCCcCHHHHhhcccEEEEeCcCC---
Confidence            54  66666555  37999999998768899999999998 99999997652  3344444344 999999987543   


Q ss_pred             CCcHHHHHHHHHcCCcc
Q 018072          329 RTDLPSVVDMYMNKVIR  345 (361)
Q Consensus       329 ~~~~~~~~~~~~~~~l~  345 (361)
                      ..+++++++++++++++
T Consensus       287 ~~~~~~~~~~~~~~~l~  303 (333)
T cd08296         287 ALDSEDTLKFSALHGVR  303 (333)
T ss_pred             HHHHHHHHHHHHhCCCC
Confidence            36788888888877664

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>PRK10083 putative oxidoreductase; Provisional

Probab=100.00  E-value=3.5e-40  Score=311.71  Aligned_cols=300  Identities=23%  Similarity=0.365  Sum_probs=251.2

Q ss_pred             eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   90 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd   90 (361)
                      |||+++.+++. ++++++|.|.|+++|++||+.++++|++|+..+.|..+..++|.++|||++|+|+++|++++.+++||
T Consensus         1 m~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd   79 (339)
T PRK10083          1 MKSIVIEKPNS-LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGE   79 (339)
T ss_pred             CeEEEEecCCe-eEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCCCC
Confidence            78999999886 99999999999999999999999999999998887655456789999999999999999999999999


Q ss_pred             EEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCCh
Q 018072           91 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL  170 (361)
Q Consensus        91 ~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~  170 (361)
                      +|++.+..+|+.|..|.+++++.|.+....   +.                   ...|+|+||+.++.+.++++|+++++
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~g~~~~~~~~~~~~~~~ip~~~~~  137 (339)
T PRK10083         80 RVAVDPVISCGHCYPCSIGKPNVCTSLVVL---GV-------------------HRDGGFSEYAVVPAKNAHRIPDAIAD  137 (339)
T ss_pred             EEEEccccCCCCCccccCcCcccCCCCceE---EE-------------------ccCCcceeeEEechHHeEECcCCCCH
Confidence            999999999999999999999999765432   11                   11248999999999999999999999


Q ss_pred             hhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHH-cCCCeEEEEcCChhhHHHHHHcCCCEEEcCCC
Q 018072          171 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARI-AGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE  249 (361)
Q Consensus       171 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~-~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~  249 (361)
                      ++++ +..++.++|+ +.+..++++|++|+|+|+|++|++++|+|+. +|+..|++++++++|.++++++|+++++++..
T Consensus       138 ~~a~-~~~~~~~a~~-~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~  215 (339)
T PRK10083        138 QYAV-MVEPFTIAAN-VTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ  215 (339)
T ss_pred             HHHh-hhchHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc
Confidence            8876 4457888885 4577889999999999999999999999996 59977999999999999999999999998765


Q ss_pred             CCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeecCCC
Q 018072          250 HDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYK  327 (361)
Q Consensus       250 ~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~~~~  327 (361)
                      .+  +.+.+..  .+ ++|++||++|++..+..++++++++ |+++.+|.....  ..+....+. +++++.++..    
T Consensus       216 ~~--~~~~~~~--~g~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~----  284 (339)
T PRK10083        216 EP--LGEALEE--KGIKPTLIIDAACHPSILEEAVTLASPA-ARIVLMGFSSEP--SEIVQQGITGKELSIFSSRL----  284 (339)
T ss_pred             cc--HHHHHhc--CCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCC--ceecHHHHhhcceEEEEEec----
Confidence            43  5555532  23 5689999999877899999999998 999999976532  222232233 7788777653    


Q ss_pred             cCCcHHHHHHHHHcCCccc
Q 018072          328 PRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       328 ~~~~~~~~~~~~~~~~l~~  346 (361)
                      ..+++++++++++++++++
T Consensus       285 ~~~~~~~~~~~~~~g~l~~  303 (339)
T PRK10083        285 NANKFPVVIDWLSKGLIDP  303 (339)
T ss_pred             ChhhHHHHHHHHHcCCCCh
Confidence            2467899999999998865

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=100.00  E-value=4.7e-40  Score=318.59  Aligned_cols=298  Identities=19%  Similarity=0.239  Sum_probs=236.5

Q ss_pred             cceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhcc-ccCCC-C-----CCCCcccccceeEEEEEeCC
Q 018072            9 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFW-ESKGQ-T-----PLFPRIFGHEAAGVVESVGE   81 (361)
Q Consensus         9 ~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~-~g~~~-~-----~~~p~~~G~e~~G~V~~~G~   81 (361)
                      |+|||+++.++++ ++++++|.|+|+++||+|||.++|||++|++.+ .|... .     ..+|.++|||++|+|+++|+
T Consensus         1 m~~~a~~~~~~~~-l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~   79 (410)
T cd08238           1 MKTKAWRMYGKGD-LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK   79 (410)
T ss_pred             CCcEEEEEEcCCc-eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence            4599999999987 999999999999999999999999999999976 44321 1     24688999999999999999


Q ss_pred             CCC-CCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEecc-
Q 018072           82 GVS-DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG-  159 (361)
Q Consensus        82 ~v~-~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~-  159 (361)
                      +++ .|++||||++.+...|+.|..|. ++             |.. .                  .|+|+||+++|.+ 
T Consensus        80 ~v~~~~~vGdrV~~~~~~~c~~~~~c~-~~-------------g~~-~------------------~G~~aey~~v~~~~  126 (410)
T cd08238          80 KWQGKYKPGQRFVIQPALILPDGPSCP-GY-------------SYT-Y------------------PGGLATYHIIPNEV  126 (410)
T ss_pred             CccCCCCCCCEEEEcCCcCCCCCCCCC-Cc-------------ccc-C------------------CCcceEEEEecHHh
Confidence            998 59999999999999999988772 10             110 1                  2489999999987 


Q ss_pred             ---ceEECCCCCChhhhhccccchh---hhhhhh--------hhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcC--CCe
Q 018072          160 ---CVAKINPLAPLDKVCILSCGVS---TGLGAT--------LNVAKPERGSSVAVFGL-GAVGLAAAEGARIAG--ASR  222 (361)
Q Consensus       160 ---~~~~iP~~~~~~~aa~l~~~~~---ta~~a~--------~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g--~~~  222 (361)
                         .++++|+++++++++++. ++.   +++.+.        .+.+++++|++|+|+|+ |++|++++|+|+++|  +.+
T Consensus       127 ~~~~~~~lP~~l~~~~aal~e-pl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~  205 (410)
T cd08238         127 MEQDCLLIYEGDGYAEASLVE-PLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSL  205 (410)
T ss_pred             ccCCeEECCCCCCHHHHhhcc-hHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCce
Confidence               689999999999988652 221   233332        24578899999999985 999999999999975  457


Q ss_pred             EEEEcCChhhHHHHHHc--------CCC-EEEcCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcE
Q 018072          223 IIGVDRSSKRFEEAKKF--------GVT-DFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGV  292 (361)
Q Consensus       223 Vi~~~~~~~~~~~~~~~--------G~~-~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~  292 (361)
                      |++++++++|++.++++        |++ .++++.+. .++.+.+++++++ ++|++||++|++..+..++++++++ |+
T Consensus       206 Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~-~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~-G~  283 (410)
T cd08238         206 LVVTDVNDERLARAQRLFPPEAASRGIELLYVNPATI-DDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPD-GC  283 (410)
T ss_pred             EEEEcCCHHHHHHHHHhccccccccCceEEEECCCcc-ccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccC-Ce
Confidence            99999999999999997        776 46665432 2377788888877 8999999999888999999999997 88


Q ss_pred             EEEEcCC-CCCceeecChhhhc-cccEEEEeeecCCCcCCcHHHHHHHHHcCCccc
Q 018072          293 AVLVGVP-SKDAVFMTKPINVL-NERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       293 iv~~g~~-~~~~~~~~~~~~~~-~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l~~  346 (361)
                      ++.++.. ......+++...++ +++++.|+..++   ..+++++++++++|++++
T Consensus       284 ~v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~li~~g~i~~  336 (410)
T cd08238         284 LNFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGGN---TDDMKEAIDLMAAGKLNP  336 (410)
T ss_pred             EEEEEccCCCCccccccHHHhhhcCcEEEEeCCCC---HHHHHHHHHHHHcCCCch
Confidence            7766432 22222344444444 999999987544   468999999999999865

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=6.4e-40  Score=311.48  Aligned_cols=306  Identities=24%  Similarity=0.351  Sum_probs=256.5

Q ss_pred             eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC---------CCCCcccccceeEEEEEeCC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT---------PLFPRIFGHEAAGVVESVGE   81 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~---------~~~p~~~G~e~~G~V~~~G~   81 (361)
                      |||++++++++ +++++.+.|++.++||+||+.++++|+.|+.++.|....         .++|.++|||++|+|+++|+
T Consensus         1 mka~~~~~~~~-~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~   79 (350)
T cd08256           1 MRAVVCHGPQD-YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGE   79 (350)
T ss_pred             CeeEEEecCCc-eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCC
Confidence            79999999887 999999999999999999999999999999988775311         14677899999999999999


Q ss_pred             CCC--CCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEecc
Q 018072           82 GVS--DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG  159 (361)
Q Consensus        82 ~v~--~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~  159 (361)
                      +++  .|++||+|+..+..+|+.|..|..++.+.|....+.   |..                 ....|+|+||+.++++
T Consensus        80 ~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~-----------------~~~~g~~~~~~~~~~~  139 (350)
T cd08256          80 GAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLY---GFQ-----------------NNVNGGMAEYMRFPKE  139 (350)
T ss_pred             CcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccce---eec-----------------cCCCCcceeeEEcccc
Confidence            998  899999999999999999999999999999754322   221                 0113589999999988


Q ss_pred             -ceEECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH
Q 018072          160 -CVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK  238 (361)
Q Consensus       160 -~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~  238 (361)
                       .++++|+++++++++.+ .++.|+|+++ +.+++++|++|+|.|+|.+|++++++|+++|+..|+++++++++.+++++
T Consensus       140 ~~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~  217 (350)
T cd08256         140 AIVHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARK  217 (350)
T ss_pred             cceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHH
Confidence             57899999999999988 7899999986 77899999999997789999999999999998778999999999999999


Q ss_pred             cCCCEEEcCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccE
Q 018072          239 FGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERT  317 (361)
Q Consensus       239 ~G~~~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~  317 (361)
                      +|++.+++....+  +.+.+..++++ ++|++||++|++..+..++++++++ |+++.+|.......+++......++++
T Consensus       218 ~g~~~v~~~~~~~--~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~  294 (350)
T cd08256         218 FGADVVLNPPEVD--VVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKL-GRFVEFSVFGDPVTVDWSIIGDRKELD  294 (350)
T ss_pred             cCCcEEecCCCcC--HHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEccCCCCCccChhHhhcccccE
Confidence            9999888876544  77777777776 8999999999767889999999998 999999875533333322221237888


Q ss_pred             EEEeeecCCCcCCcHHHHHHHHHcCCccc
Q 018072          318 LKGTFFGNYKPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       318 l~g~~~~~~~~~~~~~~~~~~~~~~~l~~  346 (361)
                      +.++....    ..+.+++++++++.++.
T Consensus       295 i~~~~~~~----~~~~~~~~~~~~g~l~~  319 (350)
T cd08256         295 VLGSHLGP----YCYPIAIDLIASGRLPT  319 (350)
T ss_pred             EEEeccCc----hhHHHHHHHHHcCCCCh
Confidence            88876443    46889999999998865

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=4.1e-41  Score=288.70  Aligned_cols=285  Identities=27%  Similarity=0.309  Sum_probs=246.2

Q ss_pred             ccccceeEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCC
Q 018072            6 GLILTCKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGV   83 (361)
Q Consensus         6 ~~~~~m~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v   83 (361)
                      +.|+..|-+++++.|..  +++++.|.|+|.++|++||-.++|+|..|..++.|.+...+.|++||-|++|+|+++|++|
T Consensus         4 ~~p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~gv   83 (336)
T KOG1197|consen    4 ASPPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEGV   83 (336)
T ss_pred             CCCchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecCCc
Confidence            45888999999998876  8999999999999999999999999999999999999878899999999999999999999


Q ss_pred             CCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEE
Q 018072           84 SDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAK  163 (361)
Q Consensus        84 ~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~  163 (361)
                      +++++||||+..-                                                 ..|.|+|++.+|...+++
T Consensus        84 tdrkvGDrVayl~-------------------------------------------------~~g~yaee~~vP~~kv~~  114 (336)
T KOG1197|consen   84 TDRKVGDRVAYLN-------------------------------------------------PFGAYAEEVTVPSVKVFK  114 (336)
T ss_pred             cccccccEEEEec-------------------------------------------------cchhhheeccccceeecc
Confidence            9999999998431                                                 125899999999999999


Q ss_pred             CCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC
Q 018072          164 INPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT  242 (361)
Q Consensus       164 iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~  242 (361)
                      +|+.+++.+||++.+-.+|||.-+++...+++|++||++.+ |++|+++.|+++..|+ .+|++.++++|++.+++.|++
T Consensus       115 vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~  193 (336)
T KOG1197|consen  115 VPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAE  193 (336)
T ss_pred             CCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCc
Confidence            99999999999998899999998888899999999999965 9999999999999999 999999999999999999999


Q ss_pred             EEEcCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCC-ceeecChhhhccccEEEE
Q 018072          243 DFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD-AVFMTKPINVLNERTLKG  320 (361)
Q Consensus       243 ~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~-~~~~~~~~~~~~~~~l~g  320 (361)
                      +.++++.+|  +.+.++.++++ |+|+++|.+|. +++...+.+|++. |.++.+|..++. ..++++.. --+.+++..
T Consensus       194 h~I~y~~eD--~v~~V~kiTngKGVd~vyDsvG~-dt~~~sl~~Lk~~-G~mVSfG~asgl~~p~~l~~l-s~k~l~lvr  268 (336)
T KOG1197|consen  194 HPIDYSTED--YVDEVKKITNGKGVDAVYDSVGK-DTFAKSLAALKPM-GKMVSFGNASGLIDPIPLNQL-SPKALQLVR  268 (336)
T ss_pred             ceeeccchh--HHHHHHhccCCCCceeeeccccc-hhhHHHHHHhccC-ceEEEeccccCCCCCeehhhc-Chhhhhhcc
Confidence            999999887  99999999988 99999999999 8999999999998 999999986632 22332211 115555433


Q ss_pred             -eeecCCCcCCcH----HHHHHHHHcCCcc
Q 018072          321 -TFFGNYKPRTDL----PSVVDMYMNKVIR  345 (361)
Q Consensus       321 -~~~~~~~~~~~~----~~~~~~~~~~~l~  345 (361)
                       +.+|....+.+|    .+++.++.++.|.
T Consensus       269 psl~gYi~g~~el~~~v~rl~alvnsg~lk  298 (336)
T KOG1197|consen  269 PSLLGYIDGEVELVSYVARLFALVNSGHLK  298 (336)
T ss_pred             HhhhcccCCHHHHHHHHHHHHHHhhcCccc
Confidence             334444444455    4667777777773

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=100.00  E-value=2.5e-39  Score=306.76  Aligned_cols=309  Identities=32%  Similarity=0.407  Sum_probs=260.7

Q ss_pred             eeEEEeecCCCCeEEEEeecCCC-CCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~G   89 (361)
                      |||+++.++++ +.+.+.|.|.| .++||+|||.++++|++|+..+.+..+..++|.++|||++|+|+++|++++.+++|
T Consensus         1 ~ka~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G   79 (347)
T cd05278           1 MKALVYLGPGK-IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPG   79 (347)
T ss_pred             CceEEEecCCc-eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccCCC
Confidence            68999999887 89999999999 89999999999999999999888876656778999999999999999999999999


Q ss_pred             CEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEecc--ceEECCCC
Q 018072           90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPL  167 (361)
Q Consensus        90 d~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~--~~~~iP~~  167 (361)
                      |+|+..+..+|+.|.+|..++..+|.+..+....|                   ....|+|++|++++.+  .++++|++
T Consensus        80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~g~~~~~~~v~~~~~~~~~lP~~  140 (347)
T cd05278          80 DRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLG-------------------NRIDGGQAEYVRVPYADMNLAKIPDG  140 (347)
T ss_pred             CEEEecCCCCCCCChhHhCcCcccCcCCCcccccc-------------------cCCCCeeeEEEEecchhCeEEECCCC
Confidence            99999999999999999999999998754331000                   1123589999999987  89999999


Q ss_pred             CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcC
Q 018072          168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  247 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~  247 (361)
                      ++.++++.+++++.|||+++ ...++++|++|||.|+|.+|++++|+|+.+|..+|+++++++++.++++++|++.++++
T Consensus       141 ~~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~  219 (347)
T cd05278         141 LPDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINP  219 (347)
T ss_pred             CCHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcC
Confidence            99999999999999999996 77889999999998889999999999999996578888889999999999999999887


Q ss_pred             CCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCC
Q 018072          248 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY  326 (361)
Q Consensus       248 ~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~  326 (361)
                      ...+  +.+.++.++++ ++|++||++++...+..++++|+++ |+++.+|..............+.+++++.++.... 
T Consensus       220 ~~~~--~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  295 (347)
T cd05278         220 KNGD--IVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG-GTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPV-  295 (347)
T ss_pred             Ccch--HHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcC-CEEEEEcCCCCCcccCccchhhhceeEEEeeccCc-
Confidence            7654  77778777765 8999999999866889999999998 99999986553322212222234788887765332 


Q ss_pred             CcCCcHHHHHHHHHcCCccc
Q 018072          327 KPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       327 ~~~~~~~~~~~~~~~~~l~~  346 (361)
                        .+.++++++++.++++..
T Consensus       296 --~~~~~~~~~~~~~~~l~~  313 (347)
T cd05278         296 --RARMPELLDLIEEGKIDP  313 (347)
T ss_pred             --hhHHHHHHHHHHcCCCCh
Confidence              467899999999998764

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=100.00  E-value=2.9e-39  Score=305.49  Aligned_cols=304  Identities=30%  Similarity=0.451  Sum_probs=260.9

Q ss_pred             eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCC---CCCCCcccccceeEEEEEeCCCCCCCC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESVGEGVSDLE   87 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~~G~~v~~~~   87 (361)
                      |||+++.+++.++.+.+.+.|.+++++++|||.++++|++|+..+.|..+   ...+|.++|||++|+|+++|+++..|+
T Consensus         1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~   80 (340)
T cd05284           1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLK   80 (340)
T ss_pred             CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCc
Confidence            79999998877799999999999999999999999999999998877553   245688999999999999999999999


Q ss_pred             CCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072           88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  167 (361)
Q Consensus        88 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~  167 (361)
                      +||+|+..+...|+.|..|..|..++|.+..+.   |+. .                  .|+|++|+.++.+.++++|++
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~------------------~g~~~~~~~v~~~~~~~~P~~  138 (340)
T cd05284          81 EGDPVVVHPPWGCGTCRYCRRGEENYCENARFP---GIG-T------------------DGGFAEYLLVPSRRLVKLPRG  138 (340)
T ss_pred             CCCEEEEcCCCCCCCChHHhCcCcccCCCCccc---Ccc-C------------------CCcceeeEEecHHHeEECCCC
Confidence            999999999999999999999999999988766   331 1                  248999999999999999999


Q ss_pred             CChhhhhccccchhhhhhhhhhh-cCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEc
Q 018072          168 APLDKVCILSCGVSTGLGATLNV-AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  246 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~~~-~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~  246 (361)
                      +++++++.+++.+.|||+++.+. ..+.+|++|||+|+|.+|++++|+|+.+|..+|+++++++++.+.++++|++++++
T Consensus       139 ls~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~  218 (340)
T cd05284         139 LDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLN  218 (340)
T ss_pred             CCHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHhCCcEEEc
Confidence            99999999999999999997665 46889999999999889999999999999338999999999999999999998887


Q ss_pred             CCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhh-hccccEEEEeeec
Q 018072          247 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFG  324 (361)
Q Consensus       247 ~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~l~g~~~~  324 (361)
                      +...   +.+.++.++.+ ++|+++|++|++.....++++|+++ |+++.+|....   .+++... +.+++++.++...
T Consensus       219 ~~~~---~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~---~~~~~~~~~~~~~~~~~~~~~  291 (340)
T cd05284         219 ASDD---VVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG-GRYVIVGYGGH---GRLPTSDLVPTEISVIGSLWG  291 (340)
T ss_pred             CCcc---HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEEcCCCC---CccCHHHhhhcceEEEEEecc
Confidence            6553   66677777766 8999999999877889999999998 99999997652   2233333 3489999887644


Q ss_pred             CCCcCCcHHHHHHHHHcCCccc
Q 018072          325 NYKPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~l~~  346 (361)
                      .   .+.+.+++++++++.+.+
T Consensus       292 ~---~~~~~~~~~~l~~g~l~~  310 (340)
T cd05284         292 T---RAELVEVVALAESGKVKV  310 (340)
T ss_pred             c---HHHHHHHHHHHHhCCCCc
Confidence            3   467899999999998753

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=100.00  E-value=3.5e-39  Score=306.36  Aligned_cols=307  Identities=28%  Similarity=0.426  Sum_probs=260.9

Q ss_pred             eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCC------------CCCCCcccccceeEEEEE
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ------------TPLFPRIFGHEAAGVVES   78 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~------------~~~~p~~~G~e~~G~V~~   78 (361)
                      |||+++..++.+++++++|.|++.++||+|||.++++|++|+..+.+..+            ...+|.++|||++|+|++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~   80 (350)
T cd08240           1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA   80 (350)
T ss_pred             CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence            79999998888799999999999999999999999999999998877543            123567899999999999


Q ss_pred             eCCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEec
Q 018072           79 VGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHS  158 (361)
Q Consensus        79 ~G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~  158 (361)
                      +|++++++++||+|+..+...|+.|..|.++++++|.+....   |.                   ...|+|++|+.++.
T Consensus        81 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~g~~~~~~~~~~  138 (350)
T cd08240          81 VGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRAL---GI-------------------FQDGGYAEYVIVPH  138 (350)
T ss_pred             eCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCce---ee-------------------eccCcceeeEEecH
Confidence            999999999999999999999999999999999999764332   21                   11258999999999


Q ss_pred             cceEECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH
Q 018072          159 GCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK  238 (361)
Q Consensus       159 ~~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~  238 (361)
                      +.++++|+++++.+++.+.+++.|||+++.+...++++++|+|+|+|++|++++|+|+.+|+++|+++++++++++.+++
T Consensus       139 ~~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~  218 (350)
T cd08240         139 SRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKA  218 (350)
T ss_pred             HHeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence            99999999999999999999999999998766667789999999889999999999999999789999999999999999


Q ss_pred             cCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEE
Q 018072          239 FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTL  318 (361)
Q Consensus       239 ~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l  318 (361)
                      +|++.+++....+  +.+.+..+..+++|++||++|.+..+..++++|+++ |+++.+|........+.... .++++++
T Consensus       219 ~g~~~~~~~~~~~--~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~-~~~~~~i  294 (350)
T cd08240         219 AGADVVVNGSDPD--AAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKG-GKLVLVGLFGGEATLPLPLL-PLRALTI  294 (350)
T ss_pred             hCCcEEecCCCcc--HHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcC-CeEEEECCCCCCCcccHHHH-hhcCcEE
Confidence            9998888765544  666676665558999999999778899999999998 99999987664433443322 3388899


Q ss_pred             EEeeecCCCcCCcHHHHHHHHHcCCccc
Q 018072          319 KGTFFGNYKPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       319 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~  346 (361)
                      .+++...   .+++.+++++++++.++.
T Consensus       295 ~~~~~~~---~~~~~~~~~ll~~~~i~~  319 (350)
T cd08240         295 QGSYVGS---LEELRELVALAKAGKLKP  319 (350)
T ss_pred             EEcccCC---HHHHHHHHHHHHcCCCcc
Confidence            8877554   367889999999998753

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=100.00  E-value=5.4e-39  Score=308.93  Aligned_cols=322  Identities=28%  Similarity=0.381  Sum_probs=259.8

Q ss_pred             eeEEEeecCCCCeEEEEeecCCCC-CCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPPQ-AMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~~-~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~G   89 (361)
                      |||+++.++++ ++++++|.|.|. +++|+||+.++++|++|+..+.|..+..++|.++|||++|+|+++|++++++++|
T Consensus         1 m~a~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G   79 (386)
T cd08283           1 MKALVWHGKGD-VRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVG   79 (386)
T ss_pred             CeeEEEecCCC-ceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Confidence            79999998866 999999999984 9999999999999999999998876656678999999999999999999999999


Q ss_pred             CEEeecCCCCCCCCccccCCCCCCCcccccCC----cccccccCCCcccccCCCccccccCcccceeeEEEecc--ceEE
Q 018072           90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINP----VRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAK  163 (361)
Q Consensus        90 d~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~----~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~--~~~~  163 (361)
                      |+|++.+..+|++|.+|+.+..+.|.+.....    .+|.. ..|..+++    ... ....|+|+||++++.+  .+++
T Consensus        80 d~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~-~~~~g~~~~~~~v~~~~~~~~~  153 (386)
T cd08283          80 DRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHA-GAGIFGYS----HLT-GGYAGGQAEYVRVPFADVGPFK  153 (386)
T ss_pred             CEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccc-cccccccc----ccc-CCCCCeeEEEEEcccccCeEEE
Confidence            99999999999999999999999998754321    11111 00000000    000 0113689999999988  8999


Q ss_pred             CCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCE
Q 018072          164 INPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD  243 (361)
Q Consensus       164 iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~  243 (361)
                      +|+++++++++.++.++.|||+++ +..++.+|++|+|+|+|++|++++++|++.|..+|+++++++++.+.+++++...
T Consensus       154 lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~  232 (386)
T cd08283         154 IPDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAE  232 (386)
T ss_pred             CCCCCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcE
Confidence            999999999999999999999997 7788999999999988999999999999999867999999999999999984446


Q ss_pred             EEcCCCCCccHHHHHHHHcCC-CccEEEEccCC---------------------hHHHHHHHHHhcCCCcEEEEEcCCCC
Q 018072          244 FVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN---------------------IDNMISAFECVHDGWGVAVLVGVPSK  301 (361)
Q Consensus       244 vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~---------------------~~~~~~~~~~l~~~~G~iv~~g~~~~  301 (361)
                      ++++...+ ++.+.+..++++ ++|++||++|+                     ...+..++++++++ |+++.+|....
T Consensus       233 vi~~~~~~-~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~g~~~~  310 (386)
T cd08283         233 TINFEEVD-DVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKG-GTVSIIGVYGG  310 (386)
T ss_pred             EEcCCcch-HHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccC-CEEEEEcCCCC
Confidence            67665532 267778777776 89999999975                     24678899999998 99999997653


Q ss_pred             CceeecChhh-hccccEEEEeeecCCCcCCcHHHHHHHHHcCCccc
Q 018072          302 DAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       302 ~~~~~~~~~~-~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l~~  346 (361)
                      . ...++... +.+++++.++...   ..+.++++++++++++++.
T Consensus       311 ~-~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~l~~g~l~~  352 (386)
T cd08283         311 T-VNKFPIGAAMNKGLTLRMGQTH---VQRYLPRLLELIESGELDP  352 (386)
T ss_pred             C-cCccCHHHHHhCCcEEEeccCC---chHHHHHHHHHHHcCCCCh
Confidence            2 23334322 3388998887532   2467889999999888764

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=100.00  E-value=1.7e-39  Score=303.19  Aligned_cols=273  Identities=18%  Similarity=0.256  Sum_probs=216.8

Q ss_pred             ceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecC-ccchhccccCCCC---CCCCcccccceeEEEEEeCCCCCC
Q 018072           10 TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLC-RTDLYFWESKGQT---PLFPRIFGHEAAGVVESVGEGVSD   85 (361)
Q Consensus        10 ~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~-~~D~~~~~g~~~~---~~~p~~~G~e~~G~V~~~G~~v~~   85 (361)
                      +|||+++.+++. +++++.|.|+|+++||+|||.++||| ++|++++.|..+.   ..+|.++|||++|+|+++|+++ +
T Consensus         1 ~~ka~~~~~~~~-l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~   78 (308)
T TIGR01202         1 KTQAIVLSGPNQ-IELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-G   78 (308)
T ss_pred             CceEEEEeCCCe-EEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-C
Confidence            589999998886 99999999999999999999999996 6999988886543   2579999999999999999998 6


Q ss_pred             CCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECC
Q 018072           86 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN  165 (361)
Q Consensus        86 ~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP  165 (361)
                      |++||||++.    |..|..|..               |   .                  .|+|+||+++|++.++++|
T Consensus        79 ~~vGdrV~~~----~~~c~~~~~---------------~---~------------------~G~~aey~~v~~~~~~~ip  118 (308)
T TIGR01202        79 FRPGDRVFVP----GSNCYEDVR---------------G---L------------------FGGASKRLVTPASRVCRLD  118 (308)
T ss_pred             CCCCCEEEEe----Ccccccccc---------------c---c------------------CCcccceEEcCHHHceeCC
Confidence            9999999873    223333210               1   0                  1489999999999999999


Q ss_pred             CCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEE
Q 018072          166 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV  245 (361)
Q Consensus       166 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv  245 (361)
                      ++++++. +.++ ++.|||+++.+ . ..++++|+|+|+|++|++++|+|+++|+..|++++.+++|++.+.++   .++
T Consensus       119 ~~~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i  191 (308)
T TIGR01202       119 PALGPQG-ALLA-LAATARHAVAG-A-EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVL  191 (308)
T ss_pred             CCCCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---ccc
Confidence            9998864 5554 57899998644 3 34689999999999999999999999996688888888888777653   334


Q ss_pred             cCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecC
Q 018072          246 NTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN  325 (361)
Q Consensus       246 ~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~  325 (361)
                      ++.+.           .+.++|+|||++|++..++.++++++++ |+++++|.......+++. ..++|++++.++..+.
T Consensus       192 ~~~~~-----------~~~g~Dvvid~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~-~~~~~~~~i~~~~~~~  258 (308)
T TIGR01202       192 DPEKD-----------PRRDYRAIYDASGDPSLIDTLVRRLAKG-GEIVLAGFYTEPVNFDFV-PAFMKEARLRIAAEWQ  258 (308)
T ss_pred             Chhhc-----------cCCCCCEEEECCCCHHHHHHHHHhhhcC-cEEEEEeecCCCcccccc-hhhhcceEEEEecccc
Confidence            33210           1237999999999988899999999998 999999986533333332 2234899998876443


Q ss_pred             CCcCCcHHHHHHHHHcCCcccC
Q 018072          326 YKPRTDLPSVVDMYMNKVIRFS  347 (361)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~l~~~  347 (361)
                         +++++++++++++++++++
T Consensus       259 ---~~~~~~~~~l~~~g~i~~~  277 (308)
T TIGR01202       259 ---PGDLHAVRELIESGALSLD  277 (308)
T ss_pred             ---hhHHHHHHHHHHcCCCChh
Confidence               4689999999999998653

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=100.00  E-value=6.1e-39  Score=309.42  Aligned_cols=312  Identities=19%  Similarity=0.224  Sum_probs=255.7

Q ss_pred             ccccceeEEEeec--CCC---CeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC----------CCCCccccc
Q 018072            6 GLILTCKAAVAWE--AGK---PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT----------PLFPRIFGH   70 (361)
Q Consensus         6 ~~~~~m~a~~~~~--~~~---~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~----------~~~p~~~G~   70 (361)
                      .+|.+|+|+++..  .+.   .++++++|.|.++++||+|||.++++|++|++.+.+....          ...+.++||
T Consensus         8 ~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~   87 (393)
T cd08246           8 VVPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGS   87 (393)
T ss_pred             cCchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCcccccc
Confidence            4789999999863  232   2789999999999999999999999999999887664110          112358999


Q ss_pred             ceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccc
Q 018072           71 EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTF  150 (361)
Q Consensus        71 e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~  150 (361)
                      |++|+|+++|++++.+++||+|++.+...|+.|..|..+..++|....+.   |+..                  ..|+|
T Consensus        88 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~---g~~~------------------~~g~~  146 (393)
T cd08246          88 DASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIW---GYET------------------NYGSF  146 (393)
T ss_pred             ceEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccc---cccC------------------CCCcc
Confidence            99999999999999999999999999999999999999999999865444   3211                  12589


Q ss_pred             eeeEEEeccceEECCCCCChhhhhccccchhhhhhhhhhh--cCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEc
Q 018072          151 SEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV--AKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD  227 (361)
Q Consensus       151 ae~v~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~--~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~  227 (361)
                      +||+.++.+.++++|+++++++++.+++++.|||+++...  +++++|++|+|+|+ |++|++++++|+++|+ ++++++
T Consensus       147 a~y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~vv~~~  225 (393)
T cd08246         147 AQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-NPVAVV  225 (393)
T ss_pred             eeEEEechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-eEEEEe
Confidence            9999999999999999999999999999999999997554  68899999999997 9999999999999999 777888


Q ss_pred             CChhhHHHHHHcCCCEEEcCCCCC--------------------ccHHHHHHHHcCC--CccEEEEccCChHHHHHHHHH
Q 018072          228 RSSKRFEEAKKFGVTDFVNTSEHD--------------------RPIQEVIAEMTNG--GVDRSVECTGNIDNMISAFEC  285 (361)
Q Consensus       228 ~~~~~~~~~~~~G~~~vv~~~~~~--------------------~~~~~~i~~~~~~--g~Dvvid~~g~~~~~~~~~~~  285 (361)
                      ++++++++++++|++.++++...+                    ..+.+.+.+++++  ++|++||++|+ ..+..++++
T Consensus       226 ~s~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~-~~~~~~~~~  304 (393)
T cd08246         226 SSEEKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGR-ATFPTSVFV  304 (393)
T ss_pred             CCHHHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCch-HhHHHHHHH
Confidence            999999999999999998864321                    0245667777765  79999999998 778999999


Q ss_pred             hcCCCcEEEEEcCCCCCceeecChhh-hccccEEEEeeecCCCcCCcHHHHHHHHHcCCcc
Q 018072          286 VHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIR  345 (361)
Q Consensus       286 l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l~  345 (361)
                      ++++ |+++.+|..... ...++... +.++.++.|++.+.   .+++.+++++++++.+.
T Consensus       305 l~~~-G~~v~~g~~~~~-~~~~~~~~l~~~~~~i~g~~~~~---~~~~~~~~~~~~~~~l~  360 (393)
T cd08246         305 CDRG-GMVVICAGTTGY-NHTYDNRYLWMRQKRIQGSHFAN---DREAAEANRLVMKGRID  360 (393)
T ss_pred             hccC-CEEEEEcccCCC-CCCCcHHHHhhheeEEEecccCc---HHHHHHHHHHHHcCCce
Confidence            9998 999999875422 12222232 34888898887554   35788999999998875

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=1.3e-38  Score=301.92  Aligned_cols=305  Identities=30%  Similarity=0.396  Sum_probs=258.6

Q ss_pred             eeEEEeecCCCCeEEEEeecCCC-CCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~G   89 (361)
                      |||+++.+++. +++++.|.|+| .++||+|||+++++|++|+.++.|..+...+|.++|||++|+|+++|++++.+++|
T Consensus         1 m~a~~~~~~~~-~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~G   79 (345)
T cd08286           1 MKALVYHGPGK-ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVG   79 (345)
T ss_pred             CceEEEecCCc-eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccCCC
Confidence            78999999887 99999999996 89999999999999999999988866555568899999999999999999999999


Q ss_pred             CEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEecc--ceEECCCC
Q 018072           90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPL  167 (361)
Q Consensus        90 d~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~--~~~~iP~~  167 (361)
                      |+|++.+...|++|.+|..++++.|....+.  .|         +          ...|+|++|+.++.+  .++++|++
T Consensus        80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---------~----------~~~g~~~~~~~v~~~~~~~~~lp~~  138 (345)
T cd08286          80 DRVLISCISSCGTCGYCRKGLYSHCESGGWI--LG---------N----------LIDGTQAEYVRIPHADNSLYKLPEG  138 (345)
T ss_pred             CEEEECCcCCCCCChHHHCcCcccCCCcccc--cc---------c----------ccCCeeeeEEEcccccCceEECCCC
Confidence            9999999999999999999999999754321  01         0          112489999999987  89999999


Q ss_pred             CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcC
Q 018072          168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  247 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~  247 (361)
                      ++..+++.++.++.+||+++....++.+|++|+|.|+|.+|++++|+|+.+|..+|+++++++++.+.++++|++.++++
T Consensus       139 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~  218 (345)
T cd08286         139 VDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNS  218 (345)
T ss_pred             CCHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceecc
Confidence            99999999999999999977778889999999999889999999999999994489999999999999999999999987


Q ss_pred             CCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeecC
Q 018072          248 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGN  325 (361)
Q Consensus       248 ~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~~  325 (361)
                      ...+  +.+.+..++.+ ++|++||++|....++.+++.|+++ |+++.+|.....  ..+++..++ +++++.+.... 
T Consensus       219 ~~~~--~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~-  292 (345)
T cd08286         219 AKGD--AIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPG-GHIANVGVHGKP--VDLHLEKLWIKNITITTGLVD-  292 (345)
T ss_pred             cccc--HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC-cEEEEecccCCC--CCcCHHHHhhcCcEEEeecCc-
Confidence            7654  66677777665 8999999999878899999999998 999999975432  334444434 89999875432 


Q ss_pred             CCcCCcHHHHHHHHHcCCccc
Q 018072          326 YKPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~l~~  346 (361)
                         .+.+++++++++++.++.
T Consensus       293 ---~~~~~~~~~~~~~~~l~~  310 (345)
T cd08286         293 ---TNTTPMLLKLVSSGKLDP  310 (345)
T ss_pred             ---hhhHHHHHHHHHcCCCCh
Confidence               256888889998887753

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.7e-38  Score=300.92  Aligned_cols=307  Identities=29%  Similarity=0.435  Sum_probs=262.5

Q ss_pred             eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   90 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd   90 (361)
                      |||+++.+++.++++++.|.|.+.++||+||+.++++|++|+..+.|..+...+|.++|+|++|+|+++|+++..+++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~Gd   80 (345)
T cd08260           1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGD   80 (345)
T ss_pred             CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCCCC
Confidence            79999998887799999999999999999999999999999998888665556688999999999999999999999999


Q ss_pred             EEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEecc--ceEECCCCC
Q 018072           91 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPLA  168 (361)
Q Consensus        91 ~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~--~~~~iP~~~  168 (361)
                      +|+..+..+|++|.+|..|..+.|.+....   |..                   ..|+|++|+.++..  .++++|+++
T Consensus        81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~~~v~~~~~~~~~iP~~~  138 (345)
T cd08260          81 RVTVPFVLGCGTCPYCRAGDSNVCEHQVQP---GFT-------------------HPGSFAEYVAVPRADVNLVRLPDDV  138 (345)
T ss_pred             EEEECCCCCCCCCccccCcCcccCCCCccc---ccC-------------------CCCcceeEEEcccccCceEECCCCC
Confidence            999888889999999999999999975322   111                   12489999999975  899999999


Q ss_pred             ChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCC
Q 018072          169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  248 (361)
Q Consensus       169 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~  248 (361)
                      +.++++.++.++.|||+++.+..++.++++|+|+|+|++|++++|+|+..|. +|+++.+++++.+.++++|++.++++.
T Consensus       139 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~  217 (345)
T cd08260         139 DFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNAS  217 (345)
T ss_pred             CHHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEccc
Confidence            9999999998999999998778889999999999999999999999999999 899999999999999999999999876


Q ss_pred             C-CCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCce-eecChhhh-ccccEEEEeeecC
Q 018072          249 E-HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV-FMTKPINV-LNERTLKGTFFGN  325 (361)
Q Consensus       249 ~-~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~-~~~~~~~~-~~~~~l~g~~~~~  325 (361)
                      . .+  +.+.+..+..+++|++||++|+...+..++++++++ |+++.+|....... ..++...+ .+++++.++....
T Consensus       218 ~~~~--~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (345)
T cd08260         218 EVED--VAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKR-GRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGMP  294 (345)
T ss_pred             cchh--HHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcC-CEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcCC
Confidence            5 33  666677666558999999999767889999999998 99999997653322 33443334 4888988876432


Q ss_pred             CCcCCcHHHHHHHHHcCCccc
Q 018072          326 YKPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~l~~  346 (361)
                         .+.+++++++++++++..
T Consensus       295 ---~~~~~~~~~l~~~~~i~~  312 (345)
T cd08260         295 ---AHRYDAMLALIASGKLDP  312 (345)
T ss_pred             ---HHHHHHHHHHHHcCCCCh
Confidence               468899999999888754

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>PLN02702 L-idonate 5-dehydrogenase

Probab=100.00  E-value=1.8e-38  Score=303.19  Aligned_cols=306  Identities=26%  Similarity=0.393  Sum_probs=247.3

Q ss_pred             cceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCC---CCCCCcccccceeEEEEEeCCCCCC
Q 018072            9 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESVGEGVSD   85 (361)
Q Consensus         9 ~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~~G~~v~~   85 (361)
                      ..|+++++..+.. +++++.+.|.|.++||+|||+++++|++|+..+.+...   ...+|.++|||++|+|+++|++++.
T Consensus        16 ~~~~~~~~~~~~~-l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   94 (364)
T PLN02702         16 EENMAAWLVGVNT-LKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKH   94 (364)
T ss_pred             cccceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCC
Confidence            4466666667765 89999999999999999999999999999998765321   1235789999999999999999999


Q ss_pred             CCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECC
Q 018072           86 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN  165 (361)
Q Consensus        86 ~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP  165 (361)
                      |++||+|++.+..+|+.|..|..|.++.|.+..+.   +..                  +..|+|+||++++.+.++++|
T Consensus        95 ~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~---~~~------------------~~~g~~~~y~~v~~~~~~~~P  153 (364)
T PLN02702         95 LVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFF---ATP------------------PVHGSLANQVVHPADLCFKLP  153 (364)
T ss_pred             CCCCCEEEEcCCCCCCCCcchhCcCcccCCCcccc---CCC------------------CCCCcccceEEcchHHeEECC
Confidence            99999999999999999999999999999864322   111                  012489999999999999999


Q ss_pred             CCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEE
Q 018072          166 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV  245 (361)
Q Consensus       166 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv  245 (361)
                      ++++++++++.. ++.++|+++ +..++.+|++|+|+|+|++|++++|+|+++|+..|++++++++|.++++++|++.++
T Consensus       154 ~~l~~~~aa~~~-~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~  231 (364)
T PLN02702        154 ENVSLEEGAMCE-PLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIV  231 (364)
T ss_pred             CCCCHHHHhhhh-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEE
Confidence            999998887632 455688875 778899999999999899999999999999997789999999999999999999887


Q ss_pred             cCCCCCccHHHHHHHH---cCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhh-hccccEEEEe
Q 018072          246 NTSEHDRPIQEVIAEM---TNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGT  321 (361)
Q Consensus       246 ~~~~~~~~~~~~i~~~---~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~l~g~  321 (361)
                      ++...+.++.+.+..+   ..+++|++||++|++..+..++++++++ |+++.+|.....  ..+.... .++++++.++
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~  308 (364)
T PLN02702        232 LVSTNIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG-GKVCLVGMGHNE--MTVPLTPAAAREVDVVGV  308 (364)
T ss_pred             ecCcccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCCC--CcccHHHHHhCccEEEEe
Confidence            7643222366666544   2348999999999778899999999998 999999965422  2222323 3488999887


Q ss_pred             eecCCCcCCcHHHHHHHHHcCCcc
Q 018072          322 FFGNYKPRTDLPSVVDMYMNKVIR  345 (361)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~l~  345 (361)
                      +..    ...++.+++++++++++
T Consensus       309 ~~~----~~~~~~~~~~~~~~~l~  328 (364)
T PLN02702        309 FRY----RNTWPLCLEFLRSGKID  328 (364)
T ss_pred             ccC----hHHHHHHHHHHHcCCCC
Confidence            642    25788899999998875

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=100.00  E-value=2.4e-39  Score=298.23  Aligned_cols=256  Identities=28%  Similarity=0.429  Sum_probs=211.1

Q ss_pred             ccccceeEEEEEeCCCCC------CCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCc
Q 018072           67 IFGHEAAGVVESVGEGVS------DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEP  140 (361)
Q Consensus        67 ~~G~e~~G~V~~~G~~v~------~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~  140 (361)
                      ++|||++|+|+++|++|+      ++++||||++.+..+|+.|++|+.++++.|.+....   |.....+  ++      
T Consensus         1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~---g~~~~~~--~~------   69 (280)
T TIGR03366         1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKY---GHEALDS--GW------   69 (280)
T ss_pred             CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhc---CcccccC--Cc------
Confidence            589999999999999999      899999999999999999999999999999886544   3210000  00      


Q ss_pred             cccccCcccceeeEEEecc-ceEECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC
Q 018072          141 VNHFLGTSTFSEYTVVHSG-CVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAG  219 (361)
Q Consensus       141 ~~~~~~~G~~ae~v~v~~~-~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g  219 (361)
                          ...|+|+||+++|++ .++++|+++++++++.+++++.|+|+++ +.....+|++|||+|+|++|++++|+|+++|
T Consensus        70 ----~~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G  144 (280)
T TIGR03366        70 ----PLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAAL-EAAGDLKGRRVLVVGAGMLGLTAAAAAAAAG  144 (280)
T ss_pred             ----cccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHH-HhccCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence                112589999999997 7999999999999999998999999986 4456679999999999999999999999999


Q ss_pred             CCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcC
Q 018072          220 ASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       220 ~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      +.+|++++++++|+++++++|++.+++...    ..+.+..++.+ ++|++||++|++..+..++++++++ |+++.+|.
T Consensus       145 ~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~----~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~-G~iv~~G~  219 (280)
T TIGR03366       145 AARVVAADPSPDRRELALSFGATALAEPEV----LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG-GTAVLAGS  219 (280)
T ss_pred             CCEEEEECCCHHHHHHHHHcCCcEecCchh----hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEecc
Confidence            966999999999999999999998887643    33455666665 8999999999988899999999998 99999997


Q ss_pred             CCCCceeecChhhhc-cccEEEEeeecCCCcCCcHHHHHHHHHcC--Cccc
Q 018072          299 PSKDAVFMTKPINVL-NERTLKGTFFGNYKPRTDLPSVVDMYMNK--VIRF  346 (361)
Q Consensus       299 ~~~~~~~~~~~~~~~-~~~~l~g~~~~~~~~~~~~~~~~~~~~~~--~l~~  346 (361)
                      ........+++..++ |++++.|+..+.   +++++++++++.++  ++++
T Consensus       220 ~~~~~~~~i~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~l~~~~~~~~~  267 (280)
T TIGR03366       220 VFPGGPVALDPEQVVRRWLTIRGVHNYE---PRHLDQAVRFLAANGQRFPF  267 (280)
T ss_pred             CCCCCceeeCHHHHHhCCcEEEecCCCC---HHHHHHHHHHHHhhCCCCCH
Confidence            643233444455444 999999987543   46899999999974  4544

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.8e-38  Score=301.22  Aligned_cols=328  Identities=32%  Similarity=0.518  Sum_probs=263.6

Q ss_pred             eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCC---CC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSD---LE   87 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~---~~   87 (361)
                      |||+++.+++.++.+++.|.|.++++||+|||.++++|++|+.++.+..+. .+|.++|||++|+|+++|+++..   |+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~-~~p~~~g~e~~G~v~~vG~~~~~~~~~~   79 (367)
T cd08263           1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF-PPPFVLGHEISGEVVEVGPNVENPYGLS   79 (367)
T ss_pred             CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC-CCCcccccccceEEEEeCCCCCCCCcCC
Confidence            789999998777899999999999999999999999999999988775543 56889999999999999999988   99


Q ss_pred             CCCEEeecCCCCCCCCccccCCCCCCCccccc-CCcccccccCCCcccc-cCCCccccccCcccceeeEEEeccceEECC
Q 018072           88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI-NPVRGVMLADGQSRFS-INGEPVNHFLGTSTFSEYTVVHSGCVAKIN  165 (361)
Q Consensus        88 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~-~~~~G~~~~~g~~~~~-~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP  165 (361)
                      +||+|+..+..+|+.|.+|..+..++|.+..+ ++..|.. .+|-..+. -.+.++.. ...|+|++|+.++.+.++++|
T Consensus        80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~P  157 (367)
T cd08263          80 VGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTL-YDGTTRLFRLDGGPVYM-YSMGGLAEYAVVPATALAPLP  157 (367)
T ss_pred             CCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccc-cCCcccccccCCCcccc-ccCCcceeEEEechhhEEECC
Confidence            99999999999999999999999999997542 1111100 11100000 00000000 123689999999999999999


Q ss_pred             CCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEE
Q 018072          166 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV  245 (361)
Q Consensus       166 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv  245 (361)
                      +++++.+++.+++++.|||+++.+...+.++++|+|+|+|++|++++++|+..|+..|++++.++++.+.++++|++.++
T Consensus       158 ~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~  237 (367)
T cd08263         158 ESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTV  237 (367)
T ss_pred             CCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEe
Confidence            99999999999999999999987878889999999998899999999999999995599998999999999999999999


Q ss_pred             cCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh-ccccEEEEeee
Q 018072          246 NTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFF  323 (361)
Q Consensus       246 ~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~  323 (361)
                      +....+  +.+.++.+.++ ++|++||++++.+.+..++++++++ |+++.+|.........++...+ .+++++.++..
T Consensus       238 ~~~~~~--~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  314 (367)
T cd08263         238 NAAKED--AVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG-GRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYG  314 (367)
T ss_pred             cCCccc--HHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcC-CEEEEEccCCCCCccccCHHHHhhCCeEEEecCC
Confidence            877654  77777777655 8999999999955889999999998 9999998765332334444445 38888887542


Q ss_pred             cCCCcCCcHHHHHHHHHcCCccc
Q 018072          324 GNYKPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~l~~  346 (361)
                      ..  ..+.+++++++++++++..
T Consensus       315 ~~--~~~~~~~~~~ll~~~~l~~  335 (367)
T cd08263         315 AR--PRQDLPELVGLAASGKLDP  335 (367)
T ss_pred             CC--cHHHHHHHHHHHHcCCCCc
Confidence            22  2357889999999988754

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=7.6e-38  Score=291.90  Aligned_cols=300  Identities=27%  Similarity=0.456  Sum_probs=250.9

Q ss_pred             eeEEEeecCCC-CeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018072           11 CKAAVAWEAGK-PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (361)
Q Consensus        11 m~a~~~~~~~~-~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~G   89 (361)
                      |||+++.+++. .+++++++.|++.++||+|||.++++|++|...+.+.......|.++|+|++|+|+++|++++.|++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G   80 (306)
T cd08258           1 MKALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVG   80 (306)
T ss_pred             CeeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCCC
Confidence            68999987652 49999999999999999999999999999998877755334457899999999999999999999999


Q ss_pred             CEEeecCC-CCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCC
Q 018072           90 DHVLPVFT-GECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA  168 (361)
Q Consensus        90 d~V~~~~~-~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~  168 (361)
                      |+|+..+. .+|+.|.+|..+..+.|...+..   |.                   ...|+|++|++++.+.++++|+++
T Consensus        81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~g~~~~~~~v~~~~~~~lp~~~  138 (306)
T cd08258          81 DRVVSETTFSTCGRCPYCRRGDYNLCPHRKGI---GT-------------------QADGGFAEYVLVPEESLHELPENL  138 (306)
T ss_pred             CEEEEccCcCCCCCCcchhCcCcccCCCCcee---ee-------------------cCCCceEEEEEcchHHeEECcCCC
Confidence            99998774 68999999999999999864322   11                   112589999999999999999999


Q ss_pred             ChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEE--cCChhhHHHHHHcCCCEEEc
Q 018072          169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGV--DRSSKRFEEAKKFGVTDFVN  246 (361)
Q Consensus       169 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~--~~~~~~~~~~~~~G~~~vv~  246 (361)
                      ++++++ +..++.++|+++....+++++++|+|.|+|.+|++++|+|+.+|+ +|+.+  ++++++.++++++|++++ +
T Consensus       139 ~~~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~-~v~~~~~~~~~~~~~~~~~~g~~~~-~  215 (306)
T cd08258         139 SLEAAA-LTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGA-TVVVVGTEKDEVRLDVAKELGADAV-N  215 (306)
T ss_pred             CHHHHH-hhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEECCCCCHHHHHHHHHhCCccc-C
Confidence            999887 566888999998888899999999998889999999999999999 67776  345668888899999877 7


Q ss_pred             CCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh-ccccEEEEeeec
Q 018072          247 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFG  324 (361)
Q Consensus       247 ~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~  324 (361)
                      +...+  +.+.+..+..+ ++|++||++|+...+..++++|+++ |+++.+|... .....++...+ +++++|.|++++
T Consensus       216 ~~~~~--~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~i~g~~~~  291 (306)
T cd08258         216 GGEED--LAELVNEITDGDGADVVIECSGAVPALEQALELLRKG-GRIVQVGIFG-PLAASIDVERIIQKELSVIGSRSS  291 (306)
T ss_pred             CCcCC--HHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccC-CCCcccCHHHHhhcCcEEEEEecC
Confidence            65554  77777777765 8999999998778889999999998 9999999865 22233333334 499999999987


Q ss_pred             CCCcCCcHHHHHHHHHcC
Q 018072          325 NYKPRTDLPSVVDMYMNK  342 (361)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~  342 (361)
                      +   +++++++++++++|
T Consensus       292 ~---~~~~~~~~~~~~~~  306 (306)
T cd08258         292 T---PASWETALRLLASG  306 (306)
T ss_pred             c---hHhHHHHHHHHhcC
Confidence            6   47899999999875

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=100.00  E-value=1.1e-37  Score=295.07  Aligned_cols=307  Identities=28%  Similarity=0.389  Sum_probs=252.3

Q ss_pred             eeEEEeecCCCCeEEEEeecCCCC-CCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPPQ-AMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~~-~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~G   89 (361)
                      |||+++..++. +++++++.|.|. ++||+|||.++++|+.|+....|..+ ...|.++|+|++|+|+++|++++.+++|
T Consensus         1 ~~a~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~G   78 (344)
T cd08284           1 MKAVVFKGPGD-VRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP-STPGFVLGHEFVGEVVEVGPEVRTLKVG   78 (344)
T ss_pred             CeeEEEecCCC-ceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC-CCCCcccccceEEEEEeeCCCccccCCC
Confidence            78999988765 999999999985 99999999999999999988877544 3457889999999999999999999999


Q ss_pred             CEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEecc--ceEECCCC
Q 018072           90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPL  167 (361)
Q Consensus        90 d~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~--~~~~iP~~  167 (361)
                      |+|+..+..+|+.|.+|.+++.+.|.+....   |..   +            .....|+|++|+.++.+  .++++|++
T Consensus        79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~------------~~~~~g~~~~~~~v~~~~~~~~~~p~~  140 (344)
T cd08284          79 DRVVSPFTIACGECFYCRRGQSGRCAKGGLF---GYA---G------------SPNLDGAQAEYVRVPFADGTLLKLPDG  140 (344)
T ss_pred             CEEEEcccCCCCCChHHhCcCcccCCCCccc---ccc---c------------cCCCCCceeEEEEcccccCceEECCCC
Confidence            9999999999999999999999999764222   110   0            00113589999999865  99999999


Q ss_pred             CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcC
Q 018072          168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  247 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~  247 (361)
                      +++++++.++.++.|||+++. ...+.+|++|+|+|+|.+|++++|+|+.+|..+|+++++++++.++++++|+. .++.
T Consensus       141 l~~~~a~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~  218 (344)
T cd08284         141 LSDEAALLLGDILPTGYFGAK-RAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINF  218 (344)
T ss_pred             CCHHHhhhhcCchHHHHhhhH-hcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEec
Confidence            999999999999999999974 47889999999998899999999999999975799998899999999999985 4555


Q ss_pred             CCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhh-hccccEEEEeeecC
Q 018072          248 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGN  325 (361)
Q Consensus       248 ~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~l~g~~~~~  325 (361)
                      ...+  +.+.+..++++ ++|++||+++++..+..++++++++ |+++.+|..... ........ +.+++++.+..   
T Consensus       219 ~~~~--~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~---  291 (344)
T cd08284         219 EDAE--PVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPG-GVISSVGVHTAE-EFPFPGLDAYNKNLTLRFGR---  291 (344)
T ss_pred             CCcC--HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccC-CEEEEECcCCCC-CccccHHHHhhcCcEEEEec---
Confidence            4433  77778777765 8999999999878899999999998 999999976522 22222333 34888887553   


Q ss_pred             CCcCCcHHHHHHHHHcCCccc
Q 018072          326 YKPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~l~~  346 (361)
                      ....+.++++++++.++++++
T Consensus       292 ~~~~~~~~~~~~~~~~~~i~~  312 (344)
T cd08284         292 CPVRSLFPELLPLLESGRLDL  312 (344)
T ss_pred             CCcchhHHHHHHHHHcCCCCh
Confidence            223578999999999988753

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=100.00  E-value=8.3e-38  Score=301.96  Aligned_cols=311  Identities=20%  Similarity=0.248  Sum_probs=252.6

Q ss_pred             cccceeEEEeec--CCCC---eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCC----------CCCCC-ccccc
Q 018072            7 LILTCKAAVAWE--AGKP---LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ----------TPLFP-RIFGH   70 (361)
Q Consensus         7 ~~~~m~a~~~~~--~~~~---~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~----------~~~~p-~~~G~   70 (361)
                      +|.+|||+++..  .+++   +++++.|.|.|.++|++||++++++|++|++...+...          ....| .++||
T Consensus         4 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~   83 (398)
T TIGR01751         4 VPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGS   83 (398)
T ss_pred             cchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceeccc
Confidence            578899999964  4543   89999999999999999999999999999876544210          01223 37999


Q ss_pred             ceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccc
Q 018072           71 EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTF  150 (361)
Q Consensus        71 e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~  150 (361)
                      |++|+|+++|++++.+++||+|++.+...|++|.+|+.++.+.|....+.   |..                  ...|+|
T Consensus        84 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~------------------~~~g~~  142 (398)
T TIGR01751        84 DASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIW---GYE------------------TNFGSF  142 (398)
T ss_pred             ceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccc---ccc------------------CCCccc
Confidence            99999999999999999999999999999999999999999999764332   211                  113589


Q ss_pred             eeeEEEeccceEECCCCCChhhhhccccchhhhhhhhhh--hcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEc
Q 018072          151 SEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN--VAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD  227 (361)
Q Consensus       151 ae~v~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~--~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~  227 (361)
                      +||++++.+.++++|+++++++++.+.+++.|||+++..  ..++++|++|+|+|+ |++|++++|+|+++|+ ++++++
T Consensus       143 ae~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~vi~~~  221 (398)
T TIGR01751       143 AEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-NPVAVV  221 (398)
T ss_pred             eEEEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-eEEEEc
Confidence            999999999999999999999999999999999998754  477899999999998 9999999999999999 778888


Q ss_pred             CChhhHHHHHHcCCCEEEcCCCCC--------------------ccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHh
Q 018072          228 RSSKRFEEAKKFGVTDFVNTSEHD--------------------RPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECV  286 (361)
Q Consensus       228 ~~~~~~~~~~~~G~~~vv~~~~~~--------------------~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l  286 (361)
                      +++++.+.++++|++.++++++.+                    ..+.+.+.+++++ ++|++||++|. ..+..+++++
T Consensus       222 ~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~-~~~~~~~~~l  300 (398)
T TIGR01751       222 SSPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGR-ATFPTSVFVC  300 (398)
T ss_pred             CCHHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcH-HHHHHHHHhh
Confidence            889999999999999999875421                    1244566667765 89999999997 7788999999


Q ss_pred             cCCCcEEEEEcCCCCCceeecChhh-hccccEEEEeeecCCCcCCcHHHHHHHHHcCCcc
Q 018072          287 HDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIR  345 (361)
Q Consensus       287 ~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l~  345 (361)
                      +++ |+++.+|..... ...++... +.++.++.++..+..   .++++++++++++++.
T Consensus       301 ~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~l~  355 (398)
T TIGR01751       301 RRG-GMVVICGGTTGY-NHDYDNRYLWMRQKRIQGSHFANL---REAWEANRLVAKGRID  355 (398)
T ss_pred             ccC-CEEEEEccccCC-CCCcCHHHHhhcccEEEccccCcH---HHHHHHHHHHHCCCcc
Confidence            998 999999976532 12222332 347888888765543   4578888999888775

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=100.00  E-value=1.4e-37  Score=298.18  Aligned_cols=314  Identities=26%  Similarity=0.362  Sum_probs=250.9

Q ss_pred             eeEEEeecCCCCeEEEEeecCCC-CCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~G   89 (361)
                      ||++++.+++. ++++++|+|.+ .++|++|||.++++|++|++.+.|..+ ..+|.++|||++|+|+++|++++.+++|
T Consensus         1 m~~~~~~~~~~-~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~~G   78 (375)
T cd08282           1 MKAVVYGGPGN-VAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG-AEPGLVLGHEAMGEVEEVGSAVESLKVG   78 (375)
T ss_pred             CceEEEecCCc-eeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-CCCCceeccccEEEEEEeCCCCCcCCCC
Confidence            68999988875 99999999996 799999999999999999999887655 4568899999999999999999999999


Q ss_pred             CEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEecc--ceEECCCC
Q 018072           90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPL  167 (361)
Q Consensus        90 d~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~--~~~~iP~~  167 (361)
                      |+|+..+..+|+.|..|..++.+.|.+..+.       .++ ..|...    ......|+|+||+++|.+  .++++|++
T Consensus        79 d~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~-------~~~-~~~~~~----~~~~~~g~~a~y~~v~~~~~~~~~lP~~  146 (375)
T cd08282          79 DRVVVPFNVACGRCRNCKRGLTGVCLTVNPG-------RAG-GAYGYV----DMGPYGGGQAEYLRVPYADFNLLKLPDR  146 (375)
T ss_pred             CEEEEeCCCCCCCCHHHHCcCcccCCCCCcc-------ccc-cccccc----ccCCCCCeeeeEEEeecccCcEEECCCC
Confidence            9999999999999999999999999763222       000 000000    001113589999999976  89999999


Q ss_pred             CChh---hhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEE
Q 018072          168 APLD---KVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF  244 (361)
Q Consensus       168 ~~~~---~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~v  244 (361)
                      ++++   +++.+..++.|||+++ ..+++++|++|+|.|+|++|++++|+|+++|+.+|++++++++|+++++++|+ ..
T Consensus       147 ~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~-~~  224 (375)
T cd08282         147 DGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGA-IP  224 (375)
T ss_pred             CChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC-eE
Confidence            9998   5677888899999997 78899999999999889999999999999998678889999999999999998 45


Q ss_pred             EcCCCCCccHHHHHHHHcCCCccEEEEccCChH-----------HHHHHHHHhcCCCcEEEEEcCCCCCc----------
Q 018072          245 VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID-----------NMISAFECVHDGWGVAVLVGVPSKDA----------  303 (361)
Q Consensus       245 v~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~-----------~~~~~~~~l~~~~G~iv~~g~~~~~~----------  303 (361)
                      +++.+.+  +.+.+..++++++|+++|++|++.           .+..++++++++ |+++.+|......          
T Consensus       225 v~~~~~~--~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~g~~~~~~~~~~~~~~~~  301 (375)
T cd08282         225 IDFSDGD--PVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPG-GGIGIVGVYVAEDPGAGDAAAKQ  301 (375)
T ss_pred             eccCccc--HHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcC-cEEEEEeccCCcccccccccccC
Confidence            5555433  667777776667999999999852           488999999998 9999888653210          


Q ss_pred             -eeecChhhhc-cccEEEEeeecCCCcCCcHHHHHHHHHcCCccc
Q 018072          304 -VFMTKPINVL-NERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       304 -~~~~~~~~~~-~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l~~  346 (361)
                       ...++...+. ++..+.+....   .++.++.++++++++++++
T Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~l~~  343 (375)
T cd08282         302 GELSFDFGLLWAKGLSFGTGQAP---VKKYNRQLRDLILAGRAKP  343 (375)
T ss_pred             ccccccHHHHHhcCcEEEEecCC---chhhHHHHHHHHHcCCCCh
Confidence             1222333333 67777765432   2467889999999998864

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=100.00  E-value=1.1e-37  Score=294.60  Aligned_cols=303  Identities=25%  Similarity=0.395  Sum_probs=250.1

Q ss_pred             eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   90 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd   90 (361)
                      |||+++.++++...+++.|.|.|.++||+|||+++++|++|+..+.+..+. ..|.++|||++|+|+++|+++..|++||
T Consensus         1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~~G~~v~~~~~Gd   79 (338)
T PRK09422          1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD-KTGRILGHEGIGIVKEVGPGVTSLKVGD   79 (338)
T ss_pred             CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC-CCCccCCcccceEEEEECCCCccCCCCC
Confidence            899999998874338999999999999999999999999999888775432 3477899999999999999999999999


Q ss_pred             EEeecC-CCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCC
Q 018072           91 HVLPVF-TGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP  169 (361)
Q Consensus        91 ~V~~~~-~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~  169 (361)
                      +|++.+ ..+|+.|..|..+..+.|.+....   |..                   ..|+|+||+.++.+.++++|++++
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~~~v~~~~~~~~p~~~~  137 (338)
T PRK09422         80 RVSIAWFFEGCGHCEYCTTGRETLCRSVKNA---GYT-------------------VDGGMAEQCIVTADYAVKVPEGLD  137 (338)
T ss_pred             EEEEccCCCCCCCChhhcCCCcccCCCcccc---Ccc-------------------ccCcceeEEEEchHHeEeCCCCCC
Confidence            998654 458999999999999999876533   221                   124899999999999999999999


Q ss_pred             hhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHHcCCCEEEcCC
Q 018072          170 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFVNTS  248 (361)
Q Consensus       170 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~-g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~  248 (361)
                      +.+++.++.++.|||+++ ..+.+++|++|||+|+|++|++++|+|+.. |+ +|+++++++++++.++++|++.++++.
T Consensus       138 ~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~  215 (338)
T PRK09422        138 PAQASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSK  215 (338)
T ss_pred             HHHeehhhcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEeccc
Confidence            999999999999999996 778899999999999999999999999984 98 899999999999999999999988875


Q ss_pred             CCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCCCc
Q 018072          249 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP  328 (361)
Q Consensus       249 ~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~  328 (361)
                      ..+ ++.+.++...+ ++|+++++.++...++.++++++++ |+++.+|.......++.. ....++.++.+++.+.   
T Consensus       216 ~~~-~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~---  288 (338)
T PRK09422        216 RVE-DVAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAG-GRVVAVGLPPESMDLSIP-RLVLDGIEVVGSLVGT---  288 (338)
T ss_pred             ccc-cHHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCC-CEEEEEeeCCCCceecHH-HHhhcCcEEEEecCCC---
Confidence            422 25666776665 6885555555668899999999998 999999875433232221 2233788888766433   


Q ss_pred             CCcHHHHHHHHHcCCcc
Q 018072          329 RTDLPSVVDMYMNKVIR  345 (361)
Q Consensus       329 ~~~~~~~~~~~~~~~l~  345 (361)
                      +++++++++++++++++
T Consensus       289 ~~~~~~~~~l~~~g~l~  305 (338)
T PRK09422        289 RQDLEEAFQFGAEGKVV  305 (338)
T ss_pred             HHHHHHHHHHHHhCCCC
Confidence            46789999999998874

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=100.00  E-value=1.7e-37  Score=293.70  Aligned_cols=301  Identities=28%  Similarity=0.413  Sum_probs=247.8

Q ss_pred             eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCC---CCCCCCcccccceeEEEEEeCCCCCCCC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG---QTPLFPRIFGHEAAGVVESVGEGVSDLE   87 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~V~~~G~~v~~~~   87 (361)
                      ||++++.++++.+++.+.|.|.|.++||+||++++++|++|+.++.+..   ....+|.++|||++|+|+++|++++.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~   80 (341)
T PRK05396          1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK   80 (341)
T ss_pred             CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCC
Confidence            7899999988779999999999999999999999999999998766531   1234678999999999999999999999


Q ss_pred             CCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072           88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  167 (361)
Q Consensus        88 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~  167 (361)
                      +||+|+..++++|+.|..|+.++.++|.+..+.   |                   ....|+|++|+.++.+.++++|++
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-------------------~~~~g~~~~~~~v~~~~~~~iP~~  138 (341)
T PRK05396         81 VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGV---G-------------------VNRPGAFAEYLVIPAFNVWKIPDD  138 (341)
T ss_pred             CCCEEEECCCCCCCCChhhhCcChhhCCCccee---e-------------------ecCCCcceeeEEechHHeEECcCC
Confidence            999999999999999999999999999764322   1                   111248999999999999999999


Q ss_pred             CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcC
Q 018072          168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  247 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~  247 (361)
                      +++++++.+ .++.++++++..  ...+|++|+|.|+|.+|++++|+|+.+|+++|+++++++++.++++++|+++++++
T Consensus       139 l~~~~~~~~-~~~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~  215 (341)
T PRK05396        139 IPDDLAAIF-DPFGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNV  215 (341)
T ss_pred             CCHHHhHhh-hHHHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecC
Confidence            999888755 466677665433  34689999999889999999999999998678888889999999999999999887


Q ss_pred             CCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCC
Q 018072          248 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY  326 (361)
Q Consensus       248 ~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~  326 (361)
                      ...+  +.+.++.++.+ ++|++||++|+...+..++++++++ |+++.+|.......+.+ ....++++++.++.....
T Consensus       216 ~~~~--~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~l~~~~~~~~  291 (341)
T PRK05396        216 AKED--LRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG-GRIAMLGIPPGDMAIDW-NKVIFKGLTIKGIYGREM  291 (341)
T ss_pred             cccc--HHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCCCcccH-HHHhhcceEEEEEEccCc
Confidence            7655  77788877765 8999999999878899999999998 99999997653333332 233348888888753222


Q ss_pred             CcCCcHHHHHHHHHcC
Q 018072          327 KPRTDLPSVVDMYMNK  342 (361)
Q Consensus       327 ~~~~~~~~~~~~~~~~  342 (361)
                        .+.+..+++++.++
T Consensus       292 --~~~~~~~~~~~~~~  305 (341)
T PRK05396        292 --FETWYKMSALLQSG  305 (341)
T ss_pred             --cchHHHHHHHHHcC
Confidence              34566778888877

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=1.9e-37  Score=293.70  Aligned_cols=303  Identities=29%  Similarity=0.401  Sum_probs=251.7

Q ss_pred             eeEEEeecCCCCeEEEEeecCCC-CCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~G   89 (361)
                      |||+++.++++ +++++.|.|.| +++||+||+.++++|++|+..+.|..+ ...|.++|||++|+|+++|+++..+++|
T Consensus         1 m~~~~~~~~~~-~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~G   78 (345)
T cd08287           1 MRATVIHGPGD-IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSP-TRAPAPIGHEFVGVVEEVGSEVTSVKPG   78 (345)
T ss_pred             CceeEEecCCc-eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCC-CCCCcccccceEEEEEEeCCCCCccCCC
Confidence            78999998886 99999999996 899999999999999999988877554 3457899999999999999999999999


Q ss_pred             CEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEecc--ceEECCCC
Q 018072           90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPL  167 (361)
Q Consensus        90 d~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~--~~~~iP~~  167 (361)
                      |+|++.+..+|+.|..|..++.++|.+..+.   |..                   ..|+|+||+.++.+  .++++|++
T Consensus        79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~~~v~~~~~~~~~lP~~  136 (345)
T cd08287          79 DFVIAPFAISDGTCPFCRAGFTTSCVHGGFW---GAF-------------------VDGGQGEYVRVPLADGTLVKVPGS  136 (345)
T ss_pred             CEEEeccccCCCCChhhhCcCcccCCCCCcc---cCC-------------------CCCceEEEEEcchhhCceEECCCC
Confidence            9999877788999999999999999865433   211                   12489999999975  99999999


Q ss_pred             CChhhhh-----ccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC
Q 018072          168 APLDKVC-----ILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT  242 (361)
Q Consensus       168 ~~~~~aa-----~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~  242 (361)
                      ++++.+.     .+...+.+||+++ +.+.+++|++|+|.|+|++|++++|+|+++|++.++++++++++.+.++++|++
T Consensus       137 l~~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~  215 (345)
T cd08287         137 PSDDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGAT  215 (345)
T ss_pred             CChhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCc
Confidence            9872221     1225678899986 578899999999998899999999999999996699999999999999999999


Q ss_pred             EEEcCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecCh-hhhccccEEEE
Q 018072          243 DFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKG  320 (361)
Q Consensus       243 ~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~~~~~~l~g  320 (361)
                      .++++...+  +.+.+..++++ ++|+++|++|++..+..++++++++ |+++.+|....  ...++. ..+.+++++.+
T Consensus       216 ~v~~~~~~~--~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~--~~~~~~~~~~~~~~~~~~  290 (345)
T cd08287         216 DIVAERGEE--AVARVRELTGGVGADAVLECVGTQESMEQAIAIARPG-GRVGYVGVPHG--GVELDVRELFFRNVGLAG  290 (345)
T ss_pred             eEecCCccc--HHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccC-CEEEEecccCC--CCccCHHHHHhcceEEEE
Confidence            999887654  77778777766 8999999999878999999999998 99999987653  233444 33448999987


Q ss_pred             eeecCCCcCCcHHHHHHHHHcCCccc
Q 018072          321 TFFGNYKPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~l~~  346 (361)
                      .....   .+.++++++++.+++++.
T Consensus       291 ~~~~~---~~~~~~~~~~~~~~~l~~  313 (345)
T cd08287         291 GPAPV---RRYLPELLDDVLAGRINP  313 (345)
T ss_pred             ecCCc---HHHHHHHHHHHHcCCCCH
Confidence            54322   467899999999998753

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.8e-37  Score=290.84  Aligned_cols=301  Identities=33%  Similarity=0.528  Sum_probs=255.1

Q ss_pred             eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   90 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd   90 (361)
                      |||+++.+++. +.+.++|.|.++++|++|||.++++|+.|+....+..+...+|.++|+|++|+|+++|++++.+++||
T Consensus         1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd   79 (337)
T cd08261           1 MKALVCEKPGR-LEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKVGD   79 (337)
T ss_pred             CeEEEEeCCCc-eEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCCCC
Confidence            78999998876 99999999999999999999999999999998877655555688999999999999999999999999


Q ss_pred             EEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCCh
Q 018072           91 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL  170 (361)
Q Consensus        91 ~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~  170 (361)
                      +|+..+..+|+.|+.|+.++.+.|.+....   +..                   +.|+|++|+.++++ ++++|+++++
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~v~v~~~-~~~~p~~~~~  136 (337)
T cd08261          80 RVVVDPYISCGECYACRKGRPNCCENLQVL---GVH-------------------RDGGFAEYIVVPAD-ALLVPEGLSL  136 (337)
T ss_pred             EEEECCCCCCCCChhhhCcCcccCCCCCee---eec-------------------CCCcceeEEEechh-eEECCCCCCH
Confidence            999999999999999999999999543221   111                   12489999999999 9999999999


Q ss_pred             hhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCC
Q 018072          171 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH  250 (361)
Q Consensus       171 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~  250 (361)
                      ++++++ ..+.++++++ +...+.+|++|||+|+|.+|++++|+|+.+|. +|+++.+++++.++++++|+++++++...
T Consensus       137 ~~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~~~  213 (337)
T cd08261         137 DQAALV-EPLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVGDE  213 (337)
T ss_pred             HHhhhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCccc
Confidence            999877 4778888876 77889999999999889999999999999998 89999899999999999999999988765


Q ss_pred             CccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeecCCCc
Q 018072          251 DRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKP  328 (361)
Q Consensus       251 ~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~~~~~  328 (361)
                      +  +.+.+..++++ ++|++||++|+...+..++++|+++ |+++.+|.....  ..++...+. +++++.++..   ..
T Consensus       214 ~--~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~i~~g~~~~~--~~~~~~~~~~~~~~~~~~~~---~~  285 (337)
T cd08261         214 D--VAARLRELTDGEGADVVIDATGNPASMEEAVELVAHG-GRVVLVGLSKGP--VTFPDPEFHKKELTILGSRN---AT  285 (337)
T ss_pred             C--HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEcCCCCC--CccCHHHHHhCCCEEEEecc---CC
Confidence            5  77788877766 8999999998878889999999998 999999876522  233333344 7888877632   23


Q ss_pred             CCcHHHHHHHHHcCCccc
Q 018072          329 RTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       329 ~~~~~~~~~~~~~~~l~~  346 (361)
                      .+.+++++++++++.++.
T Consensus       286 ~~~~~~~~~l~~~~~i~~  303 (337)
T cd08261         286 REDFPDVIDLLESGKVDP  303 (337)
T ss_pred             hhhHHHHHHHHHcCCCCh
Confidence            467889999999998754

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.2e-37  Score=296.50  Aligned_cols=307  Identities=28%  Similarity=0.398  Sum_probs=248.6

Q ss_pred             ceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCC------C-CCCCCcccccceeEEEEEeCCC
Q 018072           10 TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG------Q-TPLFPRIFGHEAAGVVESVGEG   82 (361)
Q Consensus        10 ~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~------~-~~~~p~~~G~e~~G~V~~~G~~   82 (361)
                      ++.+.++..+ . ++++++|.|+++++||+|||.++++|++|+..+.+..      + ..++|.++|||++|+|+++|++
T Consensus        28 ~~~~~~~~~~-~-~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~  105 (384)
T cd08265          28 NLGSKVWRYP-E-LRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKN  105 (384)
T ss_pred             cceeEEEeCC-C-EEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCC
Confidence            4555555543 3 9999999999999999999999999999998876321      1 1346889999999999999999


Q ss_pred             CCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceE
Q 018072           83 VSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVA  162 (361)
Q Consensus        83 v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~  162 (361)
                      ++.|++||+|++.+..+|+.|+.|..+..++|.+....   |+.                   ..|+|++|+.++.+.++
T Consensus       106 v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~---g~~-------------------~~g~~~~~v~v~~~~~~  163 (384)
T cd08265         106 VKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKEL---GFS-------------------ADGAFAEYIAVNARYAW  163 (384)
T ss_pred             CCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCccee---eec-------------------CCCcceeeEEechHHeE
Confidence            99999999999999999999999999999999875533   221                   12489999999999999


Q ss_pred             ECCCCC-------Chhhhhccccchhhhhhhhhhh-cCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 018072          163 KINPLA-------PLDKVCILSCGVSTGLGATLNV-AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE  234 (361)
Q Consensus       163 ~iP~~~-------~~~~aa~l~~~~~ta~~a~~~~-~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~  234 (361)
                      ++|+++       +.+ ++++..++.+||+++... .++++|++|+|+|+|++|++++|+|+.+|+.+|++++++++|.+
T Consensus       164 ~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~  242 (384)
T cd08265         164 EINELREIYSEDKAFE-AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRN  242 (384)
T ss_pred             ECCccccccccCCCHH-HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHH
Confidence            999864       444 555666889999997665 68999999999988999999999999999877999999999999


Q ss_pred             HHHHcCCCEEEcCCCC-CccHHHHHHHHcCC-CccEEEEccCCh-HHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhh
Q 018072          235 EAKKFGVTDFVNTSEH-DRPIQEVIAEMTNG-GVDRSVECTGNI-DNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN  311 (361)
Q Consensus       235 ~~~~~G~~~vv~~~~~-~~~~~~~i~~~~~~-g~Dvvid~~g~~-~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~  311 (361)
                      +++++|+++++++.+. +.++.+.+..++++ ++|+|+|++|++ ..++.++++|+++ |+++.+|.....  ..+.+..
T Consensus       243 ~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~  319 (384)
T cd08265         243 LAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAIN-GKIVYIGRAATT--VPLHLEV  319 (384)
T ss_pred             HHHHcCCCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcC-CEEEEECCCCCC--CcccHHH
Confidence            9999999998887643 12377778888876 899999999973 4788999999998 999999965432  2333333


Q ss_pred             h-ccccEEEEeeecCCCcCCcHHHHHHHHHcCCccc
Q 018072          312 V-LNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       312 ~-~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l~~  346 (361)
                      + ++..++.++....  ....+.+++++++++.++.
T Consensus       320 ~~~~~~~l~~~~~~~--~~~~~~~~~~ll~~g~l~~  353 (384)
T cd08265         320 LQVRRAQIVGAQGHS--GHGIFPSVIKLMASGKIDM  353 (384)
T ss_pred             HhhCceEEEEeeccC--CcchHHHHHHHHHcCCCCh
Confidence            3 3777888775322  2357899999999998864

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-37  Score=293.00  Aligned_cols=299  Identities=24%  Similarity=0.384  Sum_probs=251.4

Q ss_pred             eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   90 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd   90 (361)
                      |||+++.++++++++++.|.|.+.++|++||++++++|++|+..+.|..+..++|.++|||++|+|+++|++++.+++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~   80 (334)
T PRK13771          1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKPGD   80 (334)
T ss_pred             CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCCCC
Confidence            78999999998899999999999999999999999999999988877655556688999999999999999998899999


Q ss_pred             EEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCCh
Q 018072           91 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL  170 (361)
Q Consensus        91 ~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~  170 (361)
                      +|++.+..+|+.|++|..+.++.|.+..+.   |..                   ..|+|++|+.++.+.++++|+++++
T Consensus        81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~~~~~~~~~~~lp~~~~~  138 (334)
T PRK13771         81 RVASLLYAPDGTCEYCRSGEEAYCKNRLGY---GEE-------------------LDGFFAEYAKVKVTSLVKVPPNVSD  138 (334)
T ss_pred             EEEECCCCCCcCChhhcCCCcccCcccccc---ccc-------------------cCceeeeeeecchhceEECCCCCCH
Confidence            999998899999999999999999875433   211                   1248999999999999999999999


Q ss_pred             hhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCC
Q 018072          171 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE  249 (361)
Q Consensus       171 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~  249 (361)
                      .+++.+++++.+||+++.+. .++++++|+|+|+ |.+|++++|+|+..|+ +|+++++++++.+.++++ ++.+++.. 
T Consensus       139 ~~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~-  214 (334)
T PRK13771        139 EGAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGS-  214 (334)
T ss_pred             HHhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCch-
Confidence            99999999999999987554 8999999999998 9999999999999999 899999999999999888 66666554 


Q ss_pred             CCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChh-hhccccEEEEeeecCCCc
Q 018072          250 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYKP  328 (361)
Q Consensus       250 ~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~-~~~~~~~l~g~~~~~~~~  328 (361)
                       +  +.+.++.+  +++|+++|++|+ ..+..++++++++ |+++.+|.......++.... .+.+++++.++...   .
T Consensus       215 -~--~~~~v~~~--~~~d~~ld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~  284 (334)
T PRK13771        215 -K--FSEEVKKI--GGADIVIETVGT-PTLEESLRSLNMG-GKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISA---T  284 (334)
T ss_pred             -h--HHHHHHhc--CCCcEEEEcCCh-HHHHHHHHHHhcC-CEEEEEeccCCCCCcccCHHHHHhcccEEEEecCC---C
Confidence             2  55555554  379999999998 5788999999998 99999997653222122222 23488898887532   3


Q ss_pred             CCcHHHHHHHHHcCCcc
Q 018072          329 RTDLPSVVDMYMNKVIR  345 (361)
Q Consensus       329 ~~~~~~~~~~~~~~~l~  345 (361)
                      ++++++++++++++.++
T Consensus       285 ~~~~~~~~~~~~~~~l~  301 (334)
T PRK13771        285 KRDVEEALKLVAEGKIK  301 (334)
T ss_pred             HHHHHHHHHHHHcCCCc
Confidence            56789999999998874

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=100.00  E-value=5.8e-37  Score=289.11  Aligned_cols=304  Identities=28%  Similarity=0.448  Sum_probs=257.8

Q ss_pred             eeEEEeecCCCC-eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCC-CCCCCcccccceeEEEEEeCCCCCCCCC
Q 018072           11 CKAAVAWEAGKP-LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEV   88 (361)
Q Consensus        11 m~a~~~~~~~~~-~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~v~~~~~   88 (361)
                      ||++++..++++ +.+.+.|.|.+.+++|+|||.++++|+.|.....+..+ ..++|.++|+|++|+|+++|+++..+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~~   80 (338)
T cd08254           1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKV   80 (338)
T ss_pred             CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCCC
Confidence            799999999987 68888899999999999999999999999998877654 3456789999999999999999999999


Q ss_pred             CCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCC
Q 018072           89 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA  168 (361)
Q Consensus        89 Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~  168 (361)
                      ||+|+..|..+|+.|..|..++.+.|......   |..                   ..|+|++|+.++.+.++++|+++
T Consensus        81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~~~~~~~~~~~lp~~~  138 (338)
T cd08254          81 GDRVAVPAVIPCGACALCRRGRGNLCLNQGMP---GLG-------------------IDGGFAEYIVVPARALVPVPDGV  138 (338)
T ss_pred             CCEEEECCCCCCCCChhhhCcCcccCCCCCcc---ccc-------------------cCCcceeeEEechHHeEECCCCC
Confidence            99999999999999999999999999654333   211                   12489999999999999999999


Q ss_pred             ChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCC
Q 018072          169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  248 (361)
Q Consensus       169 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~  248 (361)
                      ++.+++.++.++.|||+++.+...++++++|||.|+|.+|++++++|+..|. +|+++++++++.+.++++|++.+++..
T Consensus       139 ~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~~  217 (338)
T cd08254         139 PFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSL  217 (338)
T ss_pred             CHHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCC
Confidence            9999999999999999998777889999999999889999999999999998 799999999999999999998888766


Q ss_pred             CCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeecCC
Q 018072          249 EHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNY  326 (361)
Q Consensus       249 ~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~~~  326 (361)
                      ...  ..+.+ ....+ ++|+++|++|....++.++++|+++ |+++.+|.......++  ...++ ++.++.+++... 
T Consensus       218 ~~~--~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~-  290 (338)
T cd08254         218 DDS--PKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPG-GRIVVVGLGRDKLTVD--LSDLIARELRIIGSFGGT-  290 (338)
T ss_pred             CcC--HHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcC-CEEEEECCCCCCCccC--HHHHhhCccEEEEeccCC-
Confidence            544  55555 44444 8999999999878899999999998 9999998755333333  33333 888888876332 


Q ss_pred             CcCCcHHHHHHHHHcCCccc
Q 018072          327 KPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       327 ~~~~~~~~~~~~~~~~~l~~  346 (361)
                        .+.++.++++++++.+..
T Consensus       291 --~~~~~~~~~ll~~~~l~~  308 (338)
T cd08254         291 --PEDLPEVLDLIAKGKLDP  308 (338)
T ss_pred             --HHHHHHHHHHHHcCCCcc
Confidence              468889999999998864

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=100.00  E-value=9.1e-37  Score=288.81  Aligned_cols=304  Identities=29%  Similarity=0.443  Sum_probs=256.2

Q ss_pred             eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   90 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd   90 (361)
                      |||+++.+++. +.+++.+.|++.+++|+|||.++++|+.|+.++.+.......|.++|+|++|+|+++|++++.+++||
T Consensus         1 ~~~~~~~~~~~-~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd   79 (343)
T cd08235           1 MKAAVLHGPND-VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGD   79 (343)
T ss_pred             CeEEEEecCCc-eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCCCC
Confidence            68999998886 99999999999999999999999999999998877553344577999999999999999999999999


Q ss_pred             EEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccc-----eEECC
Q 018072           91 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGC-----VAKIN  165 (361)
Q Consensus        91 ~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~-----~~~iP  165 (361)
                      +|+..++.+|++|+.|..++.+.|....+.   |.                   ...|+|++|+.++.+.     ++++|
T Consensus        80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~g~~~~~v~v~~~~~~~~~~~~lP  137 (343)
T cd08235          80 RVFVAPHVPCGECHYCLRGNENMCPNYKKF---GN-------------------LYDGGFAEYVRVPAWAVKRGGVLKLP  137 (343)
T ss_pred             EEEEccCCCCCCChHHHCcCcccCCCccee---cc-------------------CCCCcceeeEEecccccccccEEECC
Confidence            999999999999999999999999875443   21                   1135899999999998     99999


Q ss_pred             CCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEE
Q 018072          166 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV  245 (361)
Q Consensus       166 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv  245 (361)
                      +++++.+++.+ .++.+||+++. ..++++|++|+|+|+|.+|++++|+|+..|.+.|+++++++++.+.++++|+++++
T Consensus       138 ~~~~~~~aa~~-~~~~~a~~~l~-~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~  215 (343)
T cd08235         138 DNVSFEEAALV-EPLACCINAQR-KAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTI  215 (343)
T ss_pred             CCCCHHHHHhh-hHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEe
Confidence            99999998877 68899999874 45899999999998899999999999999994499999999999999999999988


Q ss_pred             cCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeee
Q 018072          246 NTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFF  323 (361)
Q Consensus       246 ~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~  323 (361)
                      ++.+.+  +.+.+..+.++ ++|++||++++...+..++++++++ |+++.+|.........++...+. +++++.++..
T Consensus       216 ~~~~~~--~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  292 (343)
T cd08235         216 DAAEED--LVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG-GRILFFGGLPKGSTVNIDPNLIHYREITITGSYA  292 (343)
T ss_pred             cCCccC--HHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEeccCCCCCcccCHHHHhhCceEEEEEec
Confidence            877655  77777777766 8999999999867889999999998 99999986553323333333333 8888877653


Q ss_pred             cCCCcCCcHHHHHHHHHcCCcc
Q 018072          324 GNYKPRTDLPSVVDMYMNKVIR  345 (361)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~l~  345 (361)
                      ..   .+.+++++++++++++.
T Consensus       293 ~~---~~~~~~~~~l~~~~~l~  311 (343)
T cd08235         293 AS---PEDYKEALELIASGKID  311 (343)
T ss_pred             CC---hhhHHHHHHHHHcCCCC
Confidence            32   46788999999998874

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=3.3e-37  Score=291.39  Aligned_cols=305  Identities=25%  Similarity=0.403  Sum_probs=252.1

Q ss_pred             eEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCE
Q 018072           12 KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDH   91 (361)
Q Consensus        12 ~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~   91 (361)
                      |+++.+..+..+++++++.|+|.++|++|||+++++|++|+..+.+......+|.++|||++|+|+++|++++.|++||+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~   80 (337)
T cd05283           1 KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDR   80 (337)
T ss_pred             CceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCCCE
Confidence            57888888777999999999999999999999999999999988876655567889999999999999999999999999


Q ss_pred             Ee-ecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCCh
Q 018072           92 VL-PVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL  170 (361)
Q Consensus        92 V~-~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~  170 (361)
                      |+ ......|++|.+|+++..++|....+... |..         ..     .....|+|+||+.++.+.++++|+++++
T Consensus        81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---------~~-----~~~~~g~~~~~~~v~~~~~~~lp~~~~~  145 (337)
T cd05283          81 VGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYN-GKY---------PD-----GTITQGGYADHIVVDERFVFKIPEGLDS  145 (337)
T ss_pred             EEEecCCCCCCCCccccCCchhcCcchhhccc-ccc---------cC-----CCcCCCcceeEEEechhheEECCCCCCH
Confidence            97 44556899999999999999987543310 000         00     0112358999999999999999999999


Q ss_pred             hhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCC
Q 018072          171 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH  250 (361)
Q Consensus       171 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~  250 (361)
                      ++++.+.+.+.+||+++ ....+++|++++|.|+|++|++++++|+.+|. +|++++++++++++++++|++.+++....
T Consensus       146 ~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~~~  223 (337)
T cd05283         146 AAAAPLLCAGITVYSPL-KRNGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATKDP  223 (337)
T ss_pred             HHhhhhhhHHHHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCcch
Confidence            99999999999999986 44568999999998889999999999999999 89999999999999999999988876543


Q ss_pred             CccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeecCCCcC
Q 018072          251 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKPR  329 (361)
Q Consensus       251 ~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~~~~~~  329 (361)
                      +  +.+   . ..+++|++||++|....+..++++++++ |+++.+|......  .+++..++ +++++.+++.+.   .
T Consensus       224 ~--~~~---~-~~~~~d~v~~~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~--~~~~~~~~~~~~~i~~~~~~~---~  291 (337)
T cd05283         224 E--AMK---K-AAGSLDLIIDTVSASHDLDPYLSLLKPG-GTLVLVGAPEEPL--PVPPFPLIFGRKSVAGSLIGG---R  291 (337)
T ss_pred             h--hhh---h-ccCCceEEEECCCCcchHHHHHHHhcCC-CEEEEEeccCCCC--ccCHHHHhcCceEEEEecccC---H
Confidence            2  211   1 2348999999999865689999999998 9999999765332  33444434 999999987654   4


Q ss_pred             CcHHHHHHHHHcCCcc
Q 018072          330 TDLPSVVDMYMNKVIR  345 (361)
Q Consensus       330 ~~~~~~~~~~~~~~l~  345 (361)
                      ++++++++++++++++
T Consensus       292 ~~~~~~~~~~~~~~l~  307 (337)
T cd05283         292 KETQEMLDFAAEHGIK  307 (337)
T ss_pred             HHHHHHHHHHHhCCCc
Confidence            6889999999988874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=100.00  E-value=4.1e-37  Score=289.19  Aligned_cols=279  Identities=20%  Similarity=0.270  Sum_probs=228.1

Q ss_pred             eeEEEeecCCC-----CeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCC
Q 018072           11 CKAAVAWEAGK-----PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVS   84 (361)
Q Consensus        11 m~a~~~~~~~~-----~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~   84 (361)
                      |||+++.+++.     .++++++|.|.|+++||+|||.++|+|++|+.++.|..+. ..+|.++|||++|+|+++|+++.
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~   80 (324)
T cd08291           1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL   80 (324)
T ss_pred             CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence            78999998884     3788899999999999999999999999999988876543 45689999999999999999999


Q ss_pred             C-CCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEE
Q 018072           85 D-LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAK  163 (361)
Q Consensus        85 ~-~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~  163 (361)
                      + |++||+|+..+.                              .                  .|+|+||+++|.+.+++
T Consensus        81 ~~~~vGd~V~~~~~------------------------------~------------------~g~~a~~~~v~~~~~~~  112 (324)
T cd08291          81 AQSLIGKRVAFLAG------------------------------S------------------YGTYAEYAVADAQQCLP  112 (324)
T ss_pred             ccCCCCCEEEecCC------------------------------C------------------CCcchheeeecHHHeEE
Confidence            6 999999985320                              0                  14899999999999999


Q ss_pred             CCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEE-c-CCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCC
Q 018072          164 INPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVF-G-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV  241 (361)
Q Consensus       164 iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~-G-~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~  241 (361)
                      +|+++++++++.+++...|||.+ .+.... ++++++|+ | +|++|++++|+|+.+|+ +|++++++++++++++++|+
T Consensus       113 iP~~~~~~~aa~~~~~~~ta~~~-~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~  189 (324)
T cd08291         113 LPDGVSFEQGASSFVNPLTALGM-LETARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGA  189 (324)
T ss_pred             CCCCCCHHHHhhhcccHHHHHHH-HHhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCC
Confidence            99999999999888888999754 455555 56666665 4 59999999999999999 89999999999999999999


Q ss_pred             CEEEcCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhh-hccccEEE
Q 018072          242 TDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLK  319 (361)
Q Consensus       242 ~~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~l~  319 (361)
                      ++++++...+  +.+.+++++.+ ++|++||++|+ ......+++++++ |+++.+|.........++... +.+++++.
T Consensus       190 ~~~i~~~~~~--~~~~v~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~  265 (324)
T cd08291         190 EYVLNSSDPD--FLEDLKELIAKLNATIFFDAVGG-GLTGQILLAMPYG-STLYVYGYLSGKLDEPIDPVDLIFKNKSIE  265 (324)
T ss_pred             cEEEECCCcc--HHHHHHHHhCCCCCcEEEECCCc-HHHHHHHHhhCCC-CEEEEEEecCCCCcccCCHHHHhhcCcEEE
Confidence            9999887655  78888888776 89999999998 5567789999998 999999975433221232333 34899999


Q ss_pred             EeeecCCC---cCCcHHHHHHHHHcCCcc
Q 018072          320 GTFFGNYK---PRTDLPSVVDMYMNKVIR  345 (361)
Q Consensus       320 g~~~~~~~---~~~~~~~~~~~~~~~~l~  345 (361)
                      +++.+.+.   .++++++++++++ ++++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  293 (324)
T cd08291         266 GFWLTTWLQKLGPEVVKKLKKLVK-TELK  293 (324)
T ss_pred             EEEHHHhhcccCHHHHHHHHHHHh-Cccc
Confidence            98876542   2346778888887 6664

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.4e-36  Score=287.41  Aligned_cols=294  Identities=22%  Similarity=0.310  Sum_probs=238.2

Q ss_pred             eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCC-----------CCCCCcccccceeEEEEEe
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-----------TPLFPRIFGHEAAGVVESV   79 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-----------~~~~p~~~G~e~~G~V~~~   79 (361)
                      |||+++..+  ++++++++.|++.++||+|||.++++|+.|+..+.|...           ...+|.++|+|++|+|+++
T Consensus         1 m~a~~~~~~--~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~v   78 (341)
T cd08262           1 MRAAVFRDG--PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDY   78 (341)
T ss_pred             CceEEEeCC--ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEe
Confidence            789999876  499999999999999999999999999999998876321           2235789999999999999


Q ss_pred             CCCCCC-CCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEec
Q 018072           80 GEGVSD-LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHS  158 (361)
Q Consensus        80 G~~v~~-~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~  158 (361)
                      |+++++ |++||+|+..+...|+.|..|..++..                                ...|+|+||+.++.
T Consensus        79 G~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~--------------------------------~~~g~~~~~~~v~~  126 (341)
T cd08262          79 GPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSP--------------------------------EAPGGYAEYMLLSE  126 (341)
T ss_pred             CCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCc--------------------------------CCCCceeeeEEech
Confidence            999987 999999999999999999999432111                                01248999999999


Q ss_pred             cceEECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH
Q 018072          159 GCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK  238 (361)
Q Consensus       159 ~~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~  238 (361)
                      +.++++|+++++++++ ++.++.+||++ ...+++++|++|||+|+|++|.+++|+|+.+|+..++++++++++.+++++
T Consensus       127 ~~~~~lP~~~s~~~a~-~~~~~~~a~~~-~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~  204 (341)
T cd08262         127 ALLLRVPDGLSMEDAA-LTEPLAVGLHA-VRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALA  204 (341)
T ss_pred             HHeEECCCCCCHHHhh-hhhhHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH
Confidence            9999999999998877 55688899998 578899999999999889999999999999999668888899999999999


Q ss_pred             cCCCEEEcCCCCCc--cHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccc
Q 018072          239 FGVTDFVNTSEHDR--PIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNE  315 (361)
Q Consensus       239 ~G~~~vv~~~~~~~--~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~  315 (361)
                      +|+++++++...+.  .+. .+.....+ ++|++||++|+...+..++++++++ |+++.+|.......+.. ...++++
T Consensus       205 ~g~~~~i~~~~~~~~~~~~-~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~-~~~~~~~  281 (341)
T cd08262         205 MGADIVVDPAADSPFAAWA-AELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG-GRIVVVGVCMESDNIEP-ALAIRKE  281 (341)
T ss_pred             cCCcEEEcCCCcCHHHHHH-HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEECCCCCCCccCH-HHHhhcc
Confidence            99988888765421  122 23344444 8999999999855788899999998 99999997643322221 1223477


Q ss_pred             cEEEEeeecCCCcCCcHHHHHHHHHcCCccc
Q 018072          316 RTLKGTFFGNYKPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       316 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~l~~  346 (361)
                      +++.++...   ..+++.+++++++++++++
T Consensus       282 ~~~~~~~~~---~~~~~~~~~~l~~~g~i~~  309 (341)
T cd08262         282 LTLQFSLGY---TPEEFADALDALAEGKVDV  309 (341)
T ss_pred             eEEEEEecc---cHHHHHHHHHHHHcCCCCh
Confidence            887765432   2457899999999998864

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=100.00  E-value=1.2e-36  Score=288.32  Aligned_cols=303  Identities=28%  Similarity=0.462  Sum_probs=247.0

Q ss_pred             EEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccC-C-C-CCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018072           13 AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-G-Q-TPLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (361)
Q Consensus        13 a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~-~-~-~~~~p~~~G~e~~G~V~~~G~~v~~~~~G   89 (361)
                      |+++.++.. +.+++.|.|.|.++||+|||.++++|+.|+..+.+. . . ...+|.++|+|++|+|+++|++++.|++|
T Consensus         1 ~~~~~~~~~-~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G   79 (343)
T cd05285           1 AAVLHGPGD-LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVG   79 (343)
T ss_pred             CceEecCCc-eeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCC
Confidence            467788865 999999999999999999999999999998875321 1 1 12357789999999999999999999999


Q ss_pred             CEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCC
Q 018072           90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP  169 (361)
Q Consensus        90 d~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~  169 (361)
                      |+|++.+..+|+.|.+|+.|++++|.+..+.   +..                  ...|+|++|++++.+.++++|++++
T Consensus        80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~------------------~~~g~~~~~~~v~~~~~~~lP~~~~  138 (343)
T cd05285          80 DRVAIEPGVPCRTCEFCKSGRYNLCPDMRFA---ATP------------------PVDGTLCRYVNHPADFCHKLPDNVS  138 (343)
T ss_pred             CEEEEccccCCCCChhHhCcCcccCcCcccc---ccc------------------cCCCceeeeEEecHHHcEECcCCCC
Confidence            9999999999999999999999999864332   100                  0124899999999999999999999


Q ss_pred             hhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCC
Q 018072          170 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE  249 (361)
Q Consensus       170 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~  249 (361)
                      +++++.+ .++.+||+++ +.+.+++|++|+|.|+|.+|++++|+|+.+|++.|+++++++++.++++++|++.++++..
T Consensus       139 ~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~  216 (343)
T cd05285         139 LEEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT  216 (343)
T ss_pred             HHHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEecccc
Confidence            9998877 4788999985 8899999999999988999999999999999955999999999999999999999988766


Q ss_pred             CCc-cHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCCC
Q 018072          250 HDR-PIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK  327 (361)
Q Consensus       250 ~~~-~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~  327 (361)
                      .+. .+.+.+...+.+ ++|++||++|+...+..++++++++ |+++.+|.......+++. ...++++++.++...   
T Consensus       217 ~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~---  291 (343)
T cd05285         217 EDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG-GTVVLVGMGKPEVTLPLS-AASLREIDIRGVFRY---  291 (343)
T ss_pred             ccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEccCCCCCccCHH-HHhhCCcEEEEeccC---
Confidence            441 136667776666 8999999999866889999999998 999999865533222221 223488888876532   


Q ss_pred             cCCcHHHHHHHHHcCCcc
Q 018072          328 PRTDLPSVVDMYMNKVIR  345 (361)
Q Consensus       328 ~~~~~~~~~~~~~~~~l~  345 (361)
                       .+.+++++++++++++.
T Consensus       292 -~~~~~~~~~~l~~~~l~  308 (343)
T cd05285         292 -ANTYPTAIELLASGKVD  308 (343)
T ss_pred             -hHHHHHHHHHHHcCCCC
Confidence             26788899999888764

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd05281 TDH Threonine dehydrogenase

Probab=100.00  E-value=2.8e-36  Score=285.52  Aligned_cols=304  Identities=31%  Similarity=0.421  Sum_probs=247.1

Q ss_pred             eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCC---CCCCCCcccccceeEEEEEeCCCCCCCC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG---QTPLFPRIFGHEAAGVVESVGEGVSDLE   87 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~V~~~G~~v~~~~   87 (361)
                      |||+++..++..+.+.+.+.|.|.++|++|||+++++|+.|+.++.+..   ....+|.++|||++|+|+.+|++++.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~   80 (341)
T cd05281           1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVK   80 (341)
T ss_pred             CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCC
Confidence            7899999888669999999999999999999999999999988754421   1234577899999999999999999999


Q ss_pred             CCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072           88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  167 (361)
Q Consensus        88 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~  167 (361)
                      +||+|+..+..+|+.|+.|..++.++|....+.   |.                   ...|+|++|++++.+.++++|++
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~g~~~~~v~v~~~~~~~lP~~  138 (341)
T cd05281          81 VGDYVSAETHIVCGKCYQCRTGNYHVCQNTKIL---GV-------------------DTDGCFAEYVVVPEENLWKNDKD  138 (341)
T ss_pred             CCCEEEECCccCCCCChHHHCcCcccCcccceE---ec-------------------cCCCcceEEEEechHHcEECcCC
Confidence            999999999999999999999999999754332   21                   11358999999999999999999


Q ss_pred             CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcC
Q 018072          168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  247 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~  247 (361)
                      ++++.+ ++..++.++++++.  ...++|++|+|.|+|.+|++++|+|+..|..+|++++++++|.+.++++|++++++.
T Consensus       139 ~~~~~a-~~~~~~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~  215 (341)
T cd05281         139 IPPEIA-SIQEPLGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINP  215 (341)
T ss_pred             CCHHHh-hhhhHHHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCc
Confidence            998555 55557888888754  455799999999889999999999999998668888889999999999999888876


Q ss_pred             CCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCC
Q 018072          248 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY  326 (361)
Q Consensus       248 ~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~  326 (361)
                      ...+  +. .+..+.++ ++|++||++|+...+..++++|+++ |+++.+|........++.....++++++.++..  .
T Consensus       216 ~~~~--~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~  289 (341)
T cd05281         216 REED--VV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG-GRVSILGLPPGPVDIDLNNLVIFKGLTVQGITG--R  289 (341)
T ss_pred             cccc--HH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCCCCcccccchhhhccceEEEEEec--C
Confidence            6544  66 67777765 8999999999878889999999998 999999876533233322223447888877652  2


Q ss_pred             CcCCcHHHHHHHHHcCCcc
Q 018072          327 KPRTDLPSVVDMYMNKVIR  345 (361)
Q Consensus       327 ~~~~~~~~~~~~~~~~~l~  345 (361)
                      ...+.+.++++++.++.+.
T Consensus       290 ~~~~~~~~~~~~l~~~~l~  308 (341)
T cd05281         290 KMFETWYQVSALLKSGKVD  308 (341)
T ss_pred             CcchhHHHHHHHHHcCCCC
Confidence            2235678899999988864

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=3.5e-36  Score=284.61  Aligned_cols=305  Identities=31%  Similarity=0.479  Sum_probs=257.1

Q ss_pred             eeEEEeecCC-CCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCCCCCC
Q 018072           11 CKAAVAWEAG-KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEV   88 (361)
Q Consensus        11 m~a~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~~~~~   88 (361)
                      |||+++.+++ ..+++++++.|.|.++|++|||.++++|++|..++.+..+. ...|.++|||++|+|+++|++++.+++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~~   80 (341)
T cd08297           1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLKV   80 (341)
T ss_pred             CceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCCC
Confidence            7999998877 23999999999999999999999999999999888775432 345678999999999999999999999


Q ss_pred             CCEEeecC-CCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072           89 GDHVLPVF-TGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  167 (361)
Q Consensus        89 Gd~V~~~~-~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~  167 (361)
                      ||+|+..+ ..+|+.|.+|+.++.+.|.+....   |.                   ...|+|++|+.++.+.++++|++
T Consensus        81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~g~~~s~~~~~~~~~~~lp~~  138 (341)
T cd08297          81 GDRVGVKWLYDACGKCEYCRTGDETLCPNQKNS---GY-------------------TVDGTFAEYAIADARYVTPIPDG  138 (341)
T ss_pred             CCEEEEecCCCCCCCCccccCCCcccCCCcccc---cc-------------------ccCCcceeEEEeccccEEECCCC
Confidence            99998765 568999999999999999875433   21                   11248999999999999999999


Q ss_pred             CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEc
Q 018072          168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  246 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~  246 (361)
                      +++.+++.++..+.|||+++.. .+++++++|||+|+ +.+|++++++|+++|+ +|+++.+++++.+.++++|++.+++
T Consensus       139 ~~~~~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~  216 (341)
T cd08297         139 LSFEQAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVD  216 (341)
T ss_pred             CCHHHHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEc
Confidence            9999999999999999998655 58999999999998 6799999999999999 8999999999999999999999988


Q ss_pred             CCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeec
Q 018072          247 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFG  324 (361)
Q Consensus       247 ~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~  324 (361)
                      +...+  +.+.+..++++ ++|+++|+.++...+..++++++++ |+++.+|.... ...+++...++ +++++.+...+
T Consensus       217 ~~~~~--~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~  292 (341)
T cd08297         217 FKKSD--DVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG-GTLVCVGLPPG-GFIPLDPFDLVLRGITIVGSLVG  292 (341)
T ss_pred             CCCcc--HHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcC-CEEEEecCCCC-CCCCCCHHHHHhcccEEEEeccC
Confidence            77654  77778777765 8999999888778999999999998 99999997652 22344444333 89999886543


Q ss_pred             CCCcCCcHHHHHHHHHcCCccc
Q 018072          325 NYKPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~l~~  346 (361)
                      .   .+++++++++++++++..
T Consensus       293 ~---~~~~~~~~~~~~~~~l~~  311 (341)
T cd08297         293 T---RQDLQEALEFAARGKVKP  311 (341)
T ss_pred             C---HHHHHHHHHHHHcCCCcc
Confidence            3   478899999999988753

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2e-36  Score=284.35  Aligned_cols=293  Identities=27%  Similarity=0.353  Sum_probs=240.6

Q ss_pred             eeEEEeecCC-CCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018072           11 CKAAVAWEAG-KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (361)
Q Consensus        11 m~a~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~G   89 (361)
                      |||+++..++ +.+++++.+.|+++++||+||+.++++|++|+..+.+ .....+|.++|||++|+|+++|++++.|++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~-~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~G   79 (325)
T cd08264           1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINA-VKVKPMPHIPGAEFAGVVEEVGDHVKGVKKG   79 (325)
T ss_pred             CeeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhC-CCCCCCCeecccceeEEEEEECCCCCCCCCC
Confidence            7899987766 3488889998889999999999999999999988764 2223457789999999999999999999999


Q ss_pred             CEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCC
Q 018072           90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP  169 (361)
Q Consensus        90 d~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~  169 (361)
                      |+|+..+..+|+.|..|..|+++.|.+..+.   |..                   ..|+|++|+.++.+.++++|++++
T Consensus        80 d~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~~~v~~~~~~~~p~~~~  137 (325)
T cd08264          80 DRVVVYNRVFDGTCDMCLSGNEMLCRNGGII---GVV-------------------SNGGYAEYIVVPEKNLFKIPDSIS  137 (325)
T ss_pred             CEEEECCCcCCCCChhhcCCCccccCcccee---ecc-------------------CCCceeeEEEcCHHHceeCCCCCC
Confidence            9999999999999999999999999875433   211                   124899999999999999999999


Q ss_pred             hhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCC
Q 018072          170 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  248 (361)
Q Consensus       170 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~  248 (361)
                      +++++.+++++.+||+++. ..++++|++|+|+|+ |++|++++++|+++|+ +|+++.+    .+.++++|++++++..
T Consensus       138 ~~~~~~~~~~~~~a~~~l~-~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~-~v~~~~~----~~~~~~~g~~~~~~~~  211 (325)
T cd08264         138 DELAASLPVAALTAYHALK-TAGLGPGETVVVFGASGNTGIFAVQLAKMMGA-EVIAVSR----KDWLKEFGADEVVDYD  211 (325)
T ss_pred             HHHhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeH----HHHHHHhCCCeeecch
Confidence            9999999999999999864 488999999999998 9999999999999999 7887752    3677789998888754


Q ss_pred             CCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeecCCC
Q 018072          249 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYK  327 (361)
Q Consensus       249 ~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~~~~  327 (361)
                      +    ..+.++.++ +++|+|+|++|+ ..+..++++|+++ |+++.+|... .....++...+. ++.++.++..+.  
T Consensus       212 ~----~~~~l~~~~-~~~d~vl~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--  281 (325)
T cd08264         212 E----VEEKVKEIT-KMADVVINSLGS-SFWDLSLSVLGRG-GRLVTFGTLT-GGEVKLDLSDLYSKQISIIGSTGGT--  281 (325)
T ss_pred             H----HHHHHHHHh-CCCCEEEECCCH-HHHHHHHHhhccC-CEEEEEecCC-CCCCccCHHHHhhcCcEEEEccCCC--
Confidence            3    344556555 689999999998 6889999999998 9999998752 222333333333 788888876543  


Q ss_pred             cCCcHHHHHHHHHcCC
Q 018072          328 PRTDLPSVVDMYMNKV  343 (361)
Q Consensus       328 ~~~~~~~~~~~~~~~~  343 (361)
                       +++++++++++...+
T Consensus       282 -~~~~~~~~~l~~~~~  296 (325)
T cd08264         282 -RKELLELVKIAKDLK  296 (325)
T ss_pred             -HHHHHHHHHHHHcCC
Confidence             467888888886444

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.6e-36  Score=282.95  Aligned_cols=285  Identities=26%  Similarity=0.396  Sum_probs=237.0

Q ss_pred             eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   90 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd   90 (361)
                      |||+++.++++ ++++++|.|.++++||+|||.++++|++|..++.|..+   .|.++|||++|+|+++|++   +++||
T Consensus         1 ~~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~---~~~~~G~e~~G~Vv~~G~~---~~~G~   73 (319)
T cd08242           1 MKALVLDGGLD-LRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP---FPGVPGHEFVGIVEEGPEA---ELVGK   73 (319)
T ss_pred             CeeEEEeCCCc-EEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC---CCCccCceEEEEEEEeCCC---CCCCC
Confidence            78999998775 99999999999999999999999999999998877543   5788999999999999997   68999


Q ss_pred             EEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCCh
Q 018072           91 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL  170 (361)
Q Consensus        91 ~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~  170 (361)
                      +|...+..+|+.|.+|..+.++.|...+..   +...                  ..|+|++|++++.+.++++|++++.
T Consensus        74 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~------------------~~g~~~~~~~v~~~~~~~lP~~~~~  132 (319)
T cd08242          74 RVVGEINIACGRCEYCRRGLYTHCPNRTVL---GIVD------------------RDGAFAEYLTLPLENLHVVPDLVPD  132 (319)
T ss_pred             eEEECCCcCCCCChhhhCcCcccCCCCccc---CccC------------------CCCceEEEEEechHHeEECcCCCCH
Confidence            999999999999999999999999876544   2110                  1248999999999999999999999


Q ss_pred             hhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCC
Q 018072          171 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH  250 (361)
Q Consensus       171 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~  250 (361)
                      ++++.+ .++.++|.+ .+..++++|++|+|+|+|.+|++++|+|+.+|+ +|++++.+++++++++++|++.++++...
T Consensus       133 ~~aa~~-~~~~~~~~~-~~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~  209 (319)
T cd08242         133 EQAVFA-EPLAAALEI-LEQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALARRLGVETVLPDEAE  209 (319)
T ss_pred             HHhhhh-hHHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEeCcccc
Confidence            888764 345566654 577889999999999989999999999999999 69999999999999999999887766431


Q ss_pred             CccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh-ccccEEEEeeecCCCcC
Q 018072          251 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNYKPR  329 (361)
Q Consensus       251 ~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~~~~~~  329 (361)
                                ..++++|+++|++|+...++.++++++++ |+++..+.......+  +...+ +++.++.++..+     
T Consensus       210 ----------~~~~~~d~vid~~g~~~~~~~~~~~l~~~-g~~v~~~~~~~~~~~--~~~~~~~~~~~i~~~~~~-----  271 (319)
T cd08242         210 ----------SEGGGFDVVVEATGSPSGLELALRLVRPR-GTVVLKSTYAGPASF--DLTKAVVNEITLVGSRCG-----  271 (319)
T ss_pred             ----------ccCCCCCEEEECCCChHHHHHHHHHhhcC-CEEEEEcccCCCCcc--CHHHheecceEEEEEecc-----
Confidence                      12238999999999877889999999998 999987765433333  33333 388888877532     


Q ss_pred             CcHHHHHHHHHcCCcc
Q 018072          330 TDLPSVVDMYMNKVIR  345 (361)
Q Consensus       330 ~~~~~~~~~~~~~~l~  345 (361)
                       .++++++++++++++
T Consensus       272 -~~~~~~~~~~~~~l~  286 (319)
T cd08242         272 -PFAPALRLLRKGLVD  286 (319)
T ss_pred             -cHHHHHHHHHcCCCC
Confidence             388899999998884

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=100.00  E-value=9.1e-37  Score=266.49  Aligned_cols=285  Identities=22%  Similarity=0.316  Sum_probs=234.0

Q ss_pred             cccceeEEEeecCCCC---eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCC
Q 018072            7 LILTCKAAVAWEAGKP---LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEG   82 (361)
Q Consensus         7 ~~~~m~a~~~~~~~~~---~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~   82 (361)
                      ++...|++++.+.|+|   +++++.++|+....+|+||.+|+.||++|+..++|.++. +.+|.+-|+|++|+|+.+|++
T Consensus        16 ~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vGs~   95 (354)
T KOG0025|consen   16 MPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVGSN   95 (354)
T ss_pred             cccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEecCC
Confidence            5677899999999988   889999999988888999999999999999999999986 568999999999999999999


Q ss_pred             CCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceE
Q 018072           83 VSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVA  162 (361)
Q Consensus        83 v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~  162 (361)
                      +..|++||+|+....                                                +.|+|++|.+.+++.++
T Consensus        96 vkgfk~Gd~VIp~~a------------------------------------------------~lGtW~t~~v~~e~~Li  127 (354)
T KOG0025|consen   96 VKGFKPGDWVIPLSA------------------------------------------------NLGTWRTEAVFSESDLI  127 (354)
T ss_pred             cCccCCCCeEeecCC------------------------------------------------CCccceeeEeecccceE
Confidence            999999999985421                                                24699999999999999


Q ss_pred             ECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChh----hHHHHH
Q 018072          163 KINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK----RFEEAK  237 (361)
Q Consensus       163 ~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~----~~~~~~  237 (361)
                      ++++.++.+.||++.++-.|||+.+.+..++.+||+|+-.|+ +.+|++.+|+|+++|.+.|=++ |+..    -.+.++
T Consensus       128 ~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvV-RdR~~ieel~~~Lk  206 (354)
T KOG0025|consen  128 KVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVV-RDRPNIEELKKQLK  206 (354)
T ss_pred             EcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEe-ecCccHHHHHHHHH
Confidence            999999999999999999999999988999999999988898 9999999999999999665555 5443    334456


Q ss_pred             HcCCCEEEcCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCC-ceeecChhhhccc
Q 018072          238 KFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD-AVFMTKPINVLNE  315 (361)
Q Consensus       238 ~~G~~~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~-~~~~~~~~~~~~~  315 (361)
                      .+||++|+...+-.  -.+..+..... .+.+.|||+|+ .......+.|.++ |+++.+|.++.. ..++.. .++||+
T Consensus       207 ~lGA~~ViTeeel~--~~~~~k~~~~~~~prLalNcVGG-ksa~~iar~L~~G-gtmvTYGGMSkqPv~~~ts-~lIFKd  281 (354)
T KOG0025|consen  207 SLGATEVITEEELR--DRKMKKFKGDNPRPRLALNCVGG-KSATEIARYLERG-GTMVTYGGMSKQPVTVPTS-LLIFKD  281 (354)
T ss_pred             HcCCceEecHHHhc--chhhhhhhccCCCceEEEeccCc-hhHHHHHHHHhcC-ceEEEecCccCCCcccccc-hheecc
Confidence            69999998543321  11111122223 78999999999 5667777899997 999999987733 333333 335699


Q ss_pred             cEEEEeeecCCCcCC--------cHHHHHHHHHcCCcc
Q 018072          316 RTLKGTFFGNYKPRT--------DLPSVVDMYMNKVIR  345 (361)
Q Consensus       316 ~~l~g~~~~~~~~~~--------~~~~~~~~~~~~~l~  345 (361)
                      ++++|+|+..|.+.+        .+.++.+++++|+|.
T Consensus       282 l~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~  319 (354)
T KOG0025|consen  282 LKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLK  319 (354)
T ss_pred             ceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeec
Confidence            999999999986422        236778899999985

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=100.00  E-value=4.5e-36  Score=281.53  Aligned_cols=280  Identities=23%  Similarity=0.315  Sum_probs=235.5

Q ss_pred             eeEEEeecCCCC---eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCC-CCCCCcccccceeEEEEEeCCCCCCC
Q 018072           11 CKAAVAWEAGKP---LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDL   86 (361)
Q Consensus        11 m~a~~~~~~~~~---~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~v~~~   86 (361)
                      |||+++.+++.+   ++++++|.|.+.++||+|||.++++|++|+..+.|..+ ....|.++|||++|+|+++|++++.+
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~   80 (324)
T cd08292           1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL   80 (324)
T ss_pred             CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence            789999888753   78899999999999999999999999999998877654 34568899999999999999999999


Q ss_pred             CCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCC
Q 018072           87 EVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP  166 (361)
Q Consensus        87 ~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~  166 (361)
                      ++||+|+..+.                                                 .|+|++|+.++.+.++++|+
T Consensus        81 ~~Gd~V~~~~~-------------------------------------------------~g~~~~~~~~~~~~~~~ip~  111 (324)
T cd08292          81 QVGQRVAVAPV-------------------------------------------------HGTWAEYFVAPADGLVPLPD  111 (324)
T ss_pred             CCCCEEEeccC-------------------------------------------------CCcceeEEEEchHHeEECCC
Confidence            99999985421                                                 14899999999999999999


Q ss_pred             CCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEE
Q 018072          167 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV  245 (361)
Q Consensus       167 ~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv  245 (361)
                      ++++++++.+++...++|+++ +..++++|++|||+|+ |.+|++++|+|+++|+ .++++..++++.+.++++|+++++
T Consensus       112 ~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~  189 (324)
T cd08292         112 GISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVV  189 (324)
T ss_pred             CCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEE
Confidence            999999999988889999985 5688999999999987 9999999999999999 788888888888888889998888


Q ss_pred             cCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhh-hccccEEEEeee
Q 018072          246 NTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFF  323 (361)
Q Consensus       246 ~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~l~g~~~  323 (361)
                      +....+  +.+.+..++++ ++|++||++|+ .....++++++++ |+++.+|... .....++... +.+++++.++..
T Consensus       190 ~~~~~~--~~~~i~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-g~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~  264 (324)
T cd08292         190 STEQPG--WQDKVREAAGGAPISVALDSVGG-KLAGELLSLLGEG-GTLVSFGSMS-GEPMQISSGDLIFKQATVRGFWG  264 (324)
T ss_pred             cCCCch--HHHHHHHHhCCCCCcEEEECCCC-hhHHHHHHhhcCC-cEEEEEecCC-CCCCcCCHHHHhhCCCEEEEEEc
Confidence            876544  77788888877 99999999998 5778999999998 9999999753 2233333332 348999998876


Q ss_pred             cCCC-------cCCcHHHHHHHHHcCCccc
Q 018072          324 GNYK-------PRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       324 ~~~~-------~~~~~~~~~~~~~~~~l~~  346 (361)
                      ..+.       ..+.++++++++.++.+++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~  294 (324)
T cd08292         265 GRWSQEMSVEYRKRMIAELLTLALKGQLLL  294 (324)
T ss_pred             HHhhhhcCHHHHHHHHHHHHHHHHCCCccC
Confidence            5422       1236788999999998864

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=100.00  E-value=1.5e-35  Score=280.58  Aligned_cols=305  Identities=30%  Similarity=0.469  Sum_probs=253.2

Q ss_pred             eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   90 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd   90 (361)
                      |||+++.+.++ +.+++.+.|++.++||+||+.++++|+.|+....+..+ ...|.++|+|++|+|+++|+++..|++||
T Consensus         1 ~~a~~~~~~~~-l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~-~~~~~~~g~~~~G~V~~~g~~v~~~~~Gd   78 (343)
T cd08236           1 MKALVLTGPGD-LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGA-YHPPLVLGHEFSGTVEEVGSGVDDLAVGD   78 (343)
T ss_pred             CeeEEEecCCc-eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCC-CCCCcccCcceEEEEEEECCCCCcCCCCC
Confidence            78999999876 99999999999999999999999999999988776542 34578899999999999999999999999


Q ss_pred             EEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCCh
Q 018072           91 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL  170 (361)
Q Consensus        91 ~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~  170 (361)
                      +|+..+...|+.|..|..++...|+.....   |.                   ...|+|++|+.+|.+.++++|+++++
T Consensus        79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~g~~~~~~~~~~~~~~~lP~~~~~  136 (343)
T cd08236          79 RVAVNPLLPCGKCEYCKKGEYSLCSNYDYI---GS-------------------RRDGAFAEYVSVPARNLIKIPDHVDY  136 (343)
T ss_pred             EEEEcCCCCCCCChhHHCcChhhCCCcceE---ec-------------------ccCCcccceEEechHHeEECcCCCCH
Confidence            999999999999999999999999875332   21                   12358999999999999999999999


Q ss_pred             hhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCC
Q 018072          171 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH  250 (361)
Q Consensus       171 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~  250 (361)
                      ++++++ .++.+||+++. ...++++++|+|+|+|.+|++++|+|+.+|...|+++++++++.++++++|++.++++...
T Consensus       137 ~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~~  214 (343)
T cd08236         137 EEAAMI-EPAAVALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKEE  214 (343)
T ss_pred             HHHHhc-chHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCccc
Confidence            999888 57889999874 7889999999999889999999999999999559999889999999999999888887653


Q ss_pred             CccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeec-Ch-hhhccccEEEEeeecCCC
Q 018072          251 DRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMT-KP-INVLNERTLKGTFFGNYK  327 (361)
Q Consensus       251 ~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~-~~-~~~~~~~~l~g~~~~~~~  327 (361)
                      .   .+.+....++ ++|++||++|+...+..++++|+++ |+++.+|.......+.. .. ..+.++.++.++......
T Consensus       215 ~---~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (343)
T cd08236         215 D---VEKVRELTEGRGADLVIEAAGSPATIEQALALARPG-GKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSA  290 (343)
T ss_pred             c---HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeecccc
Confidence            3   4455566665 7999999998877889999999998 99999996653322221 11 123488999888764322


Q ss_pred             --cCCcHHHHHHHHHcCCcc
Q 018072          328 --PRTDLPSVVDMYMNKVIR  345 (361)
Q Consensus       328 --~~~~~~~~~~~~~~~~l~  345 (361)
                        ..+.+++++++++++++.
T Consensus       291 ~~~~~~~~~~~~~~~~~~l~  310 (343)
T cd08236         291 PFPGDEWRTALDLLASGKIK  310 (343)
T ss_pred             ccchhhHHHHHHHHHcCCCC
Confidence              145678889999988874

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=8.4e-36  Score=282.82  Aligned_cols=285  Identities=20%  Similarity=0.253  Sum_probs=225.6

Q ss_pred             ccccceeEEEeecCCCC------eEEEEe---ecCC-CCCCeEEEEEeEEecCccchhccccCCCCCCCCccccc--cee
Q 018072            6 GLILTCKAAVAWEAGKP------LIIQDV---EVAP-PQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGH--EAA   73 (361)
Q Consensus         6 ~~~~~m~a~~~~~~~~~------~~~~~~---~~p~-~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~--e~~   73 (361)
                      ....++|.+++.+..+.      |++++.   +.|. +++|||||||.++++|+.|+..+.+.......|.++|+  |++
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~~~~   83 (348)
T PLN03154          4 GQVVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRIEGF   83 (348)
T ss_pred             CccccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCeeEee
Confidence            34566788888543211      777774   5653 47999999999999999987654432222345889998  789


Q ss_pred             EEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceee
Q 018072           74 GVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEY  153 (361)
Q Consensus        74 G~V~~~G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~  153 (361)
                      |+|+.+|++++.|++||+|+..                                                    |+|+||
T Consensus        84 G~v~~vg~~v~~~~~Gd~V~~~----------------------------------------------------~~~aey  111 (348)
T PLN03154         84 GVSKVVDSDDPNFKPGDLISGI----------------------------------------------------TGWEEY  111 (348)
T ss_pred             EEEEEEecCCCCCCCCCEEEec----------------------------------------------------CCcEEE
Confidence            9999999999999999999732                                                    379999


Q ss_pred             EEEeccc--eEE--CCCCCChh-hhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEc
Q 018072          154 TVVHSGC--VAK--INPLAPLD-KVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD  227 (361)
Q Consensus       154 v~v~~~~--~~~--iP~~~~~~-~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~  227 (361)
                      ++++.+.  +++  +|++++++ +++.+++++.|||+++.+..++++|++|||+|+ |++|++++|+|+++|+ +|++++
T Consensus       112 ~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~  190 (348)
T PLN03154        112 SLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSA  190 (348)
T ss_pred             EEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEc
Confidence            9998753  544  49999986 688899999999999878889999999999998 9999999999999999 899999


Q ss_pred             CChhhHHHHH-HcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCc-ee
Q 018072          228 RSSKRFEEAK-KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA-VF  305 (361)
Q Consensus       228 ~~~~~~~~~~-~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~-~~  305 (361)
                      ++++++++++ ++|+++++++.+.+ ++.+.++.++++++|++||++|+ ..+..++++++++ |+++.+|...... ..
T Consensus       191 ~~~~k~~~~~~~lGa~~vi~~~~~~-~~~~~i~~~~~~gvD~v~d~vG~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~  267 (348)
T PLN03154        191 GSSQKVDLLKNKLGFDEAFNYKEEP-DLDAALKRYFPEGIDIYFDNVGG-DMLDAALLNMKIH-GRIAVCGMVSLNSLSA  267 (348)
T ss_pred             CCHHHHHHHHHhcCCCEEEECCCcc-cHHHHHHHHCCCCcEEEEECCCH-HHHHHHHHHhccC-CEEEEECccccCCCCC
Confidence            9999999987 79999999986531 27777777766689999999998 6889999999998 9999999764321 11


Q ss_pred             ---ecChhh-hccccEEEEeeecCCC--cCCcHHHHHHHHHcCCccc
Q 018072          306 ---MTKPIN-VLNERTLKGTFFGNYK--PRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       306 ---~~~~~~-~~~~~~l~g~~~~~~~--~~~~~~~~~~~~~~~~l~~  346 (361)
                         .++... +.+++++.|++.+.+.  ..+.++++++++++|++++
T Consensus       268 ~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~  314 (348)
T PLN03154        268 SQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVY  314 (348)
T ss_pred             CCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccC
Confidence               112232 3489999998765432  1346788999999999854

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=100.00  E-value=1.8e-35  Score=278.92  Aligned_cols=302  Identities=31%  Similarity=0.464  Sum_probs=252.5

Q ss_pred             eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   90 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd   90 (361)
                      |||+++.++++ +++++.+.|+++++||+|||+++++|+.|+....|..+. .+|.++|+|++|+|+++|++++.+++||
T Consensus         1 ~~a~~~~~~~~-~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~-~~p~~~g~~~~G~v~~vG~~v~~~~~Gd   78 (334)
T cd08234           1 MKALVYEGPGE-LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA-APPLVPGHEFAGVVVAVGSKVTGFKVGD   78 (334)
T ss_pred             CeeEEecCCCc-eEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC-CCCcccccceEEEEEEeCCCCCCCCCCC
Confidence            78999999886 999999999999999999999999999999988776543 3688999999999999999999999999


Q ss_pred             EEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCCh
Q 018072           91 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL  170 (361)
Q Consensus        91 ~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~  170 (361)
                      +|++.+...|+.|..|..++.+.|......   |.                   ...|+|++|+.++.+.++++|+++++
T Consensus        79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~g~~~~~~~v~~~~~~~lP~~~~~  136 (334)
T cd08234          79 RVAVDPNIYCGECFYCRRGRPNLCENLTAV---GV-------------------TRNGGFAEYVVVPAKQVYKIPDNLSF  136 (334)
T ss_pred             EEEEcCCcCCCCCccccCcChhhCCCccee---cc-------------------CCCCcceeEEEecHHHcEECcCCCCH
Confidence            999999999999999999999999765322   11                   11258999999999999999999999


Q ss_pred             hhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCC
Q 018072          171 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH  250 (361)
Q Consensus       171 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~  250 (361)
                      .+++.+ .++.++++++ +.+++++|++|+|+|+|.+|.+++++|+..|.+.|+++++++++.+.++++|++.++++...
T Consensus       137 ~~aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~  214 (334)
T cd08234         137 EEAALA-EPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSRE  214 (334)
T ss_pred             HHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCCC
Confidence            998876 6788999986 78899999999999889999999999999998558999999999999999999888877655


Q ss_pred             CccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeecCCCcC
Q 018072          251 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKPR  329 (361)
Q Consensus       251 ~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~~~~~~  329 (361)
                      +  .... +...++++|++||+++....+..++++++++ |+++.+|.........+++..++ +++++.++...    .
T Consensus       215 ~--~~~~-~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~  286 (334)
T cd08234         215 D--PEAQ-KEDNPYGFDVVIEATGVPKTLEQAIEYARRG-GTVLVFGVYAPDARVSISPFEIFQKELTIIGSFIN----P  286 (334)
T ss_pred             C--HHHH-HHhcCCCCcEEEECCCChHHHHHHHHHHhcC-CEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccC----H
Confidence            4  3333 3333348999999998778889999999998 99999987653333444444444 78888877532    3


Q ss_pred             CcHHHHHHHHHcCCccc
Q 018072          330 TDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       330 ~~~~~~~~~~~~~~l~~  346 (361)
                      ..+++++++++++++..
T Consensus       287 ~~~~~~~~~~~~~~l~~  303 (334)
T cd08234         287 YTFPRAIALLESGKIDV  303 (334)
T ss_pred             HHHHHHHHHHHcCCCCh
Confidence            56889999999998753

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.3e-35  Score=279.02  Aligned_cols=299  Identities=30%  Similarity=0.494  Sum_probs=248.4

Q ss_pred             eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   90 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd   90 (361)
                      |||+++..+++.+.++++|.|.+.++||+|||+++++|++|+..+.|..+....|.++|||++|+|+++|++++.+++||
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd   80 (332)
T cd08259           1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKPGD   80 (332)
T ss_pred             CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCCCC
Confidence            78999987555699999999999999999999999999999999888665556688999999999999999999999999


Q ss_pred             EEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCCh
Q 018072           91 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL  170 (361)
Q Consensus        91 ~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~  170 (361)
                      +|+..++..|+.|.+|..+..+.|.+....   |..                   ..|+|++|++++.+.++++|+++++
T Consensus        81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~~~v~~~~~~~ip~~~~~  138 (332)
T cd08259          81 RVILYYYIPCGKCEYCLSGEENLCRNRAEY---GEE-------------------VDGGFAEYVKVPERSLVKLPDNVSD  138 (332)
T ss_pred             EEEECCCCCCcCChhhhCCCcccCCCcccc---ccc-------------------cCCeeeeEEEechhheEECCCCCCH
Confidence            999999999999999999999999874221   211                   1358999999999999999999999


Q ss_pred             hhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCC
Q 018072          171 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE  249 (361)
Q Consensus       171 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~  249 (361)
                      ++++.+++++.+||+++.. +.+.++++++|+|+ |++|++++++++..|. +|+++.+++++.+.++++|.+.+++..+
T Consensus       139 ~~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (332)
T cd08259         139 ESAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGSK  216 (332)
T ss_pred             HHHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEecHH
Confidence            9999999999999999766 88999999999997 9999999999999999 8888889999999998899877775433


Q ss_pred             CCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChh-hhccccEEEEeeecCCCc
Q 018072          250 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFGNYKP  328 (361)
Q Consensus       250 ~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~-~~~~~~~l~g~~~~~~~~  328 (361)
                          +.+.+....  ++|++++++|. .....++++++++ |+++.+|....... .++.. ..+++.++.++...   .
T Consensus       217 ----~~~~~~~~~--~~d~v~~~~g~-~~~~~~~~~~~~~-g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~  284 (332)
T cd08259         217 ----FSEDVKKLG--GADVVIELVGS-PTIEESLRSLNKG-GRLVLIGNVTPDPA-PLRPGLLILKEIRIIGSISA---T  284 (332)
T ss_pred             ----HHHHHHhcc--CCCEEEECCCh-HHHHHHHHHhhcC-CEEEEEcCCCCCCc-CCCHHHHHhCCcEEEEecCC---C
Confidence                444554443  79999999998 5678999999998 99999987542221 11222 22377787776422   2


Q ss_pred             CCcHHHHHHHHHcCCcc
Q 018072          329 RTDLPSVVDMYMNKVIR  345 (361)
Q Consensus       329 ~~~~~~~~~~~~~~~l~  345 (361)
                      ..++++++++++++.+.
T Consensus       285 ~~~~~~~~~~~~~~~l~  301 (332)
T cd08259         285 KADVEEALKLVKEGKIK  301 (332)
T ss_pred             HHHHHHHHHHHHcCCCc
Confidence            46788899999988874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.3e-35  Score=279.21  Aligned_cols=296  Identities=28%  Similarity=0.395  Sum_probs=247.3

Q ss_pred             eeEEEeecCCC----CeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCC
Q 018072           11 CKAAVAWEAGK----PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDL   86 (361)
Q Consensus        11 m~a~~~~~~~~----~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~   86 (361)
                      |||+++.+++.    ++++++.+.|.+.++||+||+.++++|++|+..+.|..+....|.++|||++|+|+++|+++..+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~   80 (329)
T cd08298           1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRF   80 (329)
T ss_pred             CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCC
Confidence            78999998883    48888998888999999999999999999999888766555678899999999999999999999


Q ss_pred             CCCCEEeecCC-CCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECC
Q 018072           87 EVGDHVLPVFT-GECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN  165 (361)
Q Consensus        87 ~~Gd~V~~~~~-~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP  165 (361)
                      ++||+|++.+. .+|+.|..|+.+..++|....+.   |..                   ..|+|++|+.++.+.++++|
T Consensus        81 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~~~~~~~~~~~lp  138 (329)
T cd08298          81 SVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFT---GYT-------------------VDGGYAEYMVADERFAYPIP  138 (329)
T ss_pred             cCCCEEEEeccCCCCCCChhHhCcChhhCCCcccc---ccc-------------------cCCceEEEEEecchhEEECC
Confidence            99999986544 58999999999999999876544   221                   12489999999999999999


Q ss_pred             CCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEE
Q 018072          166 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV  245 (361)
Q Consensus       166 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv  245 (361)
                      +++++.+++.+++++.|||+++ +.++++++++|+|+|+|++|++++++|+..|. +|++++.++++++.++++|++.++
T Consensus       139 ~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~  216 (329)
T cd08298         139 EDYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADWAG  216 (329)
T ss_pred             CCCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEe
Confidence            9999999999999999999997 88999999999999999999999999999998 899999999999999999998877


Q ss_pred             cCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecC
Q 018072          246 NTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN  325 (361)
Q Consensus       246 ~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~  325 (361)
                      +....           .++++|+++++.+....++.++++++++ |+++.+|.... ....++...+.++..+.++....
T Consensus       217 ~~~~~-----------~~~~vD~vi~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~  283 (329)
T cd08298         217 DSDDL-----------PPEPLDAAIIFAPVGALVPAALRAVKKG-GRVVLAGIHMS-DIPAFDYELLWGEKTIRSVANLT  283 (329)
T ss_pred             ccCcc-----------CCCcccEEEEcCCcHHHHHHHHHHhhcC-CEEEEEcCCCC-CCCccchhhhhCceEEEEecCCC
Confidence            65432           1237999999987778899999999998 99999985431 11122222234677777775332


Q ss_pred             CCcCCcHHHHHHHHHcCCccc
Q 018072          326 YKPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~l~~  346 (361)
                         .+.+++++++++++.++.
T Consensus       284 ---~~~~~~~~~l~~~~~l~~  301 (329)
T cd08298         284 ---RQDGEEFLKLAAEIPIKP  301 (329)
T ss_pred             ---HHHHHHHHHHHHcCCCCc
Confidence               357888899998887754

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=100.00  E-value=3e-35  Score=278.32  Aligned_cols=299  Identities=29%  Similarity=0.403  Sum_probs=245.1

Q ss_pred             ecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCC---CCCCCCcccccceeEEEEEeCCCCCCCCCCCEEe
Q 018072           17 WEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG---QTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVL   93 (361)
Q Consensus        17 ~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~   93 (361)
                      ++++.++++++.|.|.|.++|++|||.++++|++|+.++.+..   ...++|.++|+|++|+|+++|++++.|++||+|+
T Consensus         5 ~~~~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~   84 (340)
T TIGR00692         5 TKPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVS   84 (340)
T ss_pred             ccCCCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEE
Confidence            5677779999999999999999999999999999998765431   1234577899999999999999999999999999


Q ss_pred             ecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCChhhh
Q 018072           94 PVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKV  173 (361)
Q Consensus        94 ~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~~~a  173 (361)
                      ..+...|+.|..|..+..+.|.+.++.   |..                   ..|+|++|++++.+.++++|++++.+++
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~~~~~~~~~~~lp~~~~~~~a  142 (340)
T TIGR00692        85 VETHIVCGKCYACRRGQYHVCQNTKIF---GVD-------------------TDGCFAEYAVVPAQNIWKNPKSIPPEYA  142 (340)
T ss_pred             ECCcCCCCCChhhhCcChhhCcCcceE---eec-------------------CCCcceeEEEeehHHcEECcCCCChHhh
Confidence            999999999999999999999986543   211                   1248999999999999999999998655


Q ss_pred             hccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCcc
Q 018072          174 CILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRP  253 (361)
Q Consensus       174 a~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~  253 (361)
                       +++.++.+|++++  ...+++|++|+|.|+|++|++++|+|+.+|.+.|+++++++++.+.++++|++.++++...+  
T Consensus       143 -~~~~~~~~a~~~~--~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~--  217 (340)
T TIGR00692       143 -TIQEPLGNAVHTV--LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFKED--  217 (340)
T ss_pred             -hhcchHHHHHHHH--HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccccC--
Confidence             4566888998875  34578999999988899999999999999985588888899999999999998888876554  


Q ss_pred             HHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCCCcCCcH
Q 018072          254 IQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDL  332 (361)
Q Consensus       254 ~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~  332 (361)
                      +.+.+..++++ ++|++||++|+...+...+++|+++ |+++.+|.......+++....+++++++.+...  ....+.+
T Consensus       218 ~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  294 (340)
T TIGR00692       218 VVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG-GRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITG--RHMFETW  294 (340)
T ss_pred             HHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCC-CEEEEEccCCCCcccchhhhhhhcceEEEEEec--CCchhhH
Confidence            77788777765 8999999999878889999999998 999999976433333332233447888877652  2223567


Q ss_pred             HHHHHHHHcCCcc
Q 018072          333 PSVVDMYMNKVIR  345 (361)
Q Consensus       333 ~~~~~~~~~~~l~  345 (361)
                      .++++++++++++
T Consensus       295 ~~~~~~l~~~~l~  307 (340)
T TIGR00692       295 YTVSRLIQSGKLD  307 (340)
T ss_pred             HHHHHHHHcCCCC
Confidence            8899999998875

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=100.00  E-value=2.3e-35  Score=277.73  Aligned_cols=299  Identities=30%  Similarity=0.471  Sum_probs=249.0

Q ss_pred             eEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCE
Q 018072           12 KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDH   91 (361)
Q Consensus        12 ~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~   91 (361)
                      ||+++.++|..+++++.|.|.+.+++++||+.++++|++|+..+.+......+|.++|||++|+|+++|++++++++||+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~   80 (330)
T cd08245           1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVGDR   80 (330)
T ss_pred             CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccCCE
Confidence            68899999655999999999999999999999999999999988776544556889999999999999999999999999


Q ss_pred             EeecCC-CCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCCh
Q 018072           92 VLPVFT-GECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL  170 (361)
Q Consensus        92 V~~~~~-~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~  170 (361)
                      |++.+. .+|++|.+|+++.+++|.+..+.   +..                   ..|+|++|+.++.+.++++|+++++
T Consensus        81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~g~~~~~~~v~~~~~~~~p~~~~~  138 (330)
T cd08245          81 VGVGWLVGSCGRCEYCRRGLENLCQKAVNT---GYT-------------------TQGGYAEYMVADAEYTVLLPDGLPL  138 (330)
T ss_pred             EEEccccCCCCCChhhhCcCcccCcCcccc---Ccc-------------------cCCccccEEEEcHHHeEECCCCCCH
Confidence            987665 58999999999999999985544   210                   1248999999999999999999999


Q ss_pred             hhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCC
Q 018072          171 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH  250 (361)
Q Consensus       171 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~  250 (361)
                      ++++.+++.+.+||+++.. ..++++++|+|+|+|.+|++++++|+..|. +|+++++++++.++++++|++.+++....
T Consensus       139 ~~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~  216 (330)
T cd08245         139 AQAAPLLCAGITVYSALRD-AGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSGAE  216 (330)
T ss_pred             HHhhhhhhhHHHHHHHHHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccCCc
Confidence            9999999899999998744 789999999999988899999999999999 89999999999999999999888876543


Q ss_pred             CccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeecCCCcC
Q 018072          251 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKPR  329 (361)
Q Consensus       251 ~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~~~~~~  329 (361)
                      +  ....    ..+++|+++|++++......+++++++. |+++.+|..... ........++ ++.++.++..+.   .
T Consensus       217 ~--~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~-G~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~  285 (330)
T cd08245         217 L--DEQA----AAGGADVILVTVVSGAAAEAALGGLRRG-GRIVLVGLPESP-PFSPDIFPLIMKRQSIAGSTHGG---R  285 (330)
T ss_pred             c--hHHh----ccCCCCEEEECCCcHHHHHHHHHhcccC-CEEEEECCCCCC-ccccchHHHHhCCCEEEEeccCC---H
Confidence            3  2211    2247999999988778889999999998 999999865422 1111122233 888888887554   3


Q ss_pred             CcHHHHHHHHHcCCcc
Q 018072          330 TDLPSVVDMYMNKVIR  345 (361)
Q Consensus       330 ~~~~~~~~~~~~~~l~  345 (361)
                      ..++++++++.++.+.
T Consensus       286 ~~~~~~~~ll~~~~l~  301 (330)
T cd08245         286 ADLQEALDFAAEGKVK  301 (330)
T ss_pred             HHHHHHHHHHHcCCCc
Confidence            5788889999888875

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=100.00  E-value=1.6e-35  Score=280.04  Aligned_cols=281  Identities=21%  Similarity=0.261  Sum_probs=224.5

Q ss_pred             ceeEEEeecCCC-CeEEEEeec----CCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccce--eEEEEEeCC
Q 018072           10 TCKAAVAWEAGK-PLIIQDVEV----APPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEA--AGVVESVGE   81 (361)
Q Consensus        10 ~m~a~~~~~~~~-~~~~~~~~~----p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~--~G~V~~~G~   81 (361)
                      .+|++....+.. .|++++.++    |+|+++||||||++++||+.|++.+.|.... ...|+++|+++  .|.+..+|+
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~   86 (338)
T cd08295           7 ILKAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDS   86 (338)
T ss_pred             EEecCCCCCCCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEec
Confidence            466776544443 399999988    7899999999999999999999988875432 35688899865  455556788


Q ss_pred             CCCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEec-cc
Q 018072           82 GVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHS-GC  160 (361)
Q Consensus        82 ~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~-~~  160 (361)
                      .++.|++||+|+..                                                    |+|+||+++|. ..
T Consensus        87 ~v~~~~vGd~V~~~----------------------------------------------------g~~aey~~v~~~~~  114 (338)
T cd08295          87 GNPDFKVGDLVWGF----------------------------------------------------TGWEEYSLIPRGQD  114 (338)
T ss_pred             CCCCCCCCCEEEec----------------------------------------------------CCceeEEEecchhc
Confidence            88899999999732                                                    37999999999 79


Q ss_pred             eEECC-CCCChh-hhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 018072          161 VAKIN-PLAPLD-KVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK  237 (361)
Q Consensus       161 ~~~iP-~~~~~~-~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~  237 (361)
                      ++++| +++++. +++++++++.|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.++++
T Consensus       115 ~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~  193 (338)
T cd08295         115 LRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLK  193 (338)
T ss_pred             eeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence            99995 678876 788899999999999878889999999999998 9999999999999999 8999999999999999


Q ss_pred             H-cCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCcee----ecCh-hh
Q 018072          238 K-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVF----MTKP-IN  311 (361)
Q Consensus       238 ~-~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~----~~~~-~~  311 (361)
                      + +|+++++++.+.+ ++.+.++.++++++|++||++|+ ..+..++++++++ |+++.+|........    ..+. ..
T Consensus       194 ~~lGa~~vi~~~~~~-~~~~~i~~~~~~gvd~v~d~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~  270 (338)
T cd08295         194 NKLGFDDAFNYKEEP-DLDAALKRYFPNGIDIYFDNVGG-KMLDAVLLNMNLH-GRIAACGMISQYNLEWPEGVRNLLNI  270 (338)
T ss_pred             HhcCCceeEEcCCcc-cHHHHHHHhCCCCcEEEEECCCH-HHHHHHHHHhccC-cEEEEecccccCCCCCCCCccCHHHH
Confidence            8 9999999875431 26777777765689999999998 7889999999998 999999865432110    1112 22


Q ss_pred             hccccEEEEeeecCCCc--CCcHHHHHHHHHcCCccc
Q 018072          312 VLNERTLKGTFFGNYKP--RTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       312 ~~~~~~l~g~~~~~~~~--~~~~~~~~~~~~~~~l~~  346 (361)
                      +++++++.+++.+.+..  .+.++++++++.+++++.
T Consensus       271 ~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~  307 (338)
T cd08295         271 IYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKY  307 (338)
T ss_pred             hhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEc
Confidence            34888998876554321  234678889999998864

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=4.2e-35  Score=276.14  Aligned_cols=304  Identities=25%  Similarity=0.376  Sum_probs=251.9

Q ss_pred             eeEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 018072           11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE   87 (361)
Q Consensus        11 m~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~~~~   87 (361)
                      |||+++...+.+  +++++.+.|.+.+++|+||+.++++|++|+.++.|..+. ...|.++|||++|+|+++|+++..|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (342)
T cd08266           1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK   80 (342)
T ss_pred             CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence            789998844332  888888888899999999999999999999988775432 34578999999999999999999999


Q ss_pred             CCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072           88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  167 (361)
Q Consensus        88 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~  167 (361)
                      +||+|++.+..+|+.|.+|.++.++.|.+..+.   |..                   ..|+|++|+.++.+.++++|++
T Consensus        81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~-------------------~~g~~~~~~~~~~~~~~~~p~~  138 (342)
T cd08266          81 PGQRVVIYPGISCGRCEYCLAGRENLCAQYGIL---GEH-------------------VDGGYAEYVAVPARNLLPIPDN  138 (342)
T ss_pred             CCCEEEEccccccccchhhcccccccccccccc---ccc-------------------cCcceeEEEEechHHceeCCCC
Confidence            999999999999999999999999999864332   211                   1248999999999999999999


Q ss_pred             CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEc
Q 018072          168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  246 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~  246 (361)
                      +++++++.+++++.+||+++.+...++++++++|+|+ +.+|++++++++..|. +|+.+++++++.+.+.+++.+.+++
T Consensus       139 ~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~  217 (342)
T cd08266         139 LSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVID  217 (342)
T ss_pred             CCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEEe
Confidence            9999999999899999999878888999999999998 7999999999999999 7999999999999998888877776


Q ss_pred             CCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecCh-hhhccccEEEEeeec
Q 018072          247 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFFG  324 (361)
Q Consensus       247 ~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~~~~~~l~g~~~~  324 (361)
                      ....+  +.+.+...+.+ ++|++++++|. ..+..++++++++ |+++.+|..... ...++. ..+.+++++.++...
T Consensus       218 ~~~~~--~~~~~~~~~~~~~~d~~i~~~g~-~~~~~~~~~l~~~-G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  292 (342)
T cd08266         218 YRKED--FVREVRELTGKRGVDVVVEHVGA-ATWEKSLKSLARG-GRLVTCGATTGY-EAPIDLRHVFWRQLSILGSTMG  292 (342)
T ss_pred             cCChH--HHHHHHHHhCCCCCcEEEECCcH-HHHHHHHHHhhcC-CEEEEEecCCCC-CCCcCHHHHhhcceEEEEEecC
Confidence            55433  55666666655 89999999998 6788999999998 999999876532 223333 224488888887643


Q ss_pred             CCCcCCcHHHHHHHHHcCCcc
Q 018072          325 NYKPRTDLPSVVDMYMNKVIR  345 (361)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~l~  345 (361)
                      .   ...+.+++++++++.+.
T Consensus       293 ~---~~~~~~~~~~l~~~~l~  310 (342)
T cd08266         293 T---KAELDEALRLVFRGKLK  310 (342)
T ss_pred             C---HHHHHHHHHHHHcCCcc
Confidence            3   35788889999888764

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=100.00  E-value=4.4e-35  Score=276.92  Aligned_cols=298  Identities=27%  Similarity=0.415  Sum_probs=239.0

Q ss_pred             EeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccc-cCCC--CCCCCcccccceeEEEEEeCCCCCCCCCCCE
Q 018072           15 VAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE-SKGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDH   91 (361)
Q Consensus        15 ~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~-g~~~--~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~   91 (361)
                      ++++.++ +++++.+.|.+.++||+|||.++++|++|+.... +...  ...+|.++|+|++|+|+++|+++++|++||+
T Consensus         2 ~~~~~~~-~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~   80 (339)
T cd08232           2 VIHAAGD-LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQR   80 (339)
T ss_pred             eeccCCc-eEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCE
Confidence            4667776 9999999999999999999999999999987763 3221  1245779999999999999999999999999


Q ss_pred             EeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCChh
Q 018072           92 VLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLD  171 (361)
Q Consensus        92 V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~~  171 (361)
                      |++.+..+|+.|.+|..|+.+.|.+..+.   |....              ..+..|+|+||++++.+.++++|++++.+
T Consensus        81 V~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~--------------~~~~~g~~~~~v~v~~~~~~~iP~~~~~~  143 (339)
T cd08232          81 VAVNPSRPCGTCDYCRAGRPNLCLNMRFL---GSAMR--------------FPHVQGGFREYLVVDASQCVPLPDGLSLR  143 (339)
T ss_pred             EEEccCCcCCCChHHhCcCcccCccccce---eeccc--------------cCCCCCceeeEEEechHHeEECcCCCCHH
Confidence            99999999999999999999999875332   11000              00123589999999999999999999999


Q ss_pred             hhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCC
Q 018072          172 KVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD  251 (361)
Q Consensus       172 ~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~  251 (361)
                      +++. ..++.++|+++.+...+ ++++|||.|+|.+|++++|+|+.+|..+|+++++++++.++++++|+++++++...+
T Consensus       144 ~aa~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~~  221 (339)
T cd08232         144 RAAL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARDP  221 (339)
T ss_pred             Hhhh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCchh
Confidence            8876 46888999987555556 999999998899999999999999986799999999999999999999988875533


Q ss_pred             ccHHHHHHHHc-C-CCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhh-hccccEEEEeeecCCCc
Q 018072          252 RPIQEVIAEMT-N-GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKP  328 (361)
Q Consensus       252 ~~~~~~i~~~~-~-~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~l~g~~~~~~~~  328 (361)
                        +    ..+. . +++|+++|++|+...++.++++|+++ |+++.+|....  ....++.. +.+++++.+....    
T Consensus       222 --~----~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~----  288 (339)
T cd08232         222 --L----AAYAADKGDFDVVFEASGAPAALASALRVVRPG-GTVVQVGMLGG--PVPLPLNALVAKELDLRGSFRF----  288 (339)
T ss_pred             --h----hhhhccCCCccEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCC--CccCcHHHHhhcceEEEEEecC----
Confidence              2    2222 2 26999999999767889999999998 99999986542  22223333 3388888776522    


Q ss_pred             CCcHHHHHHHHHcCCcc
Q 018072          329 RTDLPSVVDMYMNKVIR  345 (361)
Q Consensus       329 ~~~~~~~~~~~~~~~l~  345 (361)
                      .+.+++++++++++++.
T Consensus       289 ~~~~~~~~~~~~~~~i~  305 (339)
T cd08232         289 DDEFAEAVRLLAAGRID  305 (339)
T ss_pred             HHHHHHHHHHHHcCCCC
Confidence            35788999999998874

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=100.00  E-value=6.5e-35  Score=274.38  Aligned_cols=274  Identities=20%  Similarity=0.241  Sum_probs=221.2

Q ss_pred             ceeEEEeecC--CCC----eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCC
Q 018072           10 TCKAAVAWEA--GKP----LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGV   83 (361)
Q Consensus        10 ~m~a~~~~~~--~~~----~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v   83 (361)
                      +||||++.+.  +++    +++++.|.|+|+++||+|||.++|||+.|......   ..++|.++|+|++|+|++   .+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~---~~~~p~v~G~e~~G~V~~---~~   75 (329)
T cd08294           2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR---LNEGDTMIGTQVAKVIES---KN   75 (329)
T ss_pred             CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc---CCCCCcEecceEEEEEec---CC
Confidence            6999999983  343    88999999999999999999999999987653211   124688999999999995   44


Q ss_pred             CCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEecc---c
Q 018072           84 SDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG---C  160 (361)
Q Consensus        84 ~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~---~  160 (361)
                      +.|++||+|+..                                                    ++|++|++++.+   .
T Consensus        76 ~~~~~Gd~V~~~----------------------------------------------------~~~~~~~~~~~~~~~~  103 (329)
T cd08294          76 SKFPVGTIVVAS----------------------------------------------------FGWRTHTVSDGKDQPD  103 (329)
T ss_pred             CCCCCCCEEEee----------------------------------------------------CCeeeEEEECCccccc
Confidence            679999999832                                                    268999999999   9


Q ss_pred             eEECCCCCC-----hhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 018072          161 VAKINPLAP-----LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE  234 (361)
Q Consensus       161 ~~~iP~~~~-----~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~  234 (361)
                      ++++|++++     ...++.+++++.|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+
T Consensus       104 ~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~  182 (329)
T cd08294         104 LYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVA  182 (329)
T ss_pred             eEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHH
Confidence            999999987     12334677899999999878899999999999986 9999999999999999 8999999999999


Q ss_pred             HHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCce--e---ec-C
Q 018072          235 EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV--F---MT-K  308 (361)
Q Consensus       235 ~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~--~---~~-~  308 (361)
                      +++++|+++++++.+.+  +.+.++.++++++|++||++|+ ..+..++++++++ |+++.+|.......  .   .. .
T Consensus       183 ~l~~~Ga~~vi~~~~~~--~~~~v~~~~~~gvd~vld~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~  258 (329)
T cd08294         183 WLKELGFDAVFNYKTVS--LEEALKEAAPDGIDCYFDNVGG-EFSSTVLSHMNDF-GRVAVCGSISTYNDKEPKKGPYVQ  258 (329)
T ss_pred             HHHHcCCCEEEeCCCcc--HHHHHHHHCCCCcEEEEECCCH-HHHHHHHHhhccC-CEEEEEcchhccCCCCCCcCcccH
Confidence            99999999999987665  7778877776689999999998 7889999999998 99999985432111  1   11 1


Q ss_pred             hhhhccccEEEEeeecCCC--cCCcHHHHHHHHHcCCccc
Q 018072          309 PINVLNERTLKGTFFGNYK--PRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       309 ~~~~~~~~~l~g~~~~~~~--~~~~~~~~~~~~~~~~l~~  346 (361)
                      ...+++++++.+++...+.  ..+.++++++++++++++.
T Consensus       259 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~  298 (329)
T cd08294         259 ETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKY  298 (329)
T ss_pred             HHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcC
Confidence            1234488999887654431  1234678889999998864

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.3e-34  Score=274.77  Aligned_cols=292  Identities=26%  Similarity=0.298  Sum_probs=232.5

Q ss_pred             eeEEEeecCCCC--eEEEE-eecCCCCCCeEEEEEeEEecCccchhccccCCC--------------------CCCCCcc
Q 018072           11 CKAAVAWEAGKP--LIIQD-VEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ--------------------TPLFPRI   67 (361)
Q Consensus        11 m~a~~~~~~~~~--~~~~~-~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~--------------------~~~~p~~   67 (361)
                      |||+++.+++.+  +.+.+ .+.|.|.+++|+|||.++++|++|+.++.|..+                    ...+|.+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~   80 (350)
T cd08274           1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI   80 (350)
T ss_pred             CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence            789998876643  55544 477788999999999999999999998776432                    2346889


Q ss_pred             cccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCc
Q 018072           68 FGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGT  147 (361)
Q Consensus        68 ~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~  147 (361)
                      +|||++|+|+++|+++++|++||+|++.+...|+.|..|.     .|.   ..   |.. .                  .
T Consensus        81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~-----~~~---~~---~~~-~------------------~  130 (350)
T cd08274          81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPA-----DID---YI---GSE-R------------------D  130 (350)
T ss_pred             cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccc-----ccc---cc---CCC-C------------------C
Confidence            9999999999999999999999999998888888776542     121   11   110 1                  1


Q ss_pred             ccceeeEEEeccceEECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEE
Q 018072          148 STFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV  226 (361)
Q Consensus       148 G~~ae~v~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~  226 (361)
                      |+|++|+.++.+.++++|+++++.+++.+++++.|||+++ ...++++|++|||+|+ |++|++++++|+++|+ +|+++
T Consensus       131 g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~vi~~  208 (350)
T cd08274         131 GGFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAV  208 (350)
T ss_pred             ccceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCC-EEEEE
Confidence            4899999999999999999999999999999999999986 7788999999999998 9999999999999999 68888


Q ss_pred             cCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCcee
Q 018072          227 DRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVF  305 (361)
Q Consensus       227 ~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~  305 (361)
                      +.++ +++.++++|++.+++.....  +.+  ...+.+ ++|++||++|+ ..+..++++++++ |+++.+|... ....
T Consensus       209 ~~~~-~~~~~~~~g~~~~~~~~~~~--~~~--~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~-~~~~  280 (350)
T cd08274         209 AGAA-KEEAVRALGADTVILRDAPL--LAD--AKALGGEPVDVVADVVGG-PLFPDLLRLLRPG-GRYVTAGAIA-GPVV  280 (350)
T ss_pred             eCch-hhHHHHhcCCeEEEeCCCcc--HHH--HHhhCCCCCcEEEecCCH-HHHHHHHHHhccC-CEEEEecccC-Cccc
Confidence            7665 88888999997665543332  333  344444 89999999998 6889999999998 9999998653 2223


Q ss_pred             ecChhh-hccccEEEEeeecCCCcCCcHHHHHHHHHcCCcc
Q 018072          306 MTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIR  345 (361)
Q Consensus       306 ~~~~~~-~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l~  345 (361)
                      .++... +.+++++.++....   .+.++++++++.+++++
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~l~  318 (350)
T cd08274         281 ELDLRTLYLKDLTLFGSTLGT---REVFRRLVRYIEEGEIR  318 (350)
T ss_pred             cCCHHHhhhcceEEEEeecCC---HHHHHHHHHHHHCCCcc
Confidence            444444 34899999887543   46789999999988874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=100.00  E-value=1.2e-34  Score=272.52  Aligned_cols=263  Identities=18%  Similarity=0.239  Sum_probs=213.7

Q ss_pred             eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCC
Q 018072           23 LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGD  102 (361)
Q Consensus        23 ~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~c~~  102 (361)
                      +++.+.|.|+|++|||||||.++|+|+.++.   |.+.....|.++|.|++|+|++.|+   .|++||+|+..       
T Consensus        19 l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~-------   85 (325)
T TIGR02825        19 FELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKRLKEGDTMMGQQVARVVESKNV---ALPKGTIVLAS-------   85 (325)
T ss_pred             eEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCcCCCCCcEecceEEEEEEeCCC---CCCCCCEEEEe-------
Confidence            8889999999999999999999999997653   3333334578999999999999774   59999999832       


Q ss_pred             CccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEEC----CCCCChhhh-hccc
Q 018072          103 CRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI----NPLAPLDKV-CILS  177 (361)
Q Consensus       103 c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~i----P~~~~~~~a-a~l~  177 (361)
                                                                   ++|++|+.++.+.+.++    |++++++++ ++++
T Consensus        86 ---------------------------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~  120 (325)
T TIGR02825        86 ---------------------------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVG  120 (325)
T ss_pred             ---------------------------------------------cCceeeEEechhheEEccccccCCCCHHHHHHhcc
Confidence                                                         16899999999988888    899999887 6788


Q ss_pred             cchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHH
Q 018072          178 CGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQE  256 (361)
Q Consensus       178 ~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~  256 (361)
                      +++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.++++++|++.++++.+.+ .+.+
T Consensus       121 ~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~-~~~~  198 (325)
T TIGR02825       121 MPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKTVK-SLEE  198 (325)
T ss_pred             cHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeccccc-cHHH
Confidence            899999999888899999999999996 9999999999999999 899999999999999999999999887532 2556


Q ss_pred             HHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCc---eee---cChhhhccccEEEEeeecCCC---
Q 018072          257 VIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA---VFM---TKPINVLNERTLKGTFFGNYK---  327 (361)
Q Consensus       257 ~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~---~~~---~~~~~~~~~~~l~g~~~~~~~---  327 (361)
                      .++...++++|++||++|+ ..+..++++++++ |+++.+|......   ..+   .....+++++++.++....+.   
T Consensus       199 ~~~~~~~~gvdvv~d~~G~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  276 (325)
T TIGR02825       199 TLKKASPDGYDCYFDNVGG-EFSNTVIGQMKKF-GRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEV  276 (325)
T ss_pred             HHHHhCCCCeEEEEECCCH-HHHHHHHHHhCcC-cEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhh
Confidence            6666655589999999998 5679999999998 9999998654211   111   111234488898887654332   


Q ss_pred             cCCcHHHHHHHHHcCCcccC
Q 018072          328 PRTDLPSVVDMYMNKVIRFS  347 (361)
Q Consensus       328 ~~~~~~~~~~~~~~~~l~~~  347 (361)
                      ..+.++++++++++|++++.
T Consensus       277 ~~~~~~~~~~l~~~g~l~~~  296 (325)
T TIGR02825       277 RQKALKELLKWVLEGKIQYK  296 (325)
T ss_pred             hHHHHHHHHHHHHCCCcccc
Confidence            13467889999999998653

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08293 PTGR2 Prostaglandin reductase

Probab=100.00  E-value=1.7e-34  Score=273.56  Aligned_cols=269  Identities=17%  Similarity=0.202  Sum_probs=207.6

Q ss_pred             eEEEEeecCCCC-CCeEEEEEeEEecCccchhccc---cCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCC
Q 018072           23 LIIQDVEVAPPQ-AMEVRIKIKYTSLCRTDLYFWE---SKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTG   98 (361)
Q Consensus        23 ~~~~~~~~p~~~-~~evlVkv~~~~i~~~D~~~~~---g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~   98 (361)
                      +++++.|.|+|. ++||||||.++|||+.|+....   +.....++|.++|||++|+|+++|+++++|++||+|+..   
T Consensus        23 ~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~---   99 (345)
T cd08293          23 FRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSF---   99 (345)
T ss_pred             eEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEec---
Confidence            889999999874 9999999999999999864322   111123467899999999999999999999999999732   


Q ss_pred             CCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCChhh----hh
Q 018072           99 ECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK----VC  174 (361)
Q Consensus        99 ~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~~~----aa  174 (361)
                                               +                       ++|+||+++|++.++++|++++.++    ++
T Consensus       100 -------------------------~-----------------------~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a  131 (345)
T cd08293         100 -------------------------N-----------------------WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLG  131 (345)
T ss_pred             -------------------------C-----------------------CCceeEEEecHHHeEEcCccccccchhHHhh
Confidence                                     0                       2699999999999999999864432    44


Q ss_pred             ccccchhhhhhhhhhhcCCCCC--CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCEEEcCCCC
Q 018072          175 ILSCGVSTGLGATLNVAKPERG--SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEH  250 (361)
Q Consensus       175 ~l~~~~~ta~~a~~~~~~~~~g--~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~vv~~~~~  250 (361)
                      .++.++.|||+++.+.+++++|  ++|||+|+ |++|++++|+|+++|+.+|+++++++++.+++++ +|+++++++.+.
T Consensus       132 ~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~  211 (345)
T cd08293         132 AVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTD  211 (345)
T ss_pred             hcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCC
Confidence            5677899999998777888877  99999998 9999999999999998679999999999999876 999999988765


Q ss_pred             CccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCC---cee--ecC--hhhhc--cccEEEEe
Q 018072          251 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD---AVF--MTK--PINVL--NERTLKGT  321 (361)
Q Consensus       251 ~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~---~~~--~~~--~~~~~--~~~~l~g~  321 (361)
                      +  +.+.++.++++++|++||++|+ ..+..++++|+++ |+++.+|.....   ...  .+.  ...+.  +++++.+.
T Consensus       212 ~--~~~~i~~~~~~gvd~vid~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (345)
T cd08293         212 N--VAERLRELCPEGVDVYFDNVGG-EISDTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERF  287 (345)
T ss_pred             C--HHHHHHHHCCCCceEEEECCCc-HHHHHHHHHhccC-CEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEE
Confidence            5  7788888776689999999998 4679999999998 999999853311   111  111  11112  34444333


Q ss_pred             eecCCC--cCCcHHHHHHHHHcCCccc
Q 018072          322 FFGNYK--PRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       322 ~~~~~~--~~~~~~~~~~~~~~~~l~~  346 (361)
                      ....+.  ..+.++++++++++++++.
T Consensus       288 ~~~~~~~~~~~~~~~~~~l~~~g~i~~  314 (345)
T cd08293         288 LVLNYKDKFEEAIAQLSQWVKEGKLKV  314 (345)
T ss_pred             EeeccHhHHHHHHHHHHHHHHCCCccc
Confidence            222211  1234567788999998754

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=100.00  E-value=2.8e-34  Score=271.54  Aligned_cols=284  Identities=23%  Similarity=0.308  Sum_probs=231.7

Q ss_pred             eeEEEeecCCCC---eEEEEeecCCCCC-CeEEEEEeEEecCccchhccccCCCCC-C----CCcccccceeEEEEEeCC
Q 018072           11 CKAAVAWEAGKP---LIIQDVEVAPPQA-MEVRIKIKYTSLCRTDLYFWESKGQTP-L----FPRIFGHEAAGVVESVGE   81 (361)
Q Consensus        11 m~a~~~~~~~~~---~~~~~~~~p~~~~-~evlVkv~~~~i~~~D~~~~~g~~~~~-~----~p~~~G~e~~G~V~~~G~   81 (361)
                      |||+++.+++.+   +.+++.|.|+|.+ +||+||+.++|+|++|+..+.|..+.. .    .|.++|||++|+|+++|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~   80 (341)
T cd08290           1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS   80 (341)
T ss_pred             CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence            899999999875   8999999999888 999999999999999999887754321 2    577999999999999999


Q ss_pred             CCCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccce
Q 018072           82 GVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCV  161 (361)
Q Consensus        82 ~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~  161 (361)
                      ++..|++||+|+....                                                +.|+|++|+.++.+.+
T Consensus        81 ~v~~~~~Gd~V~~~~~------------------------------------------------~~g~~~~~~~v~~~~~  112 (341)
T cd08290          81 GVKSLKPGDWVIPLRP------------------------------------------------GLGTWRTHAVVPADDL  112 (341)
T ss_pred             CCCCCCCCCEEEecCC------------------------------------------------CCccchheEeccHHHe
Confidence            9999999999985421                                                0248999999999999


Q ss_pred             EECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCh----hhHHHH
Q 018072          162 AKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS----KRFEEA  236 (361)
Q Consensus       162 ~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~----~~~~~~  236 (361)
                      +++|+++++++++.+++++.|||+++.....+++|++|||+|+ |++|++++|+|++.|+ +++++..++    ++.+.+
T Consensus       113 ~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~  191 (341)
T cd08290         113 IKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGI-KTINVVRDRPDLEELKERL  191 (341)
T ss_pred             EeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCC-eEEEEEcCCCcchhHHHHH
Confidence            9999999999999999999999999877788999999999987 9999999999999999 677766655    678888


Q ss_pred             HHcCCCEEEcCCCC-CccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhh-hcc
Q 018072          237 KKFGVTDFVNTSEH-DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLN  314 (361)
Q Consensus       237 ~~~G~~~vv~~~~~-~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~  314 (361)
                      +++|+++++++... ...+.+.+..+.++++|++||++|+ ..+..++++++++ |+++.+|..... ...++... +.+
T Consensus       192 ~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~  268 (341)
T cd08290         192 KALGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVGG-KSATELARLLSPG-GTMVTYGGMSGQ-PVTVPTSLLIFK  268 (341)
T ss_pred             HhcCCCEEEeCcccccccHHHHHHHHcCCCceEEEECcCc-HhHHHHHHHhCCC-CEEEEEeccCCC-CcccCHHHHhhC
Confidence            89999999887653 0126667776665589999999998 5667889999998 999999865422 23333323 448


Q ss_pred             ccEEEEeeecCCC---cC----CcHHHHHHHHHcCCccc
Q 018072          315 ERTLKGTFFGNYK---PR----TDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       315 ~~~l~g~~~~~~~---~~----~~~~~~~~~~~~~~l~~  346 (361)
                      +.++.+.......   .+    ..++++++++.++++..
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  307 (341)
T cd08290         269 DITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKA  307 (341)
T ss_pred             CceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccC
Confidence            9999988765432   11    24778889999988754

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=8.9e-34  Score=267.51  Aligned_cols=279  Identities=19%  Similarity=0.181  Sum_probs=225.4

Q ss_pred             eEEEeecC---CCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCC
Q 018072           12 KAAVAWEA---GKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDL   86 (361)
Q Consensus        12 ~a~~~~~~---~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~   86 (361)
                      ||+++.++   +.+  +++.++|.|+|+++||+|||+++++|++|..++.+..+..++|.++|+|++|+|+++|++++.|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~   80 (336)
T TIGR02817         1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLF   80 (336)
T ss_pred             CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence            57777775   433  8888999999999999999999999999998887765545678899999999999999999999


Q ss_pred             CCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCC
Q 018072           87 EVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP  166 (361)
Q Consensus        87 ~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~  166 (361)
                      ++||+|+....                                              ....|+|++|++++.+.++++|+
T Consensus        81 ~~Gd~V~~~~~----------------------------------------------~~~~g~~~~~~~v~~~~~~~ip~  114 (336)
T TIGR02817        81 KPGDEVWYAGD----------------------------------------------IDRPGSNAEFHLVDERIVGHKPK  114 (336)
T ss_pred             CCCCEEEEcCC----------------------------------------------CCCCCcccceEEEcHHHcccCCC
Confidence            99999984310                                              00124899999999999999999


Q ss_pred             CCChhhhhccccchhhhhhhhhhhcCCCC-----CCEEEEEcC-CHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHHc
Q 018072          167 LAPLDKVCILSCGVSTGLGATLNVAKPER-----GSSVAVFGL-GAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKF  239 (361)
Q Consensus       167 ~~~~~~aa~l~~~~~ta~~a~~~~~~~~~-----g~~VlI~G~-g~vG~~a~~~a~~~-g~~~Vi~~~~~~~~~~~~~~~  239 (361)
                      ++++++++.+++++.|||+++.+..++.+     |++|||+|+ |++|++++|+|+.+ |+ +|+++.+++++.++++++
T Consensus       115 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~  193 (336)
T TIGR02817       115 SLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLEL  193 (336)
T ss_pred             CCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHc
Confidence            99999999999999999999877788877     999999987 99999999999998 88 899999999999999999


Q ss_pred             CCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEE
Q 018072          240 GVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTL  318 (361)
Q Consensus       240 G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l  318 (361)
                      |+++++++.. +  +.+.++.+.++++|+++|++++...+..++++++++ |+++.++..   ..++  ...+. +++++
T Consensus       194 g~~~~~~~~~-~--~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-G~~v~~~~~---~~~~--~~~~~~~~~~~  264 (336)
T TIGR02817       194 GAHHVIDHSK-P--LKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQ-GRFALIDDP---AELD--ISPFKRKSISL  264 (336)
T ss_pred             CCCEEEECCC-C--HHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccC-CEEEEEccc---cccc--chhhhhcceEE
Confidence            9999988654 3  667777754448999999987768889999999998 999988532   1222  22233 55766


Q ss_pred             EEeeecC--CC-c------CCcHHHHHHHHHcCCccc
Q 018072          319 KGTFFGN--YK-P------RTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       319 ~g~~~~~--~~-~------~~~~~~~~~~~~~~~l~~  346 (361)
                      .+..+..  .. .      ...++++++++.+++++.
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~  301 (336)
T TIGR02817       265 HWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRT  301 (336)
T ss_pred             EEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeec
Confidence            6543321  11 0      134678889999988753

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=8.5e-34  Score=258.57  Aligned_cols=269  Identities=32%  Similarity=0.500  Sum_probs=224.8

Q ss_pred             eEEEEEeEEecCccchhccccCCC-CCCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCc
Q 018072           37 EVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD  115 (361)
Q Consensus        37 evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~  115 (361)
                      ||+|||.++++|+.|+..+.+..+ ...+|.++|||++|+|+++|++++.|++||+|+..+...|+.|..|..    .|.
T Consensus         1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~~   76 (271)
T cd05188           1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LCP   76 (271)
T ss_pred             CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hCC
Confidence            689999999999999999887654 345688999999999999999999999999999999999999999997    676


Q ss_pred             ccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCChhhhhccccchhhhhhhhhhhcCCCC
Q 018072          116 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER  195 (361)
Q Consensus       116 ~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~  195 (361)
                      ...+.   +                   ....|+|++|+.++.+.++++|+++++++++.++.++.+||+++.+...+++
T Consensus        77 ~~~~~---~-------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~  134 (271)
T cd05188          77 GGGIL---G-------------------EGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKP  134 (271)
T ss_pred             CCCEe---c-------------------cccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCC
Confidence            54433   1                   1123589999999999999999999999999998999999999877777799


Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCC-CccEEEEccC
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG  274 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g  274 (361)
                      +++|+|+|+|++|++++++++..|. +|+++++++++.+.++++|++.+++....+  ..+.+. ...+ ++|+++++++
T Consensus       135 ~~~vli~g~~~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~-~~~~~~~d~vi~~~~  210 (271)
T cd05188         135 GDTVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYKEED--LEEELR-LTGGGGADVVIDAVG  210 (271)
T ss_pred             CCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCCcCC--HHHHHH-HhcCCCCCEEEECCC
Confidence            9999999986699999999999997 899999999999999999998888776554  555555 4444 8999999999


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCCCcCCcHHHHHHHH
Q 018072          275 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMY  339 (361)
Q Consensus       275 ~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~  339 (361)
                      +...+..++++++++ |+++.+|..............+.+++++.++..+.+   ++++++++++
T Consensus       211 ~~~~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~  271 (271)
T cd05188         211 GPETLAQALRLLRPG-GRIVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTR---EDFEEALDLL  271 (271)
T ss_pred             CHHHHHHHHHhcccC-CEEEEEccCCCCCCcccHHHHHhcceEEEEeecCCH---HHHHHHHhhC
Confidence            867788999999998 999999977644333333333459999999987654   5788777653

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=4.6e-33  Score=262.03  Aligned_cols=298  Identities=28%  Similarity=0.350  Sum_probs=242.3

Q ss_pred             eeEEEeecCC--CCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 018072           11 CKAAVAWEAG--KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE   87 (361)
Q Consensus        11 m~a~~~~~~~--~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~~~~   87 (361)
                      |||+++...+  +.+++++.+.|.+.++|++||+.++++|++|+....+..+. ...|.++|||++|+|+++|+.+.+++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (336)
T cd08276           1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK   80 (336)
T ss_pred             CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence            7999999664  23888888888899999999999999999999987765432 34688999999999999999999999


Q ss_pred             CCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072           88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  167 (361)
Q Consensus        88 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~  167 (361)
                      +||+|++.....|..|..      +.|......   |                   .+..|+|++|+.++.+.++++|++
T Consensus        81 ~Gd~V~~~~~~~~~~~~~------~~~~~~~~~---~-------------------~~~~g~~~~~~~~~~~~~~~lp~~  132 (336)
T cd08276          81 VGDRVVPTFFPNWLDGPP------TAEDEASAL---G-------------------GPIDGVLAEYVVLPEEGLVRAPDH  132 (336)
T ss_pred             CCCEEEEecccccccccc------ccccccccc---c-------------------cccCceeeeEEEecHHHeEECCCC
Confidence            999999876665544333      333211111   1                   111348999999999999999999


Q ss_pred             CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcC
Q 018072          168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  247 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~  247 (361)
                      +++.+++.+++++.+||+++.+...+++|++|+|+|+|++|++++++|++.|+ +|++++.++++++.++++|++.+++.
T Consensus       133 ~~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~  211 (336)
T cd08276         133 LSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINY  211 (336)
T ss_pred             CCHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcC
Confidence            99999999999999999998777889999999999889999999999999999 79999999999999999999998886


Q ss_pred             CC-CCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhh-hccccEEEEeeec
Q 018072          248 SE-HDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFG  324 (361)
Q Consensus       248 ~~-~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~l~g~~~~  324 (361)
                      .. .+  +.+.+..++++ ++|+++|+++. ..+..+++++++. |+++.+|....... ...... +.+++++.++..+
T Consensus       212 ~~~~~--~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~  286 (336)
T cd08276         212 RTTPD--WGEEVLKLTGGRGVDHVVEVGGP-GTLAQSIKAVAPG-GVISLIGFLSGFEA-PVLLLPLLTKGATLRGIAVG  286 (336)
T ss_pred             CcccC--HHHHHHHHcCCCCCcEEEECCCh-HHHHHHHHhhcCC-CEEEEEccCCCCcc-CcCHHHHhhcceEEEEEecC
Confidence            55 33  67778888776 89999999986 6788999999998 99999997653322 222233 4489999988765


Q ss_pred             CCCcCCcHHHHHHHHHcCCcc
Q 018072          325 NYKPRTDLPSVVDMYMNKVIR  345 (361)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~l~  345 (361)
                      .   .+.++++++++.++.+.
T Consensus       287 ~---~~~~~~~~~l~~~~~l~  304 (336)
T cd08276         287 S---RAQFEAMNRAIEAHRIR  304 (336)
T ss_pred             c---HHHHHHHHHHHHcCCcc
Confidence            4   46788889999877764

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=100.00  E-value=5.1e-33  Score=261.47  Aligned_cols=238  Identities=26%  Similarity=0.339  Sum_probs=210.7

Q ss_pred             ceeEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 018072           10 TCKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLE   87 (361)
Q Consensus        10 ~m~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~   87 (361)
                      +|||+++.++|.+  +++++++.|.|.++||+|||.++|+|++|+.+..+.++....|.++|||++|+|+++|+++..++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~   80 (327)
T PRK10754          1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIK   80 (327)
T ss_pred             CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCC
Confidence            4999999988765  88999999999999999999999999999998877665555688999999999999999999999


Q ss_pred             CCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072           88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  167 (361)
Q Consensus        88 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~  167 (361)
                      +||+|+....                                                +.|+|++|+.++.+.++++|++
T Consensus        81 ~Gd~V~~~~~------------------------------------------------~~g~~~~~v~v~~~~~~~lp~~  112 (327)
T PRK10754         81 VGDRVVYAQS------------------------------------------------ALGAYSSVHNVPADKAAILPDA  112 (327)
T ss_pred             CCCEEEECCC------------------------------------------------CCcceeeEEEcCHHHceeCCCC
Confidence            9999973210                                                0148999999999999999999


Q ss_pred             CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEc
Q 018072          168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  246 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~  246 (361)
                      +++++++.++.++.+||+++.+...+.+|++|+|+|+ |.+|++++|+|+.+|+ +|++++.+++++++++++|++.+++
T Consensus       113 ~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~  191 (327)
T PRK10754        113 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVIN  191 (327)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEc
Confidence            9999999988899999998877788999999999976 9999999999999999 7999999999999999999988887


Q ss_pred             CCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072          247 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       247 ~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      ....+  +.+.++.++++ ++|++||++++ ..+..++++++++ |+++.+|...
T Consensus       192 ~~~~~--~~~~~~~~~~~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~  242 (327)
T PRK10754        192 YREEN--IVERVKEITGGKKVRVVYDSVGK-DTWEASLDCLQRR-GLMVSFGNAS  242 (327)
T ss_pred             CCCCc--HHHHHHHHcCCCCeEEEEECCcH-HHHHHHHHHhccC-CEEEEEccCC
Confidence            76544  77788888876 89999999998 6788899999998 9999999764

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=100.00  E-value=1.5e-32  Score=257.54  Aligned_cols=281  Identities=21%  Similarity=0.239  Sum_probs=230.2

Q ss_pred             eeEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC---CCCCcccccceeEEEEEeCCCCCC
Q 018072           11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT---PLFPRIFGHEAAGVVESVGEGVSD   85 (361)
Q Consensus        11 m~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~---~~~p~~~G~e~~G~V~~~G~~v~~   85 (361)
                      |||+++++++.+  +++.+.+.|.+.+++|+|||.++++|++|+....|..+.   ...|.++|||++|+|+++|+++..
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~   80 (324)
T cd08244           1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP   80 (324)
T ss_pred             CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence            789999876653  677777878889999999999999999999888775432   345788999999999999999999


Q ss_pred             CCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECC
Q 018072           86 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN  165 (361)
Q Consensus        86 ~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP  165 (361)
                      +++||+|+....                                               ...|+|++|+.++.+.++++|
T Consensus        81 ~~~Gd~V~~~~~-----------------------------------------------~~~g~~~~~~~v~~~~~~~lp  113 (324)
T cd08244          81 AWLGRRVVAHTG-----------------------------------------------RAGGGYAELAVADVDSLHPVP  113 (324)
T ss_pred             CCCCCEEEEccC-----------------------------------------------CCCceeeEEEEEchHHeEeCC
Confidence            999999985421                                               002489999999999999999


Q ss_pred             CCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEE
Q 018072          166 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF  244 (361)
Q Consensus       166 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~v  244 (361)
                      +++++++++.+++++.||| ++.+...++++++|+|+|+ |.+|++++++|+..|+ +|+++++++++.+.++++|++.+
T Consensus       114 ~~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~  191 (324)
T cd08244         114 DGLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVA  191 (324)
T ss_pred             CCCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEE
Confidence            9999999999999999995 5577888999999999996 9999999999999999 89999999999999999999888


Q ss_pred             EcCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhh-hccccEEEEee
Q 018072          245 VNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTF  322 (361)
Q Consensus       245 v~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~l~g~~  322 (361)
                      ++....+  +.+.+..++++ ++|+++|++|+. ....+++++++. |+++.+|...... ..++... +.+++++.++.
T Consensus       192 ~~~~~~~--~~~~~~~~~~~~~~d~vl~~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~  266 (324)
T cd08244         192 VDYTRPD--WPDQVREALGGGGVTVVLDGVGGA-IGRAALALLAPG-GRFLTYGWASGEW-TALDEDDARRRGVTVVGLL  266 (324)
T ss_pred             EecCCcc--HHHHHHHHcCCCCceEEEECCChH-hHHHHHHHhccC-cEEEEEecCCCCC-CccCHHHHhhCCcEEEEee
Confidence            8776554  67777777766 899999999985 568999999998 9999999765332 2444333 34889998877


Q ss_pred             ecCCCc---CCcHHHHHHHHHcCCcc
Q 018072          323 FGNYKP---RTDLPSVVDMYMNKVIR  345 (361)
Q Consensus       323 ~~~~~~---~~~~~~~~~~~~~~~l~  345 (361)
                      ......   .+.+++++++++++++.
T Consensus       267 ~~~~~~~~~~~~~~~~~~~l~~~~l~  292 (324)
T cd08244         267 GVQAERGGLRALEARALAEAAAGRLV  292 (324)
T ss_pred             cccCCHHHHHHHHHHHHHHHHCCCcc
Confidence            544321   24567788888888764

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-32  Score=257.51  Aligned_cols=283  Identities=21%  Similarity=0.272  Sum_probs=229.3

Q ss_pred             ceeEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCC-CCCCCcccccceeEEEEEeCCCCCCC
Q 018072           10 TCKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDL   86 (361)
Q Consensus        10 ~m~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~v~~~   86 (361)
                      ||||+++.+++..  +.+++.+.|.+.++|++|||.++++|+.|+....+..+ ....|.++|||++|+|+++|+++..+
T Consensus         1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~   80 (334)
T PTZ00354          1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRF   80 (334)
T ss_pred             CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence            6999999988763  67778888888999999999999999999988876543 23456789999999999999999999


Q ss_pred             CCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCC
Q 018072           87 EVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP  166 (361)
Q Consensus        87 ~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~  166 (361)
                      ++||+|+...                               .                  .|+|++|+.++.+.++++|+
T Consensus        81 ~~Gd~V~~~~-------------------------------~------------------~g~~~~~~~v~~~~~~~ip~  111 (334)
T PTZ00354         81 KEGDRVMALL-------------------------------P------------------GGGYAEYAVAHKGHVMHIPQ  111 (334)
T ss_pred             CCCCEEEEec-------------------------------C------------------CCceeeEEEecHHHcEeCCC
Confidence            9999998431                               0                  13899999999999999999


Q ss_pred             CCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEE
Q 018072          167 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV  245 (361)
Q Consensus       167 ~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv  245 (361)
                      +++..+++.+++++.+||+++.+...+++|++|+|+|+ |.+|++++++|++.|+ .++.+.+++++.+.++++|++.++
T Consensus       112 ~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~  190 (334)
T PTZ00354        112 GYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGA-ATIITTSSEEKVDFCKKLAAIILI  190 (334)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEE
Confidence            99999999999999999999877788999999999996 9999999999999999 667788999999999999998888


Q ss_pred             cCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeee
Q 018072          246 NTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFF  323 (361)
Q Consensus       246 ~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~  323 (361)
                      +....+ .+.+.+..++++ ++|++||++++ ..+..++++++++ |+++.+|........+++...++ ++.++.++..
T Consensus       191 ~~~~~~-~~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (334)
T PTZ00354        191 RYPDEE-GFAPKVKKLTGEKGVNLVLDCVGG-SYLSETAEVLAVD-GKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTL  267 (334)
T ss_pred             ecCChh-HHHHHHHHHhCCCCceEEEECCch-HHHHHHHHHhccC-CeEEEEecCCCCcccccCHHHHHhhCCEEEeeec
Confidence            765432 256667777765 89999999987 7889999999998 99999986543221114433334 7778888765


Q ss_pred             cCCCc--C-----CcHHHHHHHHHcCCcc
Q 018072          324 GNYKP--R-----TDLPSVVDMYMNKVIR  345 (361)
Q Consensus       324 ~~~~~--~-----~~~~~~~~~~~~~~l~  345 (361)
                      .....  .     +.+++++++++++.+.
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  296 (334)
T PTZ00354        268 RSRSDEYKADLVASFEREVLPYMEEGEIK  296 (334)
T ss_pred             cccchhhhHHHHHHHHHHHHHHHHCCCcc
Confidence            44221  0     1236677888888764

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=100.00  E-value=2.2e-32  Score=257.32  Aligned_cols=280  Identities=25%  Similarity=0.317  Sum_probs=230.1

Q ss_pred             ceeEEEeecCCC----CeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCC
Q 018072           10 TCKAAVAWEAGK----PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVS   84 (361)
Q Consensus        10 ~m~a~~~~~~~~----~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~   84 (361)
                      .|||+++.+++.    ++++++++.|.|.++|++|||.++|+|++|+.+..|..+. ..+|.++|||++|+|+++|++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~   80 (329)
T cd08250           1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVT   80 (329)
T ss_pred             CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCC
Confidence            399999998766    3889999999999999999999999999999988775542 45788999999999999999999


Q ss_pred             CCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEEC
Q 018072           85 DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI  164 (361)
Q Consensus        85 ~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~i  164 (361)
                      .+++||+|+...                                                  .|+|++|+.++.+.++++
T Consensus        81 ~~~~Gd~V~~~~--------------------------------------------------~g~~~s~~~v~~~~~~~i  110 (329)
T cd08250          81 DFKVGDAVATMS--------------------------------------------------FGAFAEYQVVPARHAVPV  110 (329)
T ss_pred             CCCCCCEEEEec--------------------------------------------------CcceeEEEEechHHeEEC
Confidence            999999998531                                                  148999999999999999


Q ss_pred             CCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCE
Q 018072          165 NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD  243 (361)
Q Consensus       165 P~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~  243 (361)
                      |++  ..+++.++.++.|||+++.+...+++|++|+|+|+ |.+|++++|+|++.|+ +|+++.+++++.+.++++|++.
T Consensus       111 p~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~  187 (329)
T cd08250         111 PEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDR  187 (329)
T ss_pred             CCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCce
Confidence            997  34677888899999999877788999999999996 9999999999999999 7999989999999999999988


Q ss_pred             EEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCC---------ceeecChhhhcc
Q 018072          244 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD---------AVFMTKPINVLN  314 (361)
Q Consensus       244 vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~---------~~~~~~~~~~~~  314 (361)
                      +++....+  +.+.+..+.++++|++||++|+ ..+..++++++++ |+++.+|.....         ....+....+.+
T Consensus       188 v~~~~~~~--~~~~~~~~~~~~vd~v~~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (329)
T cd08250         188 PINYKTED--LGEVLKKEYPKGVDVVYESVGG-EMFDTCVDNLALK-GRLIVIGFISGYQSGTGPSPVKGATLPPKLLAK  263 (329)
T ss_pred             EEeCCCcc--HHHHHHHhcCCCCeEEEECCcH-HHHHHHHHHhccC-CeEEEEecccCCcccCcccccccccccHHHhhc
Confidence            88765544  6666666555589999999997 7889999999998 999999876532         111223333448


Q ss_pred             ccEEEEeeecCCC--cCCcHHHHHHHHHcCCccc
Q 018072          315 ERTLKGTFFGNYK--PRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       315 ~~~l~g~~~~~~~--~~~~~~~~~~~~~~~~l~~  346 (361)
                      ++++.++......  ..+.+.++++++.++.++.
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  297 (329)
T cd08250         264 SASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVC  297 (329)
T ss_pred             CceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeee
Confidence            8999887654321  1345678888888887754

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=100.00  E-value=1.7e-32  Score=242.15  Aligned_cols=268  Identities=18%  Similarity=0.246  Sum_probs=219.2

Q ss_pred             eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeC--CCCCCCCCCCEEeecCCCCC
Q 018072           23 LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVG--EGVSDLEVGDHVLPVFTGEC  100 (361)
Q Consensus        23 ~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G--~~v~~~~~Gd~V~~~~~~~c  100 (361)
                      +++++.++|+|++||||||+++.|+++..+..++- .++.-.|+-+|..++|.++...  |+...|++||.|...     
T Consensus        27 F~lee~~vp~p~~GqvLl~~~ylS~DPymRgrm~d-~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~-----  100 (340)
T COG2130          27 FRLEEVDVPEPGEGQVLLRTLYLSLDPYMRGRMSD-APSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGV-----  100 (340)
T ss_pred             ceeEeccCCCCCcCceEEEEEEeccCHHHeecccC-CcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEec-----
Confidence            99999999999999999999999999965544332 2334457777877655444322  667889999999833     


Q ss_pred             CCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCCh--hhhhcccc
Q 018072          101 GDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPL--DKVCILSC  178 (361)
Q Consensus       101 ~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~--~~aa~l~~  178 (361)
                                               .                      +|+||.+++.+.+.|+++..-+  .....+..
T Consensus       101 -------------------------~----------------------GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGm  133 (340)
T COG2130         101 -------------------------S----------------------GWQEYAISDGEGLRKLDPSPAPLSAYLGVLGM  133 (340)
T ss_pred             -------------------------c----------------------cceEEEeechhhceecCCCCCCcchHHhhcCC
Confidence                                     2                      7999999999999999865322  23344677


Q ss_pred             chhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCEEEcCCCCCccHHH
Q 018072          179 GVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQE  256 (361)
Q Consensus       179 ~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~vv~~~~~~~~~~~  256 (361)
                      +..|||.+|++..++|+|++|+|.+| |++|..+.|+||..|. +|+++...++|.+++.+ +|.|..+||+.++  +.+
T Consensus       134 pG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d--~~~  210 (340)
T COG2130         134 PGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKAED--FAQ  210 (340)
T ss_pred             chHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCccc--HHH
Confidence            99999999999999999999999987 9999999999999999 99999999999999988 9999999999987  999


Q ss_pred             HHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecC--h---hhhc-cccEEEEeeecC-CCc-
Q 018072          257 VIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK--P---INVL-NERTLKGTFFGN-YKP-  328 (361)
Q Consensus       257 ~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~--~---~~~~-~~~~l~g~~~~~-~~~-  328 (361)
                      .+++..+.|+|+.||++|+ +.+++.+..|+.. +|+.+||..++......+  +   ..++ +++++.|+...+ +.. 
T Consensus       211 ~L~~a~P~GIDvyfeNVGg-~v~DAv~~~ln~~-aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~  288 (340)
T COG2130         211 ALKEACPKGIDVYFENVGG-EVLDAVLPLLNLF-ARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQR  288 (340)
T ss_pred             HHHHHCCCCeEEEEEcCCc-hHHHHHHHhhccc-cceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhh
Confidence            9999999999999999999 8999999999997 999999976644322111  1   1233 899999998733 321 


Q ss_pred             -CCcHHHHHHHHHcCCcccCC
Q 018072          329 -RTDLPSVVDMYMNKVIRFSS  348 (361)
Q Consensus       329 -~~~~~~~~~~~~~~~l~~~~  348 (361)
                       ++..+++..|+++|||+..+
T Consensus       289 ~~e~~~~l~~wv~~GKi~~~e  309 (340)
T COG2130         289 FPEALRELGGWVKEGKIQYRE  309 (340)
T ss_pred             hHHHHHHHHHHHHcCceeeEe
Confidence             34568899999999997654

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=100.00  E-value=3.2e-32  Score=257.57  Aligned_cols=243  Identities=28%  Similarity=0.376  Sum_probs=206.7

Q ss_pred             eeEEEeecCC-CCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018072           11 CKAAVAWEAG-KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (361)
Q Consensus        11 m~a~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~G   89 (361)
                      |||+++..++ ..+++++.+.|+|+++||+|||.++++|++|+....+.. ....|.++|||++|+|+.+|++++.+++|
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~~~~~G   79 (339)
T cd08249           1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF-IPSYPAILGCDFAGTVVEVGSGVTRFKVG   79 (339)
T ss_pred             CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc-ccCCCceeeeeeeEEEEEeCCCcCcCCCC
Confidence            7899999884 238899999999999999999999999999998775543 12357789999999999999999999999


Q ss_pred             CEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCC
Q 018072           90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP  169 (361)
Q Consensus        90 d~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~  169 (361)
                      |+|+..+...|+            +                             ....|+|++|++++.+.++++|++++
T Consensus        80 d~V~~~~~~~~~------------~-----------------------------~~~~g~~~~~~~v~~~~~~~ip~~~~  118 (339)
T cd08249          80 DRVAGFVHGGNP------------N-----------------------------DPRNGAFQEYVVADADLTAKIPDNIS  118 (339)
T ss_pred             CEEEEEeccccC------------C-----------------------------CCCCCcccceEEechhheEECCCCCC
Confidence            999966433221            0                             01124899999999999999999999


Q ss_pred             hhhhhccccchhhhhhhhhhhcCC----------CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH
Q 018072          170 LDKVCILSCGVSTGLGATLNVAKP----------ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK  238 (361)
Q Consensus       170 ~~~aa~l~~~~~ta~~a~~~~~~~----------~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~  238 (361)
                      +++++.+++++.|||+++.+..++          .++++|+|+|+ |.+|++++++|+++|+ +|+.+. ++++.+.+++
T Consensus       119 ~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~~~  196 (339)
T cd08249         119 FEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLVKS  196 (339)
T ss_pred             HHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHHHh
Confidence            999999999999999997666544          78999999997 8999999999999999 787776 5689999999


Q ss_pred             cCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcC--CCcEEEEEcCCC
Q 018072          239 FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHD--GWGVAVLVGVPS  300 (361)
Q Consensus       239 ~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~--~~G~iv~~g~~~  300 (361)
                      +|++++++....+  +.+.++.++++++|++||++|++..+..+++++++  + |+++.+|...
T Consensus       197 ~g~~~v~~~~~~~--~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~-g~~v~~g~~~  257 (339)
T cd08249         197 LGADAVFDYHDPD--VVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGG-GKLVSLLPVP  257 (339)
T ss_pred             cCCCEEEECCCch--HHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCC-CEEEEecCCC
Confidence            9999998876654  77778777767899999999986788999999999  8 9999998765

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=100.00  E-value=1.1e-31  Score=253.03  Aligned_cols=281  Identities=19%  Similarity=0.200  Sum_probs=228.8

Q ss_pred             eeEEEeecCCCC-----eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCC
Q 018072           11 CKAAVAWEAGKP-----LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSD   85 (361)
Q Consensus        11 m~a~~~~~~~~~-----~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~   85 (361)
                      |||+++.++++.     +.+++++.|++.+++|+||+.++++|++|+..+.+..+..+.|.++|||++|+|+++|+++..
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~   80 (336)
T cd08252           1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTL   80 (336)
T ss_pred             CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCC
Confidence            689999998863     556677888889999999999999999999887775544456778999999999999999999


Q ss_pred             CCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECC
Q 018072           86 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN  165 (361)
Q Consensus        86 ~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP  165 (361)
                      |++||+|+....                            .                  ...|+|++|+.++.+.++++|
T Consensus        81 ~~~Gd~V~~~~~----------------------------~------------------~~~g~~~~~~~v~~~~~~~ip  114 (336)
T cd08252          81 FKVGDEVYYAGD----------------------------I------------------TRPGSNAEYQLVDERIVGHKP  114 (336)
T ss_pred             CCCCCEEEEcCC----------------------------C------------------CCCccceEEEEEchHHeeeCC
Confidence            999999985310                            0                  012489999999999999999


Q ss_pred             CCCChhhhhccccchhhhhhhhhhhcCCCC-----CCEEEEEcC-CHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHH
Q 018072          166 PLAPLDKVCILSCGVSTGLGATLNVAKPER-----GSSVAVFGL-GAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK  238 (361)
Q Consensus       166 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~-----g~~VlI~G~-g~vG~~a~~~a~~~g-~~~Vi~~~~~~~~~~~~~~  238 (361)
                      ++++.++++.+++++.+||+++.+.+.+.+     |++|+|+|+ |++|++++|+|+.+| . +|++++.++++.+++++
T Consensus       115 ~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~  193 (336)
T cd08252         115 KSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKE  193 (336)
T ss_pred             CCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHh
Confidence            999999999999999999999877788877     999999986 999999999999999 6 89999999999999999


Q ss_pred             cCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh-ccccE
Q 018072          239 FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERT  317 (361)
Q Consensus       239 ~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~  317 (361)
                      +|++.+++... +  +.+.+.....+++|++||++|++..+..++++++++ |+++.+|...  .  .++...+ .++++
T Consensus       194 ~g~~~~~~~~~-~--~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~v~~g~~~--~--~~~~~~~~~~~~~  265 (336)
T cd08252         194 LGADHVINHHQ-D--LAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQ-GHICLIVDPQ--E--PLDLGPLKSKSAS  265 (336)
T ss_pred             cCCcEEEeCCc-c--HHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCC-CEEEEecCCC--C--cccchhhhcccce
Confidence            99998887653 3  555665444348999999999778899999999998 9999998653  2  2333334 48888


Q ss_pred             EEEeeecCCC--c-------CCcHHHHHHHHHcCCccc
Q 018072          318 LKGTFFGNYK--P-------RTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       318 l~g~~~~~~~--~-------~~~~~~~~~~~~~~~l~~  346 (361)
                      +.+..+....  .       ...++++++++.++.++.
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  303 (336)
T cd08252         266 FHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKT  303 (336)
T ss_pred             EEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEec
Confidence            8876654311  1       123677889998888764

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=100.00  E-value=1.5e-31  Score=250.71  Aligned_cols=269  Identities=23%  Similarity=0.337  Sum_probs=226.1

Q ss_pred             eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCC
Q 018072           23 LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECG  101 (361)
Q Consensus        23 ~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~c~  101 (361)
                      +++++.|.|.+.+++|+|||+++++|+.|..++.+.... ..+|.++|||++|+|+++|++++.+++||+|+..+.    
T Consensus        14 ~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~----   89 (323)
T cd05282          14 LELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG----   89 (323)
T ss_pred             EEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC----
Confidence            667788888899999999999999999999888765432 346789999999999999999999999999985421    


Q ss_pred             CCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCChhhhhccccchh
Q 018072          102 DCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVS  181 (361)
Q Consensus       102 ~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~~~aa~l~~~~~  181 (361)
                                                                   .|+|++|+.++.+.++++|+++++.+++.++++..
T Consensus        90 ---------------------------------------------~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~  124 (323)
T cd05282          90 ---------------------------------------------EGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPL  124 (323)
T ss_pred             ---------------------------------------------CCcceeEEecCHHHeEECCCCCCHHHHHHHhccHH
Confidence                                                         13899999999999999999999999999988999


Q ss_pred             hhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHH
Q 018072          182 TGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAE  260 (361)
Q Consensus       182 ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~  260 (361)
                      +||+++.+...+.+|++|+|+|+ |.+|++++|+|+++|+ .|+++.+++++++.++++|++.++++...+  +.+.+..
T Consensus       125 ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~  201 (323)
T cd05282         125 TAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSSPED--LAQRVKE  201 (323)
T ss_pred             HHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEecccchh--HHHHHHH
Confidence            99999877788899999999987 8999999999999999 788888999999999999999988876544  6777777


Q ss_pred             HcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeecCCCc-------CCc
Q 018072          261 MTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKP-------RTD  331 (361)
Q Consensus       261 ~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~~~~~-------~~~  331 (361)
                      ++++ ++|++||++|+ .....++++++++ |+++.+|..... ...++...+. +++++.++....+..       .+.
T Consensus       202 ~~~~~~~d~vl~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (323)
T cd05282         202 ATGGAGARLALDAVGG-ESATRLARSLRPG-GTLVNYGLLSGE-PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQET  278 (323)
T ss_pred             HhcCCCceEEEECCCC-HHHHHHHHhhCCC-CEEEEEccCCCC-CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHH
Confidence            7776 89999999998 4567889999998 999999876543 3344445455 899999887665421       134


Q ss_pred             HHHHHHHHHcCCccc
Q 018072          332 LPSVVDMYMNKVIRF  346 (361)
Q Consensus       332 ~~~~~~~~~~~~l~~  346 (361)
                      +++++++++++++..
T Consensus       279 ~~~~~~~l~~~~l~~  293 (323)
T cd05282         279 FAEVIKLVEAGVLTT  293 (323)
T ss_pred             HHHHHHHHhCCCccc
Confidence            677888888888753

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.3e-31  Score=249.08  Aligned_cols=267  Identities=25%  Similarity=0.304  Sum_probs=217.1

Q ss_pred             eeEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 018072           11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV   88 (361)
Q Consensus        11 m~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~   88 (361)
                      |||+++.+.+ +  +++++.+.|.+.++||+|||.++++|+.|+....+    ...|.++|||++|+|+++|+++..|++
T Consensus         1 ~~~~~~~~~~-~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~----~~~~~~~g~e~~G~v~~~G~~v~~~~~   75 (305)
T cd08270           1 MRALVVDPDA-PLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAE----RPDGAVPGWDAAGVVERAAADGSGPAV   75 (305)
T ss_pred             CeEEEEccCC-CceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhcc----CCCCCcccceeEEEEEEeCCCCCCCCC
Confidence            6899998754 3  77779999999999999999999999999887552    223678999999999999999999999


Q ss_pred             CCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCC
Q 018072           89 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA  168 (361)
Q Consensus        89 Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~  168 (361)
                      ||+|+...                                                 ..|+|++|+.++.+.++++|+++
T Consensus        76 Gd~V~~~~-------------------------------------------------~~g~~~~~~~v~~~~~~~ip~~~  106 (305)
T cd08270          76 GARVVGLG-------------------------------------------------AMGAWAELVAVPTGWLAVLPDGV  106 (305)
T ss_pred             CCEEEEec-------------------------------------------------CCcceeeEEEEchHHeEECCCCC
Confidence            99998431                                                 01489999999999999999999


Q ss_pred             ChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcC
Q 018072          169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  247 (361)
Q Consensus       169 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~  247 (361)
                      ++++++.+++++.|||+++.+.... +|++|+|+|+ |++|++++++|+..|+ +|+.+++++++++.++++|++.+++.
T Consensus       107 ~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~  184 (305)
T cd08270         107 SFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVG  184 (305)
T ss_pred             CHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEec
Confidence            9999999999999999997655544 5999999998 9999999999999999 89999999999999999998765543


Q ss_pred             CCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc---cccEEEEeeec
Q 018072          248 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL---NERTLKGTFFG  324 (361)
Q Consensus       248 ~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~---~~~~l~g~~~~  324 (361)
                      ..          .+.++++|+++|++|+ ..+..++++++.+ |+++.+|... .....++...+.   ++.++.++..+
T Consensus       185 ~~----------~~~~~~~d~vl~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (305)
T cd08270         185 GS----------ELSGAPVDLVVDSVGG-PQLARALELLAPG-GTVVSVGSSS-GEPAVFNPAAFVGGGGGRRLYTFFLY  251 (305)
T ss_pred             cc----------cccCCCceEEEECCCc-HHHHHHHHHhcCC-CEEEEEeccC-CCcccccHHHHhcccccceEEEEEcc
Confidence            22          1122479999999998 5789999999998 9999999765 222333333333   48889888765


Q ss_pred             C-CCcCCcHHHHHHHHHcCCccc
Q 018072          325 N-YKPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       325 ~-~~~~~~~~~~~~~~~~~~l~~  346 (361)
                      . ......++.++++++++++..
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~i~~  274 (305)
T cd08270         252 DGEPLAADLARLLGLVAAGRLDP  274 (305)
T ss_pred             CHHHHHHHHHHHHHHHHCCCccc
Confidence            3 112356788889999998863

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=100.00  E-value=2.1e-31  Score=249.84  Aligned_cols=263  Identities=21%  Similarity=0.245  Sum_probs=211.8

Q ss_pred             eeEEEeecCCC--CeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 018072           11 CKAAVAWEAGK--PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE   87 (361)
Q Consensus        11 m~a~~~~~~~~--~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~~~~   87 (361)
                      |||+++.+++.  +++++++|.|+|+++||+|||.++++|++|+.++.|..+. ..+|.++|||++|+|+++  +++.++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~   78 (325)
T cd05280           1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR   78 (325)
T ss_pred             CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence            79999999885  5999999999999999999999999999999988775432 345789999999999998  457899


Q ss_pred             CCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072           88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  167 (361)
Q Consensus        88 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~  167 (361)
                      +||+|+..+..                        .|+                   ...|+|++|+.++.+.++++|++
T Consensus        79 ~Gd~V~~~~~~------------------------~g~-------------------~~~g~~~~~~~v~~~~~~~lp~~  115 (325)
T cd05280          79 EGDEVLVTGYD------------------------LGM-------------------NTDGGFAEYVRVPADWVVPLPEG  115 (325)
T ss_pred             CCCEEEEcccc------------------------cCC-------------------CCCceeEEEEEEchhhEEECCCC
Confidence            99999864210                        011                   11248999999999999999999


Q ss_pred             CChhhhhccccchhhhhhhhhhhc--CCC-CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCE
Q 018072          168 APLDKVCILSCGVSTGLGATLNVA--KPE-RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD  243 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~~~~--~~~-~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~  243 (361)
                      +++++++.+++++.++|+++....  ++. .+++|+|+|+ |.+|++++|+|+.+|+ +|+++++++++++.++++|++.
T Consensus       116 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~  194 (325)
T cd05280         116 LSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGASE  194 (325)
T ss_pred             CCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcE
Confidence            999999999999999999875443  335 4579999998 9999999999999999 7999999999999999999998


Q ss_pred             EEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh-ccccEEEEee
Q 018072          244 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTF  322 (361)
Q Consensus       244 vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~l~g~~  322 (361)
                      +++....   ..+..+....+++|++||++++ ..+..++++++++ |+++.+|..... ...+++..+ .+++++.++.
T Consensus       195 ~~~~~~~---~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~  268 (325)
T cd05280         195 VLDREDL---LDESKKPLLKARWAGAIDTVGG-DVLANLLKQTKYG-GVVASCGNAAGP-ELTTTVLPFILRGVSLLGID  268 (325)
T ss_pred             EEcchhH---HHHHHHHhcCCCccEEEECCch-HHHHHHHHhhcCC-CEEEEEecCCCC-ccccccchheeeeeEEEEEE
Confidence            8875432   1122233333489999999998 6889999999998 999999976532 223344444 4899999877


Q ss_pred             ecC
Q 018072          323 FGN  325 (361)
Q Consensus       323 ~~~  325 (361)
                      ...
T Consensus       269 ~~~  271 (325)
T cd05280         269 SVN  271 (325)
T ss_pred             eec
Confidence            554

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.6e-31  Score=246.86  Aligned_cols=272  Identities=24%  Similarity=0.317  Sum_probs=219.7

Q ss_pred             ecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhcc-ccCCC--CCCCCcccccceeEEEEEeCCCCCCCCCCCEEe
Q 018072           17 WEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFW-ESKGQ--TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVL   93 (361)
Q Consensus        17 ~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~-~g~~~--~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~   93 (361)
                      .++++ +++++++.|++.++||+|||.++++|++|+..+ .+...  .+.+|.++|+|++|+|+++|++++.+++||+|+
T Consensus         2 ~~~~~-~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~   80 (312)
T cd08269           2 TGPGR-FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVA   80 (312)
T ss_pred             CCCCe-eEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEE
Confidence            34555 999999999999999999999999999999887 55432  123478999999999999999999999999998


Q ss_pred             ecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCChhhh
Q 018072           94 PVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKV  173 (361)
Q Consensus        94 ~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~~~a  173 (361)
                      ...                                                  .|+|++|+.++.+.++++|+++  ..+
T Consensus        81 ~~~--------------------------------------------------~g~~~~~~~v~~~~~~~lP~~~--~~~  108 (312)
T cd08269          81 GLS--------------------------------------------------GGAFAEYDLADADHAVPLPSLL--DGQ  108 (312)
T ss_pred             Eec--------------------------------------------------CCcceeeEEEchhheEECCCch--hhh
Confidence            542                                                  1389999999999999999998  233


Q ss_pred             hccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCcc
Q 018072          174 CILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRP  253 (361)
Q Consensus       174 a~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~  253 (361)
                      +.+..++.++++++. ..++++|++|+|+|+|.+|++++|+|+..|.+.|+++.+++++.++++++|++.+++....+  
T Consensus       109 ~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--  185 (312)
T cd08269         109 AFPGEPLGCALNVFR-RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDSEA--  185 (312)
T ss_pred             HHhhhhHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCCcC--
Confidence            333367889998864 78899999999998899999999999999994499999999999999999998888765444  


Q ss_pred             HHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhh-hccccEEEEeeecCC-CcCC
Q 018072          254 IQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNY-KPRT  330 (361)
Q Consensus       254 ~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~l~g~~~~~~-~~~~  330 (361)
                      +.+.+..++.+ ++|+++|++|+...+..++++|+++ |+++.+|... .....+++.. .++++++.++..... ...+
T Consensus       186 ~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~-g~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (312)
T cd08269         186 IVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAER-GRLVIFGYHQ-DGPRPVPFQTWNWKGIDLINAVERDPRIGLE  263 (312)
T ss_pred             HHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEccCC-CCCcccCHHHHhhcCCEEEEecccCccchhh
Confidence            77788877776 8999999998877889999999998 9999998754 2223333332 348888877654332 1235


Q ss_pred             cHHHHHHHHHcCCccc
Q 018072          331 DLPSVVDMYMNKVIRF  346 (361)
Q Consensus       331 ~~~~~~~~~~~~~l~~  346 (361)
                      .++++++++++++++.
T Consensus       264 ~~~~~~~~~~~~~l~~  279 (312)
T cd08269         264 GMREAVKLIADGRLDL  279 (312)
T ss_pred             HHHHHHHHHHcCCCCc
Confidence            7889999999998764

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=3.5e-31  Score=247.47  Aligned_cols=283  Identities=24%  Similarity=0.375  Sum_probs=226.0

Q ss_pred             eeEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 018072           11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV   88 (361)
Q Consensus        11 m~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~   88 (361)
                      ||++++...+..  +++.+.+.|.++++|++|||.++++|+.|+..+.+..+....|.++|||++|+|+++|+  ..+++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~   78 (320)
T cd08243           1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTP   78 (320)
T ss_pred             CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCC
Confidence            688998876642  67778888888999999999999999999998877654455688999999999999995  57999


Q ss_pred             CCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCC
Q 018072           89 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA  168 (361)
Q Consensus        89 Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~  168 (361)
                      ||+|+.....              .          |                   ....|+|++|+.++.+.++++|+++
T Consensus        79 Gd~V~~~~~~--------------~----------~-------------------~~~~g~~~~~~~~~~~~~~~ip~~~  115 (320)
T cd08243          79 GQRVATAMGG--------------M----------G-------------------RTFDGSYAEYTLVPNEQVYAIDSDL  115 (320)
T ss_pred             CCEEEEecCC--------------C----------C-------------------CCCCcccceEEEcCHHHcEeCCCCC
Confidence            9999854210              0          0                   0012489999999999999999999


Q ss_pred             ChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcC
Q 018072          169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  247 (361)
Q Consensus       169 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~  247 (361)
                      ++++++.+++++.|||+++.+...+++|++|+|+|+ |.+|++++|+|+..|+ +|+++..++++.+.++++|++++++.
T Consensus       116 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~  194 (320)
T cd08243         116 SWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVID  194 (320)
T ss_pred             CHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEec
Confidence            999999999999999999877788999999999997 9999999999999999 79999999999999999999887754


Q ss_pred             CCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceee-cChhh---hccccEEEEeee
Q 018072          248 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFM-TKPIN---VLNERTLKGTFF  323 (361)
Q Consensus       248 ~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~-~~~~~---~~~~~~l~g~~~  323 (361)
                       ..+  +.+.+..+ +.++|+++|++|+ ..+..++++++++ |+++.+|......... .....   +.+++++.++..
T Consensus       195 -~~~--~~~~i~~~-~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (320)
T cd08243         195 -DGA--IAEQLRAA-PGGFDKVLELVGT-ATLKDSLRHLRPG-GIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSS  268 (320)
T ss_pred             -Ccc--HHHHHHHh-CCCceEEEECCCh-HHHHHHHHHhccC-CEEEEEccCCCCcccCCcchhhhhhhccceEEEecch
Confidence             222  66677767 4589999999998 6889999999998 9999999754222211 11111   236777777653


Q ss_pred             cCCCcCCcHHHHHHHHHcCCccc
Q 018072          324 GNYKPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~l~~  346 (361)
                      .... ...++.++++++++.++.
T Consensus       269 ~~~~-~~~~~~~~~~~~~~~~~~  290 (320)
T cd08243         269 GDVP-QTPLQELFDFVAAGHLDI  290 (320)
T ss_pred             hhhh-HHHHHHHHHHHHCCceec
Confidence            3221 235788889998888753

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=100.00  E-value=6.5e-31  Score=246.85  Aligned_cols=261  Identities=20%  Similarity=0.210  Sum_probs=208.4

Q ss_pred             eeEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCC-CCCCCCcccccceeEEEEEeCCCCCCCC
Q 018072           11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG-QTPLFPRIFGHEAAGVVESVGEGVSDLE   87 (361)
Q Consensus        11 m~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~-~~~~~p~~~G~e~~G~V~~~G~~v~~~~   87 (361)
                      |||+++.+++++  +.+++.|.|.|.++||+||+.++++|++|.....+.+ ....+|.++|||++|+|++.|  +..|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~   78 (326)
T cd08289           1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK   78 (326)
T ss_pred             CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence            799999988764  7889999999999999999999999999987654322 123458899999999999954  57799


Q ss_pred             CCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072           88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  167 (361)
Q Consensus        88 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~  167 (361)
                      +||+|+..+..                        +|.                   ...|+|+||+.++.+.++++|++
T Consensus        79 ~Gd~V~~~~~~------------------------~~~-------------------~~~g~~~~~~~v~~~~~~~~p~~  115 (326)
T cd08289          79 PGDEVIVTSYD------------------------LGV-------------------SHHGGYSEYARVPAEWVVPLPKG  115 (326)
T ss_pred             CCCEEEEcccc------------------------cCC-------------------CCCCcceeEEEEcHHHeEECCCC
Confidence            99999865310                        010                   11248999999999999999999


Q ss_pred             CChhhhhccccchhhhhhhhhhh--cC-CCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCE
Q 018072          168 APLDKVCILSCGVSTGLGATLNV--AK-PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD  243 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~~~--~~-~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~  243 (361)
                      +++++++.+++++.|||.++...  .. ...+++|+|+|+ |.+|++++|+|+.+|+ +|+++++++++.+.++++|++.
T Consensus       116 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~  194 (326)
T cd08289         116 LTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKE  194 (326)
T ss_pred             CCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCE
Confidence            99999999999999999886432  23 345789999998 9999999999999999 8999999999999999999988


Q ss_pred             EEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh-ccccEEEEee
Q 018072          244 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTF  322 (361)
Q Consensus       244 vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~l~g~~  322 (361)
                      +++..+.   ..+.+..+.++++|++||++|+ ..+..++++++++ |+++.+|.... ...+.....+ .+++++.++.
T Consensus       195 v~~~~~~---~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~~~  268 (326)
T cd08289         195 VIPREEL---QEESIKPLEKQRWAGAVDPVGG-KTLAYLLSTLQYG-GSVAVSGLTGG-GEVETTVFPFILRGVNLLGID  268 (326)
T ss_pred             EEcchhH---HHHHHHhhccCCcCEEEECCcH-HHHHHHHHHhhcC-CEEEEEeecCC-CCCCcchhhhhhccceEEEEE
Confidence            8876542   2344555544489999999998 7889999999998 99999997642 2223223334 4899999875


Q ss_pred             e
Q 018072          323 F  323 (361)
Q Consensus       323 ~  323 (361)
                      .
T Consensus       269 ~  269 (326)
T cd08289         269 S  269 (326)
T ss_pred             e
Confidence            3

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=2e-31  Score=249.56  Aligned_cols=267  Identities=28%  Similarity=0.422  Sum_probs=203.7

Q ss_pred             eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCC----CCcccccceeEE---EEEeC-CCCCCCCCCCEEee
Q 018072           23 LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL----FPRIFGHEAAGV---VESVG-EGVSDLEVGDHVLP   94 (361)
Q Consensus        23 ~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~----~p~~~G~e~~G~---V~~~G-~~v~~~~~Gd~V~~   94 (361)
                      ...++.++|.|++++++|++.++++|+.|+.+..|.+....    +|.+++.++.|+   +...| ..+..+..||.+..
T Consensus        20 ~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~~   99 (347)
T KOG1198|consen   20 LFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVVA   99 (347)
T ss_pred             EEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEee
Confidence            56688999999999999999999999999999998775543    675555555554   33444 23334555655542


Q ss_pred             cCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCChhhhh
Q 018072           95 VFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVC  174 (361)
Q Consensus        95 ~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~~~aa  174 (361)
                      .                                                 ...|+|+||+++|...++++|+++++++||
T Consensus       100 ~-------------------------------------------------~~~g~~aey~v~p~~~~~~~P~~l~~~~aa  130 (347)
T KOG1198|consen  100 F-------------------------------------------------LSSGGLAEYVVVPEKLLVKIPESLSFEEAA  130 (347)
T ss_pred             c-------------------------------------------------cCCCceeeEEEcchhhccCCCCccChhhhh
Confidence            2                                                 123589999999999999999999999999


Q ss_pred             ccccchhhhhhhhhhhc------CCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcC
Q 018072          175 ILSCGVSTGLGATLNVA------KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  247 (361)
Q Consensus       175 ~l~~~~~ta~~a~~~~~------~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~  247 (361)
                      +++.++.|||.++++..      +.++|++|||+|+ |++|++++|+|+..++ ..+++.+++++.++++++|+++++||
T Consensus       131 ~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy  209 (347)
T KOG1198|consen  131 ALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDY  209 (347)
T ss_pred             cCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecC
Confidence            99999999999999999      8999999999976 8999999999999996 55666699999999999999999999


Q ss_pred             CCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCC-ceeecC-hh------h----hccc
Q 018072          248 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD-AVFMTK-PI------N----VLNE  315 (361)
Q Consensus       248 ~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~-~~~~~~-~~------~----~~~~  315 (361)
                      ++.+  +.+.++..+.++||+||||+|+ .....+..++... |+...++..... .+.+.. ..      .    ..++
T Consensus       210 ~~~~--~~e~~kk~~~~~~DvVlD~vg~-~~~~~~~~~l~~~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (347)
T KOG1198|consen  210 KDEN--VVELIKKYTGKGVDVVLDCVGG-STLTKSLSCLLKG-GGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKG  285 (347)
T ss_pred             CCHH--HHHHHHhhcCCCccEEEECCCC-CccccchhhhccC-CceEEEEeccccccccccccchhhhhhhhheeeeeec
Confidence            9966  8889888884599999999999 4778888888887 765555443311 111111 00      0    0111


Q ss_pred             cEEEEeeecCCCcCCcHHHHHHHHHcCCcc
Q 018072          316 RTLKGTFFGNYKPRTDLPSVVDMYMNKVIR  345 (361)
Q Consensus       316 ~~l~g~~~~~~~~~~~~~~~~~~~~~~~l~  345 (361)
                      ..+....  -..+.+.++.+.++++.+++.
T Consensus       286 ~~~~~~~--~~~~~~~l~~l~~~ie~gkik  313 (347)
T KOG1198|consen  286 VNYRWLY--FVPSAEYLKALVELIEKGKIK  313 (347)
T ss_pred             cceeeee--ecCCHHHHHHHHHHHHcCccc
Confidence            1111111  122467788999999999884

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=100.00  E-value=1.9e-30  Score=243.43  Aligned_cols=279  Identities=18%  Similarity=0.208  Sum_probs=216.2

Q ss_pred             eEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCCCCCC
Q 018072           12 KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEV   88 (361)
Q Consensus        12 ~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~~~~~   88 (361)
                      ||+++...+.+  ++++++|.|.+.++||+|||.++++|++|+..+.|..+. ...|.++|||++|+|++  +++..|++
T Consensus         1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~   78 (323)
T TIGR02823         1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFRE   78 (323)
T ss_pred             CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCC
Confidence            67888877664  789999999999999999999999999999988776532 34588999999999998  56678999


Q ss_pred             CCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCC
Q 018072           89 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA  168 (361)
Q Consensus        89 Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~  168 (361)
                      ||+|++.+..              .          |.                   ...|+|++|+.+|.+.++++|+++
T Consensus        79 Gd~V~~~~~~--------------~----------~~-------------------~~~g~~~~~~~~~~~~~~~iP~~~  115 (323)
T TIGR02823        79 GDEVIVTGYG--------------L----------GV-------------------SHDGGYSQYARVPADWLVPLPEGL  115 (323)
T ss_pred             CCEEEEccCC--------------C----------CC-------------------CCCccceEEEEEchhheEECCCCC
Confidence            9999865310              0          00                   012489999999999999999999


Q ss_pred             Chhhhhccccchhhhhhhhhh--hcCCCCCC-EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEE
Q 018072          169 PLDKVCILSCGVSTGLGATLN--VAKPERGS-SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF  244 (361)
Q Consensus       169 ~~~~aa~l~~~~~ta~~a~~~--~~~~~~g~-~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~v  244 (361)
                      ++++++.+++.+.+||.++..  ...+.+|+ +|+|+|+ |.+|++++|+|+++|+ +++++..++++.+.++++|++.+
T Consensus       116 ~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~~  194 (323)
T TIGR02823       116 SLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASEV  194 (323)
T ss_pred             CHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcEE
Confidence            999999999899999887533  34488998 9999998 9999999999999999 78888788888899999999888


Q ss_pred             EcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh-ccccEEEEeee
Q 018072          245 VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFF  323 (361)
Q Consensus       245 v~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~  323 (361)
                      ++..+.+    ..++.+..+++|+++|++|+ ..+..++++++++ |+++.+|.... .....+...+ .+++++.+...
T Consensus       195 ~~~~~~~----~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~  267 (323)
T TIGR02823       195 IDREDLS----PPGKPLEKERWAGAVDTVGG-HTLANVLAQLKYG-GAVAACGLAGG-PDLPTTVLPFILRGVSLLGIDS  267 (323)
T ss_pred             EccccHH----HHHHHhcCCCceEEEECccH-HHHHHHHHHhCCC-CEEEEEcccCC-CCccccHHHHhhcceEEEEEec
Confidence            8764422    24445554479999999998 5788999999998 99999997642 2233332334 58999988764


Q ss_pred             cCCCcCC----cHHHHHHHHHcCCc
Q 018072          324 GNYKPRT----DLPSVVDMYMNKVI  344 (361)
Q Consensus       324 ~~~~~~~----~~~~~~~~~~~~~l  344 (361)
                      .... .+    .+..+.+++..+.+
T Consensus       268 ~~~~-~~~~~~~~~~~~~~~~~~~~  291 (323)
T TIGR02823       268 VYCP-MALREAAWQRLATDLKPRNL  291 (323)
T ss_pred             cccC-chhHHHHHHHHHHHhhcCCC
Confidence            3221 12    23445556656654

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=100.00  E-value=4.4e-31  Score=250.54  Aligned_cols=236  Identities=25%  Similarity=0.336  Sum_probs=198.3

Q ss_pred             eeEEEeecCCCC---eEEEEeecCCCC-CCeEEEEEeEEecCccchhccccCCC---------------CCCCCcccccc
Q 018072           11 CKAAVAWEAGKP---LIIQDVEVAPPQ-AMEVRIKIKYTSLCRTDLYFWESKGQ---------------TPLFPRIFGHE   71 (361)
Q Consensus        11 m~a~~~~~~~~~---~~~~~~~~p~~~-~~evlVkv~~~~i~~~D~~~~~g~~~---------------~~~~p~~~G~e   71 (361)
                      |||+++.+++++   +++++.+.|.|. ++||+|||+++++|++|+.+..+...               ...+|.++|||
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e   80 (350)
T cd08248           1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD   80 (350)
T ss_pred             CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence            789999888875   889999999994 99999999999999999998776421               23568899999


Q ss_pred             eeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccce
Q 018072           72 AAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFS  151 (361)
Q Consensus        72 ~~G~V~~~G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~a  151 (361)
                      ++|+|+++|+++.++++||+|+..+..                                              +..|+|+
T Consensus        81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~----------------------------------------------~~~g~~~  114 (350)
T cd08248          81 CSGVVVDIGSGVKSFEIGDEVWGAVPP----------------------------------------------WSQGTHA  114 (350)
T ss_pred             eEEEEEecCCCcccCCCCCEEEEecCC----------------------------------------------CCCccce
Confidence            999999999999999999999864311                                              0124899


Q ss_pred             eeEEEeccceEECCCCCChhhhhccccchhhhhhhhhhhcCCC----CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEE
Q 018072          152 EYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPE----RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV  226 (361)
Q Consensus       152 e~v~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~----~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~  226 (361)
                      +|+.++.+.++++|+++++++++.+++++.|||+++.+...+.    +|++|+|+|+ |++|++++++|+.+|+ +|+++
T Consensus       115 ~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~  193 (350)
T cd08248         115 EYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGA-HVTTT  193 (350)
T ss_pred             eEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEE
Confidence            9999999999999999999999999999999999976766665    4999999996 9999999999999999 78777


Q ss_pred             cCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072          227 DRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       227 ~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      .++ ++.+.++++|++.+++....+  +.+.+...  +++|++||++|++ .+..++++++++ |+++.+|...
T Consensus       194 ~~~-~~~~~~~~~g~~~~~~~~~~~--~~~~l~~~--~~vd~vi~~~g~~-~~~~~~~~l~~~-G~~v~~g~~~  260 (350)
T cd08248         194 CST-DAIPLVKSLGADDVIDYNNED--FEEELTER--GKFDVILDTVGGD-TEKWALKLLKKG-GTYVTLVSPL  260 (350)
T ss_pred             eCc-chHHHHHHhCCceEEECCChh--HHHHHHhc--CCCCEEEECCChH-HHHHHHHHhccC-CEEEEecCCc
Confidence            654 678888999998888765533  44444321  3799999999984 889999999998 9999998643

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=99.98  E-value=5.6e-30  Score=238.73  Aligned_cols=281  Identities=27%  Similarity=0.350  Sum_probs=229.0

Q ss_pred             eeEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 018072           11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE   87 (361)
Q Consensus        11 m~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~~~~   87 (361)
                      |||+++.+.+.+  +++++.+.|.+.+++++|||.++++|++|+....+..+. ..+|.++|||++|+|+++|+++..++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~   80 (323)
T cd05276           1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK   80 (323)
T ss_pred             CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence            799999886543  778888888889999999999999999999887665432 34678999999999999999999999


Q ss_pred             CCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072           88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  167 (361)
Q Consensus        88 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~  167 (361)
                      +||+|+...                               .                  .|+|++|+.++.+.++++|++
T Consensus        81 ~Gd~V~~~~-------------------------------~------------------~g~~~~~~~~~~~~~~~~p~~  111 (323)
T cd05276          81 VGDRVCALL-------------------------------A------------------GGGYAEYVVVPAGQLLPVPEG  111 (323)
T ss_pred             CCCEEEEec-------------------------------C------------------CCceeEEEEcCHHHhccCCCC
Confidence            999998431                               0                  138999999999999999999


Q ss_pred             CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEc
Q 018072          168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  246 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~  246 (361)
                      +++.+++.++.++.++|+++.+...+.++++|+|+|+ |.+|++++++++..|+ .|+.+++++++++.++++|++.+++
T Consensus       112 ~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~  190 (323)
T cd05276         112 LSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAIN  190 (323)
T ss_pred             CCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEe
Confidence            9999999999999999999877788999999999997 9999999999999999 7999999999999999999988877


Q ss_pred             CCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh-ccccEEEEeeec
Q 018072          247 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFG  324 (361)
Q Consensus       247 ~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~  324 (361)
                      ....+  +.+.+..+..+ ++|+++|++|+ ..+..++++++++ |+++.+|...... ..++...+ .+++++.++...
T Consensus       191 ~~~~~--~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~~~~~-g~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  265 (323)
T cd05276         191 YRTED--FAEEVKEATGGRGVDVILDMVGG-DYLARNLRALAPD-GRLVLIGLLGGAK-AELDLAPLLRKRLTLTGSTLR  265 (323)
T ss_pred             CCchh--HHHHHHHHhCCCCeEEEEECCch-HHHHHHHHhhccC-CEEEEEecCCCCC-CCCchHHHHHhCCeEEEeecc
Confidence            66544  66667766655 89999999998 5578899999998 9999998754222 23333444 389999988765


Q ss_pred             CCCc-------CCcHHHHHHHHHcCCccc
Q 018072          325 NYKP-------RTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       325 ~~~~-------~~~~~~~~~~~~~~~l~~  346 (361)
                      ....       ...++++++++.++++..
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (323)
T cd05276         266 SRSLEEKAALAAAFREHVWPLFASGRIRP  294 (323)
T ss_pred             chhhhccHHHHHHHHHHHHHHHHCCCccC
Confidence            4311       112456777888887753

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=99.98  E-value=4.9e-30  Score=241.19  Aligned_cols=278  Identities=20%  Similarity=0.256  Sum_probs=220.1

Q ss_pred             eeEEEeecCCC------CeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC---CCCCcccccceeEEEEEeCC
Q 018072           11 CKAAVAWEAGK------PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT---PLFPRIFGHEAAGVVESVGE   81 (361)
Q Consensus        11 m~a~~~~~~~~------~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~---~~~p~~~G~e~~G~V~~~G~   81 (361)
                      .|||++.+.++      .++++++|.|.+.+++|+|||.++++|+.|.....+....   ...+.++|+|++|+|+++|+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~   81 (329)
T cd05288           2 NRQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRS   81 (329)
T ss_pred             CcEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCC
Confidence            46777765442      2889999999999999999999999999876655443211   12355789999999999996


Q ss_pred             CCCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEec-cc
Q 018072           82 GVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHS-GC  160 (361)
Q Consensus        82 ~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~-~~  160 (361)
                      .  .+++||+|+..                                                    ++|++|+.++. +.
T Consensus        82 ~--~~~~Gd~V~~~----------------------------------------------------~~~~~~~~v~~~~~  107 (329)
T cd05288          82 P--DFKVGDLVSGF----------------------------------------------------LGWQEYAVVDGASG  107 (329)
T ss_pred             C--CCCCCCEEecc----------------------------------------------------cceEEEEEecchhh
Confidence            4  79999999832                                                    26999999999 99


Q ss_pred             eEECCCCCC--hhhhhc-cccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 018072          161 VAKINPLAP--LDKVCI-LSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA  236 (361)
Q Consensus       161 ~~~iP~~~~--~~~aa~-l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~  236 (361)
                      ++++|++++  ..+++. +++++.|||+++.+...+.+|++|+|+|+ |++|++++|+|+..|+ +|+++++++++.+.+
T Consensus       108 ~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~  186 (329)
T cd05288         108 LRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWL  186 (329)
T ss_pred             cEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHH
Confidence            999999985  445545 88899999999877788999999999986 9999999999999999 899999999999999


Q ss_pred             HH-cCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceee----c-Chh
Q 018072          237 KK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFM----T-KPI  310 (361)
Q Consensus       237 ~~-~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~----~-~~~  310 (361)
                      ++ +|++.++++.+.+  +.+.+..+.++++|++||++|+ ..+..++++++++ |+++.+|.........    + ...
T Consensus       187 ~~~~g~~~~~~~~~~~--~~~~v~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~  262 (329)
T cd05288         187 VEELGFDAAINYKTPD--LAEALKEAAPDGIDVYFDNVGG-EILDAALTLLNKG-GRIALCGAISQYNATEPPGPKNLGN  262 (329)
T ss_pred             HhhcCCceEEecCChh--HHHHHHHhccCCceEEEEcchH-HHHHHHHHhcCCC-ceEEEEeeccCcccccccccccHHH
Confidence            88 9999888876644  6677777765689999999998 6889999999998 9999998655322211    1 222


Q ss_pred             hhccccEEEEeeecCCCc--CCcHHHHHHHHHcCCcccC
Q 018072          311 NVLNERTLKGTFFGNYKP--RTDLPSVVDMYMNKVIRFS  347 (361)
Q Consensus       311 ~~~~~~~l~g~~~~~~~~--~~~~~~~~~~~~~~~l~~~  347 (361)
                      .+.++.++.++.......  .+.+.++++++.++.++..
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~  301 (329)
T cd05288         263 IITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYR  301 (329)
T ss_pred             HhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCcccc
Confidence            344889998876544321  2356788899999988643

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=99.97  E-value=1.3e-29  Score=237.88  Aligned_cols=282  Identities=16%  Similarity=0.171  Sum_probs=218.8

Q ss_pred             eeEEEeecCCC--CeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCC-CCCCCcccccceeEEEEEeCCCCCCCC
Q 018072           11 CKAAVAWEAGK--PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLE   87 (361)
Q Consensus        11 m~a~~~~~~~~--~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~v~~~~   87 (361)
                      |||+++.++|.  .+++++.|.|.|+++||+|||.++++|++|...+.+... ...+|.++|||++|+|++  +++..++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~   78 (324)
T cd08288           1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK   78 (324)
T ss_pred             CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence            78999998874  388999999999999999999999999999988776542 134578899999999998  7778899


Q ss_pred             CCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072           88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  167 (361)
Q Consensus        88 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~  167 (361)
                      +||+|+.....              .|                             .+..|+|++|+.++.+.++++|++
T Consensus        79 ~Gd~V~~~~~~--------------~~-----------------------------~~~~g~~~~~~~v~~~~~~~lp~~  115 (324)
T cd08288          79 PGDRVVLTGWG--------------VG-----------------------------ERHWGGYAQRARVKADWLVPLPEG  115 (324)
T ss_pred             CCCEEEECCcc--------------CC-----------------------------CCCCCcceeEEEEchHHeeeCCCC
Confidence            99999864210              00                             001248999999999999999999


Q ss_pred             CChhhhhccccchhhhhhhhh--hhcCCC-CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCE
Q 018072          168 APLDKVCILSCGVSTGLGATL--NVAKPE-RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD  243 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~--~~~~~~-~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~  243 (361)
                      +++++++.+++++.+++.++.  +..... +|++|+|+|+ |++|++++|+|+.+|+ +|++++.++++.+.++++|+++
T Consensus       116 ~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~  194 (324)
T cd08288         116 LSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASE  194 (324)
T ss_pred             CCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCE
Confidence            999999999989999987643  223444 6789999998 9999999999999999 7899889999999999999999


Q ss_pred             EEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh-ccccEEEEee
Q 018072          244 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTF  322 (361)
Q Consensus       244 vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~l~g~~  322 (361)
                      ++++.+    ....++.+..+++|.++|++++ ..+..++..++.+ |+++.+|.... .....++..+ .+++++.+..
T Consensus       195 ~~~~~~----~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~~-g~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~  267 (324)
T cd08288         195 IIDRAE----LSEPGRPLQKERWAGAVDTVGG-HTLANVLAQTRYG-GAVAACGLAGG-ADLPTTVMPFILRGVTLLGID  267 (324)
T ss_pred             EEEcch----hhHhhhhhccCcccEEEECCcH-HHHHHHHHHhcCC-CEEEEEEecCC-CCCCcchhhhhccccEEEEEE
Confidence            888754    2234555555578999999997 5677888899987 99999997532 2222333334 5899999876


Q ss_pred             ecCCCc---CCcHHHHHHHHHcCCcc
Q 018072          323 FGNYKP---RTDLPSVVDMYMNKVIR  345 (361)
Q Consensus       323 ~~~~~~---~~~~~~~~~~~~~~~l~  345 (361)
                      ......   .+.++.+.+++.++.++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (324)
T cd08288         268 SVMAPIERRRAAWARLARDLDPALLE  293 (324)
T ss_pred             eecccchhhHHHHHHHHHHHhcCCcc
Confidence            433211   22345566677777664

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=99.97  E-value=1.6e-29  Score=236.08  Aligned_cols=283  Identities=28%  Similarity=0.358  Sum_probs=227.3

Q ss_pred             eeEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCC-CCCCCcccccceeEEEEEeCCCCCCCC
Q 018072           11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLE   87 (361)
Q Consensus        11 m~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~v~~~~   87 (361)
                      ||++++..++.+  +.+.++|.|.+.+++++||+.++++|++|+....+... ....|.++|||++|+|+++|+++..|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~   80 (325)
T cd08253           1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK   80 (325)
T ss_pred             CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence            688888876543  88889999999999999999999999999988776543 245688999999999999999999999


Q ss_pred             CCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072           88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  167 (361)
Q Consensus        88 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~  167 (361)
                      +||+|+..+..                          ..                  ...|++++|+.++.+.++++|++
T Consensus        81 ~Gd~v~~~~~~--------------------------~~------------------~~~g~~~~~~~~~~~~~~~ip~~  116 (325)
T cd08253          81 VGDRVWLTNLG--------------------------WG------------------RRQGTAAEYVVVPADQLVPLPDG  116 (325)
T ss_pred             CCCEEEEeccc--------------------------cC------------------CCCcceeeEEEecHHHcEeCCCC
Confidence            99999865310                          00                  01248999999999999999999


Q ss_pred             CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEc
Q 018072          168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  246 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~  246 (361)
                      ++.++++.+++++.+||+++.+...+.+|++|+|+|+ |.+|++++++++..|. +|+++++++++.+.+.++|++.+++
T Consensus       117 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~  195 (325)
T cd08253         117 VSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFN  195 (325)
T ss_pred             CCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEe
Confidence            9999999999999999999877789999999999997 9999999999999998 8999999999999999999988887


Q ss_pred             CCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhh-hccccEEEEeeec
Q 018072          247 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFG  324 (361)
Q Consensus       247 ~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~l~g~~~~  324 (361)
                      ....+  +.+.+..+..+ ++|++++++++ ......++++++. |+++.+|.....  ..++... +.++.++.+...+
T Consensus       196 ~~~~~--~~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  269 (325)
T cd08253         196 YRAED--LADRILAATAGQGVDVIIEVLAN-VNLAKDLDVLAPG-GRIVVYGSGGLR--GTIPINPLMAKEASIRGVLLY  269 (325)
T ss_pred             CCCcC--HHHHHHHHcCCCceEEEEECCch-HHHHHHHHhhCCC-CEEEEEeecCCc--CCCChhHHHhcCceEEeeehh
Confidence            66544  66677777665 89999999998 5678889999998 999999875422  2233333 3477788776543


Q ss_pred             CCCcCC----cHHHHHHHHHcCCcc
Q 018072          325 NYKPRT----DLPSVVDMYMNKVIR  345 (361)
Q Consensus       325 ~~~~~~----~~~~~~~~~~~~~l~  345 (361)
                      .. .+.    .++.+.+++.++.++
T Consensus       270 ~~-~~~~~~~~~~~~~~~~~~~~i~  293 (325)
T cd08253         270 TA-TPEERAAAAEAIAAGLADGALR  293 (325)
T ss_pred             hc-CHHHHHHHHHHHHHHHHCCCcc
Confidence            32 122    234555667777654

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=99.97  E-value=2.4e-29  Score=234.18  Aligned_cols=279  Identities=26%  Similarity=0.325  Sum_probs=225.9

Q ss_pred             eEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018072           12 KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (361)
Q Consensus        12 ~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~G   89 (361)
                      ||+.+..++.+  +.+.+.+.|.+.+++++|||.++++|++|+....+..+. .+|.++|||++|+|+.+|+++..+++|
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~~~G   79 (320)
T cd05286           1 KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL-PLPFVLGVEGAGVVEAVGPGVTGFKVG   79 (320)
T ss_pred             CeEEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC-CCCccCCcceeEEEEEECCCCCCCCCC
Confidence            56776666553  667777777789999999999999999999987765432 457789999999999999999999999


Q ss_pred             CEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCC
Q 018072           90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP  169 (361)
Q Consensus        90 d~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~  169 (361)
                      |+|+...                                                 ..|+|++|+.++.+.++++|++++
T Consensus        80 ~~V~~~~-------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~  110 (320)
T cd05286          80 DRVAYAG-------------------------------------------------PPGAYAEYRVVPASRLVKLPDGIS  110 (320)
T ss_pred             CEEEEec-------------------------------------------------CCCceeEEEEecHHHceeCCCCCC
Confidence            9998431                                                 013799999999999999999999


Q ss_pred             hhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCC
Q 018072          170 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  248 (361)
Q Consensus       170 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~  248 (361)
                      ..+++.++....++|+++.+..++.+|++|+|+|+ |++|++++++|+.+|+ .|++++.++++.+.++++|++.+++..
T Consensus       111 ~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~  189 (320)
T cd05286         111 DETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYR  189 (320)
T ss_pred             HHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeCC
Confidence            99999998899999999877888999999999996 9999999999999999 899999999999999999998888765


Q ss_pred             CCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh-ccccEEEEeeecCC
Q 018072          249 EHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNY  326 (361)
Q Consensus       249 ~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~~~  326 (361)
                      ..+  +.+.+..++.+ ++|++++++++ ..+..++++++++ |+++.+|..... ...+++..+ .+++++.+......
T Consensus       190 ~~~--~~~~~~~~~~~~~~d~vl~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  264 (320)
T cd05286         190 DED--FVERVREITGGRGVDVVYDGVGK-DTFEGSLDSLRPR-GTLVSFGNASGP-VPPFDLLRLSKGSLFLTRPSLFHY  264 (320)
T ss_pred             chh--HHHHHHHHcCCCCeeEEEECCCc-HhHHHHHHhhccC-cEEEEEecCCCC-CCccCHHHHHhcCcEEEEEehhhh
Confidence            544  67777777766 89999999998 6888999999998 999999875532 222333334 47888876543332


Q ss_pred             C-cC----CcHHHHHHHHHcCCccc
Q 018072          327 K-PR----TDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       327 ~-~~----~~~~~~~~~~~~~~l~~  346 (361)
                      . .+    +.+.+++++++++.+..
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~l~~  289 (320)
T cd05286         265 IATREELLARAAELFDAVASGKLKV  289 (320)
T ss_pred             cCCHHHHHHHHHHHHHHHHCCCCcC
Confidence            1 11    22356778888887753

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=1.2e-29  Score=237.48  Aligned_cols=284  Identities=24%  Similarity=0.291  Sum_probs=222.1

Q ss_pred             eeEEEeecCC--CCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 018072           11 CKAAVAWEAG--KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV   88 (361)
Q Consensus        11 m~a~~~~~~~--~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~   88 (361)
                      |||+++.+++  +.++++++|.|++.+++++|||.++++|++|+....+.......|.++|||++|+|+.+|+++..+++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~   80 (325)
T cd08271           1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKV   80 (325)
T ss_pred             CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCC
Confidence            7999999998  34999999999999999999999999999999887665433334778999999999999999999999


Q ss_pred             CCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCC
Q 018072           89 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA  168 (361)
Q Consensus        89 Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~  168 (361)
                      ||+|+..+..                                              ...|+|++|+.++.+.++++|+++
T Consensus        81 Gd~V~~~~~~----------------------------------------------~~~~~~~s~~~~~~~~~~~ip~~~  114 (325)
T cd08271          81 GDRVAYHASL----------------------------------------------ARGGSFAEYTVVDARAVLPLPDSL  114 (325)
T ss_pred             CCEEEeccCC----------------------------------------------CCCccceeEEEeCHHHeEECCCCC
Confidence            9999864211                                              012489999999999999999999


Q ss_pred             ChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcC
Q 018072          169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  247 (361)
Q Consensus       169 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~  247 (361)
                      +..+++.+.+++.++|+++.+...+++|++|+|+|+ |.+|++++++|+..|+ +|+.+. ++++.+.+.++|++.+++.
T Consensus       115 ~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~~~~~  192 (325)
T cd08271         115 SFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVITTC-SKRNFEYVKSLGADHVIDY  192 (325)
T ss_pred             CHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEE-cHHHHHHHHHcCCcEEecC
Confidence            999999999999999999878888999999999998 8999999999999999 777775 6778888888999888876


Q ss_pred             CCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCce-eecChhhhccccEEEEeeecC
Q 018072          248 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV-FMTKPINVLNERTLKGTFFGN  325 (361)
Q Consensus       248 ~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~-~~~~~~~~~~~~~l~g~~~~~  325 (361)
                      ...+  +.+.++.+..+ ++|++++++++. ....+++++++. |+++.+|....... ..+.....++++.+.+.....
T Consensus       193 ~~~~--~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~-G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (325)
T cd08271         193 NDED--VCERIKEITGGRGVDAVLDTVGGE-TAAALAPTLAFN-GHLVCIQGRPDASPDPPFTRALSVHEVALGAAHDHG  268 (325)
T ss_pred             CCcc--HHHHHHHHcCCCCCcEEEECCCcH-hHHHHHHhhccC-CEEEEEcCCCCCcchhHHhhcceEEEEEeccccccc
Confidence            5544  66677777665 899999999984 556789999998 99999875442211 111111112444444332211


Q ss_pred             C-----CcCCcHHHHHHHHHcCCccc
Q 018072          326 Y-----KPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       326 ~-----~~~~~~~~~~~~~~~~~l~~  346 (361)
                      .     ...+.+.++++++.++.++.
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~i~~  294 (325)
T cd08271         269 DPAAWQDLRYAGEELLELLAAGKLEP  294 (325)
T ss_pred             chhhHHHHHHHHHHHHHHHHCCCeee
Confidence            1     11223467788888887753

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=1.4e-29  Score=238.11  Aligned_cols=276  Identities=23%  Similarity=0.308  Sum_probs=216.5

Q ss_pred             eEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCCCCCC
Q 018072           12 KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEV   88 (361)
Q Consensus        12 ~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~~~~~   88 (361)
                      ||+++...+.+  +++++.+.|.|.++||+|||.++++|++|+.++.+..+. ..+|.++|||++|+|+++|+++..|++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~   81 (331)
T cd08273           2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEV   81 (331)
T ss_pred             eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCCC
Confidence            78888887754  888999999999999999999999999999988775532 356889999999999999999999999


Q ss_pred             CCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCC
Q 018072           89 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA  168 (361)
Q Consensus        89 Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~  168 (361)
                      ||+|+....                                                 .|+|++|+.++.+.++++|+++
T Consensus        82 Gd~V~~~~~-------------------------------------------------~g~~~~~~~~~~~~~~~~p~~~  112 (331)
T cd08273          82 GDRVAALTR-------------------------------------------------VGGNAEYINLDAKYLVPVPEGV  112 (331)
T ss_pred             CCEEEEeCC-------------------------------------------------CcceeeEEEechHHeEECCCCC
Confidence            999985421                                                 1379999999999999999999


Q ss_pred             ChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcC
Q 018072          169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  247 (361)
Q Consensus       169 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~  247 (361)
                      +.++++.++.++.+||+++.+...+++|++|+|+|+ |++|++++++|+..|+ +|+.+.. +++.++++++|+.. ++.
T Consensus       113 ~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~~  189 (331)
T cd08273         113 DAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-IDY  189 (331)
T ss_pred             CHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-EcC
Confidence            999999999999999999877788999999999997 9999999999999999 7888877 88899999999754 343


Q ss_pred             CCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecC--hh-----------hhc-
Q 018072          248 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK--PI-----------NVL-  313 (361)
Q Consensus       248 ~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~--~~-----------~~~-  313 (361)
                      ...+  +.+.  ...++++|+++|++++. .+..++++++++ |+++.+|.........+.  +.           ... 
T Consensus       190 ~~~~--~~~~--~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (331)
T cd08273         190 RTKD--WLPA--MLTPGGVDVVFDGVGGE-SYEESYAALAPG-GTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPT  263 (331)
T ss_pred             CCcc--hhhh--hccCCCceEEEECCchH-HHHHHHHHhcCC-CEEEEEccCCCCCCccccccchhhhhhhhhhhcceec
Confidence            3332  3333  23334899999999985 488999999998 999999876533222111  10           111 


Q ss_pred             -cccEEEEeeecCCC----cCCcHHHHHHHHHcCCcc
Q 018072          314 -NERTLKGTFFGNYK----PRTDLPSVVDMYMNKVIR  345 (361)
Q Consensus       314 -~~~~l~g~~~~~~~----~~~~~~~~~~~~~~~~l~  345 (361)
                       ++.++.+.......    ..+.+.+++++++++.++
T Consensus       264 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~  300 (331)
T cd08273         264 GRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIR  300 (331)
T ss_pred             cceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCcc
Confidence             33344333321110    134667888999998875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=7.7e-29  Score=231.90  Aligned_cols=280  Identities=25%  Similarity=0.332  Sum_probs=225.3

Q ss_pred             eeEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCC-CCCCCcccccceeEEEEEeCCCCCCCC
Q 018072           11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGVSDLE   87 (361)
Q Consensus        11 m~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~v~~~~   87 (361)
                      |||+++.+++.+  +++++.+.|.+.+++|+|||.++++|++|+.+..+... ....|.++|||++|+|+++|+++..|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (326)
T cd08272           1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR   80 (326)
T ss_pred             CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence            799999988765  77888888888999999999999999999988766443 233578899999999999999999999


Q ss_pred             CCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072           88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  167 (361)
Q Consensus        88 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~  167 (361)
                      +||+|+....                          |..                  ...|+|++|+.++.+.++++|++
T Consensus        81 ~Gd~V~~~~~--------------------------~~~------------------~~~g~~~~~~~v~~~~~~~~p~~  116 (326)
T cd08272          81 VGDEVYGCAG--------------------------GLG------------------GLQGSLAEYAVVDARLLALKPAN  116 (326)
T ss_pred             CCCEEEEccC--------------------------CcC------------------CCCCceeEEEEecHHHcccCCCC
Confidence            9999985421                          000                  01248999999999999999999


Q ss_pred             CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEc
Q 018072          168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  246 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~  246 (361)
                      +++.+++.++.++.+||+++.+..++++|++++|+|+ |++|++++++|+..|. +|+.+.++ ++.++++++|++.+++
T Consensus       117 ~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~  194 (326)
T cd08272         117 LSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPIIY  194 (326)
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEEEe
Confidence            9999999999899999998878889999999999986 9999999999999999 78888888 8899999999988776


Q ss_pred             CCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecC
Q 018072          247 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN  325 (361)
Q Consensus       247 ~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~  325 (361)
                      ...  . +.+.+..++.+ ++|+++|++++ .....+++++++. |+++.+|...   ...+... ..+++++.+.....
T Consensus       195 ~~~--~-~~~~~~~~~~~~~~d~v~~~~~~-~~~~~~~~~l~~~-g~~v~~~~~~---~~~~~~~-~~~~~~~~~~~~~~  265 (326)
T cd08272         195 YRE--T-VVEYVAEHTGGRGFDVVFDTVGG-ETLDASFEAVALY-GRVVSILGGA---THDLAPL-SFRNATYSGVFTLL  265 (326)
T ss_pred             cch--h-HHHHHHHhcCCCCCcEEEECCCh-HHHHHHHHHhccC-CEEEEEecCC---ccchhhH-hhhcceEEEEEccc
Confidence            543  2 56677777766 89999999998 5788899999997 9999998653   2222222 24778877766432


Q ss_pred             --C--C----cCCcHHHHHHHHHcCCcc
Q 018072          326 --Y--K----PRTDLPSVVDMYMNKVIR  345 (361)
Q Consensus       326 --~--~----~~~~~~~~~~~~~~~~l~  345 (361)
                        .  .    ..+.++.+++++.++.+.
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~  293 (326)
T cd08272         266 PLLTGEGRAHHGEILREAARLVERGQLR  293 (326)
T ss_pred             ccccccchhhHHHHHHHHHHHHHCCCcc
Confidence              1  0    123567788888888765

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=99.97  E-value=1.1e-28  Score=234.50  Aligned_cols=240  Identities=23%  Similarity=0.333  Sum_probs=193.4

Q ss_pred             eEEEeecCCCCeEEEEeecCCC---CCCeEEEEEeEEecCccchhccccCCCCCC-CCcccccceeEEEEEeCCCCC-CC
Q 018072           12 KAAVAWEAGKPLIIQDVEVAPP---QAMEVRIKIKYTSLCRTDLYFWESKGQTPL-FPRIFGHEAAGVVESVGEGVS-DL   86 (361)
Q Consensus        12 ~a~~~~~~~~~~~~~~~~~p~~---~~~evlVkv~~~~i~~~D~~~~~g~~~~~~-~p~~~G~e~~G~V~~~G~~v~-~~   86 (361)
                      |++++.+++.++++++++.|.|   ++++|+|||.++++|++|+..+.+...... .|.++|||++|+|+++|++++ .|
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~   81 (352)
T cd08247           2 KALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASEW   81 (352)
T ss_pred             ceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccCC
Confidence            6899999988888887777776   889999999999999999987654222122 377899999999999999998 89


Q ss_pred             CCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEecc----ceE
Q 018072           87 EVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG----CVA  162 (361)
Q Consensus        87 ~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~----~~~  162 (361)
                      ++||+|+......|                       +                     ..|+|++|++++..    .++
T Consensus        82 ~~Gd~V~~~~~~~~-----------------------~---------------------~~g~~~~~~~v~~~~~~~~~~  117 (352)
T cd08247          82 KVGDEVCGIYPHPY-----------------------G---------------------GQGTLSQYLLVDPKKDKKSIT  117 (352)
T ss_pred             CCCCEEEEeecCCC-----------------------C---------------------CCceeeEEEEEccccccceeE
Confidence            99999985422110                       0                     12489999999987    799


Q ss_pred             ECCCCCChhhhhccccchhhhhhhhhhhc-CCCCCCEEEEEcC-CHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHHc
Q 018072          163 KINPLAPLDKVCILSCGVSTGLGATLNVA-KPERGSSVAVFGL-GAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKF  239 (361)
Q Consensus       163 ~iP~~~~~~~aa~l~~~~~ta~~a~~~~~-~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~~  239 (361)
                      ++|+++++.+++.++.++.|||+++.+.. .+++|++|+|+|+ |.+|++++|+|+++|. +.|+.+.+ +++.+.++++
T Consensus       118 ~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~~-~~~~~~~~~~  196 (352)
T cd08247         118 RKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTCS-SRSAELNKKL  196 (352)
T ss_pred             ECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEeC-hhHHHHHHHh
Confidence            99999999999999999999999976666 7999999999988 7999999999999854 36777754 5556688889


Q ss_pred             CCCEEEcCCCCCc--cHHHHHHHHc-CCCccEEEEccCChHHHHHHHHHhc---CCCcEEEEEc
Q 018072          240 GVTDFVNTSEHDR--PIQEVIAEMT-NGGVDRSVECTGNIDNMISAFECVH---DGWGVAVLVG  297 (361)
Q Consensus       240 G~~~vv~~~~~~~--~~~~~i~~~~-~~g~Dvvid~~g~~~~~~~~~~~l~---~~~G~iv~~g  297 (361)
                      |++.+++..+.+.  .+.+.++..+ ++++|++||++|+......++++++   ++ |+++.++
T Consensus       197 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~-G~~v~~~  259 (352)
T cd08247         197 GADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKN-GHYVTIV  259 (352)
T ss_pred             CCCEEEecCCCcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCC-CEEEEEe
Confidence            9999888655331  1344444444 3489999999998678889999999   98 9999774

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=99.97  E-value=1.1e-28  Score=230.63  Aligned_cols=280  Identities=25%  Similarity=0.310  Sum_probs=226.8

Q ss_pred             eeEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 018072           11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE   87 (361)
Q Consensus        11 m~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~~~~   87 (361)
                      |||+.+..++.+  +++++.+.|.+.+++++|||.++++|++|+....+..+. ..+|.++|||++|+|+.+|+++..++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~   80 (325)
T TIGR02824         1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK   80 (325)
T ss_pred             CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCC
Confidence            688888876654  667777777788999999999999999999887664432 34578999999999999999999999


Q ss_pred             CCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072           88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  167 (361)
Q Consensus        88 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~  167 (361)
                      +||+|+....                                                 .|+|++|+.++.+.++++|++
T Consensus        81 ~Gd~V~~~~~-------------------------------------------------~~~~~~~~~~~~~~~~~ip~~  111 (325)
T TIGR02824        81 VGDRVCALVA-------------------------------------------------GGGYAEYVAVPAGQVLPVPEG  111 (325)
T ss_pred             CCCEEEEccC-------------------------------------------------CCcceeEEEecHHHcEeCCCC
Confidence            9999984310                                                 137999999999999999999


Q ss_pred             CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEc
Q 018072          168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  246 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~  246 (361)
                      +++.+++.++.++.++|+++.+...+++|++++|+|+ |++|++++++++..|+ +|+++.+++++.+.++++|++.+++
T Consensus       112 ~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~  190 (325)
T TIGR02824       112 LSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAIN  190 (325)
T ss_pred             CCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEe
Confidence            9999999999999999998878889999999999997 9999999999999999 8899989999999998899887776


Q ss_pred             CCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh-ccccEEEEeeec
Q 018072          247 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFG  324 (361)
Q Consensus       247 ~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~  324 (361)
                      ....+  +.+.+.....+ ++|++++++|+ ..+..++++++++ |+++.+|....... .+++..+ .+++++.+....
T Consensus       191 ~~~~~--~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~  265 (325)
T TIGR02824       191 YREED--FVEVVKAETGGKGVDVILDIVGG-SYLNRNIKALALD-GRIVQIGFQGGRKA-ELDLGPLLAKRLTITGSTLR  265 (325)
T ss_pred             cCchh--HHHHHHHHcCCCCeEEEEECCch-HHHHHHHHhhccC-cEEEEEecCCCCcC-CCChHHHHhcCCEEEEEehh
Confidence            65443  66677776665 89999999998 5788899999998 99999987542222 4444444 489999988754


Q ss_pred             CCCc-------CCcHHHHHHHHHcCCcc
Q 018072          325 NYKP-------RTDLPSVVDMYMNKVIR  345 (361)
Q Consensus       325 ~~~~-------~~~~~~~~~~~~~~~l~  345 (361)
                      ....       ...+.+++++++++.++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~  293 (325)
T TIGR02824       266 ARPVAEKAAIAAELREHVWPLLASGRVR  293 (325)
T ss_pred             hcchhhhHHHHHHHHHHHHHHHHCCccc
Confidence            4211       11235567788887764

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=2.1e-28  Score=228.91  Aligned_cols=285  Identities=27%  Similarity=0.363  Sum_probs=225.5

Q ss_pred             eeEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 018072           11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE   87 (361)
Q Consensus        11 m~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~~~~   87 (361)
                      |||+.+...+.+  +.+.+.+.|.+.+++++|+|.++++|+.|..+..+.... ..+|.++|||++|+|+.+|+++..++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~   80 (328)
T cd08268           1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFA   80 (328)
T ss_pred             CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCC
Confidence            688998876643  777788888889999999999999999999887665432 34577899999999999999999999


Q ss_pred             CCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072           88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  167 (361)
Q Consensus        88 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~  167 (361)
                      +||+|+..+...                                            ....|+|++|+.++.+.++++|++
T Consensus        81 ~Gd~V~~~~~~~--------------------------------------------~~~~g~~~~~~~~~~~~~~~~p~~  116 (328)
T cd08268          81 VGDRVSVIPAAD--------------------------------------------LGQYGTYAEYALVPAAAVVKLPDG  116 (328)
T ss_pred             CCCEEEeccccc--------------------------------------------cCCCccceEEEEechHhcEeCCCC
Confidence            999998653210                                            001248999999999999999999


Q ss_pred             CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEc
Q 018072          168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  246 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~  246 (361)
                      +++.+++.+++++.++|+++.....+.++++++|+|+ |.+|++++++++..|. +++.++.++++.+.++++|++.+++
T Consensus       117 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~  195 (328)
T cd08268         117 LSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIV  195 (328)
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEe
Confidence            9999999999999999999877888999999999997 9999999999999999 8888889999999998899988887


Q ss_pred             CCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChh-hhccccEEEEeeec
Q 018072          247 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVLNERTLKGTFFG  324 (361)
Q Consensus       247 ~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~-~~~~~~~l~g~~~~  324 (361)
                      ....+  +.+.+..+..+ ++|++++++++ .....++++++++ |+++.+|.... ....+... .+.+++++.+....
T Consensus       196 ~~~~~--~~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~  270 (328)
T cd08268         196 TDEED--LVAEVLRITGGKGVDVVFDPVGG-PQFAKLADALAPG-GTLVVYGALSG-EPTPFPLKAALKKSLTFRGYSLD  270 (328)
T ss_pred             cCCcc--HHHHHHHHhCCCCceEEEECCch-HhHHHHHHhhccC-CEEEEEEeCCC-CCCCCchHHHhhcCCEEEEEecc
Confidence            66544  66667776665 89999999998 6788899999998 99999986553 22223333 24488888877644


Q ss_pred             CC-CcCCcH----HHHHHHHHcCCcc
Q 018072          325 NY-KPRTDL----PSVVDMYMNKVIR  345 (361)
Q Consensus       325 ~~-~~~~~~----~~~~~~~~~~~l~  345 (361)
                      .. ..++++    ..+.+++.++.+.
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (328)
T cd08268         271 EITLDPEARRRAIAFILDGLASGALK  296 (328)
T ss_pred             cccCCHHHHHHHHHHHHHHHHCCCCc
Confidence            31 112233    3344556566554

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08251 polyketide_synthase polyketide synthase

Probab=99.97  E-value=3.4e-28  Score=225.17  Aligned_cols=264  Identities=26%  Similarity=0.348  Sum_probs=211.0

Q ss_pred             cCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccC
Q 018072           30 VAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRS  108 (361)
Q Consensus        30 ~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~  108 (361)
                      .|++.+++++||+.++++|+.|+....+.++. ..+|.++|+|++|+|+++|+++.++++||+|+.....          
T Consensus         2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~----------   71 (303)
T cd08251           2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGE----------   71 (303)
T ss_pred             CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCC----------
Confidence            57788999999999999999999988775532 3568899999999999999999999999999854210          


Q ss_pred             CCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCChhhhhccccchhhhhhhhh
Q 018072          109 DVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL  188 (361)
Q Consensus       109 ~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~a~~  188 (361)
                                                           ..|+|++|+.++.+.++++|+++++++++.++.++.+||+++ 
T Consensus        72 -------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-  113 (303)
T cd08251          72 -------------------------------------SMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF-  113 (303)
T ss_pred             -------------------------------------CCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-
Confidence                                                 124899999999999999999999999999999999999986 


Q ss_pred             hhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCC-Cc
Q 018072          189 NVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GV  266 (361)
Q Consensus       189 ~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~-g~  266 (361)
                      +...+++|++|+|+|+ |.+|++++|+|+.+|. +|+++++++++.+.++++|++.+++....+  +.+.+..++++ ++
T Consensus       114 ~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~i~~~~~~~~~  190 (303)
T cd08251         114 ARAGLAKGEHILIQTATGGTGLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYVEED--FEEEIMRLTGGRGV  190 (303)
T ss_pred             HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCCcc--HHHHHHHHcCCCCc
Confidence            5788999999999976 9999999999999999 899999999999999999999888876654  77777777776 89


Q ss_pred             cEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCC--Cc----CCcHHHHHHHHH
Q 018072          267 DRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY--KP----RTDLPSVVDMYM  340 (361)
Q Consensus       267 Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~--~~----~~~~~~~~~~~~  340 (361)
                      |+++|++++ .....++++++++ |+++.+|.........+....+.++..+....+...  ..    .+.+.++++++.
T Consensus       191 d~v~~~~~~-~~~~~~~~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (303)
T cd08251         191 DVVINTLSG-EAIQKGLNCLAPG-GRYVEIAMTALKSAPSVDLSVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVE  268 (303)
T ss_pred             eEEEECCcH-HHHHHHHHHhccC-cEEEEEeccCCCccCccChhHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHH
Confidence            999999976 7888999999998 999999865422222233222334444433222111  01    134567788888


Q ss_pred             cCCccc
Q 018072          341 NKVIRF  346 (361)
Q Consensus       341 ~~~l~~  346 (361)
                      ++.++.
T Consensus       269 ~g~~~~  274 (303)
T cd08251         269 EGELRP  274 (303)
T ss_pred             CCCccC
Confidence            887753

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=99.97  E-value=3.4e-28  Score=225.61  Aligned_cols=272  Identities=24%  Similarity=0.336  Sum_probs=217.9

Q ss_pred             eeEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCC---CCCCCcccccceeEEEEEeCCCCCC
Q 018072           11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESVGEGVSD   85 (361)
Q Consensus        11 m~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~~G~~v~~   85 (361)
                      |||+++..++..  +++++.+.|.++++||+|||.++++|++|+..+.+...   ....|.++|||++|+|+++|+++..
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~   80 (309)
T cd05289           1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG   80 (309)
T ss_pred             CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence            789998887753  56777888888999999999999999999988876442   2345889999999999999999999


Q ss_pred             CCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECC
Q 018072           86 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN  165 (361)
Q Consensus        86 ~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP  165 (361)
                      +++||+|+..+..                                              ...|+|++|+.++.+.++++|
T Consensus        81 ~~~G~~V~~~~~~----------------------------------------------~~~g~~~~~~~~~~~~~~~~p  114 (309)
T cd05289          81 FKVGDEVFGMTPF----------------------------------------------TRGGAYAEYVVVPADELALKP  114 (309)
T ss_pred             CCCCCEEEEccCC----------------------------------------------CCCCcceeEEEecHHHhccCC
Confidence            9999999865310                                              001489999999999999999


Q ss_pred             CCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEE
Q 018072          166 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF  244 (361)
Q Consensus       166 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~v  244 (361)
                      +++++.+++.+++.+.++|+++.+...+.+|++|+|+|+ |.+|++++++++..|. +|+++..++ +.+.++++|++.+
T Consensus       115 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~-~~~~~~~~g~~~~  192 (309)
T cd05289         115 ANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIATASAA-NADFLRSLGADEV  192 (309)
T ss_pred             CCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecch-hHHHHHHcCCCEE
Confidence            999999999999899999998777677999999999997 9999999999999999 788887777 8888888998888


Q ss_pred             EcCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeee
Q 018072          245 VNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFF  323 (361)
Q Consensus       245 v~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~  323 (361)
                      ++....+  +.+    ...+ ++|+++|++++ .....++++++++ |+++.+|.......     ..+.+++++.....
T Consensus       193 ~~~~~~~--~~~----~~~~~~~d~v~~~~~~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~-----~~~~~~~~~~~~~~  259 (309)
T cd05289         193 IDYTKGD--FER----AAAPGGVDAVLDTVGG-ETLARSLALVKPG-GRLVSIAGPPPAEQ-----AAKRRGVRAGFVFV  259 (309)
T ss_pred             EeCCCCc--hhh----ccCCCCceEEEECCch-HHHHHHHHHHhcC-cEEEEEcCCCcchh-----hhhhccceEEEEEe
Confidence            8766544  332    2333 89999999998 4788999999998 99999987542111     22235666665543


Q ss_pred             cCCCcCCcHHHHHHHHHcCCcc
Q 018072          324 GNYKPRTDLPSVVDMYMNKVIR  345 (361)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~l~  345 (361)
                      ...  ...+++++++++++.++
T Consensus       260 ~~~--~~~~~~~~~~~~~~~~~  279 (309)
T cd05289         260 EPD--GEQLAELAELVEAGKLR  279 (309)
T ss_pred             ccc--HHHHHHHHHHHHCCCEE
Confidence            221  46788899999888764

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=99.97  E-value=1.1e-27  Score=223.57  Aligned_cols=279  Identities=30%  Similarity=0.492  Sum_probs=225.7

Q ss_pred             eeEEEeecCCCC--eEEEEeecCCCC-CCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCCCC
Q 018072           11 CKAAVAWEAGKP--LIIQDVEVAPPQ-AMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDL   86 (361)
Q Consensus        11 m~a~~~~~~~~~--~~~~~~~~p~~~-~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~~~   86 (361)
                      |+|+++..++.+  +++.+.+ |.+. +++++||+.++++|++|+..+.+.... ...|.++|||++|+|+.+|+++..+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~   79 (323)
T cd08241           1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF   79 (323)
T ss_pred             CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence            689998754433  7777777 7666 499999999999999999887765432 3346689999999999999999999


Q ss_pred             CCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCC
Q 018072           87 EVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP  166 (361)
Q Consensus        87 ~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~  166 (361)
                      ++||+|+..+.                                                 .|++++|+.++.+.++++|+
T Consensus        80 ~~G~~V~~~~~-------------------------------------------------~~~~~~~~~~~~~~~~~ip~  110 (323)
T cd08241          80 KVGDRVVALTG-------------------------------------------------QGGFAEEVVVPAAAVFPLPD  110 (323)
T ss_pred             CCCCEEEEecC-------------------------------------------------CceeEEEEEcCHHHceeCCC
Confidence            99999985420                                                 13799999999999999999


Q ss_pred             CCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEE
Q 018072          167 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV  245 (361)
Q Consensus       167 ~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv  245 (361)
                      +++..+++.+..++.+||+++.+...++++++|+|+|+ |++|++++++|+..|. .|+.++.++++.+.++++|++.++
T Consensus       111 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~  189 (323)
T cd08241         111 GLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVI  189 (323)
T ss_pred             CCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCceee
Confidence            99999988888899999998776788999999999998 9999999999999999 799999999999999999998887


Q ss_pred             cCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecCh-hhhccccEEEEeee
Q 018072          246 NTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVLNERTLKGTFF  323 (361)
Q Consensus       246 ~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~~~~~~l~g~~~  323 (361)
                      +....+  +.+.+...+++ ++|++++++|+ ..+..+++++++. |+++.+|....... .+.. ..+.+++++.+...
T Consensus       190 ~~~~~~--~~~~i~~~~~~~~~d~v~~~~g~-~~~~~~~~~~~~~-g~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  264 (323)
T cd08241         190 DYRDPD--LRERVKALTGGRGVDVVYDPVGG-DVFEASLRSLAWG-GRLLVIGFASGEIP-QIPANLLLLKNISVVGVYW  264 (323)
T ss_pred             ecCCcc--HHHHHHHHcCCCCcEEEEECccH-HHHHHHHHhhccC-CEEEEEccCCCCcC-cCCHHHHhhcCcEEEEEec
Confidence            766544  67777777766 89999999998 7888999999998 99999987542221 1222 22348899988775


Q ss_pred             cCCCc------CCcHHHHHHHHHcCCcc
Q 018072          324 GNYKP------RTDLPSVVDMYMNKVIR  345 (361)
Q Consensus       324 ~~~~~------~~~~~~~~~~~~~~~l~  345 (361)
                      ..+..      .+.++++++++.++.+.
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (323)
T cd08241         265 GAYARREPELLRANLAELFDLLAEGKIR  292 (323)
T ss_pred             ccccchhHHHHHHHHHHHHHHHHCCCcc
Confidence            54321      23567788888888764

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.96  E-value=2.2e-27  Score=223.30  Aligned_cols=280  Identities=23%  Similarity=0.331  Sum_probs=218.9

Q ss_pred             eEEEeecCCC--CeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCCCCCC
Q 018072           12 KAAVAWEAGK--PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEV   88 (361)
Q Consensus        12 ~a~~~~~~~~--~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~~~~~   88 (361)
                      ||+++...+.  .+.+.+.+.|.|.+++|+|||.++++|++|..++.+.... +..|.++|||++|+|+.+|+++.++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~   80 (337)
T cd08275           1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKV   80 (337)
T ss_pred             CeEEEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCC
Confidence            4666665554  2777788888889999999999999999999988775432 345778999999999999999999999


Q ss_pred             CCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCC
Q 018072           89 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA  168 (361)
Q Consensus        89 Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~  168 (361)
                      ||+|+....                                                 .|+|++|+.++.+.++++|+++
T Consensus        81 G~~V~~~~~-------------------------------------------------~~~~~~~~~~~~~~~~~ip~~~  111 (337)
T cd08275          81 GDRVMGLTR-------------------------------------------------FGGYAEVVNVPADQVFPLPDGM  111 (337)
T ss_pred             CCEEEEecC-------------------------------------------------CCeeeeEEEecHHHeEECCCCC
Confidence            999985421                                                 1379999999999999999999


Q ss_pred             ChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHHcCCCEEEc
Q 018072          169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFVN  246 (361)
Q Consensus       169 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~-g~~~Vi~~~~~~~~~~~~~~~G~~~vv~  246 (361)
                      ++.+++.+++++.++|+++.+...+++|++|+|+|+ |.+|++++++|+.. +. .++.. .++++.+.++++|++.+++
T Consensus       112 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~-~~~~~-~~~~~~~~~~~~g~~~~~~  189 (337)
T cd08275         112 SFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNV-TVVGT-ASASKHEALKENGVTHVID  189 (337)
T ss_pred             CHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCc-EEEEe-CCHHHHHHHHHcCCcEEee
Confidence            999999999999999999877888999999999998 99999999999998 33 33322 3456788888899988887


Q ss_pred             CCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCce--e-------------ecC-hh
Q 018072          247 TSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV--F-------------MTK-PI  310 (361)
Q Consensus       247 ~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~--~-------------~~~-~~  310 (361)
                      ....+  +.+.++..+++++|+++|++|+ .....++++++++ |+++.+|.......  .             ... ..
T Consensus       190 ~~~~~--~~~~~~~~~~~~~d~v~~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (337)
T cd08275         190 YRTQD--YVEEVKKISPEGVDIVLDALGG-EDTRKSYDLLKPM-GRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMK  265 (337)
T ss_pred             CCCCc--HHHHHHHHhCCCceEEEECCcH-HHHHHHHHhhccC-cEEEEEeecCCcCcccccccccccccccccccCHHH
Confidence            76554  7777777765689999999998 5778999999998 99999986542211  1             111 12


Q ss_pred             hhccccEEEEeeecCCCc-C----CcHHHHHHHHHcCCccc
Q 018072          311 NVLNERTLKGTFFGNYKP-R----TDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       311 ~~~~~~~l~g~~~~~~~~-~----~~~~~~~~~~~~~~l~~  346 (361)
                      .+.+++++.++....... .    ..+.++++++.++.+..
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (337)
T cd08275         266 LISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKP  306 (337)
T ss_pred             HhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCC
Confidence            234888988876542211 1    23567888888887653

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=99.96  E-value=2.7e-27  Score=217.19  Aligned_cols=253  Identities=23%  Similarity=0.291  Sum_probs=205.9

Q ss_pred             CeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCc
Q 018072           36 MEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCD  115 (361)
Q Consensus        36 ~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~  115 (361)
                      +|++|||.++++|++|+....+..  ..+|.++|||++|+|+++|+++..+++||+|+...                   
T Consensus         1 ~~v~i~v~~~~~~~~d~~~~~g~~--~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~-------------------   59 (293)
T cd05195           1 DEVEVEVKAAGLNFRDVLVALGLL--PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA-------------------   59 (293)
T ss_pred             CceEEEEEEEecCHHHHHHHhCCC--CCCCCccceeeeEEEEeecCCccCCCCCCEEEEEe-------------------
Confidence            589999999999999999887643  34578999999999999999999999999998541                   


Q ss_pred             ccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCChhhhhccccchhhhhhhhhhhcCCCC
Q 018072          116 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER  195 (361)
Q Consensus       116 ~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~  195 (361)
                                                     .|+|+||+.++.+.++++|+++++.+++.+++++.++|.++.+...+++
T Consensus        60 -------------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~  108 (293)
T cd05195          60 -------------------------------PGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQK  108 (293)
T ss_pred             -------------------------------cCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCC
Confidence                                           1389999999999999999999999999998899999999877788999


Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcC--CCEEEcCCCCCccHHHHHHHHcCC-CccEEEE
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG--VTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVE  271 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G--~~~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid  271 (361)
                      |++|+|+|+ |++|++++|+|+..|+ +|+++..++++.+.++++|  ++.+++....+  +.+.++.++.+ ++|+++|
T Consensus       109 g~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~  185 (293)
T cd05195         109 GESVLIHAAAGGVGQAAIQLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSSRDLS--FADGILRATGGRGVDVVLN  185 (293)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeecCchh--HHHHHHHHhCCCCceEEEe
Confidence            999999975 9999999999999999 8999989999999998888  67777765443  67777777766 8999999


Q ss_pred             ccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCCC--c----CCcHHHHHHHHHcCCcc
Q 018072          272 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK--P----RTDLPSVVDMYMNKVIR  345 (361)
Q Consensus       272 ~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~--~----~~~~~~~~~~~~~~~l~  345 (361)
                      ++|+. .+..++++++++ |+++.+|.........+....+.+++++.........  .    .+.+.++++++++++++
T Consensus       186 ~~~~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (293)
T cd05195         186 SLSGE-LLRASWRCLAPF-GRFVEIGKRDILSNSKLGMRPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLK  263 (293)
T ss_pred             CCCch-HHHHHHHhcccC-ceEEEeeccccccCCccchhhhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcc
Confidence            99985 889999999998 9999998765332222333333356666655432211  1    23467788888888775

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.96  E-value=6.1e-27  Score=218.65  Aligned_cols=266  Identities=24%  Similarity=0.307  Sum_probs=203.5

Q ss_pred             EEEEeecCCCCCCeEEEEEeEEecCccchhccccCCC---CCCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCC
Q 018072           24 IIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGEC  100 (361)
Q Consensus        24 ~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~c  100 (361)
                      ++++.+.|.|.++||+||++++++|++|+..+.|...   ....|..+|||++|+|+++|+++..+++||+|+.....  
T Consensus        15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~--   92 (319)
T cd08267          15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPP--   92 (319)
T ss_pred             ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccC--
Confidence            7788899999999999999999999999988776442   12346789999999999999999999999999854211  


Q ss_pred             CCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCChhhhhccccch
Q 018072          101 GDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV  180 (361)
Q Consensus       101 ~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~~~aa~l~~~~  180 (361)
                                                                  ...|+|++|+.++.+.++++|++++.++++.+++++
T Consensus        93 --------------------------------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~  128 (319)
T cd08267          93 --------------------------------------------KGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAG  128 (319)
T ss_pred             --------------------------------------------CCCceeeEEEEechhheEECCCCCCHHHHHhhhhHH
Confidence                                                        001389999999999999999999999999999999


Q ss_pred             hhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHH
Q 018072          181 STGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIA  259 (361)
Q Consensus       181 ~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~  259 (361)
                      .+||+++.+...+++|++|+|+|+ |++|++++++|+..|+ +|++++.+ ++.+.++++|++++++....+  +.   .
T Consensus       129 ~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~--~~---~  201 (319)
T cd08267         129 LTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYTTED--FV---A  201 (319)
T ss_pred             HHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCCCCC--cc---h
Confidence            999999777777999999999997 9999999999999999 88888765 888889999998888765544  32   3


Q ss_pred             HHcCC-CccEEEEccCCh-HHHHHHHHHhcCCCcEEEEEcCCCCCceeec---ChhhhccccEEEEeeecCCCcCCcHHH
Q 018072          260 EMTNG-GVDRSVECTGNI-DNMISAFECVHDGWGVAVLVGVPSKDAVFMT---KPINVLNERTLKGTFFGNYKPRTDLPS  334 (361)
Q Consensus       260 ~~~~~-g~Dvvid~~g~~-~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~---~~~~~~~~~~l~g~~~~~~~~~~~~~~  334 (361)
                      ..+.+ ++|++++++++. ......+..++++ |+++.+|..........   ..........+......  ...+.+++
T Consensus       202 ~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~-g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  278 (319)
T cd08267         202 LTAGGEKYDVIFDAVGNSPFSLYRASLALKPG-GRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAK--PNAEDLEQ  278 (319)
T ss_pred             hccCCCCCcEEEECCCchHHHHHHhhhccCCC-CEEEEeccccccccccccccchhhccccceEEEEEec--CCHHHHHH
Confidence            33444 899999999852 2333444448997 99999997653322221   11111222222222211  12567888


Q ss_pred             HHHHHHcCCcc
Q 018072          335 VVDMYMNKVIR  345 (361)
Q Consensus       335 ~~~~~~~~~l~  345 (361)
                      +++++++++++
T Consensus       279 ~~~~l~~~~~~  289 (319)
T cd08267         279 LAELVEEGKLK  289 (319)
T ss_pred             HHHHHHCCCee
Confidence            99999888765

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>smart00829 PKS_ER Enoylreductase

Probab=99.95  E-value=1.2e-26  Score=212.64  Aligned_cols=249  Identities=21%  Similarity=0.308  Sum_probs=202.4

Q ss_pred             EEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCccccc
Q 018072           40 IKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI  119 (361)
Q Consensus        40 Vkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~  119 (361)
                      |||.++++|++|+..+.+..+   .|.++|||++|+|+++|++++.+++||+|+...                       
T Consensus         2 i~v~~~~i~~~d~~~~~g~~~---~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~-----------------------   55 (288)
T smart00829        2 VEVRAAGLNFRDVLIALGLLP---GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA-----------------------   55 (288)
T ss_pred             eeEEEEecCHHHHHHhcCCCC---CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc-----------------------
Confidence            899999999999998876543   367899999999999999999999999998431                       


Q ss_pred             CCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEE
Q 018072          120 NPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV  199 (361)
Q Consensus       120 ~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~V  199 (361)
                                                 .|+|++|+.++.+.++++|+++++.+++.+++++.++|+++.+...+++|++|
T Consensus        56 ---------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~v  108 (288)
T smart00829       56 ---------------------------PGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESV  108 (288)
T ss_pred             ---------------------------CCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEE
Confidence                                       13899999999999999999999999999999999999987778889999999


Q ss_pred             EEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCC--CEEEcCCCCCccHHHHHHHHcCC-CccEEEEccCC
Q 018072          200 AVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--TDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGN  275 (361)
Q Consensus       200 lI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~--~~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~  275 (361)
                      +|+|+ |.+|++++++|+..|+ +|+++++++++.++++++|+  +.++++...+  +.+.+..+..+ ++|+++|++++
T Consensus       109 lv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~~~~  185 (288)
T smart00829      109 LIHAAAGGVGQAAIQLAQHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSRDLS--FADEILRATGGRGVDVVLNSLAG  185 (288)
T ss_pred             EEecCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCCCcc--HHHHHHHHhCCCCcEEEEeCCCH
Confidence            99986 9999999999999999 89999999999999999998  6777766544  67777777765 89999999996


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCCC-----cCCcHHHHHHHHHcCCccc
Q 018072          276 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK-----PRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       276 ~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~-----~~~~~~~~~~~~~~~~l~~  346 (361)
                       ..+..++++++++ |+++.+|.........++...+.+++++.+.......     ..+.+.+++++++++++..
T Consensus       186 -~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (288)
T smart00829      186 -EFLDASLRCLAPG-GRFVEIGKRDIRDNSQLGMAPFRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRP  259 (288)
T ss_pred             -HHHHHHHHhccCC-cEEEEEcCcCCccccccchhhhcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccC
Confidence             7888999999998 9999998754222222333333467777665432111     1224567788888887754

Enoylreductase in Polyketide synthases.

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=99.94  E-value=5.8e-25  Score=193.83  Aligned_cols=264  Identities=20%  Similarity=0.244  Sum_probs=203.5

Q ss_pred             EEEeecC-CCCCCeEEEEEeEEecCccchhccccCCCC-CCCCccccc----ceeEEEEEeCCCCCCCCCCCEEeecCCC
Q 018072           25 IQDVEVA-PPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGH----EAAGVVESVGEGVSDLEVGDHVLPVFTG   98 (361)
Q Consensus        25 ~~~~~~p-~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~----e~~G~V~~~G~~v~~~~~Gd~V~~~~~~   98 (361)
                      .++.+++ ++++++||||.++-+.++..+..++.-.+. .-.|+.+|-    .++|+|++  |+..+|++||.|.     
T Consensus        26 ~~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~kVi~--S~~~~~~~GD~v~-----   98 (343)
T KOG1196|consen   26 TTTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAKVID--SGHPNYKKGDLVW-----   98 (343)
T ss_pred             eeeecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEEEEe--cCCCCCCcCceEE-----
Confidence            3444444 458899999999999998776655432221 112444443    67899999  5668899999997     


Q ss_pred             CCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEecc--ceEECCC--CCChhh-h
Q 018072           99 ECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINP--LAPLDK-V  173 (361)
Q Consensus        99 ~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~--~~~~iP~--~~~~~~-a  173 (361)
                                               |+.                      +|.||.+++.+  ..++||.  +.++.. .
T Consensus        99 -------------------------g~~----------------------gWeeysii~~~~~~~~ki~~~~~~pLs~yl  131 (343)
T KOG1196|consen   99 -------------------------GIV----------------------GWEEYSVITPNDLEHFKIQHPTDVPLSYYL  131 (343)
T ss_pred             -------------------------Eec----------------------cceEEEEecCcchhcccCCCCCccCHhhhh
Confidence                                     433                      79999999764  3555543  333322 3


Q ss_pred             hccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCEEEcCCCCC
Q 018072          174 CILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHD  251 (361)
Q Consensus       174 a~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~vv~~~~~~  251 (361)
                      .++..+..|||..+++...++.|++|+|-|| |.+|+++.|+|+.+|. .|+++..++||..+++. +|.+..+||+++.
T Consensus       132 g~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~  210 (343)
T KOG1196|consen  132 GLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKEES  210 (343)
T ss_pred             hccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEEEecCChhhhhhhHhccCCccceeccCcc
Confidence            3466689999999999999999999999987 9999999999999999 99999999999999875 7999999999873


Q ss_pred             ccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCce---eecC--hhhhccccEEEEeeecCC
Q 018072          252 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV---FMTK--PINVLNERTLKGTFFGNY  326 (361)
Q Consensus       252 ~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~---~~~~--~~~~~~~~~l~g~~~~~~  326 (361)
                       +..+.++...++|+|+.||++|+ ..+++.+..|+.+ ||+++||..++...   ..+.  ...+.|++++.|+....+
T Consensus       211 -~~~~aL~r~~P~GIDiYfeNVGG-~~lDavl~nM~~~-gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~  287 (343)
T KOG1196|consen  211 -DLSAALKRCFPEGIDIYFENVGG-KMLDAVLLNMNLH-GRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDY  287 (343)
T ss_pred             -CHHHHHHHhCCCcceEEEeccCc-HHHHHHHHhhhhc-cceEeeeeehhccccCCccccchhhheeeeEEeeeEEeech
Confidence             28889999888899999999999 8999999999998 99999998764322   1111  122339999999876665


Q ss_pred             Cc--CCcHHHHHHHHHcCCccc
Q 018072          327 KP--RTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       327 ~~--~~~~~~~~~~~~~~~l~~  346 (361)
                      .+  .+-++.+..++++|||..
T Consensus       288 ~d~~~k~ld~l~~~ikegKI~y  309 (343)
T KOG1196|consen  288 LDKYPKFLDFLLPYIKEGKITY  309 (343)
T ss_pred             hhhhHHHHHHHHHHHhcCceEE
Confidence            32  344577889999999964

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.93  E-value=6.9e-24  Score=194.72  Aligned_cols=217  Identities=26%  Similarity=0.371  Sum_probs=174.9

Q ss_pred             CCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCcc
Q 018072           62 PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPV  141 (361)
Q Consensus        62 ~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~  141 (361)
                      .++|.++|||++|+|+++|++++.+++||+|+..                                              
T Consensus        18 ~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~----------------------------------------------   51 (277)
T cd08255          18 LPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF----------------------------------------------   51 (277)
T ss_pred             CcCCcccCcceeEEEEEeCCCCCCCCCCCEEEec----------------------------------------------
Confidence            3478999999999999999999999999999843                                              


Q ss_pred             ccccCcccceeeEEEeccceEECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCC
Q 018072          142 NHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGAS  221 (361)
Q Consensus       142 ~~~~~~G~~ae~v~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~  221 (361)
                            +.|++|+.++.+.++++|+++++++++.+ +++.+||+++ ...++++|++++|+|+|.+|++++++|+.+|..
T Consensus        52 ------~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~  123 (277)
T cd08255          52 ------GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGLVGLLAAQLAKAAGAR  123 (277)
T ss_pred             ------CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence                  15899999999999999999999998888 6899999985 578899999999998899999999999999994


Q ss_pred             eEEEEcCChhhHHHHHHcC-CCEEEcCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCC
Q 018072          222 RIIGVDRSSKRFEEAKKFG-VTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP  299 (361)
Q Consensus       222 ~Vi~~~~~~~~~~~~~~~G-~~~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~  299 (361)
                      +|+++++++++.+.++++| ++.+++...          ..+.+ ++|++||+++....+..++++++++ |+++.+|..
T Consensus       124 ~vi~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~-g~~~~~g~~  192 (277)
T cd08255         124 EVVGVDPDAARRELAEALGPADPVAADTA----------DEIGGRGADVVIEASGSPSALETALRLLRDR-GRVVLVGWY  192 (277)
T ss_pred             cEEEECCCHHHHHHHHHcCCCccccccch----------hhhcCCCCCEEEEccCChHHHHHHHHHhcCC-cEEEEEecc
Confidence            4999999999999999999 444443221          11233 8999999999878889999999998 999999976


Q ss_pred             CCCceeecChhhhc-cccEEEEeeecCCC---------cCCcHHHHHHHHHcCCcc
Q 018072          300 SKDAVFMTKPINVL-NERTLKGTFFGNYK---------PRTDLPSVVDMYMNKVIR  345 (361)
Q Consensus       300 ~~~~~~~~~~~~~~-~~~~l~g~~~~~~~---------~~~~~~~~~~~~~~~~l~  345 (361)
                      ... ..... ..+. +.+++.+.......         ..+.+++++++++++++.
T Consensus       193 ~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~  246 (277)
T cd08255         193 GLK-PLLLG-EEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLE  246 (277)
T ss_pred             CCC-ccccH-HHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCcc
Confidence            533 22221 2223 66677776543221         125688999999988864

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=99.90  E-value=1.1e-23  Score=166.07  Aligned_cols=108  Identities=36%  Similarity=0.649  Sum_probs=94.2

Q ss_pred             CCeEEEEEeEEecCccchhcccc-CCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCCC
Q 018072           35 AMEVRIKIKYTSLCRTDLYFWES-KGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNM  113 (361)
Q Consensus        35 ~~evlVkv~~~~i~~~D~~~~~g-~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~  113 (361)
                      |+||||||+++|||++|++++.+ .....++|.++|||++|+|+++|+++++|++||+|++.+...|+.|+.|..+..++
T Consensus         1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~   80 (109)
T PF08240_consen    1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL   80 (109)
T ss_dssp             TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred             CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence            68999999999999999999998 45567899999999999999999999999999999999999999999999999999


Q ss_pred             CcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEEC
Q 018072          114 CDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI  164 (361)
Q Consensus       114 c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~i  164 (361)
                      |.+....   |.. .                  .|+||||+++|+++++|+
T Consensus        81 c~~~~~~---g~~-~------------------~G~~aey~~v~~~~~~~v  109 (109)
T PF08240_consen   81 CPNPEVL---GLG-L------------------DGGFAEYVVVPARNLVPV  109 (109)
T ss_dssp             TTTBEET---TTS-S------------------TCSSBSEEEEEGGGEEEE
T ss_pred             CCCCCEe---EcC-C------------------CCcccCeEEEehHHEEEC
Confidence            9877655   322 2                  349999999999999985

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.89  E-value=6.3e-23  Score=205.47  Aligned_cols=255  Identities=16%  Similarity=0.175  Sum_probs=206.4

Q ss_pred             eEEEEeecC---CCCCCeEEEEEeEEecCccchhccccCCCCCCC-------CcccccceeEEEEEeCCCCCCCCCCCEE
Q 018072           23 LIIQDVEVA---PPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF-------PRIFGHEAAGVVESVGEGVSDLEVGDHV   92 (361)
Q Consensus        23 ~~~~~~~~p---~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~-------p~~~G~e~~G~V~~~G~~v~~~~~Gd~V   92 (361)
                      +++.+-|..   +..++.=+.-|-++.+|+.|+.+..|+-+....       ..++|-||+||-.          -|.||
T Consensus      1429 lrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGRd~----------~GrRv 1498 (2376)
T KOG1202|consen 1429 LRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGRDA----------SGRRV 1498 (2376)
T ss_pred             eeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccccC----------CCcEE
Confidence            556665554   236677799999999999999999987654332       4688999988744          49999


Q ss_pred             eecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCChhh
Q 018072           93 LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK  172 (361)
Q Consensus        93 ~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~~~  172 (361)
                      ...                              .+.                   -++|+.+.++.+++|.+|.+...++
T Consensus      1499 M~m------------------------------vpA-------------------ksLATt~l~~rd~lWevP~~WTlee 1529 (2376)
T KOG1202|consen 1499 MGM------------------------------VPA-------------------KSLATTVLASRDFLWEVPSKWTLEE 1529 (2376)
T ss_pred             EEe------------------------------eeh-------------------hhhhhhhhcchhhhhhCCcccchhh
Confidence            833                              111                   1689999999999999999999999


Q ss_pred             hhccccchhhhhhhhhhhcCCCCCCEEEEEc-CCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc----CCCEEEcC
Q 018072          173 VCILSCGVSTGLGATLNVAKPERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNT  247 (361)
Q Consensus       173 aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G-~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~----G~~~vv~~  247 (361)
                      |++.|+.+.|+|+|+..+.+.|+|+++||++ +|++|++|+.+|.+.|. +|+.+..++||++++.+.    -.+.+-|.
T Consensus      1530 AstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~NS 1608 (2376)
T KOG1202|consen 1530 ASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFANS 1608 (2376)
T ss_pred             cccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhccccc
Confidence            9999999999999999999999999999995 59999999999999999 999999999999998763    33445555


Q ss_pred             CCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCC
Q 018072          248 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY  326 (361)
Q Consensus       248 ~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~  326 (361)
                      .+.+  |...+.+.+.| |+|+|+++... +.++++++||+.+ ||+..+|...-..+-++-+..++|+.+++|...-+.
T Consensus      1609 Rdts--FEq~vl~~T~GrGVdlVLNSLae-EkLQASiRCLa~~-GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsv 1684 (2376)
T KOG1202|consen 1609 RDTS--FEQHVLWHTKGRGVDLVLNSLAE-EKLQASIRCLALH-GRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSV 1684 (2376)
T ss_pred             cccc--HHHHHHHHhcCCCeeeehhhhhH-HHHHHHHHHHHhc-CeeeeecceecccCCcchhhhhhcccceeeeehhhh
Confidence            5555  88899999998 99999999977 7889999999999 999999987755666666666779999999875554


Q ss_pred             Cc--CCcHHHHHHHHHc
Q 018072          327 KP--RTDLPSVVDMYMN  341 (361)
Q Consensus       327 ~~--~~~~~~~~~~~~~  341 (361)
                      ..  .+++.++..++++
T Consensus      1685 mege~e~~~ev~~Lv~e 1701 (2376)
T KOG1202|consen 1685 MEGEEEMWREVAALVAE 1701 (2376)
T ss_pred             hcCcHHHHHHHHHHHHh
Confidence            32  2345555555443

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.77  E-value=6.3e-18  Score=137.35  Aligned_cols=128  Identities=32%  Similarity=0.558  Sum_probs=114.5

Q ss_pred             HHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHH
Q 018072          206 AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFE  284 (361)
Q Consensus       206 ~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~  284 (361)
                      ++|++++|+|+..|. +|++++++++|+++++++|+++++++.+.+  +.+.+++++++ ++|+||||+|+++.++.+++
T Consensus         1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~--~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~   77 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSDDD--FVEQIRELTGGRGVDVVIDCVGSGDTLQEAIK   77 (130)
T ss_dssp             HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTTSS--HHHHHHHHTTTSSEEEEEESSSSHHHHHHHHH
T ss_pred             ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccccc--cccccccccccccceEEEEecCcHHHHHHHHH
Confidence            689999999999995 999999999999999999999999998887  99999999988 99999999998899999999


Q ss_pred             HhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeecCCCcCCcHHHHHHHHHc
Q 018072          285 CVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKPRTDLPSVVDMYMN  341 (361)
Q Consensus       285 ~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~~~~~~~~~~~~~~~~~~  341 (361)
                      +++++ |+++++|... .....++...++ +++++.|++.++   +++++++++++.+
T Consensus        78 ~l~~~-G~~v~vg~~~-~~~~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~~la~  130 (130)
T PF00107_consen   78 LLRPG-GRIVVVGVYG-GDPISFNLMNLMFKEITIRGSWGGS---PEDFQEALQLLAQ  130 (130)
T ss_dssp             HEEEE-EEEEEESSTS-TSEEEEEHHHHHHTTEEEEEESSGG---HHHHHHHHHHHH-
T ss_pred             HhccC-CEEEEEEccC-CCCCCCCHHHHHhCCcEEEEEccCC---HHHHHHHHHHhcC
Confidence            99998 9999999987 445555555555 999999998776   5899999998864

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=99.40  E-value=5.4e-12  Score=123.52  Aligned_cols=148  Identities=18%  Similarity=0.190  Sum_probs=108.8

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEE-EcCCCCC-----------ccHHHHHH
Q 018072          192 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHD-----------RPIQEVIA  259 (361)
Q Consensus       192 ~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~v-v~~~~~~-----------~~~~~~i~  259 (361)
                      +..++++|+|+|+|++|+++++.|+.+|+ +|+++|.+++|++.++++|++.+ ++..+.+           .++.+...
T Consensus       161 G~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~  239 (509)
T PRK09424        161 GKVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM  239 (509)
T ss_pred             CCcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence            35789999999999999999999999999 89999999999999999999854 5543211           12223323


Q ss_pred             HH-cC--CCccEEEEccCChH-----HH-HHHHHHhcCCCcEEEEEcCCCCC-ceeecChhhh-c-cccEEEEeeecCCC
Q 018072          260 EM-TN--GGVDRSVECTGNID-----NM-ISAFECVHDGWGVAVLVGVPSKD-AVFMTKPINV-L-NERTLKGTFFGNYK  327 (361)
Q Consensus       260 ~~-~~--~g~Dvvid~~g~~~-----~~-~~~~~~l~~~~G~iv~~g~~~~~-~~~~~~~~~~-~-~~~~l~g~~~~~~~  327 (361)
                      +. .+  +++|++|+|++.+.     .+ +.+++.++++ |+++.+|...+. .+...+...+ . +++++.|.+.  . 
T Consensus       240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpG-gvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n--~-  315 (509)
T PRK09424        240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPG-SVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTD--L-  315 (509)
T ss_pred             HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCC-CEEEEEccCCCCCcccccCccceEeECCEEEEEeCC--C-
Confidence            32 33  37999999999633     54 8999999997 999999985322 2333332333 3 7999998872  2 


Q ss_pred             cCCcHH-HHHHHHHcCCcc
Q 018072          328 PRTDLP-SVVDMYMNKVIR  345 (361)
Q Consensus       328 ~~~~~~-~~~~~~~~~~l~  345 (361)
                       +.++. ++.+++.++.++
T Consensus       316 -P~~~p~~As~lla~~~i~  333 (509)
T PRK09424        316 -PSRLPTQSSQLYGTNLVN  333 (509)
T ss_pred             -chhHHHHHHHHHHhCCcc
Confidence             24565 578888877764

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=99.24  E-value=2.2e-10  Score=109.65  Aligned_cols=143  Identities=22%  Similarity=0.224  Sum_probs=109.2

Q ss_pred             hhhhhhhcC-CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHc
Q 018072          184 LGATLNVAK-PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT  262 (361)
Q Consensus       184 ~~a~~~~~~-~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~  262 (361)
                      |.++.+..+ .-+|++|+|+|+|++|+.+++.++.+|+ +|++++.++.|++.++.+|++.+.        ..+.+    
T Consensus       189 ~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~~--------~~e~v----  255 (413)
T cd00401         189 IDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVMT--------MEEAV----  255 (413)
T ss_pred             HHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEcc--------HHHHH----
Confidence            444444434 4789999999999999999999999999 899999999999999999985431        21222    


Q ss_pred             CCCccEEEEccCChHHHHHH-HHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeecCCCcCCcHH--HHHHH
Q 018072          263 NGGVDRSVECTGNIDNMISA-FECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKPRTDLP--SVVDM  338 (361)
Q Consensus       263 ~~g~Dvvid~~g~~~~~~~~-~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~~~~~~~~~~--~~~~~  338 (361)
                       .++|+||+++|++..+... ++.++++ |+++.+|..  ..+++  ...+. +++++.++.....  ..+++  +.+.+
T Consensus       256 -~~aDVVI~atG~~~~i~~~~l~~mk~G-gilvnvG~~--~~eId--~~~L~~~el~i~g~~~~~~--~~~~~~g~aI~L  327 (413)
T cd00401         256 -KEGDIFVTTTGNKDIITGEHFEQMKDG-AIVCNIGHF--DVEID--VKGLKENAVEVVNIKPQVD--RYELPDGRRIIL  327 (413)
T ss_pred             -cCCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEeCCC--CCccC--HHHHHhhccEEEEccCCcc--eEEcCCcchhhh
Confidence             2589999999998888876 9999997 999999954  23344  33344 8899988864331  22556  79999


Q ss_pred             HHcCCc-ccC
Q 018072          339 YMNKVI-RFS  347 (361)
Q Consensus       339 ~~~~~l-~~~  347 (361)
                      +.+|++ ++.
T Consensus       328 La~Grlvnl~  337 (413)
T cd00401         328 LAEGRLVNLG  337 (413)
T ss_pred             hhCcCCCCCc
Confidence            999998 554

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.65  E-value=3.9e-07  Score=89.37  Aligned_cols=126  Identities=21%  Similarity=0.225  Sum_probs=90.1

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEE-EcCCCC-----------CccHHHHHHHH
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEH-----------DRPIQEVIAEM  261 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~v-v~~~~~-----------~~~~~~~i~~~  261 (361)
                      .++++|+|+|+|.+|++++++|+.+|+ .|++++.++++++.++++|++.+ ++..+.           ..++.+...++
T Consensus       162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~  240 (511)
T TIGR00561       162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL  240 (511)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence            467999999999999999999999999 79999999999999999999763 322110           01233333333


Q ss_pred             cC---CCccEEEEcc---CChH---HHHHHHHHhcCCCcEEEEEcCCCCCceeec-Chhhhc---cccEEEEee
Q 018072          262 TN---GGVDRSVECT---GNID---NMISAFECVHDGWGVAVLVGVPSKDAVFMT-KPINVL---NERTLKGTF  322 (361)
Q Consensus       262 ~~---~g~Dvvid~~---g~~~---~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~-~~~~~~---~~~~l~g~~  322 (361)
                      ..   .++|++|+|+   |.+.   ..+..++.|+++ +.++.++...+. .+.+ .+...+   .++++.|..
T Consensus       241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpG-svIVDlA~d~GG-n~E~t~p~~~~~~~~GV~~~gv~  312 (511)
T TIGR00561       241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAG-SVIVDLAAEQGG-NCEYTKPGEVYTTENQVKVIGYT  312 (511)
T ss_pred             HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCC-CEEEEeeeCCCC-CEEEecCceEEEecCCEEEEeeC
Confidence            32   2799999999   6544   456789999997 999999876544 2222 222222   357877754

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.44  E-value=2.6e-06  Score=82.00  Aligned_cols=104  Identities=26%  Similarity=0.272  Sum_probs=80.9

Q ss_pred             hhhhhhhhhcCCC-CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHH
Q 018072          182 TGLGATLNVAKPE-RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAE  260 (361)
Q Consensus       182 ta~~a~~~~~~~~-~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~  260 (361)
                      ..|.++.+..++. .|++|+|+|.|.+|...++.++.+|+ +|+++++++.|...+...|++ +.+       +.+.+  
T Consensus       197 s~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~~-------l~eal--  265 (425)
T PRK05476        197 SLLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VMT-------MEEAA--  265 (425)
T ss_pred             hhHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ecC-------HHHHH--
Confidence            3455544433544 89999999999999999999999999 899999999888777777764 221       22222  


Q ss_pred             HcCCCccEEEEccCChHHHH-HHHHHhcCCCcEEEEEcCCC
Q 018072          261 MTNGGVDRSVECTGNIDNMI-SAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       261 ~~~~g~Dvvid~~g~~~~~~-~~~~~l~~~~G~iv~~g~~~  300 (361)
                         .++|+||+++|....+. ..++.++++ +.++.+|...
T Consensus       266 ---~~aDVVI~aTG~~~vI~~~~~~~mK~G-ailiNvG~~d  302 (425)
T PRK05476        266 ---ELGDIFVTATGNKDVITAEHMEAMKDG-AILANIGHFD  302 (425)
T ss_pred             ---hCCCEEEECCCCHHHHHHHHHhcCCCC-CEEEEcCCCC
Confidence               26899999999977776 688889997 9999998765

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=98.33  E-value=3.9e-08  Score=95.42  Aligned_cols=160  Identities=18%  Similarity=0.238  Sum_probs=107.0

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccC
Q 018072           67 IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLG  146 (361)
Q Consensus        67 ~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~  146 (361)
                      .-|.|+++.+.++++++++     .|+..+.+ ||.|..|    ++.|.+....   |..         .+         
T Consensus        89 ~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~~---g~~---------l~---------  137 (417)
T TIGR01035        89 LTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKTV---GKV---------LE---------  137 (417)
T ss_pred             cCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCCc---hHH---------HH---------
Confidence            4678899999999998776     67777777 9999999    6666655444   321         11         


Q ss_pred             cccceeeEEEeccceEE---C-CCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCe
Q 018072          147 TSTFSEYTVVHSGCVAK---I-NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASR  222 (361)
Q Consensus       147 ~G~~ae~v~v~~~~~~~---i-P~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~  222 (361)
                       +.|++++.++. .+..   | +..+|...+|.         ....+..+..++++|+|+|+|.+|..+++.++..|..+
T Consensus       138 -~lf~~a~~~~k-~vr~~t~i~~~~vSv~~~Av---------~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~  206 (417)
T TIGR01035       138 -RLFQKAFSVGK-RVRTETDISAGAVSISSAAV---------ELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGK  206 (417)
T ss_pred             -HHHHHHHHHhh-hhhhhcCCCCCCcCHHHHHH---------HHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCE
Confidence             37999988876 3332   3 22333222211         00123334467899999999999999999999999668


Q ss_pred             EEEEcCChhhHH-HHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHH
Q 018072          223 IIGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDN  278 (361)
Q Consensus       223 Vi~~~~~~~~~~-~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~  278 (361)
                      |++++++.++.+ +++++|.. .+...    +..+.+     .++|+||++++.+..
T Consensus       207 V~v~~rs~~ra~~la~~~g~~-~i~~~----~l~~~l-----~~aDvVi~aT~s~~~  253 (417)
T TIGR01035       207 ILIANRTYERAEDLAKELGGE-AVKFE----DLEEYL-----AEADIVISSTGAPHP  253 (417)
T ss_pred             EEEEeCCHHHHHHHHHHcCCe-EeeHH----HHHHHH-----hhCCEEEECCCCCCc
Confidence            999999988755 66667763 22211    122222     268999999987664

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>TIGR00936 ahcY adenosylhomocysteinase

Probab=98.31  E-value=9.1e-06  Score=77.86  Aligned_cols=102  Identities=28%  Similarity=0.320  Sum_probs=79.4

Q ss_pred             hhhhhhhcC-CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHc
Q 018072          184 LGATLNVAK-PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT  262 (361)
Q Consensus       184 ~~a~~~~~~-~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~  262 (361)
                      +.++.+..+ .-.|++|+|+|.|.+|+..++.++.+|+ +|++++.++.+...+...|+. +.+       ..+.+    
T Consensus       182 ~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-------leeal----  248 (406)
T TIGR00936       182 IDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VMT-------MEEAA----  248 (406)
T ss_pred             HHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eCC-------HHHHH----
Confidence            344334333 4789999999999999999999999999 899999999888777777763 221       22222    


Q ss_pred             CCCccEEEEccCChHHHHH-HHHHhcCCCcEEEEEcCCC
Q 018072          263 NGGVDRSVECTGNIDNMIS-AFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       263 ~~g~Dvvid~~g~~~~~~~-~~~~l~~~~G~iv~~g~~~  300 (361)
                       .+.|++|+++|....+.. .+..++++ +.++.+|...
T Consensus       249 -~~aDVVItaTG~~~vI~~~~~~~mK~G-ailiN~G~~~  285 (406)
T TIGR00936       249 -KIGDIFITATGNKDVIRGEHFENMKDG-AIVANIGHFD  285 (406)
T ss_pred             -hcCCEEEECCCCHHHHHHHHHhcCCCC-cEEEEECCCC
Confidence             257999999999888874 88889997 9999998754

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.21  E-value=3.8e-05  Score=71.13  Aligned_cols=111  Identities=17%  Similarity=0.219  Sum_probs=82.3

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      .+.+|+|+|.|.+|+.+++.++.+|+ +|+++++++++.+.++++|++.+ .       + +.+.+.. .++|+||++++
T Consensus       151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~-~-------~-~~l~~~l-~~aDiVI~t~p  219 (296)
T PRK08306        151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPF-H-------L-SELAEEV-GKIDIIFNTIP  219 (296)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeee-c-------H-HHHHHHh-CCCCEEEECCC
Confidence            68999999999999999999999999 99999999999888888887532 1       1 1122222 26899999997


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEE
Q 018072          275 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKG  320 (361)
Q Consensus       275 ~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g  320 (361)
                      ..-.-+..++.++++ +.++.++...+...+.   ..-.++++..+
T Consensus       220 ~~~i~~~~l~~~~~g-~vIIDla~~pggtd~~---~a~~~Gv~~~~  261 (296)
T PRK08306        220 ALVLTKEVLSKMPPE-ALIIDLASKPGGTDFE---YAEKRGIKALL  261 (296)
T ss_pred             hhhhhHHHHHcCCCC-cEEEEEccCCCCcCee---ehhhCCeEEEE
Confidence            643445777889997 9999998776554432   11126666654

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=98.20  E-value=2.7e-06  Score=77.92  Aligned_cols=104  Identities=23%  Similarity=0.355  Sum_probs=73.7

Q ss_pred             hcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHHc----CCCEEEcCCCCCccHHHHHHHHcCC
Q 018072          190 VAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNG  264 (361)
Q Consensus       190 ~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~~----G~~~vv~~~~~~~~~~~~i~~~~~~  264 (361)
                      .+.+++|++||.+|+|. |..+.++++..+. .+|+++|.+++.++.+++.    +...+. ....+  +.+ + .+.++
T Consensus        72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~-~~~~d--~~~-l-~~~~~  145 (272)
T PRK11873         72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVE-FRLGE--IEA-L-PVADN  145 (272)
T ss_pred             hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEE-EEEcc--hhh-C-CCCCC
Confidence            46688999999999988 8888888888775 3799999999999988763    433221 11111  111 0 12234


Q ss_pred             CccEEEEcc------CChHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072          265 GVDRSVECT------GNIDNMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       265 g~Dvvid~~------g~~~~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      .||+|+...      ..+..+..+.+.|+++ |++++.+...
T Consensus       146 ~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpG-G~l~i~~~~~  186 (272)
T PRK11873        146 SVDVIISNCVINLSPDKERVFKEAFRVLKPG-GRFAISDVVL  186 (272)
T ss_pred             ceeEEEEcCcccCCCCHHHHHHHHHHHcCCC-cEEEEEEeec
Confidence            799998653      3346789999999998 9999887544

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=98.19  E-value=3.1e-05  Score=70.08  Aligned_cols=132  Identities=20%  Similarity=0.179  Sum_probs=84.0

Q ss_pred             cceeeEEEeccceEECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcC
Q 018072          149 TFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR  228 (361)
Q Consensus       149 ~~ae~v~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~  228 (361)
                      +|.+|.. +...++.+++++++..+.--. ... ....+.  ..++++++||-+|+|. |.+++.+++ .|..+|+++|.
T Consensus        78 ~~~~~~~-~~~~~i~i~p~~afgtg~h~t-t~~-~l~~l~--~~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDi  150 (250)
T PRK00517         78 SWEDPPD-PDEINIELDPGMAFGTGTHPT-TRL-CLEALE--KLVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDI  150 (250)
T ss_pred             CCcCCCC-CCeEEEEECCCCccCCCCCHH-HHH-HHHHHH--hhcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEEC
Confidence            4666644 667788898887765543111 111 111111  1257899999999987 888776554 67757999999


Q ss_pred             ChhhHHHHHHc----CCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCCh---HHHHHHHHHhcCCCcEEEEEcCCC
Q 018072          229 SSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI---DNMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       229 ~~~~~~~~~~~----G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~---~~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      ++...+.+++.    +....+.....+            ..||+|+.+....   ..+..+.+.|+++ |++++.|...
T Consensus       151 s~~~l~~A~~n~~~~~~~~~~~~~~~~------------~~fD~Vvani~~~~~~~l~~~~~~~Lkpg-G~lilsgi~~  216 (250)
T PRK00517        151 DPQAVEAARENAELNGVELNVYLPQGD------------LKADVIVANILANPLLELAPDLARLLKPG-GRLILSGILE  216 (250)
T ss_pred             CHHHHHHHHHHHHHcCCCceEEEccCC------------CCcCEEEEcCcHHHHHHHHHHHHHhcCCC-cEEEEEECcH
Confidence            99988887653    321111111110            1589999766542   2456788889998 9999987654

>PLN02494 adenosylhomocysteinase

Probab=98.16  E-value=2.2e-05  Score=75.98  Aligned_cols=102  Identities=21%  Similarity=0.283  Sum_probs=80.1

Q ss_pred             hhhhhhhcCC-CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHc
Q 018072          184 LGATLNVAKP-ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT  262 (361)
Q Consensus       184 ~~a~~~~~~~-~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~  262 (361)
                      +.++.+..++ -.|++|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|+..+      +  ..+.+    
T Consensus       241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~vv------~--leEal----  307 (477)
T PLN02494        241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQVL------T--LEDVV----  307 (477)
T ss_pred             HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCeec------c--HHHHH----
Confidence            4444444343 679999999999999999999999999 89999999988777777777532      1  22222    


Q ss_pred             CCCccEEEEccCChHHH-HHHHHHhcCCCcEEEEEcCCC
Q 018072          263 NGGVDRSVECTGNIDNM-ISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       263 ~~g~Dvvid~~g~~~~~-~~~~~~l~~~~G~iv~~g~~~  300 (361)
                       ...|++++++|....+ ...++.|+++ +.++.+|...
T Consensus       308 -~~ADVVI~tTGt~~vI~~e~L~~MK~G-AiLiNvGr~~  344 (477)
T PLN02494        308 -SEADIFVTTTGNKDIIMVDHMRKMKNN-AIVCNIGHFD  344 (477)
T ss_pred             -hhCCEEEECCCCccchHHHHHhcCCCC-CEEEEcCCCC
Confidence             2479999999987664 7899999998 9999999753

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=98.12  E-value=1e-05  Score=69.81  Aligned_cols=118  Identities=20%  Similarity=0.285  Sum_probs=86.5

Q ss_pred             CCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCC
Q 018072          166 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGV  241 (361)
Q Consensus       166 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~  241 (361)
                      ..++....-.+..+...|..  .+...+++|++||=+|+|. |+.++-+|+..+  +|+.+++.++-.+.+    +.+|.
T Consensus        45 ~~lpi~~gqtis~P~~vA~m--~~~L~~~~g~~VLEIGtGs-GY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~  119 (209)
T COG2518          45 RALPIGCGQTISAPHMVARM--LQLLELKPGDRVLEIGTGS-GYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGY  119 (209)
T ss_pred             CcccCCCCceecCcHHHHHH--HHHhCCCCCCeEEEECCCc-hHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCC
Confidence            33444445555556666653  5778999999999999976 999999999988  899999998854444    55888


Q ss_pred             CEE-EcCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEE
Q 018072          242 TDF-VNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       242 ~~v-v~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~  296 (361)
                      ..+ +...+...       .+.+. .||.|+-+.+-+..-+..+++|+++ |+++..
T Consensus       120 ~nV~v~~gDG~~-------G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~g-Grlv~P  168 (209)
T COG2518         120 ENVTVRHGDGSK-------GWPEEAPYDRIIVTAAAPEVPEALLDQLKPG-GRLVIP  168 (209)
T ss_pred             CceEEEECCccc-------CCCCCCCcCEEEEeeccCCCCHHHHHhcccC-CEEEEE
Confidence            543 33333321       22333 8999999999877778999999998 998765

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=98.10  E-value=1.5e-05  Score=74.43  Aligned_cols=108  Identities=24%  Similarity=0.264  Sum_probs=78.9

Q ss_pred             cceEECCCCCChhhhhccccchhhhhhhhhhhcCC----CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhH-
Q 018072          159 GCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKP----ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRF-  233 (361)
Q Consensus       159 ~~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~----~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~-  233 (361)
                      +..+++|+.+..+.++... +...+++++ +.+..    -++.+|+|+|+|.+|..+++.++..|..+|+++++++++. 
T Consensus       139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av-~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~  216 (311)
T cd05213         139 QKAIKVGKRVRTETGISRG-AVSISSAAV-ELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAE  216 (311)
T ss_pred             HHHHHHHHHHhhhcCCCCC-CcCHHHHHH-HHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHH
Confidence            4567778888888777765 667777774 33332    4789999999999999999999988877899999998875 


Q ss_pred             HHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHH
Q 018072          234 EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDN  278 (361)
Q Consensus       234 ~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~  278 (361)
                      ++++++|.. +++..    ++.+.+     ..+|+||.+++.+..
T Consensus       217 ~la~~~g~~-~~~~~----~~~~~l-----~~aDvVi~at~~~~~  251 (311)
T cd05213         217 ELAKELGGN-AVPLD----ELLELL-----NEADVVISATGAPHY  251 (311)
T ss_pred             HHHHHcCCe-EEeHH----HHHHHH-----hcCCEEEECCCCCch
Confidence            667778873 33221    122221     248999999998765

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>TIGR00518 alaDH alanine dehydrogenase

Probab=98.08  E-value=5.8e-05  Score=72.14  Aligned_cols=99  Identities=22%  Similarity=0.183  Sum_probs=69.9

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  273 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~  273 (361)
                      ++.+|+|+|+|.+|+.+++.++.+|+ +|+++++++++++.+.+ ++........+    . +.+.+.. ..+|++|+++
T Consensus       166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~----~-~~l~~~l-~~aDvVI~a~  238 (370)
T TIGR00518       166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSN----A-YEIEDAV-KRADLLIGAV  238 (370)
T ss_pred             CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCC----H-HHHHHHH-ccCCEEEEcc
Confidence            34569999999999999999999999 89999999988887754 55432222221    1 1222222 2589999997


Q ss_pred             C---C--hH-HHHHHHHHhcCCCcEEEEEcCCCC
Q 018072          274 G---N--ID-NMISAFECVHDGWGVAVLVGVPSK  301 (361)
Q Consensus       274 g---~--~~-~~~~~~~~l~~~~G~iv~~g~~~~  301 (361)
                      +   .  +. .-...++.++++ +.++.++...+
T Consensus       239 ~~~g~~~p~lit~~~l~~mk~g-~vIvDva~d~G  271 (370)
T TIGR00518       239 LIPGAKAPKLVSNSLVAQMKPG-AVIVDVAIDQG  271 (370)
T ss_pred             ccCCCCCCcCcCHHHHhcCCCC-CEEEEEecCCC
Confidence            3   2  22 136777889997 99999986553

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=98.03  E-value=4e-06  Score=84.86  Aligned_cols=81  Identities=25%  Similarity=0.333  Sum_probs=61.0

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC---------------------hhhHHHHHHcCCCEEEcCCC-
Q 018072          192 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS---------------------SKRFEEAKKFGVTDFVNTSE-  249 (361)
Q Consensus       192 ~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~---------------------~~~~~~~~~~G~~~vv~~~~-  249 (361)
                      ..++|++|+|+|+|++|+++++.++..|+ +|++++..                     +.+++.++++|++..++... 
T Consensus       133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~  211 (564)
T PRK12771        133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG  211 (564)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence            46789999999999999999999999999 78889853                     35677788899987776543 


Q ss_pred             CCccHHHHHHHHcCCCccEEEEccCChHH
Q 018072          250 HDRPIQEVIAEMTNGGVDRSVECTGNIDN  278 (361)
Q Consensus       250 ~~~~~~~~i~~~~~~g~Dvvid~~g~~~~  278 (361)
                      .+... +.+    ..++|+||+++|....
T Consensus       212 ~~~~~-~~~----~~~~D~Vi~AtG~~~~  235 (564)
T PRK12771        212 EDITL-EQL----EGEFDAVFVAIGAQLG  235 (564)
T ss_pred             CcCCH-HHH----HhhCCEEEEeeCCCCC
Confidence            22112 111    2369999999997543

>PRK08324 short chain dehydrogenase; Validated

Probab=97.87  E-value=9.5e-05  Score=76.58  Aligned_cols=139  Identities=22%  Similarity=0.269  Sum_probs=88.5

Q ss_pred             ccceeeEEEeccceEECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEE
Q 018072          148 STFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV  226 (361)
Q Consensus       148 G~~ae~v~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~  226 (361)
                      -++++|..++...++.+ +..+.+++.....          ......+|+++||+|+ |++|...++.+...|+ +|+++
T Consensus       385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~----------~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~  452 (681)
T PRK08324        385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQRM----------PKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLA  452 (681)
T ss_pred             hhcCCccCCChhhhcce-eeehhhhhhhhcC----------CCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEE
Confidence            35778888887777776 5555566532110          0122346899999997 9999999999999998 89999


Q ss_pred             cCChhhHHHHHH-cCC--C-E--EEcCCCCCccHHHHHHHHc--CCCccEEEEccCC-----------------------
Q 018072          227 DRSSKRFEEAKK-FGV--T-D--FVNTSEHDRPIQEVIAEMT--NGGVDRSVECTGN-----------------------  275 (361)
Q Consensus       227 ~~~~~~~~~~~~-~G~--~-~--vv~~~~~~~~~~~~i~~~~--~~g~Dvvid~~g~-----------------------  275 (361)
                      ++++++.+.+.+ ++.  . .  ..|..+.+ .+.+.+....  .+++|++|+++|.                       
T Consensus       453 ~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~-~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~  531 (681)
T PRK08324        453 DLDEEAAEAAAAELGGPDRALGVACDVTDEA-AVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNAT  531 (681)
T ss_pred             eCCHHHHHHHHHHHhccCcEEEEEecCCCHH-HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence            999887766543 443  1 1  22333221 2333333322  2379999999982                       


Q ss_pred             --hHHHHHHHHHhcC---CCcEEEEEcCCC
Q 018072          276 --IDNMISAFECVHD---GWGVAVLVGVPS  300 (361)
Q Consensus       276 --~~~~~~~~~~l~~---~~G~iv~~g~~~  300 (361)
                        ...++.+++.++.   + |++++++...
T Consensus       532 g~~~l~~~~~~~l~~~~~~-g~iV~vsS~~  560 (681)
T PRK08324        532 GHFLVAREAVRIMKAQGLG-GSIVFIASKN  560 (681)
T ss_pred             HHHHHHHHHHHHHHhcCCC-cEEEEECCcc
Confidence              1123455666665   5 8899988643

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=97.85  E-value=0.00018  Score=69.92  Aligned_cols=93  Identities=24%  Similarity=0.277  Sum_probs=74.5

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEc
Q 018072          193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  272 (361)
Q Consensus       193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~  272 (361)
                      .-.|.+|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|+..+      +  +.+.+     ...|+|+.+
T Consensus       251 ~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~~------~--leell-----~~ADIVI~a  316 (476)
T PTZ00075        251 MIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQVV------T--LEDVV-----ETADIFVTA  316 (476)
T ss_pred             CcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCceec------c--HHHHH-----hcCCEEEEC
Confidence            4579999999999999999999999999 89999998887766655665421      1  32222     258999999


Q ss_pred             cCChHHHH-HHHHHhcCCCcEEEEEcCCC
Q 018072          273 TGNIDNMI-SAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       273 ~g~~~~~~-~~~~~l~~~~G~iv~~g~~~  300 (361)
                      +|....+. ..++.|+++ +.++.+|...
T Consensus       317 tGt~~iI~~e~~~~MKpG-AiLINvGr~d  344 (476)
T PTZ00075        317 TGNKDIITLEHMRRMKNN-AIVGNIGHFD  344 (476)
T ss_pred             CCcccccCHHHHhccCCC-cEEEEcCCCc
Confidence            99877775 899999997 9999998764

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=97.76  E-value=3.9e-06  Score=67.44  Aligned_cols=91  Identities=16%  Similarity=0.292  Sum_probs=54.8

Q ss_pred             cCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC--ChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh-ccc
Q 018072          239 FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG--NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNE  315 (361)
Q Consensus       239 ~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g--~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~  315 (361)
                      ||+++++||...+  +      ...+++|+|||++|  .+..+..++++| ++ |+++.++.       ....... .+.
T Consensus         1 LGAd~vidy~~~~--~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~-G~~v~i~~-------~~~~~~~~~~~   63 (127)
T PF13602_consen    1 LGADEVIDYRDTD--F------AGPGGVDVVIDTVGQTGESLLDASRKLL-PG-GRVVSIGG-------DLPSFARRLKG   63 (127)
T ss_dssp             CT-SEEEETTCSH--H------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EE-EEEEEE-S-------HHHHHHHHHHC
T ss_pred             CCcCEEecCCCcc--c------cCCCCceEEEECCCCccHHHHHHHHHHC-CC-CEEEEECC-------cccchhhhhcc
Confidence            6999999998554  3      23459999999999  655557777888 87 99999984       1111111 123


Q ss_pred             cEEEEeeecC-CC---cCCcHHHHHHHHHcCCccc
Q 018072          316 RTLKGTFFGN-YK---PRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       316 ~~l~g~~~~~-~~---~~~~~~~~~~~~~~~~l~~  346 (361)
                      ..+.+.++.+ ..   ..+.++++++++++|+|.+
T Consensus        64 ~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l~~   98 (127)
T PF13602_consen   64 RSIRYSFLFSVDPNAIRAEALEELAELVAEGKLKP   98 (127)
T ss_dssp             HHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS--
T ss_pred             cceEEEEEEecCCCchHHHHHHHHHHHHHCCCeEE
Confidence            3333333322 11   2345999999999999965

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=97.74  E-value=0.00011  Score=68.02  Aligned_cols=99  Identities=21%  Similarity=0.273  Sum_probs=66.1

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc----CCCEEEcCCCCCccHHHHHHHHcCCCccE
Q 018072          193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNGGVDR  268 (361)
Q Consensus       193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~----G~~~vv~~~~~~~~~~~~i~~~~~~g~Dv  268 (361)
                      .+++++||-+|+|. |.+++.+++ .|+.+|+++|.++..++.+++.    +....+.....+      ......++||+
T Consensus       157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~~------~~~~~~~~fDl  228 (288)
T TIGR00406       157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLIY------LEQPIEGKADV  228 (288)
T ss_pred             cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEecc------cccccCCCceE
Confidence            46789999999988 887776665 5766999999999888777652    222111111110      11122347999


Q ss_pred             EEEccCCh---HHHHHHHHHhcCCCcEEEEEcCCC
Q 018072          269 SVECTGNI---DNMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       269 vid~~g~~---~~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      |+......   ..+..+.+.|+++ |.+++.|...
T Consensus       229 Vvan~~~~~l~~ll~~~~~~Lkpg-G~li~sgi~~  262 (288)
T TIGR00406       229 IVANILAEVIKELYPQFSRLVKPG-GWLILSGILE  262 (288)
T ss_pred             EEEecCHHHHHHHHHHHHHHcCCC-cEEEEEeCcH
Confidence            99865442   3456778899997 9999887643

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.64  E-value=0.00068  Score=62.52  Aligned_cols=99  Identities=20%  Similarity=0.307  Sum_probs=72.2

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      .|++++|+|.|.+|...+..++..|+ +|+++++++++.+.+.++|...+ .       +. .+.+.. .++|+||++++
T Consensus       150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~~-~-------~~-~l~~~l-~~aDiVint~P  218 (287)
T TIGR02853       150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIPF-P-------LN-KLEEKV-AEIDIVINTIP  218 (287)
T ss_pred             CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeee-c-------HH-HHHHHh-ccCCEEEECCC
Confidence            47899999999999999999999998 99999999988877777775422 1       11 122222 26899999997


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEcCCCCCcee
Q 018072          275 NIDNMISAFECVHDGWGVAVLVGVPSKDAVF  305 (361)
Q Consensus       275 ~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~  305 (361)
                      ..-.-...++.++++ ..++.++..++...+
T Consensus       219 ~~ii~~~~l~~~k~~-aliIDlas~Pg~tdf  248 (287)
T TIGR02853       219 ALVLTADVLSKLPKH-AVIIDLASKPGGTDF  248 (287)
T ss_pred             hHHhCHHHHhcCCCC-eEEEEeCcCCCCCCH
Confidence            532224566778886 888888876544443

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=97.57  E-value=0.00039  Score=61.36  Aligned_cols=79  Identities=20%  Similarity=0.366  Sum_probs=60.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCC----CEEEcCCCCCccHHHHHHHHcCC--Cc
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGV----TDFVNTSEHDRPIQEVIAEMTNG--GV  266 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~----~~vv~~~~~~~~~~~~i~~~~~~--g~  266 (361)
                      .++.++|+|+ +++|.+.++.....|+ +|+.+.|.+++++.+. +++.    ...+|..+.+ ++.+.+..+...  .+
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~-~~~~~i~~~~~~~g~i   82 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTDRA-AVEAAIEALPEEFGRI   82 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCCHH-HHHHHHHHHHHhhCcc
Confidence            3478899998 8999999999999999 9999999999988875 4773    2234443332 355666666655  69


Q ss_pred             cEEEEccCC
Q 018072          267 DRSVECTGN  275 (361)
Q Consensus       267 Dvvid~~g~  275 (361)
                      |+.+++.|-
T Consensus        83 DiLvNNAGl   91 (246)
T COG4221          83 DILVNNAGL   91 (246)
T ss_pred             cEEEecCCC
Confidence            999999884

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.54  E-value=0.00022  Score=69.55  Aligned_cols=161  Identities=20%  Similarity=0.214  Sum_probs=97.4

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccC
Q 018072           67 IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLG  146 (361)
Q Consensus        67 ~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~  146 (361)
                      .-|||+++.+.++++++.+.-+|+     +.+ |+.|.    +.+..|......   |..         .          
T Consensus        91 ~~g~ea~~hl~~V~~GldS~V~GE-----~qI-lgQvk----~a~~~a~~~g~~---g~~---------l----------  138 (423)
T PRK00045         91 HEGEEAVRHLFRVASGLDSMVLGE-----PQI-LGQVK----DAYALAQEAGTV---GTI---------L----------  138 (423)
T ss_pred             cCCHHHHHHHHHHHhhhhhhhcCC-----hHH-HHHHH----HHHHHHHHcCCc---hHH---------H----------
Confidence            469999999999999987744444     433 44443    223333332222   111         1          


Q ss_pred             cccceeeEEEeccceEECCCCCChhhhhccccchhhhhhhhhhhc---CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeE
Q 018072          147 TSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA---KPERGSSVAVFGLGAVGLAAAEGARIAGASRI  223 (361)
Q Consensus       147 ~G~~ae~v~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~---~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~V  223 (361)
                      .+.|++.+.++        ..+..+.+. ...+..++++++....   +-.++.+|+|+|+|.+|.++++.++..|+.+|
T Consensus       139 ~~lf~~a~~~~--------k~v~~~t~i-~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V  209 (423)
T PRK00045        139 NRLFQKAFSVA--------KRVRTETGI-GAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKI  209 (423)
T ss_pred             HHHHHHHHHHH--------hhHhhhcCC-CCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeE
Confidence            12565544443        222222221 1224556666642221   12678999999999999999999999998789


Q ss_pred             EEEcCChhhHH-HHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHH
Q 018072          224 IGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDN  278 (361)
Q Consensus       224 i~~~~~~~~~~-~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~  278 (361)
                      ++++++.++.+ +++++|.+ +++.       . .+.... .++|+||++++.+..
T Consensus       210 ~v~~r~~~ra~~la~~~g~~-~~~~-------~-~~~~~l-~~aDvVI~aT~s~~~  255 (423)
T PRK00045        210 TVANRTLERAEELAEEFGGE-AIPL-------D-ELPEAL-AEADIVISSTGAPHP  255 (423)
T ss_pred             EEEeCCHHHHHHHHHHcCCc-EeeH-------H-HHHHHh-ccCCEEEECCCCCCc
Confidence            99999988865 66777753 2221       1 111111 268999999997654

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=97.51  E-value=0.0012  Score=57.56  Aligned_cols=102  Identities=23%  Similarity=0.425  Sum_probs=71.2

Q ss_pred             hhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHH----HcCC-CEEEcCCCCCccHHHHHHHHc
Q 018072          189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAK----KFGV-TDFVNTSEHDRPIQEVIAEMT  262 (361)
Q Consensus       189 ~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~----~~G~-~~vv~~~~~~~~~~~~i~~~~  262 (361)
                      ...++.++++|+-+|+|. |.+++++|+..+. .+|+++|.+++.++.++    .+|. +.+.... .+  ..+.+... 
T Consensus        34 ~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~-~d--~~~~l~~~-  108 (198)
T PRK00377         34 SKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK-GE--APEILFTI-  108 (198)
T ss_pred             HHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE-ec--hhhhHhhc-
Confidence            456789999999999988 9999999887653 48999999999888764    3562 3322211 11  22222222 


Q ss_pred             CCCccEEEEccCC---hHHHHHHHHHhcCCCcEEEEE
Q 018072          263 NGGVDRSVECTGN---IDNMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       263 ~~g~Dvvid~~g~---~~~~~~~~~~l~~~~G~iv~~  296 (361)
                      .+.+|.||...+.   ...++.+.+.|+++ |+++..
T Consensus       109 ~~~~D~V~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~  144 (198)
T PRK00377        109 NEKFDRIFIGGGSEKLKEIISASWEIIKKG-GRIVID  144 (198)
T ss_pred             CCCCCEEEECCCcccHHHHHHHHHHHcCCC-cEEEEE
Confidence            2479999986543   34677888899997 998753

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.49  E-value=0.00043  Score=56.39  Aligned_cols=74  Identities=26%  Similarity=0.361  Sum_probs=54.1

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCC--EEEcCCCCCccHHHHHHHHcCCCccEEE
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVT--DFVNTSEHDRPIQEVIAEMTNGGVDRSV  270 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~~--~vv~~~~~~~~~~~~i~~~~~~g~Dvvi  270 (361)
                      -.+.+++|+|+|++|.+++..+...|+++|+.+.|+.+|.+.+. .++..  ..+.+.+    +.+.+     ..+|+||
T Consensus        10 l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~----~~~~~-----~~~DivI   80 (135)
T PF01488_consen   10 LKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED----LEEAL-----QEADIVI   80 (135)
T ss_dssp             GTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG----HCHHH-----HTESEEE
T ss_pred             cCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH----HHHHH-----hhCCeEE
Confidence            35789999999999999999999999988999999998877764 45332  2333322    21111     2589999


Q ss_pred             EccCCh
Q 018072          271 ECTGNI  276 (361)
Q Consensus       271 d~~g~~  276 (361)
                      ++++.+
T Consensus        81 ~aT~~~   86 (135)
T PF01488_consen   81 NATPSG   86 (135)
T ss_dssp             E-SSTT
T ss_pred             EecCCC
Confidence            998874

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=97.49  E-value=0.00079  Score=64.71  Aligned_cols=109  Identities=22%  Similarity=0.234  Sum_probs=76.1

Q ss_pred             chhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHH
Q 018072          179 GVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVI  258 (361)
Q Consensus       179 ~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i  258 (361)
                      +....+..+.+..++++|++||-+|+| .|.++..+++..|. +|++++.+++.++.+++......+.....+  +.   
T Consensus       151 Aq~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~~D--~~---  223 (383)
T PRK11705        151 AQEAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRLQD--YR---  223 (383)
T ss_pred             HHHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEECc--hh---
Confidence            444555556677889999999999986 47788888888888 999999999999998774322112111112  21   


Q ss_pred             HHHcCCCccEEEEc-----cCC---hHHHHHHHHHhcCCCcEEEEEc
Q 018072          259 AEMTNGGVDRSVEC-----TGN---IDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       259 ~~~~~~g~Dvvid~-----~g~---~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                       .+ ++.||.|+..     +|.   +..+..+.+.|+++ |++++..
T Consensus       224 -~l-~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpG-G~lvl~~  267 (383)
T PRK11705        224 -DL-NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPD-GLFLLHT  267 (383)
T ss_pred             -hc-CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence             11 3479998743     343   34678888999998 9988764

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.39  E-value=0.0013  Score=61.50  Aligned_cols=102  Identities=23%  Similarity=0.263  Sum_probs=73.4

Q ss_pred             hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHc
Q 018072          188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT  262 (361)
Q Consensus       188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~  262 (361)
                      .+...++++++||.+|+| .|..++.+++..+. ..|++++.+++..+.+++    +|.+.+... ..+  ..+....  
T Consensus        73 l~~L~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i-~gD--~~~~~~~--  146 (322)
T PRK13943         73 MEWVGLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFV-CGD--GYYGVPE--  146 (322)
T ss_pred             HHhcCCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEE-eCC--hhhcccc--
Confidence            355678899999999998 49999999998764 379999999987766543    676543322 222  2111111  


Q ss_pred             CCCccEEEEccCChHHHHHHHHHhcCCCcEEEEE
Q 018072          263 NGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       263 ~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~  296 (361)
                      .+.+|+|+.+.+.+......++.|+++ |+++..
T Consensus       147 ~~~fD~Ii~~~g~~~ip~~~~~~Lkpg-G~Lvv~  179 (322)
T PRK13943        147 FAPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP  179 (322)
T ss_pred             cCCccEEEECCchHHhHHHHHHhcCCC-CEEEEE
Confidence            136999999988767777889999998 997763

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=97.37  E-value=0.00024  Score=62.29  Aligned_cols=101  Identities=23%  Similarity=0.334  Sum_probs=69.2

Q ss_pred             hhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCC-eEEEEcCChhhHHHHH----HcCCCEE-EcCCCCCccHHHHHHH
Q 018072          187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAK----KFGVTDF-VNTSEHDRPIQEVIAE  260 (361)
Q Consensus       187 ~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~-~Vi~~~~~~~~~~~~~----~~G~~~v-v~~~~~~~~~~~~i~~  260 (361)
                      +.+...+++|++||-+|+|. |+.++.+++..|.. .|+.++++++-.+.++    ++|.+.+ +...+...       .
T Consensus        64 ~l~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~-------g  135 (209)
T PF01135_consen   64 MLEALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSE-------G  135 (209)
T ss_dssp             HHHHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGG-------T
T ss_pred             HHHHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhh-------c
Confidence            35677899999999999876 88999999888753 6999999987665554    3566532 22222111       1


Q ss_pred             HcC-CCccEEEEccCChHHHHHHHHHhcCCCcEEEEE
Q 018072          261 MTN-GGVDRSVECTGNIDNMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       261 ~~~-~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~  296 (361)
                      +.. +.||.|+-+.+-+..-...+++|+++ |+++..
T Consensus       136 ~~~~apfD~I~v~~a~~~ip~~l~~qL~~g-GrLV~p  171 (209)
T PF01135_consen  136 WPEEAPFDRIIVTAAVPEIPEALLEQLKPG-GRLVAP  171 (209)
T ss_dssp             TGGG-SEEEEEESSBBSS--HHHHHTEEEE-EEEEEE
T ss_pred             cccCCCcCEEEEeeccchHHHHHHHhcCCC-cEEEEE
Confidence            112 37999999998877778999999997 998874

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>PRK06182 short chain dehydrogenase; Validated

Probab=97.34  E-value=0.0028  Score=57.85  Aligned_cols=79  Identities=20%  Similarity=0.389  Sum_probs=55.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEE-EcCCCCCccHHHHHHHHc--CCCccEEE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMT--NGGVDRSV  270 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~v-v~~~~~~~~~~~~i~~~~--~~g~Dvvi  270 (361)
                      ++.+++|+|+ |++|...++.+...|. +|+++++++++++.+.+.+...+ .|..+.+ .+.+.+....  .+++|++|
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~-~~~~~~~~~~~~~~~id~li   79 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTDEA-SIKAAVDTIIAEEGRIDVLV   79 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCCHH-HHHHHHHHHHHhcCCCCEEE
Confidence            3578999998 9999999998888898 89999999988876665554432 3333322 2434444332  23799999


Q ss_pred             EccCC
Q 018072          271 ECTGN  275 (361)
Q Consensus       271 d~~g~  275 (361)
                      +++|.
T Consensus        80 ~~ag~   84 (273)
T PRK06182         80 NNAGY   84 (273)
T ss_pred             ECCCc
Confidence            99874

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.32  E-value=0.0035  Score=55.74  Aligned_cols=104  Identities=23%  Similarity=0.346  Sum_probs=67.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-Hc---CCCEEEcCCCCC-ccHHHHHHHHcC--CCc
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF---GVTDFVNTSEHD-RPIQEVIAEMTN--GGV  266 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~---G~~~vv~~~~~~-~~~~~~i~~~~~--~g~  266 (361)
                      ++++|+|+|+ |++|..+++.+...|+ +|+.+++++++.+.+. ++   +.-+.+..+-.+ ..+.+.+.....  +++
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   82 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI   82 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4679999998 9999999999999999 8999999988776652 22   222223222221 123333322221  368


Q ss_pred             cEEEEccCChH-----------------------HHHHHHHHhcCCCcEEEEEcCCC
Q 018072          267 DRSVECTGNID-----------------------NMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       267 Dvvid~~g~~~-----------------------~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      |.++++++...                       .++..++.++++ |++++++...
T Consensus        83 d~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~~  138 (238)
T PRK05786         83 DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEG-SSIVLVSSMS  138 (238)
T ss_pred             CEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcC-CEEEEEecch
Confidence            99999887421                       134555667776 8999888653

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=97.25  E-value=0.0036  Score=53.10  Aligned_cols=104  Identities=22%  Similarity=0.361  Sum_probs=72.6

Q ss_pred             hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCEEEcCCCCCccHHHHHHHHcC
Q 018072          188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAEMTN  263 (361)
Q Consensus       188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~vv~~~~~~~~~~~~i~~~~~  263 (361)
                      +...++++|+.++=+|+|. |..++++|+.....+|+++++++++++..+    +||.+.+......   -.+.+..+. 
T Consensus        27 ls~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~---Ap~~L~~~~-  101 (187)
T COG2242          27 LSKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGD---APEALPDLP-  101 (187)
T ss_pred             HHhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEecc---chHhhcCCC-
Confidence            3457889999888889865 667778885555569999999999988864    4887754433322   122322221 


Q ss_pred             CCccEEEEccCC--hHHHHHHHHHhcCCCcEEEEEcC
Q 018072          264 GGVDRSVECTGN--IDNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       264 ~g~Dvvid~~g~--~~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                       .+|.+|---|.  +..++.++..|+++ |++|.--.
T Consensus       102 -~~daiFIGGg~~i~~ile~~~~~l~~g-grlV~nai  136 (187)
T COG2242         102 -SPDAIFIGGGGNIEEILEAAWERLKPG-GRLVANAI  136 (187)
T ss_pred             -CCCEEEECCCCCHHHHHHHHHHHcCcC-CeEEEEee
Confidence             58999975442  34688999999997 99887644

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.22  E-value=0.003  Score=54.49  Aligned_cols=111  Identities=17%  Similarity=0.211  Sum_probs=75.7

Q ss_pred             CCCEEEEEcC--CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCCE-EEcCCCCC--ccHHHHHHHHcCCCccE
Q 018072          195 RGSSVAVFGL--GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD-FVNTSEHD--RPIQEVIAEMTNGGVDR  268 (361)
Q Consensus       195 ~g~~VlI~G~--g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~~~-vv~~~~~~--~~~~~~i~~~~~~g~Dv  268 (361)
                      ....|||+|+  |++|.+.+.-....|. .|+++.+.-++...+. ++|... -+|..+++  .++...++..++|+.|+
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~   84 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL   84 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence            4568999975  9999998888888899 9999999888877766 777642 34433322  23455566667779999


Q ss_pred             EEEccCChH----------HHH----------------HHHHHhcCCCcEEEEEcCCCCCceeec
Q 018072          269 SVECTGNID----------NMI----------------SAFECVHDGWGVAVLVGVPSKDAVFMT  307 (361)
Q Consensus       269 vid~~g~~~----------~~~----------------~~~~~l~~~~G~iv~~g~~~~~~~~~~  307 (361)
                      .++.+|.+=          .++                ..-.+++.. |+|+.+|.......+++
T Consensus        85 L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaK-GtIVnvgSl~~~vpfpf  148 (289)
T KOG1209|consen   85 LYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAK-GTIVNVGSLAGVVPFPF  148 (289)
T ss_pred             EEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHcc-ceEEEecceeEEeccch
Confidence            999887421          111                112245666 99999987665444443

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=97.21  E-value=0.0022  Score=53.38  Aligned_cols=94  Identities=28%  Similarity=0.309  Sum_probs=64.3

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEE
Q 018072          192 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  271 (361)
Q Consensus       192 ~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid  271 (361)
                      -.-.|.+++|+|=|.+|.-.++.++.+|+ +|++++.++-+.-++.--|.... .       ..+.+     ...|++|.
T Consensus        19 ~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~v~-~-------~~~a~-----~~adi~vt   84 (162)
T PF00670_consen   19 LMLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFEVM-T-------LEEAL-----RDADIFVT   84 (162)
T ss_dssp             S--TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-EEE---------HHHHT-----TT-SEEEE
T ss_pred             eeeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcEec-C-------HHHHH-----hhCCEEEE
Confidence            35678999999999999999999999999 99999999988877777776432 1       22222     25799999


Q ss_pred             ccCChHHH-HHHHHHhcCCCcEEEEEcCCC
Q 018072          272 CTGNIDNM-ISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       272 ~~g~~~~~-~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      ++|..+.+ ..-++.|+++ ..+..+|...
T Consensus        85 aTG~~~vi~~e~~~~mkdg-ail~n~Gh~d  113 (162)
T PF00670_consen   85 ATGNKDVITGEHFRQMKDG-AILANAGHFD  113 (162)
T ss_dssp             -SSSSSSB-HHHHHHS-TT-EEEEESSSST
T ss_pred             CCCCccccCHHHHHHhcCC-eEEeccCcCc
Confidence            99986654 4778889986 6666666544

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK05993 short chain dehydrogenase; Provisional

Probab=97.16  E-value=0.003  Score=57.81  Aligned_cols=78  Identities=18%  Similarity=0.323  Sum_probs=55.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEE-EcCCCCCccHHHHHHHH---cCCCccEE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEM---TNGGVDRS  269 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~v-v~~~~~~~~~~~~i~~~---~~~g~Dvv  269 (361)
                      .+.+++|+|+ |++|...++.+...|. +|+++++++++++.+.+.+.+.+ .|..+.+ ++.+.+...   ..+.+|++
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~-~~~~~~~~~~~~~~g~id~l   80 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAEPE-SIAALVAQVLELSGGRLDAL   80 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCCHH-HHHHHHHHHHHHcCCCccEE
Confidence            4678999998 9999999998888898 89999999998887777665433 2333321 233333332   23478999


Q ss_pred             EEccC
Q 018072          270 VECTG  274 (361)
Q Consensus       270 id~~g  274 (361)
                      +++.|
T Consensus        81 i~~Ag   85 (277)
T PRK05993         81 FNNGA   85 (277)
T ss_pred             EECCC
Confidence            99876

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.12  E-value=0.0049  Score=54.26  Aligned_cols=101  Identities=26%  Similarity=0.336  Sum_probs=70.1

Q ss_pred             hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHH----cCCCEE-EcCCCCCccHHHHHHHH
Q 018072          188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDF-VNTSEHDRPIQEVIAEM  261 (361)
Q Consensus       188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~----~G~~~v-v~~~~~~~~~~~~i~~~  261 (361)
                      .+..++++|++||-+|+|. |..++.+++..+. .+|++++.+++-.+.+++    +|...+ +...+....+      .
T Consensus        69 ~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~~~------~  141 (212)
T PRK13942         69 CELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTLGY------E  141 (212)
T ss_pred             HHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCC------C
Confidence            4567789999999999876 7777788877653 389999999988777654    454321 1111111001      1


Q ss_pred             cCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEE
Q 018072          262 TNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       262 ~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~  296 (361)
                      ..+.||+|+-....+...+...+.|+++ |+++..
T Consensus       142 ~~~~fD~I~~~~~~~~~~~~l~~~Lkpg-G~lvi~  175 (212)
T PRK13942        142 ENAPYDRIYVTAAGPDIPKPLIEQLKDG-GIMVIP  175 (212)
T ss_pred             cCCCcCEEEECCCcccchHHHHHhhCCC-cEEEEE
Confidence            1237999987766667778889999998 998775

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=97.12  E-value=0.003  Score=54.24  Aligned_cols=79  Identities=20%  Similarity=0.328  Sum_probs=56.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC---EEEcCCCCCccHHHHHHHHcCC--CccE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT---DFVNTSEHDRPIQEVIAEMTNG--GVDR  268 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~---~vv~~~~~~~~~~~~i~~~~~~--g~Dv  268 (361)
                      .|.+|||+|+ +++|+..++-...+|- +||.+.|++++++.+++...+   .+.|..+.+ ...+.+.++-..  ..++
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~-~~~~lvewLkk~~P~lNv   81 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVADRD-SRRELVEWLKKEYPNLNV   81 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccchh-hHHHHHHHHHhhCCchhe
Confidence            4789999976 8999999888888886 999999999999999875443   344444332 122333333333  6799


Q ss_pred             EEEccCC
Q 018072          269 SVECTGN  275 (361)
Q Consensus       269 vid~~g~  275 (361)
                      +++++|-
T Consensus        82 liNNAGI   88 (245)
T COG3967          82 LINNAGI   88 (245)
T ss_pred             eeecccc
Confidence            9998873

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=97.11  E-value=0.0054  Score=52.24  Aligned_cols=94  Identities=22%  Similarity=0.328  Sum_probs=63.8

Q ss_pred             EEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCC--
Q 018072          199 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN--  275 (361)
Q Consensus       199 VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~--  275 (361)
                      |+|+|+ |.+|...++.+...|. +|+++.+++++.+.  ..+++ ++..+-.+  . +.+..... ++|+||.++|.  
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~-~~~~d~~d--~-~~~~~al~-~~d~vi~~~~~~~   72 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVE-IIQGDLFD--P-DSVKAALK-GADAVIHAAGPPP   72 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEE-EEESCTTC--H-HHHHHHHT-TSSEEEECCHSTT
T ss_pred             eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccc-cceeeehh--h-hhhhhhhh-hcchhhhhhhhhc
Confidence            789998 9999999999999997 99999999998877  34443 33333333  2 23333222 69999999984  


Q ss_pred             --hHHHHHHHHHhcCCC-cEEEEEcCCC
Q 018072          276 --IDNMISAFECVHDGW-GVAVLVGVPS  300 (361)
Q Consensus       276 --~~~~~~~~~~l~~~~-G~iv~~g~~~  300 (361)
                        .......++.++..+ .+++.++...
T Consensus        73 ~~~~~~~~~~~a~~~~~~~~~v~~s~~~  100 (183)
T PF13460_consen   73 KDVDAAKNIIEAAKKAGVKRVVYLSSAG  100 (183)
T ss_dssp             THHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred             ccccccccccccccccccccceeeeccc
Confidence              233555566655441 3777776444

...

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.10  E-value=0.0047  Score=54.03  Aligned_cols=103  Identities=18%  Similarity=0.201  Sum_probs=68.5

Q ss_pred             hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHc
Q 018072          188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT  262 (361)
Q Consensus       188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g-~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~  262 (361)
                      .+...++++++||=+|+|. |..++.+++..+ ..+|++++.+++-.+.+++    ++....+.....+  ..+.+  ..
T Consensus        65 ~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d--~~~~~--~~  139 (205)
T PRK13944         65 CELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGD--GKRGL--EK  139 (205)
T ss_pred             HHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECC--cccCC--cc
Confidence            4566788999999999876 777777787764 2389999999987766653    4543111111111  11111  01


Q ss_pred             CCCccEEEEccCChHHHHHHHHHhcCCCcEEEEE
Q 018072          263 NGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       263 ~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~  296 (361)
                      .+.||+|+-+.......+...+.|+++ |+++..
T Consensus       140 ~~~fD~Ii~~~~~~~~~~~l~~~L~~g-G~lvi~  172 (205)
T PRK13944        140 HAPFDAIIVTAAASTIPSALVRQLKDG-GVLVIP  172 (205)
T ss_pred             CCCccEEEEccCcchhhHHHHHhcCcC-cEEEEE
Confidence            237999998776656667888999998 998764

>TIGR00438 rrmJ cell division protein FtsJ

Probab=97.08  E-value=0.01  Score=51.09  Aligned_cols=102  Identities=21%  Similarity=0.203  Sum_probs=62.5

Q ss_pred             hcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCC-CccE
Q 018072          190 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDR  268 (361)
Q Consensus       190 ~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~-g~Dv  268 (361)
                      ...+++|++||.+|+|+-+.......+..+..+|+++|.++.+    ...++. ++..+..+....+.+....+. ++|+
T Consensus        27 ~~~i~~g~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~-~~~~d~~~~~~~~~l~~~~~~~~~D~  101 (188)
T TIGR00438        27 FKLIKPGDTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMK----PIENVD-FIRGDFTDEEVLNKIRERVGDDKVDV  101 (188)
T ss_pred             hcccCCCCEEEEecCCCCHHHHHHHHHhCCCceEEEEeccccc----cCCCce-EEEeeCCChhHHHHHHHHhCCCCccE
Confidence            3457899999999998755443333333344489999999864    112333 221111111233444444444 8999


Q ss_pred             EEEcc-----CC------------hHHHHHHHHHhcCCCcEEEEEc
Q 018072          269 SVECT-----GN------------IDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       269 vid~~-----g~------------~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      |+...     |.            ...+..+.+.|+++ |+++...
T Consensus       102 V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lvi~~  146 (188)
T TIGR00438       102 VMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPK-GNFVVKV  146 (188)
T ss_pred             EEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCC-CEEEEEE
Confidence            99632     21            35677889999997 9998864

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=97.04  E-value=0.0018  Score=50.42  Aligned_cols=95  Identities=25%  Similarity=0.299  Sum_probs=62.5

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHH-cCCCeEEEEcCChhhHHHHHHc----CCCEEEcCCCCCccHHHHHHHHcCCCccEE
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARI-AGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNGGVDRS  269 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~-~g~~~Vi~~~~~~~~~~~~~~~----G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvv  269 (361)
                      ||.+||-+|+|. |.+++.+++. .++ +|+++|.+++.++.+++.    +...-+.....+  + .. .....++||+|
T Consensus         1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d--~-~~-~~~~~~~~D~v   74 (112)
T PF12847_consen    1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQGD--A-EF-DPDFLEPFDLV   74 (112)
T ss_dssp             TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESC--C-HG-GTTTSSCEEEE
T ss_pred             CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECc--c-cc-CcccCCCCCEE
Confidence            688999999976 7888888885 566 999999999988888652    222111111122  1 00 01112279999


Q ss_pred             EEcc-CC---h------HHHHHHHHHhcCCCcEEEEE
Q 018072          270 VECT-GN---I------DNMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       270 id~~-g~---~------~~~~~~~~~l~~~~G~iv~~  296 (361)
                      +... ..   .      ..++...+.|+++ |+++.-
T Consensus        75 ~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~lvi~  110 (112)
T PF12847_consen   75 ICSGFTLHFLLPLDERRRVLERIRRLLKPG-GRLVIN  110 (112)
T ss_dssp             EECSGSGGGCCHHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             EECCCccccccchhHHHHHHHHHHHhcCCC-cEEEEE
Confidence            9877 21   1      2377888999997 998753

...

>PRK05693 short chain dehydrogenase; Provisional

Probab=97.04  E-value=0.0038  Score=56.98  Aligned_cols=77  Identities=21%  Similarity=0.374  Sum_probs=55.3

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEE-EcCCCCCccHHHHHHHHcC--CCccEEEEc
Q 018072          197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTN--GGVDRSVEC  272 (361)
Q Consensus       197 ~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~v-v~~~~~~~~~~~~i~~~~~--~g~Dvvid~  272 (361)
                      .++||+|+ |++|...++.+...|+ +|+++++++++.+.+.+.+...+ .|..+.+ .+.+.+.....  +++|++|++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~id~vi~~   79 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVNDGA-ALARLAEELEAEHGGLDVLINN   79 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCCHH-HHHHHHHHHHHhcCCCCEEEEC
Confidence            47899998 9999999998888898 89999999888877766665433 3443322 24444444322  379999999


Q ss_pred             cCC
Q 018072          273 TGN  275 (361)
Q Consensus       273 ~g~  275 (361)
                      +|.
T Consensus        80 ag~   82 (274)
T PRK05693         80 AGY   82 (274)
T ss_pred             CCC
Confidence            983

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=97.03  E-value=0.025  Score=49.41  Aligned_cols=120  Identities=18%  Similarity=0.137  Sum_probs=73.2

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChh-hHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK-RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  273 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~-~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~  273 (361)
                      .|.+|||+|+|.+|..-++.+...|+ +|++++.+.. .++.+.+.|--..+. ....   ...   +  .++|+||-++
T Consensus         8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~~-~~~~---~~d---l--~~~~lVi~at   77 (205)
T TIGR01470         8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWLA-RCFD---ADI---L--EGAFLVIAAT   77 (205)
T ss_pred             CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEEe-CCCC---HHH---h--CCcEEEEECC
Confidence            36799999999999999999999999 8888866542 333333334212221 1111   011   1  3689999999


Q ss_pred             CChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecC
Q 018072          274 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN  325 (361)
Q Consensus       274 g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~  325 (361)
                      +.++.-.......+.. |.++.+-......++.++...-..++++--+..|.
T Consensus        78 ~d~~ln~~i~~~a~~~-~ilvn~~d~~e~~~f~~pa~~~~g~l~iaisT~G~  128 (205)
T TIGR01470        78 DDEELNRRVAHAARAR-GVPVNVVDDPELCSFIFPSIVDRSPVVVAISSGGA  128 (205)
T ss_pred             CCHHHHHHHHHHHHHc-CCEEEECCCcccCeEEEeeEEEcCCEEEEEECCCC
Confidence            9965655666666666 77776654333445555433222556665454443

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=97.02  E-value=0.0059  Score=52.59  Aligned_cols=98  Identities=17%  Similarity=0.169  Sum_probs=64.7

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcCCCcc
Q 018072          192 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGGVD  267 (361)
Q Consensus       192 ~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~~g~D  267 (361)
                      .++++.+||-+|+|. |..++.+++.....+|+++|.+++.++.+++    .+.+. +.....+  ..+ +. . .+.||
T Consensus        42 ~l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~-i~~~~~d--~~~-~~-~-~~~fD  114 (187)
T PRK00107         42 YLPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKN-VTVVHGR--AEE-FG-Q-EEKFD  114 (187)
T ss_pred             hcCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCC-EEEEecc--Hhh-CC-C-CCCcc
Confidence            345689999999865 6666666665544499999999987776643    55543 2222222  211 11 1 33799


Q ss_pred             EEEEccCC--hHHHHHHHHHhcCCCcEEEEEc
Q 018072          268 RSVECTGN--IDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       268 vvid~~g~--~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      +|+-....  +..++.+.+.|+++ |+++.+-
T Consensus       115 lV~~~~~~~~~~~l~~~~~~LkpG-G~lv~~~  145 (187)
T PRK00107        115 VVTSRAVASLSDLVELCLPLLKPG-GRFLALK  145 (187)
T ss_pred             EEEEccccCHHHHHHHHHHhcCCC-eEEEEEe
Confidence            99975332  35677889999998 9998773

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=97.00  E-value=0.0096  Score=59.60  Aligned_cols=48  Identities=23%  Similarity=0.171  Sum_probs=40.7

Q ss_pred             hhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 018072          188 LNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA  236 (361)
Q Consensus       188 ~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~  236 (361)
                      -...+.+.|.+|||+|+ |.+|...++.+...|. +|+++.++.++.+.+
T Consensus        72 ~~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l  120 (576)
T PLN03209         72 PKELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESL  120 (576)
T ss_pred             ccccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHH
Confidence            34566789999999998 9999999998888898 899999998877544

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=96.98  E-value=0.01  Score=46.83  Aligned_cols=103  Identities=20%  Similarity=0.332  Sum_probs=68.6

Q ss_pred             hhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcCC
Q 018072          189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNG  264 (361)
Q Consensus       189 ~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~~  264 (361)
                      ....+.++++|+-+|+|. |..+..+++..+..+|+++|.++...+.+++    ++...+.... .+  ....... ..+
T Consensus        13 ~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-~~--~~~~~~~-~~~   87 (124)
T TIGR02469        13 SKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVE-GD--APEALED-SLP   87 (124)
T ss_pred             HHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEe-cc--ccccChh-hcC
Confidence            445667788999999977 8889999988754589999999988877643    4443221111 11  1000111 123


Q ss_pred             CccEEEEccCC---hHHHHHHHHHhcCCCcEEEEEc
Q 018072          265 GVDRSVECTGN---IDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       265 g~Dvvid~~g~---~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      .+|+|+.....   .+.+..+.+.|+++ |++++..
T Consensus        88 ~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~li~~~  122 (124)
T TIGR02469        88 EPDRVFIGGSGGLLQEILEAIWRRLRPG-GRIVLNA  122 (124)
T ss_pred             CCCEEEECCcchhHHHHHHHHHHHcCCC-CEEEEEe
Confidence            79999976533   23678899999998 9988653

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.93  E-value=0.012  Score=57.94  Aligned_cols=79  Identities=24%  Similarity=0.357  Sum_probs=51.1

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCh--hhHH-HHHHcCCCE-EEcCCCCCccHHHHHHHHcC--CCc
Q 018072          194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS--KRFE-EAKKFGVTD-FVNTSEHDRPIQEVIAEMTN--GGV  266 (361)
Q Consensus       194 ~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~--~~~~-~~~~~G~~~-vv~~~~~~~~~~~~i~~~~~--~g~  266 (361)
                      .++.++||+|+ |++|...++.+...|+ +|+++++.+  ++++ ...+++... ..|..+.+ .+.+.+.....  +++
T Consensus       208 ~~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~-~~~~~~~~~~~~~g~i  285 (450)
T PRK08261        208 LAGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITAPD-APARIAEHLAERHGGL  285 (450)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHH-HHHHHHHHHHHhCCCC
Confidence            35789999988 9999999999989998 888887743  3332 334455533 23433322 23333333222  268


Q ss_pred             cEEEEccC
Q 018072          267 DRSVECTG  274 (361)
Q Consensus       267 Dvvid~~g  274 (361)
                      |++|+++|
T Consensus       286 d~vi~~AG  293 (450)
T PRK08261        286 DIVVHNAG  293 (450)
T ss_pred             CEEEECCC
Confidence            99999998

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=96.91  E-value=0.01  Score=56.52  Aligned_cols=97  Identities=16%  Similarity=0.234  Sum_probs=64.8

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcC---CC-EEEcCCCCCccHHHHHHHHcCCCccEEEEc
Q 018072          197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG---VT-DFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  272 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G---~~-~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~  272 (361)
                      .+|||+|+|.+|+.+++.+...+-.+|++.+++.++.+.+....   .+ ..+|..+    .. .+.++.. ++|+||++
T Consensus         2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d----~~-al~~li~-~~d~VIn~   75 (389)
T COG1748           2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAAD----VD-ALVALIK-DFDLVINA   75 (389)
T ss_pred             CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccC----hH-HHHHHHh-cCCEEEEe
Confidence            47999999999999999988888559999999999999887764   22 2333332    21 3333332 35999999


Q ss_pred             cCChHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072          273 TGNIDNMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       273 ~g~~~~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      .+....+...-.+++.+ =.++......
T Consensus        76 ~p~~~~~~i~ka~i~~g-v~yvDts~~~  102 (389)
T COG1748          76 APPFVDLTILKACIKTG-VDYVDTSYYE  102 (389)
T ss_pred             CCchhhHHHHHHHHHhC-CCEEEcccCC
Confidence            98855554444455543 3455554433

>PRK07326 short chain dehydrogenase; Provisional

Probab=96.91  E-value=0.015  Score=51.64  Aligned_cols=80  Identities=23%  Similarity=0.336  Sum_probs=51.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCC---CEEEcCCCCC-ccHHHHHHHHcC--CCc
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGV---TDFVNTSEHD-RPIQEVIAEMTN--GGV  266 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~---~~vv~~~~~~-~~~~~~i~~~~~--~g~  266 (361)
                      .+.+++|+|+ |.+|...++.+...|. +|+++++++++.+.+. ++..   -+.+..+-.+ ..+.+.+.....  +++
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   83 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL   83 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999998 9999999988888898 7999999887765543 3321   1222222121 123333433322  378


Q ss_pred             cEEEEccCC
Q 018072          267 DRSVECTGN  275 (361)
Q Consensus       267 Dvvid~~g~  275 (361)
                      |++|++.|.
T Consensus        84 d~vi~~ag~   92 (237)
T PRK07326         84 DVLIANAGV   92 (237)
T ss_pred             CEEEECCCC
Confidence            999998764

>PRK12828 short chain dehydrogenase; Provisional

Probab=96.90  E-value=0.016  Score=51.21  Aligned_cols=78  Identities=22%  Similarity=0.315  Sum_probs=49.8

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHH----HHHcCCCEE-EcCCCCCccHHHHHHHHcC--CCcc
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE----AKKFGVTDF-VNTSEHDRPIQEVIAEMTN--GGVD  267 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~----~~~~G~~~v-v~~~~~~~~~~~~i~~~~~--~g~D  267 (361)
                      +.++||+|+ |.+|...++.+...|+ +|+.+++++++...    +...+...+ .|..+. .++.+.+.....  +++|
T Consensus         7 ~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~~d   84 (239)
T PRK12828          7 GKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLVDP-QAARRAVDEVNRQFGRLD   84 (239)
T ss_pred             CCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecCCH-HHHHHHHHHHHHHhCCcC
Confidence            679999998 9999999998888898 89999997765432    222333222 222221 123333333222  3789


Q ss_pred             EEEEccCC
Q 018072          268 RSVECTGN  275 (361)
Q Consensus       268 vvid~~g~  275 (361)
                      +|+++.|.
T Consensus        85 ~vi~~ag~   92 (239)
T PRK12828         85 ALVNIAGA   92 (239)
T ss_pred             EEEECCcc
Confidence            99998874

>PRK04148 hypothetical protein; Provisional

Probab=96.90  E-value=0.0053  Score=49.52  Aligned_cols=95  Identities=18%  Similarity=0.193  Sum_probs=68.2

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCC-CCCccHHHHHHHHcCCCccEEE
Q 018072          192 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS-EHDRPIQEVIAEMTNGGVDRSV  270 (361)
Q Consensus       192 ~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~-~~~~~~~~~i~~~~~~g~Dvvi  270 (361)
                      ..+++.+++++|.| .|...++.+...|. .|+++|.+++..+.+++.+.+.+.+.- +.+.++        -+++|+|.
T Consensus        13 ~~~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~~~--------y~~a~liy   82 (134)
T PRK04148         13 EKGKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVDDLFNPNLEI--------YKNAKLIY   82 (134)
T ss_pred             ccccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEECcCCCCCHHH--------HhcCCEEE
Confidence            33456889999999 78755556667898 999999999999999998876655422 222111        13799999


Q ss_pred             EccCChHHHHHHHHHhcCCCcEEEEE
Q 018072          271 ECTGNIDNMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       271 d~~g~~~~~~~~~~~l~~~~G~iv~~  296 (361)
                      ..-..++.....++.-+.-+..++..
T Consensus        83 sirpp~el~~~~~~la~~~~~~~~i~  108 (134)
T PRK04148         83 SIRPPRDLQPFILELAKKINVPLIIK  108 (134)
T ss_pred             EeCCCHHHHHHHHHHHHHcCCCEEEE
Confidence            99988888888777777652344444

>PRK12742 oxidoreductase; Provisional

Probab=96.90  E-value=0.026  Score=49.98  Aligned_cols=101  Identities=23%  Similarity=0.300  Sum_probs=62.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHH-HHcCCCEEEcCCCCC-ccHHHHHHHHcCCCccEEE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEA-KKFGVTDFVNTSEHD-RPIQEVIAEMTNGGVDRSV  270 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~-~~~~~~~~-~~~G~~~vv~~~~~~-~~~~~~i~~~~~~g~Dvvi  270 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+.+.+ ++++.+.+ .+++...+ ..+..+ ..+.+.+...  +++|++|
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~-~~D~~~~~~~~~~~~~~--~~id~li   80 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAV-QTDSADRDAVIDVVRKS--GALDILV   80 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEE-ecCCCCHHHHHHHHHHh--CCCcEEE
Confidence            3679999998 9999999999888998 7766644 44554443 44565432 222222 1233333221  3689999


Q ss_pred             EccCChH----------H---------------HHHHHHHhcCCCcEEEEEcCCC
Q 018072          271 ECTGNID----------N---------------MISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       271 d~~g~~~----------~---------------~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      +++|...          .               ...+.+.++.. |+++.++...
T Consensus        81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-g~iv~isS~~  134 (237)
T PRK12742         81 VNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEG-GRIIIIGSVN  134 (237)
T ss_pred             ECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcC-CeEEEEeccc
Confidence            9987421          0               12334456666 8999887644

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=96.87  E-value=0.0066  Score=54.89  Aligned_cols=80  Identities=21%  Similarity=0.334  Sum_probs=56.2

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-----cCCCE-EE--cCCCCCccHHHHHHHHcCC
Q 018072          194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVTD-FV--NTSEHDRPIQEVIAEMTNG  264 (361)
Q Consensus       194 ~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-----~G~~~-vv--~~~~~~~~~~~~i~~~~~~  264 (361)
                      ..+.++||+|| +++|...+..+...|. +++.+.|+++|++.+.+     .|... ++  |..+.+ +......++...
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~-~~~~l~~~l~~~   81 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPE-ALERLEDELKER   81 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChh-HHHHHHHHHHhc
Confidence            46789999998 8999999998888898 99999999999888743     33332 33  233322 233223333332


Q ss_pred             --CccEEEEccCC
Q 018072          265 --GVDRSVECTGN  275 (361)
Q Consensus       265 --g~Dvvid~~g~  275 (361)
                        .+|+.++++|-
T Consensus        82 ~~~IdvLVNNAG~   94 (265)
T COG0300          82 GGPIDVLVNNAGF   94 (265)
T ss_pred             CCcccEEEECCCc
Confidence              79999999984

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.85  E-value=0.043  Score=47.85  Aligned_cols=119  Identities=12%  Similarity=-0.001  Sum_probs=66.7

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChh-hHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK-RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  273 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~-~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~  273 (361)
                      .|.+|||+|+|.+|...+..+...|+ .|++++.... .+..+.+.+.-. +....    +.+.  .+  .++|+||-++
T Consensus         9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~~~i~-~~~~~----~~~~--~l--~~adlViaaT   78 (202)
T PRK06718          9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEEGKIR-WKQKE----FEPS--DI--VDAFLVIAAT   78 (202)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhCCCEE-EEecC----CChh--hc--CCceEEEEcC
Confidence            46799999999999999988888897 8888865432 222222222111 11111    1000  01  2689999999


Q ss_pred             CChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecC
Q 018072          274 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN  325 (361)
Q Consensus       274 g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~  325 (361)
                      +.++. ...+...+.. +.++.+...+...++-++...-...+++--+..|.
T Consensus        79 ~d~el-N~~i~~~a~~-~~lvn~~d~~~~~~f~~Pa~~~~g~l~iaIsT~G~  128 (202)
T PRK06718         79 NDPRV-NEQVKEDLPE-NALFNVITDAESGNVVFPSALHRGKLTISVSTDGA  128 (202)
T ss_pred             CCHHH-HHHHHHHHHh-CCcEEECCCCccCeEEEeeEEEcCCeEEEEECCCC
Confidence            99554 4444444454 66666644333444544433222556665454443

>PRK08017 oxidoreductase; Provisional

Probab=96.78  E-value=0.0087  Score=53.80  Aligned_cols=77  Identities=18%  Similarity=0.327  Sum_probs=54.6

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEE-EcCCCCCccHHH---HHHHHcCCCccEEEE
Q 018072          197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQE---VIAEMTNGGVDRSVE  271 (361)
Q Consensus       197 ~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~v-v~~~~~~~~~~~---~i~~~~~~g~Dvvid  271 (361)
                      ++++|+|+ |++|...++.+...|. +|++++++.++.+.+++.+++.+ .|..+.+ .+.+   .+.....+.+|.++.
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~i~~~~~~~~~~ii~   80 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDDPE-SVERAADEVIALTDNRLYGLFN   80 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCCHH-HHHHHHHHHHHhcCCCCeEEEE
Confidence            47999998 9999999999988898 89999999999888877776543 2332221 1222   222223347899998


Q ss_pred             ccCC
Q 018072          272 CTGN  275 (361)
Q Consensus       272 ~~g~  275 (361)
                      +.|.
T Consensus        81 ~ag~   84 (256)
T PRK08017         81 NAGF   84 (256)
T ss_pred             CCCC
Confidence            8763

>PRK08265 short chain dehydrogenase; Provisional

Probab=96.76  E-value=0.02  Score=51.82  Aligned_cols=79  Identities=25%  Similarity=0.320  Sum_probs=52.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCCCE-E--EcCCCCCccHHHHHHHHcC--CCcc
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD-F--VNTSEHDRPIQEVIAEMTN--GGVD  267 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~-~~~G~~~-v--v~~~~~~~~~~~~i~~~~~--~g~D  267 (361)
                      .+.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++++... .  .|..+. .++.+.+.....  +.+|
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~g~id   82 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITDD-AAIERAVATVVARFGRVD   82 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCH-HHHHHHHHHHHHHhCCCC
Confidence            4679999988 9999999998888999 899999988765554 3445322 2  222222 123333333222  3689


Q ss_pred             EEEEccCC
Q 018072          268 RSVECTGN  275 (361)
Q Consensus       268 vvid~~g~  275 (361)
                      +++++.|.
T Consensus        83 ~lv~~ag~   90 (261)
T PRK08265         83 ILVNLACT   90 (261)
T ss_pred             EEEECCCC
Confidence            99999874

>PRK14967 putative methyltransferase; Provisional

Probab=96.76  E-value=0.024  Score=50.21  Aligned_cols=99  Identities=23%  Similarity=0.165  Sum_probs=66.3

Q ss_pred             hhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcCC
Q 018072          189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNG  264 (361)
Q Consensus       189 ~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~~  264 (361)
                      ....++++++||-+|+|. |..++.+++. +..+|+++|.+++.++.+++    .+....+..  .+  +.+.   +.++
T Consensus        30 ~~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~--~d--~~~~---~~~~  100 (223)
T PRK14967         30 AAEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRR--GD--WARA---VEFR  100 (223)
T ss_pred             HhcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEE--Cc--hhhh---ccCC
Confidence            345678899999999987 8888888875 55589999999988876654    344322211  12  2221   2234


Q ss_pred             CccEEEEccCC---------------------------hHHHHHHHHHhcCCCcEEEEEc
Q 018072          265 GVDRSVECTGN---------------------------IDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       265 g~Dvvid~~g~---------------------------~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      .||+|+...+-                           ...+..+.+.|+++ |+++++-
T Consensus       101 ~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~g-G~l~~~~  159 (223)
T PRK14967        101 PFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPG-GSLLLVQ  159 (223)
T ss_pred             CeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCC-cEEEEEE
Confidence            79999986320                           11345678899998 9988763

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=96.76  E-value=0.0091  Score=52.63  Aligned_cols=102  Identities=20%  Similarity=0.257  Sum_probs=68.3

Q ss_pred             hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHc
Q 018072          188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT  262 (361)
Q Consensus       188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~  262 (361)
                      .+...++++++||-+|+|. |..++.+++..+. .+|++++.+++..+.+++    +|.+.+.. ...+  ..+..  ..
T Consensus        70 ~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~-~~~d--~~~~~--~~  143 (215)
T TIGR00080        70 TELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIV-IVGD--GTQGW--EP  143 (215)
T ss_pred             HHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEE-EECC--cccCC--cc
Confidence            4566789999999999876 7777777877653 369999999987777653    45432211 1111  11000  01


Q ss_pred             CCCccEEEEccCChHHHHHHHHHhcCCCcEEEEE
Q 018072          263 NGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       263 ~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~  296 (361)
                      .+.||+|+-....+...+...+.|+++ |+++..
T Consensus       144 ~~~fD~Ii~~~~~~~~~~~~~~~L~~g-G~lv~~  176 (215)
T TIGR00080       144 LAPYDRIYVTAAGPKIPEALIDQLKEG-GILVMP  176 (215)
T ss_pred             cCCCCEEEEcCCcccccHHHHHhcCcC-cEEEEE
Confidence            137999987665556777888999997 998765

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function

Probab=96.75  E-value=0.08  Score=49.02  Aligned_cols=139  Identities=12%  Similarity=0.104  Sum_probs=85.1

Q ss_pred             cceeeEEEeccceEECCCCCChhhhhccccchhhhhhhhhhhc---CCCCCCEEEEEcC-CHHHHHHHHHHH-HcCCCeE
Q 018072          149 TFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA---KPERGSSVAVFGL-GAVGLAAAEGAR-IAGASRI  223 (361)
Q Consensus       149 ~~ae~v~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~---~~~~g~~VlI~G~-g~vG~~a~~~a~-~~g~~~V  223 (361)
                      .|-+|..+..+..+.-  .....++.+-| -+.|.|-. .+..   +.-..+.|+|.+| +..++..+..++ ..+..++
T Consensus        90 ~YN~Y~r~~~d~~y~~--~~e~~~~LlrP-Lf~Tsfll-~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~  165 (314)
T PF11017_consen   90 IYNQYLRVSADPAYDP--EREDWQMLLRP-LFITSFLL-DDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKV  165 (314)
T ss_pred             hhhceeecCCCcccCc--chhHHHHHHHH-HHHHHHHH-HHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceE
Confidence            4555655554433211  11122233333 55666642 2211   2233467777777 888888888877 5555589


Q ss_pred             EEEcCChhhHHHHHHcCC-CEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072          224 IGVDRSSKRFEEAKKFGV-TDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       224 i~~~~~~~~~~~~~~~G~-~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      +++++.. ...+.+++|. +.++.|++-        ..+....--+++|..|+.+......+.+...--..+.+|...
T Consensus       166 vglTS~~-N~~Fve~lg~Yd~V~~Yd~i--------~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th  234 (314)
T PF11017_consen  166 VGLTSAR-NVAFVESLGCYDEVLTYDDI--------DSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATH  234 (314)
T ss_pred             EEEecCc-chhhhhccCCceEEeehhhh--------hhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccC
Confidence            9995554 4568888998 667766542        233334567999999998888888888876413456777655

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=96.75  E-value=0.029  Score=51.15  Aligned_cols=109  Identities=25%  Similarity=0.313  Sum_probs=76.2

Q ss_pred             hhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHH
Q 018072          184 LGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIA  259 (361)
Q Consensus       184 ~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~  259 (361)
                      +..+.+..+++||++||=+|+|- |.+++-.|+..|+ +|++++-+++..+.+++    .|...-+...-.+  +    +
T Consensus        61 ~~~~~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d--~----r  132 (283)
T COG2230          61 LDLILEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQD--Y----R  132 (283)
T ss_pred             HHHHHHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEecc--c----c
Confidence            33457889999999999999976 7778888888898 99999999998877754    5665211111111  1    1


Q ss_pred             HHcCCCccEEEE-----ccCC---hHHHHHHHHHhcCCCcEEEEEcCCCCC
Q 018072          260 EMTNGGVDRSVE-----CTGN---IDNMISAFECVHDGWGVAVLVGVPSKD  302 (361)
Q Consensus       260 ~~~~~g~Dvvid-----~~g~---~~~~~~~~~~l~~~~G~iv~~g~~~~~  302 (361)
                      .+. +.||.|+.     .+|.   ++.+..+-+.|+++ |++.+.......
T Consensus       133 d~~-e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~-G~~llh~I~~~~  181 (283)
T COG2230         133 DFE-EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPG-GRMLLHSITGPD  181 (283)
T ss_pred             ccc-cccceeeehhhHHHhCcccHHHHHHHHHhhcCCC-ceEEEEEecCCC
Confidence            111 24777764     4444   34678899999998 999888765544

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=96.75  E-value=0.0043  Score=52.48  Aligned_cols=101  Identities=22%  Similarity=0.223  Sum_probs=65.4

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEc-CCCC--------------CccHHHHHHH
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN-TSEH--------------DRPIQEVIAE  260 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~-~~~~--------------~~~~~~~i~~  260 (361)
                      ..+|+|+|+|.+|..|+.+++.+|+ +|+..+...++++..+..+...+.. +.+.              .......+.+
T Consensus        20 p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~   98 (168)
T PF01262_consen   20 PAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE   98 (168)
T ss_dssp             T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred             CeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence            3789999999999999999999999 8999999999999888888765433 1111              0112222222


Q ss_pred             HcCCCccEEEEccC--C---hHH-HHHHHHHhcCCCcEEEEEcCC
Q 018072          261 MTNGGVDRSVECTG--N---IDN-MISAFECVHDGWGVAVLVGVP  299 (361)
Q Consensus       261 ~~~~g~Dvvid~~g--~---~~~-~~~~~~~l~~~~G~iv~~g~~  299 (361)
                      ... .+|++|.+.-  +   |.. -+..++.|++. ..++.+...
T Consensus        99 ~i~-~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~g-svIvDis~D  141 (168)
T PF01262_consen   99 FIA-PADIVIGNGLYWGKRAPRLVTEEMVKSMKPG-SVIVDISCD  141 (168)
T ss_dssp             HHH-H-SEEEEHHHBTTSS---SBEHHHHHTSSTT-EEEEETTGG
T ss_pred             HHh-hCcEEeeecccCCCCCCEEEEhHHhhccCCC-ceEEEEEec
Confidence            211 4799886431  1   111 24667788886 778887643

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PRK08177 short chain dehydrogenase; Provisional

Probab=96.75  E-value=0.011  Score=52.22  Aligned_cols=78  Identities=10%  Similarity=0.162  Sum_probs=52.7

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCC-ccHHHHHHHHcCCCccEEEEccC
Q 018072          197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD-RPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       197 ~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~-~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      .+++|+|+ |++|...+..+...|. +|+++++++++.+.+++++-...+..+-.+ ..+.+.+..+..+++|++|.++|
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag   80 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG   80 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence            46899987 9999998888888898 899999998877666554332222222222 12334444443347999999886


Q ss_pred             C
Q 018072          275 N  275 (361)
Q Consensus       275 ~  275 (361)
                      .
T Consensus        81 ~   81 (225)
T PRK08177         81 I   81 (225)
T ss_pred             c
Confidence            4

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.74  E-value=0.015  Score=52.99  Aligned_cols=113  Identities=20%  Similarity=0.237  Sum_probs=71.4

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCE-EEc--CCCCC-ccHHHHHHHHc--
Q 018072          194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FVN--TSEHD-RPIQEVIAEMT--  262 (361)
Q Consensus       194 ~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~-vv~--~~~~~-~~~~~~i~~~~--  262 (361)
                      -.|..|+|+|| +++|...+.-....|+ +++.+.+..++++.+    ++.+... ++.  .+-.+ ++..+.+.+..  
T Consensus        10 ~~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~   88 (282)
T KOG1205|consen   10 LAGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRH   88 (282)
T ss_pred             hCCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHh
Confidence            35789999999 8999988877778898 566665666665555    4455443 222  11111 22444443332  


Q ss_pred             CCCccEEEEccCChH-------------------------HHHHHHHHhcCCC-cEEEEEcCCCCCceeec
Q 018072          263 NGGVDRSVECTGNID-------------------------NMISAFECVHDGW-GVAVLVGVPSKDAVFMT  307 (361)
Q Consensus       263 ~~g~Dvvid~~g~~~-------------------------~~~~~~~~l~~~~-G~iv~~g~~~~~~~~~~  307 (361)
                      -+++|+.++++|-..                         ....++..|++.+ |.|+.++...+...+++
T Consensus        89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~  159 (282)
T KOG1205|consen   89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPF  159 (282)
T ss_pred             cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCc
Confidence            238999999887421                         1246777777654 89999987766555554

>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]

Probab=96.74  E-value=0.024  Score=52.10  Aligned_cols=101  Identities=25%  Similarity=0.330  Sum_probs=65.3

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcCCCccE
Q 018072          193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGGVDR  268 (361)
Q Consensus       193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dv  268 (361)
                      .++|.+||=+|+|. |.+++..+ .+|+.+|+++|.++-..+.+++    .+.+.........     .......+.||+
T Consensus       160 ~~~g~~vlDvGcGS-GILaIAa~-kLGA~~v~g~DiDp~AV~aa~eNa~~N~v~~~~~~~~~~-----~~~~~~~~~~Dv  232 (300)
T COG2264         160 LKKGKTVLDVGCGS-GILAIAAA-KLGAKKVVGVDIDPQAVEAARENARLNGVELLVQAKGFL-----LLEVPENGPFDV  232 (300)
T ss_pred             hcCCCEEEEecCCh-hHHHHHHH-HcCCceEEEecCCHHHHHHHHHHHHHcCCchhhhccccc-----chhhcccCcccE
Confidence            57999999999865 66666555 4578799999999987766654    3443211111110     111122247999


Q ss_pred             EEEccCCh---HHHHHHHHHhcCCCcEEEEEcCCCC
Q 018072          269 SVECTGNI---DNMISAFECVHDGWGVAVLVGVPSK  301 (361)
Q Consensus       269 vid~~g~~---~~~~~~~~~l~~~~G~iv~~g~~~~  301 (361)
                      |+-+.=-.   ...+...+.++++ |++++.|....
T Consensus       233 IVANILA~vl~~La~~~~~~lkpg-g~lIlSGIl~~  267 (300)
T COG2264         233 IVANILAEVLVELAPDIKRLLKPG-GRLILSGILED  267 (300)
T ss_pred             EEehhhHHHHHHHHHHHHHHcCCC-ceEEEEeehHh
Confidence            99765221   2346777889997 99999997663

>PRK06057 short chain dehydrogenase; Provisional

Probab=96.73  E-value=0.01  Score=53.42  Aligned_cols=79  Identities=20%  Similarity=0.302  Sum_probs=53.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCCCEE-EcCCCCCccHHHHHHHHcC--CCccEE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDF-VNTSEHDRPIQEVIAEMTN--GGVDRS  269 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~-~~~G~~~v-v~~~~~~~~~~~~i~~~~~--~g~Dvv  269 (361)
                      .|.+|+|+|+ |++|...++.+...|+ +|+++++++.+.+.. .+++...+ .|..+.+ .+.+.+....+  +++|++
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~v   83 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTDED-AVNALFDTAAETYGSVDIA   83 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHH-HHHHHHHHHHHHcCCCCEE
Confidence            4789999998 9999999999988998 899999988776554 34544322 2333321 23333333221  368999


Q ss_pred             EEccCC
Q 018072          270 VECTGN  275 (361)
Q Consensus       270 id~~g~  275 (361)
                      +.++|.
T Consensus        84 i~~ag~   89 (255)
T PRK06057         84 FNNAGI   89 (255)
T ss_pred             EECCCc
Confidence            999874

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.71  E-value=0.04  Score=46.04  Aligned_cols=117  Identities=15%  Similarity=0.107  Sum_probs=65.0

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      .|.+|+|+|+|.+|.--++.+...|+ .|++++  ++..+.+.+++.-... ...    +.+.  .+  .++|+|+-+++
T Consensus        12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~~~-~~~----~~~~--dl--~~a~lViaaT~   79 (157)
T PRK06719         12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYITWK-QKT----FSND--DI--KDAHLIYAATN   79 (157)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcEEE-ecc----cChh--cC--CCceEEEECCC
Confidence            46889999999999998888888898 788773  4444444445422221 111    1100  01  26899999998


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecC
Q 018072          275 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN  325 (361)
Q Consensus       275 ~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~  325 (361)
                      .++ +...+..++.. +.++..-......++.++...-..++++-=+..|.
T Consensus        80 d~e-~N~~i~~~a~~-~~~vn~~d~~~~~~f~~pa~v~~~~l~iaisT~G~  128 (157)
T PRK06719         80 QHA-VNMMVKQAAHD-FQWVNVVSDGTESSFHTPGVIRNDEYVVTISTSGK  128 (157)
T ss_pred             CHH-HHHHHHHHHHH-CCcEEECCCCCcCcEEeeeEEEECCeEEEEECCCc
Confidence            854 45555555443 33443332222334444322112456655444443

>PRK06139 short chain dehydrogenase; Provisional

Probab=96.70  E-value=0.0088  Score=56.41  Aligned_cols=79  Identities=22%  Similarity=0.414  Sum_probs=53.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCEE---EcCCCCCccHHHHHHHHc--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF---VNTSEHDRPIQEVIAEMT--NG  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~v---v~~~~~~~~~~~~i~~~~--~~  264 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++++.+    ++.|.+..   .|..+.+ .+.+.+....  .+
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~-~v~~~~~~~~~~~g   83 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDAD-QVKALATQAASFGG   83 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHH-HHHHHHHHHHHhcC
Confidence            4679999998 9999999999999999 899999998887644    33565432   2333221 1222222221  24


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      ++|++|+++|.
T Consensus        84 ~iD~lVnnAG~   94 (330)
T PRK06139         84 RIDVWVNNVGV   94 (330)
T ss_pred             CCCEEEECCCc
Confidence            79999999973

>PRK07806 short chain dehydrogenase; Provisional

Probab=96.69  E-value=0.034  Score=49.68  Aligned_cols=101  Identities=20%  Similarity=0.247  Sum_probs=61.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChh-hHHHH----HHcCCCE-EE--cCCCCCccHHHHHHHHcC--
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK-RFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMTN--  263 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~-~~~~~----~~~G~~~-vv--~~~~~~~~~~~~i~~~~~--  263 (361)
                      .+.+++|+|+ |++|...+..+...|. +|+++.++.+ +.+.+    +..+... .+  |..+.+ ++.+.+.....  
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~   82 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEE-SVAALMDTAREEF   82 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHH-HHHHHHHHHHHhC
Confidence            3678999998 9999999998888898 7888877643 33222    2233321 22  332221 23333333322  


Q ss_pred             CCccEEEEccCCh-------------------HHHHHHHHHhcCCCcEEEEEcC
Q 018072          264 GGVDRSVECTGNI-------------------DNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       264 ~g~Dvvid~~g~~-------------------~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      +++|+++.+.+..                   ..++.+.+.+... |+++.++.
T Consensus        83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~-~~iv~isS  135 (248)
T PRK07806         83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAG-SRVVFVTS  135 (248)
T ss_pred             CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCC-ceEEEEeC
Confidence            2689999888642                   1334555555666 88888865

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.63  E-value=0.013  Score=58.27  Aligned_cols=75  Identities=24%  Similarity=0.219  Sum_probs=56.2

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEE
Q 018072          192 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  271 (361)
Q Consensus       192 ~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid  271 (361)
                      .+.+|++|+|+|.|..|++++++++..|+ .|+++|.++++.+.++++|+..+ ....    ..+.+     ..+|+|+.
T Consensus         8 ~~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~~-~~~~----~~~~l-----~~~D~VV~   76 (488)
T PRK03369          8 PLLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVATV-STSD----AVQQI-----ADYALVVT   76 (488)
T ss_pred             cccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEEE-cCcc----hHhHh-----hcCCEEEE
Confidence            35678999999999999999999999998 89999988777777777887432 2111    11111     24799999


Q ss_pred             ccCChH
Q 018072          272 CTGNID  277 (361)
Q Consensus       272 ~~g~~~  277 (361)
                      +.|-+.
T Consensus        77 SpGi~~   82 (488)
T PRK03369         77 SPGFRP   82 (488)
T ss_pred             CCCCCC
Confidence            998644

>PRK07109 short chain dehydrogenase; Provisional

Probab=96.63  E-value=0.023  Score=53.65  Aligned_cols=79  Identities=19%  Similarity=0.281  Sum_probs=53.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCEE---EcCCCCCccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF---VNTSEHDRPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~v---v~~~~~~~~~~~~i~~~~~--~  264 (361)
                      .+.+++|+|+ |++|...++.+...|+ +|+.+++++++++.+    ++.|....   .|..+.+ ++.+.+.....  +
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~-~v~~~~~~~~~~~g   84 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAE-AVQAAADRAEEELG   84 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHH-HHHHHHHHHHHHCC
Confidence            4578999998 9999999998888998 899999988776544    23455432   2332221 23333332222  3


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      ++|++|+++|.
T Consensus        85 ~iD~lInnAg~   95 (334)
T PRK07109         85 PIDTWVNNAMV   95 (334)
T ss_pred             CCCEEEECCCc
Confidence            78999999874

>PRK07060 short chain dehydrogenase; Provisional

Probab=96.63  E-value=0.017  Score=51.40  Aligned_cols=77  Identities=26%  Similarity=0.462  Sum_probs=52.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCEE-EcCCCCCccHHHHHHHHcCCCccEEEE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVE  271 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~v-v~~~~~~~~~~~~i~~~~~~g~Dvvid  271 (361)
                      .+.+++|+|+ |++|...++.+...|. +|+.++++.++.+.+.+ .+...+ .|..+.+ .+.+.+..  .+++|++|+
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~--~~~~d~vi~   83 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVGDDA-AIRAALAA--AGAFDGLVN   83 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCCCHH-HHHHHHHH--hCCCCEEEE
Confidence            4679999998 8999999999999998 89999998877765543 444322 2332211 12222222  136899999


Q ss_pred             ccCC
Q 018072          272 CTGN  275 (361)
Q Consensus       272 ~~g~  275 (361)
                      ++|.
T Consensus        84 ~ag~   87 (245)
T PRK07060         84 CAGI   87 (245)
T ss_pred             CCCC
Confidence            9874

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=96.62  E-value=0.0055  Score=56.06  Aligned_cols=101  Identities=25%  Similarity=0.266  Sum_probs=62.4

Q ss_pred             hhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCEEEcCCCCCccHHHHHHHHc
Q 018072          187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAEMT  262 (361)
Q Consensus       187 ~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~vv~~~~~~~~~~~~i~~~~  262 (361)
                      +.+++++++|++||-+|+|- |.++..+|+..|+ +|++++.+++..++++    +.|....+.....+  +    +++.
T Consensus        54 ~~~~~~l~~G~~vLDiGcGw-G~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D--~----~~~~  125 (273)
T PF02353_consen   54 LCEKLGLKPGDRVLDIGCGW-GGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRLQD--Y----RDLP  125 (273)
T ss_dssp             HHTTTT--TT-EEEEES-TT-SHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES---G----GG--
T ss_pred             HHHHhCCCCCCEEEEeCCCc-cHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEee--c----cccC
Confidence            46788999999999999973 7777788888898 9999999999888775    35653211111111  1    1111


Q ss_pred             CCCccEEEE-----ccCC---hHHHHHHHHHhcCCCcEEEEEc
Q 018072          263 NGGVDRSVE-----CTGN---IDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       263 ~~g~Dvvid-----~~g~---~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                       +.||.|+.     .+|.   +..+..+.+.|+|+ |++++-.
T Consensus       126 -~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~Lkpg-G~~~lq~  166 (273)
T PF02353_consen  126 -GKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPG-GRLVLQT  166 (273)
T ss_dssp             --S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETT-EEEEEEE
T ss_pred             -CCCCEEEEEechhhcChhHHHHHHHHHHHhcCCC-cEEEEEe
Confidence             27898875     3443   34578888999998 9987554

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=96.60  E-value=0.024  Score=50.52  Aligned_cols=107  Identities=20%  Similarity=0.279  Sum_probs=76.0

Q ss_pred             hhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHc
Q 018072          187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT  262 (361)
Q Consensus       187 ~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~  262 (361)
                      +....+.++|++||=+|+|. |-.|..+++..|-..|+++|.++.-++.+++    .|... +.+...+   ++.+- +.
T Consensus        43 ~i~~~~~~~g~~vLDva~GT-Gd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~~d---Ae~LP-f~  116 (238)
T COG2226          43 LISLLGIKPGDKVLDVACGT-GDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVVGD---AENLP-FP  116 (238)
T ss_pred             HHHhhCCCCCCEEEEecCCc-cHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEEec---hhhCC-CC
Confidence            34556677999999998765 8999999999987799999999998888865    23222 2222221   11111 23


Q ss_pred             CCCccEEEEccC------ChHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072          263 NGGVDRSVECTG------NIDNMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       263 ~~g~Dvvid~~g------~~~~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      +..||+|..+.|      -+..+....+.|+|+ |+++.+....
T Consensus       117 D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpg-G~~~vle~~~  159 (238)
T COG2226         117 DNSFDAVTISFGLRNVTDIDKALKEMYRVLKPG-GRLLVLEFSK  159 (238)
T ss_pred             CCccCEEEeeehhhcCCCHHHHHHHHHHhhcCC-eEEEEEEcCC
Confidence            337899988765      234788999999998 9998887655

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.58  E-value=0.02  Score=49.94  Aligned_cols=99  Identities=21%  Similarity=0.245  Sum_probs=59.4

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh-------------------hhHH----HHHHcCCCEEEcCCCCCc
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-------------------KRFE----EAKKFGVTDFVNTSEHDR  252 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~-------------------~~~~----~~~~~G~~~vv~~~~~~~  252 (361)
                      ..+|+|+|+|++|...++.+...|..+++.+|.+.                   .|.+    .++++....-+.......
T Consensus        21 ~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~~i  100 (202)
T TIGR02356        21 NSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALKERV  100 (202)
T ss_pred             CCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEehhcC
Confidence            46899999999999999999999998999998772                   2222    223344332222111110


Q ss_pred             cHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcE-EEEEc
Q 018072          253 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGV-AVLVG  297 (361)
Q Consensus       253 ~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~-iv~~g  297 (361)
                       ..+.+.++. .++|+||+|+.+.+.....-+..... ++ ++..+
T Consensus       101 -~~~~~~~~~-~~~D~Vi~~~d~~~~r~~l~~~~~~~-~ip~i~~~  143 (202)
T TIGR02356       101 -TAENLELLI-NNVDLVLDCTDNFATRYLINDACVAL-GTPLISAA  143 (202)
T ss_pred             -CHHHHHHHH-hCCCEEEECCCCHHHHHHHHHHHHHc-CCCEEEEE
Confidence             011222222 26999999998866544444444444 43 44443

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK12939 short chain dehydrogenase; Provisional

Probab=96.57  E-value=0.029  Score=50.09  Aligned_cols=80  Identities=25%  Similarity=0.259  Sum_probs=51.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHD-RPIQEVIAEMTN--GG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g  265 (361)
                      ++.+++|+|+ |++|...+..+...|. +|+++++++++.+.+.    +.+... ++..+-.+ ..+.+.+.....  ++
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   84 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGG   84 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4688999998 9999999998888898 8888888887655432    233322 22222222 112222222221  37


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++|.++|.
T Consensus        85 id~vi~~ag~   94 (250)
T PRK12939         85 LDGLVNNAGI   94 (250)
T ss_pred             CCEEEECCCC
Confidence            8999999885

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.56  E-value=0.014  Score=49.89  Aligned_cols=90  Identities=31%  Similarity=0.405  Sum_probs=62.8

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  273 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~  273 (361)
                      -.|.+|.|+|.|.+|...++.++.+|. +|++++++..........+...    .+    +.+.+..     .|+|+.+.
T Consensus        34 l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~~----~~----l~ell~~-----aDiv~~~~   99 (178)
T PF02826_consen   34 LRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVEY----VS----LDELLAQ-----ADIVSLHL   99 (178)
T ss_dssp             STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEEE----SS----HHHHHHH------SEEEE-S
T ss_pred             cCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhccccccee----ee----hhhhcch-----hhhhhhhh
Confidence            468999999999999999999999999 9999999988766455555421    11    4444333     68888877


Q ss_pred             CC-hHH----HHHHHHHhcCCCcEEEEEcC
Q 018072          274 GN-IDN----MISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       274 g~-~~~----~~~~~~~l~~~~G~iv~~g~  298 (361)
                      .. +++    =...++.|+++ ..++.++-
T Consensus       100 plt~~T~~li~~~~l~~mk~g-a~lvN~aR  128 (178)
T PF02826_consen  100 PLTPETRGLINAEFLAKMKPG-AVLVNVAR  128 (178)
T ss_dssp             SSSTTTTTSBSHHHHHTSTTT-EEEEESSS
T ss_pred             ccccccceeeeeeeeeccccc-eEEEeccc
Confidence            63 111    24667788886 77777764

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK06953 short chain dehydrogenase; Provisional

Probab=96.56  E-value=0.018  Score=50.72  Aligned_cols=77  Identities=16%  Similarity=0.302  Sum_probs=53.2

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCE-EEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072          197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       197 ~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~-vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      .+++|+|+ |++|...++.+...|+ +|+.+++++++.+.++..+... ..|..+.+ .+.+.+..+.++++|+++.+.|
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~~d~vi~~ag   79 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVADPA-SVAGLAWKLDGEALDAAVYVAG   79 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCCHH-HHHHHHHHhcCCCCCEEEECCC
Confidence            36899987 9999999988777898 8999999988877777666532 23333322 2333333333337999999887


Q ss_pred             C
Q 018072          275 N  275 (361)
Q Consensus       275 ~  275 (361)
                      .
T Consensus        80 ~   80 (222)
T PRK06953         80 V   80 (222)
T ss_pred             c
Confidence            5

>COG4122 Predicted O-methyltransferase [General function prediction only]

Probab=96.56  E-value=0.036  Score=48.72  Aligned_cols=106  Identities=21%  Similarity=0.244  Sum_probs=74.4

Q ss_pred             hhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHH----cCCCEEEcCCC-CCccHHHHHHHHc
Q 018072          189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSE-HDRPIQEVIAEMT  262 (361)
Q Consensus       189 ~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g-~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~-~~~~~~~~i~~~~  262 (361)
                      ..++.+...+||=+|.+. |+.++.+|..+. -.+++.++.++++.+.+++    .|.+..+..-. .+  ..+.+....
T Consensus        53 ~L~~~~~~k~iLEiGT~~-GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~gd--al~~l~~~~  129 (219)
T COG4122          53 LLARLSGPKRILEIGTAI-GYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGGD--ALDVLSRLL  129 (219)
T ss_pred             HHHHhcCCceEEEeeccc-CHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecCc--HHHHHHhcc
Confidence            345566778888888643 777778888776 3489999999999888865    67766333222 23  455555544


Q ss_pred             CCCccEEEEccCC---hHHHHHHHHHhcCCCcEEEEEcC
Q 018072          263 NGGVDRSVECTGN---IDNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       263 ~~g~Dvvid~~g~---~~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      .+.||+||--...   +..++.+++.|+++ |.++.=..
T Consensus       130 ~~~fDliFIDadK~~yp~~le~~~~lLr~G-Gliv~DNv  167 (219)
T COG4122         130 DGSFDLVFIDADKADYPEYLERALPLLRPG-GLIVADNV  167 (219)
T ss_pred             CCCccEEEEeCChhhCHHHHHHHHHHhCCC-cEEEEeec
Confidence            4589999976653   45788999999997 88765543

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.55  E-value=0.033  Score=49.70  Aligned_cols=80  Identities=24%  Similarity=0.303  Sum_probs=51.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cC--CCE-EEcCCCCC-ccHHHHHHHHcC--CCc
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FG--VTD-FVNTSEHD-RPIQEVIAEMTN--GGV  266 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G--~~~-vv~~~~~~-~~~~~~i~~~~~--~g~  266 (361)
                      .+.++||+|+ |++|...++.+...|. +|+++++++++.+.+.+ +.  ... .+..+-.+ ..+...+.....  +.+
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   82 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSV   82 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            3568999998 9999999998888898 79999999877665432 22  211 22112121 123333332211  368


Q ss_pred             cEEEEccCC
Q 018072          267 DRSVECTGN  275 (361)
Q Consensus       267 Dvvid~~g~  275 (361)
                      |++|.++|.
T Consensus        83 d~vi~~ag~   91 (251)
T PRK07231         83 DILVNNAGT   91 (251)
T ss_pred             CEEEECCCC
Confidence            999999874

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=96.54  E-value=0.011  Score=54.00  Aligned_cols=98  Identities=20%  Similarity=0.156  Sum_probs=70.0

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC-
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG-  274 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g-  274 (361)
                      ..+|.|+|+|.+|.-++.+|..+|+ +|+..+.+.+|++.+..+-..++....+....+.+.+     .++|++|.++= 
T Consensus       168 ~~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v-----~~aDlvIgaVLI  241 (371)
T COG0686         168 PAKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAV-----KKADLVIGAVLI  241 (371)
T ss_pred             CccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHh-----hhccEEEEEEEe
Confidence            3468888999999999999999999 9999999999999998754444322222221233222     25899998752 


Q ss_pred             -C---hH-HHHHHHHHhcCCCcEEEEEcCCC
Q 018072          275 -N---ID-NMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       275 -~---~~-~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                       +   |. ..+..++.|+++ +.++.+....
T Consensus       242 pgakaPkLvt~e~vk~MkpG-sVivDVAiDq  271 (371)
T COG0686         242 PGAKAPKLVTREMVKQMKPG-SVIVDVAIDQ  271 (371)
T ss_pred             cCCCCceehhHHHHHhcCCC-cEEEEEEEcC
Confidence             1   11 356778999997 9998886543

>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial

Probab=96.53  E-value=0.012  Score=58.28  Aligned_cols=79  Identities=27%  Similarity=0.356  Sum_probs=56.8

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh---------------------hhHHHHHHcCCCEEEcCCCCCc
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS---------------------KRFEEAKKFGVTDFVNTSEHDR  252 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~---------------------~~~~~~~~~G~~~vv~~~~~~~  252 (361)
                      +.+++|+|+|+|+.|+.++..++..|. .|+.++..+                     ...++++++|++..++..... 
T Consensus       139 ~~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~-  216 (467)
T TIGR01318       139 PTGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGR-  216 (467)
T ss_pred             CCCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCC-
Confidence            468899999999999999999999999 788887664                     245677889987665543211 


Q ss_pred             cHHHHHHHHcCCCccEEEEccCChH
Q 018072          253 PIQEVIAEMTNGGVDRSVECTGNID  277 (361)
Q Consensus       253 ~~~~~i~~~~~~g~Dvvid~~g~~~  277 (361)
                      ++  .+..+. .++|.||.++|...
T Consensus       217 ~~--~~~~~~-~~~D~vilAtGa~~  238 (467)
T TIGR01318       217 DI--SLDDLL-EDYDAVFLGVGTYR  238 (467)
T ss_pred             cc--CHHHHH-hcCCEEEEEeCCCC
Confidence            01  111121 26999999999754

This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.53  E-value=0.022  Score=43.96  Aligned_cols=94  Identities=21%  Similarity=0.244  Sum_probs=60.9

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      .|.+|||+|+|.+|..-++.+...|+ +|++++...   +..+  +.-.....   .  +.+.    . .++|+|+-+++
T Consensus         6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~~~---~--~~~~----l-~~~~lV~~at~   69 (103)
T PF13241_consen    6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLIRR---E--FEED----L-DGADLVFAATD   69 (103)
T ss_dssp             TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEEES---S---GGG----C-TTESEEEE-SS
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHHhh---h--HHHH----H-hhheEEEecCC
Confidence            46899999999999999999999998 899987775   2222  11122211   1  2101    1 27999999999


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEcCCCCCcee
Q 018072          275 NIDNMISAFECVHDGWGVAVLVGVPSKDAVF  305 (361)
Q Consensus       275 ~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~  305 (361)
                      .+..-+...+..+.. |.++.+...+...++
T Consensus        70 d~~~n~~i~~~a~~~-~i~vn~~D~p~~~dF   99 (103)
T PF13241_consen   70 DPELNEAIYADARAR-GILVNVVDDPELCDF   99 (103)
T ss_dssp             -HHHHHHHHHHHHHT-TSEEEETT-CCCCSE
T ss_pred             CHHHHHHHHHHHhhC-CEEEEECCCcCCCeE
Confidence            976666777777766 888888755544443

>PRK07814 short chain dehydrogenase; Provisional

Probab=96.50  E-value=0.014  Score=52.87  Aligned_cols=79  Identities=19%  Similarity=0.276  Sum_probs=51.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCC-EE--EcCCCCCccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DF--VNTSEHDRPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~-~v--v~~~~~~~~~~~~i~~~~~--~  264 (361)
                      ++.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.+    .+.. .+  .|..+.+ .+.+.+.+...  +
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~   86 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPE-ATAGLAGQAVEAFG   86 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHH-HHHHHHHHHHHHcC
Confidence            4789999988 8999999998888999 99999998877655432    2322 12  2222221 12223333221  3


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      ++|++|+++|.
T Consensus        87 ~id~vi~~Ag~   97 (263)
T PRK07814         87 RLDIVVNNVGG   97 (263)
T ss_pred             CCCEEEECCCC
Confidence            78999999873

>PRK05872 short chain dehydrogenase; Provisional

Probab=96.50  E-value=0.017  Score=53.53  Aligned_cols=79  Identities=23%  Similarity=0.339  Sum_probs=54.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCC--CEE---EcCCCCCccHHHHHHHHcC--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGV--TDF---VNTSEHDRPIQEVIAEMTN--GG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~-~~~G~--~~v---v~~~~~~~~~~~~i~~~~~--~g  265 (361)
                      .|.++||+|+ |++|...++.+...|+ +|+.+++++++++.+ ++++.  ...   .|..+.+ ++.+.+.....  ++
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~g~   85 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTDLA-AMQAAAEEAVERFGG   85 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHH-HHHHHHHHHHHHcCC
Confidence            4789999998 9999999999999998 899999998877655 33542  211   2333221 23333333222  37


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++|+++|.
T Consensus        86 id~vI~nAG~   95 (296)
T PRK05872         86 IDVVVANAGI   95 (296)
T ss_pred             CCEEEECCCc
Confidence            8999999984

>PRK00811 spermidine synthase; Provisional

Probab=96.49  E-value=0.019  Score=52.83  Aligned_cols=99  Identities=17%  Similarity=0.157  Sum_probs=65.4

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcC------C--CEEEcCCCCCccHHHHHHHHcCCC
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG------V--TDFVNTSEHDRPIQEVIAEMTNGG  265 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G------~--~~vv~~~~~~~~~~~~i~~~~~~g  265 (361)
                      ...++||++|+|. |..+..+++..+..+|++++.+++-.+.++++-      .  +.-+.....|  ..+.+.. ..+.
T Consensus        75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~D--a~~~l~~-~~~~  150 (283)
T PRK00811         75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIGD--GIKFVAE-TENS  150 (283)
T ss_pred             CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEECc--hHHHHhh-CCCc
Confidence            4467999999876 666777777767679999999999988887631      1  1111111122  3334433 3448


Q ss_pred             ccEEEEccCC----------hHHHHHHHHHhcCCCcEEEEEc
Q 018072          266 VDRSVECTGN----------IDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       266 ~Dvvid~~g~----------~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      ||+|+.....          .+.++.+.+.|+++ |.++...
T Consensus       151 yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~g-Gvlv~~~  191 (283)
T PRK00811        151 FDVIIVDSTDPVGPAEGLFTKEFYENCKRALKED-GIFVAQS  191 (283)
T ss_pred             ccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEEeC
Confidence            9999975422          23467888999998 9988753

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=96.48  E-value=0.015  Score=52.60  Aligned_cols=78  Identities=24%  Similarity=0.307  Sum_probs=52.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc-CCCE-EE--cCCCCCccHHHHHHHHcC--CCcc
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GVTD-FV--NTSEHDRPIQEVIAEMTN--GGVD  267 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~-G~~~-vv--~~~~~~~~~~~~i~~~~~--~g~D  267 (361)
                      ++.+++|+|+ |++|...++.+...|+ +|+.+++++++++.+.+. +... .+  |..+. ....+.+.+...  +.+|
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~id   81 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSL-DDHKEAVARCVAAFGKID   81 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCCH-HHHHHHHHHHHHHhCCCC
Confidence            4689999988 8999999998888998 899999988877766543 3221 12  22221 123333433322  3689


Q ss_pred             EEEEccC
Q 018072          268 RSVECTG  274 (361)
Q Consensus       268 vvid~~g  274 (361)
                      ++|++.|
T Consensus        82 ~li~~Ag   88 (262)
T TIGR03325        82 CLIPNAG   88 (262)
T ss_pred             EEEECCC
Confidence            9999986

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK06949 short chain dehydrogenase; Provisional

Probab=96.47  E-value=0.017  Score=52.00  Aligned_cols=81  Identities=25%  Similarity=0.334  Sum_probs=53.1

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCC-EEEcCCCCC-ccHHHHHHHHc--CC
Q 018072          194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHD-RPIQEVIAEMT--NG  264 (361)
Q Consensus       194 ~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~-~vv~~~~~~-~~~~~~i~~~~--~~  264 (361)
                      -.+.+++|+|+ |++|...+..+...|+ +|+++++++++++.+.+    .+.. .++..+-.+ .++.+.+....  .+
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   85 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAG   85 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            34789999988 9999999999888998 89999999887655433    1221 222222211 12333333322  13


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      .+|++|+++|.
T Consensus        86 ~~d~li~~ag~   96 (258)
T PRK06949         86 TIDILVNNSGV   96 (258)
T ss_pred             CCCEEEECCCC
Confidence            78999999883

>PLN02366 spermidine synthase

Probab=96.46  E-value=0.022  Score=53.02  Aligned_cols=100  Identities=22%  Similarity=0.153  Sum_probs=66.4

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC-------EEEcCCCCCccHHHHHHHHcCCCc
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-------DFVNTSEHDRPIQEVIAEMTNGGV  266 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~-------~vv~~~~~~~~~~~~i~~~~~~g~  266 (361)
                      ...++|||+|+|. |.++..+++.-+..+|.+++.+++-.+.++++-..       .-+.....|  ..+.+++..++.|
T Consensus        90 ~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~D--a~~~l~~~~~~~y  166 (308)
T PLN02366         90 PNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGD--GVEFLKNAPEGTY  166 (308)
T ss_pred             CCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEECh--HHHHHhhccCCCC
Confidence            5578999999876 56667778776666899999999988888773211       011111112  3334444334479


Q ss_pred             cEEEEccCC----------hHHHHHHHHHhcCCCcEEEEEc
Q 018072          267 DRSVECTGN----------IDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       267 Dvvid~~g~----------~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      |+||.-...          .+.++.+.+.|+++ |.++..+
T Consensus       167 DvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pg-Gvlv~q~  206 (308)
T PLN02366        167 DAIIVDSSDPVGPAQELFEKPFFESVARALRPG-GVVCTQA  206 (308)
T ss_pred             CEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCC-cEEEECc
Confidence            999875433          23577889999998 9987654

>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences

Probab=96.45  E-value=0.0038  Score=57.59  Aligned_cols=96  Identities=24%  Similarity=0.325  Sum_probs=60.4

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCE-EEcCCCCCccHHHHHHHHcCCCcc
Q 018072          193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FVNTSEHDRPIQEVIAEMTNGGVD  267 (361)
Q Consensus       193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~-vv~~~~~~~~~~~~i~~~~~~g~D  267 (361)
                      .++|++||=+|+|. |.+++..++ +|+++|+++|.++...+.+++    .|... +......+         ...+.||
T Consensus       159 ~~~g~~vLDvG~GS-GILaiaA~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~~---------~~~~~~d  227 (295)
T PF06325_consen  159 VKPGKRVLDVGCGS-GILAIAAAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSED---------LVEGKFD  227 (295)
T ss_dssp             SSTTSEEEEES-TT-SHHHHHHHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTSC---------TCCS-EE
T ss_pred             ccCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEecc---------cccccCC
Confidence            57889999998754 555555444 588899999999987766654    34332 21111111         1125899


Q ss_pred             EEEEccCChHH---HHHHHHHhcCCCcEEEEEcCCC
Q 018072          268 RSVECTGNIDN---MISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       268 vvid~~g~~~~---~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      +|+-+.-.+-.   .....+.++++ |.+++.|...
T Consensus       228 lvvANI~~~vL~~l~~~~~~~l~~~-G~lIlSGIl~  262 (295)
T PF06325_consen  228 LVVANILADVLLELAPDIASLLKPG-GYLILSGILE  262 (295)
T ss_dssp             EEEEES-HHHHHHHHHHCHHHEEEE-EEEEEEEEEG
T ss_pred             EEEECCCHHHHHHHHHHHHHhhCCC-CEEEEccccH
Confidence            99977655322   33455678887 9999999766

Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....

>PLN02780 ketoreductase/ oxidoreductase

Probab=96.44  E-value=0.023  Score=53.36  Aligned_cols=81  Identities=20%  Similarity=0.211  Sum_probs=53.3

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-----cC-CC---EEEcCCCCCccHHHHHHHHcC
Q 018072          194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FG-VT---DFVNTSEHDRPIQEVIAEMTN  263 (361)
Q Consensus       194 ~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-----~G-~~---~vv~~~~~~~~~~~~i~~~~~  263 (361)
                      +.|.+++|+|+ +++|...+..+...|+ +|+.+++++++++.+.+     .+ ..   ...|..+...+..+.+.+..+
T Consensus        51 ~~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~  129 (320)
T PLN02780         51 KYGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIE  129 (320)
T ss_pred             ccCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhc
Confidence            35899999998 8999998887777898 89999999988765432     22 11   123443221123334444434


Q ss_pred             C-CccEEEEccCC
Q 018072          264 G-GVDRSVECTGN  275 (361)
Q Consensus       264 ~-g~Dvvid~~g~  275 (361)
                      + .+|++++++|.
T Consensus       130 ~~didilVnnAG~  142 (320)
T PLN02780        130 GLDVGVLINNVGV  142 (320)
T ss_pred             CCCccEEEEecCc
Confidence            3 56799998873

>PRK08267 short chain dehydrogenase; Provisional

Probab=96.42  E-value=0.063  Score=48.40  Aligned_cols=77  Identities=17%  Similarity=0.211  Sum_probs=52.2

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cC-CC-E--EEcCCCCCccHHHHHHHHc---CCCcc
Q 018072          197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FG-VT-D--FVNTSEHDRPIQEVIAEMT---NGGVD  267 (361)
Q Consensus       197 ~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G-~~-~--vv~~~~~~~~~~~~i~~~~---~~g~D  267 (361)
                      .++||+|+ |++|...++.+...|+ +|+.++++.++++.+.+ ++ .. +  ..|..+.+ ++.+.+....   .+++|
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~~~~~id   79 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTDRA-AWDAALADFAAATGGRLD   79 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHH-HHHHHHHHHHHHcCCCCC
Confidence            47899988 9999999998888898 89999999888776643 32 11 1  23333322 2333333321   34789


Q ss_pred             EEEEccCC
Q 018072          268 RSVECTGN  275 (361)
Q Consensus       268 vvid~~g~  275 (361)
                      ++++++|.
T Consensus        80 ~vi~~ag~   87 (260)
T PRK08267         80 VLFNNAGI   87 (260)
T ss_pred             EEEECCCC
Confidence            99999875

>CHL00194 ycf39 Ycf39; Provisional

Probab=96.41  E-value=0.049  Score=50.90  Aligned_cols=96  Identities=15%  Similarity=0.156  Sum_probs=60.6

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 018072          198 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  276 (361)
Q Consensus       198 ~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~  276 (361)
                      +|+|+|+ |.+|...+..+...|. +|+++.++.++...+...+++.+. -+-.+  . +.+.... .++|+||++++..
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~-~Dl~d--~-~~l~~al-~g~d~Vi~~~~~~   75 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVY-GDLSL--P-ETLPPSF-KGVTAIIDASTSR   75 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEE-CCCCC--H-HHHHHHH-CCCCEEEECCCCC
Confidence            6999998 9999999998888898 899998987776655555654432 11111  1 1222222 2689999987531


Q ss_pred             H------------HHHHHHHHhcCCC-cEEEEEcCC
Q 018072          277 D------------NMISAFECVHDGW-GVAVLVGVP  299 (361)
Q Consensus       277 ~------------~~~~~~~~l~~~~-G~iv~~g~~  299 (361)
                      .            .....++.++..+ .+++.++..
T Consensus        76 ~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~  111 (317)
T CHL00194         76 PSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL  111 (317)
T ss_pred             CCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence            1            1123444454441 378887763

>PRK07831 short chain dehydrogenase; Provisional

Probab=96.40  E-value=0.019  Score=51.91  Aligned_cols=81  Identities=26%  Similarity=0.372  Sum_probs=53.6

Q ss_pred             CCCCCEEEEEcC-C-HHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-----cCCCEE--E--cCCCCCccHHHHHHHH
Q 018072          193 PERGSSVAVFGL-G-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVTDF--V--NTSEHDRPIQEVIAEM  261 (361)
Q Consensus       193 ~~~g~~VlI~G~-g-~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-----~G~~~v--v--~~~~~~~~~~~~i~~~  261 (361)
                      +..+.+++|+|+ | ++|.+.++.+...|+ +|+++++++++++...+     ++...+  +  |..+.+ .+.+.+...
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~   91 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEA-QVDALIDAA   91 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHH-HHHHHHHHH
Confidence            445789999987 6 899999999999998 79999888876655432     443322  2  222221 233333332


Q ss_pred             cC--CCccEEEEccCC
Q 018072          262 TN--GGVDRSVECTGN  275 (361)
Q Consensus       262 ~~--~g~Dvvid~~g~  275 (361)
                      ..  +++|++|+++|.
T Consensus        92 ~~~~g~id~li~~ag~  107 (262)
T PRK07831         92 VERLGRLDVLVNNAGL  107 (262)
T ss_pred             HHHcCCCCEEEECCCC
Confidence            21  378999999984

>PRK12829 short chain dehydrogenase; Provisional

Probab=96.40  E-value=0.016  Score=52.27  Aligned_cols=84  Identities=27%  Similarity=0.277  Sum_probs=54.2

Q ss_pred             CCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc-CCC--EEEcCCCCC-ccHHHHHHHHcC--C
Q 018072          192 KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GVT--DFVNTSEHD-RPIQEVIAEMTN--G  264 (361)
Q Consensus       192 ~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~-G~~--~vv~~~~~~-~~~~~~i~~~~~--~  264 (361)
                      ..-++.++||+|+ |.+|...+..+...|. +|+.++++++..+.+.+. .-.  ..+..+-.+ ..+.+.+.+..+  +
T Consensus         7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   85 (264)
T PRK12829          7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFG   85 (264)
T ss_pred             hccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            3357789999998 9999999999888898 799999988766655432 211  122222222 123233332221  3


Q ss_pred             CccEEEEccCCh
Q 018072          265 GVDRSVECTGNI  276 (361)
Q Consensus       265 g~Dvvid~~g~~  276 (361)
                      ++|+||+++|..
T Consensus        86 ~~d~vi~~ag~~   97 (264)
T PRK12829         86 GLDVLVNNAGIA   97 (264)
T ss_pred             CCCEEEECCCCC
Confidence            799999998753

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.39  E-value=0.038  Score=50.95  Aligned_cols=43  Identities=23%  Similarity=0.245  Sum_probs=38.2

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK  237 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~  237 (361)
                      .+.+|+|+|+|++|.+++..+...|+.+|+.++++.+|.+.+.
T Consensus       126 ~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la  168 (284)
T PRK12549        126 SLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALA  168 (284)
T ss_pred             cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence            4679999999999999999999999989999999988877654

>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=96.38  E-value=0.017  Score=59.57  Aligned_cols=76  Identities=28%  Similarity=0.336  Sum_probs=57.3

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChh---------------------hHHHHHHcCCCEEEcCCCC-Cc
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK---------------------RFEEAKKFGVTDFVNTSEH-DR  252 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~---------------------~~~~~~~~G~~~vv~~~~~-~~  252 (361)
                      .+++|+|+|+|+.|+.++..++..|. .|+++++.+.                     ..++++++|++..++.... +.
T Consensus       309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~  387 (639)
T PRK12809        309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI  387 (639)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence            48999999999999999999999999 7988887763                     4667788998876665432 11


Q ss_pred             cHHHHHHHHcCCCccEEEEccCCh
Q 018072          253 PIQEVIAEMTNGGVDRSVECTGNI  276 (361)
Q Consensus       253 ~~~~~i~~~~~~g~Dvvid~~g~~  276 (361)
                      ++.    .+. .++|.||.++|..
T Consensus       388 ~~~----~l~-~~~DaV~latGa~  406 (639)
T PRK12809        388 TFS----DLT-SEYDAVFIGVGTY  406 (639)
T ss_pred             CHH----HHH-hcCCEEEEeCCCC
Confidence            222    221 2699999999863

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=96.38  E-value=0.021  Score=51.71  Aligned_cols=80  Identities=23%  Similarity=0.317  Sum_probs=53.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCC-EEEcCCCCC-ccHHHHHHHHcC--CCccE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVT-DFVNTSEHD-RPIQEVIAEMTN--GGVDR  268 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~-~vv~~~~~~-~~~~~~i~~~~~--~g~Dv  268 (361)
                      ++.++||+|+ +++|...++.+...|+ +|+.+++++++.+.+.+ ++.. ..+..+-.+ ..+.+.+.+...  +.+|+
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   83 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC   83 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            4678999988 8999999998888998 89999999887766644 3322 122222122 123333333322  36899


Q ss_pred             EEEccCC
Q 018072          269 SVECTGN  275 (361)
Q Consensus       269 vid~~g~  275 (361)
                      +|+++|.
T Consensus        84 li~~ag~   90 (263)
T PRK06200         84 FVGNAGI   90 (263)
T ss_pred             EEECCCC
Confidence            9999873

>PRK07825 short chain dehydrogenase; Provisional

Probab=96.36  E-value=0.023  Score=51.74  Aligned_cols=78  Identities=23%  Similarity=0.315  Sum_probs=52.4

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCCEE--EcCCCCCccHHHHHHHHcC--CCccEE
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDF--VNTSEHDRPIQEVIAEMTN--GGVDRS  269 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~~~v--v~~~~~~~~~~~~i~~~~~--~g~Dvv  269 (361)
                      +.++||+|+ |++|...++.+...|+ +|+.+++++++++.+. .++....  .|..+.+ ++.+.+.....  +++|++
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~l   82 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTDPA-SFAAFLDAVEADLGPIDVL   82 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCCHH-HHHHHHHHHHHHcCCCCEE
Confidence            578999998 9999999998888898 8999989988876543 3442222  2333322 23333333322  378999


Q ss_pred             EEccCC
Q 018072          270 VECTGN  275 (361)
Q Consensus       270 id~~g~  275 (361)
                      |+++|.
T Consensus        83 i~~ag~   88 (273)
T PRK07825         83 VNNAGV   88 (273)
T ss_pred             EECCCc
Confidence            999873

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.36  E-value=0.066  Score=48.98  Aligned_cols=103  Identities=14%  Similarity=0.227  Sum_probs=65.4

Q ss_pred             CCCEEEEEcC---CHHHHHHHHHHHHcCCCeEEEEcCChh---hHHHH-HHcCCCEE--EcCCCCCccHHHHHHHHcC--
Q 018072          195 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSSK---RFEEA-KKFGVTDF--VNTSEHDRPIQEVIAEMTN--  263 (361)
Q Consensus       195 ~g~~VlI~G~---g~vG~~a~~~a~~~g~~~Vi~~~~~~~---~~~~~-~~~G~~~v--v~~~~~~~~~~~~i~~~~~--  263 (361)
                      .+.++||+|+   +++|.+.++.+...|+ +|+.++++++   +++.+ ++++....  .|..+.+ .+.+.+.....  
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~i~~~~   81 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPE-HFKSLAESLKKDL   81 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHH-HHHHHHHHHHHHc
Confidence            3678999986   4899999998888999 8888888752   33333 34554332  3333322 24444444332  


Q ss_pred             CCccEEEEccCCh--------------H---------------HHHHHHHHhcCCCcEEEEEcCCC
Q 018072          264 GGVDRSVECTGNI--------------D---------------NMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       264 ~g~Dvvid~~g~~--------------~---------------~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      +.+|++++++|..              +               .....++.|..+ |+++.++...
T Consensus        82 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~-g~Iv~isS~~  146 (274)
T PRK08415         82 GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG-ASVLTLSYLG  146 (274)
T ss_pred             CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC-CcEEEEecCC
Confidence            3799999998841              1               124555667776 9999887544

>PRK06841 short chain dehydrogenase; Provisional

Probab=96.36  E-value=0.018  Score=51.74  Aligned_cols=80  Identities=26%  Similarity=0.287  Sum_probs=52.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCE--EEcCCCCC-ccHHHHHHHHcC--CCccE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--FVNTSEHD-RPIQEVIAEMTN--GGVDR  268 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~--vv~~~~~~-~~~~~~i~~~~~--~g~Dv  268 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+.++++++..+...++....  .+..+-.+ .++.+.+.+..+  +++|+
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   92 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI   92 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4679999998 9999999988888898 8999999887665555543221  22222222 123333333222  36899


Q ss_pred             EEEccCC
Q 018072          269 SVECTGN  275 (361)
Q Consensus       269 vid~~g~  275 (361)
                      +|+++|.
T Consensus        93 vi~~ag~   99 (255)
T PRK06841         93 LVNSAGV   99 (255)
T ss_pred             EEECCCC
Confidence            9999874

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=96.36  E-value=0.028  Score=49.67  Aligned_cols=95  Identities=25%  Similarity=0.310  Sum_probs=63.2

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCE--EEcCCCCCccHHHHHHHHcCCCccEEEE
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--FVNTSEHDRPIQEVIAEMTNGGVDRSVE  271 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~--vv~~~~~~~~~~~~i~~~~~~g~Dvvid  271 (361)
                      -+|.+||=+|+|+ |+++.-+|+ +|+ +|+++|.+++..+.++......  -++|....   .+.+... ++.||+|+.
T Consensus        58 l~g~~vLDvGCGg-G~Lse~mAr-~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~~~---~edl~~~-~~~FDvV~c  130 (243)
T COG2227          58 LPGLRVLDVGCGG-GILSEPLAR-LGA-SVTGIDASEKPIEVAKLHALESGVNIDYRQAT---VEDLASA-GGQFDVVTC  130 (243)
T ss_pred             CCCCeEEEecCCc-cHhhHHHHH-CCC-eeEEecCChHHHHHHHHhhhhccccccchhhh---HHHHHhc-CCCccEEEE
Confidence            4788999999965 666665554 577 9999999999999987533322  14454432   2222221 148999986


Q ss_pred             -----ccCChH-HHHHHHHHhcCCCcEEEEE
Q 018072          272 -----CTGNID-NMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       272 -----~~g~~~-~~~~~~~~l~~~~G~iv~~  296 (361)
                           -+..++ .+..+.+.++|+ |.+.+-
T Consensus       131 mEVlEHv~dp~~~~~~c~~lvkP~-G~lf~S  160 (243)
T COG2227         131 MEVLEHVPDPESFLRACAKLVKPG-GILFLS  160 (243)
T ss_pred             hhHHHccCCHHHHHHHHHHHcCCC-cEEEEe
Confidence                 455555 466788889997 876654

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.33  E-value=0.039  Score=46.57  Aligned_cols=79  Identities=22%  Similarity=0.223  Sum_probs=56.3

Q ss_pred             CCCCCCEEEEEcCCH-HHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEE
Q 018072          192 KPERGSSVAVFGLGA-VGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV  270 (361)
Q Consensus       192 ~~~~g~~VlI~G~g~-vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvi  270 (361)
                      .--.|.+|+|+|+|. +|..++..+...|+ +|+.+.++.+.                     ..+.+     ..+|+||
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~~~---------------------l~~~l-----~~aDiVI   92 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKTKN---------------------LKEHT-----KQADIVI   92 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCchh---------------------HHHHH-----hhCCEEE
Confidence            345789999999986 59989999999998 78888765311                     22222     1489999


Q ss_pred             EccCChHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072          271 ECTGNIDNMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       271 d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      .+++.+..+..  +.++++ -.++.++.+.
T Consensus        93 sat~~~~ii~~--~~~~~~-~viIDla~pr  119 (168)
T cd01080          93 VAVGKPGLVKG--DMVKPG-AVVIDVGINR  119 (168)
T ss_pred             EcCCCCceecH--HHccCC-eEEEEccCCC
Confidence            99999775443  346665 6777887765

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]

Probab=96.33  E-value=0.035  Score=49.40  Aligned_cols=104  Identities=23%  Similarity=0.277  Sum_probs=73.9

Q ss_pred             hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHc
Q 018072          188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT  262 (361)
Q Consensus       188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~  262 (361)
                      ....++.||++|+=.|.|. |.+++-+|++.|. .+|+..+..++..+.|++    +|....+.....|  +.+.+   .
T Consensus        87 ~~~~gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~D--v~~~~---~  160 (256)
T COG2519          87 VARLGISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLGD--VREGI---D  160 (256)
T ss_pred             HHHcCCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEecc--ccccc---c
Confidence            4678999999999988765 8888889988875 699999999998888854    4554423222222  22211   1


Q ss_pred             CCCccEEE-EccCChHHHHHHHHHhcCCCcEEEEEcC
Q 018072          263 NGGVDRSV-ECTGNIDNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       263 ~~g~Dvvi-d~~g~~~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      +..+|+|| |....-+.++.+.+.|+++ |.++.+..
T Consensus       161 ~~~vDav~LDmp~PW~~le~~~~~Lkpg-g~~~~y~P  196 (256)
T COG2519         161 EEDVDAVFLDLPDPWNVLEHVSDALKPG-GVVVVYSP  196 (256)
T ss_pred             ccccCEEEEcCCChHHHHHHHHHHhCCC-cEEEEEcC
Confidence            12687765 4444445789999999998 99988853

>PRK07832 short chain dehydrogenase; Provisional

Probab=96.31  E-value=0.048  Score=49.60  Aligned_cols=76  Identities=22%  Similarity=0.336  Sum_probs=49.2

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCE----EEcCCCCCccHHHHHHHHcC--CCc
Q 018072          198 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD----FVNTSEHDRPIQEVIAEMTN--GGV  266 (361)
Q Consensus       198 ~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~----vv~~~~~~~~~~~~i~~~~~--~g~  266 (361)
                      +++|+|+ |++|...++.+...|+ +|+.+++++++++.+    +..+...    ..|..+.+ .+.+.+.+...  +++
T Consensus         2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~i   79 (272)
T PRK07832          2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYD-AVAAFAADIHAAHGSM   79 (272)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHH-HHHHHHHHHHHhcCCC
Confidence            6899988 9999999998888898 788888887765443    2234332    23333322 12222332221  368


Q ss_pred             cEEEEccCC
Q 018072          267 DRSVECTGN  275 (361)
Q Consensus       267 Dvvid~~g~  275 (361)
                      |++|++.|.
T Consensus        80 d~lv~~ag~   88 (272)
T PRK07832         80 DVVMNIAGI   88 (272)
T ss_pred             CEEEECCCC
Confidence            999999974

>PRK07402 precorrin-6B methylase; Provisional

Probab=96.31  E-value=0.069  Score=46.21  Aligned_cols=105  Identities=20%  Similarity=0.336  Sum_probs=63.8

Q ss_pred             hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcC
Q 018072          188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN  263 (361)
Q Consensus       188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~  263 (361)
                      ....+++++++||=+|+|. |..++.+++.....+|+++|.+++..+.+++    ++...+... ..+  ..+.+..+. 
T Consensus        33 ~~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~-~~d--~~~~~~~~~-  107 (196)
T PRK07402         33 ISQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVI-EGS--APECLAQLA-  107 (196)
T ss_pred             HHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEE-ECc--hHHHHhhCC-
Confidence            4455778899988888754 5556666665533499999999988877754    555432111 111  222222222 


Q ss_pred             CCccE-EEEccCC-hHHHHHHHHHhcCCCcEEEEEcC
Q 018072          264 GGVDR-SVECTGN-IDNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       264 ~g~Dv-vid~~g~-~~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      ..+|. .++.... ...++.+.+.|+++ |+++....
T Consensus       108 ~~~d~v~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~  143 (196)
T PRK07402        108 PAPDRVCIEGGRPIKEILQAVWQYLKPG-GRLVATAS  143 (196)
T ss_pred             CCCCEEEEECCcCHHHHHHHHHHhcCCC-eEEEEEee
Confidence            22344 4443222 35678889999997 99887753

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.30  E-value=0.018  Score=55.89  Aligned_cols=77  Identities=10%  Similarity=0.181  Sum_probs=55.3

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEc
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  272 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~  272 (361)
                      -.+.+|+|+|+|.+|.+++..+...|...++++.++.+|.+.+. +++...++.       +. .+.... ..+|+||+|
T Consensus       179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~-------~~-~l~~~l-~~aDiVI~a  249 (414)
T PRK13940        179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHY-------LS-ELPQLI-KKADIIIAA  249 (414)
T ss_pred             ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEec-------HH-HHHHHh-ccCCEEEEC
Confidence            46789999999999999999999999878999999988765554 455222221       22 222211 258999999


Q ss_pred             cCChHHH
Q 018072          273 TGNIDNM  279 (361)
Q Consensus       273 ~g~~~~~  279 (361)
                      ++.+..+
T Consensus       250 T~a~~~v  256 (414)
T PRK13940        250 VNVLEYI  256 (414)
T ss_pred             cCCCCee
Confidence            9987653

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=96.29  E-value=0.029  Score=46.41  Aligned_cols=97  Identities=22%  Similarity=0.250  Sum_probs=61.8

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCCCE-EEcCCCCCccHHHHHHHHcCCCccEEEE
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVE  271 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~-~~~G~~~-vv~~~~~~~~~~~~i~~~~~~g~Dvvid  271 (361)
                      ..+.+++|+|+|.+|...++.+...|...|+++++++++.+.+ ++++... .....  +  ..+.     -+++|+|+.
T Consensus        17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~--~--~~~~-----~~~~Dvvi~   87 (155)
T cd01065          17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYL--D--LEEL-----LAEADLIIN   87 (155)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeec--c--hhhc-----cccCCEEEe
Confidence            4568999999999999999988888644899999998876654 4455421 01111  1  1111     136899999


Q ss_pred             ccCChHH----HHHHHHHhcCCCcEEEEEcCCC
Q 018072          272 CTGNIDN----MISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       272 ~~g~~~~----~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      +++....    .......++++ ..++.++..+
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~-~~v~D~~~~~  119 (155)
T cd01065          88 TTPVGMKPGDELPLPPSLLKPG-GVVYDVVYNP  119 (155)
T ss_pred             CcCCCCCCCCCCCCCHHHcCCC-CEEEEcCcCC
Confidence            9987432    11223445665 6666676543

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK08339 short chain dehydrogenase; Provisional

Probab=96.28  E-value=0.029  Score=50.95  Aligned_cols=79  Identities=20%  Similarity=0.339  Sum_probs=52.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-c----CCCE-E--EcCCCCCccHHHHHHHHcC-C
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F----GVTD-F--VNTSEHDRPIQEVIAEMTN-G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~----G~~~-v--v~~~~~~~~~~~~i~~~~~-~  264 (361)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+.+ +    +... .  .|..+.+ ++.+.+..... +
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~i~~~~~~~~~~g   84 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKRE-DLERTVKELKNIG   84 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHH-HHHHHHHHHHhhC
Confidence            4778999988 8999999999989998 89999999877655432 1    3221 2  2333221 23333333321 3


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      ++|++++++|.
T Consensus        85 ~iD~lv~nag~   95 (263)
T PRK08339         85 EPDIFFFSTGG   95 (263)
T ss_pred             CCcEEEECCCC
Confidence            78999999874

>PRK09186 flagellin modification protein A; Provisional

Probab=96.28  E-value=0.066  Score=47.99  Aligned_cols=78  Identities=19%  Similarity=0.423  Sum_probs=51.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-Hc----CCCE----EEcCCCCCccHHHHHHHHcC-
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF----GVTD----FVNTSEHDRPIQEVIAEMTN-  263 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~----G~~~----vv~~~~~~~~~~~~i~~~~~-  263 (361)
                      .+.++||+|+ |++|...+..+...|+ +|+.+.+++++.+.+. ++    +...    ..|..+.+ .+.+.+..... 
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~-~~~~~~~~~~~~   80 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQE-SLEEFLSKSAEK   80 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHH-HHHHHHHHHHHH
Confidence            4678999998 8999999998888898 8999988887765442 22    2221    22333322 23334443322 


Q ss_pred             -CCccEEEEccC
Q 018072          264 -GGVDRSVECTG  274 (361)
Q Consensus       264 -~g~Dvvid~~g  274 (361)
                       +++|++|++.+
T Consensus        81 ~~~id~vi~~A~   92 (256)
T PRK09186         81 YGKIDGAVNCAY   92 (256)
T ss_pred             cCCccEEEECCc
Confidence             36899999985

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.27  E-value=0.011  Score=58.05  Aligned_cols=95  Identities=11%  Similarity=0.110  Sum_probs=64.8

Q ss_pred             hhhcCCCCCCEEE----EEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC-EEEcCCCCCccHHHHHHHH
Q 018072          188 LNVAKPERGSSVA----VFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEM  261 (361)
Q Consensus       188 ~~~~~~~~g~~Vl----I~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~-~vv~~~~~~~~~~~~i~~~  261 (361)
                      ....+.++|+.+|    |+|+ |++|.+++|+++..|+ .|+++...+.+....+..+.+ .+++.....  ..+.+...
T Consensus        26 ~~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~l~~~  102 (450)
T PRK08261         26 VPLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGY-DVVANNDGGLTWAAGWGDRFGALVFDATGIT--DPADLKAL  102 (450)
T ss_pred             ccccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCC-eeeecCccccccccCcCCcccEEEEECCCCC--CHHHHHHH
Confidence            3457788999888    8865 9999999999999999 899886666644333334444 344443322  33333322


Q ss_pred             cCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072          262 TNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       262 ~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      .              ..+..+++.|.++ |+++.++...
T Consensus       103 ~--------------~~~~~~l~~l~~~-griv~i~s~~  126 (450)
T PRK08261        103 Y--------------EFFHPVLRSLAPC-GRVVVLGRPP  126 (450)
T ss_pred             H--------------HHHHHHHHhccCC-CEEEEEcccc
Confidence            1              3556778888887 9999998655

>PRK06180 short chain dehydrogenase; Provisional

Probab=96.27  E-value=0.025  Score=51.71  Aligned_cols=79  Identities=24%  Similarity=0.334  Sum_probs=53.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC-E-EE--cCCCCCccHHHHHHHHcC--CCcc
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-D-FV--NTSEHDRPIQEVIAEMTN--GGVD  267 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~-~-vv--~~~~~~~~~~~~i~~~~~--~g~D  267 (361)
                      .+.++||+|+ |++|...++.+...|. +|+++++++++++.+.+.... . .+  |..+.+ .+.+.+.....  +++|
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~-~~~~~~~~~~~~~~~~d   80 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTDFD-AIDAVVADAEATFGPID   80 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHH-HHHHHHHHHHHHhCCCC
Confidence            3568999998 9999999998888898 899999998887766553222 1 22  222221 23333333222  3689


Q ss_pred             EEEEccCC
Q 018072          268 RSVECTGN  275 (361)
Q Consensus       268 vvid~~g~  275 (361)
                      ++++++|.
T Consensus        81 ~vv~~ag~   88 (277)
T PRK06180         81 VLVNNAGY   88 (277)
T ss_pred             EEEECCCc
Confidence            99999885

>PRK05867 short chain dehydrogenase; Provisional

Probab=96.25  E-value=0.023  Score=51.08  Aligned_cols=79  Identities=23%  Similarity=0.311  Sum_probs=52.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCE-E--EcCCCCCccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-F--VNTSEHDRPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~-v--v~~~~~~~~~~~~i~~~~~--~  264 (361)
                      .|.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.+    .+... .  .|..+. ..+.+.+.....  +
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g   85 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQH-QQVTSMLDQVTAELG   85 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCH-HHHHHHHHHHHHHhC
Confidence            4789999998 8999999999888999 89999998877655432    23221 2  222222 123333333322  3


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      ++|+++++.|.
T Consensus        86 ~id~lv~~ag~   96 (253)
T PRK05867         86 GIDIAVCNAGI   96 (253)
T ss_pred             CCCEEEECCCC
Confidence            78999998873

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.25  E-value=0.09  Score=47.84  Aligned_cols=103  Identities=17%  Similarity=0.203  Sum_probs=61.2

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh-------------------hhH----HHHHHcCCCE-EEcCCCC
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-------------------KRF----EEAKKFGVTD-FVNTSEH  250 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~-------------------~~~----~~~~~~G~~~-vv~~~~~  250 (361)
                      ...+|+|+|+|++|..++..+...|..+++.+|.+.                   .|.    +.+.+++... +..+...
T Consensus        29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~~~  108 (268)
T PRK15116         29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDF  108 (268)
T ss_pred             cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEecc
Confidence            456899999999999999999999988898887652                   111    2223344332 2222111


Q ss_pred             CccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCC
Q 018072          251 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP  299 (361)
Q Consensus       251 ~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~  299 (361)
                      -  ..+.+..+...++|+||||..+...-....+.+...+=.++..|..
T Consensus       109 i--~~e~~~~ll~~~~D~VIdaiD~~~~k~~L~~~c~~~~ip~I~~gGa  155 (268)
T PRK15116        109 I--TPDNVAEYMSAGFSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGA  155 (268)
T ss_pred             c--ChhhHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHcCCCEEEECCc
Confidence            0  0122333333479999999998555444445544441345555443

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=96.23  E-value=0.041  Score=51.29  Aligned_cols=91  Identities=26%  Similarity=0.421  Sum_probs=61.7

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 018072          197 SSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  275 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~  275 (361)
                      .+|.|+|+|.+|...+..++..|. .+|+++++++++.+.+++.|....+.   .+  ..+.+     ...|+||.|+..
T Consensus         7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~---~~--~~~~~-----~~aDvViiavp~   76 (307)
T PRK07502          7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT---TS--AAEAV-----KGADLVILCVPV   76 (307)
T ss_pred             cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec---CC--HHHHh-----cCCCEEEECCCH
Confidence            579999999999999998888874 47999999999999888887532111   11  11111     258999999986


Q ss_pred             hHH---HHHHHHHhcCCCcEEEEEcC
Q 018072          276 IDN---MISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       276 ~~~---~~~~~~~l~~~~G~iv~~g~  298 (361)
                      ...   ++.....++++ ..++.+|.
T Consensus        77 ~~~~~v~~~l~~~l~~~-~iv~dvgs  101 (307)
T PRK07502         77 GASGAVAAEIAPHLKPG-AIVTDVGS  101 (307)
T ss_pred             HHHHHHHHHHHhhCCCC-CEEEeCcc
Confidence            332   22333445565 66666654

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=96.22  E-value=0.076  Score=47.75  Aligned_cols=80  Identities=23%  Similarity=0.244  Sum_probs=51.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCEE-EcCCCCC-ccHHHHHHHHc--CCC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF-VNTSEHD-RPIQEVIAEMT--NGG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~v-v~~~~~~-~~~~~~i~~~~--~~g  265 (361)
                      .+.++||+|+ |.+|...++.+...|. +|+.+++++++.+.+    ++.+.... +..+-.+ ..+.+.+....  .++
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   84 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGS   84 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            3679999998 9999999998888999 888998988655443    33454332 2112122 11222322221  136


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++|.++|.
T Consensus        85 ~d~vi~~ag~   94 (262)
T PRK13394         85 VDILVSNAGI   94 (262)
T ss_pred             CCEEEECCcc
Confidence            8999999874

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=96.21  E-value=0.035  Score=50.79  Aligned_cols=69  Identities=23%  Similarity=0.153  Sum_probs=50.4

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCEEEcCCCCCccHHHHHHHHcCCCccEEE
Q 018072          192 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV  270 (361)
Q Consensus       192 ~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvi  270 (361)
                      +...+.+++|+|+|+.+.+++..+...|+.+|+++.|+.+|.+.+.+ ++..           +.+.+   ....+|+||
T Consensus       118 ~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~-----------~~~~~---~~~~~dlvI  183 (272)
T PRK12550        118 QVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE-----------WRPDL---GGIEADILV  183 (272)
T ss_pred             CCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc-----------chhhc---ccccCCEEE
Confidence            34456789999999999999999999998889999999988776643 4311           11011   112589999


Q ss_pred             EccC
Q 018072          271 ECTG  274 (361)
Q Consensus       271 d~~g  274 (361)
                      +|+.
T Consensus       184 NaTp  187 (272)
T PRK12550        184 NVTP  187 (272)
T ss_pred             ECCc
Confidence            9975

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.20  E-value=0.029  Score=50.13  Aligned_cols=79  Identities=20%  Similarity=0.320  Sum_probs=52.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHD-RPIQEVIAEMTN--GG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g  265 (361)
                      ++.++||+|+ |++|...++.+...|. +|+.+++++++.+.+.    ..+... .+..+-.+ ..+.+.+.....  ++
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ   82 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4779999998 9999999999988998 8999999887655442    234432 22222122 123333333322  36


Q ss_pred             ccEEEEccC
Q 018072          266 VDRSVECTG  274 (361)
Q Consensus       266 ~Dvvid~~g  274 (361)
                      +|++|+++|
T Consensus        83 id~vi~~ag   91 (253)
T PRK08217         83 LNGLINNAG   91 (253)
T ss_pred             CCEEEECCC
Confidence            899999987

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=96.20  E-value=0.053  Score=48.60  Aligned_cols=80  Identities=28%  Similarity=0.305  Sum_probs=51.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHD-RPIQEVIAEMTN--GG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g  265 (361)
                      .+.++||+|+ |.+|...++.+...|. +|+++++++++.+.+.    +.+... .+..+-.+ .++.+.+.....  ++
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG   81 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            3578999987 9999999998888898 8999999887665442    223322 22222222 123333333221  36


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++|.+++.
T Consensus        82 ~d~vi~~a~~   91 (258)
T PRK12429         82 VDILVNNAGI   91 (258)
T ss_pred             CCEEEECCCC
Confidence            8999998873

>PLN02781 Probable caffeoyl-CoA O-methyltransferase

Probab=96.19  E-value=0.046  Score=48.89  Aligned_cols=105  Identities=15%  Similarity=0.169  Sum_probs=69.1

Q ss_pred             hhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHc-
Q 018072          189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT-  262 (361)
Q Consensus       189 ~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g-~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~-  262 (361)
                      ...+..++.+||=+|.|. |..++.+++.++ ..+|+.++.+++..+.+++    .|...-+.....+  ..+.+..+. 
T Consensus        62 ~l~~~~~~~~vLEiGt~~-G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~gd--a~~~L~~l~~  138 (234)
T PLN02781         62 MLVKIMNAKNTLEIGVFT-GYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQSD--ALSALDQLLN  138 (234)
T ss_pred             HHHHHhCCCEEEEecCcc-cHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcc--HHHHHHHHHh
Confidence            345667788999998743 555566666653 3499999999998887754    5654333333333  444454442 


Q ss_pred             ---CCCccEEEEccCC---hHHHHHHHHHhcCCCcEEEEEc
Q 018072          263 ---NGGVDRSVECTGN---IDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       263 ---~~g~Dvvid~~g~---~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                         .+.||+||--...   ...++.+++.++++ |.++.-.
T Consensus       139 ~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~G-G~ii~dn  178 (234)
T PLN02781        139 NDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVG-GIIAFDN  178 (234)
T ss_pred             CCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-eEEEEEc
Confidence               2379999976532   34677889999997 9877543

>PRK05866 short chain dehydrogenase; Provisional

Probab=96.19  E-value=0.036  Score=51.22  Aligned_cols=80  Identities=25%  Similarity=0.390  Sum_probs=52.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCE-EEcCCCCC-ccHHHHHHHHc--CCC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FVNTSEHD-RPIQEVIAEMT--NGG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~-vv~~~~~~-~~~~~~i~~~~--~~g  265 (361)
                      .+.+++|+|+ |++|...++.+...|. +|+++++++++++.+.+    .+... .+..+-.+ .++.+.+....  -++
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  117 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGG  117 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            3578999988 9999999998888898 89999999877655432    33322 22222222 12333333322  137


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++++++|.
T Consensus       118 id~li~~AG~  127 (293)
T PRK05866        118 VDILINNAGR  127 (293)
T ss_pred             CCEEEECCCC
Confidence            8999999874

>PRK06196 oxidoreductase; Provisional

Probab=96.19  E-value=0.034  Score=51.91  Aligned_cols=80  Identities=20%  Similarity=0.246  Sum_probs=52.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCCEEEcCCCCC-ccHHHHHHHHcC--CCccEE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDFVNTSEHD-RPIQEVIAEMTN--GGVDRS  269 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~~~vv~~~~~~-~~~~~~i~~~~~--~g~Dvv  269 (361)
                      .+.+++|+|+ |++|...+..+...|+ +|+++++++++.+.+. ++..-..+..+-.+ ..+.+.+.....  +++|++
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l  103 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDIL  103 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEE
Confidence            4678999998 9999999998888898 8999999887765543 22211222222222 123333443332  379999


Q ss_pred             EEccCC
Q 018072          270 VECTGN  275 (361)
Q Consensus       270 id~~g~  275 (361)
                      |+++|.
T Consensus       104 i~nAg~  109 (315)
T PRK06196        104 INNAGV  109 (315)
T ss_pred             EECCCC
Confidence            999873

>PRK07774 short chain dehydrogenase; Provisional

Probab=96.18  E-value=0.03  Score=50.09  Aligned_cols=80  Identities=25%  Similarity=0.274  Sum_probs=50.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCC-EEEcCCCCC-ccHHHHHHHHcC--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHD-RPIQEVIAEMTN--GG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~-~vv~~~~~~-~~~~~~i~~~~~--~g  265 (361)
                      .+.+++|+|+ |.+|...++.+...|. +|+.+++++++.+.+.+    .+.. ..+..+-.+ .++.+.......  ++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGG   83 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            4678999998 9999999998888898 89999998766544322    2222 122222222 112222222211  26


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++|+++|.
T Consensus        84 id~vi~~ag~   93 (250)
T PRK07774         84 IDYLVNNAAI   93 (250)
T ss_pred             CCEEEECCCC
Confidence            8999999883

>PRK06484 short chain dehydrogenase; Validated

Probab=96.18  E-value=0.053  Score=54.31  Aligned_cols=104  Identities=23%  Similarity=0.355  Sum_probs=69.1

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCE---EEcCCCCCccHHHHHHHHcC--CCc
Q 018072          194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD---FVNTSEHDRPIQEVIAEMTN--GGV  266 (361)
Q Consensus       194 ~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~---vv~~~~~~~~~~~~i~~~~~--~g~  266 (361)
                      ..|.++||+|+ +++|...++.+...|+ +|+.+++++++++.+.+ ++...   ..|..+.+ .+.+.+.....  +.+
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g~i  344 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITDEA-AVESAFAQIQARWGRL  344 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHH-HHHHHHHHHHHHcCCC
Confidence            46789999988 8999999998888998 89999999888776654 45432   12332221 23333433322  368


Q ss_pred             cEEEEccCChH-----------H---------------HHHHHHHhcCCCcEEEEEcCCC
Q 018072          267 DRSVECTGNID-----------N---------------MISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       267 Dvvid~~g~~~-----------~---------------~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      |++|+++|...           .               ...++..++.. |+++.++...
T Consensus       345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-g~iv~isS~~  403 (520)
T PRK06484        345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQG-GVIVNLGSIA  403 (520)
T ss_pred             CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccC-CEEEEECchh
Confidence            99999987420           0               23444556666 8999987643

>PRK08263 short chain dehydrogenase; Provisional

Probab=96.18  E-value=0.064  Score=48.90  Aligned_cols=79  Identities=18%  Similarity=0.240  Sum_probs=51.2

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCC-EEEcCCCCC-ccHHHHHHHHcC--CCccEE
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVT-DFVNTSEHD-RPIQEVIAEMTN--GGVDRS  269 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~-~vv~~~~~~-~~~~~~i~~~~~--~g~Dvv  269 (361)
                      +.++||+|+ |++|...++.+...|. +|+.+++++++++.+.+ ++.. ..+..+-.+ ..+.+.+.....  +++|++
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIV   81 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            458999987 9999999988888898 89999999887766544 2222 122222222 123333333221  378999


Q ss_pred             EEccCC
Q 018072          270 VECTGN  275 (361)
Q Consensus       270 id~~g~  275 (361)
                      |+++|.
T Consensus        82 i~~ag~   87 (275)
T PRK08263         82 VNNAGY   87 (275)
T ss_pred             EECCCC
Confidence            999874

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.17  E-value=0.02  Score=52.77  Aligned_cols=75  Identities=13%  Similarity=0.059  Sum_probs=51.2

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCE-EEcCCCCCccHHHHHHHHcCCCccEEEEc
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVEC  272 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~-vv~~~~~~~~~~~~i~~~~~~g~Dvvid~  272 (361)
                      .+.+++|+|+|+.+.+++..+..+|+.+|+++.|+.+|.+.+.+ ++... +.....    . +.+.... ..+|+||+|
T Consensus       124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~----~-~~~~~~~-~~~DiVIna  197 (282)
T TIGR01809       124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEG----D-SGGLAIE-KAAEVLVST  197 (282)
T ss_pred             CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccc----h-hhhhhcc-cCCCEEEEC
Confidence            57899999999999999999999998899999999888766543 33211 111110    0 1111111 268999999


Q ss_pred             cCC
Q 018072          273 TGN  275 (361)
Q Consensus       273 ~g~  275 (361)
                      ++.
T Consensus       198 Tp~  200 (282)
T TIGR01809       198 VPA  200 (282)
T ss_pred             CCC
Confidence            875

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.15  E-value=0.08  Score=46.09  Aligned_cols=82  Identities=28%  Similarity=0.300  Sum_probs=56.8

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEc
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  272 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~  272 (361)
                      -.|.+++|+|.|.+|..+++.+...|+ +|+++++++++.+.+.+ +|+. .++..+           +....+|+++-+
T Consensus        26 l~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~-~v~~~~-----------l~~~~~Dv~vp~   92 (200)
T cd01075          26 LEGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGAT-VVAPEE-----------IYSVDADVFAPC   92 (200)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE-EEcchh-----------hccccCCEEEec
Confidence            357899999999999999999999999 89999999988777654 4643 222211           111157888866


Q ss_pred             cCChHHHHHHHHHhcC
Q 018072          273 TGNIDNMISAFECVHD  288 (361)
Q Consensus       273 ~g~~~~~~~~~~~l~~  288 (361)
                      ......-+..++.|+.
T Consensus        93 A~~~~I~~~~~~~l~~  108 (200)
T cd01075          93 ALGGVINDDTIPQLKA  108 (200)
T ss_pred             ccccccCHHHHHHcCC
Confidence            5543344455566653

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.14  E-value=0.016  Score=53.16  Aligned_cols=45  Identities=36%  Similarity=0.425  Sum_probs=40.6

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK  238 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~  238 (361)
                      .+|++++|+|+|+.+.+++..+...|+.+|+++.|+.+|.+.+.+
T Consensus       124 ~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~  168 (283)
T COG0169         124 VTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELAD  168 (283)
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence            468999999999999999999999998899999999998777755

>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=96.13  E-value=0.023  Score=58.71  Aligned_cols=76  Identities=24%  Similarity=0.296  Sum_probs=54.1

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChh---------------------hHHHHHHcCCCEEEcCCCC-C
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK---------------------RFEEAKKFGVTDFVNTSEH-D  251 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~---------------------~~~~~~~~G~~~vv~~~~~-~  251 (361)
                      ..|.+|+|+|+|+.|+.++..++..|. +|+++++.+.                     ..+.++++|++...+..-. +
T Consensus       325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~  403 (654)
T PRK12769        325 KSDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKD  403 (654)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCc
Confidence            358899999999999999999999999 7998987543                     3556677887655443221 1


Q ss_pred             ccHHHHHHHHcCCCccEEEEccCC
Q 018072          252 RPIQEVIAEMTNGGVDRSVECTGN  275 (361)
Q Consensus       252 ~~~~~~i~~~~~~g~Dvvid~~g~  275 (361)
                      .++.+    +. .+||.||.++|.
T Consensus       404 i~~~~----~~-~~~DavilAtGa  422 (654)
T PRK12769        404 ISLES----LL-EDYDAVFVGVGT  422 (654)
T ss_pred             CCHHH----HH-hcCCEEEEeCCC
Confidence            11211    11 269999999886

>PRK06128 oxidoreductase; Provisional

Probab=96.11  E-value=0.094  Score=48.54  Aligned_cols=103  Identities=17%  Similarity=0.198  Sum_probs=61.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChh--h----HHHHHHcCCCEE-E--cCCCCCccHHHHHHHHcC-
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK--R----FEEAKKFGVTDF-V--NTSEHDRPIQEVIAEMTN-  263 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~--~----~~~~~~~G~~~v-v--~~~~~~~~~~~~i~~~~~-  263 (361)
                      .+.++||+|+ |++|...+..+...|+ +|+.+.++.+  .    .+.+++.|.... +  |..+. ..+.+.+..... 
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~  131 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDE-AFCRQLVERAVKE  131 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCH-HHHHHHHHHHHHH
Confidence            4679999988 9999999998888898 7777655432  1    223334454332 2  22221 123333333222 


Q ss_pred             -CCccEEEEccCCh---H-----------------------HHHHHHHHhcCCCcEEEEEcCCC
Q 018072          264 -GGVDRSVECTGNI---D-----------------------NMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       264 -~g~Dvvid~~g~~---~-----------------------~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                       +++|++|+++|..   .                       ..+.+++.+..+ |+++.++...
T Consensus       132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~iv~~sS~~  194 (300)
T PRK06128        132 LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPG-ASIINTGSIQ  194 (300)
T ss_pred             hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcC-CEEEEECCcc
Confidence             3799999998741   0                       123444455666 8998887543

>PRK09291 short chain dehydrogenase; Provisional

Probab=96.11  E-value=0.039  Score=49.56  Aligned_cols=75  Identities=15%  Similarity=0.117  Sum_probs=49.8

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCE-EEcCCCCCccHHHHHHHHcCCCccEE
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRS  269 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~-vv~~~~~~~~~~~~i~~~~~~g~Dvv  269 (361)
                      +.++||+|+ |++|...++.+...|+ +|+++.+++++.+.+.+    .+... ++..+-.+  . +.+.....+++|++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~-~~~~~~~~~~id~v   77 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTD--A-IDRAQAAEWDVDVL   77 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCC--H-HHHHHHhcCCCCEE
Confidence            457999998 9999999999999998 89999888776555432    33321 22111122  1 23333333489999


Q ss_pred             EEccC
Q 018072          270 VECTG  274 (361)
Q Consensus       270 id~~g  274 (361)
                      |+++|
T Consensus        78 i~~ag   82 (257)
T PRK09291         78 LNNAG   82 (257)
T ss_pred             EECCC
Confidence            99987

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.08  E-value=0.041  Score=50.24  Aligned_cols=80  Identities=15%  Similarity=0.223  Sum_probs=50.2

Q ss_pred             CCCEEEEEcC-C--HHHHHHHHHHHHcCCCeEEEEcCChhhH---HHH-HHcCCCEEEcCCCCC-ccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSKRF---EEA-KKFGVTDFVNTSEHD-RPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g--~vG~~a~~~a~~~g~~~Vi~~~~~~~~~---~~~-~~~G~~~vv~~~~~~-~~~~~~i~~~~~--~  264 (361)
                      .+.++||+|+ +  ++|.+.++.+...|+ +|+.++++++..   +.+ +++|....+..+-.+ .++.+.+.....  +
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g   84 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWG   84 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            4678999998 4  899999998888999 888887765322   222 334543332222222 123333333322  3


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      .+|++++++|.
T Consensus        85 ~iD~lVnnAG~   95 (271)
T PRK06505         85 KLDFVVHAIGF   95 (271)
T ss_pred             CCCEEEECCcc
Confidence            79999999873

>PRK06500 short chain dehydrogenase; Provisional

Probab=96.07  E-value=0.037  Score=49.38  Aligned_cols=79  Identities=19%  Similarity=0.345  Sum_probs=52.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCCCEE-E--cCCCCCccHHHHHHHHcC--CCcc
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDF-V--NTSEHDRPIQEVIAEMTN--GGVD  267 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~-~~~G~~~v-v--~~~~~~~~~~~~i~~~~~--~g~D  267 (361)
                      ++.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+ ++++.... +  |..+.+ +..+.+.....  +++|
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id   82 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGDVA-AQKALAQALAEAFGRLD   82 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCCHH-HHHHHHHHHHHHhCCCC
Confidence            4678999998 9999999999999998 899999987766554 34554322 2  222211 12222222221  3689


Q ss_pred             EEEEccCC
Q 018072          268 RSVECTGN  275 (361)
Q Consensus       268 vvid~~g~  275 (361)
                      ++|+++|.
T Consensus        83 ~vi~~ag~   90 (249)
T PRK06500         83 AVFINAGV   90 (249)
T ss_pred             EEEECCCC
Confidence            99999874

>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]

Probab=96.07  E-value=0.026  Score=51.40  Aligned_cols=130  Identities=22%  Similarity=0.226  Sum_probs=88.5

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCC---------CccHHHHHHHH
Q 018072          191 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH---------DRPIQEVIAEM  261 (361)
Q Consensus       191 ~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~---------~~~~~~~i~~~  261 (361)
                      +..-++.++++.|.|.+|+.++..++..|+ .|...+....+.+..+.+|+..+-..+.+         ..+|.+.-.++
T Consensus       159 agtv~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~  237 (356)
T COG3288         159 AGTVSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAEL  237 (356)
T ss_pred             cccccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHHH
Confidence            345677899999999999999999999999 89999999999999988888653222111         11233332232


Q ss_pred             c-C--CCccEEEEcc---CChH--H-HHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc--cccEEEEee
Q 018072          262 T-N--GGVDRSVECT---GNID--N-MISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL--NERTLKGTF  322 (361)
Q Consensus       262 ~-~--~g~Dvvid~~---g~~~--~-~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~--~~~~l~g~~  322 (361)
                      . .  .++|+||-+.   |.+.  . -...++.|+++ +.++.+....+.+.-...+....  ++++|.|..
T Consensus       238 ~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpG-SViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~  308 (356)
T COG3288         238 VAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPG-SVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYT  308 (356)
T ss_pred             HHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCC-cEEEEehhhcCCCcccccCCeEEEeCCeEEEeec
Confidence            2 2  2899999975   2221  2 34778899997 99998865543322222222222  899999875

>PRK07024 short chain dehydrogenase; Provisional

Probab=96.07  E-value=0.04  Score=49.69  Aligned_cols=79  Identities=18%  Similarity=0.173  Sum_probs=51.0

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCC--C-EEEcCCCCC-ccHHHHHHHHcC--CCcc
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGV--T-DFVNTSEHD-RPIQEVIAEMTN--GGVD  267 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~--~-~vv~~~~~~-~~~~~~i~~~~~--~g~D  267 (361)
                      +.+++|+|+ |++|...+..+...|+ +|+.++++.++++.+.+ +..  . ..+..+-.+ ..+.+.+.....  +.+|
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id   80 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPD   80 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence            458999987 9999999998888898 89999999887765533 221  1 122222122 123333333322  2589


Q ss_pred             EEEEccCC
Q 018072          268 RSVECTGN  275 (361)
Q Consensus       268 vvid~~g~  275 (361)
                      ++++++|.
T Consensus        81 ~lv~~ag~   88 (257)
T PRK07024         81 VVIANAGI   88 (257)
T ss_pred             EEEECCCc
Confidence            99998873

>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed

Probab=96.06  E-value=0.064  Score=47.01  Aligned_cols=100  Identities=22%  Similarity=0.270  Sum_probs=65.2

Q ss_pred             hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcC
Q 018072          188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN  263 (361)
Q Consensus       188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~  263 (361)
                      .+...++++++||-+|+|. |..+..+++.. . +|++++.+++..+.+++    ++...+ .....+  ..+   .+..
T Consensus        71 ~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v-~~~~~d--~~~---~~~~  141 (212)
T PRK00312         71 TELLELKPGDRVLEIGTGS-GYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNV-SVRHGD--GWK---GWPA  141 (212)
T ss_pred             HHhcCCCCCCEEEEECCCc-cHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCce-EEEECC--ccc---CCCc
Confidence            4567789999999998865 55555566553 3 89999999887766644    454321 111111  100   1111


Q ss_pred             -CCccEEEEccCChHHHHHHHHHhcCCCcEEEEEc
Q 018072          264 -GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       264 -~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                       +.||+|+.............+.|+++ |+++..-
T Consensus       142 ~~~fD~I~~~~~~~~~~~~l~~~L~~g-G~lv~~~  175 (212)
T PRK00312        142 YAPFDRILVTAAAPEIPRALLEQLKEG-GILVAPV  175 (212)
T ss_pred             CCCcCEEEEccCchhhhHHHHHhcCCC-cEEEEEE
Confidence             37999998766656677888999997 9987653

>PRK09072 short chain dehydrogenase; Provisional

Probab=96.06  E-value=0.044  Score=49.51  Aligned_cols=80  Identities=25%  Similarity=0.375  Sum_probs=51.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-c--CCC-EEEcCCCCC-ccHHHHHHHHc-CCCcc
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F--GVT-DFVNTSEHD-RPIQEVIAEMT-NGGVD  267 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~--G~~-~vv~~~~~~-~~~~~~i~~~~-~~g~D  267 (361)
                      ++.++||+|+ |++|...+..+...|+ +|+++++++++.+.+.+ +  +.. ..+..+-.+ ..+.+...... .+.+|
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id   82 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGIN   82 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence            4678999987 9999999998888898 89999999887665543 2  211 122222222 11222222221 24789


Q ss_pred             EEEEccCC
Q 018072          268 RSVECTGN  275 (361)
Q Consensus       268 vvid~~g~  275 (361)
                      ++++++|.
T Consensus        83 ~lv~~ag~   90 (263)
T PRK09072         83 VLINNAGV   90 (263)
T ss_pred             EEEECCCC
Confidence            99999875

>PRK00536 speE spermidine synthase; Provisional

Probab=96.05  E-value=0.028  Score=50.96  Aligned_cols=102  Identities=10%  Similarity=-0.030  Sum_probs=66.6

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEc-
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC-  272 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~-  272 (361)
                      ...++|||+|+|- |.++-.++|.-  .+|+.++.+++-.+.++++=....-..++..-++...+.+...+.||+||-- 
T Consensus        71 ~~pk~VLIiGGGD-Gg~~REvLkh~--~~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv~l~~~~~~~~~~~fDVIIvDs  147 (262)
T PRK00536         71 KELKEVLIVDGFD-LELAHQLFKYD--THVDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIICLQ  147 (262)
T ss_pred             CCCCeEEEEcCCc-hHHHHHHHCcC--CeeEEEECCHHHHHHHHHHCHHHHHhhcCCCEEEeehhhhccCCcCCEEEEcC
Confidence            4458999998765 55666788775  2899999999999998883221100111211111112333233479998754 


Q ss_pred             cCChHHHHHHHHHhcCCCcEEEEEcCC
Q 018072          273 TGNIDNMISAFECVHDGWGVAVLVGVP  299 (361)
Q Consensus       273 ~g~~~~~~~~~~~l~~~~G~iv~~g~~  299 (361)
                      +-.++.++.+.+.|+++ |.++.-+..
T Consensus       148 ~~~~~fy~~~~~~L~~~-Gi~v~Qs~s  173 (262)
T PRK00536        148 EPDIHKIDGLKRMLKED-GVFISVAKH  173 (262)
T ss_pred             CCChHHHHHHHHhcCCC-cEEEECCCC
Confidence            66767888999999998 999887543

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.05  E-value=0.06  Score=45.16  Aligned_cols=89  Identities=21%  Similarity=0.274  Sum_probs=58.1

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChH
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  277 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~  277 (361)
                      +|-++|.|.+|...++-+...|. +|.+.++++++.+.+.+.|+... +  +    ..+.+.     ..|+||-++.+.+
T Consensus         3 ~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~~-~--s----~~e~~~-----~~dvvi~~v~~~~   69 (163)
T PF03446_consen    3 KIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEVA-D--S----PAEAAE-----QADVVILCVPDDD   69 (163)
T ss_dssp             EEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEEE-S--S----HHHHHH-----HBSEEEE-SSSHH
T ss_pred             EEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhhh-h--h----hhhHhh-----cccceEeecccch
Confidence            68899999999999998888898 89999999999999888774322 1  1    333332     2588888888766


Q ss_pred             HHHHHHHH------hcCCCcEEEEEcCCC
Q 018072          278 NMISAFEC------VHDGWGVAVLVGVPS  300 (361)
Q Consensus       278 ~~~~~~~~------l~~~~G~iv~~g~~~  300 (361)
                      ..+..+..      +.++ ..++.++...
T Consensus        70 ~v~~v~~~~~i~~~l~~g-~iiid~sT~~   97 (163)
T PF03446_consen   70 AVEAVLFGENILAGLRPG-KIIIDMSTIS   97 (163)
T ss_dssp             HHHHHHHCTTHGGGS-TT-EEEEE-SS--
T ss_pred             hhhhhhhhhHHhhccccc-eEEEecCCcc
Confidence            65554443      4444 5566665444

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK07062 short chain dehydrogenase; Provisional

Probab=96.04  E-value=0.033  Score=50.40  Aligned_cols=79  Identities=27%  Similarity=0.344  Sum_probs=52.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-----cCCCE----EEcCCCCCccHHHHHHHHcC-
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVTD----FVNTSEHDRPIQEVIAEMTN-  263 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-----~G~~~----vv~~~~~~~~~~~~i~~~~~-  263 (361)
                      .|.+++|+|+ +++|...++.+...|+ +|+.+++++++++.+.+     .+...    ..|..+.+ ++.+.+..... 
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~v~~~~~~~~~~   84 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEA-DVAAFAAAVEAR   84 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHH-HHHHHHHHHHHh
Confidence            4678999998 8999999999988999 89999998877655422     11112    12333321 23333333322 


Q ss_pred             -CCccEEEEccCC
Q 018072          264 -GGVDRSVECTGN  275 (361)
Q Consensus       264 -~g~Dvvid~~g~  275 (361)
                       +.+|++++++|.
T Consensus        85 ~g~id~li~~Ag~   97 (265)
T PRK07062         85 FGGVDMLVNNAGQ   97 (265)
T ss_pred             cCCCCEEEECCCC
Confidence             368999999984

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=96.04  E-value=0.048  Score=51.50  Aligned_cols=91  Identities=24%  Similarity=0.281  Sum_probs=56.3

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh---------------------hhH----HHHHHcCCCEEEcCCCC
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS---------------------KRF----EEAKKFGVTDFVNTSEH  250 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~---------------------~~~----~~~~~~G~~~vv~~~~~  250 (361)
                      ..+|+|+|+|++|..+++.+...|..+++.+|.+.                     .|.    +.+++++.+..+.....
T Consensus        24 ~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~~~  103 (338)
T PRK12475         24 EKHVLIVGAGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPVVT  103 (338)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEEec
Confidence            46799999999999999999999998999998874                     122    33344544332221111


Q ss_pred             CccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcC
Q 018072          251 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHD  288 (361)
Q Consensus       251 ~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~  288 (361)
                      +.+ .+.+.++. .++|+|||++.+.+.-...-+....
T Consensus       104 ~~~-~~~~~~~~-~~~DlVid~~D~~~~r~~in~~~~~  139 (338)
T PRK12475        104 DVT-VEELEELV-KEVDLIIDATDNFDTRLLINDLSQK  139 (338)
T ss_pred             cCC-HHHHHHHh-cCCCEEEEcCCCHHHHHHHHHHHHH
Confidence            101 12333332 2699999999886653333333333

>PRK06483 dihydromonapterin reductase; Provisional

Probab=96.03  E-value=0.052  Score=48.12  Aligned_cols=78  Identities=18%  Similarity=0.227  Sum_probs=50.8

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhh-HHHHHHcCCCE-EEcCCCCCccHHHHHHHHcC--CCccEEE
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-FEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTN--GGVDRSV  270 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~-~~~~~~~G~~~-vv~~~~~~~~~~~~i~~~~~--~g~Dvvi  270 (361)
                      +.++||+|+ +++|...++.+...|+ +|+.++++++. .+.+++.++.. ..|..+. .++.+.+.....  +++|+++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~id~lv   79 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADFSTN-AGIMAFIDELKQHTDGLRAII   79 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCCCCH-HHHHHHHHHHHhhCCCccEEE
Confidence            458999988 8999999998888898 88888887653 33344455432 1232222 123444444332  2689999


Q ss_pred             EccCC
Q 018072          271 ECTGN  275 (361)
Q Consensus       271 d~~g~  275 (361)
                      +++|.
T Consensus        80 ~~ag~   84 (236)
T PRK06483         80 HNASD   84 (236)
T ss_pred             ECCcc
Confidence            99874

>PRK08317 hypothetical protein; Provisional

Probab=96.01  E-value=0.039  Score=48.90  Aligned_cols=104  Identities=24%  Similarity=0.341  Sum_probs=69.1

Q ss_pred             hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHHc--CCCEEEcCCCCCccHHHHHHHHcCC
Q 018072          188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKF--GVTDFVNTSEHDRPIQEVIAEMTNG  264 (361)
Q Consensus       188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g-~~~Vi~~~~~~~~~~~~~~~--G~~~vv~~~~~~~~~~~~i~~~~~~  264 (361)
                      .+...++++++||-+|+|. |..+..++...+ ..+++++|.+++.++.+++.  .....+.....+  ... . .+.++
T Consensus        12 ~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d--~~~-~-~~~~~   86 (241)
T PRK08317         12 FELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGD--ADG-L-PFPDG   86 (241)
T ss_pred             HHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecc--ccc-C-CCCCC
Confidence            4567789999999999976 888888888773 34899999999988888764  111111111111  000 0 12234


Q ss_pred             CccEEEEcc------CChHHHHHHHHHhcCCCcEEEEEc
Q 018072          265 GVDRSVECT------GNIDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       265 g~Dvvid~~------g~~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      .+|+|+...      .....+..+.+.|+++ |.+++..
T Consensus        87 ~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~  124 (241)
T PRK08317         87 SFDAVRSDRVLQHLEDPARALAEIARVLRPG-GRVVVLD  124 (241)
T ss_pred             CceEEEEechhhccCCHHHHHHHHHHHhcCC-cEEEEEe
Confidence            789888632      2234678999999998 9988765

>PRK07478 short chain dehydrogenase; Provisional

Probab=96.01  E-value=0.039  Score=49.54  Aligned_cols=80  Identities=20%  Similarity=0.275  Sum_probs=52.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHD-RPIQEVIAEMTN--GG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g  265 (361)
                      .+.+++|+|+ |++|...+..+...|+ +|+.+++++++++.+.    +.+... .+..+-.+ .+..+.+.+...  +.
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGG   83 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            3678999988 8999999998888899 8999989887766542    234332 22222122 123333333222  37


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++|+++|.
T Consensus        84 id~li~~ag~   93 (254)
T PRK07478         84 LDIAFNNAGT   93 (254)
T ss_pred             CCEEEECCCC
Confidence            8999999874

>PRK07677 short chain dehydrogenase; Provisional

Probab=96.01  E-value=0.042  Score=49.30  Aligned_cols=79  Identities=22%  Similarity=0.320  Sum_probs=51.2

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCC-EEEcCCCCC-ccHHHHHHHHcC--CCc
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHD-RPIQEVIAEMTN--GGV  266 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~-~vv~~~~~~-~~~~~~i~~~~~--~g~  266 (361)
                      |.++||+|+ |++|...++.+...|. +|+++++++++.+.+.+    .+.. ..+..+-.+ ..+.+.+.+...  +.+
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRI   79 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence            468999988 8999999999888999 89999998876655432    2322 222222222 123333333321  368


Q ss_pred             cEEEEccCC
Q 018072          267 DRSVECTGN  275 (361)
Q Consensus       267 Dvvid~~g~  275 (361)
                      |++|++.|.
T Consensus        80 d~lI~~ag~   88 (252)
T PRK07677         80 DALINNAAG   88 (252)
T ss_pred             cEEEECCCC
Confidence            999999873

>PRK08628 short chain dehydrogenase; Provisional

Probab=96.00  E-value=0.037  Score=49.77  Aligned_cols=80  Identities=23%  Similarity=0.242  Sum_probs=51.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH---cCCCE-EEcCCCCC-ccHHHHHHHHcC--CCc
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK---FGVTD-FVNTSEHD-RPIQEVIAEMTN--GGV  266 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~---~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g~  266 (361)
                      .|.++||+|+ |++|...++.+...|+ +|+.+++++++.+..++   .+... .+..+-.+ .++.+.+.....  +++
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI   84 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            3678999998 8999999988888898 78888888876644433   34332 22222122 123333333222  378


Q ss_pred             cEEEEccCC
Q 018072          267 DRSVECTGN  275 (361)
Q Consensus       267 Dvvid~~g~  275 (361)
                      |++|.++|.
T Consensus        85 d~vi~~ag~   93 (258)
T PRK08628         85 DGLVNNAGV   93 (258)
T ss_pred             CEEEECCcc
Confidence            999999983

>PLN03075 nicotianamine synthase; Provisional

Probab=95.99  E-value=0.047  Score=50.24  Aligned_cols=98  Identities=13%  Similarity=0.096  Sum_probs=67.2

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHHcC-----CCEEEcCCCCCccHHHHHHHHc-CCCc
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKFG-----VTDFVNTSEHDRPIQEVIAEMT-NGGV  266 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g-~~~Vi~~~~~~~~~~~~~~~G-----~~~vv~~~~~~~~~~~~i~~~~-~~g~  266 (361)
                      .++++|+-+|+|+.++.++-+++... ..+++.+|.+++..+.+++.-     ...-+.+...+  ..+.   .. .++|
T Consensus       122 ~~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~D--a~~~---~~~l~~F  196 (296)
T PLN03075        122 GVPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTAD--VMDV---TESLKEY  196 (296)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECc--hhhc---ccccCCc
Confidence            37799999999999998888886653 338999999999888887643     22223332222  2111   11 2479


Q ss_pred             cEEEEcc-------CChHHHHHHHHHhcCCCcEEEEEc
Q 018072          267 DRSVECT-------GNIDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       267 Dvvid~~-------g~~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      |+||-.+       .....++...+.|+++ |.++.-.
T Consensus       197 DlVF~~ALi~~dk~~k~~vL~~l~~~LkPG-G~Lvlr~  233 (296)
T PLN03075        197 DVVFLAALVGMDKEEKVKVIEHLGKHMAPG-ALLMLRS  233 (296)
T ss_pred             CEEEEecccccccccHHHHHHHHHHhcCCC-cEEEEec
Confidence            9999875       2334678888999997 8876554

>PLN02476 O-methyltransferase

Probab=95.99  E-value=0.075  Score=48.57  Aligned_cols=105  Identities=20%  Similarity=0.211  Sum_probs=70.6

Q ss_pred             hhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHc-
Q 018072          189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT-  262 (361)
Q Consensus       189 ~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g-~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~-  262 (361)
                      ...+..+..+||=+|.+. |..++.+|+.++ -.+|+.++.+++..+.+++    .|...-+.....+  ..+.+..+. 
T Consensus       112 ~L~~~~~ak~VLEIGT~t-GySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~Gd--A~e~L~~l~~  188 (278)
T PLN02476        112 MLVQILGAERCIEVGVYT-GYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHGL--AAESLKSMIQ  188 (278)
T ss_pred             HHHHhcCCCeEEEecCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC--HHHHHHHHHh
Confidence            345567788999998743 666667777664 2379999999998888744    6776433333333  444554442 


Q ss_pred             ---CCCccEEEEccCCh---HHHHHHHHHhcCCCcEEEEEc
Q 018072          263 ---NGGVDRSVECTGNI---DNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       263 ---~~g~Dvvid~~g~~---~~~~~~~~~l~~~~G~iv~~g  297 (361)
                         .+.||.||--....   +.++.+++.|+++ |.++.=.
T Consensus       189 ~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~G-GvIV~DN  228 (278)
T PLN02476        189 NGEGSSYDFAFVDADKRMYQDYFELLLQLVRVG-GVIVMDN  228 (278)
T ss_pred             cccCCCCCEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEec
Confidence               23799999877653   3577889999997 8876543

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=95.99  E-value=0.023  Score=49.41  Aligned_cols=98  Identities=15%  Similarity=0.228  Sum_probs=61.6

Q ss_pred             hhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcCC
Q 018072          189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNG  264 (361)
Q Consensus       189 ~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~~  264 (361)
                      +.....++.+||-+|+|. |..+..+|+. |. +|+++|.+++-++.+++    .+...+ .....+  +.+.  . .++
T Consensus        24 ~~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~~d--~~~~--~-~~~   94 (197)
T PRK11207         24 EAVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNL-HTAVVD--LNNL--T-FDG   94 (197)
T ss_pred             HhcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEecC--hhhC--C-cCC
Confidence            344456778999999876 7777777765 77 99999999987766654    233211 111111  1110  1 123


Q ss_pred             CccEEEEccC----C----hHHHHHHHHHhcCCCcEEEEE
Q 018072          265 GVDRSVECTG----N----IDNMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       265 g~Dvvid~~g----~----~~~~~~~~~~l~~~~G~iv~~  296 (361)
                      .||+|+.+..    .    ...+....+.|+++ |.++++
T Consensus        95 ~fD~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~~~~~  133 (197)
T PRK11207         95 EYDFILSTVVLMFLEAKTIPGLIANMQRCTKPG-GYNLIV  133 (197)
T ss_pred             CcCEEEEecchhhCCHHHHHHHHHHHHHHcCCC-cEEEEE
Confidence            6999997633    1    24566788889998 986544

>PRK07890 short chain dehydrogenase; Provisional

Probab=95.98  E-value=0.041  Score=49.39  Aligned_cols=79  Identities=24%  Similarity=0.331  Sum_probs=51.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCE---EEcCCCCCccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD---FVNTSEHDRPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~---vv~~~~~~~~~~~~i~~~~~--~  264 (361)
                      ++.+++|+|+ |++|...+..+...|+ +|+.+++++++.+.+.+    .+...   ..|..+. ..+...+.....  +
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g   81 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDE-DQCANLVALALERFG   81 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCH-HHHHHHHHHHHHHcC
Confidence            4678999988 9999999998888998 89999998876655432    23321   2222221 123333333222  3


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      .+|++|++.|.
T Consensus        82 ~~d~vi~~ag~   92 (258)
T PRK07890         82 RVDALVNNAFR   92 (258)
T ss_pred             CccEEEECCcc
Confidence            68999999874

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=95.97  E-value=0.26  Score=38.46  Aligned_cols=92  Identities=22%  Similarity=0.286  Sum_probs=61.4

Q ss_pred             EEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHH
Q 018072          199 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDN  278 (361)
Q Consensus       199 VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~  278 (361)
                      |+|+|.|.+|...++.++..+. +|++++.++++.+.+++.|.. ++.-+..+   .+.+++..-..+|.++-++++...
T Consensus         1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~-~i~gd~~~---~~~l~~a~i~~a~~vv~~~~~d~~   75 (116)
T PF02254_consen    1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVE-VIYGDATD---PEVLERAGIEKADAVVILTDDDEE   75 (116)
T ss_dssp             EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSE-EEES-TTS---HHHHHHTTGGCESEEEEESSSHHH
T ss_pred             eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhcccc-cccccchh---hhHHhhcCccccCEEEEccCCHHH
Confidence            6788999999999999999665 899999999999999998855 34333333   223333322378999988887543


Q ss_pred             HH---HHHHHhcCCCcEEEEE
Q 018072          279 MI---SAFECVHDGWGVAVLV  296 (361)
Q Consensus       279 ~~---~~~~~l~~~~G~iv~~  296 (361)
                      -.   ...+.+.+. .+++..
T Consensus        76 n~~~~~~~r~~~~~-~~ii~~   95 (116)
T PF02254_consen   76 NLLIALLARELNPD-IRIIAR   95 (116)
T ss_dssp             HHHHHHHHHHHTTT-SEEEEE
T ss_pred             HHHHHHHHHHHCCC-CeEEEE
Confidence            22   333444454 555543

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.97  E-value=0.048  Score=49.71  Aligned_cols=79  Identities=22%  Similarity=0.250  Sum_probs=51.3

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhh----HHHHHHcCCC--EEEcCCCCCccHHHHHHHHcCC--
Q 018072          194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR----FEEAKKFGVT--DFVNTSEHDRPIQEVIAEMTNG--  264 (361)
Q Consensus       194 ~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~----~~~~~~~G~~--~vv~~~~~~~~~~~~i~~~~~~--  264 (361)
                      -.|+.|||+|+ +++|.+.++=...+|+ +++.+|.+++.    .+..++.|-.  .+.|..+. +++.+..++.-++  
T Consensus        36 v~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~-eei~~~a~~Vk~e~G  113 (300)
T KOG1201|consen   36 VSGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDR-EEIYRLAKKVKKEVG  113 (300)
T ss_pred             ccCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCCH-HHHHHHHHHHHHhcC
Confidence            46899999988 7999987776667788 88888888753    4444545522  23333332 2243333333322  


Q ss_pred             CccEEEEccC
Q 018072          265 GVDRSVECTG  274 (361)
Q Consensus       265 g~Dvvid~~g  274 (361)
                      .+|++++++|
T Consensus       114 ~V~ILVNNAG  123 (300)
T KOG1201|consen  114 DVDILVNNAG  123 (300)
T ss_pred             CceEEEeccc
Confidence            7899999987

>PRK05854 short chain dehydrogenase; Provisional

Probab=95.97  E-value=0.048  Score=50.95  Aligned_cols=79  Identities=19%  Similarity=0.238  Sum_probs=50.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-c-----CCC-EE--EcCCCCCccHHHHHHHHcC-
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F-----GVT-DF--VNTSEHDRPIQEVIAEMTN-  263 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~-----G~~-~v--v~~~~~~~~~~~~i~~~~~-  263 (361)
                      .|.+++|+|+ +++|...+..+...|+ +|+.+.+++++.+.+.+ +     +.. ..  .|..+.+ .+.+....+.. 
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~-sv~~~~~~~~~~   90 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLA-SVAALGEQLRAE   90 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHH-HHHHHHHHHHHh
Confidence            3678999998 8999999998888898 89988898876554322 1     121 12  2332221 23333333322 


Q ss_pred             -CCccEEEEccCC
Q 018072          264 -GGVDRSVECTGN  275 (361)
Q Consensus       264 -~g~Dvvid~~g~  275 (361)
                       +.+|++|+++|.
T Consensus        91 ~~~iD~li~nAG~  103 (313)
T PRK05854         91 GRPIHLLINNAGV  103 (313)
T ss_pred             CCCccEEEECCcc
Confidence             378999998873

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=95.96  E-value=0.054  Score=52.18  Aligned_cols=92  Identities=26%  Similarity=0.338  Sum_probs=55.0

Q ss_pred             EEEEcCCHHHHHHHHHHHHcCCC-eEEEEcCChhhHHHHHH--cCCCE-EEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072          199 VAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKK--FGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       199 VlI~G~g~vG~~a~~~a~~~g~~-~Vi~~~~~~~~~~~~~~--~G~~~-vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      |+|+|+|.+|..+++.+...+.. +|++.+++.++.+.+.+  .+... .+..+-.+  .. .+.++.. +.|+||+|+|
T Consensus         1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~--~~-~l~~~~~-~~dvVin~~g   76 (386)
T PF03435_consen    1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND--PE-SLAELLR-GCDVVINCAG   76 (386)
T ss_dssp             EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT--HH-HHHHHHT-TSSEEEE-SS
T ss_pred             CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC--HH-HHHHHHh-cCCEEEECCc
Confidence            68899999999999988877643 89999999999877754  22222 12122222  22 3555544 4699999998


Q ss_pred             ChHHHHHHHHHhcCCCcEEEE
Q 018072          275 NIDNMISAFECVHDGWGVAVL  295 (361)
Q Consensus       275 ~~~~~~~~~~~l~~~~G~iv~  295 (361)
                      .......+-.++..+ -.++.
T Consensus        77 p~~~~~v~~~~i~~g-~~yvD   96 (386)
T PF03435_consen   77 PFFGEPVARACIEAG-VHYVD   96 (386)
T ss_dssp             GGGHHHHHHHHHHHT--EEEE
T ss_pred             cchhHHHHHHHHHhC-CCeec
Confidence            753333444444443 44444

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.96  E-value=0.045  Score=49.21  Aligned_cols=79  Identities=20%  Similarity=0.276  Sum_probs=49.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHHHHcCCCEE-EcCCCCCccHHHHHHHHcC--CCccEE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTN--GGVDRS  269 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~-~~~~~~~~~~~G~~~v-v~~~~~~~~~~~~i~~~~~--~g~Dvv  269 (361)
                      .+.+++|+|+ |++|...++.+...|+ +|+.+.+ +++..+.+++.+...+ .|..+. ..+.+.+.....  +++|++
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~~~id~l   83 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGNR-DQVKKSKEVVEKEFGRVDVL   83 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCCH-HHHHHHHHHHHHHcCCCCEE
Confidence            3678999988 9999999998888898 6766644 4444455544443222 233332 123344433322  368999


Q ss_pred             EEccCC
Q 018072          270 VECTGN  275 (361)
Q Consensus       270 id~~g~  275 (361)
                      |.++|.
T Consensus        84 i~~ag~   89 (255)
T PRK06463         84 VNNAGI   89 (255)
T ss_pred             EECCCc
Confidence            999874

>PRK04457 spermidine synthase; Provisional

Probab=95.95  E-value=0.1  Score=47.42  Aligned_cols=98  Identities=17%  Similarity=0.120  Sum_probs=66.7

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc-CCC---EEEcCCCCCccHHHHHHHHcCCCccEE
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GVT---DFVNTSEHDRPIQEVIAEMTNGGVDRS  269 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~-G~~---~vv~~~~~~~~~~~~i~~~~~~g~Dvv  269 (361)
                      .++.+||++|+|+ |.++..+++.....+|++++.+++-.+.++++ +..   .-+.....|  ..+.+... .+.||+|
T Consensus        65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~~D--a~~~l~~~-~~~yD~I  140 (262)
T PRK04457         65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIEAD--GAEYIAVH-RHSTDVI  140 (262)
T ss_pred             CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEECC--HHHHHHhC-CCCCCEE
Confidence            4567899999976 78888888887655899999999999998874 321   111111122  44444432 3479999


Q ss_pred             EEcc-C---------ChHHHHHHHHHhcCCCcEEEEE
Q 018072          270 VECT-G---------NIDNMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       270 id~~-g---------~~~~~~~~~~~l~~~~G~iv~~  296 (361)
                      +--. .         ..+.++.+.+.|+++ |.++.-
T Consensus       141 ~~D~~~~~~~~~~l~t~efl~~~~~~L~pg-Gvlvin  176 (262)
T PRK04457        141 LVDGFDGEGIIDALCTQPFFDDCRNALSSD-GIFVVN  176 (262)
T ss_pred             EEeCCCCCCCccccCcHHHHHHHHHhcCCC-cEEEEE
Confidence            8422 1         136788999999998 998763

>PRK01581 speE spermidine synthase; Validated

Probab=95.94  E-value=0.2  Score=47.50  Aligned_cols=100  Identities=17%  Similarity=0.103  Sum_probs=65.6

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCC----------CEEEcCCCCCccHHHHHHHHcC
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV----------TDFVNTSEHDRPIQEVIAEMTN  263 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~----------~~vv~~~~~~~~~~~~i~~~~~  263 (361)
                      ....+|||+|+| .|.++..+++..+..+|++++.+++-.+.++++..          +.-+.....|  ..+.+.. ..
T Consensus       149 ~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi~D--a~~fL~~-~~  224 (374)
T PRK01581        149 IDPKRVLILGGG-DGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHVCD--AKEFLSS-PS  224 (374)
T ss_pred             CCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEECc--HHHHHHh-cC
Confidence            445699999976 36667777776666699999999999999986310          0111111112  3344433 33


Q ss_pred             CCccEEEEccCCh-----------HHHHHHHHHhcCCCcEEEEEcC
Q 018072          264 GGVDRSVECTGNI-----------DNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       264 ~g~Dvvid~~g~~-----------~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      +.||+||--...+           +.+..+.+.|+++ |.++.-..
T Consensus       225 ~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPg-GV~V~Qs~  269 (374)
T PRK01581        225 SLYDVIIIDFPDPATELLSTLYTSELFARIATFLTED-GAFVCQSN  269 (374)
T ss_pred             CCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCC-cEEEEecC
Confidence            4799998765332           3567888999998 99877643

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=95.94  E-value=0.079  Score=43.30  Aligned_cols=97  Identities=20%  Similarity=0.264  Sum_probs=57.0

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh-------------------hhH----HHHHHcCCCEEEcCCCCCccH
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-------------------KRF----EEAKKFGVTDFVNTSEHDRPI  254 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~-------------------~~~----~~~~~~G~~~vv~~~~~~~~~  254 (361)
                      +|+|+|+|++|...+..+.+.|..+++.+|.+.                   .|.    +.++++....-+......  +
T Consensus         1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~--~   78 (143)
T cd01483           1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEG--I   78 (143)
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeee--c
Confidence            489999999999999999999998899987651                   122    222334432211111111  1


Q ss_pred             HH-HHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcE-EEEEcC
Q 018072          255 QE-VIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGV-AVLVGV  298 (361)
Q Consensus       255 ~~-~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~-iv~~g~  298 (361)
                      .+ ....+. .++|+|++|..+........+..+.. +. ++..|.
T Consensus        79 ~~~~~~~~~-~~~diVi~~~d~~~~~~~l~~~~~~~-~i~~i~~~~  122 (143)
T cd01483          79 SEDNLDDFL-DGVDLVIDAIDNIAVRRALNRACKEL-GIPVIDAGG  122 (143)
T ss_pred             ChhhHHHHh-cCCCEEEECCCCHHHHHHHHHHHHHc-CCCEEEEcC
Confidence            11 111111 36999999999866555555555554 44 444443

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=95.93  E-value=0.06  Score=48.06  Aligned_cols=80  Identities=25%  Similarity=0.351  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChh--hHHHHHHcCCCE-EEcCCCCC-ccHHHHHHHHcC--CCcc
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK--RFEEAKKFGVTD-FVNTSEHD-RPIQEVIAEMTN--GGVD  267 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~--~~~~~~~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g~D  267 (361)
                      .|.++||+|+ |++|...+..+...|+ +|+.+++++.  ..+.+++++... .+..+-.+ .++...+.+...  +++|
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   82 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID   82 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4689999998 8999999998888898 8998887652  223334455332 22222221 123333333322  3689


Q ss_pred             EEEEccCC
Q 018072          268 RSVECTGN  275 (361)
Q Consensus       268 vvid~~g~  275 (361)
                      ++++++|.
T Consensus        83 ~li~~ag~   90 (248)
T TIGR01832        83 ILVNNAGI   90 (248)
T ss_pred             EEEECCCC
Confidence            99999874

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK07454 short chain dehydrogenase; Provisional

Probab=95.91  E-value=0.056  Score=48.05  Aligned_cols=80  Identities=24%  Similarity=0.221  Sum_probs=51.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FVNTSEHD-RPIQEVIAEMTN--GG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g  265 (361)
                      .+.+++|+|+ |++|...+..+...|. +|+++++++++.+.+.+    .+... .+..+-.+ ..+...+.....  ++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC   83 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4578999987 9999999999988998 89999998876654432    23222 22222222 123333333222  36


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++++++|.
T Consensus        84 id~lv~~ag~   93 (241)
T PRK07454         84 PDVLINNAGM   93 (241)
T ss_pred             CCEEEECCCc
Confidence            8999999874

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=95.89  E-value=0.047  Score=49.09  Aligned_cols=79  Identities=27%  Similarity=0.412  Sum_probs=51.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-EE--cCCCCCccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FV--NTSEHDRPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-vv--~~~~~~~~~~~~i~~~~~--~  264 (361)
                      .+.++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+.    +.|... .+  |..+. ..+.+.+.....  +
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   86 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDH-DAVRAAIDAFEAEIG   86 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCH-HHHHHHHHHHHHhcC
Confidence            4689999988 9999999998888898 8999999887655432    233322 22  22222 123333333221  3


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      .+|++|+++|.
T Consensus        87 ~~d~li~~ag~   97 (255)
T PRK07523         87 PIDILVNNAGM   97 (255)
T ss_pred             CCCEEEECCCC
Confidence            68999999874

>PRK08703 short chain dehydrogenase; Provisional

Probab=95.89  E-value=0.068  Score=47.50  Aligned_cols=80  Identities=28%  Similarity=0.389  Sum_probs=51.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCC-C---EEEcCCCC-CccHH---HHHHHH
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGV-T---DFVNTSEH-DRPIQ---EVIAEM  261 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~-~---~vv~~~~~-~~~~~---~~i~~~  261 (361)
                      ++.+++|+|+ |++|...++.+...|. +|+++++++++.+.+.+    .+. .   ...|..+. ...+.   +.+...
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~   83 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA   83 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence            3578999988 9999999998888898 89999999877655422    221 1   11332221 11122   233333


Q ss_pred             cCCCccEEEEccCC
Q 018072          262 TNGGVDRSVECTGN  275 (361)
Q Consensus       262 ~~~g~Dvvid~~g~  275 (361)
                      ..+.+|++|+++|.
T Consensus        84 ~~~~id~vi~~ag~   97 (239)
T PRK08703         84 TQGKLDGIVHCAGY   97 (239)
T ss_pred             hCCCCCEEEEeccc
Confidence            32478999999884

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=95.88  E-value=0.054  Score=45.84  Aligned_cols=95  Identities=16%  Similarity=0.304  Sum_probs=60.8

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 018072          198 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  276 (361)
Q Consensus       198 ~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~  276 (361)
                      +|.|+|+ |-+|...++-|+..|. .|+++.+++.|....+..-   ++..+-.+  ....-..+  .|+|+||++.+..
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~~---i~q~Difd--~~~~a~~l--~g~DaVIsA~~~~   73 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGVT---ILQKDIFD--LTSLASDL--AGHDAVISAFGAG   73 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccce---eecccccC--hhhhHhhh--cCCceEEEeccCC
Confidence            5889998 9999999999999999 8999999999876542211   11111111  11110111  2799999998754


Q ss_pred             --H-------HHHHHHHHhcCC-CcEEEEEcCCC
Q 018072          277 --D-------NMISAFECVHDG-WGVAVLVGVPS  300 (361)
Q Consensus       277 --~-------~~~~~~~~l~~~-~G~iv~~g~~~  300 (361)
                        +       ..+..+..|+.. --|+..+|..+
T Consensus        74 ~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAG  107 (211)
T COG2910          74 ASDNDELHSKSIEALIEALKGAGVPRLLVVGGAG  107 (211)
T ss_pred             CCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence              1       233455666652 14788887644

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=95.88  E-value=0.075  Score=48.91  Aligned_cols=44  Identities=25%  Similarity=0.271  Sum_probs=38.1

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK  238 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~  238 (361)
                      .+.+++|+|+|+.+.+++..+...|+.+|+++.++.+|.+.+.+
T Consensus       126 ~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~  169 (283)
T PRK14027        126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALAD  169 (283)
T ss_pred             CCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHH
Confidence            46799999999999999998888998899999999888776643

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.86  E-value=0.083  Score=48.44  Aligned_cols=95  Identities=20%  Similarity=0.245  Sum_probs=65.0

Q ss_pred             ccccchhhhhhhhhhhcCC-CCCCEEEEEcCCH-HHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCc
Q 018072          175 ILSCGVSTGLGATLNVAKP-ERGSSVAVFGLGA-VGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR  252 (361)
Q Consensus       175 ~l~~~~~ta~~a~~~~~~~-~~g~~VlI~G~g~-vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~  252 (361)
                      .+||.....+. +++..++ -.|.+|+|+|.|. +|.-++.++...|+ +|+.+.+....                    
T Consensus       137 ~~PcTp~ai~~-ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t~~--------------------  194 (286)
T PRK14175        137 FVPCTPLGIME-ILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRSKD--------------------  194 (286)
T ss_pred             CCCCcHHHHHH-HHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCchh--------------------
Confidence            34544333333 2344443 4689999999964 99999999999998 88888553211                    


Q ss_pred             cHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072          253 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       253 ~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                       +.+.++     .+|+||.++|.+..+..  +.++++ ..++.+|...
T Consensus       195 -l~~~~~-----~ADIVIsAvg~p~~i~~--~~vk~g-avVIDvGi~~  233 (286)
T PRK14175        195 -MASYLK-----DADVIVSAVGKPGLVTK--DVVKEG-AVIIDVGNTP  233 (286)
T ss_pred             -HHHHHh-----hCCEEEECCCCCcccCH--HHcCCC-cEEEEcCCCc
Confidence             222221     48999999999777665  468886 8888898754

>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []

Probab=95.86  E-value=0.021  Score=51.23  Aligned_cols=108  Identities=22%  Similarity=0.199  Sum_probs=66.6

Q ss_pred             hhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHH-HHHH
Q 018072          187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQE-VIAE  260 (361)
Q Consensus       187 ~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~-~i~~  260 (361)
                      +....+++||++|+=.|.|. |.++..+++..|. .+|+..+.++++.+.+++    +|....+.....|  +.+ ...+
T Consensus        32 I~~~l~i~pG~~VlEaGtGS-G~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~D--v~~~g~~~  108 (247)
T PF08704_consen   32 ILMRLDIRPGSRVLEAGTGS-GSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRD--VCEEGFDE  108 (247)
T ss_dssp             HHHHTT--TT-EEEEE--TT-SHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES---GGCG--ST
T ss_pred             HHHHcCCCCCCEEEEecCCc-HHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecc--eecccccc
Confidence            35678999999999987654 6677777777653 589999999999888754    6665322222211  110 1101


Q ss_pred             HcCCCccEEEEccCChH-HHHHHHHHh-cCCCcEEEEEcC
Q 018072          261 MTNGGVDRSVECTGNID-NMISAFECV-HDGWGVAVLVGV  298 (361)
Q Consensus       261 ~~~~g~Dvvid~~g~~~-~~~~~~~~l-~~~~G~iv~~g~  298 (361)
                      ..+..+|.||=-...|. .++.+.+.| +++ |+++.+..
T Consensus       109 ~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~g-G~i~~fsP  147 (247)
T PF08704_consen  109 ELESDFDAVFLDLPDPWEAIPHAKRALKKPG-GRICCFSP  147 (247)
T ss_dssp             T-TTSEEEEEEESSSGGGGHHHHHHHE-EEE-EEEEEEES
T ss_pred             cccCcccEEEEeCCCHHHHHHHHHHHHhcCC-ceEEEECC
Confidence            11236787765555444 789999999 887 99988853

; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=95.85  E-value=0.059  Score=50.94  Aligned_cols=88  Identities=25%  Similarity=0.319  Sum_probs=55.0

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh---------------------hhH----HHHHHcCCCEEEcCCCC
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS---------------------KRF----EEAKKFGVTDFVNTSEH  250 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~---------------------~~~----~~~~~~G~~~vv~~~~~  250 (361)
                      ..+|+|+|+|++|..+++.+...|..+++.+|.+.                     .|.    +.+++++....+.....
T Consensus        24 ~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~~~  103 (339)
T PRK07688         24 EKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAIVQ  103 (339)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEEec
Confidence            36799999999999999999999999999998863                     122    23344554332222111


Q ss_pred             CccHHHHHHHHcCCCccEEEEccCChHHHHHHHHH
Q 018072          251 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFEC  285 (361)
Q Consensus       251 ~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~  285 (361)
                      +. ..+.+.++. .++|+|+|++.+.++-....+.
T Consensus       104 ~~-~~~~~~~~~-~~~DlVid~~Dn~~~r~~ln~~  136 (339)
T PRK07688        104 DV-TAEELEELV-TGVDLIIDATDNFETRFIVNDA  136 (339)
T ss_pred             cC-CHHHHHHHH-cCCCEEEEcCCCHHHHHHHHHH
Confidence            10 112233332 2689999999986654333333

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=95.84  E-value=0.1  Score=46.45  Aligned_cols=91  Identities=22%  Similarity=0.264  Sum_probs=55.6

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh-------------------hhHH----HHHHcCCCEEEcCCCCCc
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-------------------KRFE----EAKKFGVTDFVNTSEHDR  252 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~-------------------~~~~----~~~~~G~~~vv~~~~~~~  252 (361)
                      ..+|+|+|+|++|...+..+.+.|..+++.+|.+.                   .|.+    .+++++.+.-+...... 
T Consensus        21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~~~-   99 (228)
T cd00757          21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYNER-   99 (228)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEecce-
Confidence            46899999999999999999999998888885542                   1222    22334443222222211 


Q ss_pred             cH-HHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCC
Q 018072          253 PI-QEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDG  289 (361)
Q Consensus       253 ~~-~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~  289 (361)
                       + .+.+.++. .++|+||+|+.+...-....+.....
T Consensus       100 -i~~~~~~~~~-~~~DvVi~~~d~~~~r~~l~~~~~~~  135 (228)
T cd00757         100 -LDAENAEELI-AGYDLVLDCTDNFATRYLINDACVKL  135 (228)
T ss_pred             -eCHHHHHHHH-hCCCEEEEcCCCHHHHHHHHHHHHHc
Confidence             1 12233332 25999999999876644444444443

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=95.83  E-value=0.073  Score=47.40  Aligned_cols=101  Identities=20%  Similarity=0.203  Sum_probs=60.2

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh-------------------hhH----HHHHHcCCCEEEcCCCCCc
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-------------------KRF----EEAKKFGVTDFVNTSEHDR  252 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~-------------------~~~----~~~~~~G~~~vv~~~~~~~  252 (361)
                      ..+|+|+|+|++|..++..+.+.|..+++.+|.+.                   .|.    +.+++++.+.-+...+...
T Consensus        11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~~~i   90 (231)
T cd00755          11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVEEFL   90 (231)
T ss_pred             CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEeeeec
Confidence            35799999999999999999999998999987653                   111    2223344432222211110


Q ss_pred             cHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEc
Q 018072          253 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       253 ~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                       ..+....+...++|+|+||..+...-....+.....+=.++..+
T Consensus        91 -~~~~~~~l~~~~~D~VvdaiD~~~~k~~L~~~c~~~~ip~I~s~  134 (231)
T cd00755          91 -TPDNSEDLLGGDPDFVVDAIDSIRAKVALIAYCRKRKIPVISSM  134 (231)
T ss_pred             -CHhHHHHHhcCCCCEEEEcCCCHHHHHHHHHHHHHhCCCEEEEe
Confidence             01233334444699999999886654445555554412344443

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK05884 short chain dehydrogenase; Provisional

Probab=95.83  E-value=0.072  Score=47.05  Aligned_cols=74  Identities=23%  Similarity=0.298  Sum_probs=49.4

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCCCEE-EcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072          198 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       198 ~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~-~~~G~~~v-v~~~~~~~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      +++|+|+ |++|...++.+...|. +|+.+++++++++.+ ++++...+ .|..+. ..+.+.+.... +.+|+++++.|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~-~~id~lv~~ag   78 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTDP-ASLEEARGLFP-HHLDTIVNVPA   78 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCCH-HHHHHHHHHHh-hcCcEEEECCC
Confidence            5899987 9999999998888898 899999998877655 34444332 222222 12333333332 26899999865

>PRK06194 hypothetical protein; Provisional

Probab=95.82  E-value=0.058  Score=49.40  Aligned_cols=79  Identities=20%  Similarity=0.238  Sum_probs=50.5

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-H---cCCCE-EEcCCCCC-ccHHHHHHHHc--CCCc
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-K---FGVTD-FVNTSEHD-RPIQEVIAEMT--NGGV  266 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~---~G~~~-vv~~~~~~-~~~~~~i~~~~--~~g~  266 (361)
                      +.++||+|+ |++|...++.+...|+ +|+.++++.++++... +   .+... .+..+-.+ ..+.+.+....  .+++
T Consensus         6 ~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i   84 (287)
T PRK06194          6 GKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV   84 (287)
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            578999987 9999999998888898 8999998876654432 2   23332 12222222 12333333222  1368


Q ss_pred             cEEEEccCC
Q 018072          267 DRSVECTGN  275 (361)
Q Consensus       267 Dvvid~~g~  275 (361)
                      |++|+++|.
T Consensus        85 d~vi~~Ag~   93 (287)
T PRK06194         85 HLLFNNAGV   93 (287)
T ss_pred             CEEEECCCC
Confidence            999999875

>PLN02253 xanthoxin dehydrogenase

Probab=95.82  E-value=0.048  Score=49.80  Aligned_cols=79  Identities=19%  Similarity=0.204  Sum_probs=50.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCC--C-EE--EcCCCCCccHHHHHHHHcC--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGV--T-DF--VNTSEHDRPIQEVIAEMTN--GG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~--~-~v--v~~~~~~~~~~~~i~~~~~--~g  265 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+. +++.  . ..  .|..+.+ .+.+.+.....  ++
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~-~~~~~~~~~~~~~g~   94 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVED-DVSRAVDFTVDKFGT   94 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHH-HHHHHHHHHHHHhCC
Confidence            3678999987 9999999988888898 8999988776554432 3321  1 12  2333221 23333333222  36


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++|+++|.
T Consensus        95 id~li~~Ag~  104 (280)
T PLN02253         95 LDIMVNNAGL  104 (280)
T ss_pred             CCEEEECCCc
Confidence            8999999874

>PRK06198 short chain dehydrogenase; Provisional

Probab=95.81  E-value=0.046  Score=49.17  Aligned_cols=80  Identities=23%  Similarity=0.314  Sum_probs=51.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHH----HHHcCCCEE---EcCCCCCccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE----AKKFGVTDF---VNTSEHDRPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~----~~~~G~~~v---v~~~~~~~~~~~~i~~~~~--~  264 (361)
                      .+.+++|+|+ |++|...++.+...|+..|+++++++++.+.    +++.+....   .|..+.+ .+.+.+.....  +
T Consensus         5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g   83 (260)
T PRK06198          5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVE-DCRRVVAAADEAFG   83 (260)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHH-HHHHHHHHHHHHhC
Confidence            4678999998 9999999999989999449999888765542    233444321   2332221 23333333221  3


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      ++|++|++.|.
T Consensus        84 ~id~li~~ag~   94 (260)
T PRK06198         84 RLDALVNAAGL   94 (260)
T ss_pred             CCCEEEECCCc
Confidence            68999999874

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=95.81  E-value=0.053  Score=50.73  Aligned_cols=78  Identities=21%  Similarity=0.294  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcC---CC-EE--EcCCCCCccHHHHHHHHc--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFG---VT-DF--VNTSEHDRPIQEVIAEMT--NG  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G---~~-~v--v~~~~~~~~~~~~i~~~~--~~  264 (361)
                      ++.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+. ++.   .. ..  .|..+. ..+.+.+..+.  .+
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~~   82 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDL-DSVRRFVDDFRALGK   82 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCH-HHHHHHHHHHHHhCC
Confidence            4678999988 9999999998888898 8999999887765543 232   11 12  222221 12333333322  12


Q ss_pred             CccEEEEccC
Q 018072          265 GVDRSVECTG  274 (361)
Q Consensus       265 g~Dvvid~~g  274 (361)
                      ++|++|+++|
T Consensus        83 ~iD~li~nAg   92 (322)
T PRK07453         83 PLDALVCNAA   92 (322)
T ss_pred             CccEEEECCc
Confidence            6899999987

>PRK08589 short chain dehydrogenase; Validated

Probab=95.81  E-value=0.051  Score=49.52  Aligned_cols=79  Identities=23%  Similarity=0.323  Sum_probs=49.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH---cCCCE---EEcCCCCCccHHHHHHHHcC--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK---FGVTD---FVNTSEHDRPIQEVIAEMTN--GG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~---~G~~~---vv~~~~~~~~~~~~i~~~~~--~g  265 (361)
                      .+.++||+|+ +++|...++.+...|+ +|+.++++++..+.+.+   .+...   ..|..+.+ ++.+.+.....  ++
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~g~   82 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQ-QVKDFASEIKEQFGR   82 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHH-HHHHHHHHHHHHcCC
Confidence            4679999988 8999999988888898 89999888433233332   33321   23333221 23333333322  36


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++|+++|.
T Consensus        83 id~li~~Ag~   92 (272)
T PRK08589         83 VDVLFNNAGV   92 (272)
T ss_pred             cCEEEECCCC
Confidence            8999999874

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=95.81  E-value=0.074  Score=48.72  Aligned_cols=79  Identities=27%  Similarity=0.360  Sum_probs=58.5

Q ss_pred             CCCCEEEEEcC-CHHHHH-HHHHHHHcCCCeEEEEcCChhhHHHHHH-----cCCC---EEEcCCCCCccHHHHHHHHcC
Q 018072          194 ERGSSVAVFGL-GAVGLA-AAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVT---DFVNTSEHDRPIQEVIAEMTN  263 (361)
Q Consensus       194 ~~g~~VlI~G~-g~vG~~-a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-----~G~~---~vv~~~~~~~~~~~~i~~~~~  263 (361)
                      +-|++.+|+|+ .++|.. |-++|+ .|. +|+.+.|+++|++..++     .++.   .++|+...+. .-+.+++...
T Consensus        47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~-~ye~i~~~l~  123 (312)
T KOG1014|consen   47 KLGSWAVVTGATDGIGKAYARELAK-RGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDE-VYEKLLEKLA  123 (312)
T ss_pred             hcCCEEEEECCCCcchHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCch-hHHHHHHHhc
Confidence            56789999998 799977 555666 899 79999999999887643     5543   3677777664 3455555555


Q ss_pred             C-CccEEEEccCC
Q 018072          264 G-GVDRSVECTGN  275 (361)
Q Consensus       264 ~-g~Dvvid~~g~  275 (361)
                      + .+-+.++++|.
T Consensus       124 ~~~VgILVNNvG~  136 (312)
T KOG1014|consen  124 GLDVGILVNNVGM  136 (312)
T ss_pred             CCceEEEEecccc
Confidence            5 78899999984

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=95.80  E-value=0.073  Score=48.00  Aligned_cols=77  Identities=26%  Similarity=0.381  Sum_probs=49.8

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCEEEcCCCCC-ccHHHHHHHHcC--CCccEE
Q 018072          198 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHD-RPIQEVIAEMTN--GGVDRS  269 (361)
Q Consensus       198 ~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~vv~~~~~~-~~~~~~i~~~~~--~g~Dvv  269 (361)
                      ++||+|+ +++|...++.+...|+ +|+.+++++++++.+.    +.+....+..+-.+ ..+.+.+.....  +++|++
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l   80 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL   80 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            6899988 8999999998888898 8999999887765442    22322222222222 123333333322  378999


Q ss_pred             EEccCC
Q 018072          270 VECTGN  275 (361)
Q Consensus       270 id~~g~  275 (361)
                      |++.|.
T Consensus        81 i~naG~   86 (259)
T PRK08340         81 VWNAGN   86 (259)
T ss_pred             EECCCC
Confidence            999874

>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A

Probab=95.79  E-value=0.028  Score=43.94  Aligned_cols=96  Identities=26%  Similarity=0.330  Sum_probs=58.3

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcCCCccEEEE
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  271 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid  271 (361)
                      |.+||-.|+|. |...+.+++.. ..+++++|.+++..+.++.    .+.+.-+.....+  +.+....+..+.+|+|+-
T Consensus         1 g~~vlD~~~G~-G~~~~~~~~~~-~~~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~~~D--~~~~~~~~~~~~~D~Iv~   76 (117)
T PF13659_consen    1 GDRVLDPGCGS-GTFLLAALRRG-AARVTGVDIDPEAVELARRNLPRNGLDDRVEVIVGD--ARDLPEPLPDGKFDLIVT   76 (117)
T ss_dssp             TEEEEEETSTT-CHHHHHHHHHC-TCEEEEEESSHHHHHHHHHHCHHCTTTTTEEEEESH--HHHHHHTCTTT-EEEEEE
T ss_pred             CCEEEEcCcch-HHHHHHHHHHC-CCeEEEEEECHHHHHHHHHHHHHccCCceEEEEECc--hhhchhhccCceeEEEEE
Confidence            56788887643 44555555554 4499999999998888765    3332111111222  433333344458999998


Q ss_pred             ccCC--------------hHHHHHHHHHhcCCCcEEEEE
Q 018072          272 CTGN--------------IDNMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       272 ~~g~--------------~~~~~~~~~~l~~~~G~iv~~  296 (361)
                      +..-              ...++.+.+.|+++ |.++++
T Consensus        77 npP~~~~~~~~~~~~~~~~~~~~~~~~~L~~g-G~~~~~  114 (117)
T PF13659_consen   77 NPPYGPRSGDKAALRRLYSRFLEAAARLLKPG-GVLVFI  114 (117)
T ss_dssp             --STTSBTT----GGCHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             CCCCccccccchhhHHHHHHHHHHHHHHcCCC-eEEEEE
Confidence            6532              12477899999997 998765

...

>PRK06482 short chain dehydrogenase; Provisional

Probab=95.79  E-value=0.056  Score=49.24  Aligned_cols=78  Identities=18%  Similarity=0.283  Sum_probs=50.8

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCE-EEcCCCCC-ccHHHHHHHHcC--CCccEEE
Q 018072          197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD-FVNTSEHD-RPIQEVIAEMTN--GGVDRSV  270 (361)
Q Consensus       197 ~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g~Dvvi  270 (361)
                      .++||+|+ |++|...++.+...|. +|+++.+++++++.+.+ .+... ++..+-.+ ..+.+.+.....  +++|++|
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi   81 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVV   81 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            47999987 9999999988888898 89999999887766654 23221 22222122 123333333221  3689999


Q ss_pred             EccCC
Q 018072          271 ECTGN  275 (361)
Q Consensus       271 d~~g~  275 (361)
                      +++|.
T Consensus        82 ~~ag~   86 (276)
T PRK06482         82 SNAGY   86 (276)
T ss_pred             ECCCC
Confidence            99874

>PRK07063 short chain dehydrogenase; Provisional

Probab=95.78  E-value=0.051  Score=48.96  Aligned_cols=79  Identities=23%  Similarity=0.269  Sum_probs=51.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-c-----CCCE-EE--cCCCCCccHHHHHHHHcC-
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F-----GVTD-FV--NTSEHDRPIQEVIAEMTN-  263 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~-----G~~~-vv--~~~~~~~~~~~~i~~~~~-  263 (361)
                      .+.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+.+ +     +... .+  |..+. .++.+.+..... 
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~   83 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTDA-ASVAAAVAAAEEA   83 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCH-HHHHHHHHHHHHH
Confidence            4678999988 9999999998888998 89999998877655432 2     2221 22  22222 123333333322 


Q ss_pred             -CCccEEEEccCC
Q 018072          264 -GGVDRSVECTGN  275 (361)
Q Consensus       264 -~g~Dvvid~~g~  275 (361)
                       +.+|++|+++|.
T Consensus        84 ~g~id~li~~ag~   96 (260)
T PRK07063         84 FGPLDVLVNNAGI   96 (260)
T ss_pred             hCCCcEEEECCCc
Confidence             379999999873

>PRK07985 oxidoreductase; Provisional

Probab=95.76  E-value=0.13  Score=47.57  Aligned_cols=103  Identities=17%  Similarity=0.189  Sum_probs=61.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCh--hhHHHH----HHcCCCE-E--EcCCCCCccHHHHHHHHcC-
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS--KRFEEA----KKFGVTD-F--VNTSEHDRPIQEVIAEMTN-  263 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~--~~~~~~----~~~G~~~-v--v~~~~~~~~~~~~i~~~~~-  263 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+.+.++.  ++.+.+    ++.+... .  .|..+. ..+.+.+..... 
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~  125 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDE-KFARSLVHEAHKA  125 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCH-HHHHHHHHHHHHH
Confidence            4678999998 9999999998888898 788776542  233332    2334322 1  222222 123333333322 


Q ss_pred             -CCccEEEEccCCh-----------H---------------HHHHHHHHhcCCCcEEEEEcCCC
Q 018072          264 -GGVDRSVECTGNI-----------D---------------NMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       264 -~g~Dvvid~~g~~-----------~---------------~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                       +++|+++++.|..           +               ....+++.+..+ |+++.++...
T Consensus       126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~iv~iSS~~  188 (294)
T PRK07985        126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKG-ASIITTSSIQ  188 (294)
T ss_pred             hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcC-CEEEEECCch
Confidence             3789999988731           0               123444556666 8999887543

>PRK07904 short chain dehydrogenase; Provisional

Probab=95.76  E-value=0.091  Score=47.37  Aligned_cols=82  Identities=20%  Similarity=0.253  Sum_probs=50.9

Q ss_pred             CCCCCEEEEEcC-CHHHHHHHHHHHHcC-CCeEEEEcCChhh-HHH----HHHcCC-C-EEEcCCCCC-ccHHHHHHHHc
Q 018072          193 PERGSSVAVFGL-GAVGLAAAEGARIAG-ASRIIGVDRSSKR-FEE----AKKFGV-T-DFVNTSEHD-RPIQEVIAEMT  262 (361)
Q Consensus       193 ~~~g~~VlI~G~-g~vG~~a~~~a~~~g-~~~Vi~~~~~~~~-~~~----~~~~G~-~-~vv~~~~~~-~~~~~~i~~~~  262 (361)
                      +..+.+|||+|+ |++|...++-+...| + +|+.+++++++ ++.    +++.+. . +++..+-.+ .++.+.+....
T Consensus         5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   83 (253)
T PRK07904          5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAF   83 (253)
T ss_pred             cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHH
Confidence            456789999998 999999888766665 6 89999888765 332    333343 1 222222222 12333344333


Q ss_pred             C-CCccEEEEccCC
Q 018072          263 N-GGVDRSVECTGN  275 (361)
Q Consensus       263 ~-~g~Dvvid~~g~  275 (361)
                      . +++|+++.+.|.
T Consensus        84 ~~g~id~li~~ag~   97 (253)
T PRK07904         84 AGGDVDVAIVAFGL   97 (253)
T ss_pred             hcCCCCEEEEeeec
Confidence            2 479999987764

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=95.76  E-value=0.073  Score=47.16  Aligned_cols=79  Identities=23%  Similarity=0.318  Sum_probs=51.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCEEE---cCCCCCccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDFV---NTSEHDRPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~vv---~~~~~~~~~~~~i~~~~~--~  264 (361)
                      ++.++||+|+ |.+|...++.+...|. +|+++++++++.+.+    +..+....+   |..+. ..+.+.+.....  +
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~   81 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDE-AAVRALIEAAVEAFG   81 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCH-HHHHHHHHHHHHHhC
Confidence            3568999998 9999999998888898 799999988775443    234443322   22222 123333333221  2


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      .+|.+++++|.
T Consensus        82 ~id~vi~~ag~   92 (246)
T PRK05653         82 ALDILVNNAGI   92 (246)
T ss_pred             CCCEEEECCCc
Confidence            68999999864

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=95.76  E-value=0.059  Score=48.52  Aligned_cols=79  Identities=29%  Similarity=0.460  Sum_probs=51.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCE-EE--cCCCCCccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FV--NTSEHDRPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~-vv--~~~~~~~~~~~~i~~~~~--~  264 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+.++++.++++.+.+    .+... .+  |..+. ..+.+.+.....  +
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~-~~i~~~~~~~~~~~~   88 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVADE-ADIERLAEETLERFG   88 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCH-HHHHHHHHHHHHHhC
Confidence            4678999987 9999999998888898 89999998877655432    23321 22  22222 123333333222  3


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      ++|++|.++|.
T Consensus        89 ~id~vi~~ag~   99 (259)
T PRK08213         89 HVDILVNNAGA   99 (259)
T ss_pred             CCCEEEECCCC
Confidence            68999999874

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=95.75  E-value=0.04  Score=50.62  Aligned_cols=95  Identities=20%  Similarity=0.206  Sum_probs=60.0

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEc
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  272 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~  272 (361)
                      ..+.+++|+|+|++|.+++..+...|..+|+++.++.++.+.+.+ ++....+.. ..+  ..+.     -..+|+||++
T Consensus       121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~~--~~~~-----~~~~DivIna  192 (278)
T PRK00258        121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DLE--LQEE-----LADFDLIINA  192 (278)
T ss_pred             CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-ccc--chhc-----cccCCEEEEC
Confidence            456789999999999999999999996699999999988766543 332110111 000  1000     0268999999


Q ss_pred             cCChHH-----HHHHHHHhcCCCcEEEEEc
Q 018072          273 TGNIDN-----MISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       273 ~g~~~~-----~~~~~~~l~~~~G~iv~~g  297 (361)
                      +...-.     .......+++. ..++.+-
T Consensus       193 Tp~g~~~~~~~~~~~~~~l~~~-~~v~Div  221 (278)
T PRK00258        193 TSAGMSGELPLPPLPLSLLRPG-TIVYDMI  221 (278)
T ss_pred             CcCCCCCCCCCCCCCHHHcCCC-CEEEEee
Confidence            865211     01223566665 6666553

>PRK06172 short chain dehydrogenase; Provisional

Probab=95.75  E-value=0.056  Score=48.45  Aligned_cols=80  Identities=23%  Similarity=0.321  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMTN--GG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g  265 (361)
                      .+.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+    ++.+... .+..+-.+ ..+.+.+.....  ++
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   84 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGR   84 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            4679999998 9999999988888898 899999987765433    3334332 22112111 123333332211  36


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|+++++.|.
T Consensus        85 id~li~~ag~   94 (253)
T PRK06172         85 LDYAFNNAGI   94 (253)
T ss_pred             CCEEEECCCC
Confidence            8999999874

>PRK05717 oxidoreductase; Validated

Probab=95.75  E-value=0.076  Score=47.72  Aligned_cols=80  Identities=23%  Similarity=0.276  Sum_probs=51.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCCCE-EEcCCCCC-ccHHHHHHHHcC--CCccE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD-FVNTSEHD-RPIQEVIAEMTN--GGVDR  268 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~-~~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g~Dv  268 (361)
                      .|.+++|+|+ |++|...+..+...|+ +|+.++++.++.+.+ ++++... .+..+-.+ ..+.+.+.+...  +.+|+
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   87 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA   87 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4678999987 9999999998888898 899888877655443 3344322 22222122 123333333322  36899


Q ss_pred             EEEccCC
Q 018072          269 SVECTGN  275 (361)
Q Consensus       269 vid~~g~  275 (361)
                      +|++.|.
T Consensus        88 li~~ag~   94 (255)
T PRK05717         88 LVCNAAI   94 (255)
T ss_pred             EEECCCc
Confidence            9999874

>PRK06179 short chain dehydrogenase; Provisional

Probab=95.75  E-value=0.036  Score=50.28  Aligned_cols=76  Identities=26%  Similarity=0.365  Sum_probs=50.2

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCE-EEcCCCCCccHHHHHHHHcC--CCccEEEE
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTN--GGVDRSVE  271 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~-vv~~~~~~~~~~~~i~~~~~--~g~Dvvid  271 (361)
                      +.+++|+|+ |++|...++.+...|+ +|+++++++++.+..  .+... ..|..+. .++.+.+.....  +.+|++|+
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~--~~~~~~~~D~~d~-~~~~~~~~~~~~~~g~~d~li~   79 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPI--PGVELLELDVTDD-ASVQAAVDEVIARAGRIDVLVN   79 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccc--CCCeeEEeecCCH-HHHHHHHHHHHHhCCCCCEEEE
Confidence            468999988 9999999988888898 899998887665432  12222 2233222 224444444322  36899999


Q ss_pred             ccCC
Q 018072          272 CTGN  275 (361)
Q Consensus       272 ~~g~  275 (361)
                      +.|.
T Consensus        80 ~ag~   83 (270)
T PRK06179         80 NAGV   83 (270)
T ss_pred             CCCC
Confidence            9984

>PRK06138 short chain dehydrogenase; Provisional

Probab=95.74  E-value=0.052  Score=48.50  Aligned_cols=80  Identities=21%  Similarity=0.254  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-c--CCC-EEEcCCCCC-ccHHHHHHHHcC--CCc
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F--GVT-DFVNTSEHD-RPIQEVIAEMTN--GGV  266 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~--G~~-~vv~~~~~~-~~~~~~i~~~~~--~g~  266 (361)
                      .+.+++|+|+ |.+|...++.+...|+ +|+.+.++.++.+...+ +  +.. ..+..+-.+ ..+.+.+.....  +++
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i   82 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL   82 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            3568999988 9999999988878898 89999888776554332 2  322 222222222 123333333221  378


Q ss_pred             cEEEEccCC
Q 018072          267 DRSVECTGN  275 (361)
Q Consensus       267 Dvvid~~g~  275 (361)
                      |+++++.|.
T Consensus        83 d~vi~~ag~   91 (252)
T PRK06138         83 DVLVNNAGF   91 (252)
T ss_pred             CEEEECCCC
Confidence            999999884

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=95.74  E-value=0.11  Score=44.83  Aligned_cols=76  Identities=29%  Similarity=0.275  Sum_probs=49.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-c----CCCEE-EcCCCCCccHHHHHHHHcCCCcc
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F----GVTDF-VNTSEHDRPIQEVIAEMTNGGVD  267 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~----G~~~v-v~~~~~~~~~~~~i~~~~~~g~D  267 (361)
                      .+.+++|+|+ |.+|...+..+...|. +|+.+.++.++.+.+.+ +    +.... .+..+    .. .+.+.. .++|
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~----~~-~~~~~~-~~~d   99 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGVGAVETSD----DA-ARAAAI-KGAD   99 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC----HH-HHHHHH-hcCC
Confidence            5689999997 9999988888888887 89999999887666543 2    33221 11111    11 122221 2589


Q ss_pred             EEEEccCChH
Q 018072          268 RSVECTGNID  277 (361)
Q Consensus       268 vvid~~g~~~  277 (361)
                      +||.++..+.
T Consensus       100 iVi~at~~g~  109 (194)
T cd01078         100 VVFAAGAAGV  109 (194)
T ss_pred             EEEECCCCCc
Confidence            9999887643

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.73  E-value=0.06  Score=48.45  Aligned_cols=79  Identities=16%  Similarity=0.327  Sum_probs=50.2

Q ss_pred             CCCEEEEEcCC---HHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCE--E--EcCCCCCccHHHHHHHHcC--CC
Q 018072          195 RGSSVAVFGLG---AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--F--VNTSEHDRPIQEVIAEMTN--GG  265 (361)
Q Consensus       195 ~g~~VlI~G~g---~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~--v--v~~~~~~~~~~~~i~~~~~--~g  265 (361)
                      .|.+++|+|++   ++|.+.++.+...|+ +|+.++++++..+.++++....  .  .|..+. .++.+.+.....  +.
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~g~   83 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVASD-ESIERAFATIKERVGK   83 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCCH-HHHHHHHHHHHHHhCC
Confidence            46889999874   899999998888998 8988888754444444442221  2  222221 123333333322  36


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++++++|.
T Consensus        84 iD~lv~nAg~   93 (252)
T PRK06079         84 IDGIVHAIAY   93 (252)
T ss_pred             CCEEEEcccc
Confidence            9999999873

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.72  E-value=0.17  Score=45.70  Aligned_cols=78  Identities=17%  Similarity=0.326  Sum_probs=48.0

Q ss_pred             CCCEEEEEcC---CHHHHHHHHHHHHcCCCeEEEEcCCh---hhHHHHH-Hc-CCC-EE--EcCCCCCccHHHHHHHHcC
Q 018072          195 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSS---KRFEEAK-KF-GVT-DF--VNTSEHDRPIQEVIAEMTN  263 (361)
Q Consensus       195 ~g~~VlI~G~---g~vG~~a~~~a~~~g~~~Vi~~~~~~---~~~~~~~-~~-G~~-~v--v~~~~~~~~~~~~i~~~~~  263 (361)
                      .|.+++|+|+   +++|.+.++.+...|+ +|+.+++++   ++++.+. ++ +.. ..  .|..+. ..+.+.+.....
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~   83 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSD-EEITACFETIKE   83 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCH-HHHHHHHHHHHH
Confidence            4678999986   5999999988888898 788876543   3344332 33 222 12  233222 224444444332


Q ss_pred             --CCccEEEEccC
Q 018072          264 --GGVDRSVECTG  274 (361)
Q Consensus       264 --~g~Dvvid~~g  274 (361)
                        +++|++++++|
T Consensus        84 ~~g~ld~lv~nag   96 (257)
T PRK08594         84 EVGVIHGVAHCIA   96 (257)
T ss_pred             hCCCccEEEECcc
Confidence              47999999886

>PRK08618 ornithine cyclodeaminase; Validated

Probab=95.72  E-value=0.16  Score=47.81  Aligned_cols=94  Identities=17%  Similarity=0.162  Sum_probs=64.6

Q ss_pred             CCCCEEEEEcCCHHHHHHHHH-HHHcCCCeEEEEcCChhhHHHHHH-----cCCCEEEcCCCCCccHHHHHHHHcCCCcc
Q 018072          194 ERGSSVAVFGLGAVGLAAAEG-ARIAGASRIIGVDRSSKRFEEAKK-----FGVTDFVNTSEHDRPIQEVIAEMTNGGVD  267 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~-a~~~g~~~Vi~~~~~~~~~~~~~~-----~G~~~vv~~~~~~~~~~~~i~~~~~~g~D  267 (361)
                      +...+++|+|+|..|...+.. +...+.++|.++++++++.+.+.+     ++... ..+.+    +.+.+     ...|
T Consensus       125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~-~~~~~----~~~~~-----~~aD  194 (325)
T PRK08618        125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEI-YVVNS----ADEAI-----EEAD  194 (325)
T ss_pred             CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcE-EEeCC----HHHHH-----hcCC
Confidence            456789999999999877754 445688899999999888765432     34432 21221    33333     2589


Q ss_pred             EEEEccCChHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072          268 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       268 vvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      +|+.++++...+- . +.++++ -.++.+|...
T Consensus       195 iVi~aT~s~~p~i-~-~~l~~G-~hV~~iGs~~  224 (325)
T PRK08618        195 IIVTVTNAKTPVF-S-EKLKKG-VHINAVGSFM  224 (325)
T ss_pred             EEEEccCCCCcch-H-HhcCCC-cEEEecCCCC
Confidence            9999998865433 3 888886 7777888754

>PRK07856 short chain dehydrogenase; Provisional

Probab=95.72  E-value=0.043  Score=49.25  Aligned_cols=75  Identities=21%  Similarity=0.342  Sum_probs=48.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC-EE--EcCCCCCccHHHHHHHHcC--CCccE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DF--VNTSEHDRPIQEVIAEMTN--GGVDR  268 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~-~v--v~~~~~~~~~~~~i~~~~~--~g~Dv  268 (361)
                      .+.++||+|+ |++|...++.+...|. +|+.+++++++    ...+.. ..  .|..+. .++.+.+.....  +.+|+
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~----~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~~~id~   78 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPE----TVDGRPAEFHAADVRDP-DQVAALVDAIVERHGRLDV   78 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhh----hhcCCceEEEEccCCCH-HHHHHHHHHHHHHcCCCCE
Confidence            4789999987 9999999998888898 89999888765    112221 12  222221 123333333221  36899


Q ss_pred             EEEccCC
Q 018072          269 SVECTGN  275 (361)
Q Consensus       269 vid~~g~  275 (361)
                      +|+++|.
T Consensus        79 vi~~ag~   85 (252)
T PRK07856         79 LVNNAGG   85 (252)
T ss_pred             EEECCCC
Confidence            9999873

>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=95.70  E-value=0.16  Score=45.98  Aligned_cols=96  Identities=25%  Similarity=0.263  Sum_probs=62.4

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc----CCCEEEcCCCCCccHHHHHHHHcCCCccEE
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNGGVDRS  269 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~----G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvv  269 (361)
                      .++.+||=+|+|. |..+..+++. |. +|+++|.+++.++.+++.    |...-+.....+  .. .+....++.||+|
T Consensus        43 ~~~~~vLDiGcG~-G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~d--~~-~l~~~~~~~fD~V  116 (255)
T PRK11036         43 PRPLRVLDAGGGE-GQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHCA--AQ-DIAQHLETPVDLI  116 (255)
T ss_pred             CCCCEEEEeCCCc-hHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEEcC--HH-HHhhhcCCCCCEE
Confidence            4567899888876 6777777775 66 899999999988887653    322111111111  21 1222234479999


Q ss_pred             EEcc-----CC-hHHHHHHHHHhcCCCcEEEEE
Q 018072          270 VECT-----GN-IDNMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       270 id~~-----g~-~~~~~~~~~~l~~~~G~iv~~  296 (361)
                      +...     .. ...+..+.+.|+++ |+++++
T Consensus       117 ~~~~vl~~~~~~~~~l~~~~~~Lkpg-G~l~i~  148 (255)
T PRK11036        117 LFHAVLEWVADPKSVLQTLWSVLRPG-GALSLM  148 (255)
T ss_pred             EehhHHHhhCCHHHHHHHHHHHcCCC-eEEEEE
Confidence            8542     22 24578889999998 998765

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.70  E-value=0.075  Score=48.02  Aligned_cols=104  Identities=16%  Similarity=0.213  Sum_probs=63.0

Q ss_pred             CCCEEEEEcCC---HHHHHHHHHHHHcCCCeEEEEcCChhhH---HHH-HHcCCCEEEcCCCCC-ccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGLG---AVGLAAAEGARIAGASRIIGVDRSSKRF---EEA-KKFGVTDFVNTSEHD-RPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~g---~vG~~a~~~a~~~g~~~Vi~~~~~~~~~---~~~-~~~G~~~vv~~~~~~-~~~~~~i~~~~~--~  264 (361)
                      .|.++||+|++   ++|.+.++.+...|+ +|+.++++++..   +.+ ++++....+..+-.+ .++.+.+.....  +
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   87 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWG   87 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcC
Confidence            46889999873   899999988888898 888888875432   222 334432333222222 123333333322  3


Q ss_pred             CccEEEEccCCh--------------HH---------------HHHHHHHhcCCCcEEEEEcCCC
Q 018072          265 GVDRSVECTGNI--------------DN---------------MISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       265 g~Dvvid~~g~~--------------~~---------------~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      .+|++++++|..              +.               ...++..|+.+ |+++.++...
T Consensus        88 ~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~-g~Ii~iss~~  151 (258)
T PRK07533         88 RLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNG-GSLLTMSYYG  151 (258)
T ss_pred             CCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccC-CEEEEEeccc
Confidence            789999998731              11               13455667766 8888876543

>PRK07576 short chain dehydrogenase; Provisional

Probab=95.67  E-value=0.088  Score=47.73  Aligned_cols=79  Identities=24%  Similarity=0.367  Sum_probs=50.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMTN--GG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g  265 (361)
                      ++.++||+|+ |++|...++.+...|+ +|+.+++++++.+..    .+.+... .+..+-.+ .++.+.+.....  ++
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~   86 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP   86 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999988 9999999998888898 899999887765433    2233322 22222222 123333433322  36


Q ss_pred             ccEEEEccC
Q 018072          266 VDRSVECTG  274 (361)
Q Consensus       266 ~Dvvid~~g  274 (361)
                      +|++|.+.|
T Consensus        87 iD~vi~~ag   95 (264)
T PRK07576         87 IDVLVSGAA   95 (264)
T ss_pred             CCEEEECCC
Confidence            899998876

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.67  E-value=0.075  Score=47.69  Aligned_cols=91  Identities=20%  Similarity=0.253  Sum_probs=54.8

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChh-------------------hH----HHHHHcCCCEEEcCCCCCcc
Q 018072          197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK-------------------RF----EEAKKFGVTDFVNTSEHDRP  253 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~-------------------~~----~~~~~~G~~~vv~~~~~~~~  253 (361)
                      .+|+|+|+|++|..+++.+.+.|..+++.+|.+.-                   |.    +.+++++.+.-+.......+
T Consensus        25 ~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~~i~  104 (240)
T TIGR02355        25 SRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINAKLD  104 (240)
T ss_pred             CcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEeccCC
Confidence            68999999999999999999999989988866531                   11    22334444332222111100


Q ss_pred             HHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCC
Q 018072          254 IQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDG  289 (361)
Q Consensus       254 ~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~  289 (361)
                       .+.+.++. .++|+|+|++.+.+.-...-+.....
T Consensus       105 -~~~~~~~~-~~~DlVvd~~D~~~~r~~ln~~~~~~  138 (240)
T TIGR02355       105 -DAELAALI-AEHDIVVDCTDNVEVRNQLNRQCFAA  138 (240)
T ss_pred             -HHHHHHHh-hcCCEEEEcCCCHHHHHHHHHHHHHc
Confidence             11222222 26899999999876543333433333

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=95.66  E-value=0.11  Score=46.88  Aligned_cols=92  Identities=21%  Similarity=0.286  Sum_probs=55.0

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh-------------------hhH----HHHHHcCCCEEEcCCCCCc
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-------------------KRF----EEAKKFGVTDFVNTSEHDR  252 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~-------------------~~~----~~~~~~G~~~vv~~~~~~~  252 (361)
                      ..+|+|+|+|++|..++..+.+.|..+++.+|.+.                   .|.    +.++++..+.-+.......
T Consensus        32 ~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~~~i  111 (245)
T PRK05690         32 AARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETINARL  111 (245)
T ss_pred             CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEeccC
Confidence            46899999999999999999999998898886653                   122    2233344432222111110


Q ss_pred             cHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCC
Q 018072          253 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDG  289 (361)
Q Consensus       253 ~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~  289 (361)
                      + .+.+.++. .++|+||||+.+.+......+.....
T Consensus       112 ~-~~~~~~~~-~~~DiVi~~~D~~~~r~~ln~~~~~~  146 (245)
T PRK05690        112 D-DDELAALI-AGHDLVLDCTDNVATRNQLNRACFAA  146 (245)
T ss_pred             C-HHHHHHHH-hcCCEEEecCCCHHHHHHHHHHHHHh
Confidence            0 11222222 26999999999876544444444443

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=95.66  E-value=0.063  Score=48.26  Aligned_cols=79  Identities=20%  Similarity=0.331  Sum_probs=50.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChh--hHHHHHHcCCCE---EEcCCCCCccHHHHHHHHcC--CCc
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK--RFEEAKKFGVTD---FVNTSEHDRPIQEVIAEMTN--GGV  266 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~--~~~~~~~~G~~~---vv~~~~~~~~~~~~i~~~~~--~g~  266 (361)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++.  ..+.+++.+...   ..|..+.+ ++.+.+.....  +++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~g~i   84 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQQK-DIDSIVSQAVEVMGHI   84 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHH-HHHHHHHHHHHHcCCC
Confidence            4688999988 8999999998888999 8888876542  123334455432   22333322 24344433322  379


Q ss_pred             cEEEEccCC
Q 018072          267 DRSVECTGN  275 (361)
Q Consensus       267 Dvvid~~g~  275 (361)
                      |+++++.|.
T Consensus        85 D~lv~~ag~   93 (251)
T PRK12481         85 DILINNAGI   93 (251)
T ss_pred             CEEEECCCc
Confidence            999999873

>PRK08226 short chain dehydrogenase; Provisional

Probab=95.64  E-value=0.068  Score=48.20  Aligned_cols=80  Identities=23%  Similarity=0.224  Sum_probs=50.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH---cCCCE-EEcCCCCC-ccHHHHHHHHcC--CCc
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK---FGVTD-FVNTSEHD-RPIQEVIAEMTN--GGV  266 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~---~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g~  266 (361)
                      .+.+++|+|+ |++|...++.+...|+ +|+.++++++..+.+++   .+... .+..+-.+ .++.+.+.+...  +.+
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   83 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRI   83 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999987 9999999998888898 89999888754443332   23332 12112111 123333333222  368


Q ss_pred             cEEEEccCC
Q 018072          267 DRSVECTGN  275 (361)
Q Consensus       267 Dvvid~~g~  275 (361)
                      |++|.++|.
T Consensus        84 d~vi~~ag~   92 (263)
T PRK08226         84 DILVNNAGV   92 (263)
T ss_pred             CEEEECCCc
Confidence            999999883

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=95.64  E-value=0.2  Score=44.44  Aligned_cols=91  Identities=21%  Similarity=0.237  Sum_probs=60.3

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCC--eEEEEcCC----hhh--------HHHHHHcCCCEEEcCCCCCccHHHHHH
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGAS--RIIGVDRS----SKR--------FEEAKKFGVTDFVNTSEHDRPIQEVIA  259 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~--~Vi~~~~~----~~~--------~~~~~~~G~~~vv~~~~~~~~~~~~i~  259 (361)
                      -.+.+++|+|+|..|...+..+...|..  +|+.++++    .++        .++++.++... .   ..  ++.+.+ 
T Consensus        23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~---~~--~l~~~l-   95 (226)
T cd05311          23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T---GG--TLKEAL-   95 (226)
T ss_pred             ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c---cC--CHHHHH-
Confidence            4567999999999999999988888997  89999998    443        33445543211 0   01  133333 


Q ss_pred             HHcCCCccEEEEccCChHHH-HHHHHHhcCCCcEEEEEc
Q 018072          260 EMTNGGVDRSVECTGNIDNM-ISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       260 ~~~~~g~Dvvid~~g~~~~~-~~~~~~l~~~~G~iv~~g  297 (361)
                          .++|++|++++. ..+ +..++.|.++ ..+..+.
T Consensus        96 ----~~~dvlIgaT~~-G~~~~~~l~~m~~~-~ivf~ls  128 (226)
T cd05311          96 ----KGADVFIGVSRP-GVVKKEMIKKMAKD-PIVFALA  128 (226)
T ss_pred             ----hcCCEEEeCCCC-CCCCHHHHHhhCCC-CEEEEeC
Confidence                248999999973 333 3666777765 5555444

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=95.64  E-value=0.057  Score=48.63  Aligned_cols=79  Identities=28%  Similarity=0.317  Sum_probs=50.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH---cCCCE---EEcCCCCCccHHHHHHHHcC--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK---FGVTD---FVNTSEHDRPIQEVIAEMTN--GG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~---~G~~~---vv~~~~~~~~~~~~i~~~~~--~g  265 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++...+..++   .+.+.   ..|..+.+ ++.+.+.+...  ++
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~   84 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLETYA-GAQAAMAAAVEAFGR   84 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHH-HHHHHHHHHHHHcCC
Confidence            3678999988 9999999998888898 89999887643333332   34332   22333321 23333333322  37


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++++++|.
T Consensus        85 id~lv~nAg~   94 (260)
T PRK12823         85 IDVLINNVGG   94 (260)
T ss_pred             CeEEEECCcc
Confidence            9999999873

>PRK07035 short chain dehydrogenase; Provisional

Probab=95.63  E-value=0.067  Score=47.92  Aligned_cols=79  Identities=20%  Similarity=0.236  Sum_probs=50.6

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCC-EEEcCCCCC-ccHHHHHHHHcC--CCc
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHD-RPIQEVIAEMTN--GGV  266 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~-~vv~~~~~~-~~~~~~i~~~~~--~g~  266 (361)
                      +.+++|+|+ |++|...++.+...|+ +|+.++++.++.+.+.+    .+.. ..+..+-.+ ..+.+.+.....  +.+
T Consensus         8 ~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   86 (252)
T PRK07035          8 GKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL   86 (252)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            568999987 9999999999888998 89999998776554432    2332 122222221 123333333222  268


Q ss_pred             cEEEEccCC
Q 018072          267 DRSVECTGN  275 (361)
Q Consensus       267 Dvvid~~g~  275 (361)
                      |+++++.|.
T Consensus        87 d~li~~ag~   95 (252)
T PRK07035         87 DILVNNAAA   95 (252)
T ss_pred             CEEEECCCc
Confidence            999998873

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=95.63  E-value=0.071  Score=47.94  Aligned_cols=79  Identities=24%  Similarity=0.298  Sum_probs=51.8

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCE-EEcCCCCC-ccHHHHHHHHcC--CCccEE
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD-FVNTSEHD-RPIQEVIAEMTN--GGVDRS  269 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g~Dvv  269 (361)
                      +.++||+|+ |++|...++.+...|. +|+.++++.++.+.+.+ ++... .+..+-.+ .++.+.+.....  +.+|++
T Consensus         6 ~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   84 (257)
T PRK07067          6 GKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL   84 (257)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            568999998 9999999998888898 89999999887665543 33221 22222111 123333333321  368999


Q ss_pred             EEccCC
Q 018072          270 VECTGN  275 (361)
Q Consensus       270 id~~g~  275 (361)
                      +++.|.
T Consensus        85 i~~ag~   90 (257)
T PRK07067         85 FNNAAL   90 (257)
T ss_pred             EECCCc
Confidence            998863

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=95.63  E-value=0.073  Score=47.66  Aligned_cols=76  Identities=22%  Similarity=0.345  Sum_probs=51.0

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCE-E--EcCCCCCccHHHHHHHHcC--CCccEEE
Q 018072          198 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD-F--VNTSEHDRPIQEVIAEMTN--GGVDRSV  270 (361)
Q Consensus       198 ~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~-v--v~~~~~~~~~~~~i~~~~~--~g~Dvvi  270 (361)
                      +++|+|+ |++|...+..+...|+ +|+++++++++.+.+.. ++... .  .|..+. .++.+.+.....  +++|+++
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~i~~~~~~~~~~~~~id~vi   79 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRNR-AAIEEMLASLPAEWRNIDVLV   79 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCCH-HHHHHHHHHHHHHcCCCCEEE
Confidence            6899987 9999999998888898 89999999887766543 44332 1  222222 123333333322  3689999


Q ss_pred             EccCC
Q 018072          271 ECTGN  275 (361)
Q Consensus       271 d~~g~  275 (361)
                      .++|.
T Consensus        80 ~~ag~   84 (248)
T PRK10538         80 NNAGL   84 (248)
T ss_pred             ECCCc
Confidence            98874

>PRK05562 precorrin-2 dehydrogenase; Provisional

Probab=95.63  E-value=0.51  Score=41.68  Aligned_cols=119  Identities=11%  Similarity=0.016  Sum_probs=69.1

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  273 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~-~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~  273 (361)
                      .+.+|||+|+|.++.-=+..+...|+ +|+++...- +.++.+.+.|.-..+. ..    +.+.  .+  .++++||-++
T Consensus        24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA-~VtVVap~i~~el~~l~~~~~i~~~~-r~----~~~~--dl--~g~~LViaAT   93 (223)
T PRK05562         24 NKIKVLIIGGGKAAFIKGKTFLKKGC-YVYILSKKFSKEFLDLKKYGNLKLIK-GN----YDKE--FI--KDKHLIVIAT   93 (223)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCCCHHHHHHHhCCCEEEEe-CC----CChH--Hh--CCCcEEEECC
Confidence            56799999999999888888888898 777774432 2222233333322222 11    1110  11  3789999999


Q ss_pred             CChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeecC
Q 018072          274 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGN  325 (361)
Q Consensus       274 g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~~  325 (361)
                      +.++.-....+..+.. +.++.........++-++.. +. ..+++--+..|.
T Consensus        94 dD~~vN~~I~~~a~~~-~~lvn~vd~p~~~dFi~PAi-v~rg~l~IaIST~G~  144 (223)
T PRK05562         94 DDEKLNNKIRKHCDRL-YKLYIDCSDYKKGLCIIPYQ-RSTKNFVFALNTKGG  144 (223)
T ss_pred             CCHHHHHHHHHHHHHc-CCeEEEcCCcccCeEEeeeE-EecCCEEEEEECCCc
Confidence            9865555555555565 66666543333444444432 33 456665554444

>PRK08643 acetoin reductase; Validated

Probab=95.63  E-value=0.065  Score=48.12  Aligned_cols=78  Identities=21%  Similarity=0.279  Sum_probs=50.4

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCE-EE--cCCCCCccHHHHHHHHcC--CC
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FV--NTSEHDRPIQEVIAEMTN--GG  265 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~-vv--~~~~~~~~~~~~i~~~~~--~g  265 (361)
                      +.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.+    .+... .+  |..+.+ .+.+.+.+...  ++
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~~   79 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRD-QVFAAVRQVVDTFGD   79 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHH-HHHHHHHHHHHHcCC
Confidence            568999988 9999999998888898 89999888776544422    23322 12  222221 23333333321  36


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++|++.|.
T Consensus        80 id~vi~~ag~   89 (256)
T PRK08643         80 LNVVVNNAGV   89 (256)
T ss_pred             CCEEEECCCC
Confidence            8999999864

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=95.62  E-value=0.1  Score=45.94  Aligned_cols=34  Identities=24%  Similarity=0.291  Sum_probs=30.8

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  229 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~  229 (361)
                      ..+|+|+|+|++|...++.+.+.|..+++.+|.+
T Consensus        28 ~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         28 KAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             CCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            4579999999999999999999999889999887

>PRK06197 short chain dehydrogenase; Provisional

Probab=95.61  E-value=0.069  Score=49.57  Aligned_cols=79  Identities=15%  Similarity=0.246  Sum_probs=50.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-Hc-----CCC-EEEcCCCCC-ccHHHHHHHHcC--
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF-----GVT-DFVNTSEHD-RPIQEVIAEMTN--  263 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~-----G~~-~vv~~~~~~-~~~~~~i~~~~~--  263 (361)
                      .+.+++|+|+ |++|...++.+...|+ +|+.+.++.++.+.+. ++     +.. ..+..+-.+ ..+.+.+.++..  
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~   93 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY   93 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence            5689999988 9999999998888898 8888888877654331 11     121 122222222 123333333322  


Q ss_pred             CCccEEEEccC
Q 018072          264 GGVDRSVECTG  274 (361)
Q Consensus       264 ~g~Dvvid~~g  274 (361)
                      +++|++|+++|
T Consensus        94 ~~iD~li~nAg  104 (306)
T PRK06197         94 PRIDLLINNAG  104 (306)
T ss_pred             CCCCEEEECCc
Confidence            36899999987

>PRK06181 short chain dehydrogenase; Provisional

Probab=95.61  E-value=0.069  Score=48.15  Aligned_cols=78  Identities=26%  Similarity=0.337  Sum_probs=49.9

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-EEcCCCCC-ccHHHHHHHHcC--CCcc
Q 018072          197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHD-RPIQEVIAEMTN--GGVD  267 (361)
Q Consensus       197 ~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g~D  267 (361)
                      .++||+|+ |++|...++.+...|. +|+++++++++.+.+.    ..+... ++..+-.+ ..+.+.+.....  +++|
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            57999988 9999999998888898 8999999876654332    234322 22112122 123333333322  2689


Q ss_pred             EEEEccCC
Q 018072          268 RSVECTGN  275 (361)
Q Consensus       268 vvid~~g~  275 (361)
                      ++|+++|.
T Consensus        81 ~vi~~ag~   88 (263)
T PRK06181         81 ILVNNAGI   88 (263)
T ss_pred             EEEECCCc
Confidence            99999874

>PRK12367 short chain dehydrogenase; Provisional

Probab=95.60  E-value=0.099  Score=47.01  Aligned_cols=75  Identities=21%  Similarity=0.358  Sum_probs=47.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEc
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS-KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  272 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~-~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~  272 (361)
                      .+.+++|+|+ |++|...++.+...|. +|+++++++ +..+.... +....+..+-.+  . +.+.... +++|++|++
T Consensus        13 ~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~--~-~~~~~~~-~~iDilVnn   86 (245)
T PRK12367         13 QGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESNDE-SPNEWIKWECGK--E-ESLDKQL-ASLDVLILN   86 (245)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhcc-CCCeEEEeeCCC--H-HHHHHhc-CCCCEEEEC
Confidence            3679999988 8999999998888898 888888876 33322211 212222222222  1 1222322 369999999


Q ss_pred             cCC
Q 018072          273 TGN  275 (361)
Q Consensus       273 ~g~  275 (361)
                      +|.
T Consensus        87 AG~   89 (245)
T PRK12367         87 HGI   89 (245)
T ss_pred             Ccc
Confidence            874

>TIGR00138 gidB 16S rRNA methyltransferase GidB

Probab=95.59  E-value=0.081  Score=45.27  Aligned_cols=94  Identities=13%  Similarity=0.130  Sum_probs=59.2

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCEEEcCCCCCccHHHHHHHHcCCCccEEE
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSV  270 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvi  270 (361)
                      ++++||=+|+|. |..++.+++.....+|+++|.+++..+.++    +.+.+.+ .....+  ..+ +  ...+.+|+|+
T Consensus        42 ~~~~vLDiGcGt-G~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i-~~i~~d--~~~-~--~~~~~fD~I~  114 (181)
T TIGR00138        42 DGKKVIDIGSGA-GFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNV-EIVNGR--AED-F--QHEEQFDVIT  114 (181)
T ss_pred             CCCeEEEecCCC-CccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCe-EEEecc--hhh-c--cccCCccEEE
Confidence            378999999865 566666666554348999999998766654    3555332 111222  211 1  1124799998


Q ss_pred             EccC--ChHHHHHHHHHhcCCCcEEEEE
Q 018072          271 ECTG--NIDNMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       271 d~~g--~~~~~~~~~~~l~~~~G~iv~~  296 (361)
                      -..-  -++.++.+.+.|+++ |+++..
T Consensus       115 s~~~~~~~~~~~~~~~~Lkpg-G~lvi~  141 (181)
T TIGR00138       115 SRALASLNVLLELTLNLLKVG-GYFLAY  141 (181)
T ss_pred             ehhhhCHHHHHHHHHHhcCCC-CEEEEE
Confidence            7531  234566778889998 998866

GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.

>PRK12937 short chain dehydrogenase; Provisional

Probab=95.59  E-value=0.26  Score=43.70  Aligned_cols=103  Identities=17%  Similarity=0.189  Sum_probs=60.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCh-hhHH----HHHHcCCCE-EEcCCCCC-ccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS-KRFE----EAKKFGVTD-FVNTSEHD-RPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~-~~~~----~~~~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~  264 (361)
                      ++.+++|+|+ |++|...++.+...|. +++.+.++. ++.+    .+.+.+... .+..+-.+ ..+.+.+.....  +
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG   82 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4678999987 9999999999988998 666665543 2222    223334322 22222122 123333333221  3


Q ss_pred             CccEEEEccCChH-------------------------HHHHHHHHhcCCCcEEEEEcCC
Q 018072          265 GVDRSVECTGNID-------------------------NMISAFECVHDGWGVAVLVGVP  299 (361)
Q Consensus       265 g~Dvvid~~g~~~-------------------------~~~~~~~~l~~~~G~iv~~g~~  299 (361)
                      ++|++|.++|...                         ....+++.+... |+++.++..
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~ss~  141 (245)
T PRK12937         83 RIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQG-GRIINLSTS  141 (245)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccC-cEEEEEeec
Confidence            7899999987411                         123444556666 899888754

>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB

Probab=95.57  E-value=0.13  Score=50.36  Aligned_cols=105  Identities=15%  Similarity=0.230  Sum_probs=65.3

Q ss_pred             hhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCEEEcCCCCCccHHHHHHHH-cC
Q 018072          189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAEM-TN  263 (361)
Q Consensus       189 ~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~vv~~~~~~~~~~~~i~~~-~~  263 (361)
                      ...++++|++||=+|+|+ |..++.+++..+..+|+++|.++++++.++    ++|....+.....+. .  ..... ..
T Consensus       232 ~~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~-~--~~~~~~~~  307 (426)
T TIGR00563       232 TWLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDG-R--GPSQWAEN  307 (426)
T ss_pred             HHhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEecccc-c--cccccccc
Confidence            445678999999988765 555556666555348999999999987764    367652221111110 0  00001 12


Q ss_pred             CCccEEEE---ccCC-------------------------hHHHHHHHHHhcCCCcEEEEEcC
Q 018072          264 GGVDRSVE---CTGN-------------------------IDNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       264 ~g~Dvvid---~~g~-------------------------~~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      +.||.|+-   |+|.                         ...+..+++.|+++ |+++..-.
T Consensus       308 ~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~Lkpg-G~lvystc  369 (426)
T TIGR00563       308 EQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTG-GTLVYATC  369 (426)
T ss_pred             cccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEeC
Confidence            36999885   3332                         23667889999998 99886543

The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=95.57  E-value=0.11  Score=45.05  Aligned_cols=99  Identities=19%  Similarity=0.242  Sum_probs=60.7

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh-------------------hh----HHHHHHcCCCEEEcCCCCCc
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-------------------KR----FEEAKKFGVTDFVNTSEHDR  252 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~-------------------~~----~~~~~~~G~~~vv~~~~~~~  252 (361)
                      ..+|+|+|+|++|...+..+...|..++..+|.+.                   .|    .+.+++++.+..+...... 
T Consensus        21 ~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~~~-   99 (197)
T cd01492          21 SARILLIGLKGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDTDD-   99 (197)
T ss_pred             hCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEecC-
Confidence            46899999999999999999999998898887552                   01    2224556655444322221 


Q ss_pred             cHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCc-EEEEEcC
Q 018072          253 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWG-VAVLVGV  298 (361)
Q Consensus       253 ~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G-~iv~~g~  298 (361)
                       +.+...++. .++|+|+++..+.+.....-+..... + .++..+.
T Consensus       100 -~~~~~~~~~-~~~dvVi~~~~~~~~~~~ln~~c~~~-~ip~i~~~~  143 (197)
T cd01492         100 -ISEKPEEFF-SQFDVVVATELSRAELVKINELCRKL-GVKFYATGV  143 (197)
T ss_pred             -ccccHHHHH-hCCCEEEECCCCHHHHHHHHHHHHHc-CCCEEEEEe
Confidence             111111221 26899999988766544444555544 4 3444443

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK07074 short chain dehydrogenase; Provisional

Probab=95.56  E-value=0.084  Score=47.43  Aligned_cols=79  Identities=24%  Similarity=0.309  Sum_probs=50.0

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCC--EEEcCCCCC-ccHHHHHHHHcC--CCccE
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVT--DFVNTSEHD-RPIQEVIAEMTN--GGVDR  268 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~--~vv~~~~~~-~~~~~~i~~~~~--~g~Dv  268 (361)
                      +.++||+|+ |++|...+..+...|+ +|++++++.++.+.+.+ +...  ..+..+-.+ ..+.+.+.....  +++|+
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   80 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDV   80 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            468999998 9999999888888898 89999998877665433 3211  122222222 113233333221  36899


Q ss_pred             EEEccCC
Q 018072          269 SVECTGN  275 (361)
Q Consensus       269 vid~~g~  275 (361)
                      ++.+.|.
T Consensus        81 vi~~ag~   87 (257)
T PRK07074         81 LVANAGA   87 (257)
T ss_pred             EEECCCC
Confidence            9999874

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=95.56  E-value=0.22  Score=43.85  Aligned_cols=102  Identities=22%  Similarity=0.185  Sum_probs=62.7

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCCCEEEc-------CCCCCcc-HHHHHHHHc-
Q 018072          193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDFVN-------TSEHDRP-IQEVIAEMT-  262 (361)
Q Consensus       193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~-~~~G~~~vv~-------~~~~~~~-~~~~i~~~~-  262 (361)
                      +.++.+||+.|+|. |.-++-+|. .|. .|+++|.++..++.+ ++.+......       +...+-+ +...+.++. 
T Consensus        32 ~~~~~rvLd~GCG~-G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~  108 (213)
T TIGR03840        32 LPAGARVFVPLCGK-SLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA  108 (213)
T ss_pred             CCCCCeEEEeCCCc-hhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc
Confidence            35778999999976 777777774 688 899999999988875 3344321100       0000000 000111111 


Q ss_pred             --CCCccEEEEccC--------ChHHHHHHHHHhcCCCcEEEEEcC
Q 018072          263 --NGGVDRSVECTG--------NIDNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       263 --~~g~Dvvid~~g--------~~~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                        .+.||.|+|..-        -+..+....+.|+++ |++.+++.
T Consensus       109 ~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpg-G~~ll~~~  153 (213)
T TIGR03840       109 ADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPG-ARQLLITL  153 (213)
T ss_pred             ccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCC-CeEEEEEE
Confidence              136899999653        123577889999998 98776654

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PRK08862 short chain dehydrogenase; Provisional

Probab=95.55  E-value=0.15  Score=45.15  Aligned_cols=79  Identities=11%  Similarity=0.125  Sum_probs=51.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-EEcCCCCC-ccHHHHHHHHcC--C-
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHD-RPIQEVIAEMTN--G-  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~-  264 (361)
                      .|.+++|+|+ +++|...+..+...|+ +|+.+++++++++.+.    +.+.+. .+..+..+ ..+.+.+.....  + 
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR   82 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4678999998 8999998888888899 8999999888765542    335432 22222222 123333333221  3 


Q ss_pred             CccEEEEccC
Q 018072          265 GVDRSVECTG  274 (361)
Q Consensus       265 g~Dvvid~~g  274 (361)
                      .+|++|++.|
T Consensus        83 ~iD~li~nag   92 (227)
T PRK08862         83 APDVLVNNWT   92 (227)
T ss_pred             CCCEEEECCc
Confidence            6899999986

>PRK08264 short chain dehydrogenase; Validated

Probab=95.54  E-value=0.066  Score=47.45  Aligned_cols=76  Identities=20%  Similarity=0.259  Sum_probs=49.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC-EEEcCCCCC-ccHHHHHHHHcCCCccEEEE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHD-RPIQEVIAEMTNGGVDRSVE  271 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~-~vv~~~~~~-~~~~~~i~~~~~~g~Dvvid  271 (361)
                      .+.+++|+|+ |.+|...++.+...|..+|+.+++++++.+.   .+.. ..+..+-.+ .++.+.+...  +.+|++|.
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~vi~   79 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTDPASVAAAAEAA--SDVTILVN   79 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCCHHHHHHHHHhc--CCCCEEEE
Confidence            4578999987 9999999998888897679999888776543   3222 122222222 1122222221  25899999


Q ss_pred             ccCC
Q 018072          272 CTGN  275 (361)
Q Consensus       272 ~~g~  275 (361)
                      ++|.
T Consensus        80 ~ag~   83 (238)
T PRK08264         80 NAGI   83 (238)
T ss_pred             CCCc
Confidence            9876

>PRK05876 short chain dehydrogenase; Provisional

Probab=95.54  E-value=0.071  Score=48.76  Aligned_cols=80  Identities=21%  Similarity=0.219  Sum_probs=51.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHD-RPIQEVIAEMTN--GG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g  265 (361)
                      .+.++||+|+ |++|...+..+...|+ +|+.+++++++++.+.    ..+... .+..+-.+ .++.+.+.....  +.
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   83 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGH   83 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999987 9999999998888999 8988988877665432    234332 12222122 123333333221  36


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++|+++|.
T Consensus        84 id~li~nAg~   93 (275)
T PRK05876         84 VDVVFSNAGI   93 (275)
T ss_pred             CCEEEECCCc
Confidence            8999999873

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=95.54  E-value=0.11  Score=41.98  Aligned_cols=98  Identities=20%  Similarity=0.300  Sum_probs=56.9

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh-------------------hhHHH----HHHcCC-CEEEcCCCCC
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-------------------KRFEE----AKKFGV-TDFVNTSEHD  251 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~-------------------~~~~~----~~~~G~-~~vv~~~~~~  251 (361)
                      ..+|+|+|+|++|...+..+.+.|..+++.+|.+.                   .|.+.    ++++.. .++..+...-
T Consensus         2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~   81 (135)
T PF00899_consen    2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI   81 (135)
T ss_dssp             T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC
T ss_pred             CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc
Confidence            36899999999999999999899998898886542                   12222    233332 2222211110


Q ss_pred             ccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcE-EEEEc
Q 018072          252 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGV-AVLVG  297 (361)
Q Consensus       252 ~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~-iv~~g  297 (361)
                        -.+...++. .++|+||+|+.+........+.+... +. ++..+
T Consensus        82 --~~~~~~~~~-~~~d~vi~~~d~~~~~~~l~~~~~~~-~~p~i~~~  124 (135)
T PF00899_consen   82 --DEENIEELL-KDYDIVIDCVDSLAARLLLNEICREY-GIPFIDAG  124 (135)
T ss_dssp             --SHHHHHHHH-HTSSEEEEESSSHHHHHHHHHHHHHT-T-EEEEEE
T ss_pred             --ccccccccc-cCCCEEEEecCCHHHHHHHHHHHHHc-CCCEEEEE
Confidence              012222222 36899999998866555555555554 44 34433

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=95.53  E-value=0.13  Score=47.61  Aligned_cols=36  Identities=22%  Similarity=0.352  Sum_probs=31.8

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  230 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~  230 (361)
                      .+.+++|+|+|++|.+++..+...|+++|+++.+++
T Consensus       125 ~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~  160 (289)
T PRK12548        125 KGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD  160 (289)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence            467899999999999998888889997799999986

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.53  E-value=0.094  Score=47.46  Aligned_cols=79  Identities=16%  Similarity=0.257  Sum_probs=48.9

Q ss_pred             CCCEEEEEcC-C--HHHHHHHHHHHHcCCCeEEEEcCChh---hHHHH-HHcCCCEE--EcCCCCCccHHHHHHHHcC--
Q 018072          195 RGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSK---RFEEA-KKFGVTDF--VNTSEHDRPIQEVIAEMTN--  263 (361)
Q Consensus       195 ~g~~VlI~G~-g--~vG~~a~~~a~~~g~~~Vi~~~~~~~---~~~~~-~~~G~~~v--v~~~~~~~~~~~~i~~~~~--  263 (361)
                      .|.+++|+|+ +  ++|.+.++.+...|+ +|+..+++++   ..+.+ .+.|....  .|..+.+ ++.+.+.....  
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~-~v~~~~~~~~~~~   84 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPK-SISNLFDDIKEKW   84 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHH-HHHHHHHHHHHHc
Confidence            4678999988 4  799999888888898 7888877642   22222 22354332  2333322 24444443332  


Q ss_pred             CCccEEEEccCC
Q 018072          264 GGVDRSVECTGN  275 (361)
Q Consensus       264 ~g~Dvvid~~g~  275 (361)
                      +.+|++++++|.
T Consensus        85 g~iDilVnnag~   96 (260)
T PRK06603         85 GSFDFLLHGMAF   96 (260)
T ss_pred             CCccEEEEcccc
Confidence            369999998873

>PRK06125 short chain dehydrogenase; Provisional

Probab=95.52  E-value=0.082  Score=47.63  Aligned_cols=78  Identities=26%  Similarity=0.336  Sum_probs=50.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-----cCCC-EEEcCCCCC-ccHHHHHHHHcCCCc
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVT-DFVNTSEHD-RPIQEVIAEMTNGGV  266 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-----~G~~-~vv~~~~~~-~~~~~~i~~~~~~g~  266 (361)
                      .+.+++|+|+ +++|...++.+...|+ +|+++++++++.+.+.+     .+.. ..+..+-.+ ..+.+.+...  +.+
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~--g~i   82 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEA--GDI   82 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHh--CCC
Confidence            3689999988 8999999998888899 89999998877655332     2322 222222222 1122222221  379


Q ss_pred             cEEEEccCC
Q 018072          267 DRSVECTGN  275 (361)
Q Consensus       267 Dvvid~~g~  275 (361)
                      |++|+++|.
T Consensus        83 d~lv~~ag~   91 (259)
T PRK06125         83 DILVNNAGA   91 (259)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=95.52  E-value=0.076  Score=48.40  Aligned_cols=79  Identities=23%  Similarity=0.328  Sum_probs=50.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHD-RPIQEVIAEMTN--GG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g  265 (361)
                      .+.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+.    +.+... .+..+-.+ .++...+.....  +.
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   87 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGP   87 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999987 9999999998888999 8999988876654432    233322 22222122 123333333222  37


Q ss_pred             ccEEEEccC
Q 018072          266 VDRSVECTG  274 (361)
Q Consensus       266 ~Dvvid~~g  274 (361)
                      +|++|+++|
T Consensus        88 id~li~~ag   96 (278)
T PRK08277         88 CDILINGAG   96 (278)
T ss_pred             CCEEEECCC
Confidence            899999987

>PRK08328 hypothetical protein; Provisional

Probab=95.51  E-value=0.073  Score=47.48  Aligned_cols=34  Identities=35%  Similarity=0.488  Sum_probs=30.2

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  229 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~  229 (361)
                      +.+|+|+|+|++|..++..+...|..+++.+|.+
T Consensus        27 ~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D   60 (231)
T PRK08328         27 KAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQ   60 (231)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            4689999999999999999999999899888754

>PRK05875 short chain dehydrogenase; Provisional

Probab=95.50  E-value=0.082  Score=48.11  Aligned_cols=79  Identities=20%  Similarity=0.388  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-H---cC--CC-EEE--cCCCCCccHHHHHHHHcC-
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-K---FG--VT-DFV--NTSEHDRPIQEVIAEMTN-  263 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~---~G--~~-~vv--~~~~~~~~~~~~i~~~~~-  263 (361)
                      ++.++||+|+ |++|...++.+...|+ +|+.+++++++.+... +   .+  .. .++  |..+. ..+.+.+..... 
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~   83 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDE-DQVARAVDAATAW   83 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCH-HHHHHHHHHHHHH
Confidence            3679999998 9999999999988999 8999988877654332 2   11  11 122  22221 123333333322 


Q ss_pred             -CCccEEEEccCC
Q 018072          264 -GGVDRSVECTGN  275 (361)
Q Consensus       264 -~g~Dvvid~~g~  275 (361)
                       +++|++|+++|.
T Consensus        84 ~~~~d~li~~ag~   96 (276)
T PRK05875         84 HGRLHGVVHCAGG   96 (276)
T ss_pred             cCCCCEEEECCCc
Confidence             368999999873

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=95.49  E-value=0.088  Score=46.74  Aligned_cols=80  Identities=20%  Similarity=0.221  Sum_probs=51.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCCE-EEcCCCCC-ccHHHHHHHHcC--CCccE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD-FVNTSEHD-RPIQEVIAEMTN--GGVDR  268 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g~Dv  268 (361)
                      ++.+++|+|+ |.+|...+..+...|. .|+..+++.++++.+. +++... .+..+-.+ ..+.+.+.+...  +++|+
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI   83 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            3678999997 9999999998888898 8888888877766543 344322 22222111 123333332221  36899


Q ss_pred             EEEccCC
Q 018072          269 SVECTGN  275 (361)
Q Consensus       269 vid~~g~  275 (361)
                      +|+++|.
T Consensus        84 vi~~ag~   90 (245)
T PRK12936         84 LVNNAGI   90 (245)
T ss_pred             EEECCCC
Confidence            9999874

>TIGR00417 speE spermidine synthase

Probab=95.49  E-value=0.13  Score=46.98  Aligned_cols=99  Identities=19%  Similarity=0.131  Sum_probs=62.2

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC-------EEEcCCCCCccHHHHHHHHcCCCc
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-------DFVNTSEHDRPIQEVIAEMTNGGV  266 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~-------~vv~~~~~~~~~~~~i~~~~~~g~  266 (361)
                      +.+++||++|+|. |..+..+++.....++++++.+++-.+.++++-..       .-++....+  ..+.++.. .+.+
T Consensus        71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D--~~~~l~~~-~~~y  146 (270)
T TIGR00417        71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDD--GFKFLADT-ENTF  146 (270)
T ss_pred             CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECc--hHHHHHhC-CCCc
Confidence            3456999998865 44555666665556899999999888877663110       001111112  33334332 3479


Q ss_pred             cEEEEccC----------ChHHHHHHHHHhcCCCcEEEEEc
Q 018072          267 DRSVECTG----------NIDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       267 Dvvid~~g----------~~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      |+|+-...          ..+.++.+.+.|+++ |.++...
T Consensus       147 DvIi~D~~~~~~~~~~l~~~ef~~~~~~~L~pg-G~lv~~~  186 (270)
T TIGR00417       147 DVIIVDSTDPVGPAETLFTKEFYELLKKALNED-GIFVAQS  186 (270)
T ss_pred             cEEEEeCCCCCCcccchhHHHHHHHHHHHhCCC-cEEEEcC
Confidence            99986443          234567888999998 9998774

the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.

>PRK14103 trans-aconitate 2-methyltransferase; Provisional

Probab=95.49  E-value=0.097  Score=47.32  Aligned_cols=96  Identities=23%  Similarity=0.241  Sum_probs=68.3

Q ss_pred             hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHc-CCC
Q 018072          188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT-NGG  265 (361)
Q Consensus       188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~-g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~-~~g  265 (361)
                      ......+++.+||=+|+|. |..+..+++.. +. +|+++|.+++-++.+++.+.+.+.    .+  ..    .+. .+.
T Consensus        22 l~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~~----~d--~~----~~~~~~~   89 (255)
T PRK14103         22 LARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDART----GD--VR----DWKPKPD   89 (255)
T ss_pred             HHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEEE----cC--hh----hCCCCCC
Confidence            4556678889999999876 67777787775 44 899999999999988876654322    11  11    122 237


Q ss_pred             ccEEEEccC-----C-hHHHHHHHHHhcCCCcEEEEE
Q 018072          266 VDRSVECTG-----N-IDNMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       266 ~Dvvid~~g-----~-~~~~~~~~~~l~~~~G~iv~~  296 (361)
                      ||+|+....     . ...+..+.+.|+++ |++++.
T Consensus        90 fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~l~~~  125 (255)
T PRK14103         90 TDVVVSNAALQWVPEHADLLVRWVDELAPG-SWIAVQ  125 (255)
T ss_pred             ceEEEEehhhhhCCCHHHHHHHHHHhCCCC-cEEEEE
Confidence            999998542     2 34577888999997 998765

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.47  E-value=0.081  Score=50.83  Aligned_cols=35  Identities=29%  Similarity=0.284  Sum_probs=31.9

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  229 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~  229 (361)
                      ...+|+|+|+|++|..++..+...|..+++.+|.+
T Consensus       134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD  168 (376)
T ss_pred             hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            45689999999999999999999999999999887

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=95.47  E-value=0.1  Score=47.70  Aligned_cols=94  Identities=21%  Similarity=0.198  Sum_probs=59.4

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-Hc---CCCEEEcCCCCCccHHHHHHHHcCCCccE
Q 018072          193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF---GVTDFVNTSEHDRPIQEVIAEMTNGGVDR  268 (361)
Q Consensus       193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~---G~~~vv~~~~~~~~~~~~i~~~~~~g~Dv  268 (361)
                      ...+.+++|+|+|++|.+.+..+...|. +|+++++++++.+.+. ++   +....+.       ..+    .....+|+
T Consensus       114 ~~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~~-------~~~----~~~~~~Di  181 (270)
T TIGR00507       114 LRPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAFS-------MDE----LPLHRVDL  181 (270)
T ss_pred             CccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEec-------hhh----hcccCccE
Confidence            3457899999999999999988888897 8999999988765543 33   2111111       111    11126899


Q ss_pred             EEEccCChH--HH---HHHHHHhcCCCcEEEEEcCC
Q 018072          269 SVECTGNID--NM---ISAFECVHDGWGVAVLVGVP  299 (361)
Q Consensus       269 vid~~g~~~--~~---~~~~~~l~~~~G~iv~~g~~  299 (361)
                      ||++++...  ..   ......++++ ..++.+...
T Consensus       182 vInatp~gm~~~~~~~~~~~~~l~~~-~~v~D~~y~  216 (270)
T TIGR00507       182 IINATSAGMSGNIDEPPVPAEKLKEG-MVVYDMVYN  216 (270)
T ss_pred             EEECCCCCCCCCCCCCCCCHHHcCCC-CEEEEeccC
Confidence            999987521  11   1123456665 666666543

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=95.46  E-value=0.12  Score=45.90  Aligned_cols=74  Identities=27%  Similarity=0.391  Sum_probs=55.2

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH--cCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK--FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  275 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~--~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~  275 (361)
                      +++|+|+|.+|...++.+...|. .|++++.++++.+...+  ++.. ++.-+..+   .+.+++.--..+|+++-++|+
T Consensus         2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~~-~v~gd~t~---~~~L~~agi~~aD~vva~t~~   76 (225)
T COG0569           2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDTH-VVIGDATD---EDVLEEAGIDDADAVVAATGN   76 (225)
T ss_pred             EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcceE-EEEecCCC---HHHHHhcCCCcCCEEEEeeCC
Confidence            58899999999999999999998 89999999999887433  5543 33333332   234555433379999999998


Q ss_pred             h
Q 018072          276 I  276 (361)
Q Consensus       276 ~  276 (361)
                      .
T Consensus        77 d   77 (225)
T COG0569          77 D   77 (225)
T ss_pred             C
Confidence            3

>PRK01683 trans-aconitate 2-methyltransferase; Provisional

Probab=95.45  E-value=0.1  Score=47.16  Aligned_cols=99  Identities=22%  Similarity=0.227  Sum_probs=66.8

Q ss_pred             hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC-EEEcCCCCCccHHHHHHHHcCCCc
Q 018072          188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNGGV  266 (361)
Q Consensus       188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~-~vv~~~~~~~~~~~~i~~~~~~g~  266 (361)
                      .....++++++||=+|+|. |..+..+++..+..+|+++|.+++.++.+++.-.. .++..   +  ..+.   .....+
T Consensus        24 l~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~---d--~~~~---~~~~~f   94 (258)
T PRK01683         24 LARVPLENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEA---D--IASW---QPPQAL   94 (258)
T ss_pred             HhhCCCcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEEC---c--hhcc---CCCCCc
Confidence            3455678899999999875 67777888776544999999999988888764321 12211   1  1100   122378


Q ss_pred             cEEEEccC------ChHHHHHHHHHhcCCCcEEEEE
Q 018072          267 DRSVECTG------NIDNMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       267 Dvvid~~g------~~~~~~~~~~~l~~~~G~iv~~  296 (361)
                      |+|+....      ....+..+.+.|+++ |.+++.
T Consensus        95 D~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~~~~~  129 (258)
T PRK01683         95 DLIFANASLQWLPDHLELFPRLVSLLAPG-GVLAVQ  129 (258)
T ss_pred             cEEEEccChhhCCCHHHHHHHHHHhcCCC-cEEEEE
Confidence            99986543      224677888999997 998875

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=95.45  E-value=0.098  Score=46.94  Aligned_cols=80  Identities=23%  Similarity=0.317  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHD-RPIQEVIAEMTN--GG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g  265 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.    ..+... .+..+-.+ ..+.+.+.....  ++
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   86 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGP   86 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence            4678999988 9999999998888898 8999999877655432    223322 22222222 123333333222  36


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|+++++.|.
T Consensus        87 id~vi~~ag~   96 (254)
T PRK08085         87 IDVLINNAGI   96 (254)
T ss_pred             CCEEEECCCc
Confidence            8999999974

>PRK08251 short chain dehydrogenase; Provisional

Probab=95.44  E-value=0.09  Score=46.92  Aligned_cols=77  Identities=26%  Similarity=0.452  Sum_probs=49.9

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----c--CCC-EEE--cCCCCCccHHHHHHHHcC--
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----F--GVT-DFV--NTSEHDRPIQEVIAEMTN--  263 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~--G~~-~vv--~~~~~~~~~~~~i~~~~~--  263 (361)
                      +.+++|+|+ |++|...++.+...|. +|+.+++++++.+.+.+    .  +.. +++  |..+. ..+.+.+..+..  
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~   79 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDH-DQVFEVFAEFRDEL   79 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCH-HHHHHHHHHHHHHc
Confidence            468999987 9999998888778887 89999898877655432    1  222 122  22222 123333333322  


Q ss_pred             CCccEEEEccC
Q 018072          264 GGVDRSVECTG  274 (361)
Q Consensus       264 ~g~Dvvid~~g  274 (361)
                      +++|++|+++|
T Consensus        80 ~~id~vi~~ag   90 (248)
T PRK08251         80 GGLDRVIVNAG   90 (248)
T ss_pred             CCCCEEEECCC
Confidence            37899999987

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=95.43  E-value=0.09  Score=46.89  Aligned_cols=79  Identities=22%  Similarity=0.258  Sum_probs=51.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FVNTSEHD-RPIQEVIAEMTN--GG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g  265 (361)
                      ++.++||+|+ |.+|...++.+...|. +|+.++++.++.+.+.+    .+... ++..+-.+ ..+.+.+.....  ++
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   80 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP   80 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            3678999998 9999999998888898 89999888876554432    23222 22222222 123333333322  36


Q ss_pred             ccEEEEccC
Q 018072          266 VDRSVECTG  274 (361)
Q Consensus       266 ~Dvvid~~g  274 (361)
                      +|++|.+.|
T Consensus        81 ~d~vi~~ag   89 (250)
T TIGR03206        81 VDVLVNNAG   89 (250)
T ss_pred             CCEEEECCC
Confidence            899999997

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PLN02823 spermine synthase

Probab=95.43  E-value=0.15  Score=47.99  Aligned_cols=98  Identities=14%  Similarity=0.133  Sum_probs=62.8

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCC-C-EEE-----cCCCCCccHHHHHHHHcCCCcc
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV-T-DFV-----NTSEHDRPIQEVIAEMTNGGVD  267 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~-~-~vv-----~~~~~~~~~~~~i~~~~~~g~D  267 (361)
                      ...+|||+|+|. |..+..+++..+..+|++++.+++-.+.++++-. . ..+     .....|  ..+.++. .++.||
T Consensus       103 ~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~D--a~~~L~~-~~~~yD  178 (336)
T PLN02823        103 NPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIIND--ARAELEK-RDEKFD  178 (336)
T ss_pred             CCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEECh--hHHHHhh-CCCCcc
Confidence            447899998864 5556677776666799999999999999987421 1 001     111111  3334432 334899


Q ss_pred             EEEEccCC------------hHHHH-HHHHHhcCCCcEEEEEc
Q 018072          268 RSVECTGN------------IDNMI-SAFECVHDGWGVAVLVG  297 (361)
Q Consensus       268 vvid~~g~------------~~~~~-~~~~~l~~~~G~iv~~g  297 (361)
                      +||--+..            .+.++ .+.+.|+++ |.++.-.
T Consensus       179 vIi~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~-Gvlv~q~  220 (336)
T PLN02823        179 VIIGDLADPVEGGPCYQLYTKSFYERIVKPKLNPG-GIFVTQA  220 (336)
T ss_pred             EEEecCCCccccCcchhhccHHHHHHHHHHhcCCC-cEEEEec
Confidence            99875322            12455 678899998 9887653

>PRK08219 short chain dehydrogenase; Provisional

Probab=95.43  E-value=0.16  Score=44.46  Aligned_cols=74  Identities=19%  Similarity=0.185  Sum_probs=46.9

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCEEEcCCCCCccHHHHHHHHcCC--CccEEEEc
Q 018072          197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNG--GVDRSVEC  272 (361)
Q Consensus       197 ~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~vv~~~~~~~~~~~~i~~~~~~--g~Dvvid~  272 (361)
                      .++||+|+ |.+|...+..+... . +|++++++.++.+.+.+ ....+++..+-.+  . +.+.++..+  +.|.+|++
T Consensus         4 ~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~-~~~~~~~~~~~~id~vi~~   78 (227)
T PRK08219          4 PTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVDLTD--P-EAIAAAVEQLGRLDVLVHN   78 (227)
T ss_pred             CEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecCCCC--H-HHHHHHHHhcCCCCEEEEC
Confidence            57999987 99999888866666 6 89999998877665543 2112223222222  1 233333322  69999999


Q ss_pred             cCC
Q 018072          273 TGN  275 (361)
Q Consensus       273 ~g~  275 (361)
                      +|.
T Consensus        79 ag~   81 (227)
T PRK08219         79 AGV   81 (227)
T ss_pred             CCc
Confidence            874

>PRK06940 short chain dehydrogenase; Provisional

Probab=95.42  E-value=0.2  Score=45.80  Aligned_cols=76  Identities=26%  Similarity=0.379  Sum_probs=48.3

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-E--EcCCCCCccHHHHHHHHc-CCCccE
Q 018072          197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-F--VNTSEHDRPIQEVIAEMT-NGGVDR  268 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-v--v~~~~~~~~~~~~i~~~~-~~g~Dv  268 (361)
                      .+++|+|+|++|...+..+. .|. +|+.+++++++++.+.    ..|... .  .|..+.+ ++.+.+.... .+++|+
T Consensus         3 k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~-~i~~~~~~~~~~g~id~   79 (275)
T PRK06940          3 EVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRE-SVKALAATAQTLGPVTG   79 (275)
T ss_pred             CEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHH-HHHHHHHHHHhcCCCCE
Confidence            56788899999999888774 787 8999999877665432    234322 2  2333322 2333333331 137999


Q ss_pred             EEEccCC
Q 018072          269 SVECTGN  275 (361)
Q Consensus       269 vid~~g~  275 (361)
                      +|+++|.
T Consensus        80 li~nAG~   86 (275)
T PRK06940         80 LVHTAGV   86 (275)
T ss_pred             EEECCCc
Confidence            9999984

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.42  E-value=0.058  Score=45.19  Aligned_cols=47  Identities=28%  Similarity=0.309  Sum_probs=39.9

Q ss_pred             CCCEEEEEcCC-HHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC
Q 018072          195 RGSSVAVFGLG-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT  242 (361)
Q Consensus       195 ~g~~VlI~G~g-~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~  242 (361)
                      .|..|++.|+| ++|...++-+...|+ +|+++.++++.+..+.+.-..
T Consensus         6 aG~~vlvTgagaGIG~~~v~~La~aGA-~ViAvaR~~a~L~sLV~e~p~   53 (245)
T KOG1207|consen    6 AGVIVLVTGAGAGIGKEIVLSLAKAGA-QVIAVARNEANLLSLVKETPS   53 (245)
T ss_pred             cceEEEeecccccccHHHHHHHHhcCC-EEEEEecCHHHHHHHHhhCCc
Confidence            47788999984 999999999999999 999999999988887665443

>PRK09242 tropinone reductase; Provisional

Probab=95.42  E-value=0.083  Score=47.49  Aligned_cols=79  Identities=19%  Similarity=0.284  Sum_probs=51.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-c-----CCCE-EE--cCCCCCccHHHHHHHHcC-
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F-----GVTD-FV--NTSEHDRPIQEVIAEMTN-  263 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~-----G~~~-vv--~~~~~~~~~~~~i~~~~~-  263 (361)
                      .+.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+.+ +     +... .+  |..+. .++.+.+..... 
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~   85 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSDD-EDRRAILDWVEDH   85 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCH-HHHHHHHHHHHHH
Confidence            4779999988 8999999999888998 89999898877655432 1     2222 12  22222 123333333221 


Q ss_pred             -CCccEEEEccCC
Q 018072          264 -GGVDRSVECTGN  275 (361)
Q Consensus       264 -~g~Dvvid~~g~  275 (361)
                       +++|+++.+.|.
T Consensus        86 ~g~id~li~~ag~   98 (257)
T PRK09242         86 WDGLHILVNNAGG   98 (257)
T ss_pred             cCCCCEEEECCCC
Confidence             378999999984

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=95.42  E-value=0.065  Score=44.56  Aligned_cols=79  Identities=28%  Similarity=0.344  Sum_probs=49.6

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCC--hhhHHHH----HHcCCCE-EEcCCCCC-ccHHHHHHHHc--CCC
Q 018072          197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS--SKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMT--NGG  265 (361)
Q Consensus       197 ~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~--~~~~~~~----~~~G~~~-vv~~~~~~-~~~~~~i~~~~--~~g  265 (361)
                      ++++|+|+ +++|...++.+...|..+|+.+.++  .++.+.+    +..+... ++..+-.+ .++.+.+....  .+.
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            36899987 9999998888877777688999888  4443333    3345322 22222222 22344444333  237


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++|.+.|.
T Consensus        81 ld~li~~ag~   90 (167)
T PF00106_consen   81 LDILINNAGI   90 (167)
T ss_dssp             ESEEEEECSC
T ss_pred             cccccccccc
Confidence            8999999885

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=95.41  E-value=0.083  Score=48.30  Aligned_cols=80  Identities=28%  Similarity=0.337  Sum_probs=53.2

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCC------EEEcCCCCCccHHHHHH---
Q 018072          194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT------DFVNTSEHDRPIQEVIA---  259 (361)
Q Consensus       194 ~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~------~vv~~~~~~~~~~~~i~---  259 (361)
                      -.|..++|+|+ .++|.+.+..+...|+ +|+.+++++++.+...+    .+..      .+.|....+ +..+.+.   
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~~~~l~~~~~   83 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEV-DVEKLVEFAV   83 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHH-HHHHHHHHHH
Confidence            35788899987 8999999999999999 99999999988666543    2332      122222221 1222222   


Q ss_pred             HHcCCCccEEEEccCC
Q 018072          260 EMTNGGVDRSVECTGN  275 (361)
Q Consensus       260 ~~~~~g~Dvvid~~g~  275 (361)
                      +...++.|+.+++.|.
T Consensus        84 ~~~~GkidiLvnnag~   99 (270)
T KOG0725|consen   84 EKFFGKIDILVNNAGA   99 (270)
T ss_pred             HHhCCCCCEEEEcCCc
Confidence            2223579999998874

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.41  E-value=0.28  Score=46.01  Aligned_cols=39  Identities=18%  Similarity=0.227  Sum_probs=33.7

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 018072          197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA  236 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~  236 (361)
                      .+|.|+|+|.+|...++.+...|. .|+..|.+++..+.+
T Consensus         8 ~~VaVIGaG~MG~giA~~~a~aG~-~V~l~D~~~~~~~~~   46 (321)
T PRK07066          8 KTFAAIGSGVIGSGWVARALAHGL-DVVAWDPAPGAEAAL   46 (321)
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHH
Confidence            579999999999999888888999 999999998765543

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=95.41  E-value=0.21  Score=44.24  Aligned_cols=103  Identities=19%  Similarity=0.261  Sum_probs=62.0

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh-------------------hhHHHH----HHcCCCEEEcCCCCCc
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-------------------KRFEEA----KKFGVTDFVNTSEHDR  252 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~-------------------~~~~~~----~~~G~~~vv~~~~~~~  252 (361)
                      ..+|+|+|.|+||..++..+.+.|..++..+|-+.                   .|.+.+    ++.+...-+...+ +.
T Consensus        30 ~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~-~f  108 (263)
T COG1179          30 QAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIN-DF  108 (263)
T ss_pred             hCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehH-hh
Confidence            46899999999999999999999998888886543                   122222    2222222111111 11


Q ss_pred             cHHHHHHHHcCCCccEEEEccCChHHHHHHHH-HhcCCCcEEEEEcCCC
Q 018072          253 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFE-CVHDGWGVAVLVGVPS  300 (361)
Q Consensus       253 ~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~-~l~~~~G~iv~~g~~~  300 (361)
                      -..+.+.++...++|.|+|+.-+-..=...+. +.+.. =.++..+...
T Consensus       109 ~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~k-i~vIss~Gag  156 (263)
T COG1179         109 ITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNK-IPVISSMGAG  156 (263)
T ss_pred             hCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcC-CCEEeecccc
Confidence            12345556666689999999976444334444 44443 4555555433

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.40  E-value=0.16  Score=48.39  Aligned_cols=35  Identities=31%  Similarity=0.356  Sum_probs=31.4

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  230 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~  230 (361)
                      ..+|+|+|+|++|..+++.+.+.|..+++.+|.+.
T Consensus        28 ~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~   62 (355)
T PRK05597         28 DAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT   62 (355)
T ss_pred             CCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            46899999999999999999999999999987764

>PRK07577 short chain dehydrogenase; Provisional

Probab=95.40  E-value=0.074  Score=46.95  Aligned_cols=73  Identities=23%  Similarity=0.286  Sum_probs=48.2

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC-EEEcCCCCCccHHHHHHHHcCC-CccEEEEc
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNG-GVDRSVEC  272 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~-~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~  272 (361)
                      +.+++|+|+ |++|...++.+...|. +|+.+++++++     .+... ...|..+.+ .+.+.+...... +.|++|.+
T Consensus         3 ~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~-----~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~d~vi~~   75 (234)
T PRK07577          3 SRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAID-----DFPGELFACDLADIE-QTAATLAQINEIHPVDAIVNN   75 (234)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCccc-----ccCceEEEeeCCCHH-HHHHHHHHHHHhCCCcEEEEC
Confidence            578999988 9999999998888898 89999887664     11211 122332221 233344443333 68999998


Q ss_pred             cCC
Q 018072          273 TGN  275 (361)
Q Consensus       273 ~g~  275 (361)
                      .|.
T Consensus        76 ag~   78 (234)
T PRK07577         76 VGI   78 (234)
T ss_pred             CCC
Confidence            874

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.38  E-value=0.11  Score=47.01  Aligned_cols=80  Identities=18%  Similarity=0.268  Sum_probs=48.0

Q ss_pred             CCCEEEEEcC---CHHHHHHHHHHHHcCCCeEEEEcCChhh---HHHHH-HcCCCEEEcCCCCC-ccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSSKR---FEEAK-KFGVTDFVNTSEHD-RPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~---g~vG~~a~~~a~~~g~~~Vi~~~~~~~~---~~~~~-~~G~~~vv~~~~~~-~~~~~~i~~~~~--~  264 (361)
                      .+.++||+|+   +++|.+.++.+...|+ +|+.+.++++.   ++.+. +.|....+..+-.+ +++.+.+.....  +
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   83 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWD   83 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhC
Confidence            4678999984   5899999998888999 78877655432   22222 23432222222222 224334433322  3


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      ++|++++++|.
T Consensus        84 ~iD~lVnnAG~   94 (261)
T PRK08690         84 GLDGLVHSIGF   94 (261)
T ss_pred             CCcEEEECCcc
Confidence            79999999874

>PRK06398 aldose dehydrogenase; Validated

Probab=95.38  E-value=0.055  Score=48.90  Aligned_cols=74  Identities=20%  Similarity=0.280  Sum_probs=48.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC-EEEcCCCCCccHHHHHHHHcC--CCccEEE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTN--GGVDRSV  270 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~-~vv~~~~~~~~~~~~i~~~~~--~g~Dvvi  270 (361)
                      .|.++||+|+ +++|...+..+...|+ +|+.+++++++..     ... ...|..+.+ ++.+.+.....  +.+|++|
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~~~~~~D~~~~~-~i~~~~~~~~~~~~~id~li   77 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DVDYFKVDVSNKE-QVIKGIDYVISKYGRIDILV   77 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ceEEEEccCCCHH-HHHHHHHHHHHHcCCCCEEE
Confidence            3679999998 8999999999988998 8998888765432     111 112333321 23334443322  3689999


Q ss_pred             EccCC
Q 018072          271 ECTGN  275 (361)
Q Consensus       271 d~~g~  275 (361)
                      ++.|.
T Consensus        78 ~~Ag~   82 (258)
T PRK06398         78 NNAGI   82 (258)
T ss_pred             ECCCC
Confidence            98873

>PRK06914 short chain dehydrogenase; Provisional

Probab=95.35  E-value=0.1  Score=47.58  Aligned_cols=77  Identities=17%  Similarity=0.256  Sum_probs=49.9

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCC--C-EEE--cCCCCCccHHHHHHHHcC--
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGV--T-DFV--NTSEHDRPIQEVIAEMTN--  263 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~--~-~vv--~~~~~~~~~~~~i~~~~~--  263 (361)
                      +.++||+|+ |.+|...+..+...|+ +|+++++++++.+.+.+    .+.  . ..+  |..+.+ ++.+ +.+...  
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~-~~~~-~~~~~~~~   79 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQN-SIHN-FQLVLKEI   79 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHH-HHHH-HHHHHHhc
Confidence            567999998 9999999998888898 89999888776654432    222  1 122  222221 2333 333322  


Q ss_pred             CCccEEEEccCC
Q 018072          264 GGVDRSVECTGN  275 (361)
Q Consensus       264 ~g~Dvvid~~g~  275 (361)
                      +++|+++.++|.
T Consensus        80 ~~id~vv~~ag~   91 (280)
T PRK06914         80 GRIDLLVNNAGY   91 (280)
T ss_pred             CCeeEEEECCcc
Confidence            368999999874

>PRK07340 ornithine cyclodeaminase; Validated

Probab=95.33  E-value=0.11  Score=48.44  Aligned_cols=102  Identities=17%  Similarity=0.100  Sum_probs=67.8

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHH-cCCCeEEEEcCChhhHHHHH-HcC---CCEEEcCCCCCccHHHHHHHHcCCCccE
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARI-AGASRIIGVDRSSKRFEEAK-KFG---VTDFVNTSEHDRPIQEVIAEMTNGGVDR  268 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~-~g~~~Vi~~~~~~~~~~~~~-~~G---~~~vv~~~~~~~~~~~~i~~~~~~g~Dv  268 (361)
                      ....+++|+|+|..|.+.++.+.. .+.++|.+.++++++.+.+. ++.   ....  .  .+  ..+.+     .++|+
T Consensus       123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~--~--~~--~~~av-----~~aDi  191 (304)
T PRK07340        123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE--P--LD--GEAIP-----EAVDL  191 (304)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE--E--CC--HHHHh-----hcCCE
Confidence            456789999999999998887754 67778999999988766543 342   2211  1  11  33333     26899


Q ss_pred             EEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChh
Q 018072          269 SVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI  310 (361)
Q Consensus       269 vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~  310 (361)
                      |+.++.+...+-..  .++++ --++.+|... +..-.+++.
T Consensus       192 VitaT~s~~Pl~~~--~~~~g-~hi~~iGs~~-p~~~El~~~  229 (304)
T PRK07340        192 VVTATTSRTPVYPE--AARAG-RLVVAVGAFT-PDMAELAPR  229 (304)
T ss_pred             EEEccCCCCceeCc--cCCCC-CEEEecCCCC-CCcccCCHH
Confidence            99999886654444  36775 6778888655 333444444

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=95.31  E-value=0.096  Score=50.40  Aligned_cols=96  Identities=24%  Similarity=0.322  Sum_probs=65.6

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHH-HHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  273 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~-~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~  273 (361)
                      .+.++||+|+|-+|.+++..+...|...|+..-|+.+|.+. ++++|+.. +.       +.+....+  ..+|+||.++
T Consensus       177 ~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~-~~-------l~el~~~l--~~~DvVissT  246 (414)
T COG0373         177 KDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEA-VA-------LEELLEAL--AEADVVISST  246 (414)
T ss_pred             ccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCee-ec-------HHHHHHhh--hhCCEEEEec
Confidence            67899999999999999999999998899999998887654 56788432 22       21111112  1589999999


Q ss_pred             CChHHH---HHHHHHhcCCCc-EEEEEcCCC
Q 018072          274 GNIDNM---ISAFECVHDGWG-VAVLVGVPS  300 (361)
Q Consensus       274 g~~~~~---~~~~~~l~~~~G-~iv~~g~~~  300 (361)
                      +.+..+   ....+.++.... -++.++.+.
T Consensus       247 sa~~~ii~~~~ve~a~~~r~~~livDiavPR  277 (414)
T COG0373         247 SAPHPIITREMVERALKIRKRLLIVDIAVPR  277 (414)
T ss_pred             CCCccccCHHHHHHHHhcccCeEEEEecCCC
Confidence            886632   344445554313 355666654

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=95.29  E-value=0.12  Score=46.49  Aligned_cols=80  Identities=21%  Similarity=0.304  Sum_probs=49.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChh--hHHHHHHcCCCE-EEcCCCCC-ccHHHHHHHHcC--CCcc
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK--RFEEAKKFGVTD-FVNTSEHD-RPIQEVIAEMTN--GGVD  267 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~--~~~~~~~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g~D  267 (361)
                      .|.++||+|+ |++|...++.+...|+ +|+.+++++.  ..+.+++++... .+..+-.+ .++.+.+.+...  +.+|
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D   87 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHID   87 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            3679999988 8999999998888898 8888766542  233344444322 22222222 123333333222  3789


Q ss_pred             EEEEccCC
Q 018072          268 RSVECTGN  275 (361)
Q Consensus       268 vvid~~g~  275 (361)
                      ++|+++|.
T Consensus        88 ~li~~Ag~   95 (253)
T PRK08993         88 ILVNNAGL   95 (253)
T ss_pred             EEEECCCC
Confidence            99999874

>PRK06114 short chain dehydrogenase; Provisional

Probab=95.26  E-value=0.12  Score=46.40  Aligned_cols=80  Identities=19%  Similarity=0.257  Sum_probs=49.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChh-hHH----HHHHcCCCE-EEcCCCCC-ccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK-RFE----EAKKFGVTD-FVNTSEHD-RPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~-~~~----~~~~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~  264 (361)
                      .+.++||+|+ +++|...++.+...|+ +|+.++++++ ..+    .+++.+... .+..+-.+ ..+.+.+.....  +
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   85 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELG   85 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4678999987 8999999998888998 8888887653 222    223334322 22222222 123333333221  3


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      .+|++|++.|.
T Consensus        86 ~id~li~~ag~   96 (254)
T PRK06114         86 ALTLAVNAAGI   96 (254)
T ss_pred             CCCEEEECCCC
Confidence            68999999874

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=95.26  E-value=0.13  Score=46.34  Aligned_cols=79  Identities=18%  Similarity=0.212  Sum_probs=49.5

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-----cCCC--EEEcCCCCC-ccHHHHHHHHcC--C
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVT--DFVNTSEHD-RPIQEVIAEMTN--G  264 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-----~G~~--~vv~~~~~~-~~~~~~i~~~~~--~  264 (361)
                      +.++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+.+     .+..  ..+..+-.+ .++...+.+...  +
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~   80 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFG   80 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            468999988 8999999998888898 89999888766544321     2211  222222222 123333333221  3


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      ++|+++++.|.
T Consensus        81 ~id~vv~~ag~   91 (259)
T PRK12384         81 RVDLLVYNAGI   91 (259)
T ss_pred             CCCEEEECCCc
Confidence            78999999873

>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated

Probab=95.24  E-value=0.3  Score=41.85  Aligned_cols=101  Identities=18%  Similarity=0.182  Sum_probs=65.0

Q ss_pred             hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcC
Q 018072          188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN  263 (361)
Q Consensus       188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~  263 (361)
                      .....+.++++||=+|+|. |..++.+++.....+|+++|.+++.++.+++    ++...+- ....+  ...    ...
T Consensus        24 ~~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~-~~~~d--~~~----~~~   95 (187)
T PRK08287         24 LSKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNID-IIPGE--API----ELP   95 (187)
T ss_pred             HHhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeE-EEecC--chh----hcC
Confidence            3455677889999998865 6677777776543489999999988777754    4433211 11111  111    112


Q ss_pred             CCccEEEEccC---ChHHHHHHHHHhcCCCcEEEEEc
Q 018072          264 GGVDRSVECTG---NIDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       264 ~g~Dvvid~~g---~~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      +.+|+|+....   -...+..+.+.|+++ |++++..
T Consensus        96 ~~~D~v~~~~~~~~~~~~l~~~~~~Lk~g-G~lv~~~  131 (187)
T PRK08287         96 GKADAIFIGGSGGNLTAIIDWSLAHLHPG-GRLVLTF  131 (187)
T ss_pred             cCCCEEEECCCccCHHHHHHHHHHhcCCC-eEEEEEE
Confidence            37999986432   123567888999997 9987753

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=95.24  E-value=0.14  Score=43.52  Aligned_cols=33  Identities=24%  Similarity=0.240  Sum_probs=29.6

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  230 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~  230 (361)
                      +|+|+|+|++|...++.+.+.|..+++.+|.+.
T Consensus         1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            489999999999999999899998899998875

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=95.24  E-value=0.17  Score=42.17  Aligned_cols=84  Identities=17%  Similarity=0.156  Sum_probs=56.4

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC------EEEcCC-CCCccHHHHHHHHcCCCccEEE
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT------DFVNTS-EHDRPIQEVIAEMTNGGVDRSV  270 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~------~vv~~~-~~~~~~~~~i~~~~~~g~Dvvi  270 (361)
                      +|.|+|+|..|.+.+..+...|. +|....++++..+.+++-+..      ..+... ....++.+.+     .+.|+++
T Consensus         1 KI~ViGaG~~G~AlA~~la~~g~-~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~-----~~ad~Ii   74 (157)
T PF01210_consen    1 KIAVIGAGNWGTALAALLADNGH-EVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEAL-----EDADIII   74 (157)
T ss_dssp             EEEEESSSHHHHHHHHHHHHCTE-EEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHH-----TT-SEEE
T ss_pred             CEEEECcCHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHh-----CcccEEE
Confidence            58899999999999999999997 999999999888877663321      101100 0001133333     3579999


Q ss_pred             EccCChHHHHHHHHHhcC
Q 018072          271 ECTGNIDNMISAFECVHD  288 (361)
Q Consensus       271 d~~g~~~~~~~~~~~l~~  288 (361)
                      -++.+ ...+..++.+++
T Consensus        75 iavPs-~~~~~~~~~l~~   91 (157)
T PF01210_consen   75 IAVPS-QAHREVLEQLAP   91 (157)
T ss_dssp             E-S-G-GGHHHHHHHHTT
T ss_pred             ecccH-HHHHHHHHHHhh
Confidence            99988 667777777776

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PRK06720 hypothetical protein; Provisional

Probab=95.23  E-value=0.18  Score=42.64  Aligned_cols=80  Identities=21%  Similarity=0.177  Sum_probs=49.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCE-EEcCCCCC-ccHHHHHHHHc--CCC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMT--NGG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~-vv~~~~~~-~~~~~~i~~~~--~~g  265 (361)
                      .+.+++|+|+ +++|...+..+...|+ +|+.++++++..+..    .+.+... .+..+..+ ..+.+.+....  -++
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~   93 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSR   93 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4678999988 7999999888888898 899998887655332    2234332 22222222 11333332221  136


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++++++|.
T Consensus        94 iDilVnnAG~  103 (169)
T PRK06720         94 IDMLFQNAGL  103 (169)
T ss_pred             CCEEEECCCc
Confidence            8999988874

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=95.22  E-value=0.12  Score=46.32  Aligned_cols=79  Identities=22%  Similarity=0.338  Sum_probs=51.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCE-EE--cCCCCCccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~-vv--~~~~~~~~~~~~i~~~~~--~  264 (361)
                      ++.+++|+|+ |++|...+..+...|+ +|+.+++++++++.+    ++.+... .+  |..+.+ .+...+.....  +
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~-~~~~~~~~~~~~~~   87 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEE-AVAAAFARIDAEHG   87 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHH-HHHHHHHHHHHhcC
Confidence            4789999988 9999999988888898 899999987765443    2334322 22  222211 23333333222  3


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      .+|++|.++|.
T Consensus        88 ~id~vi~~ag~   98 (256)
T PRK06124         88 RLDILVNNVGA   98 (256)
T ss_pred             CCCEEEECCCC
Confidence            68999999884

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=95.22  E-value=0.012  Score=48.61  Aligned_cols=93  Identities=22%  Similarity=0.239  Sum_probs=56.0

Q ss_pred             EEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCC----CccHHHHHHHHcCCCccEEEEccC
Q 018072          199 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH----DRPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       199 VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~----~~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      |+|+|+|.+|.+.+..++..|. .|..+.+.+ +.+.+++.|........+.    .......  ....+.+|+||-|+=
T Consensus         1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~viv~vK   76 (151)
T PF02558_consen    1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP--SADAGPYDLVIVAVK   76 (151)
T ss_dssp             EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH--GHHHSTESEEEE-SS
T ss_pred             CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc--hhccCCCcEEEEEec
Confidence            6899999999998888877888 899998888 7777777665432221000    0000000  112237999999986


Q ss_pred             ChHHHHHHHHHhc----CCCcEEEEEc
Q 018072          275 NIDNMISAFECVH----DGWGVAVLVG  297 (361)
Q Consensus       275 ~~~~~~~~~~~l~----~~~G~iv~~g  297 (361)
                      .. ..+.+++.++    ++ ..++++-
T Consensus        77 a~-~~~~~l~~l~~~~~~~-t~iv~~q  101 (151)
T PF02558_consen   77 AY-QLEQALQSLKPYLDPN-TTIVSLQ  101 (151)
T ss_dssp             GG-GHHHHHHHHCTGEETT-EEEEEES
T ss_pred             cc-chHHHHHHHhhccCCC-cEEEEEe
Confidence            63 3344444444    44 4666553

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=95.21  E-value=0.21  Score=50.73  Aligned_cols=93  Identities=14%  Similarity=0.173  Sum_probs=64.4

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 018072          197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  276 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~  276 (361)
                      ++++|+|.|.+|+..++.++..|. .++++|.++++.+.+++.|...++-. ..+   .+.+++..-+.+|.++-+++++
T Consensus       418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~GD-~~~---~~~L~~a~i~~a~~viv~~~~~  492 (558)
T PRK10669        418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLGN-AAN---EEIMQLAHLDCARWLLLTIPNG  492 (558)
T ss_pred             CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEcC-CCC---HHHHHhcCccccCEEEEEcCCh
Confidence            688999999999999999999998 89999999999999999887655432 222   2233333223789888777664


Q ss_pred             HH---HHHHHHHhcCCCcEEEE
Q 018072          277 DN---MISAFECVHDGWGVAVL  295 (361)
Q Consensus       277 ~~---~~~~~~~l~~~~G~iv~  295 (361)
                      +.   +-.+.+...+. -+++.
T Consensus       493 ~~~~~iv~~~~~~~~~-~~iia  513 (558)
T PRK10669        493 YEAGEIVASAREKRPD-IEIIA  513 (558)
T ss_pred             HHHHHHHHHHHHHCCC-CeEEE
Confidence            33   22334444444 44443

>PRK04266 fibrillarin; Provisional

Probab=95.19  E-value=0.2  Score=44.47  Aligned_cols=102  Identities=16%  Similarity=0.156  Sum_probs=62.1

Q ss_pred             hhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCC--C--EEEcCCCCCccHHHHHHHHcCC
Q 018072          189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--T--DFVNTSEHDRPIQEVIAEMTNG  264 (361)
Q Consensus       189 ~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~--~--~vv~~~~~~~~~~~~i~~~~~~  264 (361)
                      +...+++|++||=+|+|. |..+..+++..+..+|+++|.+++.++.+.+...  .  ..+.-+..+  .. ....+. +
T Consensus        66 ~~l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~~~--~~-~~~~l~-~  140 (226)
T PRK04266         66 KNFPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADARK--PE-RYAHVV-E  140 (226)
T ss_pred             hhCCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCCCC--cc-hhhhcc-c
Confidence            457889999999998864 4455566666543489999999987765533211  1  112111111  00 001111 3


Q ss_pred             CccEEEEccCChH----HHHHHHHHhcCCCcEEEEE
Q 018072          265 GVDRSVECTGNID----NMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       265 g~Dvvid~~g~~~----~~~~~~~~l~~~~G~iv~~  296 (361)
                      .+|+|+.....+.    .+..+.+.|+++ |++++.
T Consensus       141 ~~D~i~~d~~~p~~~~~~L~~~~r~LKpG-G~lvI~  175 (226)
T PRK04266        141 KVDVIYQDVAQPNQAEIAIDNAEFFLKDG-GYLLLA  175 (226)
T ss_pred             cCCEEEECCCChhHHHHHHHHHHHhcCCC-cEEEEE
Confidence            5999996554432    357888899997 998874

>PRK06484 short chain dehydrogenase; Validated

Probab=95.17  E-value=0.11  Score=52.16  Aligned_cols=79  Identities=27%  Similarity=0.403  Sum_probs=54.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCCE---EEcCCCCCccHHHHHHHHcC--CCcc
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD---FVNTSEHDRPIQEVIAEMTN--GGVD  267 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~~~---vv~~~~~~~~~~~~i~~~~~--~g~D  267 (361)
                      .+.++||+|+ +++|...++.+...|+ +|+.++++.++++.+. +++...   ..|..+. .++.+.+.....  +++|
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~iD   81 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSDE-AQIREGFEQLHREFGRID   81 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCCH-HHHHHHHHHHHHHhCCCC
Confidence            5788999988 8999999999989998 8999999888776553 455432   2333322 224444433322  3799


Q ss_pred             EEEEccCC
Q 018072          268 RSVECTGN  275 (361)
Q Consensus       268 vvid~~g~  275 (361)
                      ++|+++|.
T Consensus        82 ~li~nag~   89 (520)
T PRK06484         82 VLVNNAGV   89 (520)
T ss_pred             EEEECCCc
Confidence            99999874

>TIGR00477 tehB tellurite resistance protein TehB

Probab=95.17  E-value=0.061  Score=46.62  Aligned_cols=99  Identities=15%  Similarity=0.126  Sum_probs=59.8

Q ss_pred             hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcC
Q 018072          188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN  263 (361)
Q Consensus       188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~  263 (361)
                      .+.....++.+||-+|+|. |..+..+++ .|. .|+++|.+++-++.+++    .+...  .....+  +.. . .+ +
T Consensus        23 ~~~~~~~~~~~vLDiGcG~-G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~v--~~~~~d--~~~-~-~~-~   92 (195)
T TIGR00477        23 REAVKTVAPCKTLDLGCGQ-GRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLPL--RTDAYD--INA-A-AL-N   92 (195)
T ss_pred             HHHhccCCCCcEEEeCCCC-CHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCCc--eeEecc--chh-c-cc-c
Confidence            3344445567899999865 666666665 476 89999999987776543    23321  111111  110 0 11 2


Q ss_pred             CCccEEEEcc-----CC---hHHHHHHHHHhcCCCcEEEEEc
Q 018072          264 GGVDRSVECT-----GN---IDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       264 ~g~Dvvid~~-----g~---~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      +.+|+|+.+.     ..   +..+..+.+.|+++ |.++.+.
T Consensus        93 ~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lli~~  133 (195)
T TIGR00477        93 EDYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPG-GYNLIVA  133 (195)
T ss_pred             CCCCEEEEecccccCCHHHHHHHHHHHHHHhCCC-cEEEEEE
Confidence            3699998642     11   24677888899998 9865553

Part of a tellurite-reducing operon tehA and tehB

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=95.16  E-value=0.055  Score=51.28  Aligned_cols=77  Identities=13%  Similarity=0.029  Sum_probs=48.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCC--CE-EEcCCCCCccHHHHHHHHcCC-CccE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGV--TD-FVNTSEHDRPIQEVIAEMTNG-GVDR  268 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~-~~~G~--~~-vv~~~~~~~~~~~~i~~~~~~-g~Dv  268 (361)
                      .|.+|||+|+ |.+|...++.+...|. +|+++++++...... ..++.  .. .+..+-.+   .+.+..+..+ ++|+
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~---~~~~~~~~~~~~~d~   78 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRD---AAKLRKAIAEFKPEI   78 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEccCCC---HHHHHHHHhhcCCCE
Confidence            4678999987 9999999999988998 899888776543221 22221  11 12111112   1233333333 6899


Q ss_pred             EEEccCC
Q 018072          269 SVECTGN  275 (361)
Q Consensus       269 vid~~g~  275 (361)
                      ||++++.
T Consensus        79 vih~A~~   85 (349)
T TIGR02622        79 VFHLAAQ   85 (349)
T ss_pred             EEECCcc
Confidence            9999873

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02244 tocopherol O-methyltransferase

Probab=95.16  E-value=0.12  Score=49.05  Aligned_cols=98  Identities=20%  Similarity=0.207  Sum_probs=63.7

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcCCCccEE
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRS  269 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvv  269 (361)
                      +++++||=+|+|. |..+..+++..|+ +|+++|.++...+.+++    .|...-+.....+  ..+ + .+.++.||+|
T Consensus       117 ~~~~~VLDiGCG~-G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D--~~~-~-~~~~~~FD~V  190 (340)
T PLN02244        117 KRPKRIVDVGCGI-GGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVAD--ALN-Q-PFEDGQFDLV  190 (340)
T ss_pred             CCCCeEEEecCCC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcC--ccc-C-CCCCCCccEE
Confidence            7889999999865 6677778887787 99999999987776654    2332111111111  000 0 1223479999


Q ss_pred             EEccC------ChHHHHHHHHHhcCCCcEEEEEcC
Q 018072          270 VECTG------NIDNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       270 id~~g------~~~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      +..-.      ....+..+.+.|+++ |++++...
T Consensus       191 ~s~~~~~h~~d~~~~l~e~~rvLkpG-G~lvi~~~  224 (340)
T PLN02244        191 WSMESGEHMPDKRKFVQELARVAAPG-GRIIIVTW  224 (340)
T ss_pred             EECCchhccCCHHHHHHHHHHHcCCC-cEEEEEEe
Confidence            86432      124677889999998 99988754

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=95.15  E-value=0.22  Score=44.40  Aligned_cols=75  Identities=25%  Similarity=0.290  Sum_probs=47.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCE-EEcCCCCC-ccHHHHHHHHcC--CCccEE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHD-RPIQEVIAEMTN--GGVDRS  269 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g~Dvv  269 (361)
                      .+.++||+|+ |.+|...+..+...|. +|++++++.     ....+... .+..+-.+ ..+.+.+.....  +.+|++
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL   80 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            3678999988 8999999998888898 899988876     12222221 22111111 123333333222  368999


Q ss_pred             EEccCC
Q 018072          270 VECTGN  275 (361)
Q Consensus       270 id~~g~  275 (361)
                      |++.|.
T Consensus        81 i~~ag~   86 (252)
T PRK08220         81 VNAAGI   86 (252)
T ss_pred             EECCCc
Confidence            999875

>PRK06101 short chain dehydrogenase; Provisional

Probab=95.15  E-value=0.19  Score=44.67  Aligned_cols=75  Identities=13%  Similarity=0.172  Sum_probs=48.3

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC-EE--EcCCCCCccHHHHHHHHcCCCccEEEEc
Q 018072          197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DF--VNTSEHDRPIQEVIAEMTNGGVDRSVEC  272 (361)
Q Consensus       197 ~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~-~v--v~~~~~~~~~~~~i~~~~~~g~Dvvid~  272 (361)
                      .+++|+|+ |++|...+..+...|+ +|+++++++++++.+.+.+.. ..  .|..+. .++.+.+.... ...|.++.+
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~-~~~d~~i~~   78 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQSANIFTLAFDVTDH-PGTKAALSQLP-FIPELWIFN   78 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCCCeEEEeeCCCH-HHHHHHHHhcc-cCCCEEEEc
Confidence            46899987 9999988887778898 899999999888776554321 22  222221 12333333321 246777766


Q ss_pred             cC
Q 018072          273 TG  274 (361)
Q Consensus       273 ~g  274 (361)
                      +|
T Consensus        79 ag   80 (240)
T PRK06101         79 AG   80 (240)
T ss_pred             Cc
Confidence            65

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.15  E-value=0.12  Score=45.83  Aligned_cols=79  Identities=19%  Similarity=0.353  Sum_probs=50.5

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCE-EEcCCCCC-ccHHHHHHHHcC--CCc
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMTN--GGV  266 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g~  266 (361)
                      +.+++|+|+ |++|...+..+...|. +|+.+++++++.+.+    +..+... ++..+-.+ ..+.+.++....  +++
T Consensus         7 ~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   85 (239)
T PRK07666          7 GKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI   85 (239)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence            578999987 8999999988888898 899999987765543    2233222 22222222 123333333222  378


Q ss_pred             cEEEEccCC
Q 018072          267 DRSVECTGN  275 (361)
Q Consensus       267 Dvvid~~g~  275 (361)
                      |++|.++|.
T Consensus        86 d~vi~~ag~   94 (239)
T PRK07666         86 DILINNAGI   94 (239)
T ss_pred             cEEEEcCcc
Confidence            999999874

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=95.14  E-value=0.38  Score=44.30  Aligned_cols=109  Identities=13%  Similarity=0.057  Sum_probs=71.9

Q ss_pred             CCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcC---C--CEEEcCCCCC--ccHHHHHHHHcCC
Q 018072          193 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG---V--TDFVNTSEHD--RPIQEVIAEMTNG  264 (361)
Q Consensus       193 ~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G---~--~~vv~~~~~~--~~~~~~i~~~~~~  264 (361)
                      .-++..|+|+|+ ++.|...+.-+...|. +|++..-+++..+.++..-   -  +...|...++  .+..+.+++..++
T Consensus        26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf-~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~  104 (322)
T KOG1610|consen   26 SLSDKAVLITGCDSGFGRLLAKKLDKKGF-RVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGE  104 (322)
T ss_pred             ccCCcEEEEecCCcHHHHHHHHHHHhcCC-EEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccc
Confidence            345667999999 9999999999999999 8888877777666654421   1  1234433332  2344555555555


Q ss_pred             -CccEEEEccCCh--------------------------HHHHHHHHHhcCCCcEEEEEcCCCCC
Q 018072          265 -GVDRSVECTGNI--------------------------DNMISAFECVHDGWGVAVLVGVPSKD  302 (361)
Q Consensus       265 -g~Dvvid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~g~~~~~  302 (361)
                       +.--+++++|-.                          ..-...+.++++..||++.++...+.
T Consensus       105 ~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR  169 (322)
T KOG1610|consen  105 DGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGR  169 (322)
T ss_pred             ccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccC
Confidence             889999999821                          11124445666545999999876543

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=95.13  E-value=0.21  Score=43.42  Aligned_cols=34  Identities=35%  Similarity=0.476  Sum_probs=30.7

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  229 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~  229 (361)
                      ..+|+|+|+|++|...++.+.+.|..+++.+|.+
T Consensus        21 ~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        21 QATVAICGLGGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             CCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            3679999999999999999999999889999887

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=95.12  E-value=0.12  Score=46.24  Aligned_cols=77  Identities=30%  Similarity=0.394  Sum_probs=50.0

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCE-EE--cCCCCCccHHHHHHHHc--CCCc
Q 018072          197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FV--NTSEHDRPIQEVIAEMT--NGGV  266 (361)
Q Consensus       197 ~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~-vv--~~~~~~~~~~~~i~~~~--~~g~  266 (361)
                      .++||+|+ |.+|...+..+...|. +|+++++++++.+.+.+    .+... .+  |..+.+ ++.+.+....  .++.
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~~   79 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKED-EIADMIAAAAAEFGGL   79 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHH-HHHHHHHHHHHhcCCC
Confidence            57999998 9999999988888898 89999998877655543    23221 12  222211 2333333322  1368


Q ss_pred             cEEEEccCC
Q 018072          267 DRSVECTGN  275 (361)
Q Consensus       267 Dvvid~~g~  275 (361)
                      |++|.+.+.
T Consensus        80 d~vi~~a~~   88 (255)
T TIGR01963        80 DILVNNAGI   88 (255)
T ss_pred             CEEEECCCC
Confidence            999998864

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=95.11  E-value=0.13  Score=46.39  Aligned_cols=79  Identities=27%  Similarity=0.331  Sum_probs=49.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHH----HHHcCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE----AKKFGVTD-FVNTSEHD-RPIQEVIAEMTN--GG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~----~~~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g  265 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++ +.+.    ..+.+... .+..+-.+ ..+.+.+.+...  ++
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   91 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHGT-NWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGK   91 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCc-HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999998 9999999998888999 888887773 3222    22334322 22222222 123333333322  36


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|+++++.|.
T Consensus        92 id~li~~ag~  101 (258)
T PRK06935         92 IDILVNNAGT  101 (258)
T ss_pred             CCEEEECCCC
Confidence            8999998874

>PRK07102 short chain dehydrogenase; Provisional

Probab=95.10  E-value=0.19  Score=44.66  Aligned_cols=77  Identities=18%  Similarity=0.201  Sum_probs=48.2

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----c-CCC-EEEcCCCCC-ccHHHHHHHHcCCCccE
Q 018072          197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----F-GVT-DFVNTSEHD-RPIQEVIAEMTNGGVDR  268 (361)
Q Consensus       197 ~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~-G~~-~vv~~~~~~-~~~~~~i~~~~~~g~Dv  268 (361)
                      .+++|+|+ |++|...++.+...|. +|+++++++++.+.+.+    . +.. +++..+-.+ .++.+.+.... ..+|+
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~-~~~d~   79 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLP-ALPDI   79 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHh-hcCCE
Confidence            47899987 9999999998888898 89999999877654322    1 111 122222122 11333333322 25799


Q ss_pred             EEEccCC
Q 018072          269 SVECTGN  275 (361)
Q Consensus       269 vid~~g~  275 (361)
                      ++.++|.
T Consensus        80 vv~~ag~   86 (243)
T PRK07102         80 VLIAVGT   86 (243)
T ss_pred             EEECCcC
Confidence            9988764

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=95.10  E-value=0.081  Score=42.42  Aligned_cols=79  Identities=24%  Similarity=0.333  Sum_probs=49.0

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEc-CChhhHHHHHH-cCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVD-RSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  273 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~-~~~~~~~~~~~-~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~  273 (361)
                      --+|-|+|+|.+|......+...|. .|..+. ++.++.+.+.. ++...+.+..+           .. ...|++|-++
T Consensus        10 ~l~I~iIGaGrVG~~La~aL~~ag~-~v~~v~srs~~sa~~a~~~~~~~~~~~~~~-----------~~-~~aDlv~iav   76 (127)
T PF10727_consen   10 RLKIGIIGAGRVGTALARALARAGH-EVVGVYSRSPASAERAAAFIGAGAILDLEE-----------IL-RDADLVFIAV   76 (127)
T ss_dssp             --EEEEECTSCCCCHHHHHHHHTTS-EEEEESSCHH-HHHHHHC--TT-----TTG-----------GG-CC-SEEEE-S
T ss_pred             ccEEEEECCCHHHHHHHHHHHHCCC-eEEEEEeCCccccccccccccccccccccc-----------cc-ccCCEEEEEe
Confidence            4589999999999999999999998 787774 45555555554 34333332211           11 2589999999


Q ss_pred             CChHHHHHHHHHhcC
Q 018072          274 GNIDNMISAFECVHD  288 (361)
Q Consensus       274 g~~~~~~~~~~~l~~  288 (361)
                      .. +.+....+.|..
T Consensus        77 pD-daI~~va~~La~   90 (127)
T PF10727_consen   77 PD-DAIAEVAEQLAQ   90 (127)
T ss_dssp             -C-CHHHHHHHHHHC
T ss_pred             ch-HHHHHHHHHHHH
Confidence            88 677777777764

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.10  E-value=0.18  Score=46.02  Aligned_cols=82  Identities=22%  Similarity=0.286  Sum_probs=50.5

Q ss_pred             CCCCCEEEEEcC---CHHHHHHHHHHHHcCCCeEEEEcCCh---hhHHHH-HHcCCCEEEcCCCCC-ccHHHHHHHHcC-
Q 018072          193 PERGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSS---KRFEEA-KKFGVTDFVNTSEHD-RPIQEVIAEMTN-  263 (361)
Q Consensus       193 ~~~g~~VlI~G~---g~vG~~a~~~a~~~g~~~Vi~~~~~~---~~~~~~-~~~G~~~vv~~~~~~-~~~~~~i~~~~~-  263 (361)
                      +-.+.++||+|+   +++|.+.++.+...|+ +|+.+.+++   ++++.+ ++++....+..+-.+ .+..+.+..+.. 
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   85 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKK   85 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHh
Confidence            345688999986   5899999998888999 888776653   333333 334532222222222 223333333322 


Q ss_pred             -CCccEEEEccCC
Q 018072          264 -GGVDRSVECTGN  275 (361)
Q Consensus       264 -~g~Dvvid~~g~  275 (361)
                       +.+|++++++|.
T Consensus        86 ~g~iD~lv~nAG~   98 (272)
T PRK08159         86 WGKLDFVVHAIGF   98 (272)
T ss_pred             cCCCcEEEECCcc
Confidence             378999999873

>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase

Probab=95.10  E-value=0.64  Score=42.31  Aligned_cols=102  Identities=20%  Similarity=0.263  Sum_probs=64.0

Q ss_pred             hcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcCC
Q 018072          190 VAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNG  264 (361)
Q Consensus       190 ~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g-~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~~  264 (361)
                      ...+++|++||=+|+|+ |..++.++..++ ...|+++|.++++++.+++    +|.+.+.. ...+  .. .+.. ..+
T Consensus        66 ~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~-~~~D--~~-~~~~-~~~  139 (264)
T TIGR00446        66 ALEPDPPERVLDMAAAP-GGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGVLNVAV-TNFD--GR-VFGA-AVP  139 (264)
T ss_pred             HhCCCCcCEEEEECCCc-hHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEE-ecCC--HH-Hhhh-hcc
Confidence            34678999988888765 555555666553 2489999999999877743    66654222 2222  11 1111 123


Q ss_pred             CccEEEE---ccCC-------------------------hHHHHHHHHHhcCCCcEEEEEcC
Q 018072          265 GVDRSVE---CTGN-------------------------IDNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       265 g~Dvvid---~~g~-------------------------~~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      .||+|+-   |+|.                         .+.+..+++.++++ |+++....
T Consensus       140 ~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpg-G~lvYstc  200 (264)
T TIGR00446       140 KFDAILLDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPG-GVLVYSTC  200 (264)
T ss_pred             CCCEEEEcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEeC
Confidence            5999875   2332                         12567888899997 99876543

>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed

Probab=95.10  E-value=0.35  Score=42.10  Aligned_cols=98  Identities=19%  Similarity=0.201  Sum_probs=65.0

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHH-HcCCCccEE
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAE-MTNGGVDRS  269 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~-~~~~g~Dvv  269 (361)
                      ++.+||-+|+|. |..+..+++.....+|+++|.+++..+.+++    .+...+ .....+  ..+.+.. +.++.+|.|
T Consensus        40 ~~~~VLDiGcGt-G~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v-~~~~~d--~~~~l~~~~~~~~~D~V  115 (202)
T PRK00121         40 DAPIHLEIGFGK-GEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNL-RLLCGD--AVEVLLDMFPDGSLDRI  115 (202)
T ss_pred             CCCeEEEEccCC-CHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCE-EEEecC--HHHHHHHHcCccccceE
Confidence            678899999876 7777777777644489999999998888754    343322 112222  3123322 223478988


Q ss_pred             EEccC--------------ChHHHHHHHHHhcCCCcEEEEEc
Q 018072          270 VECTG--------------NIDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       270 id~~g--------------~~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      +-...              .+..+..+.+.|+++ |.+++..
T Consensus       116 ~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~Lkpg-G~l~i~~  156 (202)
T PRK00121        116 YLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPG-GEIHFAT  156 (202)
T ss_pred             EEECCCCCCCccccccccCCHHHHHHHHHHcCCC-CEEEEEc
Confidence            86432              235688889999997 9998764

>PRK07574 formate dehydrogenase; Provisional

Probab=95.09  E-value=0.13  Score=49.49  Aligned_cols=45  Identities=24%  Similarity=0.381  Sum_probs=36.1

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcC
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG  240 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G  240 (361)
                      .|.+|.|+|.|.+|...++.++..|. +|++++++....+..+.+|
T Consensus       191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g  235 (385)
T PRK07574        191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELG  235 (385)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcC
Confidence            56799999999999999999999999 9999998764333333344

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=95.06  E-value=0.13  Score=44.05  Aligned_cols=39  Identities=36%  Similarity=0.422  Sum_probs=32.3

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK  237 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~  237 (361)
                      +|.|+|+|.+|...++++...|. +|+.++.+++.++.+.
T Consensus         1 ~V~ViGaG~mG~~iA~~~a~~G~-~V~l~d~~~~~l~~~~   39 (180)
T PF02737_consen    1 KVAVIGAGTMGRGIAALFARAGY-EVTLYDRSPEALERAR   39 (180)
T ss_dssp             EEEEES-SHHHHHHHHHHHHTTS-EEEEE-SSHHHHHHHH
T ss_pred             CEEEEcCCHHHHHHHHHHHhCCC-cEEEEECChHHHHhhh
Confidence            58899999999998888888898 9999999998776653

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.03  E-value=0.5  Score=42.06  Aligned_cols=102  Identities=18%  Similarity=0.172  Sum_probs=59.3

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcC-ChhhH----HHHHHcCCCE-EE--cCCCCCccHHHHHHHHcC--C
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRF----EEAKKFGVTD-FV--NTSEHDRPIQEVIAEMTN--G  264 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~-~~~~~----~~~~~~G~~~-vv--~~~~~~~~~~~~i~~~~~--~  264 (361)
                      +.++||+|+ |++|...++-+...|+ +|+.+.+ +.++.    +.+++.+... .+  |..+.+ .+...+.....  +
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~   83 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTRE-GCETLAKATIDRYG   83 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHH-HHHHHHHHHHHHcC
Confidence            578999988 8999998888878898 6655543 32322    2233344332 22  222211 13223333221  3


Q ss_pred             CccEEEEccCC----------hH---------------HHHHHHHHhcCCCcEEEEEcCCC
Q 018072          265 GVDRSVECTGN----------ID---------------NMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       265 g~Dvvid~~g~----------~~---------------~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      ++|++|.++|.          .+               ..+.+.+.++.. |+++.++...
T Consensus        84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~iv~~sS~~  143 (252)
T PRK06077         84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREG-GAIVNIASVA  143 (252)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcC-cEEEEEcchh
Confidence            78999999973          11               123445566676 8999987654

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=95.02  E-value=0.17  Score=52.03  Aligned_cols=81  Identities=14%  Similarity=0.275  Sum_probs=60.7

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  275 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~  275 (361)
                      .++|+|.|.|.+|+..++.++..|. .++++|.++++.+.+++.|...++ -+..+   .+.+++..-+.+|.++-++++
T Consensus       400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~-GDat~---~~~L~~agi~~A~~vvv~~~d  474 (621)
T PRK03562        400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFY-GDATR---MDLLESAGAAKAEVLINAIDD  474 (621)
T ss_pred             cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEE-EeCCC---HHHHHhcCCCcCCEEEEEeCC
Confidence            3689999999999999999999998 899999999999999998875433 22222   223333322378999999988


Q ss_pred             hHHHHH
Q 018072          276 IDNMIS  281 (361)
Q Consensus       276 ~~~~~~  281 (361)
                      ++.-..
T Consensus       475 ~~~n~~  480 (621)
T PRK03562        475 PQTSLQ  480 (621)
T ss_pred             HHHHHH
Confidence            654333

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=95.01  E-value=0.16  Score=45.18  Aligned_cols=80  Identities=23%  Similarity=0.239  Sum_probs=49.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMTN--GG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g  265 (361)
                      .+.++||+|+ |.+|...+..+...|. +|++++++.++...+    +..+... ++..+-.+ ..+.+.+.....  +.
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR   83 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            4578999997 9999999988888898 899999986554332    2233322 22222222 123333332221  26


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++|++.+.
T Consensus        84 ~d~vi~~ag~   93 (251)
T PRK12826         84 LDILVANAGI   93 (251)
T ss_pred             CCEEEECCCC
Confidence            8999999864

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.01  E-value=0.19  Score=45.63  Aligned_cols=78  Identities=23%  Similarity=0.344  Sum_probs=47.8

Q ss_pred             CCCEEEEEcCC---HHHHHHHHHHHHcCCCeEEEEcCChh---hHHHHHH-cCCCEEE--cCCCCCccHHHHHHHHcC--
Q 018072          195 RGSSVAVFGLG---AVGLAAAEGARIAGASRIIGVDRSSK---RFEEAKK-FGVTDFV--NTSEHDRPIQEVIAEMTN--  263 (361)
Q Consensus       195 ~g~~VlI~G~g---~vG~~a~~~a~~~g~~~Vi~~~~~~~---~~~~~~~-~G~~~vv--~~~~~~~~~~~~i~~~~~--  263 (361)
                      .|.++||+|++   ++|.+.++.+...|+ +|+.+++++.   ..+.+.. .+....+  |..+. .++.+.+.....  
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~~~   82 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAED-ASIDAMFAELGKVW   82 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCCH-HHHHHHHHHHHhhc
Confidence            46789999873   899998888888898 7888877632   2222222 2322222  32222 224444444332  


Q ss_pred             CCccEEEEccC
Q 018072          264 GGVDRSVECTG  274 (361)
Q Consensus       264 ~g~Dvvid~~g  274 (361)
                      +.+|++|+++|
T Consensus        83 g~iD~linnAg   93 (262)
T PRK07984         83 PKFDGFVHSIG   93 (262)
T ss_pred             CCCCEEEECCc
Confidence            36899999997

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=95.00  E-value=0.14  Score=45.93  Aligned_cols=80  Identities=18%  Similarity=0.213  Sum_probs=51.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHD-RPIQEVIAEMTN--GG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g  265 (361)
                      .+.+++|+|+ +++|...+..+...|+ +|+.+++++++.+.+.    +.+.+. .+..+-.+ ..+.+.+.....  ++
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   88 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGK   88 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            3789999988 9999999998888898 7888888877655432    234322 22222222 123333333322  36


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++++++|.
T Consensus        89 ~d~li~~ag~   98 (255)
T PRK06113         89 VDILVNNAGG   98 (255)
T ss_pred             CCEEEECCCC
Confidence            8999999873

>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional

Probab=94.98  E-value=0.15  Score=46.43  Aligned_cols=106  Identities=17%  Similarity=0.169  Sum_probs=68.2

Q ss_pred             hhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC-EEEcCCCCCccHHHHHHHHcCCC
Q 018072          187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNGG  265 (361)
Q Consensus       187 ~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~-~vv~~~~~~~~~~~~i~~~~~~g  265 (361)
                      +....+++++.+||=+|+|. |..+..+++..+. +|++++.+++..+.+++.... ..+.....+  +.+  ..+.++.
T Consensus        44 ~l~~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i~~~~~D--~~~--~~~~~~~  117 (263)
T PTZ00098         44 ILSDIELNENSKVLDIGSGL-GGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKIEFEAND--ILK--KDFPENT  117 (263)
T ss_pred             HHHhCCCCCCCEEEEEcCCC-ChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCceEEEECC--ccc--CCCCCCC
Confidence            35667889999999999864 5556667776677 999999999988888763221 111111111  100  0112236


Q ss_pred             ccEEEEcc-----C---ChHHHHHHHHHhcCCCcEEEEEcCC
Q 018072          266 VDRSVECT-----G---NIDNMISAFECVHDGWGVAVLVGVP  299 (361)
Q Consensus       266 ~Dvvid~~-----g---~~~~~~~~~~~l~~~~G~iv~~g~~  299 (361)
                      ||+|+..-     .   ....+..+.+.|+++ |++++....
T Consensus       118 FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPG-G~lvi~d~~  158 (263)
T PTZ00098        118 FDMIYSRDAILHLSYADKKKLFEKCYKWLKPN-GILLITDYC  158 (263)
T ss_pred             eEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCC-cEEEEEEec
Confidence            99998621     1   123577888999998 999887543

>PRK07791 short chain dehydrogenase; Provisional

Probab=94.94  E-value=0.18  Score=46.36  Aligned_cols=80  Identities=24%  Similarity=0.285  Sum_probs=49.5

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCh---------hhHHHH----HHcCCCE-EE--cCCCCCccHHH
Q 018072          194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS---------KRFEEA----KKFGVTD-FV--NTSEHDRPIQE  256 (361)
Q Consensus       194 ~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~---------~~~~~~----~~~G~~~-vv--~~~~~~~~~~~  256 (361)
                      -.+.++||+|+ +++|...++.+...|+ +|+.++++.         ++++.+    ++.+... .+  |..+.+ ++.+
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~-~v~~   81 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWD-GAAN   81 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHH-HHHH
Confidence            35789999988 8999999998888898 788876654         333322    2234332 22  222221 2333


Q ss_pred             HHHHHcC--CCccEEEEccCC
Q 018072          257 VIAEMTN--GGVDRSVECTGN  275 (361)
Q Consensus       257 ~i~~~~~--~g~Dvvid~~g~  275 (361)
                      .+.....  +.+|++|+++|.
T Consensus        82 ~~~~~~~~~g~id~lv~nAG~  102 (286)
T PRK07791         82 LVDAAVETFGGLDVLVNNAGI  102 (286)
T ss_pred             HHHHHHHhcCCCCEEEECCCC
Confidence            3333322  378999999874

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.93  E-value=0.23  Score=45.71  Aligned_cols=78  Identities=21%  Similarity=0.243  Sum_probs=56.9

Q ss_pred             CCCCCEEEEEcCCH-HHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEE
Q 018072          193 PERGSSVAVFGLGA-VGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  271 (361)
Q Consensus       193 ~~~g~~VlI~G~g~-vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid  271 (361)
                      --.|.+|+|+|.|+ +|...+.++...|+ +|+.+.+....                     +.+.+     ..+|+++.
T Consensus       156 ~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t~~---------------------L~~~~-----~~aDIvI~  208 (283)
T PRK14192        156 ELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRTQN---------------------LPELV-----KQADIIVG  208 (283)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCchh---------------------HHHHh-----ccCCEEEE
Confidence            35788999999976 99999999999999 88888652211                     11111     25899999


Q ss_pred             ccCChHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072          272 CTGNIDNMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       272 ~~g~~~~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      ++|.+..+..  +.++++ ..++.+|...
T Consensus       209 AtG~~~~v~~--~~lk~g-avViDvg~n~  234 (283)
T PRK14192        209 AVGKPELIKK--DWIKQG-AVVVDAGFHP  234 (283)
T ss_pred             ccCCCCcCCH--HHcCCC-CEEEEEEEee
Confidence            9998765443  568886 7888888544

>PRK14903 16S rRNA methyltransferase B; Provisional

Probab=94.88  E-value=0.43  Score=46.76  Aligned_cols=105  Identities=18%  Similarity=0.253  Sum_probs=66.5

Q ss_pred             hhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcC
Q 018072          189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN  263 (361)
Q Consensus       189 ~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g-~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~  263 (361)
                      ...++++|++||=+|+|+ |..+++++..++ ...|+++|.++++++.+++    +|.+.+. ....+  .. .+.....
T Consensus       231 ~~l~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~-~~~~D--a~-~l~~~~~  305 (431)
T PRK14903        231 LLMELEPGLRVLDTCAAP-GGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIE-IKIAD--AE-RLTEYVQ  305 (431)
T ss_pred             HHhCCCCCCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeEE-EEECc--hh-hhhhhhh
Confidence            345778999988888765 555666666662 3489999999999888754    6765421 11111  11 1111223


Q ss_pred             CCccEEEE---ccCC-------------------------hHHHHHHHHHhcCCCcEEEEEcCC
Q 018072          264 GGVDRSVE---CTGN-------------------------IDNMISAFECVHDGWGVAVLVGVP  299 (361)
Q Consensus       264 ~g~Dvvid---~~g~-------------------------~~~~~~~~~~l~~~~G~iv~~g~~  299 (361)
                      +.||.|+-   |+|.                         .+.+..+++.|+++ |+++....+
T Consensus       306 ~~fD~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG-G~LvYsTCs  368 (431)
T PRK14903        306 DTFDRILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKG-GILLYSTCT  368 (431)
T ss_pred             ccCCEEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEECC
Confidence            46999985   3322                         12366888999997 998766543

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=94.87  E-value=0.23  Score=39.64  Aligned_cols=94  Identities=22%  Similarity=0.379  Sum_probs=53.2

Q ss_pred             EEEEEcC-CHHHHHHHHHHHH-cCCCeEEEEcCChh-hH--HHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEc
Q 018072          198 SVAVFGL-GAVGLAAAEGARI-AGASRIIGVDRSSK-RF--EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  272 (361)
Q Consensus       198 ~VlI~G~-g~vG~~a~~~a~~-~g~~~Vi~~~~~~~-~~--~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~  272 (361)
                      +|+|+|+ |.+|...++.+.. .+.+-+-+++++++ ..  +.-.-.|... ....     ....+..+.. .+|++||+
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~-~~~~-----v~~~l~~~~~-~~DVvIDf   74 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGP-LGVP-----VTDDLEELLE-EADVVIDF   74 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST--SSB-----EBS-HHHHTT-H-SEEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCC-cccc-----cchhHHHhcc-cCCEEEEc
Confidence            6899999 9999999999988 56644566666651 11  1111112110 0000     1112223332 38999999


Q ss_pred             cCChHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072          273 TGNIDNMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       273 ~g~~~~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      + .++.....++.+... |.-+.+|.+.
T Consensus        75 T-~p~~~~~~~~~~~~~-g~~~ViGTTG  100 (124)
T PF01113_consen   75 T-NPDAVYDNLEYALKH-GVPLVIGTTG  100 (124)
T ss_dssp             S--HHHHHHHHHHHHHH-T-EEEEE-SS
T ss_pred             C-ChHHhHHHHHHHHhC-CCCEEEECCC
Confidence            9 556766666666666 7878888766

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=94.87  E-value=0.14  Score=53.14  Aligned_cols=79  Identities=23%  Similarity=0.347  Sum_probs=52.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-----cCCCE--E--EcCCCCCccHHHHHHHHcC-
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVTD--F--VNTSEHDRPIQEVIAEMTN-  263 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-----~G~~~--v--v~~~~~~~~~~~~i~~~~~-  263 (361)
                      .+.++||+|+ |++|...++.+...|+ +|++++++.++.+.+.+     .+...  .  .|..+. ..+.+.+.+... 
T Consensus       413 ~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~-~~v~~a~~~i~~~  490 (676)
T TIGR02632       413 ARRVAFVTGGAGGIGRETARRLAAEGA-HVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDE-QAVKAAFADVALA  490 (676)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCH-HHHHHHHHHHHHh
Confidence            4789999988 9999999998888898 89999998877655432     23221  1  222221 123333333322 


Q ss_pred             -CCccEEEEccCC
Q 018072          264 -GGVDRSVECTGN  275 (361)
Q Consensus       264 -~g~Dvvid~~g~  275 (361)
                       +++|++|+++|.
T Consensus       491 ~g~iDilV~nAG~  503 (676)
T TIGR02632       491 YGGVDIVVNNAGI  503 (676)
T ss_pred             cCCCcEEEECCCC
Confidence             379999999984

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=94.86  E-value=0.2  Score=44.64  Aligned_cols=83  Identities=18%  Similarity=0.257  Sum_probs=52.8

Q ss_pred             CCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCE--E--EcCCCCC-ccHHHHHHHH
Q 018072          192 KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD--F--VNTSEHD-RPIQEVIAEM  261 (361)
Q Consensus       192 ~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~--v--v~~~~~~-~~~~~~i~~~  261 (361)
                      +..++.+++|+|+ |++|...++.+...|+ +|++++++.++.+.+    ++.+...  +  .+....+ .++.+.+..+
T Consensus         8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~   86 (247)
T PRK08945          8 DLLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTI   86 (247)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHH
Confidence            3557889999988 9999999988888898 899999987665433    3333321  2  2222111 1233333333


Q ss_pred             cC--CCccEEEEccCC
Q 018072          262 TN--GGVDRSVECTGN  275 (361)
Q Consensus       262 ~~--~g~Dvvid~~g~  275 (361)
                      .+  +.+|.+|.+++.
T Consensus        87 ~~~~~~id~vi~~Ag~  102 (247)
T PRK08945         87 EEQFGRLDGVLHNAGL  102 (247)
T ss_pred             HHHhCCCCEEEECCcc
Confidence            22  268999998864

>PRK08303 short chain dehydrogenase; Provisional

Probab=94.84  E-value=0.18  Score=46.99  Aligned_cols=78  Identities=24%  Similarity=0.302  Sum_probs=49.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCh----------hhHHH----HHHcCCCE-EE--cCCCCCccHHH
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS----------KRFEE----AKKFGVTD-FV--NTSEHDRPIQE  256 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~----------~~~~~----~~~~G~~~-vv--~~~~~~~~~~~  256 (361)
                      .|.+++|+|+ +++|.+.++.+...|+ +|+.++++.          ++++.    +++.|... .+  |..+. .++.+
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~-~~v~~   84 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVP-EQVRA   84 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCH-HHHHH
Confidence            4679999988 8999999998888998 888888763          23322    23344332 22  22222 12333


Q ss_pred             HHHHHcC--CCccEEEEcc-C
Q 018072          257 VIAEMTN--GGVDRSVECT-G  274 (361)
Q Consensus       257 ~i~~~~~--~g~Dvvid~~-g  274 (361)
                      .+.....  +.+|++|+++ |
T Consensus        85 ~~~~~~~~~g~iDilVnnA~g  105 (305)
T PRK08303         85 LVERIDREQGRLDILVNDIWG  105 (305)
T ss_pred             HHHHHHHHcCCccEEEECCcc
Confidence            3333322  3689999998 5

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.83  E-value=0.25  Score=49.12  Aligned_cols=70  Identities=29%  Similarity=0.291  Sum_probs=49.7

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChh-----hHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccE
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK-----RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDR  268 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~-----~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dv  268 (361)
                      ..+.+|+|+|+|++|+.++.+++..|. .|++++.++.     ..+.+++.|..........           ....+|+
T Consensus        14 ~~~~~v~viG~G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~-----------~~~~~D~   81 (480)
T PRK01438         14 WQGLRVVVAGLGVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGPGPT-----------LPEDTDL   81 (480)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc-----------ccCCCCE
Confidence            356799999999999999999999998 8999986542     2344666787654432111           0125788


Q ss_pred             EEEccCC
Q 018072          269 SVECTGN  275 (361)
Q Consensus       269 vid~~g~  275 (361)
                      |+.++|-
T Consensus        82 Vv~s~Gi   88 (480)
T PRK01438         82 VVTSPGW   88 (480)
T ss_pred             EEECCCc
Confidence            9888875

>PRK03612 spermidine synthase; Provisional

Probab=94.82  E-value=0.2  Score=50.37  Aligned_cols=99  Identities=18%  Similarity=0.113  Sum_probs=64.0

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcC-CC---------EEEcCCCCCccHHHHHHHHcC
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG-VT---------DFVNTSEHDRPIQEVIAEMTN  263 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G-~~---------~vv~~~~~~~~~~~~i~~~~~  263 (361)
                      ++.++||++|+|. |..+..+++.....+|+++|.+++-.+.+++.. ..         .-++....|  ..+.++. .+
T Consensus       296 ~~~~rVL~IG~G~-G~~~~~ll~~~~v~~v~~VEid~~vi~~ar~~~~l~~~~~~~~~dprv~vi~~D--a~~~l~~-~~  371 (521)
T PRK03612        296 ARPRRVLVLGGGD-GLALREVLKYPDVEQVTLVDLDPAMTELARTSPALRALNGGALDDPRVTVVNDD--AFNWLRK-LA  371 (521)
T ss_pred             CCCCeEEEEcCCc-cHHHHHHHhCCCcCeEEEEECCHHHHHHHHhCCcchhhhccccCCCceEEEECh--HHHHHHh-CC
Confidence            4568999998863 566666776544369999999999999988721 10         011111112  3333333 23


Q ss_pred             CCccEEEEccCCh-----------HHHHHHHHHhcCCCcEEEEEc
Q 018072          264 GGVDRSVECTGNI-----------DNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       264 ~g~Dvvid~~g~~-----------~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      +.||+|+-....+           +.++.+.+.|+++ |.++.-.
T Consensus       372 ~~fDvIi~D~~~~~~~~~~~L~t~ef~~~~~~~L~pg-G~lv~~~  415 (521)
T PRK03612        372 EKFDVIIVDLPDPSNPALGKLYSVEFYRLLKRRLAPD-GLLVVQS  415 (521)
T ss_pred             CCCCEEEEeCCCCCCcchhccchHHHHHHHHHhcCCC-eEEEEec
Confidence            4899998765432           2467888999998 9988754

>PRK06523 short chain dehydrogenase; Provisional

Probab=94.82  E-value=0.11  Score=46.71  Aligned_cols=73  Identities=27%  Similarity=0.345  Sum_probs=47.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC-EEE--cCCCCCccHHHHHHHHcC--CCccE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFV--NTSEHDRPIQEVIAEMTN--GGVDR  268 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~-~vv--~~~~~~~~~~~~i~~~~~--~g~Dv  268 (361)
                      +|.++||+|+ |++|...++.+...|+ +|+++++++++.     .+.. ..+  |..+.+ .+.+.+.....  +++|+
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~-----~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~~id~   80 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDD-----LPEGVEFVAADLTTAE-GCAAVARAVLERLGGVDI   80 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhh-----cCCceeEEecCCCCHH-HHHHHHHHHHHHcCCCCE
Confidence            4789999998 9999999998888898 899998876532     1111 112  222221 13333322222  36899


Q ss_pred             EEEccC
Q 018072          269 SVECTG  274 (361)
Q Consensus       269 vid~~g  274 (361)
                      +|+++|
T Consensus        81 vi~~ag   86 (260)
T PRK06523         81 LVHVLG   86 (260)
T ss_pred             EEECCc
Confidence            999987

>PLN02589 caffeoyl-CoA O-methyltransferase

Probab=94.82  E-value=0.31  Score=43.84  Aligned_cols=101  Identities=18%  Similarity=0.173  Sum_probs=68.2

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHc---
Q 018072          191 AKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT---  262 (361)
Q Consensus       191 ~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~---  262 (361)
                      .+.....+||=+|.+ +|+.++.+|+.++. .+|+.++.++++.+.+++    .|...-+.....+  ..+.+..+.   
T Consensus        75 ~~~~~ak~iLEiGT~-~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~G~--a~e~L~~l~~~~  151 (247)
T PLN02589         75 LKLINAKNTMEIGVY-TGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGP--ALPVLDQMIEDG  151 (247)
T ss_pred             HHHhCCCEEEEEeCh-hhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEecc--HHHHHHHHHhcc
Confidence            444556789999873 47777778877632 389999999998877744    5755444443333  455555543   


Q ss_pred             --CCCccEEEEccCChH---HHHHHHHHhcCCCcEEEE
Q 018072          263 --NGGVDRSVECTGNID---NMISAFECVHDGWGVAVL  295 (361)
Q Consensus       263 --~~g~Dvvid~~g~~~---~~~~~~~~l~~~~G~iv~  295 (361)
                        .+.||.||--.....   .++.++++|+++ |.++.
T Consensus       152 ~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~G-Gviv~  188 (247)
T PLN02589        152 KYHGTFDFIFVDADKDNYINYHKRLIDLVKVG-GVIGY  188 (247)
T ss_pred             ccCCcccEEEecCCHHHhHHHHHHHHHhcCCC-eEEEE
Confidence              247999998765433   567888999996 87654

>PLN00203 glutamyl-tRNA reductase

Probab=94.80  E-value=0.1  Score=52.07  Aligned_cols=98  Identities=19%  Similarity=0.276  Sum_probs=61.7

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      +.+|+|+|+|.+|.+++..+...|..+|+++.++.++.+.+.+ ++...+ ....    +.+ +.... ..+|+||.+++
T Consensus       266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i-~~~~----~~d-l~~al-~~aDVVIsAT~  338 (519)
T PLN00203        266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEI-IYKP----LDE-MLACA-AEADVVFTSTS  338 (519)
T ss_pred             CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCce-Eeec----Hhh-HHHHH-hcCCEEEEccC
Confidence            6899999999999999999999998789999999888766654 532111 1111    111 11111 25899999987


Q ss_pred             ChHH--HHHHHHHhcC----CCc--EEEEEcCCC
Q 018072          275 NIDN--MISAFECVHD----GWG--VAVLVGVPS  300 (361)
Q Consensus       275 ~~~~--~~~~~~~l~~----~~G--~iv~~g~~~  300 (361)
                      .+..  ....++.+.+    .+.  .++.++.+.
T Consensus       339 s~~pvI~~e~l~~~~~~~~~~~~~~~~IDLAvPR  372 (519)
T PLN00203        339 SETPLFLKEHVEALPPASDTVGGKRLFVDISVPR  372 (519)
T ss_pred             CCCCeeCHHHHHHhhhcccccCCCeEEEEeCCCC
Confidence            6553  2334444321    101  366666654

>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]

Probab=94.78  E-value=0.73  Score=40.40  Aligned_cols=119  Identities=16%  Similarity=0.110  Sum_probs=73.6

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  273 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~-~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~  273 (361)
                      .|.+|||+|+|.+|.-=+.+....|+ +|+++..+. +.+..+.+-+--..+.   ..  +...  .+  .++++||-++
T Consensus        11 ~~k~VlvvGgG~va~rKa~~ll~~ga-~v~Vvs~~~~~el~~~~~~~~i~~~~---~~--~~~~--~~--~~~~lviaAt   80 (210)
T COG1648          11 EGKKVLVVGGGSVALRKARLLLKAGA-DVTVVSPEFEPELKALIEEGKIKWIE---RE--FDAE--DL--DDAFLVIAAT   80 (210)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhcCC-EEEEEcCCccHHHHHHHHhcCcchhh---cc--cChh--hh--cCceEEEEeC
Confidence            46789999999999999999999999 777775544 3333333322211111   11  1100  11  1489999999


Q ss_pred             CChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeec
Q 018072          274 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFG  324 (361)
Q Consensus       274 g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~  324 (361)
                      ++++.-+...+..... +.++.+-..+...++.++...-...+.+-=+..|
T Consensus        81 ~d~~ln~~i~~~a~~~-~i~vNv~D~p~~~~f~~Pa~~~r~~l~iaIsT~G  130 (210)
T COG1648          81 DDEELNERIAKAARER-RILVNVVDDPELCDFIFPAIVDRGPLQIAISTGG  130 (210)
T ss_pred             CCHHHHHHHHHHHHHh-CCceeccCCcccCceecceeeccCCeEEEEECCC
Confidence            9976666777777776 8888776544334555544333366666545444

>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase

Probab=94.75  E-value=0.28  Score=43.45  Aligned_cols=104  Identities=16%  Similarity=0.232  Sum_probs=65.3

Q ss_pred             hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHc
Q 018072          188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT  262 (361)
Q Consensus       188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~  262 (361)
                      .....++++++||=+|+|. |..+..+++..+. .+|+++|.+++..+.+++    .+.+.+. ....+  ..+ + .+.
T Consensus        38 l~~l~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~-~~~~d--~~~-~-~~~  111 (231)
T TIGR02752        38 MKRMNVQAGTSALDVCCGT-ADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVE-LVHGN--AME-L-PFD  111 (231)
T ss_pred             HHhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceE-EEEec--hhc-C-CCC
Confidence            3456778999999999865 6677777777642 389999999988777654    2332211 11111  100 0 112


Q ss_pred             CCCccEEEEccC------ChHHHHHHHHHhcCCCcEEEEEcC
Q 018072          263 NGGVDRSVECTG------NIDNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       263 ~~g~Dvvid~~g------~~~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      ++.+|+|+-...      ....+..+.+.|+++ |+++..-.
T Consensus       112 ~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~g-G~l~~~~~  152 (231)
T TIGR02752       112 DNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPG-GKVVCLET  152 (231)
T ss_pred             CCCccEEEEecccccCCCHHHHHHHHHHHcCcC-eEEEEEEC
Confidence            347899985321      123567788999997 99987643

MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=94.74  E-value=0.21  Score=44.94  Aligned_cols=101  Identities=16%  Similarity=0.135  Sum_probs=60.2

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc--CCCEE-EcCCCCCccHHHHHHHHcCCCccEE
Q 018072          194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF--GVTDF-VNTSEHDRPIQEVIAEMTNGGVDRS  269 (361)
Q Consensus       194 ~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~--G~~~v-v~~~~~~~~~~~~i~~~~~~g~Dvv  269 (361)
                      ..+.+|||+|+ |.+|...+..+...|. +|+++.+++++.+.....  ++..+ .|..+.   . +.+......++|+|
T Consensus        15 ~~~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~---~-~~l~~~~~~~~d~v   89 (251)
T PLN00141         15 VKTKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADVTEG---S-DKLVEAIGDDSDAV   89 (251)
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeCCCC---H-HHHHHHhhcCCCEE
Confidence            34579999998 9999999988888888 898888887765443221  22221 232221   1 12222221268999


Q ss_pred             EEccCChH-------------HHHHHHHHhcCC-CcEEEEEcCC
Q 018072          270 VECTGNID-------------NMISAFECVHDG-WGVAVLVGVP  299 (361)
Q Consensus       270 id~~g~~~-------------~~~~~~~~l~~~-~G~iv~~g~~  299 (361)
                      |.+.|...             .....++.+... .++++.++..
T Consensus        90 i~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~  133 (251)
T PLN00141         90 ICATGFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI  133 (251)
T ss_pred             EECCCCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence            99876421             123344444432 1578887754

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=94.73  E-value=0.2  Score=45.26  Aligned_cols=80  Identities=21%  Similarity=0.302  Sum_probs=50.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHD-RPIQEVIAEMTN--GG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g  265 (361)
                      .+.+++|+|+ +++|...+..+...|+ +|+.+++++++++.+.    +.|... .+..+-.+ ..+.+.+.+...  +.
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   87 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGV   87 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            4678999988 8999998887878898 7888888887665432    334432 22222222 112333332222  36


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++|++.|.
T Consensus        88 id~li~~ag~   97 (265)
T PRK07097         88 IDILVNNAGI   97 (265)
T ss_pred             CCEEEECCCC
Confidence            8999999874

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=94.73  E-value=0.22  Score=47.70  Aligned_cols=34  Identities=29%  Similarity=0.433  Sum_probs=30.9

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  229 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~  229 (361)
                      ..+|+|+|+|++|..+++.+.+.|..+++.+|.+
T Consensus        41 ~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         41 NARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            4689999999999999999999999899999776

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=94.70  E-value=0.24  Score=50.71  Aligned_cols=93  Identities=12%  Similarity=0.144  Sum_probs=66.3

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 018072          197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  276 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~  276 (361)
                      ++|+|.|.|.+|+..++.++..|. .++++|.|+++.+.+++.|...++- +..+   .+.+++..-+.+|.++-+++++
T Consensus       401 ~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~G-Dat~---~~~L~~agi~~A~~vv~~~~d~  475 (601)
T PRK03659        401 PQVIIVGFGRFGQVIGRLLMANKM-RITVLERDISAVNLMRKYGYKVYYG-DATQ---LELLRAAGAEKAEAIVITCNEP  475 (601)
T ss_pred             CCEEEecCchHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhCCCeEEEe-eCCC---HHHHHhcCCccCCEEEEEeCCH
Confidence            689999999999999999999998 8999999999999999988754432 2222   2233333223789999999886


Q ss_pred             HHHHHH---HHHhcCCCcEEEE
Q 018072          277 DNMISA---FECVHDGWGVAVL  295 (361)
Q Consensus       277 ~~~~~~---~~~l~~~~G~iv~  295 (361)
                      +.-...   .+.+.++ -+++.
T Consensus       476 ~~n~~i~~~~r~~~p~-~~Iia  496 (601)
T PRK03659        476 EDTMKIVELCQQHFPH-LHILA  496 (601)
T ss_pred             HHHHHHHHHHHHHCCC-CeEEE
Confidence            543333   3444454 45543

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=94.69  E-value=0.22  Score=45.71  Aligned_cols=76  Identities=17%  Similarity=0.158  Sum_probs=46.1

Q ss_pred             EEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-c----CC---CEEEcCCCCCccHHHHHHHHcCC-CccE
Q 018072          199 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F----GV---TDFVNTSEHDRPIQEVIAEMTNG-GVDR  268 (361)
Q Consensus       199 VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~----G~---~~vv~~~~~~~~~~~~i~~~~~~-g~Dv  268 (361)
                      |||+|+ |.+|...+.-+...+.++++.+++++.++..++. +    ..   ...+...-.|-.-.+.+...... ++|+
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi   80 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI   80 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence            789987 9999988887777787799999999998777653 4    11   11111111221134566666655 8999


Q ss_pred             EEEccC
Q 018072          269 SVECTG  274 (361)
Q Consensus       269 vid~~g  274 (361)
                      ||+++.
T Consensus        81 VfHaAA   86 (293)
T PF02719_consen   81 VFHAAA   86 (293)
T ss_dssp             EEE---
T ss_pred             EEEChh
Confidence            999875

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases

Probab=94.69  E-value=0.055  Score=47.30  Aligned_cols=103  Identities=24%  Similarity=0.268  Sum_probs=67.9

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcC---
Q 018072          192 KPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN---  263 (361)
Q Consensus       192 ~~~~g~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~---  263 (361)
                      +.....+||-+|.+. |+.++.+|+.+.. .+|+.++.++++.+.+++    .|...-+.....+  ..+.+..+..   
T Consensus        42 ~~~~~k~vLEIGt~~-GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~gd--a~~~l~~l~~~~~  118 (205)
T PF01596_consen   42 RLTRPKRVLEIGTFT-GYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIEGD--ALEVLPELANDGE  118 (205)
T ss_dssp             HHHT-SEEEEESTTT-SHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES---HHHHHHHHHHTTT
T ss_pred             HhcCCceEEEecccc-ccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEec--cHhhHHHHHhccC
Confidence            344557899999754 7778888887642 399999999998888754    5664333333333  4445554432   


Q ss_pred             -CCccEEEEccCChH---HHHHHHHHhcCCCcEEEEEcC
Q 018072          264 -GGVDRSVECTGNID---NMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       264 -~g~Dvvid~~g~~~---~~~~~~~~l~~~~G~iv~~g~  298 (361)
                       +.||.||--.....   .++.++++|+++ |.++.=..
T Consensus       119 ~~~fD~VFiDa~K~~y~~y~~~~~~ll~~g-gvii~DN~  156 (205)
T PF01596_consen  119 EGQFDFVFIDADKRNYLEYFEKALPLLRPG-GVIIADNV  156 (205)
T ss_dssp             TTSEEEEEEESTGGGHHHHHHHHHHHEEEE-EEEEEETT
T ss_pred             CCceeEEEEcccccchhhHHHHHhhhccCC-eEEEEccc
Confidence             36999987665433   467888999996 87766543

The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=94.68  E-value=0.25  Score=47.73  Aligned_cols=81  Identities=21%  Similarity=0.346  Sum_probs=50.1

Q ss_pred             CCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHH-------HHHHc-CCCEE-EcCCCCCccHHHHHHHH
Q 018072          192 KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE-------EAKKF-GVTDF-VNTSEHDRPIQEVIAEM  261 (361)
Q Consensus       192 ~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~-------~~~~~-G~~~v-v~~~~~~~~~~~~i~~~  261 (361)
                      ....+.+|||+|+ |.+|...+..+...|. +|+++.++..+.+       ..... ++..+ .|..+.+ .+.+.++..
T Consensus        56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~-~l~~~~~~~  133 (390)
T PLN02657         56 KEPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDAD-SLRKVLFSE  133 (390)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHH-HHHHHHHHh
Confidence            3456789999998 9999999998888898 8999988765432       11112 23222 2222221 133233221


Q ss_pred             cCCCccEEEEccCC
Q 018072          262 TNGGVDRSVECTGN  275 (361)
Q Consensus       262 ~~~g~Dvvid~~g~  275 (361)
                       ..++|+||+|++.
T Consensus       134 -~~~~D~Vi~~aa~  146 (390)
T PLN02657        134 -GDPVDVVVSCLAS  146 (390)
T ss_pred             -CCCCcEEEECCcc
Confidence             1169999998864

>PLN03139 formate dehydrogenase; Provisional

Probab=94.67  E-value=0.16  Score=48.74  Aligned_cols=46  Identities=22%  Similarity=0.274  Sum_probs=36.9

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCC
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV  241 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~  241 (361)
                      .|.+|.|+|.|.+|...++.++..|. +|++++++....+..++.|+
T Consensus       198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g~  243 (386)
T PLN03139        198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETGA  243 (386)
T ss_pred             CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcCc
Confidence            57899999999999999999999999 89999887544444444443

>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]

Probab=94.67  E-value=0.28  Score=45.02  Aligned_cols=97  Identities=15%  Similarity=0.110  Sum_probs=65.2

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc-CCCEE-E-cCCCC--CccHHHHHHHHcCCCccEEEE
Q 018072          197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GVTDF-V-NTSEH--DRPIQEVIAEMTNGGVDRSVE  271 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~-G~~~v-v-~~~~~--~~~~~~~i~~~~~~g~Dvvid  271 (361)
                      .+|||+|+|. |-.+-.+++....++++.++.+++-.++++++ +.... . |..-.  -.+-.+.++.... +||+||-
T Consensus        78 k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~-~fDvIi~  155 (282)
T COG0421          78 KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEE-KFDVIIV  155 (282)
T ss_pred             CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCC-cCCEEEE
Confidence            5999997754 55566777877778999999999999999883 22210 0 11110  0114445554433 7999886


Q ss_pred             ccCC----------hHHHHHHHHHhcCCCcEEEEE
Q 018072          272 CTGN----------IDNMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       272 ~~g~----------~~~~~~~~~~l~~~~G~iv~~  296 (361)
                      -+..          .+.++.+-+.|+++ |.++.-
T Consensus       156 D~tdp~gp~~~Lft~eFy~~~~~~L~~~-Gi~v~q  189 (282)
T COG0421         156 DSTDPVGPAEALFTEEFYEGCRRALKED-GIFVAQ  189 (282)
T ss_pred             cCCCCCCcccccCCHHHHHHHHHhcCCC-cEEEEe
Confidence            4432          35678999999998 998877

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.67  E-value=0.17  Score=45.10  Aligned_cols=80  Identities=28%  Similarity=0.306  Sum_probs=48.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEE-EcCChhhHHHH----HHcCCCE-EEcCCCCC-ccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIG-VDRSSKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~-~~~~~~~~~~~----~~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~  264 (361)
                      ++.+++|+|+ |++|...+..+...|. +|+. ..++.++.+.+    +..+... .+..+-.+ ..+...+.+...  +
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG   81 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4578999988 9999999998888898 6655 46666554332    3334432 22222222 123333333221  3


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      ++|++|++.|.
T Consensus        82 ~id~vi~~ag~   92 (250)
T PRK08063         82 RLDVFVNNAAS   92 (250)
T ss_pred             CCCEEEECCCC
Confidence            68999999873

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=94.66  E-value=0.28  Score=45.53  Aligned_cols=89  Identities=13%  Similarity=0.187  Sum_probs=56.8

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChH
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  277 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~  277 (361)
                      +|.|+|.|.+|...+.-+...|. +|++.++++++.+.+.+.|....   .  +  ..+....+  ...|+|+-++... 
T Consensus         2 ~Ig~IGlG~mG~~la~~L~~~g~-~V~~~dr~~~~~~~l~~~g~~~~---~--s--~~~~~~~~--~~~dvIi~~vp~~-   70 (298)
T TIGR00872         2 QLGLIGLGRMGANIVRRLAKRGH-DCVGYDHDQDAVKAMKEDRTTGV---A--N--LRELSQRL--SAPRVVWVMVPHG-   70 (298)
T ss_pred             EEEEEcchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCccc---C--C--HHHHHhhc--CCCCEEEEEcCch-
Confidence            58899999999988887777888 89999999999988887664321   1  1  22222111  1468888887764 


Q ss_pred             HHHHH----HHHhcCCCcEEEEEcC
Q 018072          278 NMISA----FECVHDGWGVAVLVGV  298 (361)
Q Consensus       278 ~~~~~----~~~l~~~~G~iv~~g~  298 (361)
                      .....    ...+.++ -.++.++.
T Consensus        71 ~~~~v~~~l~~~l~~g-~ivid~st   94 (298)
T TIGR00872        71 IVDAVLEELAPTLEKG-DIVIDGGN   94 (298)
T ss_pred             HHHHHHHHHHhhCCCC-CEEEECCC
Confidence            33333    3334443 44555443

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=94.65  E-value=0.24  Score=45.38  Aligned_cols=89  Identities=19%  Similarity=0.227  Sum_probs=64.7

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhh-HHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR-FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  276 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~-~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~  276 (361)
                      +|..+|.|.+|.-.++=+...|. .|.+.+++++| .+.+++.|+...-.       ..+.+     ...|+||-++.++
T Consensus         2 kIafIGLG~MG~pmA~~L~~aG~-~v~v~~r~~~ka~~~~~~~Ga~~a~s-------~~eaa-----~~aDvVitmv~~~   68 (286)
T COG2084           2 KIAFIGLGIMGSPMAANLLKAGH-EVTVYNRTPEKAAELLAAAGATVAAS-------PAEAA-----AEADVVITMLPDD   68 (286)
T ss_pred             eEEEEcCchhhHHHHHHHHHCCC-EEEEEeCChhhhhHHHHHcCCcccCC-------HHHHH-----HhCCEEEEecCCH
Confidence            57889999999999999999998 99999999999 88888888864221       12222     1478888888887


Q ss_pred             HHHHHHH-------HHhcCCCcEEEEEcCCC
Q 018072          277 DNMISAF-------ECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       277 ~~~~~~~-------~~l~~~~G~iv~~g~~~  300 (361)
                      +.++..+       +.++++ ..++.++..+
T Consensus        69 ~~V~~V~~g~~g~~~~~~~G-~i~IDmSTis   98 (286)
T COG2084          69 AAVRAVLFGENGLLEGLKPG-AIVIDMSTIS   98 (286)
T ss_pred             HHHHHHHhCccchhhcCCCC-CEEEECCCCC
Confidence            7665554       234455 6677776544

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=94.63  E-value=0.38  Score=45.21  Aligned_cols=93  Identities=18%  Similarity=0.045  Sum_probs=62.5

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEE--c------CCCCCccHHHHHHHHcCCCccE
Q 018072          197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV--N------TSEHDRPIQEVIAEMTNGGVDR  268 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv--~------~~~~~~~~~~~i~~~~~~g~Dv  268 (361)
                      -+|.|+|+|.+|.+.+..+...|. .|.++++++++.+.+.+.+.....  .      ....+ +..+.+     +..|+
T Consensus         5 m~I~iIG~G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~-~~~e~~-----~~aD~   77 (328)
T PRK14618          5 MRVAVLGAGAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERENREYLPGVALPAELYPTA-DPEEAL-----AGADF   77 (328)
T ss_pred             CeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeC-CHHHHH-----cCCCE
Confidence            479999999999999988888888 899999998887777654211000  0      00000 122211     25899


Q ss_pred             EEEccCChHHHHHHHHHhcCCCcEEEEEcC
Q 018072          269 SVECTGNIDNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       269 vid~~g~~~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      ||-++... .++..++.+++. -.++.+..
T Consensus        78 Vi~~v~~~-~~~~v~~~l~~~-~~vi~~~~  105 (328)
T PRK14618         78 AVVAVPSK-ALRETLAGLPRA-LGYVSCAK  105 (328)
T ss_pred             EEEECchH-HHHHHHHhcCcC-CEEEEEee
Confidence            99999884 567777888875 56665543

>PRK08278 short chain dehydrogenase; Provisional

Probab=94.62  E-value=0.21  Score=45.54  Aligned_cols=79  Identities=23%  Similarity=0.354  Sum_probs=48.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhh-------HH----HHHHcCCCE-E--EcCCCCCccHHHHHH
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-------FE----EAKKFGVTD-F--VNTSEHDRPIQEVIA  259 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~-------~~----~~~~~G~~~-v--v~~~~~~~~~~~~i~  259 (361)
                      .+.+++|+|+ |++|...++.+...|+ +|++++++.++       ++    .++..+... .  .|..+.+ .+.+.+.
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~-~i~~~~~   82 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDED-QVAAAVA   82 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHH-HHHHHHH
Confidence            4578999998 9999999998888898 88888876542       11    122344432 2  2332221 2333333


Q ss_pred             HHcC--CCccEEEEccCC
Q 018072          260 EMTN--GGVDRSVECTGN  275 (361)
Q Consensus       260 ~~~~--~g~Dvvid~~g~  275 (361)
                      ....  +.+|++|+++|.
T Consensus        83 ~~~~~~g~id~li~~ag~  100 (273)
T PRK08278         83 KAVERFGGIDICVNNASA  100 (273)
T ss_pred             HHHHHhCCCCEEEECCCC
Confidence            2211  368999999874

>PLN02256 arogenate dehydrogenase

Probab=94.61  E-value=0.31  Score=45.36  Aligned_cols=90  Identities=18%  Similarity=0.224  Sum_probs=58.0

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  273 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~  273 (361)
                      ..+.+|.|+|.|.+|...+..++..|. .|+++++++. .+.+.++|+..   ..+    ..+.+    ....|+||-++
T Consensus        34 ~~~~kI~IIG~G~mG~slA~~L~~~G~-~V~~~d~~~~-~~~a~~~gv~~---~~~----~~e~~----~~~aDvVilav  100 (304)
T PLN02256         34 SRKLKIGIVGFGNFGQFLAKTFVKQGH-TVLATSRSDY-SDIAAELGVSF---FRD----PDDFC----EEHPDVVLLCT  100 (304)
T ss_pred             CCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECccH-HHHHHHcCCee---eCC----HHHHh----hCCCCEEEEec
Confidence            455789999999999998888888887 8999988864 45666677632   111    22221    12478888888


Q ss_pred             CChHHHHHHHHH-----hcCCCcEEEEEcC
Q 018072          274 GNIDNMISAFEC-----VHDGWGVAVLVGV  298 (361)
Q Consensus       274 g~~~~~~~~~~~-----l~~~~G~iv~~g~  298 (361)
                      ... .+...++.     ++++ ..++.++.
T Consensus       101 p~~-~~~~vl~~l~~~~l~~~-~iviDv~S  128 (304)
T PLN02256        101 SIL-STEAVLRSLPLQRLKRS-TLFVDVLS  128 (304)
T ss_pred             CHH-HHHHHHHhhhhhccCCC-CEEEecCC
Confidence            763 33433333     3454 55666655

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.56  E-value=0.2  Score=44.42  Aligned_cols=79  Identities=23%  Similarity=0.320  Sum_probs=48.6

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEE-cCChhhHHHHHH----cCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKRFEEAKK----FGVTD-FVNTSEHD-RPIQEVIAEMTN--GG  265 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~-~~~~~~~~~~~~----~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g  265 (361)
                      +.++||+|+ |++|...+..+...|+ +|+.+ ++++++.+.+..    .+... ++..+-.+ ..+.+.+.....  ++
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGK   83 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            468999988 9999998888777898 78777 888776544322    23222 22222122 123333333222  26


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++|.+.|.
T Consensus        84 id~vi~~ag~   93 (247)
T PRK05565         84 IDILVNNAGI   93 (247)
T ss_pred             CCEEEECCCc
Confidence            9999998874

>PRK07411 hypothetical protein; Validated

Probab=94.55  E-value=0.37  Score=46.55  Aligned_cols=34  Identities=32%  Similarity=0.275  Sum_probs=30.6

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  229 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~  229 (361)
                      ..+|+|+|+|++|..+++.+.+.|..+++.+|.+
T Consensus        38 ~~~VlivG~GGlG~~va~~La~~Gvg~l~lvD~D   71 (390)
T PRK07411         38 AASVLCIGTGGLGSPLLLYLAAAGIGRIGIVDFD   71 (390)
T ss_pred             cCcEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            3689999999999999999999999899888765

>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot

Probab=94.55  E-value=0.61  Score=36.46  Aligned_cols=89  Identities=21%  Similarity=0.314  Sum_probs=62.0

Q ss_pred             EEEEEcCCHHHHHHHHHHHHc--CCCeEEEEcCChhhHHHH-HHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072          198 SVAVFGLGAVGLAAAEGARIA--GASRIIGVDRSSKRFEEA-KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~--g~~~Vi~~~~~~~~~~~~-~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      +|.|+|+|..|......+...  +.+-+-++++++++.+.+ +++|.. .+  .+    +.+.+..   ..+|+|+.++.
T Consensus         2 ~v~iiG~G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~~~-~~--~~----~~~ll~~---~~~D~V~I~tp   71 (120)
T PF01408_consen    2 RVGIIGAGSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYGIP-VY--TD----LEELLAD---EDVDAVIIATP   71 (120)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTSE-EE--SS----HHHHHHH---TTESEEEEESS
T ss_pred             EEEEECCcHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhccc-ch--hH----HHHHHHh---hcCCEEEEecC
Confidence            688999999999888766666  342334567888777764 567876 32  22    4333332   26999999999


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEcC
Q 018072          275 NIDNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       275 ~~~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      .....+.+..++..  |.-+++-.
T Consensus        72 ~~~h~~~~~~~l~~--g~~v~~EK   93 (120)
T PF01408_consen   72 PSSHAEIAKKALEA--GKHVLVEK   93 (120)
T ss_dssp             GGGHHHHHHHHHHT--TSEEEEES
T ss_pred             CcchHHHHHHHHHc--CCEEEEEc
Confidence            97788888888886  56666643

GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=94.54  E-value=0.26  Score=45.25  Aligned_cols=68  Identities=22%  Similarity=0.299  Sum_probs=49.3

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChH
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  277 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~  277 (361)
                      +|.|+|.|.+|...+..++..|. .|+++++++++.+.+.+.|....   ...+  . +.   .  ...|+||.|+....
T Consensus         2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~---~~~~--~-~~---~--~~aDlVilavp~~~   69 (279)
T PRK07417          2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDE---ASTD--L-SL---L--KDCDLVILALPIGL   69 (279)
T ss_pred             eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCccc---ccCC--H-hH---h--cCCCEEEEcCCHHH
Confidence            58899999999988888887887 89999999999988888775211   1111  1 11   1  25789999987633

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=94.53  E-value=1.3  Score=33.16  Aligned_cols=76  Identities=20%  Similarity=0.329  Sum_probs=50.1

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcC---CCeEE-EEcCChhhHHHHH-HcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEc
Q 018072          198 SVAVFGLGAVGLAAAEGARIAG---ASRII-GVDRSSKRFEEAK-KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  272 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g---~~~Vi-~~~~~~~~~~~~~-~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~  272 (361)
                      +|.|+|+|.+|.+.+.-+...|   . +|+ ++++++++.+.+. +++......      +..+.+.     ..|+||-+
T Consensus         1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~~~~~------~~~~~~~-----~advvila   68 (96)
T PF03807_consen    1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQATAD------DNEEAAQ-----EADVVILA   68 (96)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTEEESE------EHHHHHH-----HTSEEEE-
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhccccccC------ChHHhhc-----cCCEEEEE
Confidence            5778899999999999888888   5 777 5499999887774 566432210      1333332     37999999


Q ss_pred             cCChHHHHHHHHHh
Q 018072          273 TGNIDNMISAFECV  286 (361)
Q Consensus       273 ~g~~~~~~~~~~~l  286 (361)
                      +.. ..+...++.+
T Consensus        69 v~p-~~~~~v~~~i   81 (96)
T PF03807_consen   69 VKP-QQLPEVLSEI   81 (96)
T ss_dssp             S-G-GGHHHHHHHH
T ss_pred             ECH-HHHHHHHHHH
Confidence            977 4445444444

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>COG0673 MviM Predicted dehydrogenases and related proteins [General function prediction only]

Probab=94.53  E-value=0.44  Score=44.81  Aligned_cols=134  Identities=18%  Similarity=0.266  Sum_probs=82.8

Q ss_pred             EEEEEcCCHHH-HHHHHHHHHcC--CCeEEEEcCChhhHHH-HHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072          198 SVAVFGLGAVG-LAAAEGARIAG--ASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  273 (361)
Q Consensus       198 ~VlI~G~g~vG-~~a~~~a~~~g--~~~Vi~~~~~~~~~~~-~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~  273 (361)
                      +|.|+|+|.++ ...+..++..+  ...+-++++++++.+. ++++|....  +.+    +.+.+   ....+|+|+.++
T Consensus         5 rvgiiG~G~~~~~~~~~~~~~~~~~~~~vav~d~~~~~a~~~a~~~~~~~~--~~~----~~~ll---~~~~iD~V~Iat   75 (342)
T COG0673           5 RVGIIGAGGIAGKAHLPALAALGGGLELVAVVDRDPERAEAFAEEFGIAKA--YTD----LEELL---ADPDIDAVYIAT   75 (342)
T ss_pred             EEEEEcccHHHHHHhHHHHHhCCCceEEEEEecCCHHHHHHHHHHcCCCcc--cCC----HHHHh---cCCCCCEEEEcC
Confidence            68899997554 55666666655  3456666888888554 566887622  221    33332   223699999999


Q ss_pred             CChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecCh-hhhc--cccEEEEeeecCCCcCCcHHHHHHHHHcCCc
Q 018072          274 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKVI  344 (361)
Q Consensus       274 g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~~--~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l  344 (361)
                      .+..-.+.+.+.|..  |+=|++-.+-....-.... ...-  +++.+.-.+..++  ...+.++-+++.+|+|
T Consensus        76 p~~~H~e~~~~AL~a--GkhVl~EKPla~t~~ea~~l~~~a~~~~~~l~v~~~~Rf--~p~~~~~k~li~~g~l  145 (342)
T COG0673          76 PNALHAELALAALEA--GKHVLCEKPLALTLEEAEELVELARKAGVKLMVGFNRRF--DPAVQALKELIDSGAL  145 (342)
T ss_pred             CChhhHHHHHHHHhc--CCEEEEcCCCCCCHHHHHHHHHHHHHcCCceeeehhhhc--CHHHHHHHHHHhcCCc
Confidence            998888999999986  6778885443222111111 1111  3444443333333  3678899999999866

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=94.52  E-value=0.88  Score=41.98  Aligned_cols=39  Identities=26%  Similarity=0.307  Sum_probs=34.4

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 018072          197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA  236 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~  236 (361)
                      .+|.|+|+|.+|...++.+...|. +|+.+++++++++.+
T Consensus         4 ~~I~ViGaG~mG~~iA~~la~~G~-~V~l~d~~~~~l~~~   42 (291)
T PRK06035          4 KVIGVVGSGVMGQGIAQVFARTGY-DVTIVDVSEEILKNA   42 (291)
T ss_pred             cEEEEECccHHHHHHHHHHHhcCC-eEEEEeCCHHHHHHH
Confidence            479999999999999888888898 899999999887654

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=94.51  E-value=0.4  Score=41.66  Aligned_cols=34  Identities=32%  Similarity=0.474  Sum_probs=30.0

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  229 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~  229 (361)
                      ..+|+|+|+|++|...+.-+...|..+++.+|.+
T Consensus        19 ~s~VlviG~gglGsevak~L~~~GVg~i~lvD~d   52 (198)
T cd01485          19 SAKVLIIGAGALGAEIAKNLVLAGIDSITIVDHR   52 (198)
T ss_pred             hCcEEEECCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence            3689999999999999999999999889888755

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>PRK14902 16S rRNA methyltransferase B; Provisional

Probab=94.51  E-value=0.35  Score=47.55  Aligned_cols=103  Identities=17%  Similarity=0.299  Sum_probs=63.7

Q ss_pred             hhcCCCCCCEEEEEcCCHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcC
Q 018072          189 NVAKPERGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN  263 (361)
Q Consensus       189 ~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~-g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~  263 (361)
                      ...++++|++||=+|+|+ |..++.+++.. +..+|+++|.++++++.+++    +|.+. +.....+  ..+....+ .
T Consensus       244 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~~v~avDi~~~~l~~~~~n~~~~g~~~-v~~~~~D--~~~~~~~~-~  318 (444)
T PRK14902        244 PALDPKGGDTVLDACAAP-GGKTTHIAELLKNTGKVVALDIHEHKLKLIEENAKRLGLTN-IETKALD--ARKVHEKF-A  318 (444)
T ss_pred             HHhCCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCe-EEEEeCC--cccccchh-c
Confidence            345678899988888755 45555666655 23489999999998877644    56654 2222222  11111111 1


Q ss_pred             CCccEEEEc---cCC-------------------------hHHHHHHHHHhcCCCcEEEEEc
Q 018072          264 GGVDRSVEC---TGN-------------------------IDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       264 ~g~Dvvid~---~g~-------------------------~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      +.||+|+-.   +|.                         ...+..+.+.|+++ |+++...
T Consensus       319 ~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpG-G~lvyst  379 (444)
T PRK14902        319 EKFDKILVDAPCSGLGVIRRKPDIKYNKTKEDIESLQEIQLEILESVAQYLKKG-GILVYST  379 (444)
T ss_pred             ccCCEEEEcCCCCCCeeeccCcchhhcCCHHHHHHHHHHHHHHHHHHHHHcCCC-CEEEEEc
Confidence            468998752   221                         13577888999997 9988654

>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed

Probab=94.51  E-value=0.18  Score=44.65  Aligned_cols=105  Identities=15%  Similarity=0.183  Sum_probs=67.0

Q ss_pred             hhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHHcCCC----EEEcCCCCCccHHHHHHHHcC
Q 018072          189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKFGVT----DFVNTSEHDRPIQEVIAEMTN  263 (361)
Q Consensus       189 ~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g-~~~Vi~~~~~~~~~~~~~~~G~~----~vv~~~~~~~~~~~~i~~~~~  263 (361)
                      .....+++.+||-+|+|. |..+..+++..+ ..+++++|.+++..+.+++.-..    ..+.....+  +.+.  ....
T Consensus        45 ~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d--~~~~--~~~~  119 (239)
T PRK00216         45 KWLGVRPGDKVLDLACGT-GDLAIALAKAVGKTGEVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQGD--AEAL--PFPD  119 (239)
T ss_pred             HHhCCCCCCeEEEeCCCC-CHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHhhcccccccCeEEEecc--cccC--CCCC
Confidence            344566788999999987 788888888775 23999999999888887663211    111111111  1100  0122


Q ss_pred             CCccEEEEcc------CChHHHHHHHHHhcCCCcEEEEEcCC
Q 018072          264 GGVDRSVECT------GNIDNMISAFECVHDGWGVAVLVGVP  299 (361)
Q Consensus       264 ~g~Dvvid~~------g~~~~~~~~~~~l~~~~G~iv~~g~~  299 (361)
                      +.+|+|+...      .....+..+.+.|+++ |+++++...
T Consensus       120 ~~~D~I~~~~~l~~~~~~~~~l~~~~~~L~~g-G~li~~~~~  160 (239)
T PRK00216        120 NSFDAVTIAFGLRNVPDIDKALREMYRVLKPG-GRLVILEFS  160 (239)
T ss_pred             CCccEEEEecccccCCCHHHHHHHHHHhccCC-cEEEEEEec
Confidence            3689987532      1234677888999998 999887543

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=94.50  E-value=0.11  Score=47.07  Aligned_cols=76  Identities=21%  Similarity=0.275  Sum_probs=48.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCE-EEcCCCCCccHHHHHHHHcC--CCccEEE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTN--GGVDRSV  270 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~-vv~~~~~~~~~~~~i~~~~~--~g~Dvvi  270 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.   ..... ..|..+. ..+.+.+.....  +.+|++|
T Consensus         8 ~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~---~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~id~li   82 (266)
T PRK06171          8 QGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH---ENYQFVPTDVSSA-EEVNHTVAEIIEKFGRIDGLV   82 (266)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc---CceEEEEccCCCH-HHHHHHHHHHHHHcCCCCEEE
Confidence            3678999987 9999999999888998 88888887765431   11111 1232222 123333333322  3689999


Q ss_pred             EccCC
Q 018072          271 ECTGN  275 (361)
Q Consensus       271 d~~g~  275 (361)
                      +++|.
T Consensus        83 ~~Ag~   87 (266)
T PRK06171         83 NNAGI   87 (266)
T ss_pred             ECCcc
Confidence            99873

>PRK09135 pteridine reductase; Provisional

Probab=94.50  E-value=0.24  Score=44.03  Aligned_cols=79  Identities=18%  Similarity=0.182  Sum_probs=47.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHHH----HcCC-C-EEEcCCCCC-ccHHHHHHHHcC--
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS-KRFEEAK----KFGV-T-DFVNTSEHD-RPIQEVIAEMTN--  263 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~-~~~~~~~----~~G~-~-~vv~~~~~~-~~~~~~i~~~~~--  263 (361)
                      .+.++||+|+ |.+|...++.+...|. +|++++++. ++.+.+.    +.+. . ..+..+-.+ ..+.+.+.....  
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   83 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF   83 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4578999998 9999999988888898 888887753 3333322    2211 1 122222222 123333333211  


Q ss_pred             CCccEEEEccC
Q 018072          264 GGVDRSVECTG  274 (361)
Q Consensus       264 ~g~Dvvid~~g  274 (361)
                      +++|+||+++|
T Consensus        84 ~~~d~vi~~ag   94 (249)
T PRK09135         84 GRLDALVNNAS   94 (249)
T ss_pred             CCCCEEEECCC
Confidence            36899999987

>PRK05650 short chain dehydrogenase; Provisional

Probab=94.49  E-value=0.2  Score=45.40  Aligned_cols=77  Identities=22%  Similarity=0.268  Sum_probs=48.7

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCE-EEcCCCCC-ccHHHHHHHHcC--CCccE
Q 018072          198 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMTN--GGVDR  268 (361)
Q Consensus       198 ~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g~Dv  268 (361)
                      +++|+|+ |++|...+..+...|. +|+.++++.++.+.+    +..+.+. .+..+-.+ .++.+.+.....  +++|+
T Consensus         2 ~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          2 RVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6899988 9999999988888898 899998888765543    2233332 22122122 123333332221  37899


Q ss_pred             EEEccCC
Q 018072          269 SVECTGN  275 (361)
Q Consensus       269 vid~~g~  275 (361)
                      +|+++|.
T Consensus        81 lI~~ag~   87 (270)
T PRK05650         81 IVNNAGV   87 (270)
T ss_pred             EEECCCC
Confidence            9999874

>PLN02490 MPBQ/MSBQ methyltransferase

Probab=94.48  E-value=0.23  Score=46.89  Aligned_cols=97  Identities=22%  Similarity=0.279  Sum_probs=63.8

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHH--cCCCccEEEE
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEM--TNGGVDRSVE  271 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~--~~~g~Dvvid  271 (361)
                      .++.+||=+|+|. |..+..+++..+..+|+++|.+++-++.+++.....-+.....+      +..+  .++.||+|+.
T Consensus       112 ~~~~~VLDLGcGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i~~i~gD------~e~lp~~~~sFDvVIs  184 (340)
T PLN02490        112 DRNLKVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIIEGD------AEDLPFPTDYADRYVS  184 (340)
T ss_pred             CCCCEEEEEecCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCCeEEecc------HHhCCCCCCceeEEEE
Confidence            5678999999876 77777778776545899999999888887763211101111111      1111  2236999887


Q ss_pred             cc------CChHHHHHHHHHhcCCCcEEEEEcC
Q 018072          272 CT------GNIDNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       272 ~~------g~~~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      +-      .....+..+.+.|+++ |++++.+.
T Consensus       185 ~~~L~~~~d~~~~L~e~~rvLkPG-G~LvIi~~  216 (340)
T PLN02490        185 AGSIEYWPDPQRGIKEAYRVLKIG-GKACLIGP  216 (340)
T ss_pred             cChhhhCCCHHHHHHHHHHhcCCC-cEEEEEEe
Confidence            43      1234678899999998 99988753

>PLN02233 ubiquinone biosynthesis methyltransferase

Probab=94.46  E-value=0.5  Score=42.91  Aligned_cols=103  Identities=16%  Similarity=0.235  Sum_probs=66.9

Q ss_pred             hhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHHc-C------CCE--EEcCCCCCccHHHHH
Q 018072          189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKF-G------VTD--FVNTSEHDRPIQEVI  258 (361)
Q Consensus       189 ~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~~-G------~~~--vv~~~~~~~~~~~~i  258 (361)
                      +..+++++++||-+|+|. |..+..+++..+. .+|+++|.+++-++.+++. .      .+.  ++.-+..+  +    
T Consensus        67 ~~~~~~~~~~VLDlGcGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~~~--l----  139 (261)
T PLN02233         67 SWSGAKMGDRVLDLCCGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDATD--L----  139 (261)
T ss_pred             HHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEccccc--C----
Confidence            345678899999999865 5567777777653 3899999999988887642 1      111  11111111  0    


Q ss_pred             HHHcCCCccEEEEccC------ChHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072          259 AEMTNGGVDRSVECTG------NIDNMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       259 ~~~~~~g~Dvvid~~g------~~~~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                       .+.++.||+|+-..+      ....+..+.+.|+++ |+++++-...
T Consensus       140 -p~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpG-G~l~i~d~~~  185 (261)
T PLN02233        140 -PFDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPG-SRVSILDFNK  185 (261)
T ss_pred             -CCCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcC-cEEEEEECCC
Confidence             112236899976432      234678899999998 9998876544

>PRK11579 putative oxidoreductase; Provisional

Probab=94.43  E-value=0.93  Score=42.94  Aligned_cols=132  Identities=16%  Similarity=0.146  Sum_probs=76.4

Q ss_pred             CEEEEEcCCHHHH-HHHHHHHH-cCCCeEE-EEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072          197 SSVAVFGLGAVGL-AAAEGARI-AGASRII-GVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  273 (361)
Q Consensus       197 ~~VlI~G~g~vG~-~a~~~a~~-~g~~~Vi-~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~  273 (361)
                      -+|.|+|.|.+|. ..+...+. -+. +++ +.++++++.+  .+++...++  .  +  +.+.+   .+..+|+|+.++
T Consensus         5 irvgiiG~G~i~~~~~~~~~~~~~~~-~l~av~d~~~~~~~--~~~~~~~~~--~--~--~~ell---~~~~vD~V~I~t   72 (346)
T PRK11579          5 IRVGLIGYGYASKTFHAPLIAGTPGL-ELAAVSSSDATKVK--ADWPTVTVV--S--E--PQHLF---NDPNIDLIVIPT   72 (346)
T ss_pred             ceEEEECCCHHHHHHHHHHHhhCCCC-EEEEEECCCHHHHH--hhCCCCcee--C--C--HHHHh---cCCCCCEEEEcC
Confidence            4799999999986 44554443 366 555 4566655543  334322221  1  1  33333   223799999999


Q ss_pred             CChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecCh-hhh-c-cccEEEEeeecCCCcCCcHHHHHHHHHcCCc
Q 018072          274 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INV-L-NERTLKGTFFGNYKPRTDLPSVVDMYMNKVI  344 (361)
Q Consensus       274 g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~-~-~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l  344 (361)
                      ....-.+.+..+|..  |+=|++-.+-....-.... ... . +++.+.-.+..++  ...+..+-+++++|.|
T Consensus        73 p~~~H~~~~~~al~a--GkhVl~EKPla~t~~ea~~l~~~a~~~g~~l~v~~~~R~--~p~~~~~k~~i~~g~i  142 (346)
T PRK11579         73 PNDTHFPLAKAALEA--GKHVVVDKPFTVTLSQARELDALAKSAGRVLSVFHNRRW--DSDFLTLKALLAEGVL  142 (346)
T ss_pred             CcHHHHHHHHHHHHC--CCeEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEeeccC--CHHHHHHHHHHhcCCC
Confidence            998888899988876  6777775433111111111 111 1 4555543333333  3578888888988876

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=94.43  E-value=0.26  Score=47.72  Aligned_cols=76  Identities=21%  Similarity=0.271  Sum_probs=48.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCC-EEEcCCCCCccHHHHHHHHcCCCccEEEE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVT-DFVNTSEHDRPIQEVIAEMTNGGVDRSVE  271 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~~-~vv~~~~~~~~~~~~i~~~~~~g~Dvvid  271 (361)
                      .+.+++|+|+ |++|.+.+..+...|. +|+++++++++++... +.+.. ..+..+-.+  . +.+.+.. +++|++|+
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd--~-~~v~~~l-~~IDiLIn  251 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQVGQ--E-AALAELL-EKVDILII  251 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCC--H-HHHHHHh-CCCCEEEE
Confidence            4679999998 9999999998888898 8998988877654322 11111 122222222  1 2233322 36999999


Q ss_pred             ccCC
Q 018072          272 CTGN  275 (361)
Q Consensus       272 ~~g~  275 (361)
                      +.|.
T Consensus       252 nAGi  255 (406)
T PRK07424        252 NHGI  255 (406)
T ss_pred             CCCc
Confidence            8874

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=94.42  E-value=0.26  Score=45.82  Aligned_cols=44  Identities=27%  Similarity=0.447  Sum_probs=37.4

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT  242 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~  242 (361)
                      +|.|+|.|.+|...+.-+...|. +|++.++++++.+.+.+.|+.
T Consensus         2 ~Ig~IGlG~MG~~mA~~L~~~g~-~v~v~dr~~~~~~~~~~~g~~   45 (301)
T PRK09599          2 QLGMIGLGRMGGNMARRLLRGGH-EVVGYDRNPEAVEALAEEGAT   45 (301)
T ss_pred             EEEEEcccHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHCCCe
Confidence            58899999999988887777888 899999999998888777653

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=94.42  E-value=0.43  Score=38.30  Aligned_cols=94  Identities=18%  Similarity=0.311  Sum_probs=57.2

Q ss_pred             EEEEcC-CHHHHHHHHHHHHcC--CCeEEEEcCChh--h-HHHHHHcCCCEEEcCCCCC-ccHH----------------
Q 018072          199 VAVFGL-GAVGLAAAEGARIAG--ASRIIGVDRSSK--R-FEEAKKFGVTDFVNTSEHD-RPIQ----------------  255 (361)
Q Consensus       199 VlI~G~-g~vG~~a~~~a~~~g--~~~Vi~~~~~~~--~-~~~~~~~G~~~vv~~~~~~-~~~~----------------  255 (361)
                      |.|+|+ |.+|..++++.+...  + +|++...+..  + .++++++.+..+...+... ..+.                
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~   79 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGP   79 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESH
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeCh
Confidence            578898 999999999999987  5 6776655443  2 3445678888776654422 0111                


Q ss_pred             HHHHHHcC-CCccEEEEccCChHHHHHHHHHhcCCCcEEE
Q 018072          256 EVIAEMTN-GGVDRSVECTGNIDNMISAFECVHDGWGVAV  294 (361)
Q Consensus       256 ~~i~~~~~-~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv  294 (361)
                      +.+.++.. ..+|+|+.+.-+-..+.-.+..++.+ -++.
T Consensus        80 ~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~g-k~ia  118 (129)
T PF02670_consen   80 EGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAG-KDIA  118 (129)
T ss_dssp             HHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTT-SEEE
T ss_pred             HHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCC-CeEE
Confidence            11223333 26788888766667777777777764 4443

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional

Probab=94.39  E-value=0.21  Score=51.63  Aligned_cols=77  Identities=23%  Similarity=0.262  Sum_probs=53.8

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChh---------------------hHHHHHHcCCCEEEcCCCC-C
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK---------------------RFEEAKKFGVTDFVNTSEH-D  251 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~---------------------~~~~~~~~G~~~vv~~~~~-~  251 (361)
                      +.+++|+|+|+|+.|+.++..+...|. +|++++.++.                     ..+.++++|++...+.... +
T Consensus       191 ~~~k~VaIIGaGpAGl~aA~~La~~G~-~Vtv~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~Gv~i~~~~~v~~d  269 (652)
T PRK12814        191 KSGKKVAIIGAGPAGLTAAYYLLRKGH-DVTIFDANEQAGGMMRYGIPRFRLPESVIDADIAPLRAMGAEFRFNTVFGRD  269 (652)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-cEEEEecCCCCCceeeecCCCCCCCHHHHHHHHHHHHHcCCEEEeCCcccCc
Confidence            467899999999999999999999998 7888877643                     1455677888765554311 1


Q ss_pred             ccHHHHHHHHcCCCccEEEEccCCh
Q 018072          252 RPIQEVIAEMTNGGVDRSVECTGNI  276 (361)
Q Consensus       252 ~~~~~~i~~~~~~g~Dvvid~~g~~  276 (361)
                      ... +.+.    ..+|.||-++|..
T Consensus       270 v~~-~~~~----~~~DaVilAtGa~  289 (652)
T PRK12814        270 ITL-EELQ----KEFDAVLLAVGAQ  289 (652)
T ss_pred             cCH-HHHH----hhcCEEEEEcCCC
Confidence            111 1111    1489999998864

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=94.39  E-value=0.63  Score=45.36  Aligned_cols=73  Identities=23%  Similarity=0.367  Sum_probs=51.1

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHH---------cC-CCc
Q 018072          197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEM---------TN-GGV  266 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~---------~~-~g~  266 (361)
                      .+|.|+|.|-+|...+..+...|. +|+++++++++.+.++. |...+   ....  ..+.+++.         +. ...
T Consensus         4 ~kI~VIGlG~~G~~~A~~La~~G~-~V~~~D~~~~~v~~l~~-g~~~~---~e~~--l~~~l~~~~~~g~l~~~~~~~~a   76 (415)
T PRK11064          4 ETISVIGLGYIGLPTAAAFASRQK-QVIGVDINQHAVDTINR-GEIHI---VEPD--LDMVVKTAVEGGYLRATTTPEPA   76 (415)
T ss_pred             cEEEEECcchhhHHHHHHHHhCCC-EEEEEeCCHHHHHHHHC-CCCCc---CCCC--HHHHHHHHhhcCceeeecccccC
Confidence            479999999999998888888898 99999999999987653 33221   1211  33333221         11 157


Q ss_pred             cEEEEccCCh
Q 018072          267 DRSVECTGNI  276 (361)
Q Consensus       267 Dvvid~~g~~  276 (361)
                      |+||-|++.+
T Consensus        77 Dvvii~vptp   86 (415)
T PRK11064         77 DAFLIAVPTP   86 (415)
T ss_pred             CEEEEEcCCC
Confidence            9999999985

>PRK12747 short chain dehydrogenase; Provisional

Probab=94.37  E-value=0.8  Score=40.88  Aligned_cols=104  Identities=16%  Similarity=0.137  Sum_probs=60.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEc-CChhhHHHH----HHcCCCE-E--EcCCCCC--ccHHHHHHHH--
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD-RSSKRFEEA----KKFGVTD-F--VNTSEHD--RPIQEVIAEM--  261 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~-~~~~~~~~~----~~~G~~~-v--v~~~~~~--~~~~~~i~~~--  261 (361)
                      .+.+++|+|+ +++|...++.+...|+ +|+.+. +++++.+.+    ++.+... .  .|..+.+  ..+.+.+.+.  
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   81 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence            4678999987 8999999998888998 777653 444443322    2223321 1  1222211  1122222221  


Q ss_pred             --cC-CCccEEEEccCChH----------HH---------------HHHHHHhcCCCcEEEEEcCCC
Q 018072          262 --TN-GGVDRSVECTGNID----------NM---------------ISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       262 --~~-~g~Dvvid~~g~~~----------~~---------------~~~~~~l~~~~G~iv~~g~~~  300 (361)
                        .. +++|++++++|...          .+               ..+++.+... |+++.++...
T Consensus        82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~-g~iv~isS~~  147 (252)
T PRK12747         82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDN-SRIINISSAA  147 (252)
T ss_pred             hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcC-CeEEEECCcc
Confidence              11 26899999987310          11               2355566776 9999987654

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=94.36  E-value=0.19  Score=46.45  Aligned_cols=71  Identities=20%  Similarity=0.240  Sum_probs=50.3

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChH
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  277 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~  277 (361)
                      +|.|+|.|.+|...+..+...|. +|+++++++++.+.+.+.|....     .+  +.+.+     ...|+||.++..+.
T Consensus         4 ~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~g~~~~-----~~--~~e~~-----~~~d~vi~~vp~~~   70 (296)
T PRK11559          4 KVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIAAGAETA-----ST--AKAVA-----EQCDVIITMLPNSP   70 (296)
T ss_pred             eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec-----CC--HHHHH-----hcCCEEEEeCCCHH
Confidence            68899999999987777777887 89999999998888877765311     11  22222     14688888887644


Q ss_pred             HHHH
Q 018072          278 NMIS  281 (361)
Q Consensus       278 ~~~~  281 (361)
                      ....
T Consensus        71 ~~~~   74 (296)
T PRK11559         71 HVKE   74 (296)
T ss_pred             HHHH
Confidence            4443

>PRK08223 hypothetical protein; Validated

Probab=94.36  E-value=0.24  Score=45.41  Aligned_cols=34  Identities=29%  Similarity=0.267  Sum_probs=30.4

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  229 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~  229 (361)
                      ..+|+|+|+|++|..+++.+.++|..++..+|.+
T Consensus        27 ~s~VlIvG~GGLGs~va~~LA~aGVG~i~lvD~D   60 (287)
T PRK08223         27 NSRVAIAGLGGVGGIHLLTLARLGIGKFTIADFD   60 (287)
T ss_pred             cCCEEEECCCHHHHHHHHHHHHhCCCeEEEEeCC
Confidence            4689999999999999999999999899888665

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=94.35  E-value=0.39  Score=44.31  Aligned_cols=70  Identities=16%  Similarity=0.142  Sum_probs=50.1

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChH
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  277 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~  277 (361)
                      +|.|+|.|.+|...+..+...|. +|+++++++++.+.+.+.|....     .+  ..+.+     ...|+||.++....
T Consensus         1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-----~~--~~~~~-----~~aDivi~~vp~~~   67 (291)
T TIGR01505         1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGAVTA-----ET--ARQVT-----EQADVIFTMVPDSP   67 (291)
T ss_pred             CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCccc-----CC--HHHHH-----hcCCEEEEecCCHH
Confidence            37789999999988887778888 89999999999988887775321     11  22222     14688888887644


Q ss_pred             HHH
Q 018072          278 NMI  280 (361)
Q Consensus       278 ~~~  280 (361)
                      ...
T Consensus        68 ~~~   70 (291)
T TIGR01505        68 QVE   70 (291)
T ss_pred             HHH
Confidence            433

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=94.35  E-value=0.36  Score=42.58  Aligned_cols=47  Identities=30%  Similarity=0.345  Sum_probs=39.4

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh----------hhHHHHHHcC
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS----------KRFEEAKKFG  240 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~----------~~~~~~~~~G  240 (361)
                      -.|.+|+|.|.|.+|..+++++...|.+.|.++|++.          +.++..++.+
T Consensus        21 l~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~~~   77 (217)
T cd05211          21 LEGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVALG   77 (217)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHHHHHHhhC
Confidence            3578999999999999999999999986777788887          7777766654

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral

>PRK14968 putative methyltransferase; Provisional

Probab=94.33  E-value=0.28  Score=41.73  Aligned_cols=43  Identities=33%  Similarity=0.505  Sum_probs=32.7

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH
Q 018072          193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK  238 (361)
Q Consensus       193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~  238 (361)
                      ..+++++|.+|+|. |..+..+++. +. +|++++.+++..+.+++
T Consensus        21 ~~~~~~vLd~G~G~-G~~~~~l~~~-~~-~v~~~D~s~~~~~~a~~   63 (188)
T PRK14968         21 DKKGDRVLEVGTGS-GIVAIVAAKN-GK-KVVGVDINPYAVECAKC   63 (188)
T ss_pred             ccCCCEEEEEcccc-CHHHHHHHhh-cc-eEEEEECCHHHHHHHHH
Confidence            37888999998754 5566666666 65 99999999988777643

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=94.31  E-value=0.23  Score=46.08  Aligned_cols=91  Identities=21%  Similarity=0.307  Sum_probs=57.3

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChH
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  277 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~  277 (361)
                      +|.++|.|.+|...+.-+...|. +|++.++++++.+.+.+.|+...    . +  ..+.+...  ...|+||-++..++
T Consensus         2 ~Ig~IGlG~mG~~mA~~L~~~g~-~v~v~dr~~~~~~~~~~~g~~~~----~-s--~~~~~~~~--~~advVi~~vp~~~   71 (299)
T PRK12490          2 KLGLIGLGKMGGNMAERLREDGH-EVVGYDVNQEAVDVAGKLGITAR----H-S--LEELVSKL--EAPRTIWVMVPAGE   71 (299)
T ss_pred             EEEEEcccHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHCCCeec----C-C--HHHHHHhC--CCCCEEEEEecCch
Confidence            57889999999988887777888 89999999999888877775321    1 1  22222111  12577887777653


Q ss_pred             HHHHHHH----HhcCCCcEEEEEcCC
Q 018072          278 NMISAFE----CVHDGWGVAVLVGVP  299 (361)
Q Consensus       278 ~~~~~~~----~l~~~~G~iv~~g~~  299 (361)
                      .++..+.    .++++ ..++.++..
T Consensus        72 ~~~~v~~~i~~~l~~g-~ivid~st~   96 (299)
T PRK12490         72 VTESVIKDLYPLLSPG-DIVVDGGNS   96 (299)
T ss_pred             HHHHHHHHHhccCCCC-CEEEECCCC
Confidence            4443332    23443 455555443

>PRK05855 short chain dehydrogenase; Validated

Probab=94.31  E-value=0.2  Score=50.70  Aligned_cols=79  Identities=22%  Similarity=0.248  Sum_probs=52.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-E--EcCCCCCccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-F--VNTSEHDRPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-v--v~~~~~~~~~~~~i~~~~~--~  264 (361)
                      .+.++||+|+ |++|...++.+...|. +|+.+++++++++.+.    +.|... .  .|..+. ..+.+.+.....  +
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~~~~~~~~~~~~~g  391 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREGA-EVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDA-DAMEAFAEWVRAEHG  391 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCH-HHHHHHHHHHHHhcC
Confidence            4578999988 9999999988888899 7999999987766543    234322 2  222222 123333333322  3


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      .+|++|+++|.
T Consensus       392 ~id~lv~~Ag~  402 (582)
T PRK05855        392 VPDIVVNNAGI  402 (582)
T ss_pred             CCcEEEECCcc
Confidence            68999999875

>PRK10901 16S rRNA methyltransferase B; Provisional

Probab=94.30  E-value=0.52  Score=46.10  Aligned_cols=103  Identities=16%  Similarity=0.258  Sum_probs=63.4

Q ss_pred             hhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcCC
Q 018072          189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNG  264 (361)
Q Consensus       189 ~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~~  264 (361)
                      ...++++|++||=+|+|+ |..+..++...+..+|+++|.++++++.+++    +|....+...+.. ...   .....+
T Consensus       238 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~v~a~D~s~~~l~~~~~n~~~~g~~~~~~~~D~~-~~~---~~~~~~  312 (427)
T PRK10901        238 TLLAPQNGERVLDACAAP-GGKTAHILELAPQAQVVALDIDAQRLERVRENLQRLGLKATVIVGDAR-DPA---QWWDGQ  312 (427)
T ss_pred             HHcCCCCCCEEEEeCCCC-ChHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEcCcc-cch---hhcccC
Confidence            345678999999888765 4455566665542489999999998877744    5554221111111 011   011123


Q ss_pred             CccEEEE---ccCC-------------------------hHHHHHHHHHhcCCCcEEEEEc
Q 018072          265 GVDRSVE---CTGN-------------------------IDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       265 g~Dvvid---~~g~-------------------------~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      .||.|+-   |.+.                         ...+..+.+.|+++ |+++..-
T Consensus       313 ~fD~Vl~D~Pcs~~G~~~~~p~~~~~~~~~~l~~l~~~q~~iL~~a~~~LkpG-G~lvyst  372 (427)
T PRK10901        313 PFDRILLDAPCSATGVIRRHPDIKWLRRPEDIAALAALQSEILDALWPLLKPG-GTLLYAT  372 (427)
T ss_pred             CCCEEEECCCCCcccccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEe
Confidence            6999884   2221                         13577888899997 9988654

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=94.27  E-value=0.22  Score=44.31  Aligned_cols=78  Identities=21%  Similarity=0.323  Sum_probs=46.8

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEE-cCChhh-H---HHHHHcCCCEEE---cCCCCCccHHHHHHHHcC--C
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKR-F---EEAKKFGVTDFV---NTSEHDRPIQEVIAEMTN--G  264 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~-~~~~~~-~---~~~~~~G~~~vv---~~~~~~~~~~~~i~~~~~--~  264 (361)
                      +.+++|+|+ |++|...++.+...|+ +|+.. ++++.+ .   +.+++.+.....   |..+.+ .+.+.+.+...  +
T Consensus         3 ~k~~lVtG~s~giG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~~   80 (246)
T PRK12938          3 QRIAYVTGGMGGIGTSICQRLHKDGF-KVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWD-STKAAFDKVKAEVG   80 (246)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHH-HHHHHHHHHHHHhC
Confidence            578899987 9999999999988998 66664 333332 2   222334554332   222211 23333333221  3


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      ++|++++++|.
T Consensus        81 ~id~li~~ag~   91 (246)
T PRK12938         81 EIDVLVNNAGI   91 (246)
T ss_pred             CCCEEEECCCC
Confidence            78999999985

>PRK12743 oxidoreductase; Provisional

Probab=94.27  E-value=0.26  Score=44.32  Aligned_cols=79  Identities=18%  Similarity=0.138  Sum_probs=47.5

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEc-CChhhHHH----HHHcCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD-RSSKRFEE----AKKFGVTD-FVNTSEHD-RPIQEVIAEMTN--GG  265 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~-~~~~~~~~----~~~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g  265 (361)
                      +.++||+|+ +++|...++.+...|+ +|+.+. ++.++.+.    ++..|... .+..+-.+ ..+...+.+...  +.
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGR   80 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            468999988 8999999999989999 776664 45444333    23345432 22222222 112233333222  26


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++|.++|.
T Consensus        81 id~li~~ag~   90 (256)
T PRK12743         81 IDVLVNNAGA   90 (256)
T ss_pred             CCEEEECCCC
Confidence            8999999873

>PRK12779 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional

Probab=94.27  E-value=0.16  Score=54.65  Aligned_cols=78  Identities=19%  Similarity=0.175  Sum_probs=55.1

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh---------------------hhHHHHHHcCCCEEEcCCCCCc
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS---------------------KRFEEAKKFGVTDFVNTSEHDR  252 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~---------------------~~~~~~~~~G~~~vv~~~~~~~  252 (361)
                      ..|.+|+|+|+|+.|+.++..+...|. .|+++++.+                     ...+.++++|.+...+..-..+
T Consensus       304 ~~gkkVaVIGsGPAGLsaA~~Lar~G~-~VtVfE~~~~~GG~l~yGIP~~rlp~~vi~~~i~~l~~~Gv~f~~n~~vG~d  382 (944)
T PRK12779        304 AVKPPIAVVGSGPSGLINAYLLAVEGF-PVTVFEAFHDLGGVLRYGIPEFRLPNQLIDDVVEKIKLLGGRFVKNFVVGKT  382 (944)
T ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCC-eEEEEeeCCCCCceEEccCCCCcChHHHHHHHHHHHHhhcCeEEEeEEeccE
Confidence            458999999999999999999999998 888887653                     2345667788876554332211


Q ss_pred             cHHHHHHHHcCCCccEEEEccCC
Q 018072          253 PIQEVIAEMTNGGVDRSVECTGN  275 (361)
Q Consensus       253 ~~~~~i~~~~~~g~Dvvid~~g~  275 (361)
                       +  .+.++...+||.||-++|.
T Consensus       383 -i--t~~~l~~~~yDAV~LAtGA  402 (944)
T PRK12779        383 -A--TLEDLKAAGFWKIFVGTGA  402 (944)
T ss_pred             -E--eHHHhccccCCEEEEeCCC
Confidence             1  1222322379999999986

>PRK13984 putative oxidoreductase; Provisional

Probab=94.27  E-value=0.22  Score=50.98  Aligned_cols=77  Identities=26%  Similarity=0.286  Sum_probs=54.7

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChh---------------------hHHHHHHcCCCEEEcCCCC-
Q 018072          193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK---------------------RFEEAKKFGVTDFVNTSEH-  250 (361)
Q Consensus       193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~---------------------~~~~~~~~G~~~vv~~~~~-  250 (361)
                      .+.+++|+|+|+|+.|+.++..++..|. +|+++++.+.                     ..+.++++|++..++..-. 
T Consensus       280 ~~~~~~v~IIGaG~aGl~aA~~L~~~G~-~v~vie~~~~~gG~~~~~i~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~  358 (604)
T PRK13984        280 EKKNKKVAIVGSGPAGLSAAYFLATMGY-EVTVYESLSKPGGVMRYGIPSYRLPDEALDKDIAFIEALGVKIHLNTRVGK  358 (604)
T ss_pred             ccCCCeEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceEeecCCcccCCHHHHHHHHHHHHHCCcEEECCCEeCC
Confidence            4678999999999999999999999998 7888866531                     2456677888765553321 


Q ss_pred             CccHHHHHHHHcCCCccEEEEccCC
Q 018072          251 DRPIQEVIAEMTNGGVDRSVECTGN  275 (361)
Q Consensus       251 ~~~~~~~i~~~~~~g~Dvvid~~g~  275 (361)
                      +.... .++    ..+|.+|.++|.
T Consensus       359 ~~~~~-~~~----~~yD~vilAtGa  378 (604)
T PRK13984        359 DIPLE-ELR----EKHDAVFLSTGF  378 (604)
T ss_pred             cCCHH-HHH----hcCCEEEEEcCc
Confidence            11121 221    269999999995

>PRK06701 short chain dehydrogenase; Provisional

Probab=94.26  E-value=0.27  Score=45.30  Aligned_cols=81  Identities=21%  Similarity=0.179  Sum_probs=48.6

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhh-HH----HHHHcCCCE-EEcCCCCC-ccHHHHHHHHcC--
Q 018072          194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-FE----EAKKFGVTD-FVNTSEHD-RPIQEVIAEMTN--  263 (361)
Q Consensus       194 ~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~-~~----~~~~~G~~~-vv~~~~~~-~~~~~~i~~~~~--  263 (361)
                      -.+.++||+|+ |++|...+..+...|+ +|+.+++++++ .+    .++..+... .+..+-.+ ..+.+.+.+...  
T Consensus        44 ~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~  122 (290)
T PRK06701         44 LKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVREL  122 (290)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            34678999998 9999999988888898 88888776432 22    222334332 22222222 123333333222  


Q ss_pred             CCccEEEEccCC
Q 018072          264 GGVDRSVECTGN  275 (361)
Q Consensus       264 ~g~Dvvid~~g~  275 (361)
                      +++|++|.++|.
T Consensus       123 ~~iD~lI~~Ag~  134 (290)
T PRK06701        123 GRLDILVNNAAF  134 (290)
T ss_pred             CCCCEEEECCcc
Confidence            368999998874

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.25  E-value=0.3  Score=44.14  Aligned_cols=79  Identities=20%  Similarity=0.349  Sum_probs=48.7

Q ss_pred             CCCEEEEEcC---CHHHHHHHHHHHHcCCCeEEEEcCC---hhhHHHH-HHcCCCEE--EcCCCCCccHHHHHHHHcC--
Q 018072          195 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRS---SKRFEEA-KKFGVTDF--VNTSEHDRPIQEVIAEMTN--  263 (361)
Q Consensus       195 ~g~~VlI~G~---g~vG~~a~~~a~~~g~~~Vi~~~~~---~~~~~~~-~~~G~~~v--v~~~~~~~~~~~~i~~~~~--  263 (361)
                      .+.++||+|+   +++|.+.++.+...|+ +|+.+++.   +++++.+ ++++....  .|..+.+ ++.+.+.....  
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~-~v~~~~~~~~~~~   82 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDE-QIDALFASLGQHW   82 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHCCC-eEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHH-HHHHHHHHHHHHh
Confidence            4688999984   5899999888888898 78776433   3444433 33453322  2332222 24444444332  


Q ss_pred             CCccEEEEccCC
Q 018072          264 GGVDRSVECTGN  275 (361)
Q Consensus       264 ~g~Dvvid~~g~  275 (361)
                      +.+|++++++|.
T Consensus        83 g~iD~lvnnAG~   94 (260)
T PRK06997         83 DGLDGLVHSIGF   94 (260)
T ss_pred             CCCcEEEEcccc
Confidence            379999998864

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=94.24  E-value=0.49  Score=45.73  Aligned_cols=34  Identities=24%  Similarity=0.232  Sum_probs=30.2

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  229 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~  229 (361)
                      ..+|+|+|+|++|..++..+.+.|..+++.+|.+
T Consensus        42 ~~~VlviG~GGlGs~va~~La~~Gvg~i~lvD~D   75 (392)
T PRK07878         42 NARVLVIGAGGLGSPTLLYLAAAGVGTLGIVEFD   75 (392)
T ss_pred             cCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCC
Confidence            4589999999999999999999999899888755

>PRK06141 ornithine cyclodeaminase; Validated

Probab=94.24  E-value=0.83  Score=42.72  Aligned_cols=104  Identities=14%  Similarity=0.111  Sum_probs=63.3

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHH-HcCCCeEEEEcCChhhHHHHHH-c---CCCEEEcCCCCCccHHHHHHHHcCCCccE
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGAR-IAGASRIIGVDRSSKRFEEAKK-F---GVTDFVNTSEHDRPIQEVIAEMTNGGVDR  268 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~-~~g~~~Vi~~~~~~~~~~~~~~-~---G~~~vv~~~~~~~~~~~~i~~~~~~g~Dv  268 (361)
                      +...+|+|+|+|..|...+..+. ..+..+|.++++++++.+.+.+ +   |.. +....+    ..+.+     .+.|+
T Consensus       123 ~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~-~~~~~~----~~~av-----~~aDI  192 (314)
T PRK06141        123 KDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFD-AEVVTD----LEAAV-----RQADI  192 (314)
T ss_pred             CCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCc-eEEeCC----HHHHH-----hcCCE
Confidence            55688999999999999886444 4676799999999888665543 3   322 111111    22222     25899


Q ss_pred             EEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChh
Q 018072          269 SVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI  310 (361)
Q Consensus       269 vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~  310 (361)
                      |+.+++++..+- -.+.++++ -.+..+|... ...-.+...
T Consensus       193 Vi~aT~s~~pvl-~~~~l~~g-~~i~~ig~~~-~~~~El~~~  231 (314)
T PRK06141        193 ISCATLSTEPLV-RGEWLKPG-THLDLVGNFT-PDMRECDDE  231 (314)
T ss_pred             EEEeeCCCCCEe-cHHHcCCC-CEEEeeCCCC-cccccCCHH
Confidence            999888753311 12567775 5555566433 333444443

>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating)

Probab=94.22  E-value=0.3  Score=44.92  Aligned_cols=89  Identities=19%  Similarity=0.198  Sum_probs=57.1

Q ss_pred             EEEEEcCCHHHHHH-HHHHHHcCCCeEEEEcCChhh--HHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072          198 SVAVFGLGAVGLAA-AEGARIAGASRIIGVDRSSKR--FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       198 ~VlI~G~g~vG~~a-~~~a~~~g~~~Vi~~~~~~~~--~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      +|.|+|+|.+|... ..+.+..+.+-+-+++.++++  ++.++++|.......      +...+.   +..+|+|+++++
T Consensus         3 rVAIIG~G~IG~~h~~~ll~~~~~elvaV~d~d~es~~la~A~~~Gi~~~~~~------~e~ll~---~~dIDaV~iaTp   73 (285)
T TIGR03215         3 KVAIIGSGNIGTDLMYKLLRSEHLEMVAMVGIDPESDGLARARELGVKTSAEG------VDGLLA---NPDIDIVFDATS   73 (285)
T ss_pred             EEEEEeCcHHHHHHHHHHHhCCCcEEEEEEeCCcccHHHHHHHHCCCCEEECC------HHHHhc---CCCCCEEEECCC
Confidence            68899999999865 455554466334445666654  566778887543311      222221   237999999999


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEc
Q 018072          275 NIDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       275 ~~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      .....+.+...+..  |+.++.-
T Consensus        74 ~~~H~e~a~~al~a--Gk~VIde   94 (285)
T TIGR03215        74 AKAHARHARLLAEL--GKIVIDL   94 (285)
T ss_pred             cHHHHHHHHHHHHc--CCEEEEC
Confidence            97777777766665  6666543

Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.

>PRK07775 short chain dehydrogenase; Provisional

Probab=94.22  E-value=0.36  Score=43.95  Aligned_cols=80  Identities=20%  Similarity=0.200  Sum_probs=49.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-EEcCCCCC-ccHHHHHHHHc--CCC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHD-RPIQEVIAEMT--NGG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-vv~~~~~~-~~~~~~i~~~~--~~g  265 (361)
                      +..+++|+|+ |.+|...++.+...|+ +|+++.++.++.+.+.    ..+... .+..+-.+ ..+.+.+....  -++
T Consensus         9 ~~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   87 (274)
T PRK07775          9 DRRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE   87 (274)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            3458999998 9999999998888898 8888888776554332    234332 22222222 12333333221  136


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++|.++|.
T Consensus        88 id~vi~~Ag~   97 (274)
T PRK07775         88 IEVLVSGAGD   97 (274)
T ss_pred             CCEEEECCCc
Confidence            8999999874

>PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional

Probab=94.21  E-value=0.7  Score=40.48  Aligned_cols=97  Identities=20%  Similarity=0.227  Sum_probs=58.9

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHH-HcCCCccEEE
Q 018072          193 PERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAE-MTNGGVDRSV  270 (361)
Q Consensus       193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~-~~~~g~Dvvi  270 (361)
                      +++|++||=+|+|+ |..+..+++..+. ..|+++|.++..    ...++ .++.-+-.+.+..+.+.. +..+.+|+|+
T Consensus        49 ~~~~~~VLDlG~Gt-G~~t~~l~~~~~~~~~V~aVDi~~~~----~~~~v-~~i~~D~~~~~~~~~i~~~~~~~~~D~V~  122 (209)
T PRK11188         49 FKPGMTVVDLGAAP-GGWSQYAVTQIGDKGRVIACDILPMD----PIVGV-DFLQGDFRDELVLKALLERVGDSKVQVVM  122 (209)
T ss_pred             CCCCCEEEEEcccC-CHHHHHHHHHcCCCceEEEEeccccc----CCCCc-EEEecCCCChHHHHHHHHHhCCCCCCEEe
Confidence            58899888889866 5556566666543 489999998721    11122 233222222222333333 3344899999


Q ss_pred             Ecc-----CC------------hHHHHHHHHHhcCCCcEEEEE
Q 018072          271 ECT-----GN------------IDNMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       271 d~~-----g~------------~~~~~~~~~~l~~~~G~iv~~  296 (361)
                      ...     |.            ...+..+.+.|+++ |+++..
T Consensus       123 S~~~~~~~g~~~~d~~~~~~~~~~~L~~~~~~LkpG-G~~vi~  164 (209)
T PRK11188        123 SDMAPNMSGTPAVDIPRAMYLVELALDMCRDVLAPG-GSFVVK  164 (209)
T ss_pred             cCCCCccCCChHHHHHHHHHHHHHHHHHHHHHcCCC-CEEEEE
Confidence            744     22            13567888899997 998874

>TIGR02415 23BDH acetoin reductases

Probab=94.21  E-value=0.26  Score=44.06  Aligned_cols=76  Identities=21%  Similarity=0.245  Sum_probs=48.6

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCE-EE--cCCCCCccHHHHHHHHcC--CCcc
Q 018072          198 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMTN--GGVD  267 (361)
Q Consensus       198 ~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~-vv--~~~~~~~~~~~~i~~~~~--~g~D  267 (361)
                      +++|+|+ |++|...++.+...|+ +|+.+++++++.+.+    ++.+... .+  |..+. ..+.+.+.....  +.+|
T Consensus         2 ~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~i~~~~~~~~~~~~~id   79 (254)
T TIGR02415         2 VALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDK-DQVFSAIDQAAEKFGGFD   79 (254)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCH-HHHHHHHHHHHHHcCCCC
Confidence            6899987 9999999998888998 899888887655433    2334322 22  22222 123333333322  2689


Q ss_pred             EEEEccCC
Q 018072          268 RSVECTGN  275 (361)
Q Consensus       268 vvid~~g~  275 (361)
                      ++|++.|.
T Consensus        80 ~vi~~ag~   87 (254)
T TIGR02415        80 VMVNNAGV   87 (254)
T ss_pred             EEEECCCc
Confidence            99999874

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=94.20  E-value=0.34  Score=45.26  Aligned_cols=36  Identities=22%  Similarity=0.337  Sum_probs=32.3

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChh
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK  231 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~  231 (361)
                      .|.+|.|+|.|.+|...++.++..|. +|+++++..+
T Consensus       135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~  170 (312)
T PRK15469        135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRK  170 (312)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCC
Confidence            57899999999999999999999999 8999987654

>PRK05708 2-dehydropantoate 2-reductase; Provisional

Probab=94.20  E-value=0.22  Score=46.32  Aligned_cols=96  Identities=17%  Similarity=0.167  Sum_probs=54.4

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc-CCCEEEcCCCCCccHHH-HHHHHcCCCccEEEEccC
Q 018072          197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GVTDFVNTSEHDRPIQE-VIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~-G~~~vv~~~~~~~~~~~-~i~~~~~~g~Dvvid~~g  274 (361)
                      .+|+|+|+|++|.+..-.+...|. .|+.+++.+++++.+++- |.. +..... ...+.. .......+.+|+||-|+=
T Consensus         3 m~I~IiGaGaiG~~~a~~L~~~G~-~V~lv~r~~~~~~~i~~~~Gl~-i~~~g~-~~~~~~~~~~~~~~~~~D~viv~vK   79 (305)
T PRK05708          3 MTWHILGAGSLGSLWACRLARAGL-PVRLILRDRQRLAAYQQAGGLT-LVEQGQ-ASLYAIPAETADAAEPIHRLLLACK   79 (305)
T ss_pred             ceEEEECCCHHHHHHHHHHHhCCC-CeEEEEechHHHHHHhhcCCeE-EeeCCc-ceeeccCCCCcccccccCEEEEECC
Confidence            369999999999877766667787 788888887777777653 432 211111 000000 000001126899999885


Q ss_pred             ChHH---HHHHHHHhcCCCcEEEEE
Q 018072          275 NIDN---MISAFECVHDGWGVAVLV  296 (361)
Q Consensus       275 ~~~~---~~~~~~~l~~~~G~iv~~  296 (361)
                      ..++   ++.....+.++ ..++.+
T Consensus        80 ~~~~~~al~~l~~~l~~~-t~vv~l  103 (305)
T PRK05708         80 AYDAEPAVASLAHRLAPG-AELLLL  103 (305)
T ss_pred             HHhHHHHHHHHHhhCCCC-CEEEEE
Confidence            4332   23333344555 655544

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=94.19  E-value=0.66  Score=44.43  Aligned_cols=81  Identities=28%  Similarity=0.234  Sum_probs=47.7

Q ss_pred             CCCCEEEEEcC-CHHHHH--HHHHHHHcCCCeEEEEcCChh--h--------------HHHHHHcCCCE-EEcCCCCC-c
Q 018072          194 ERGSSVAVFGL-GAVGLA--AAEGARIAGASRIIGVDRSSK--R--------------FEEAKKFGVTD-FVNTSEHD-R  252 (361)
Q Consensus       194 ~~g~~VlI~G~-g~vG~~--a~~~a~~~g~~~Vi~~~~~~~--~--------------~~~~~~~G~~~-vv~~~~~~-~  252 (361)
                      ..|.++||+|+ +++|++  .++.+ ..|+ ++++++...+  +              .+.+++.|... .+.-+-.+ .
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA-~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E  116 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGA-DTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDE  116 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCC-eEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHH
Confidence            44678999987 899999  45555 7898 7777763221  1              23445567542 23322222 1


Q ss_pred             cHHHHHHHHcC--CCccEEEEccCCh
Q 018072          253 PIQEVIAEMTN--GGVDRSVECTGNI  276 (361)
Q Consensus       253 ~~~~~i~~~~~--~g~Dvvid~~g~~  276 (361)
                      ...+.+..+..  +++|+++++.+.+
T Consensus       117 ~v~~lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        117 IKQKVIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHHHhcCCCCEEEECCccC
Confidence            23333333322  3799999998875

>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]

Probab=94.18  E-value=1.7  Score=40.02  Aligned_cols=61  Identities=20%  Similarity=0.173  Sum_probs=46.9

Q ss_pred             hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEc--CChhhHHHHHHcCCCEEEcCC
Q 018072          188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD--RSSKRFEEAKKFGVTDFVNTS  248 (361)
Q Consensus       188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~--~~~~~~~~~~~~G~~~vv~~~  248 (361)
                      .....++||.+|+=--+|..|...+.+|+.+|.+-++++.  -+.+|.++++.+|+..+....
T Consensus        54 e~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~  116 (300)
T COG0031          54 EKRGLLKPGGTIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG  116 (300)
T ss_pred             HHcCCCCCCCEEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence            4556699999554444599999999999999995555553  467899999999998766554

>PRK08300 acetaldehyde dehydrogenase; Validated

Probab=94.17  E-value=0.53  Score=43.55  Aligned_cols=94  Identities=17%  Similarity=0.151  Sum_probs=56.3

Q ss_pred             CEEEEEcCCHHHHHHHH-HHHHcCCCeEEEEcCChh--hHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072          197 SSVAVFGLGAVGLAAAE-GARIAGASRIIGVDRSSK--RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  273 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~-~a~~~g~~~Vi~~~~~~~--~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~  273 (361)
                      -+|.|+|.|.+|...+. +.+..+.+-+.+++.+++  .++.++++|.....    .+  +...+....-..+|+||+++
T Consensus         5 lrVAIIGtG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A~~~Gi~~~~----~~--ie~LL~~~~~~dIDiVf~AT   78 (302)
T PRK08300          5 LKVAIIGSGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARARRLGVATSA----EG--IDGLLAMPEFDDIDIVFDAT   78 (302)
T ss_pred             CeEEEEcCcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHHHcCCCccc----CC--HHHHHhCcCCCCCCEEEECC
Confidence            57999999999987444 444335534445566654  45667788864322    11  33333321013699999999


Q ss_pred             CChHHHHHHHHHhcCCCcEEEEEcC
Q 018072          274 GNIDNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       274 g~~~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      +.....+.+...+..  |+.++.-.
T Consensus        79 ~a~~H~e~a~~a~ea--Gk~VID~s  101 (302)
T PRK08300         79 SAGAHVRHAAKLREA--GIRAIDLT  101 (302)
T ss_pred             CHHHHHHHHHHHHHc--CCeEEECC
Confidence            986565565555554  56555543

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=94.09  E-value=0.25  Score=44.66  Aligned_cols=103  Identities=20%  Similarity=0.238  Sum_probs=60.9

Q ss_pred             CCCEEEEEcC---CHHHHHHHHHHHHcCCCeEEEEcCC------hhhHHHHHHcCCC-EE--EcCCCCCccHHHHHHHHc
Q 018072          195 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRS------SKRFEEAKKFGVT-DF--VNTSEHDRPIQEVIAEMT  262 (361)
Q Consensus       195 ~g~~VlI~G~---g~vG~~a~~~a~~~g~~~Vi~~~~~------~~~~~~~~~~G~~-~v--v~~~~~~~~~~~~i~~~~  262 (361)
                      .|.+++|+|+   +++|.+.++.+...|+ +|+.+.++      ++..+.+.+.+.. ..  .|..+. ..+.+.+....
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~v~~~~~~~~   82 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGA-ELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDD-AQIEETFETIK   82 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCH-HHHHHHHHHHH
Confidence            4678999986   4999999988888999 77766433      2233333332221 22  222222 12333333332


Q ss_pred             C--CCccEEEEccCCh-------HH----------------------HHHHHHHhcCCCcEEEEEcCCC
Q 018072          263 N--GGVDRSVECTGNI-------DN----------------------MISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       263 ~--~g~Dvvid~~g~~-------~~----------------------~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      .  +.+|++++++|..       ..                      ....++.|+.. |+++.++...
T Consensus        83 ~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~-g~Iv~isS~~  150 (258)
T PRK07370         83 QKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEG-GSIVTLTYLG  150 (258)
T ss_pred             HHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhC-CeEEEEeccc
Confidence            2  3799999998732       10                      13456667776 9998887543

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=94.09  E-value=0.47  Score=42.32  Aligned_cols=32  Identities=22%  Similarity=0.373  Sum_probs=28.8

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  229 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~  229 (361)
                      +|||+|+|++|...+..+...|.+++..+|.+
T Consensus         1 kVlvvG~GGlG~eilk~La~~Gvg~i~ivD~D   32 (234)
T cd01484           1 KVLLVGAGGIGCELLKNLALMGFGQIHVIDMD   32 (234)
T ss_pred             CEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            48999999999999999999999899888765

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.06  E-value=0.46  Score=43.92  Aligned_cols=95  Identities=21%  Similarity=0.212  Sum_probs=65.9

Q ss_pred             ccccchhhhhhhhhhhcCC-CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCc
Q 018072          175 ILSCGVSTGLGATLNVAKP-ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR  252 (361)
Q Consensus       175 ~l~~~~~ta~~a~~~~~~~-~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~  252 (361)
                      .+||.....+. +++..++ -.|.+|.|+|. +.+|.-.+.++...|+ +|++..+....                    
T Consensus       138 ~~PcTp~aii~-lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~ga-tVtv~~~~t~~--------------------  195 (301)
T PRK14194        138 LTPCTPSGCLR-LLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHC-SVTVVHSRSTD--------------------  195 (301)
T ss_pred             CCCCcHHHHHH-HHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCC-EEEEECCCCCC--------------------
Confidence            34544333332 3444444 46899999998 5999999999999998 89888554321                    


Q ss_pred             cHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072          253 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       253 ~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                       ..+..     ...|+|+-++|.+..++..+  ++++ ..++.+|...
T Consensus       196 -l~e~~-----~~ADIVIsavg~~~~v~~~~--ik~G-aiVIDvgin~  234 (301)
T PRK14194        196 -AKALC-----RQADIVVAAVGRPRLIDADW--LKPG-AVVIDVGINR  234 (301)
T ss_pred             -HHHHH-----hcCCEEEEecCChhcccHhh--ccCC-cEEEEecccc
Confidence             22222     14799999999987777655  8886 8888998543

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=94.05  E-value=0.38  Score=44.44  Aligned_cols=82  Identities=18%  Similarity=0.259  Sum_probs=53.0

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCcc----HHHHHHHHcCCCccEEEEcc
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRP----IQEVIAEMTNGGVDRSVECT  273 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~----~~~~i~~~~~~g~Dvvid~~  273 (361)
                      +|+|+|+|.+|.+.+..+...|. .|+.+++++++.+.+++.|...  +  +.+..    ........  +.+|+||-++
T Consensus         2 ~I~IiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g~~~--~--~~~~~~~~~~~~~~~~~--~~~d~vila~   74 (304)
T PRK06522          2 KIAILGAGAIGGLFGAALAQAGH-DVTLVARRGAHLDALNENGLRL--E--DGEITVPVLAADDPAEL--GPQDLVILAV   74 (304)
T ss_pred             EEEEECCCHHHHHHHHHHHhCCC-eEEEEECChHHHHHHHHcCCcc--c--CCceeecccCCCChhHc--CCCCEEEEec
Confidence            58999999999988888777887 8999999888888777666532  0  00000    00011111  3689999998


Q ss_pred             CChHHHHHHHHHhc
Q 018072          274 GNIDNMISAFECVH  287 (361)
Q Consensus       274 g~~~~~~~~~~~l~  287 (361)
                      ... ....+++.++
T Consensus        75 k~~-~~~~~~~~l~   87 (304)
T PRK06522         75 KAY-QLPAALPSLA   87 (304)
T ss_pred             ccc-cHHHHHHHHh
Confidence            763 3344444444

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=94.04  E-value=0.42  Score=42.24  Aligned_cols=79  Identities=28%  Similarity=0.336  Sum_probs=46.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChh-hHHH----HHHcCCCE-EE--cCCCCCccHHHHHHHHcC--
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK-RFEE----AKKFGVTD-FV--NTSEHDRPIQEVIAEMTN--  263 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~-~~~~----~~~~G~~~-vv--~~~~~~~~~~~~i~~~~~--  263 (361)
                      .+.++||+|+ |.+|...+..+...|+ +|+++.++.. +.+.    ++..+... .+  |..+. ..+.+.+.....  
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~-~~~~~~~~~~~~~~   81 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDA-ESVERAVDEAKAEF   81 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCH-HHHHHHHHHHHHHc
Confidence            3468999998 9999999999888898 6766655543 2222    22233332 22  22221 123333333322  


Q ss_pred             CCccEEEEccCC
Q 018072          264 GGVDRSVECTGN  275 (361)
Q Consensus       264 ~g~Dvvid~~g~  275 (361)
                      +++|.++.++|.
T Consensus        82 ~~id~vi~~ag~   93 (248)
T PRK05557         82 GGVDILVNNAGI   93 (248)
T ss_pred             CCCCEEEECCCc
Confidence            268999999874

>PRK13243 glyoxylate reductase; Reviewed

Probab=94.03  E-value=0.43  Score=45.03  Aligned_cols=37  Identities=32%  Similarity=0.546  Sum_probs=33.1

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhh
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR  232 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~  232 (361)
                      .|.+|.|+|.|.+|...++.++..|. +|++++++.+.
T Consensus       149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~  185 (333)
T PRK13243        149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKP  185 (333)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCCh
Confidence            57899999999999999999999999 89999887543

>PLN02928 oxidoreductase family protein

Probab=94.02  E-value=0.47  Score=45.03  Aligned_cols=35  Identities=31%  Similarity=0.554  Sum_probs=32.1

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  230 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~  230 (361)
                      .|.++.|+|.|.+|...++.++.+|. +|++++++.
T Consensus       158 ~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~  192 (347)
T PLN02928        158 FGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSW  192 (347)
T ss_pred             CCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCC
Confidence            57899999999999999999999999 999998863

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.01  E-value=0.41  Score=44.48  Aligned_cols=80  Identities=24%  Similarity=0.290  Sum_probs=47.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCh-hhHHH----HHHcCCCEEEcC-CCCC-ccHHHHHHHHc-CCC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS-KRFEE----AKKFGVTDFVNT-SEHD-RPIQEVIAEMT-NGG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~-~~~~~----~~~~G~~~vv~~-~~~~-~~~~~~i~~~~-~~g  265 (361)
                      .|.++||+|+ +++|...++.+...|+ +|+..++.. ++.+.    +++.|....... +-.+ ....+.+.... -+.
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~   89 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGG   89 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence            4678999988 8999999988888898 788887643 33322    233444332221 1122 11222222211 247


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++|+++|.
T Consensus        90 iD~li~nAG~   99 (306)
T PRK07792         90 LDIVVNNAGI   99 (306)
T ss_pred             CCEEEECCCC
Confidence            9999999874

>PF13823 ADH_N_assoc: Alcohol dehydrogenase GroES-associated; PDB: 2DPH_B

Probab=94.01  E-value=0.066  Score=29.00  Aligned_cols=22  Identities=18%  Similarity=0.125  Sum_probs=15.9

Q ss_pred             eeEEEeecCCCCeEEEEeecCCC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPP   33 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~   33 (361)
                      |||+++.++++ ++++++|.|.+
T Consensus         1 MkAv~y~G~~~-v~ve~VpdP~I   22 (23)
T PF13823_consen    1 MKAVVYHGPKD-VRVEEVPDPKI   22 (23)
T ss_dssp             -EEEEEEETTE-EEEEEE----S
T ss_pred             CcceEEeCCCc-eEEEECCCccc
Confidence            89999999998 99999999875

>PRK13255 thiopurine S-methyltransferase; Reviewed

Probab=93.99  E-value=0.81  Score=40.38  Aligned_cols=102  Identities=20%  Similarity=0.135  Sum_probs=60.6

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCCCEEEc-------CCCCCcc-HHHHHHHH
Q 018072          191 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDFVN-------TSEHDRP-IQEVIAEM  261 (361)
Q Consensus       191 ~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~-~~~G~~~vv~-------~~~~~~~-~~~~i~~~  261 (361)
                      ..+.++.+||+.|+|- |.-++-+|. .|. .|+++|.++..++.+ ++.+......       +...+-+ +...+.++
T Consensus        33 ~~~~~~~rvL~~gCG~-G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l  109 (218)
T PRK13255         33 LALPAGSRVLVPLCGK-SLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFAL  109 (218)
T ss_pred             hCCCCCCeEEEeCCCC-hHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCC
Confidence            3456778999999875 666766764 688 899999999988765 3333321100       0000000 00011111


Q ss_pred             c--C-CCccEEEEccC--------ChHHHHHHHHHhcCCCcEEEEE
Q 018072          262 T--N-GGVDRSVECTG--------NIDNMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       262 ~--~-~g~Dvvid~~g--------~~~~~~~~~~~l~~~~G~iv~~  296 (361)
                      .  . +.||.|+|..-        .+..+....++|+++ |++.++
T Consensus       110 ~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pg-G~~~l~  154 (218)
T PRK13255        110 TAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAG-CRGLLV  154 (218)
T ss_pred             CcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCC-CeEEEE
Confidence            1  1 26899998652        123577888899997 875554

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=93.98  E-value=0.3  Score=43.28  Aligned_cols=71  Identities=21%  Similarity=0.274  Sum_probs=49.6

Q ss_pred             EEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChh--hHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 018072          199 VAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK--RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  275 (361)
Q Consensus       199 VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~--~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~  275 (361)
                      |+|+|+ |.+|...++.+...+. +|.++.|+..  +.+.++..|+..+ ..+-.+  . +.+..... |+|.||.+++.
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~-~V~~l~R~~~~~~~~~l~~~g~~vv-~~d~~~--~-~~l~~al~-g~d~v~~~~~~   74 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGF-SVRALVRDPSSDRAQQLQALGAEVV-EADYDD--P-ESLVAALK-GVDAVFSVTPP   74 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTG-CEEEEESSSHHHHHHHHHHTTTEEE-ES-TT---H-HHHHHHHT-TCSEEEEESSC
T ss_pred             CEEECCccHHHHHHHHHHHhCCC-CcEEEEeccchhhhhhhhcccceEe-ecccCC--H-HHHHHHHc-CCceEEeecCc
Confidence            789998 9999999999988887 7888878764  4566677888654 222222  2 23333222 79999999883

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	361
4dl9_A	396	Crystal Structure Of S-nitrosoglutathione Reductase		2e-92
3uko_A	378	Crystal Structure Of S-Nitrosoglutathione Reductase		5e-92
3qj5_A	374	S-Nitrosoglutathione Reductase (Gsnor) In Complex W		7e-72
1mc5_A	374	Ternary Complex Of Human Glutathione-Dependent Form		9e-72
2fzw_A	373	Structure Of The Binary Complex Of The E67l Mutant		1e-71
1teh_A	373	Structure Of Human Liver Chichi Alcohol Dehydrogena		1e-71
1cdo_A	374	Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Co		1e-70
1qv6_A	374	Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG		5e-68
1axg_A	374	Crystal Structure Of The Val203->ala Mutant Of Live		5e-68
6adh_A	374	Structure Of Triclinic Ternary Complex Of Horse Liv		5e-68
1hdx_A	374	Three-Dimensional Structures Of Three Human Alcohol		7e-68
1htb_A	374	Crystallization Of Human Beta3 Alcohol Dehydrogenas		8e-68
3oq6_A	374	Horse Liver Alcohol Dehydrogenase A317c Mutant Comp		9e-68
1n8k_A	374	Horse Liver Alcohol Dehydrogenase Val292thr Mutant		2e-67
1ju9_A	374	Horse Liver Alcohol Dehydrogenase Val292ser Mutant		3e-67
1a71_A	374	Ternary Complex Of An Active Site Double Mutant Of		3e-67
1axe_A	374	Crystal Structure Of The Active-Site Mutant Phe93->		3e-67
1hdy_A	374	Three-Dimensional Structures Of Three Human Alcohol		3e-67
1mgo_A	374	Horse Liver Alcohol Dehydrogenase Phe93ala Mutant L		5e-67
1hdz_A	374	Three-Dimensional Structures Of Three Human Alcohol		5e-67
1qlh_A	374	Horse Liver Alcohol Dehydrogenase Complexed To Nad		2e-66
1ht0_A	374	Human Gamma-2 Alcohol Dehydrogense Length = 374		7e-66
1ee2_B	373	The Structure Of Steroid-Active Alcohol Dehydrogena		8e-66
1ee2_A	373	The Structure Of Steroid-Active Alcohol Dehydrogena		2e-65
1hso_A	374	Human Alpha Alcohol Dehydrogenase (Adh1a) Length =		9e-63
3cos_A	381	Crystal Structure Of Human Class Ii Alcohol Dehydro		1e-62
1d1t_A	373	Mutant Of Human Sigma Alcohol Dehydrogenase With Le		4e-57
1agn_A	373	X-Ray Structure Of Human Sigma Alcohol Dehydrogenas		7e-57
1e3l_A	376	P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase		1e-56
1p0c_A	373	Crystal Structure Of The Nadp(H)-Dependent Vertebra		2e-56
1e3e_A	376	Mouse Class Ii Alcohol Dehydrogenase Complex With N		2e-56
1f8f_A	371	Crystal Structure Of Benzyl Alcohol Dehydrogenase F		7e-20
2h6e_A	344	Crystal Structure Of The D-Arabinose Dehydrogenase		6e-09
3meq_A	365	Crystal Structure Of Alcohol Dehydrogenase From Bru		9e-09
1rjw_A	339	Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd		3e-07
3pii_A	339	Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog		4e-07
1llu_A	342	The Ternary Complex Of Pseudomonas Aeruginosa Alcoh		4e-07
2eer_A	347	Structural Study Of Project Id St2577 From Sulfolob		2e-06
3s1l_A	340	Crystal Structure Of Apo-Form Furx Length = 340		7e-06
4ilk_A	359	Crystal Structure Of Short Chain Alcohol Dehydrogen		4e-05
2hcy_A	347	Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevi		8e-05
1uuf_A	369	Crystal Structure Of A Zinc-Type Alcohol Dehydrogen		9e-05
1r37_A	347	Alcohol Dehydrogenase From Sulfolobus Solfataricus		1e-04
1nto_A	347	N249y Mutant Of Alcohol Dehydrogenase From The Arch		6e-04
3i4c_A	347	Crystal Structure Of Sulfolobus Solfataricus Adh(Ss		6e-04

>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From Tomato (solanum Lycopersicum) In Complex With Nad+ Length = 396

Iteration: 1
 Score =  335 bits (859), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 161/344 (46%), Positives = 213/344 (61%)
Query: 2   SSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT 61
           S+T G ++TCKAAVAWE  KPL+I+DV+VAPPQA EVR+K+ YT+LC TD Y W  K   
Sbjct: 18  SATQGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRVKVLYTALCHTDAYTWSGKDPE 77
Query: 62  PLFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINP 121
            LFP + GH                    HV+P +  EC +C+ C+S  +N+C  +R   
Sbjct: 78  GLFPCVLGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAAT 137
Query: 122 VRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVS 181
             GVM+ D +SRFSING+P+ HF+GTSTFS+YTVVH   VAKI+P+APL+KVC+L CGV 
Sbjct: 138 GVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPVAPLEKVCLLGCGVP 197
Query: 182 TGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGV 241
           TGLGA  N AK E                               +D  SK+F+ AK FGV
Sbjct: 198 TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRIIGIDIDSKKFDRAKNFGV 257
Query: 242 TDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK 301
           T+F+N  EH++PIQ+VI ++T+GGVD S EC GN+  M SA EC H GWG +V+VGV + 
Sbjct: 258 TEFINPKEHEQPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAAS 317
Query: 302 DAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIR 345
                T+P  ++  R  KGT FG +K R+ +PS+VD Y+ K I+
Sbjct: 318 GQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPSLVDKYLKKEIK 361

>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From Arabidopsis Thaliana, Complex With Nadh Length = 378

Iteration: 1
 Score =  334 bits (856), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 163/343 (47%), Positives = 211/343 (61%)
Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           +T G ++TCKAAVA+E  KPL+I+DV+VAPPQA EVRIKI YT+LC TD Y W  K    
Sbjct: 1   ATQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEG 60
Query: 63  LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV 122
           LFP I GH                    HV+P +  EC +C+ C+S  +N+C  +R    
Sbjct: 61  LFPCILGHEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATG 120
Query: 123 RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 182
            G+M+ D +SRFS+NG+P+ HF+GTSTFS+YTVVH   VAKI+P APLDKVC+L CGV T
Sbjct: 121 VGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCGVPT 180
Query: 183 GLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVT 242
           GLGA  N AK E                               +D  SK++E AKKFGV 
Sbjct: 181 GLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVN 240
Query: 243 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 302
           +FVN  +HD+PIQEVI ++T+GGVD S EC GN+  M +A EC H GWG +V+VGV +  
Sbjct: 241 EFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG 300
Query: 303 AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIR 345
               T+P  ++  R  KGT FG +K RT +P +V+ YMNK I+
Sbjct: 301 QEISTRPFQLVTGRVWKGTAFGGFKSRTQVPWLVEKYMNKEIK 343

>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With N6022 Length = 374

Iteration: 1
 Score =  267 bits (682), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 145/342 (42%), Positives = 198/342 (57%), Gaps = 1/342 (0%)
Query: 4   TAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL 63
           +A  ++ CKAAVAWEAGKPL I+++EVAPP+A EVRIKI  T++C TD Y          
Sbjct: 1   SANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGC 60
Query: 64  FPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVR 123
           FP I GH                     V+P++  +CG+C+ C +  +N+C  +R+   +
Sbjct: 61  FPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGK 120
Query: 124 GVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 183
           G+M  DG SRF+  G+ + H++GTSTFSEYTVV    VAKI+PLAPLDKVC+L CG+STG
Sbjct: 121 GLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTG 179
Query: 184 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 243
            GA +N AK E                               VD +  +F  AK+FG T+
Sbjct: 180 YGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATE 239
Query: 244 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 303
            +N  +  +PIQEV+ EMT+GGVD S EC GN+  M +A E  H GWGV+V+VGV +   
Sbjct: 240 CINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGE 299
Query: 304 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIR 345
              T+P  ++  RT KGT FG +K    +P +V  YM+K I+
Sbjct: 300 EIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIK 341

>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With S-(Hydroxymethyl)glutathione And Nadh Length = 374

Iteration: 1
 Score =  267 bits (682), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 145/341 (42%), Positives = 197/341 (57%), Gaps = 1/341 (0%)
Query: 5   AGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF 64
           A  ++ CKAAVAWEAGKPL I+++EVAPP+A EVRIKI  T++C TD Y          F
Sbjct: 2   ANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCF 61
Query: 65  PRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRG 124
           P I GH                     V+P++  +CG+C+ C +  +N+C  +R+   +G
Sbjct: 62  PVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 121
Query: 125 VMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGL 184
           +M  DG SRF+  G+ + H++GTSTFSEYTVV    VAKI+PLAPLDKVC+L CG+STG 
Sbjct: 122 LM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGY 180
Query: 185 GATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDF 244
           GA +N AK E                               VD +  +F  AK+FG T+ 
Sbjct: 181 GAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATEC 240
Query: 245 VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV 304
           +N  +  +PIQEV+ EMT+GGVD S EC GN+  M +A E  H GWGV+V+VGV +    
Sbjct: 241 INPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEE 300
Query: 305 FMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIR 345
             T+P  ++  RT KGT FG +K    +P +V  YM+K I+
Sbjct: 301 IATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIK 341

>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With Nad(H) Length = 373

Iteration: 1
 Score =  266 bits (681), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 145/341 (42%), Positives = 197/341 (57%), Gaps = 1/341 (0%)
Query: 5   AGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF 64
           A  ++ CKAAVAWEAGKPL I+++EVAPP+A EVRIKI  T++C TD Y          F
Sbjct: 1   ANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCF 60
Query: 65  PRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRG 124
           P I GH                     V+P++  +CG+C+ C +  +N+C  +R+   +G
Sbjct: 61  PVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 120
Query: 125 VMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGL 184
           +M  DG SRF+  G+ + H++GTSTFSEYTVV    VAKI+PLAPLDKVC+L CG+STG 
Sbjct: 121 LM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGY 179
Query: 185 GATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDF 244
           GA +N AK E                               VD +  +F  AK+FG T+ 
Sbjct: 180 GAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATEC 239
Query: 245 VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV 304
           +N  +  +PIQEV+ EMT+GGVD S EC GN+  M +A E  H GWGV+V+VGV +    
Sbjct: 240 INPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEE 299
Query: 305 FMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIR 345
             T+P  ++  RT KGT FG +K    +P +V  YM+K I+
Sbjct: 300 IATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIK 340

>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A Glutathione- Dependent Formaldehyde Dehydrogenase) Length = 373

Iteration: 1
 Score =  266 bits (681), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 145/341 (42%), Positives = 197/341 (57%), Gaps = 1/341 (0%)
Query: 5   AGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF 64
           A  ++ CKAAVAWEAGKPL I+++EVAPP+A EVRIKI  T++C TD Y          F
Sbjct: 1   ANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCF 60
Query: 65  PRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRG 124
           P I GH                     V+P++  +CG+C+ C +  +N+C  +R+   +G
Sbjct: 61  PVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 120
Query: 125 VMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGL 184
           +M  DG SRF+  G+ + H++GTSTFSEYTVV    VAKI+PLAPLDKVC+L CG+STG 
Sbjct: 121 LM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGY 179
Query: 185 GATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDF 244
           GA +N AK E                               VD +  +F  AK+FG T+ 
Sbjct: 180 GAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATEC 239
Query: 245 VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV 304
           +N  +  +PIQEV+ EMT+GGVD S EC GN+  M +A E  H GWGV+V+VGV +    
Sbjct: 240 INPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEE 299
Query: 305 FMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIR 345
             T+P  ++  RT KGT FG +K    +P +V  YM+K I+
Sbjct: 300 IATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIK 340

>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed With Nicotinamide Adenine Dinucleotide (Nad), And Zinc Length = 374

Iteration: 1
 Score =  263 bits (672), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 143/344 (41%), Positives = 193/344 (56%), Gaps = 2/344 (0%)
Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           +T G ++ CKAAVAWEA KPL+I+++EV  P A E+RIKI  T +C TDLY         
Sbjct: 1   ATVGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKD 60
Query: 63  LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV 122
            FP + GH                     V+P+F  +CG+CR C+S  +N C     N  
Sbjct: 61  GFPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANES 120
Query: 123 RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 182
             VM +  ++RF+  G  V  FLGTSTFS+YTVV+   VAKI+P APLD VC+L CGVST
Sbjct: 121 PDVM-SPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVST 179
Query: 183 GLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVT 242
           G GA +N AK E                               VD +  +FE+AK FG T
Sbjct: 180 GFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGAT 239
Query: 243 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 302
           DFVN ++H  PI +V+++MTNGGVD S+EC GN+  M +A E    GWGV+VLVG     
Sbjct: 240 DFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLH 299
Query: 303 AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRF 346
            V  T+PI ++  RT KG+ FG +K +  +P +V  Y++K ++ 
Sbjct: 300 DV-ATRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKL 342

>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol Length = 374

Iteration: 1
 Score =  254 bits (649), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 138/340 (40%), Positives = 189/340 (55%), Gaps = 2/340 (0%)
Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           STAG ++ CKAAV WE  KP  I++VEVAPP+A EVRIK+  T +CR+D         TP
Sbjct: 1   STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDQVVSGTLVTP 60
Query: 63  LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV 122
           L P I GH                     V+P+FT +CG CR C+    N C    ++  
Sbjct: 61  L-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 123 RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 182
           RG M  DG SRF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG ST
Sbjct: 120 RGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFST 178
Query: 183 GLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVT 242
           G G+ + VAK  +                              VD +  RF +AK+ G T
Sbjct: 179 GYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDRFAKAKEVGAT 238
Query: 243 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 302
           + VN  ++ +PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+VGVP   
Sbjct: 239 ECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDS 298
Query: 303 AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 342
                 P+ +L+ RT KG  FG +K +  +P +V  +M K
Sbjct: 299 QNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver Alcohol Dehydrogenase Complexed With Cofactor Nad And Inhibitor Trifluoroethanol Solved To 2.5 Angstrom Resolution Length = 374

Iteration: 1
 Score =  254 bits (649), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 137/340 (40%), Positives = 190/340 (55%), Gaps = 2/340 (0%)
Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           STAG ++ CKAAV WE  KP  I++VEVAPP+A EVRIK+  T +CR+D +       TP
Sbjct: 1   STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP 60
Query: 63  LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV 122
           L P I GH                     V+P+FT +CG CR C+    N C    ++  
Sbjct: 61  L-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 123 RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 182
           RG M  DG SRF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG ST
Sbjct: 120 RGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFST 178
Query: 183 GLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVT 242
           G G+ + VAK  +                              VD +  +F +AK+ G T
Sbjct: 179 GYGSAVKVAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT 238
Query: 243 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 302
           + VN  ++ +PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+VGVP   
Sbjct: 239 ECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDS 298
Query: 303 AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 342
                 P+ +L+ RT KG  FG +K +  +P +V  +M K
Sbjct: 299 QNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver Alcohol Dehydrogenase At 2.9 Angstroms Resolution Length = 374

Iteration: 1
 Score =  254 bits (649), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 137/340 (40%), Positives = 190/340 (55%), Gaps = 2/340 (0%)
Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           STAG ++ CKAAV WE  KP  I++VEVAPP+A EVRIK+  T +CR+D +       TP
Sbjct: 1   STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP 60
Query: 63  LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV 122
           L P I GH                     V+P+FT +CG CR C+    N C    ++  
Sbjct: 61  L-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 123 RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 182
           RG M  DG SRF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG ST
Sbjct: 120 RGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFST 178
Query: 183 GLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVT 242
           G G+ + VAK  +                              VD +  +F +AK+ G T
Sbjct: 179 GYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT 238
Query: 243 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 302
           + VN  ++ +PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+VGVP   
Sbjct: 239 ECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDS 298
Query: 303 AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 342
                 P+ +L+ RT KG  FG +K +  +P +V  +M K
Sbjct: 299 QNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  254 bits (648), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 138/345 (40%), Positives = 190/345 (55%), Gaps = 4/345 (1%)
Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           STAG ++ CKAAV WE  KP  I+DVEVAPP+A EVRIK+    +CRTD +       TP
Sbjct: 1   STAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVTP 60
Query: 63  LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV 122
           L P I GH                     V+P+FT +CG CR C++  SN C    +   
Sbjct: 61  L-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNP 119
Query: 123 RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 182
           RG  L DG  RF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG ST
Sbjct: 120 RGT-LQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFST 178
Query: 183 GLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVT 242
           G G+ +NVAK                                 VD +  +F +AK+ G T
Sbjct: 179 GYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGAT 238
Query: 243 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 302
           + +N  ++ +PIQEV+ EMT+GGVD S E  G +D M+++  C H+  G +V+VGVP   
Sbjct: 239 ECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPAS 298
Query: 303 AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRFS 347
                 P+ +L  RT KG  +G +K +  +P +V  +M K  +FS
Sbjct: 299 QNLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAK--KFS 341

>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10 MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+ And 1 Mm 4-Iodopyrazole At 25 C Length = 374

Iteration: 1
 Score =  254 bits (648), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 138/345 (40%), Positives = 190/345 (55%), Gaps = 4/345 (1%)
Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           STAG ++ CKAAV WE  KP  I+DVEVAPP+A EVRIK+    +CRTD +       TP
Sbjct: 1   STAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTDDHVVSGNLVTP 60
Query: 63  LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV 122
           L P I GH                     V+P+FT +CG CR C++  SN C    +   
Sbjct: 61  L-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNP 119
Query: 123 RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 182
           RG  L DG  RF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG ST
Sbjct: 120 RGT-LQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFST 178
Query: 183 GLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVT 242
           G G+ +NVAK                                 VD +  +F +AK+ G T
Sbjct: 179 GYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGAT 238
Query: 243 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 302
           + +N  ++ +PIQEV+ EMT+GGVD S E  G +D M+++  C H+  G +V+VGVP   
Sbjct: 239 ECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPAS 298
Query: 303 AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRFS 347
                 P+ +L  RT KG  +G +K +  +P +V  +M K  +FS
Sbjct: 299 QNLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAK--KFS 341

>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol Length = 374

Iteration: 1
 Score =  253 bits (647), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 137/340 (40%), Positives = 190/340 (55%), Gaps = 2/340 (0%)
Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           STAG ++ CKAAV WE  KP  I++VEVAPP+A EVRIK+  T +CR+D +       TP
Sbjct: 1   STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP 60
Query: 63  LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV 122
           L P I GH                     V+P+FT +CG CR C+    N C    ++  
Sbjct: 61  L-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 123 RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 182
           RG M  DG SRF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG ST
Sbjct: 120 RGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFST 178
Query: 183 GLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVT 242
           G G+ + VAK  +                              VD +  +F +AK+ G T
Sbjct: 179 GYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT 238
Query: 243 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 302
           + VN  ++ +PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+VGVP   
Sbjct: 239 ECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDS 298
Query: 303 AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 342
                 P+ +L+ RT KG  FG +K +  +P +V  +M K
Sbjct: 299 QNLSMNPMLLLSGRTWKGCIFGGFKSKDSVPKLVADFMAK 338

>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant Complexed To Nad+ And Pyrazole Length = 374

Iteration: 1
 Score =  252 bits (644), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 136/340 (40%), Positives = 189/340 (55%), Gaps = 2/340 (0%)
Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           STAG ++ CKAAV WE  KP  I++VEVAPP+A EVRIK+  T +CR+D +       TP
Sbjct: 1   STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP 60
Query: 63  LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV 122
           L P I GH                     V+P+FT +CG CR C+    N C    ++  
Sbjct: 61  L-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 123 RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 182
           RG M  DG SRF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG ST
Sbjct: 120 RGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFST 178
Query: 183 GLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVT 242
           G G+ + VAK  +                              VD +  +F +AK+ G T
Sbjct: 179 GYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT 238
Query: 243 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 302
           + VN  ++ +PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+ GVP   
Sbjct: 239 ECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVITGVPPDS 298
Query: 303 AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 342
                 P+ +L+ RT KG  FG +K +  +P +V  +M K
Sbjct: 299 QNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant Length = 374

Iteration: 1
 Score =  252 bits (643), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 136/340 (40%), Positives = 189/340 (55%), Gaps = 2/340 (0%)
Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           STAG ++ CKAAV WE  KP  I++VEVAPP+A EVRIK+  T +CR+D +       TP
Sbjct: 1   STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP 60
Query: 63  LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV 122
           L P I GH                     V+P+FT +CG CR C+    N C    ++  
Sbjct: 61  L-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 123 RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 182
           RG M  DG SRF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG ST
Sbjct: 120 RGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFST 178
Query: 183 GLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVT 242
           G G+ + VAK  +                              VD +  +F +AK+ G T
Sbjct: 179 GYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT 238
Query: 243 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 302
           + VN  ++ +PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+ GVP   
Sbjct: 239 ECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVISGVPPDS 298
Query: 303 AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 342
                 P+ +L+ RT KG  FG +K +  +P +V  +M K
Sbjct: 299 QNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With Nad And Trifluoroethanol Length = 374

Iteration: 1
 Score =  252 bits (643), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 136/340 (40%), Positives = 190/340 (55%), Gaps = 2/340 (0%)
Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           STAG ++ CKAAV WE  KP  I++VEVAPP+A EVRIK+  T +CR+D +       TP
Sbjct: 1   STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP 60
Query: 63  LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV 122
           L P I GH                     V+P++T +CG CR C+    N C    ++  
Sbjct: 61  L-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 123 RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 182
           RG M  DG SRF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG ST
Sbjct: 120 RGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFST 178
Query: 183 GLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVT 242
           G G+ + VAK  +                              VD +  +F +AK+ G T
Sbjct: 179 GYGSAVKVAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT 238
Query: 243 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 302
           + VN  ++ +PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+VGVP   
Sbjct: 239 ECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDS 298
Query: 303 AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 342
                 P+ +L+ RT KG  FG +K +  +P +V  +M K
Sbjct: 299 QNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of Horse Liver Alcohol Dehydrogenase In Complex With Nad And Inhibitor Trifluoroethanol Length = 374

Iteration: 1
 Score =  252 bits (643), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 136/340 (40%), Positives = 190/340 (55%), Gaps = 2/340 (0%)
Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           STAG ++ CKAAV WE  KP  I++VEVAPP+A EVRIK+  T +CR+D +       TP
Sbjct: 1   STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP 60
Query: 63  LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV 122
           L P I GH                     V+P++T +CG CR C+    N C    ++  
Sbjct: 61  L-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 123 RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 182
           RG M  DG SRF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG ST
Sbjct: 120 RGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFST 178
Query: 183 GLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVT 242
           G G+ + VAK  +                              VD +  +F +AK+ G T
Sbjct: 179 GYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT 238
Query: 243 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 302
           + VN  ++ +PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+VGVP   
Sbjct: 239 ECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDS 298
Query: 303 AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 342
                 P+ +L+ RT KG  FG +K +  +P +V  +M K
Sbjct: 299 QNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  251 bits (642), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 137/345 (39%), Positives = 189/345 (54%), Gaps = 4/345 (1%)
Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           STAG ++ CKAAV WE  KP  I+DVEVAPP+A EVRIK+    +C TD +       TP
Sbjct: 1   STAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICHTDDHVVSGNLVTP 60
Query: 63  LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV 122
           L P I GH                     V+P+FT +CG CR C++  SN C    +   
Sbjct: 61  L-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNP 119
Query: 123 RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 182
           RG  L DG  RF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG ST
Sbjct: 120 RGT-LQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFST 178
Query: 183 GLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVT 242
           G G+ +NVAK                                 VD +  +F +AK+ G T
Sbjct: 179 GYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGAT 238
Query: 243 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 302
           + +N  ++ +PIQEV+ EMT+GGVD S E  G +D M+++  C H+  G +V+VGVP   
Sbjct: 239 ECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPAS 298
Query: 303 AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRFS 347
                 P+ +L  RT KG  +G +K +  +P +V  +M K  +FS
Sbjct: 299 QNLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAK--KFS 341

>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant Length = 374

Iteration: 1
 Score =  251 bits (641), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 136/340 (40%), Positives = 189/340 (55%), Gaps = 2/340 (0%)
Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           STAG ++ CKAAV WE  KP  I++VEVAPP+A EVRIK+  T +CR+D +       TP
Sbjct: 1   STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP 60
Query: 63  LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV 122
           L P I GH                     V+P+ T +CG CR C+    N C    ++  
Sbjct: 61  L-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLATPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 123 RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 182
           RG M  DG SRF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG ST
Sbjct: 120 RGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFST 178
Query: 183 GLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVT 242
           G G+ + VAK  +                              VD +  +F +AK+ G T
Sbjct: 179 GYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT 238
Query: 243 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 302
           + VN  ++ +PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+VGVP   
Sbjct: 239 ECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDS 298
Query: 303 AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 342
                 P+ +L+ RT KG  FG +K +  +P +V  +M K
Sbjct: 299 QNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score =  251 bits (641), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 137/345 (39%), Positives = 189/345 (54%), Gaps = 4/345 (1%)
Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           STAG ++ CKAAV WE  KP  I+DVEVAPP+A EVRIK+    +C TD +       TP
Sbjct: 1   STAGKVIKCKAAVLWEVKKPFSIEDVEVAPPKAYEVRIKMVAVGICGTDDHVVSGNLVTP 60
Query: 63  LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV 122
           L P I GH                     V+P+FT +CG CR C++  SN C    +   
Sbjct: 61  L-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRVCKNPESNYCLKNDLGNP 119
Query: 123 RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 182
           RG  L DG  RF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG ST
Sbjct: 120 RGT-LQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFST 178
Query: 183 GLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVT 242
           G G+ +NVAK                                 VD +  +F +AK+ G T
Sbjct: 179 GYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGAT 238
Query: 243 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 302
           + +N  ++ +PIQEV+ EMT+GGVD S E  G +D M+++  C H+  G +V+VGVP   
Sbjct: 239 ECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPAS 298
Query: 303 AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRFS 347
                 P+ +L  RT KG  +G +K +  +P +V  +M K  +FS
Sbjct: 299 QNLSINPMLLLTGRTWKGAVYGGFKSKEGIPKLVADFMAK--KFS 341

>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double Mutant Of Gly 293 Ala And Pro 295 Thr Length = 374

Iteration: 1
 Score =  249 bits (635), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 135/340 (39%), Positives = 188/340 (55%), Gaps = 2/340 (0%)
Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           STAG ++ CKAAV WE  KP  I++VEVAPP+A EVRIK+  T +CR+D +       TP
Sbjct: 1   STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP 60
Query: 63  LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV 122
           L P I GH                     V+P+FT +CG CR C+    N C    ++  
Sbjct: 61  L-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 123 RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 182
           RG M  DG SRF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG ST
Sbjct: 120 RGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFST 178
Query: 183 GLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVT 242
           G G+ + VAK  +                              VD +  +F +AK+ G T
Sbjct: 179 GYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT 238
Query: 243 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 302
           + VN  ++ +PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+V V    
Sbjct: 239 ECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVAVTPDS 298
Query: 303 AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 342
                 P+ +L+ RT KG  FG +K +  +P +V  +M K
Sbjct: 299 QNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 338

>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense Length = 374

Iteration: 1
 Score =  247 bits (631), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 134/345 (38%), Positives = 189/345 (54%), Gaps = 4/345 (1%)
Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           STAG ++ CKAAV WE  KP  I++VEVAPP+A EVRIK+    +CR+D +       TP
Sbjct: 1   STAGKVIKCKAAVLWELKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDEHVVSGNLVTP 60
Query: 63  LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV 122
           L P I GH                     V+P+FT +CG CR C++  SN C    +   
Sbjct: 61  L-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRICKNPESNYCLKNDLGNP 119
Query: 123 RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 182
           RG  L DG  RF+ +G+P++HF+G STFS+YTVV    VAKI+  +PL+KVC++ CG ST
Sbjct: 120 RGT-LQDGTRRFTCSGKPIHHFVGVSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFST 178
Query: 183 GLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVT 242
           G G+ + VAK                                 VD +  +F +AK+ G T
Sbjct: 179 GYGSAVKVAKVTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGAT 238
Query: 243 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 302
           + +N  ++ +PIQEV+ EMT+GGVD S E  G +D M+++  C H+  G +V+VGVP   
Sbjct: 239 ECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGQLDTMMASLLCCHEACGTSVIVGVPPDS 298
Query: 303 AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRFS 347
                 P+ +L  RT KG  FG +K +  +P +V  +M K  +FS
Sbjct: 299 QNLSINPMLLLTGRTWKGAIFGGFKSKESVPKLVADFMAK--KFS 341

>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score =  247 bits (630), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 134/340 (39%), Positives = 188/340 (55%), Gaps = 3/340 (0%)
Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           STAG ++ CKAAV WE  KP  I++VEVAPP+A EVRIK+    +CR+D +        P
Sbjct: 1   STAGKVIKCKAAVLWEQKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVSGTLVAP 60
Query: 63  LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV 122
           L P I GH                     V+P+F  +CG C  C+    N+C L  ++  
Sbjct: 61  L-PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLC-LKNLSMP 118
Query: 123 RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 182
           RG M  DG SRF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG ST
Sbjct: 119 RGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFST 177
Query: 183 GLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVT 242
           G G+ + VAK  +                              VD +  +F +AK+ G T
Sbjct: 178 GYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT 237
Query: 243 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 302
           + VN  ++ +PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+VGVP   
Sbjct: 238 ECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDS 297
Query: 303 AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 342
                 P+ +L+ RT KG  FG +K +  +P +V  +M K
Sbjct: 298 QNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 337

>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score =  245 bits (626), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 133/339 (39%), Positives = 187/339 (55%), Gaps = 3/339 (0%)
Query: 4   TAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL 63
           TAG ++ CKAAV WE  KP  I++VEVAPP+A EVRIK+    +CR+D +        PL
Sbjct: 2   TAGKVIKCKAAVLWEQKKPFSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVSGTLVAPL 61
Query: 64  FPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVR 123
            P I GH                     V+P+F  +CG C  C+    N+C L  ++  R
Sbjct: 62  -PVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLC-LKNLSMPR 119
Query: 124 GVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 183
           G M  DG SRF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG STG
Sbjct: 120 GTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTG 178
Query: 184 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 243
            G+ + VAK  +                              VD +  +F +AK+ G T+
Sbjct: 179 YGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE 238
Query: 244 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 303
            VN  ++ +PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+VGVP    
Sbjct: 239 CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQ 298
Query: 304 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 342
                P+ +L+ RT KG  FG +K +  +P +V  +M K
Sbjct: 299 NLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 337

>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a) Length = 374

Iteration: 1
 Score =  237 bits (604), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 132/345 (38%), Positives = 186/345 (53%), Gaps = 4/345 (1%)
Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           STAG ++ CKAAV WE  KP  I++VEVAPP+A EVRIK+    +C TD +       TP
Sbjct: 1   STAGKVIKCKAAVLWELKKPFSIEEVEVAPPKAHEVRIKMVAVGICGTDDHVVSGTMVTP 60
Query: 63  LFPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV 122
           L P I GH                     V+P+   +CG CR C++  SN C    ++  
Sbjct: 61  L-PVILGHEAAGIVESVGEGVTTVKPGDKVIPLAIPQCGKCRICKNPESNYCLKNDVSNP 119
Query: 123 RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 182
           +G  L DG SRF+   +P++HFLG STFS+YTVV    VAKI+  +PL+KVC++ CG ST
Sbjct: 120 QGT-LQDGTSRFTCRRKPIHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFST 178
Query: 183 GLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVT 242
           G G+ +NVAK                                 VD +  +F +AK+ G T
Sbjct: 179 GYGSAVNVAKVTPGSTCAVFGLGGVGLSAIMGCKAAGAARIIAVDINKDKFAKAKELGAT 238
Query: 243 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 302
           + +N  ++ +PIQEV+ EMT+GGVD S E  G +D M+++  C H+  G +V+VGVP   
Sbjct: 239 ECINPQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDS 298
Query: 303 AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRFS 347
                 P+ +L  RT KG   G +K +  +P +V  +M K  +FS
Sbjct: 299 QNLSMNPMLLLTGRTWKGAILGGFKSKECVPKLVADFMAK--KFS 341

>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase (Adh4) In Complex With Nad And Zn Length = 381

Iteration: 1
 Score =  236 bits (603), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 131/342 (38%), Positives = 182/342 (53%), Gaps = 3/342 (0%)
Query: 4   TAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL 63
           T G ++ CKAA+AWEAGKPL I++VEVAPP+A EVRI+I  TSLC TD    +SK +   
Sbjct: 4   TKGKVIKCKAAIAWEAGKPLCIEEVEVAPPKAHEVRIQIIATSLCHTDATVIDSKFEGLA 63
Query: 64  FPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDL---LRIN 120
           FP I GH                     V+P++   C  C+ C S ++N+C     L+  
Sbjct: 64  FPVIVGHEAAGIVESIGPGVTNVKPGDKVIPLYAPLCRKCKFCLSPLTNLCGKISNLKSP 123
Query: 121 PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 180
                ++ D  SRF+  G+PV HF GTSTFS+YTVV    +AKI+  A L++VC+L CG 
Sbjct: 124 ASDQQLMEDKTSRFTCKGKPVYHFFGTSTFSQYTVVSDINLAKIDDDANLERVCLLGCGF 183
Query: 181 STGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFG 240
           STG GA +N AK                                 +D +S++F +AK  G
Sbjct: 184 STGYGAAINNAKVTPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINSEKFVKAKALG 243
Query: 241 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 300
            TD +N  +  +PIQEVI E+T GGVD +++C G  + M +A +C   GWG    +GV +
Sbjct: 244 ATDCLNPRDLHKPIQEVIIELTKGGVDFALDCAGGSETMKAALDCTTAGWGSCTFIGVAA 303
Query: 301 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 342
                   P  ++  RT+ GTFFG +K    +P +V  Y NK
Sbjct: 304 GSKGLTVFPEELIIGRTINGTFFGGWKSVDSIPKLVTDYKNK 345

>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine At Position 141 Length = 373

Iteration: 1
 Score =  218 bits (555), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 123/339 (36%), Positives = 175/339 (51%), Gaps = 3/339 (0%)
Query: 4   TAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL 63
           TAG ++ CKAAV WE  +P  I+++EVAPP+  EVRIKI  T +CRTD +  +       
Sbjct: 2   TAGKVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKGT-MVSK 60
Query: 64  FPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVR 123
           FP I GH                     V+P+F  +C +C  CR+   N+C    I   R
Sbjct: 61  FPVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITG-R 119
Query: 124 GVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 183
           GV LADG +RF+  G+PV+HFL TSTF+EYTVV    VAKI+  AP +KVC++ CG STG
Sbjct: 120 GV-LADGTTRFTCKGKPVHHFLNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTG 178
Query: 184 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 243
            GA +   K +                               +D +  +FE+A   G T+
Sbjct: 179 YGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATE 238
Query: 244 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 303
            ++  +  +PI EV++EMT   V  + E  G+++ MI A    H  +G +V+VGVP    
Sbjct: 239 CISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAK 298
Query: 304 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 342
           +    P+ +   RT KG  FG  K R D+P +V  ++ K
Sbjct: 299 MLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAK 337

>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase Length = 373

Iteration: 1
 Score =  217 bits (553), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 122/339 (35%), Positives = 175/339 (51%), Gaps = 3/339 (0%)
Query: 4   TAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL 63
           TAG ++ CKAAV WE  +P  I+++EVAPP+  EVRIKI  T +CRTD +  +       
Sbjct: 2   TAGKVIKCKAAVLWEQKQPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKGT-MVSK 60
Query: 64  FPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVR 123
           FP I GH                     V+P+F  +C +C  CR+   N+C    I   R
Sbjct: 61  FPVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRECNACRNPDGNLCIRSDITG-R 119
Query: 124 GVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 183
           GV LADG +RF+  G+PV+HF+ TSTF+EYTVV    VAKI+  AP +KVC++ CG STG
Sbjct: 120 GV-LADGTTRFTCKGKPVHHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTG 178
Query: 184 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 243
            GA +   K +                               +D +  +FE+A   G T+
Sbjct: 179 YGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATE 238
Query: 244 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 303
            ++  +  +PI EV++EMT   V  + E  G+++ MI A    H  +G +V+VGVP    
Sbjct: 239 CISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAK 298
Query: 304 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 342
           +    P+ +   RT KG  FG  K R D+P +V  ++ K
Sbjct: 299 MLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAK 337

>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score =  216 bits (551), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 117/343 (34%), Positives = 183/343 (53%), Gaps = 8/343 (2%)
Query: 4   TAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL 63
           T G ++ CKAA+AW+ G PL I+++EV+PP+A EVRI++  T +C TD+   + K +  L
Sbjct: 2   TQGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCHTDINATDPK-KKAL 60
Query: 64  FPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLR---IN 120
           FP + GH                     V+P F  +C  C+ C S ++N+C  LR     
Sbjct: 61  FPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYP 120
Query: 121 PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 180
            +   ++ D  SRF+  G  + HF+G S+FS+YTVV    +A+++  A L++VC++ CG 
Sbjct: 121 TIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGF 180
Query: 181 STGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFG 240
           S+G GA +N AK                                 +D + ++F +AK  G
Sbjct: 181 SSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALG 240
Query: 241 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 300
            TD +N  E D+P+Q+VI E+T GGVD S++C G    + +A +C   GWG   +VG   
Sbjct: 241 ATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKV 300
Query: 301 KDAVFMTKP-INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 342
            +   MT P ++V+  R++ GTFFG +K    +P++V  Y NK
Sbjct: 301 DE---MTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNK 340

>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate Alcohol Dehydrogenase (Adh8) Length = 373

Iteration: 1
 Score =  216 bits (549), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 129/341 (37%), Positives = 184/341 (53%), Gaps = 4/341 (1%)
Query: 4   TAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL 63
           TAG  +TCKAAVAWE  KPL ++ + VAPP+A EVRIKI  + +C +D    +    +  
Sbjct: 3   TAGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPSK- 61
Query: 64  FPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVR 123
           FP I GH                     V+P+F  +CG CR C+S  SN C+   +    
Sbjct: 62  FPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKT 121
Query: 124 GVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 183
           G+M AD  SRF+  G+P+ + +GTSTF+EYTVV    VAKI+P APL+  C++ CG +TG
Sbjct: 122 GLM-ADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLES-CLIGCGFATG 179
Query: 184 LGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTD 243
            GA +N AK                                 V     +F +A + G T+
Sbjct: 180 YGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATE 239
Query: 244 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA 303
            +N  ++D+PI EVI E TNGGVD +VEC G I+ M++A +  + G GV V++G+ S + 
Sbjct: 240 CLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNE 299
Query: 304 VFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVI 344
                P+ +L  R+LKG+ FG +K   ++  +VD YM K I
Sbjct: 300 RLPLDPLLLLTGRSLKGSVFGGFKGE-EVSRLVDDYMKKKI 339

>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score =  216 bits (549), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 117/343 (34%), Positives = 183/343 (53%), Gaps = 8/343 (2%)
Query: 4   TAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL 63
           T G ++ CKAA+AW+ G PL I+++EV+PP+A EVRI++  T +C TD+   + K +  L
Sbjct: 2   TQGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK-KKAL 60
Query: 64  FPRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLR---IN 120
           FP + GH                     V+P F  +C  C+ C S ++N+C  LR     
Sbjct: 61  FPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYP 120
Query: 121 PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 180
            +   ++ D  SRF+  G  + HF+G S+FS+YTVV    +A+++  A L++VC++ CG 
Sbjct: 121 TIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGF 180
Query: 181 STGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFG 240
           S+G GA +N AK                                 +D + ++F +AK  G
Sbjct: 181 SSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALG 240
Query: 241 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 300
            TD +N  E D+P+Q+VI E+T GGVD S++C G    + +A +C   GWG   +VG   
Sbjct: 241 ATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKV 300
Query: 301 KDAVFMTKP-INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 342
            +   MT P ++V+  R++ GTFFG +K    +P++V  Y NK
Sbjct: 301 DE---MTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNK 340

>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From Acinetobacter Calcoaceticus Length = 371

Iteration: 1
 Score = 94.7 bits (234), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 85/340 (25%), Positives = 134/340 (39%), Gaps = 15/340 (4%)
Query: 13  AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXX 72
           AAV    G    +Q +++  PQ  EV +K+  T +C TDL   + K   PL P + GH  
Sbjct: 9   AAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVPL-PAVLGHEG 67
Query: 73  XXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS 132
                             HV+  + G CG C  C +     C         G   AD + 
Sbjct: 68  SGIIEAIGPNVTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSG---ADSEG 123
Query: 133 RFSI----NGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL 188
             ++     G   +HF   S+F+ Y +       K+    P++ +  L CG+ TG GA +
Sbjct: 124 NHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPLGCGIQTGAGACI 183
Query: 189 NVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTS 248
           N  K                                 VD    R E AK+ G T  +N+ 
Sbjct: 184 NALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSK 243
Query: 249 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS--KDAVFM 306
             D P+   I E+T+GGV+ ++E TG+ + +    + +     +AV VG P     A F 
Sbjct: 244 TQD-PV-AAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAV-VGAPQLGTTAQFD 300
Query: 307 TKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRF 346
              + +L  +T+ G   G+  P+  +P +V +Y      F
Sbjct: 301 VNDL-LLGGKTILGVVEGSGSPKKFIPELVRLYQQGKFPF 339

>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From Sulfolobus Solfataricus Length = 344

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 78/183 (42%), Gaps = 29/183 (15%)
Query: 8   ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFW---ESKGQTPLF 64
           ++  KAA+  +  +PL I+DV +  PQ  EV I+I    +CRTDL  W   E+K Q    
Sbjct: 1   MVKSKAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAK-QGFRL 59
Query: 65  PRIFGHXXXXXXXXXXXXXXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRG 124
           P I GH                     V+    G+   CR+CR    N+C     N +  
Sbjct: 60  PIILGHENAGTIVEVGELAKVKKGDNVVVYATWGDL-TCRYCREGKFNICK----NQI-- 112
Query: 125 VMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG-CVAKINPLAPLDKVCILSCGVSTG 183
                      I G+  N       FSEY +V S   + K+N L+P++   +   G +T 
Sbjct: 113 -----------IPGQTTN-----GGFSEYMLVKSSRWLVKLNSLSPVEAAPLADAG-TTS 155
Query: 184 LGA 186
           +GA
Sbjct: 156 MGA 158

>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella Mel Length = 365

Iteration: 1
 Score = 57.8 bits (138), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 82/348 (23%), Positives = 123/348 (35%), Gaps = 52/348 (14%)
Query: 10  TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYF----WESKGQTPLFP 65
           T KAAV    GKPL I +V +  P   ++++ I+ + +C TDL+     W  K   P  P
Sbjct: 25  TMKAAVVRAFGKPLTIDEVPIPQPGPGQIQVAIQASGVCHTDLHAAEGDWPVKPNPPFIP 84
Query: 66  RIFGHXXXXXXXXXXXXXXXXXXXXHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRG 124
              GH                     V +P     CG CRHC      +C+  ++N    
Sbjct: 85  ---GHEGVGFVSAVGSGVKHVKEGDRVGIPWLYTACGHCRHCLGGWETLCE-EQLN---- 136
Query: 125 VMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI------NPLAPLDKVCILSC 178
                  + +S+NG           F+EY V     V  +      N +AP     +L  
Sbjct: 137 -------TGYSVNG----------GFAEYVVADPNFVGHLPKNIDFNEIAP-----VLCA 174
Query: 179 GVSTGLGATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKK 238
           GV+   G  +   KP                                VD   ++ + A++
Sbjct: 175 GVTVYKGLKVTDTKP---GDWVVISGIGGLGHMAVQYARAMGLNVAAVDIDDRKLDLARR 231
Query: 239 FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGV 298
            G T  VN      P   +  E T+GG    +    +      A   V  G G   L G+
Sbjct: 232 LGATVTVNAKTVADPAAYIRKE-TDGGAQGVLVTAVSPKAFEQALGMVARG-GTVSLNGL 289
Query: 299 PSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIR 345
           P  D  F     N VLN  T++G+  G    R DL   +D   +  ++
Sbjct: 290 PPGD--FPLSIFNMVLNGVTVRGSIVGT---RLDLQESLDFAADGKVK 332

>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 80/327 (24%), Positives = 121/327 (37%), Gaps = 49/327 (14%)
Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYF----WESKGQTPLFPRI 67
           KAAV  +  +PL I++VE       EV ++IK   +C TDL+     W  K + PL P  
Sbjct: 2   KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIP-- 59
Query: 68  FGHXXXXXXXXXXXXXXXXXXXXHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVM 126
            GH                     V +P     CG C +C S    +C+  +        
Sbjct: 60  -GHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQK-------- 110
Query: 127 LADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI-NPLAPLDKVCILSCGVSTGLG 185
                + +S++G           ++EY    +  V KI + L+  +   I   GV+T   
Sbjct: 111 ----NAGYSVDG----------GYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKA 156
Query: 186 ATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFV 245
             +  AKP                                VD   ++ E AK+ G    V
Sbjct: 157 LKVTGAKPGE---WVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVV 213
Query: 246 NTSEHDRPIQEVIAEMTN---GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 302
           N      P++E  A+      GGV  +V    +     SA+  +  G G  VLVG+P ++
Sbjct: 214 N------PLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRG-GACVLVGLPPEE 266
Query: 303 AVFMTKPI--NVLNERTLKGTFFGNYK 327
              M  PI   VLN   + G+  G  K
Sbjct: 267 ---MPIPIFDTVLNGIKIIGSIVGTRK 290

>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 80/327 (24%), Positives = 121/327 (37%), Gaps = 49/327 (14%)
Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYF----WESKGQTPLFPRI 67
           KAAV  +  +PL I++VE       EV ++IK   +C TDL+     W  K + PL P  
Sbjct: 2   KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIP-- 59
Query: 68  FGHXXXXXXXXXXXXXXXXXXXXHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVM 126
            GH                     V +P     CG C +C S    +C+  +        
Sbjct: 60  -GHEGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQK-------- 110
Query: 127 LADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI-NPLAPLDKVCILSCGVSTGLG 185
                + +S++G           ++EY    +  V KI + L+  +   I   GV+T   
Sbjct: 111 ----NAGYSVDG----------GYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKA 156
Query: 186 ATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFV 245
             +  AKP                                VD   ++ E AK+ G    V
Sbjct: 157 LKVTGAKPGE---WVAIYGIGGFGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGADLVV 213
Query: 246 NTSEHDRPIQEVIAEMTN---GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 302
           N      P++E  A+      GGV  +V    +     SA+  +  G G  VLVG+P ++
Sbjct: 214 N------PLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRG-GACVLVGLPPEE 266
Query: 303 AVFMTKPI--NVLNERTLKGTFFGNYK 327
              M  PI   VLN   + G+  G  K
Sbjct: 267 ---MPIPIFDTVLNGIKIIGSIVGTRK 290

>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol Dehydrogenase With Its Coenzyme And Weak Substrate Length = 342

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 75/342 (21%), Positives = 122/342 (35%), Gaps = 38/342 (11%)
Query: 10  TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIF 68
           T KAAV    G PL I++V+V  P   +V +KI+ + +C TDL+  E      P  P I 
Sbjct: 6   TMKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIP 65
Query: 69  GHXXXXXXXXXXXXXXXXXXXXHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVML 127
           GH                     V +P     CG C HC +    +C+            
Sbjct: 66  GHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCE------------ 113
Query: 128 ADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVC-ILSCGVSTGLGA 186
           +   + +S+NG           ++EY +     V  +       ++  IL  GV+   G 
Sbjct: 114 SQQNTGYSVNG----------GYAEYVLADPNYVGILPKNVEFAEIAPILCAGVTVYKGL 163
Query: 187 TLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVN 246
               A+P +                              +D    + E A+K G +  VN
Sbjct: 164 KQTNARPGQ---WVAISGIGGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGASLTVN 220
Query: 247 TSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFM 306
             + D P++ +  ++  GG    +    +      A      G G   LVG+P  D  F 
Sbjct: 221 ARQED-PVEAIQRDI--GGAHGVLVTAVSNSAFGQAIGMARRG-GTIALVGLPPGD--FP 274
Query: 307 TKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRFS 347
           T   + VL    + G+  G    R DL   +D     +++ +
Sbjct: 275 TPIFDVVLKGLHIAGSIVGT---RADLQEALDFAGEGLVKAT 313

>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus Tokodaii Strain7 Length = 347

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/318 (21%), Positives = 114/318 (35%), Gaps = 37/318 (11%)
Query: 18  EAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQTPL-------FPRIFG 69
           E GKPL ++D+ +  P+  +V IKI+   +C +D++  + + G   +        P   G
Sbjct: 8   EIGKPLKLEDIPIPKPKGSQVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLG 67
Query: 70  HXXXXXXXXXXXXXXXXXXXXHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLA 128
           H                     V +  + GE G+C +CR    ++CD  R          
Sbjct: 68  HEIAGRIEEVGDEVVGYSKGDLVAVNPWEGE-GNCYYCRIGEEHLCDSPR---------- 116
Query: 129 DGQSRFSINGEPVNHFLGTSTFSEYTVV-HSGCVAKINPLAPLDKVCILSCGVSTGLGAT 187
                  IN +          ++EY +V H   + K+  L+ ++   +   GV+T     
Sbjct: 117 ----WLGINYD--------GAYAEYVLVPHYKYLYKLRRLSAVEAAPLTCSGVTTYRAVR 164
Query: 188 LNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNT 247
                P +                              VD   +  E AK+ G    +N 
Sbjct: 165 KASLDPSK-TLVVIGAGGGLGTMAIQIAKAVSGATIIGVDVREEALEAAKRAGADYVINA 223
Query: 248 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMT 307
           S  D P+ E+       G D  ++   N +  +S +  V    G  V+VG+   D  +  
Sbjct: 224 SSQD-PVSEIRRITQGKGADAVIDLN-NSEKTLSIYPYVLAKQGKYVMVGLFGADLKYHA 281
Query: 308 KPINVLNERTLKGTFFGN 325
            P+  LNE    G+  GN
Sbjct: 282 -PLITLNEVQFIGSLVGN 298

>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx Length = 340

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 44/109 (40%), Gaps = 8/109 (7%)
Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYF----WESKGQTPLFPRI 67
           KAAV    G PL I +V V  P   +V++KI+ + +C TDL+     W  K   P  P I
Sbjct: 4   KAAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVK---PTLPFI 60
Query: 68  FGHXXXXXXXXXXXXXXXXXXXXHV-LPVFTGECGDCRHCRSDVSNMCD 115
            GH                     V +P     CG C HC      +C+
Sbjct: 61  PGHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCE 109

>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase (rspb) From E. Coli Cft073 (efi Target Efi-506413) Complexed With Cofactor Nadh Length = 359

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 54/238 (22%), Positives = 78/238 (32%), Gaps = 25/238 (10%)
Query: 23  LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXXXXXXXXXXXX 82
           L I + E+  P A EVR+K+K   +C +D + +        +PR+ GH            
Sbjct: 32  LSIIEREIPTPSAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEG 91
Query: 83  XXXXXXXXHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVN 142
                    V       CG C  C     N+C  L +  V     ADG            
Sbjct: 92  VESARVGERVAVDPVVSCGHCYPCSIGKPNVCTTLAVLGVH----ADG------------ 135
Query: 143 HFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERXXXXXXX 202
                  FSEY VV +    KI P A  D+  ++    +     T +    E        
Sbjct: 136 ------GFSEYAVVPAKNAWKI-PEAVADQYAVMIEPFTIAANVTGHGQPTENDTVLVYG 188
Query: 203 XXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAE 260
                                   DR  +R E+AK+ G    +N S+   P+ E  AE
Sbjct: 189 AGPIGLTIVQVLKGVYNVKNVIVADRIDERLEKAKESGADWAINNSQ--TPLGESFAE 244

>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae Fermentative Enzyme Length = 347

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 10 TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL-FPRIF 68
          T K  + +E+   L  +D+ V  P+A E+ I +KY+ +C TDL+ W      P+  P + 
Sbjct: 5  TQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVG 64
Query: 69 GH 70
          GH
Sbjct: 65 GH 66

>pdb|1UUF|A Chain A, Crystal Structure Of A Zinc-Type Alcohol Dehydrogenase-Like Protein Yahk Length = 369

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 68/177 (38%), Gaps = 17/177 (9%)
Query: 9   LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIF 68
           L  KA  A+ A +PL   D+    P   +V+I+I Y  +C +DL+   S+    ++P + 
Sbjct: 21  LKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVP 80
Query: 69  GHXXXXXXXXXXXXXXXXXXXXHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVML 127
           GH                     V +      C  C  C   + N CD +          
Sbjct: 81  GHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMT--------- 131
Query: 128 ADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI-NPLAPLDKVCILSC-GVST 182
             G        EP  H LG   +S+  VVH   V +I +P   L  V  L C G++T
Sbjct: 132 --GTYNSPTPDEP-GHTLG--GYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITT 183

>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus Complexed With Nad(H) And 2-Ethoxyethanol Length = 347

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 67/318 (21%), Positives = 115/318 (36%), Gaps = 37/318 (11%)
Query: 18  EAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQTPL-------FPRIFG 69
           E GKPL +Q++ V  P+  +V IK++   +C +D++  + + G   +        P   G
Sbjct: 8   EIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLG 67
Query: 70  HXXXXXXXXXXXXXXXXXXXXHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLA 128
           H                     V +  + GE G+C +CR    ++CD  R          
Sbjct: 68  HEIAGKIEEVGDEVVGYSKGDLVAVNPWQGE-GNCYYCRIGEEHLCDSPRW--------- 117
Query: 129 DGQSRFSINGEPVNHFLGTSTFSEYTVV-HSGCVAKINPLAPLDKVCILSCGVSTGLGAT 187
                  IN      F G   ++EY +V H   + K+  L  ++   +   G++T     
Sbjct: 118 -----LGIN------FDG--AYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVR 164
Query: 188 LNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNT 247
                P +                              VD   +  E AK+ G    +N 
Sbjct: 165 KASLDPTK-TLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINA 223
Query: 248 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMT 307
           S  D P+ E+     + GVD  ++   N +  +S +       G  V+VG+   D  +  
Sbjct: 224 SMQD-PLAEIRRITESKGVDAVIDLN-NSEKTLSVYPKALAKQGKYVMVGLFGADLHYHA 281
Query: 308 KPINVLNERTLKGTFFGN 325
            P+  L+E    G+  GN
Sbjct: 282 -PLITLSEIQFVGSLVGN 298

>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus-Monoclinic Crystal Form Length = 347

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 66/318 (20%), Positives = 115/318 (36%), Gaps = 37/318 (11%)
Query: 18  EAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQTPL-------FPRIFG 69
           E GKPL +Q++ V  P+  +V IK++   +C +D++  + + G   +        P   G
Sbjct: 8   EIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLG 67
Query: 70  HXXXXXXXXXXXXXXXXXXXXHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLA 128
           H                     V +  + GE G+C +CR    ++CD  R          
Sbjct: 68  HEIAGKIEEVGDEVVGYSKGDLVAVNPWQGE-GNCYYCRIGEEHLCDSPRW--------- 117
Query: 129 DGQSRFSINGEPVNHFLGTSTFSEYTVV-HSGCVAKINPLAPLDKVCILSCGVSTGLGAT 187
                  IN      F G   ++EY +V H   + K+  L  ++   +   G++T     
Sbjct: 118 -----LGIN------FDG--AYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVR 164
Query: 188 LNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFVNT 247
                P +                              VD   +  E AK+ G    +N 
Sbjct: 165 KASLDPTK-TLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINA 223
Query: 248 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMT 307
           S  D P+ E+     + GVD  ++   + +  +S +       G  V+VG+   D  +  
Sbjct: 224 SMQD-PLAEIRRITESKGVDAVIDLNYS-EKTLSVYPKALAKQGKYVMVGLFGADLHYHA 281
Query: 308 KPINVLNERTLKGTFFGN 325
            P+  L+E    G+  GN
Sbjct: 282 -PLITLSEIQFVGSLVGN 298

>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh) Double Mutant (W95l,N249y) Length = 347

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 66/320 (20%), Positives = 118/320 (36%), Gaps = 41/320 (12%)
Query: 18  EAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHXXXXXXX 77
           E GKPL +Q++ V  P+  +V IK++   +C +D++  + +         FG+       
Sbjct: 8   EIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGR---------FGNLRIVEDL 58
Query: 78  XXXXXXXXXXXXXHVLPVFTGE--CGDCRHCRSDVSNMC--DLLRINPVRGVMLADGQSR 133
                          LPV  G    G       +V      DL+ +NP++G    +G   
Sbjct: 59  GVK------------LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPLQG----EGNCY 102
Query: 134 FSINGEP----VNHFLGTS---TFSEYTVV-HSGCVAKINPLAPLDKVCILSCGVSTGLG 185
           +   GE        +LG +    ++EY +V H   + K+  L  ++   +   G++T   
Sbjct: 103 YCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRA 162
Query: 186 ATLNVAKPERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDRSSKRFEEAKKFGVTDFV 245
                  P +                              VD   +  E AK+ G    +
Sbjct: 163 VRKASLDPTK-TLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVI 221
Query: 246 NTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVF 305
           N S  D P+ E+     + GVD  ++   + +  +S +       G  V+VG+   D  +
Sbjct: 222 NASMQD-PLAEIRRITESKGVDAVIDLNYS-EKTLSVYPKALAKQGKYVMVGLFGADLHY 279
Query: 306 MTKPINVLNERTLKGTFFGN 325
              P+  L+E    G+  GN
Sbjct: 280 HA-PLITLSEIQFVGSLVGN 298

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	361
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	0.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	0.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	0.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	0.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	0.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	1e-167
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	1e-138
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	6e-78
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	4e-67
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	1e-63
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	4e-62
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	7e-62
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	6e-61
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	2e-60
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	3e-58
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	1e-55
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	1e-54
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	4e-54
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	1e-51
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	4e-51
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	8e-51
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	4e-50
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	3e-49
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	7e-49
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	4e-48
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	2e-44
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	1e-42
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	2e-29
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	9e-29
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	2e-28
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	4e-28
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	7e-28
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	1e-26
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	1e-26
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	3e-26
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	1e-25
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	7e-24
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	5e-23
3gms_A	340	Putative NADPH:quinone reductase; structural genom	1e-21
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	2e-21
4eye_A	342	Probable oxidoreductase; structural genomics, niai	2e-16
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	1e-14
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	2e-14
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	2e-14
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	2e-14
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	5e-14
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	8e-14
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	1e-13
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	1e-13
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	2e-13
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	4e-13
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	1e-12
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	2e-12
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	6e-12
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	2e-10
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	5e-10
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	6e-10
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	1e-09
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	3e-09
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	2e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373

 Score =  574 bits (1483), Expect = 0.0
 Identities = 179/340 (52%), Positives = 235/340 (69%), Gaps = 1/340 (0%)

Query: 5   AGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF 64
           A  ++ CKAAVAWEAGKPL I+++EVAPP+A EVRIKI  T++C TD Y          F
Sbjct: 1   ANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCF 60

Query: 65  PRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRG 124
           P I GH  AG+VESVGEGV+ L+ GD V+P++  +CG+C+ C +  +N+C  +R+   +G
Sbjct: 61  PVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 120

Query: 125 VMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGL 184
           +M  DG SRF+  G+ + H++GTSTFSEYTVV    VAKI+PLAPLDKVC+L CG+STG 
Sbjct: 121 LMP-DGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGY 179

Query: 185 GATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF 244
           GA +N AK E GS  AVFGLG VGLA   G ++AGASRIIGVD +  +F  AK+FG T+ 
Sbjct: 180 GAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATEC 239

Query: 245 VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAV 304
           +N  +  +PIQEV+ EMT+GGVD S EC GN+  M +A E  H GWGV+V+VGV +    
Sbjct: 240 INPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEE 299

Query: 305 FMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVI 344
             T+P  ++  RT KGT FG +K    +P +V  YM+K I
Sbjct: 300 IATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKI 339

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376

 Score =  573 bits (1478), Expect = 0.0
 Identities = 147/346 (42%), Positives = 220/346 (63%), Gaps = 6/346 (1%)

Query: 4   TAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL 63
           T G ++ CKAA+AW+ G PL I+++EV+PP+A EVRI++  T +C TD+   + K +  L
Sbjct: 2   TQGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK-KKAL 60

Query: 64  FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR---IN 120
           FP + GHE AG+VESVG GV++ + GD V+P F  +C  C+ C S ++N+C  LR     
Sbjct: 61  FPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYP 120

Query: 121 PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 180
            +   ++ D  SRF+  G  + HF+G S+FS+YTVV    +A+++  A L++VC++ CG 
Sbjct: 121 TIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGF 180

Query: 181 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 240
           S+G GA +N AK   GS+ AVFGLG VGL+A  G +IAGASRII +D + ++F +AK  G
Sbjct: 181 SSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALG 240

Query: 241 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 300
            TD +N  E D+P+Q+VI E+T GGVD S++C G    + +A +C   GWG   +VG   
Sbjct: 241 ATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKV 300

Query: 301 KDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRF 346
            +       ++V+  R++ GTFFG +K    +P++V  Y NK    
Sbjct: 301 DE--MTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDL 344

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374

 Score =  570 bits (1471), Expect = 0.0
 Identities = 168/342 (49%), Positives = 229/342 (66%), Gaps = 2/342 (0%)

Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           STAG ++ CKAAV WE  KP  I++VEVAPP+A EVRIK+  T +CR+D +       TP
Sbjct: 1   STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP 60

Query: 63  LFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV 122
             P I GHEAAG+VES+GEGV+ +  GD V+P+FT +CG CR C+    N C    ++  
Sbjct: 61  -LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMP 119

Query: 123 RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 182
           RG M  DG SRF+  G+P++HFLGTSTFS+YTVV    VAKI+  +PL+KVC++ CG ST
Sbjct: 120 RGTMQ-DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFST 178

Query: 183 GLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 242
           G G+ + VAK  +GS+ AVFGLG VGL+   G + AGA+RIIGVD +  +F +AK+ G T
Sbjct: 179 GYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT 238

Query: 243 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 302
           + VN  ++ +PIQEV+ EM+NGGVD S E  G +D M++A  C  + +GV+V+VGVP   
Sbjct: 239 ECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDS 298

Query: 303 AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVI 344
                 P+ +L+ RT KG  FG +K +  +P +V  +M K  
Sbjct: 299 QNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKF 340

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373

 Score =  569 bits (1468), Expect = 0.0
 Identities = 160/342 (46%), Positives = 222/342 (64%), Gaps = 4/342 (1%)

Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
            TAG  +TCKAAVAWE  KPL ++ + VAPP+A EVRIKI  + +C +D    +    + 
Sbjct: 2   CTAGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPSK 61

Query: 63  LFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV 122
            FP I GHEA GVVES+G GV+ ++ GD V+P+F  +CG CR C+S  SN C+   +   
Sbjct: 62  -FPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAK 120

Query: 123 RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 182
            G+M  D  SRF+  G+P+ + +GTSTF+EYTVV    VAKI+P APL+  C++ CG +T
Sbjct: 121 TGLMA-DMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLES-CLIGCGFAT 178

Query: 183 GLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 242
           G GA +N AK   GS+ AVFGLG VG +A  G + AGASRIIGV     +F +A + G T
Sbjct: 179 GYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGAT 238

Query: 243 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 302
           + +N  ++D+PI EVI E TNGGVD +VEC G I+ M++A +  + G GV V++G+ S +
Sbjct: 239 ECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPN 298

Query: 303 AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVI 344
                 P+ +L  R+LKG+ FG +K   ++  +VD YM K I
Sbjct: 299 ERLPLDPLLLLTGRSLKGSVFGGFKGE-EVSRLVDDYMKKKI 339

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374

 Score =  566 bits (1462), Expect = 0.0
 Identities = 175/342 (51%), Positives = 229/342 (66%), Gaps = 2/342 (0%)

Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           +T G ++ CKAAVAWEA KPL+I+++EV  P A E+RIKI  T +C TDLY         
Sbjct: 1   ATVGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKD 60

Query: 63  LFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV 122
            FP + GHE AG+VESVG GV++ + G+ V+P+F  +CG+CR C+S  +N C     N  
Sbjct: 61  GFPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANES 120

Query: 123 RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 182
             VM    ++RF+  G  V  FLGTSTFS+YTVV+   VAKI+P APLD VC+L CGVST
Sbjct: 121 PDVMS-PKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVST 179

Query: 183 GLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 242
           G GA +N AK E GS+ AVFGLGAVGLAA  G   AGA RII VD +  +FE+AK FG T
Sbjct: 180 GFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGAT 239

Query: 243 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 302
           DFVN ++H  PI +V+++MTNGGVD S+EC GN+  M +A E    GWGV+VLVG     
Sbjct: 240 DFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLH 299

Query: 303 AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVI 344
            V  T+PI ++  RT KG+ FG +K +  +P +V  Y++K +
Sbjct: 300 DV-ATRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKKV 340

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371

 Score =  470 bits (1213), Expect = e-167
 Identities = 102/340 (30%), Positives = 162/340 (47%), Gaps = 9/340 (2%)

Query: 10  TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFG 69
              AAV    G    +Q +++  PQ  EV +K+  T +C TDL   + K   P  P + G
Sbjct: 6   DIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVP-LPAVLG 64

Query: 70  HEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLAD 129
           HE +G++E++G  V++L+VGDHV+  +   CG C  C +     C         G    +
Sbjct: 65  HEGSGIIEAIGPNVTELQVGDHVVLSYG-YCGKCTQCNTGNPAYCSEFFGRNFSGADS-E 122

Query: 130 GQSRFSINGEPV--NHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGAT 187
           G      + + V  +HF   S+F+ Y +       K+    P++ +  L CG+ TG GA 
Sbjct: 123 GNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPLGCGIQTGAGAC 182

Query: 188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 247
           +N  K    SS   +G GAVGL+A   A++ GAS II VD    R E AK+ G T  +N+
Sbjct: 183 INALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINS 242

Query: 248 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMT 307
              D      I E+T+GGV+ ++E TG+ + +    + +    G   +VG P        
Sbjct: 243 KTQD--PVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL-GKIAVVGAPQLGTTAQF 299

Query: 308 KPINVL-NERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRF 346
              ++L   +T+ G   G+  P+  +P +V +Y      F
Sbjct: 300 DVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGKFPF 339

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score =  397 bits (1023), Expect = e-138
 Identities = 78/349 (22%), Positives = 135/349 (38%), Gaps = 29/349 (8%)

Query: 10  TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFG 69
              A V  +  +PL+ ++ E++      + ++I    +C +D++ +  +      P I G
Sbjct: 17  KAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILG 76

Query: 70  HEAAGVVESVGEGVSD-----LEVGDHVLPVFTGECGDCRHCRS-DVSNMCDLLRINPVR 123
           HE AG V  V     D     L+ GD ++      CG+C  C+      +C        +
Sbjct: 77  HEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCP-----NRK 131

Query: 124 GVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG-CVAKINPLAPLDKVCILSCGVST 182
              +  G S +        H  G   +S + V+     V K++    LD + +  C  +T
Sbjct: 132 VYGINRGCSEYP-------HLRGC--YSSHIVLDPETDVLKVSEKDDLDVLAMAMCSGAT 182

Query: 183 GLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 242
              A     +   G +V + G G +GL     AR  GA  +I +  S  R + A++ G  
Sbjct: 183 AYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGAD 242

Query: 243 DFVNTSEHDR-PIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 300
             +N  E      ++ I ++T+G G D  +E TG+   ++   E +  G G   + GV  
Sbjct: 243 LTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-GFYSVAGVAV 301

Query: 301 KDAVFMTKPINVLNERTLKG-TFFGNY-KPRTDLPSVVDMYMNKVIRFS 347
                   P  V     LK  TF G +    +     V +        S
Sbjct: 302 PQDPV---PFKVYEWLVLKNATFKGIWVSDTSHFVKTVSITSRNYQLLS 347

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score =  242 bits (619), Expect = 6e-78
 Identities = 74/340 (21%), Positives = 123/340 (36%), Gaps = 33/340 (9%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE--SKGQTPLFPRIFG 69
           KA    E G   ++ D+    P   E+ +K+    LC +D++  +  +       P   G
Sbjct: 2   KAVQYTEIGSEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLG 61

Query: 70  HEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLAD 129
           HE  G V  +GEGV+   VGD V       CG C  C     N C        R   L  
Sbjct: 62  HEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCT-------RAADLGI 114

Query: 130 GQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP-LAPLDKVCILSCGVSTGLGATL 188
                   G          + +EY +V S         L P+    +   G++     + 
Sbjct: 115 TPPGLGSPG----------SMAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAISR 164

Query: 189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 248
            +     GS+  V G+G +G    +  R   A+R+I VD    R   A++ G    V + 
Sbjct: 165 VLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSG 224

Query: 249 EHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMT 307
                  + I E+T G G     +  G    + +A + V    G   +VG+ +       
Sbjct: 225 AG---AADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVD-GHISVVGIHAGA---HA 277

Query: 308 KPIN--VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIR 345
           K     +    ++   ++G    R++L  VV +     + 
Sbjct: 278 KVGFFMIPFGASVVTPYWGT---RSELMEVVALARAGRLD 314

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score =  214 bits (548), Expect = 4e-67
 Identities = 80/353 (22%), Positives = 145/353 (41%), Gaps = 42/353 (11%)

Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEV-APPQAMEVRIKIKYTSLCRTDLYFWE---SK 58
           S +  +   KAA   E  KPL I+DV+        +V ++I    +C TDL+  +    +
Sbjct: 8   SQSLGVERLKAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHE 67

Query: 59  GQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR 118
              P  P   GHE  G +E V EGV  LE GD V+       G C  CR+     C+ L 
Sbjct: 68  LLQPKLPYTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLE 127

Query: 119 INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN---PLAPLDKVCI 175
                           +I+G           F+E+       V K+        L ++  
Sbjct: 128 F------------PGLNIDG----------GFAEFMRTSHRSVIKLPKDISREKLVEMAP 165

Query: 176 LSCGVSTGLGATLNVAKP--ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRF 233
           L+    T   A +  A      G+ VA+ G+G +G  A +  ++   + +I +D   ++ 
Sbjct: 166 LADAGITAYRA-VKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKL 224

Query: 234 EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGV 292
           + A++ G    V+      P+++V+ E+T G GV+ +++  G+   +      +    G 
Sbjct: 225 KLAERLGADHVVDARRD--PVKQVM-ELTRGRGVNVAMDFVGSQATVDYTPYLLGRM-GR 280

Query: 293 AVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIR 345
            ++VG   +          + +E + +G+  GN     +L  +V + +   +R
Sbjct: 281 LIIVGYGGELRFPT--IRVISSEVSFEGSLVGN---YVELHELVTLALQGKVR 328

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score =  205 bits (524), Expect = 1e-63
 Identities = 89/341 (26%), Positives = 136/341 (39%), Gaps = 54/341 (15%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDL--YFWESKGQTPL-FPRIF 68
            A +  + G    + +V+V  P   EV IK+  TS+C TDL  Y W    Q+ +  P+I 
Sbjct: 6   VAIMKTKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIM 65

Query: 69  GHEAAGVVESVGEGVSDLEVGDHVLPVFTGE----CGDCRHCRSDVSNMCDLLRINPVRG 124
           GHE AG V  +G GV  +EVGD+V    + E    CG C  CR    ++C   +      
Sbjct: 66  GHEVAGEVVEIGPGVEGIEVGDYV----SVETHIVCGKCYACRRGQYHVCQNTK------ 115

Query: 125 VMLADGQSRFSINGEPVNHFLGTST---FSEYTVVHSGCVAKINPLAPLDKVCI---LSC 178
                                G  T   F+EY VV +  + K     P +   +   L  
Sbjct: 116 -------------------IFGVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGN 156

Query: 179 GVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK 238
            V T L   +       G SV + G G +GL     A+ +GA  +I  + S  R E AKK
Sbjct: 157 AVDTVLAGPI------SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKK 210

Query: 239 FGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVG 297
            G    +N  E D  + + + ++T+G GVD  +E +G    +    + V    G   L+G
Sbjct: 211 VGADYVINPFEED--VVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPA-GRVSLLG 267

Query: 298 VPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDM 338
           +           + +    T+ G             +V  +
Sbjct: 268 LYPGKVTIDFNNLIIFKALTIYGIT--GRHLWETWYTVSRL 306

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score =  201 bits (513), Expect = 4e-62
 Identities = 73/341 (21%), Positives = 127/341 (37%), Gaps = 51/341 (14%)

Query: 12  KAAVAWEAGKPLIIQDVEV-APPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGH 70
           K+ V  +    + + +  +       EVR+KI  + LC +DL     K     +P   GH
Sbjct: 2   KSVV-NDTDGIVRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIF-KNGAHYYPITLGH 59

Query: 71  EAAGVVESVGEGVSDLEVGDHVL--PVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLA 128
           E +G +++VG GV DL  GD V   P+    C  C  C     + C              
Sbjct: 60  EFSGYIDAVGSGVDDLHPGDAVACVPLLP--CFTCPECLKGFYSQCAKYD---------- 107

Query: 129 DGQSRFSINGEPVNHFLGTS---TFSEYTVVHSGCVAKINPLAPLDKVCI---LSCGVST 182
                          F+G+     F+EY VV    V  +    P++       ++ G+  
Sbjct: 108 ---------------FIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGL-- 150

Query: 183 GLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 242
                 ++A+     +V + G G +GL A + A   GA  +  +D SS++   AK FG  
Sbjct: 151 ---HAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAM 207

Query: 243 DFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK 301
              N+SE      ++ + +         +E  G    +  A E          LVG   +
Sbjct: 208 QTFNSSEMS--APQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPH-AQLALVGTLHQ 264

Query: 302 DAVFMTKPIN--VLNERTLKGTF--FGNYKPRTDLPSVVDM 338
           D    +      +  E T+ G++  + +  P  +  +   +
Sbjct: 265 DLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRL 305

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score =  200 bits (511), Expect = 7e-62
 Identities = 84/340 (24%), Positives = 132/340 (38%), Gaps = 53/340 (15%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDL--YFWESKGQTPL-FPRIF 68
           +A       + L + D  V  P   E+ ++++  S+C TDL  + W++  +  +  P + 
Sbjct: 2   RALAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVT 61

Query: 69  GHEAAGVVESVGEGVSDLEVGDHVLPVFTGE----CGDCRHCRSDVSNMCDLLRINPVRG 124
           GHE +GVVE+VG GV   +VGDHV    + E    C  C  CR+   ++C   +      
Sbjct: 62  GHEFSGVVEAVGPGVRRPQVGDHV----SLESHIVCHACPACRTGNYHVCLNTQ------ 111

Query: 125 VMLADGQSRFSINGEPVNHFLGTS---TFSEYTVVHSGCVAKINPLAPLDKVCI---LSC 178
                               LG      F+EY VV +          P +   I      
Sbjct: 112 -------------------ILGVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAILEPFGN 152

Query: 179 GVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK 238
            V      T+       G SV + G G +GL AA   R +GA  I+  D +  R   A+ 
Sbjct: 153 AV-----HTVYAGSGVSGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP 207

Query: 239 FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGV 298
           +     VN  E D  + EV+  +T  GV+  +E +GN   +      +  G G A ++G+
Sbjct: 208 YA-DRLVNPLEED--LLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPG-GEARILGI 263

Query: 299 PSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDM 338
           PS    F      V+   T  G      +          +
Sbjct: 264 PSDPIRFDLAGELVMRGITAFGIA--GRRLWQTWMQGTAL 301

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score =  198 bits (506), Expect = 6e-61
 Identities = 78/337 (23%), Positives = 135/337 (40%), Gaps = 38/337 (11%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE--------SKGQTPL 63
           +A    E GKPL +Q++ V  P+  +V IK++   +C +D++  +         +     
Sbjct: 2   RAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVK 61

Query: 64  FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVR 123
            P   GHE AG +E VG+ V     GD V        G+C +CR    ++CD  R     
Sbjct: 62  LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLG-- 119

Query: 124 GVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 183
                      + +G           ++EY +V               +   L+C   T 
Sbjct: 120 ----------INFDG----------AYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITT 159

Query: 184 LGATLNVAKPERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 242
             A +  A  +   ++ V G  G +G  A + A+    + IIGVD   +  E AK+ G  
Sbjct: 160 YRA-VRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGAD 218

Query: 243 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 302
             +N S  D P+ E+     + GVD  ++   +   +    + +    G  V+VG+   D
Sbjct: 219 YVINASMQD-PLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMVGLFGAD 276

Query: 303 AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMY 339
             +    I  L+E    G+  GN   ++D   ++ + 
Sbjct: 277 LHYHAPLI-TLSEIQFVGSLVGN---QSDFLGIMRLA 309

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score =  197 bits (504), Expect = 2e-60
 Identities = 78/324 (24%), Positives = 135/324 (41%), Gaps = 51/324 (15%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL-FPRIFGH 70
           KA    E+   + +++V +  P   ++ +K++   +C TD +     G+ P   P   GH
Sbjct: 25  KAVR-LESVGNISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLH--GEFPSTPPVTLGH 81

Query: 71  EAAGVVESVGEGVSDLEVGDHVL--PVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLA 128
           E  G+V   G  V D+  G  +   P  +  CG C  C++   N+C  LR          
Sbjct: 82  EFCGIVVEAGSAVRDIAPGARITGDPNIS--CGRCPQCQAGRVNLCRNLR---------- 129

Query: 129 DGQSRFSINGEPVNHFLGTST---FSEYTVVHSGCVAKINPLAPLDKVCI---LSCGVST 182
                           +G      F+EY +V      +I              L+C +  
Sbjct: 130 ---------------AIGIHRDGGFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCL-- 172

Query: 183 GLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT 242
                ++++  + GS+VA+ G G +GL   + AR+AGA+ +I   R + +   A++ G T
Sbjct: 173 ---HGVDLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGAT 229

Query: 243 DFVNTSEHDRPIQEVIAEMTNG---GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP 299
             V+ S  D  + E IA        GVD  +EC G  + +  +      G G  V++GV 
Sbjct: 230 ATVDPSAGD--VVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAG-GTVVILGVL 286

Query: 300 SKDAVFMTKPINVL-NERTLKGTF 322
            +      +P ++L  E  + G+F
Sbjct: 287 PQGEKVEIEPFDILFRELRVLGSF 310

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score =  191 bits (487), Expect = 3e-58
 Identities = 85/343 (24%), Positives = 141/343 (41%), Gaps = 39/343 (11%)

Query: 10  TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE--SKGQTPLFPRI 67
             KAA+  +  +PL I+DV +  PQ  EV I+I    +CRTDL  W+     Q    P I
Sbjct: 3   KSKAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPII 62

Query: 68  FGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVML 127
            GHE AG +  VGE ++ ++ GD+V+   T     CR+CR    N+C    I    G   
Sbjct: 63  LGHENAGTIVEVGE-LAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIP---G--- 115

Query: 128 ADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGA- 186
                  + NG           FSEY +V S             +   L+   +T +GA 
Sbjct: 116 ------QTTNG----------GFSEYMLVKSSRWLVKLNSLSPVEAAPLADAGTTSMGAI 159

Query: 187 --TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKKFGVTD 243
              L          V V G+G + +   +  +    +  I+G+ RS K  + A + G   
Sbjct: 160 RQALPFISKFAEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADY 219

Query: 244 FVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD 302
                +     + +I ++T+G G   +++  G  +   +  + +    G  +LVG+  K 
Sbjct: 220 VSEMKD----AESLINKLTDGLGASIAIDLVGTEETTYNLGKLLAQE-GAIILVGMEGKR 274

Query: 303 AVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIR 345
                     +  + L G+ +G+     DL  VV +  +  I+
Sbjct: 275 VSLEAFDT-AVWNKKLLGSNYGS---LNDLEDVVRLSESGKIK 313

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score =  186 bits (473), Expect = 1e-55
 Identities = 70/360 (19%), Positives = 126/360 (35%), Gaps = 68/360 (18%)

Query: 12  KAAVAWEAGKPLIIQDVEV-APPQAMEVRIKIKYTSLCRTDL--YFWESKGQTPL----- 63
             +  W   + + +++V      +  E+ IK+K   +C +D+     + +G         
Sbjct: 32  LGSKVWRYPE-VRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTG 90

Query: 64  FPRIFGHEAAGVVESVGEGVSD------LEVGDHVL--PVFTGECGDCRHCRSDVSNMCD 115
           FP   GHE +GVV   G    +       E+G+ V    +    CG CR C     N C+
Sbjct: 91  FPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLW--CGHCRPCAEGFPNHCE 148

Query: 116 LLRINPVRGVMLADGQSRFSINGEPVNHFLGTS---TFSEYTVVHSGCVAKINPLAPLDK 172
            L                           LG +    F+EY  V +     +  L  + +
Sbjct: 149 NLN-------------------------ELGFNVDGAFAEYVKVDAKYAWSLRELEGVYE 183

Query: 173 VCI----------LSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASR 222
                         S   +      +       G +V + G G +GLAA    + AGAS+
Sbjct: 184 GDRLFLAGSLVEPTSVAYN---AVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASK 240

Query: 223 IIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMIS 281
           +I  + S  R   AK+ G    ++ ++ +    E + + TNG G    +E TG    +  
Sbjct: 241 VILSEPSEVRRNLAKELGADHVIDPTKEN--FVEAVLDYTNGLGAKLFLEATGVPQLVWP 298

Query: 282 AFECV-HDGWGVAVLVGVPSKDAVFMTKPIN--VLNERTLKGTFFGNYKPRTDLPSVVDM 338
             E V     G+   V + ++    +        +    + G+    +      P V+ +
Sbjct: 299 QIEEVIWRARGINATVAIVARADAKIPLTGEVFQVRRAQIVGSQ--GHSGHGTFPRVISL 356

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score =  182 bits (464), Expect = 1e-54
 Identities = 69/327 (21%), Positives = 124/327 (37%), Gaps = 54/327 (16%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF----PRI 67
            + V       L +++  +  P   EV +++    +C +D+++WE  G+   F    P +
Sbjct: 9   LSLV-VHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWE-YGRIGNFIVKKPMV 66

Query: 68  FGHEAAGVVESVGEGVSDLEVGDHVLPVFTGE----CGDCRHCRSDVSNMCDLLRINPVR 123
            GHEA+G VE VG  V  L+ GD V      E      +   C+    N+   +      
Sbjct: 67  LGHEASGTVEKVGSSVKHLKPGDRV----AIEPGAPRENDEFCKMGRYNLSPSIF---FC 119

Query: 124 GVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI---LSCGV 180
                DG                      +   ++    K+      ++  +   LS G+
Sbjct: 120 ATPPDDG------------------NLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGI 161

Query: 181 STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 240
                          G  V V G G +G+     A+  GA++++  D S+ R  +AK+ G
Sbjct: 162 -----HACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIG 216

Query: 241 VTDFVNTSEHDRPIQEVIAEMTN---GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVG 297
               +  S+     QE+  ++        + ++ECTG   ++ +       G G  VLVG
Sbjct: 217 ADLVLQISKES--PQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVG 273

Query: 298 VPSKDAVFMTKPIN--VLNERTLKGTF 322
           + S+       P+    + E  +KG F
Sbjct: 274 LGSEMTTV---PLLHAAIREVDIKGVF 297

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score =  181 bits (461), Expect = 4e-54
 Identities = 72/343 (20%), Positives = 124/343 (36%), Gaps = 57/343 (16%)

Query: 1   MSSTA-----GLILTCKAAVAWEAGKPLIIQDVEVAP-PQAMEVRIKIKYTSLCRTDLYF 54
           M+S+A     G+    +  + W +     ++ V+     +  EV + ++ T +C +D++F
Sbjct: 1   MASSASKTNIGVFTNPQHDL-WISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHF 59

Query: 55  WESKGQTPLF----PRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGE----CGDCRHC 106
           W+  G           + GHE+AG V +V   V  ++VGD V      E    C  C  C
Sbjct: 60  WK-HGCIGPMIVECDHVLGHESAGEVIAVHPSVKSIKVGDRV----AIEPQVICNACEPC 114

Query: 107 RSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP 166
            +   N C+ +            G                      Y    +    KI  
Sbjct: 115 LTGRYNGCERVD---FLSTPPVPG------------------LLRRYVNHPAVWCHKIGN 153

Query: 167 LAPLDKVCI--LSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRII 224
           ++  +   +  LS  +     A L  A    G  V + G G +GL     A+ AGA  ++
Sbjct: 154 MSYENGAMLEPLSVAL-----AGLQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLV 208

Query: 225 GVDRSSKRFEEAKKFGVTDFVNTSEHDRP--IQEVIAEMTNG-GVDRSVECTGNIDNMIS 281
             D    R + AK+       +  E        + I E   G     ++ECTG   ++ +
Sbjct: 209 ITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAA 268

Query: 282 AFECVHDGWGVAVLVGVPSKDAVFMTKPIN--VLNERTLKGTF 322
           A   V  G G   ++GV   +      P     + E  L+  +
Sbjct: 269 AIWAVKFG-GKVFVIGVGKNEIQI---PFMRASVREVDLQFQY 307

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352

 Score =  174 bits (443), Expect = 1e-51
 Identities = 71/338 (21%), Positives = 117/338 (34%), Gaps = 39/338 (11%)

Query: 14  AVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAA 73
             A  +   +   + E   P   +  ++    + C +D++             I GHEA 
Sbjct: 3   GFAMLSIGKVGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAV 62

Query: 74  GVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSR 133
           G V  VG  V D + GD V+             +         +               +
Sbjct: 63  GEVVEVGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGM-----------LAGWK 111

Query: 134 FS--INGEPVNHFLGTSTFSEYTVVH---SGCVAKINPLAPLDKVCILSCGVSTGLGATL 188
           FS   +G           F E+  V+         +    PL+   ++   ++TG     
Sbjct: 112 FSNVKDG----------VFGEFFHVNDADMNLA-HLPKEIPLEAAVMIPDMMTTGFHGAE 160

Query: 189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS 248
             A  + G +V V G+G VGL +  GA   GA RI  V       + A ++G TD +N  
Sbjct: 161 L-ANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYK 219

Query: 249 EHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMT 307
             D  I E I + T+G GVD+ V   G++     A + +  G      V           
Sbjct: 220 NGD--IVEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPG-SDIGNVNYLG------- 269

Query: 308 KPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIR 345
           +  N+   R+  G   G+      L     + M ++I 
Sbjct: 270 EGDNIDIPRSEWGVGMGHKHIHGGLCPGGRLRMERLID 307

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score =  173 bits (440), Expect = 4e-51
 Identities = 75/329 (22%), Positives = 127/329 (38%), Gaps = 57/329 (17%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF----PRI 67
            +AV       L ++   +  P+  EV +++ Y  +C +D++++E  G+   F    P +
Sbjct: 6   LSAV-LYKQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYE-HGRIADFIVKDPMV 63

Query: 68  FGHEAAGVVESVGEGVSDLEVGDHVL--PVFTGECGDCRHCRSDVSNMCDLLRINPVRGV 125
            GHEA+G V  VG+ V  L+ GD V   P     C  C+ C+    N+C  L        
Sbjct: 64  IGHEASGTVVKVGKNVKHLKKGDRVAVEPGVP--CRRCQFCKEGKYNLCPDLT------- 114

Query: 126 MLADGQSRFSINGEPVNHFLGTS----TFSEYTVVHSGCVAKINPLAPLDK-VCI--LSC 178
                             F  T       + Y V  +    K+     L++   +  LS 
Sbjct: 115 ------------------FCATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALLEPLSV 156

Query: 179 GVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK 238
           GV          A  + G++V V G G +GL +   A+  GA  ++   RS +R E AK 
Sbjct: 157 GV-----HACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAF-VVCTARSPRRLEVAKN 210

Query: 239 FGVTDFVNTSEHDRPIQEVIAEMTNG---GVDRSVECTGNIDNMISAFECVHDGWGVAVL 295
            G    +           +I  + +      + +++C+GN   +         G G  +L
Sbjct: 211 CGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GTLML 269

Query: 296 VGVPSKDAVFMTKPIN--VLNERTLKGTF 322
           VG+ S+       P+      E  +K  F
Sbjct: 270 VGMGSQMVTV---PLVNACAREIDIKSVF 295

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score =  172 bits (438), Expect = 8e-51
 Identities = 64/344 (18%), Positives = 110/344 (31%), Gaps = 46/344 (13%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDL--YFWESKGQTPL-FPRIF 68
           KA          ++ +     P++ E  ++     +C TD         G        + 
Sbjct: 2   KAIAVKRGEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVL 61

Query: 69  GHEAAGVVESVGEGVSDLEVGDHVL--PVFTGECGDCRHCRSDVSNMCDLLRINPVRGVM 126
           GHEA GVV  V    ++LE GD V+         G   +   D  +M           V 
Sbjct: 62  GHEAVGVV--VDPNDTELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVG 119

Query: 127 LADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI--LSCGV-STG 183
              G                    SE+       + +I          I  +S    +  
Sbjct: 120 A-HG------------------YMSEFFTSPEKYLVRIPRSQAELGFLIEPISITEKALE 160

Query: 184 LGATLNVAKPERGSSVAVFGLGAVGLAAAEGARI--AGASRIIGV---DRSSKRFEEAKK 238
                  A     SS  V G G++GL      ++   G   +  +   DR     +  ++
Sbjct: 161 HAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEE 220

Query: 239 FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGV 298
              T +V++ +      E + ++    +D   E TG   + I + + +    GV  L+GV
Sbjct: 221 LDAT-YVDSRQTP---VEDVPDVY-EQMDFIYEATGFPKHAIQSVQALAPN-GVGALLGV 274

Query: 299 PSKDAVFMTKPIN----VLNERTLKGTFFGNYKPRTDLPSVVDM 338
           PS  A  +         VL+ + L G+   N        + V  
Sbjct: 275 PSDWAFEVDAGAFHREMVLHNKALVGSV--NSHVEHFEAATVTF 316

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score =  171 bits (434), Expect = 4e-50
 Identities = 62/356 (17%), Positives = 107/356 (30%), Gaps = 51/356 (14%)

Query: 12  KAAVAWEAGKPLIIQDVEV-APPQAMEVRIKIKYTSLCRTDL-----YFWESKGQTPLFP 65
           KA +       + ++DV+        +++I+  Y  +C  D          S        
Sbjct: 2   KAIIVKPPNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDF 61

Query: 66  RIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGV 125
            + GHEA GVVE    G S    GD V+PV    CG CR+C     + C+        G+
Sbjct: 62  LVLGHEAIGVVEESYHGFS---QGDLVMPVNRRGCGICRNCLVGRPDFCETGEFG-EAGI 117

Query: 126 MLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI--LSCGV--- 180
              DG                     E+       + KI        +    L+      
Sbjct: 118 HKMDG------------------FMREWWYDDPKYLVKIPKSIEDIGILAQPLADIEKSI 159

Query: 181 ------STGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE 234
                    +              V V G G +G+      R  G    +   R     E
Sbjct: 160 EEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVE 219

Query: 235 EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG-NIDNMISAFECVHDGWGVA 293
           +            S +     + + +   G  D  ++ TG +++ + +    +    GV 
Sbjct: 220 QTVIEETKTNYYNSSNG---YDKLKDSV-GKFDVIIDATGADVNILGNVIPLLGRN-GVL 274

Query: 294 VLVGVPSKDAV-FMTKPIN--VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRF 346
            L G  +  +V    K +   V   +T+ G   G    +      V    +    +
Sbjct: 275 GLFGFSTSGSVPLDYKTLQEIVHTNKTIIGLVNGQ---KPHFQQAVVHLASWKTLY 327

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score =  167 bits (426), Expect = 3e-49
 Identities = 89/322 (27%), Positives = 131/322 (40%), Gaps = 39/322 (12%)

Query: 10  TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQTPLFPRIF 68
             KAAV    G PL I +V V  P   +V++KI+ + +C TDL+  +      P  P I 
Sbjct: 2   MMKAAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIP 61

Query: 69  GHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVML 127
           GHE  G V +VG GVS ++ GD V +P     CG C HC      +C+  +         
Sbjct: 62  GHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQN-------- 113

Query: 128 ADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSC-GVSTGLGA 186
               + +S+NG           + EY V     V  +       ++  + C GV T    
Sbjct: 114 ----TGYSVNG----------GYGEYVVADPNYVGLLPDKVGFVEIAPILCAGV-TVYKG 158

Query: 187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN 246
            L V     G  V + G+G +G  A + AR  G  R+  VD    +   A++ G    VN
Sbjct: 159 -LKVTDTRPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGAEVAVN 216

Query: 247 TSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA--- 303
             + D P   +  E+  GG    +    +      A   V  G G   L G+P  D    
Sbjct: 217 ARDTD-PAAWLQKEI--GGAHGVLVTAVSPKAFSQAIGMVRRG-GTIALNGLPPGDFGTP 272

Query: 304 VFMTKPINVLNERTLKGTFFGN 325
           +F      VL   T++G+  G 
Sbjct: 273 IFDV----VLKGITIRGSIVGT 290

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score =  166 bits (424), Expect = 7e-49
 Identities = 77/325 (23%), Positives = 133/325 (40%), Gaps = 41/325 (12%)

Query: 10  TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQTPLFPRIF 68
           T K  + +E+   L  +D+ V  P+A E+ I +KY+ +C TDL+ W          P + 
Sbjct: 5   TQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVG 64

Query: 69  GHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVML 127
           GHE AGVV  +GE V   ++GD+  +    G C  C +C     + C    +        
Sbjct: 65  GHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADL-------- 116

Query: 128 ADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSC-GVSTGLGA 186
               S ++ +G          +F +Y    +   A I     L +V  + C G++     
Sbjct: 117 ----SGYTHDG----------SFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKA- 161

Query: 187 TLNVAKPERGSSVAVFGLG------AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 240
            L  A    G  VA+ G        AV  A A G       R++G+D    + E  +  G
Sbjct: 162 -LKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGY------RVLGIDGGEGKEELFRSIG 214

Query: 241 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS 300
              F++ ++    +  V+   T+GG    +  + +   + ++   V    G  VLVG+P+
Sbjct: 215 GEVFIDFTKEKDIVGAVLKA-TDGGAHGVINVSVSEAAIEASTRYVRAN-GTTVLVGMPA 272

Query: 301 KDAVFMTKPINVLNERTLKGTFFGN 325
                      V+   ++ G++ GN
Sbjct: 273 GAKCCSDVFNQVVKSISIVGSYVGN 297

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score =  164 bits (418), Expect = 4e-48
 Identities = 95/325 (29%), Positives = 144/325 (44%), Gaps = 49/325 (15%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQTPLFPRIFGH 70
           KAAV  +  +PL I++VE       EV ++IK   +C TDL+         P  P I GH
Sbjct: 2   KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGH 61

Query: 71  EAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLAD 129
           E  G+VE VG GV+ L+VGD V +P     CG C +C S    +C+  +           
Sbjct: 62  EGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKN---------- 111

Query: 130 GQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSC-GVSTGLGATL 188
             + +S++G           ++EY    +  V KI      ++   + C GV+T     L
Sbjct: 112 --AGYSVDG----------GYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKA--L 157

Query: 189 NVAKPERGSSVAVFGLG-----AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD 243
            V   + G  VA++G+G     AV  A A G        ++ VD   ++ E AK+ G   
Sbjct: 158 KVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGL------NVVAVDIGDEKLELAKELGADL 211

Query: 244 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD- 302
            VN  + D    + + E   GGV  +V    +     SA+  +  G G  VLVG+P ++ 
Sbjct: 212 VVNPLKED--AAKFMKEKV-GGVHAAVVTAVSKPAFQSAYNSIRRG-GACVLVGLPPEEM 267

Query: 303 --AVFMTKPINVLNERTLKGTFFGN 325
              +F T    VLN   + G+  G 
Sbjct: 268 PIPIFDT----VLNGIKIIGSIVGT 288

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398

 Score =  156 bits (396), Expect = 2e-44
 Identities = 65/301 (21%), Positives = 123/301 (40%), Gaps = 42/301 (13%)

Query: 21  KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFP-RIFGHEAAGVVESV 79
            P +  +        +   +K+  T++C +D + +   G+  +    + GHE  G V   
Sbjct: 21  YPKLEHNNRKLEHAVI---LKVVSTNICGSDQHIYR--GRFIVPKGHVLGHEITGEVVEK 75

Query: 80  GEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGE 139
           G  V  +++GD V   F   CG CR+C+   S++C+   +NP   +            G 
Sbjct: 76  GSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADL---------GAFGF 126

Query: 140 PVNHFLGTSTFSEYTVV---HSGCVA---KINPLAPLDKVCILSCGVSTGLGATLNVAKP 193
            +  + G    +EY +V       +    K   +  +  + ++S  + TG    ++ A  
Sbjct: 127 DLKGWSGGQ--AEYVLVPYADYMLLKFGDKEQAMEKIKDLTLISDILPTGFHGCVS-AGV 183

Query: 194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRP 253
           + GS V + G G VG  AA GAR+ GA+ +I  D++ +R +     G    ++      P
Sbjct: 184 KPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFET-IDLRNSA-P 241

Query: 254 IQEVIAEMTNG-GVDRSVECTG--------------NIDNMISAFECVHDGWGVAVLVGV 298
           +++ I ++     VD  V+  G                  + S F+ V  G  + +  G+
Sbjct: 242 LRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGI-PGI 300

Query: 299 P 299
            
Sbjct: 301 Y 301

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398

 Score =  152 bits (385), Expect = 1e-42
 Identities = 70/263 (26%), Positives = 105/263 (39%), Gaps = 29/263 (11%)

Query: 21  KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFP-RIFGHEAAGVVESV 79
            P +             V +K+  T++C +D +     G+T      + GHE  G V   
Sbjct: 21  YPKMQDPRGKKIEH--GVILKVVSTNICGSDQHMVR--GRTTAQVGLVLGHEITGEVIEK 76

Query: 80  GEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRF-SING 138
           G  V +L++GD V   F   CG CR C+   + +C    +NP R      G        G
Sbjct: 77  GRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCL--TVNPARAGGAY-GYVDMGDWTG 133

Query: 139 EPVNHFLGTSTFSEYTVV---HSGCVA---KINPLAPLDKVCILSCGVSTGLGATLNVAK 192
                       +EY +V       +    +   +  +  +  LS  + TG    +  A 
Sbjct: 134 ----------GQAEYVLVPYADFNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGAVT-AG 182

Query: 193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR 252
              GS+V V G G VGLAAA  AR+ GA+ +I  D +  R   AK  G     + S    
Sbjct: 183 VGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEI-ADLSLDT- 240

Query: 253 PIQEVIAEMTNG-GVDRSVECTG 274
           P+ E IA +     VD +V+  G
Sbjct: 241 PLHEQIAALLGEPEVDCAVDAVG 263

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369

 Score =  115 bits (290), Expect = 2e-29
 Identities = 82/342 (23%), Positives = 121/342 (35%), Gaps = 73/342 (21%)

Query: 9   LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIF 68
           L  KA  A+ A +PL   D+    P   +V+I+I Y  +C +DL+   S+    ++P + 
Sbjct: 21  LKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVP 80

Query: 69  GHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVML 127
           GHE  G V +VG+ V     GD V +      C  C  C   + N CD            
Sbjct: 81  GHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCD------------ 128

Query: 128 ADGQSRFSINGEPVNHFLGTST---FSEYTVVHSGCVAKI-NPLAPLDKVCILSCGVSTG 183
                  + N           T   +S+  VVH   V +I +P   L  V  L C     
Sbjct: 129 ---HMTGTYNS--PTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCA---- 179

Query: 184 LGATL------NVAKPERGSSVAVFGLG-----AVGLAAAEGARIAGASRIIGVDRSSKR 232
            G T         A P  G  V V G+G      + LA A GA +   +       S  +
Sbjct: 180 -GITTYSPLRHWQAGP--GKKVGVVGIGGLGHMGIKLAHAMGAHVVAFT------TSEAK 230

Query: 233 FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGW-- 290
            E AK  G  + VN+   D        EM             + D +++     H+    
Sbjct: 231 REAAKALGADEVVNSRNAD--------EMA--------AHLKSFDFILNTVAAPHN-LDD 273

Query: 291 --------GVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFG 324
                   G   LVG P+           ++  R + G+  G
Sbjct: 274 FTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIG 315

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score =  113 bits (284), Expect = 9e-29
 Identities = 75/343 (21%), Positives = 131/343 (38%), Gaps = 43/343 (12%)

Query: 12  KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL-FPRIF 68
           +A V    G P  L + D+ V  P   EVR+++K  +L   D++  +      L  P + 
Sbjct: 2   RAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVL 61

Query: 69  GHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLA 128
           G + +GVV++VG GV     GD V+      CG C  C +   N+C              
Sbjct: 62  GADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCP------------- 108

Query: 129 DGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL 188
               R+ I GE  +   G  T++EY V+    +A        ++   +     T     +
Sbjct: 109 ----RYQILGEHRH---G--TYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVV 159

Query: 189 NVAKPERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 247
           +      G  V V      V +AA + A++ GA R+I    S  +   AK  G  + VN 
Sbjct: 160 DKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKALGADETVNY 218

Query: 248 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFM 306
           +  D    + +  +T G G D+ V+ TG         +   +G G   + G  S      
Sbjct: 219 THPD--WPKEVRRLTGGKGADKVVDHTGA-LYFEGVIKATANG-GRIAIAGASSGYEG-- 272

Query: 307 TKPINV----LNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIR 345
              +        + ++ G+       ++ L  ++       ++
Sbjct: 273 --TLPFAHVFYRQLSILGSTMA---SKSRLFPILRFVEEGKLK 310

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score =  112 bits (283), Expect = 2e-28
 Identities = 67/329 (20%), Positives = 109/329 (33%), Gaps = 43/329 (13%)

Query: 23  LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL---FPRIFGHEAAGVVESV 79
           L + +  V      ++ ++    SL   D      +    L   FP +   + +GVVE+V
Sbjct: 41  LKLAERPVPEAGEHDIIVRTLAVSLNYRDK--LVLETGMGLDLAFPFVPASDMSGVVEAV 98

Query: 80  GEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGE 139
           G+ V+    GD V+  F     D     +  +   + L                    G 
Sbjct: 99  GKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETL--------------------GG 138

Query: 140 PVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSV 199
                 G    SEY V+  G            +   L C   T   A +       G  V
Sbjct: 139 AHP---G--VLSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRV 193

Query: 200 AVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIA 259
            V G G V L   + A+  GA  +I    S ++ + A   G    +N  E D    E + 
Sbjct: 194 VVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFALGADHGINRLEED--WVERVY 250

Query: 260 EMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL--NER 316
            +T   G D  +E  G    +  + + V    G   ++GV     V  + P+  L     
Sbjct: 251 ALTGDRGADHILEIAGG-AGLGQSLKAVAPD-GRISVIGVLEGFEV--SGPVGPLLLKSP 306

Query: 317 TLKGTFFGNYKPRTDLPSVVDMYMNKVIR 345
            ++G   G    R  L  +V       ++
Sbjct: 307 VVQGISVG---HRRALEDLVGAVDRLGLK 332

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366

 Score =  111 bits (281), Expect = 4e-28
 Identities = 73/342 (21%), Positives = 119/342 (34%), Gaps = 74/342 (21%)

Query: 10  TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFG 69
                 A +    L   +         +VR K+ Y  +C +DL+  ++     ++P + G
Sbjct: 16  KAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGFSMYPLVPG 75

Query: 70  HEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLA 128
           HE  G V  VG  V  + VGD V +    G C  C  C +D+ N C              
Sbjct: 76  HEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCP------------- 122

Query: 129 DGQSRFSINGEPVNHFLGTST---FSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLG 185
             +   +      +   GT T   +S + V +   + +     PLD    L C      G
Sbjct: 123 --KMILTYASIYHD---GTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCA-----G 172

Query: 186 ATL-------NVAKPERGSSVAVFGLG-----AVGLAAAEGARIAGASRIIGVDRSSKRF 233
            T+        + +P  G  + + GLG     AV  A A G+++   S        SK+ 
Sbjct: 173 ITVYSPLKYFGLDEP--GKHIGIVGLGGLGHVAVKFAKAFGSKVTVIST-----SPSKKE 225

Query: 234 EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGW--- 290
           E  K FG   F+ + + +        +M            G +D +I     VH      
Sbjct: 226 EALKNFGADSFLVSRDQE--------QMQ--------AAAGTLDGIIDTVSAVHP-LLPL 268

Query: 291 -------GVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN 325
                  G  +LVG P K        + +   + + G+  G 
Sbjct: 269 FGLLKSHGKLILVGAPEKPLELPAFSL-IAGRKIVAGSGIGG 309

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357

 Score =  111 bits (279), Expect = 7e-28
 Identities = 79/342 (23%), Positives = 125/342 (36%), Gaps = 74/342 (21%)

Query: 10  TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFG 69
                 A +    L      +      +V I+I    +C TDL+  ++      +P + G
Sbjct: 9   KTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYPMVPG 68

Query: 70  HEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLA 128
           HE  G V  VG  VS   VGD V +    G CG C  C  D+   C        + +   
Sbjct: 69  HEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCP-------KKI--- 118

Query: 129 DGQSRFSINGEPVNHFLGTST---FSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLG 185
                +S N   +N   G  T   F++ TVVH   V KI     +++   L C      G
Sbjct: 119 -----WSYNDVYIN---GQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCA-----G 165

Query: 186 ATL-------NVAKPERGSSVAVFGLG-----AVGLAAAEGARIAGASRIIGVDRSSKRF 233
            T+        + +P  G    + GLG      V +A A G  +   S       + KR 
Sbjct: 166 VTVYSPLSHFGLKQP--GLRGGILGLGGVGHMGVKIAKAMGHHVTVISS-----SNKKRE 218

Query: 234 EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGW--- 290
           E  +  G  D+V  S+          +M+        E   ++D +I      H      
Sbjct: 219 EALQDLGADDYVIGSDQA--------KMS--------ELADSLDYVIDTVPVHHA-LEPY 261

Query: 291 -------GVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN 325
                  G  +L+GV +    F+T  + +L  + + G+F G+
Sbjct: 262 LSLLKLDGKLILMGVINNPLQFLTPLL-MLGRKVITGSFIGS 302

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score =  109 bits (273), Expect = 1e-26
 Identities = 53/364 (14%), Positives = 107/364 (29%), Gaps = 69/364 (18%)

Query: 21  KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-------------------- 60
           K L + +V +      EV + +  +S+    +  W +  +                    
Sbjct: 48  KSLRLGEVPMPELAPDEVLVAVMASSINYNTV--WSAMFEPIPTFHFLKQNARQGGWATR 105

Query: 61  TPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRIN 120
                 + G + +GVV   G GV   + GDHV+ V      +          +    R  
Sbjct: 106 HDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVI-VHPAHVDEQEPATHGDGMLGTEQRA- 163

Query: 121 PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 180
              G     G                    +EY VV +  +         ++  +     
Sbjct: 164 --WGFETNFG------------------GLAEYGVVRASQLLPKPAHLTWEEAAVSPLCA 203

Query: 181 STGLGA--TLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK 237
            T      +   A+ ++G  V ++G  G +G  A +  +  G    + V  S+++    +
Sbjct: 204 GTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGG-IPVAVVSSAQKEAAVR 262

Query: 238 KFGVTDFVNTSEHD----------------RPIQEVIAEMTNGGVDRSVECTGNIDNMIS 281
             G    +N +E                  R + +++ E      D   E TG       
Sbjct: 263 ALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGR-VTFGL 321

Query: 282 AFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMN 341
           +      G G  V  G  S            +  + + G+   N     +  +   ++ +
Sbjct: 322 SVIVARRG-GTVVTCGSSSGYLHTFDNRYLWMKLKKIVGSHGAN---HEEQQATNRLFES 377

Query: 342 KVIR 345
             + 
Sbjct: 378 GAVV 381

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348

 Score =  107 bits (269), Expect = 1e-26
 Identities = 73/343 (21%), Positives = 121/343 (35%), Gaps = 76/343 (22%)

Query: 9   LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIF 68
           +  K    +   +     D         +V I I Y  +C +D++   S+ +  ++P I 
Sbjct: 3   VQSKGFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMIP 62

Query: 69  GHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVML 127
           GHE AG+++ VG+GV   ++GD V +  F   C  C+ C+      C             
Sbjct: 63  GHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCT------------ 110

Query: 128 ADGQSRFSINGEPVNHFLGTST---FSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGL 184
              +  F+ +     H         +S   VV    V  ++  APL+KV  L C      
Sbjct: 111 ---KVVFTYDCLDSFH-DNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCA----- 161

Query: 185 GATL------NVAKPERGSSVAVFGLG-----AVGLAAAEGARIAGASRIIGVDRSSKRF 233
           G T       +      G+ V V G G     AV  A A GA ++  +R        K+ 
Sbjct: 162 GITTYSPLKFSKVTK--GTKVGVAGFGGLGSMAVKYAVAMGAEVSVFAR-----NEHKK- 213

Query: 234 EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHD----- 288
           ++A   GV  F    +                     +C   +D +IS     +D     
Sbjct: 214 QDALSMGVKHFYTDPK---------------------QCKEELDFIISTIPTHYDLKDYL 252

Query: 289 ----GWGVAVLVGVPSKDAVFMTKPINVL--NERTLKGTFFGN 325
                 G   LVG+P  +   +    + +    R + G+  G 
Sbjct: 253 KLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYGSLIGG 295

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score =  107 bits (270), Expect = 3e-26
 Identities = 59/360 (16%), Positives = 107/360 (29%), Gaps = 73/360 (20%)

Query: 12  KAAVAWEAGKP---LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT------- 61
            A +      P   + + DV V      E  + +  +S+    +    S  +        
Sbjct: 44  FAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSV--HTSIFEPLSTFGFL 101

Query: 62  -------------PLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRS 108
                         L   + G + AGVV   G GV+  + GD V+        +     +
Sbjct: 102 ERYGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHN 161

Query: 109 DVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA 168
           D     +      + G     G                    +E  +V S  +       
Sbjct: 162 DTMLDPE----QRIWGFETNFG------------------GLAEIALVKSNQLMPKPDHL 199

Query: 169 PLDKVCILSCGVSTGLGA--TLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIG 225
             ++        ST      + N A  ++G +V ++G  G +G  A + A   GA   I 
Sbjct: 200 SWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGA-NPIC 258

Query: 226 VDRSSKRFEEAKKFGVTDFVNTSEHDRPIQ---------------EVIAEMTNG-GVDRS 269
           V  S ++ E  +  G    ++ +                      + I E+T G  +D  
Sbjct: 259 VVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIV 318

Query: 270 VECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL--NERTLKGTFFGNYK 327
            E  G  +   ++      G G        S            L  + + + G+ F NY+
Sbjct: 319 FEHPGR-ETFGASVFVTRKG-GTITTCASTSGYMH--EYDNRYLWMSLKRIIGSHFANYR 374

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score =  105 bits (263), Expect = 1e-25
 Identities = 62/327 (18%), Positives = 109/327 (33%), Gaps = 67/327 (20%)

Query: 12  KAAVAWEAGKP---LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQTPLFPRI 67
           +A V    G P   + ++++E+A  +  +VR+K+    +  +D+   +   G  P  P +
Sbjct: 28  RALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAV 87

Query: 68  FGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVML 127
            G+E    V +VG  V+ L+ GD V+P   G                             
Sbjct: 88  GGNEGVAQVVAVGSNVTGLKPGDWVIPANAG----------------------------- 118

Query: 128 ADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGAT 187
                            LG  T+    V     + ++    PL     L     T     
Sbjct: 119 -----------------LG--TWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRML 159

Query: 188 LNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE----AKKFGVT 242
           ++  + + G SV        VG A  + A   G  R I V R     ++     K  G  
Sbjct: 160 MDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGL-RTINVVRDRPDIQKLSDRLKSLGAE 218

Query: 243 DFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK 301
             +   E  RP  E+     +      ++ C G   +       +  G G  V  G  +K
Sbjct: 219 HVITEEELRRP--EMKNFFKDMPQPRLALNCVGG-KSSTELLRQLARG-GTMVTYGGMAK 274

Query: 302 DAVFMTKPINVL--NERTLKGTFFGNY 326
             V     +++L   +  L+G +   +
Sbjct: 275 QPV--VASVSLLIFKDLKLRGFWLSQW 299

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360

 Score =   99 bits (250), Expect = 7e-24
 Identities = 70/342 (20%), Positives = 113/342 (33%), Gaps = 74/342 (21%)

Query: 13  AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEA 72
           A  + E  K       +  P    ++ IKI+   +C +D++           P + GHE 
Sbjct: 11  AIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEI 70

Query: 73  AGVVESVGEGV-SDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADG 130
            G V  +G    S L+VG  V +      C +C  C++D    C        + V     
Sbjct: 71  VGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCT-------KFV----- 118

Query: 131 QSRFSINGEPVNHFLGTST---FSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGAT 187
               + +    +   G  +   ++ Y  VH   V  I    P      L CG     G T
Sbjct: 119 ---TTYSQPYED---GYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCG-----GLT 167

Query: 188 L------NVAKPERGSSVAVFGLG-----AVGLAAAEGARIAGASRIIGVDRSSKRFEEA 236
           +      N   P  G  V + GLG        ++ A GA     SR      S KR E+A
Sbjct: 168 VYSPLVRNGCGP--GKKVGIVGLGGIGSMGTLISKAMGAETYVISR-----SSRKR-EDA 219

Query: 237 KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGW------ 290
            K G   ++ T E          +          +     D ++     + D        
Sbjct: 220 MKMGADHYIATLEE--------GDWGE-------KYFDTFDLIVVCASSLTDIDFNIMPK 264

Query: 291 -----GVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK 327
                G  V + +P +  +   KP   L   ++  +  G+ K
Sbjct: 265 AMKVGGRIVSISIPEQHEMLSLKPY-GLKAVSISYSALGSIK 305

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score = 97.9 bits (244), Expect = 5e-23
 Identities = 60/327 (18%), Positives = 100/327 (30%), Gaps = 66/327 (20%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHE 71
            A    +  +  +            +V ++++  ++  +D      +GQ        G +
Sbjct: 13  TALTVNDHDEVTVWNAAPCPMLPRDQVYVRVEAVAINPSD---TSMRGQFATPWAFLGTD 69

Query: 72  AAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQ 131
            AG V +VG  V+ ++VGD V        G                   P +G       
Sbjct: 70  YAGTVVAVGSDVTHIQVGDRV-------YGAQNEMCPR----------TPDQG------- 105

Query: 132 SRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST--------- 182
                             FS+YTV      AKI      ++   L  G+ST         
Sbjct: 106 -----------------AFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKLLG 148

Query: 183 -GLGATLNVAKPERGSSVAVF---GLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK 238
             L +      P     V V    G  A      +  R++G   I     S   F+ AK 
Sbjct: 149 LPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC--SPHNFDLAKS 206

Query: 239 FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWG-VAVLVG 297
            G  +  +       + + I   T   +  +++C  N+++    F  +    G    L  
Sbjct: 207 RGAEEVFDY--RAPNLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAGGHYVSLNP 264

Query: 298 VPSKDAVFMTKPINVLNERTLKGTFFG 324
            P   A        V  + TL  T FG
Sbjct: 265 FPEHAA----TRKMVTTDWTLGPTIFG 287

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score = 93.4 bits (233), Expect = 1e-21
 Identities = 56/273 (20%), Positives = 87/273 (31%), Gaps = 64/273 (23%)

Query: 1   MSSTAGLILTCKAAVAWEAGKP---LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWES 57
           MS         K     + G P   L ++   + P +  EV +++    +  +DL     
Sbjct: 1   MSLHG------KLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITG 54

Query: 58  K-GQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDL 116
                   P I G+E  G+VE+VG  VS   +G  VLP                      
Sbjct: 55  AYAHRIPLPNIPGYEGVGIVENVGAFVSRELIGKRVLP---------------------- 92

Query: 117 LRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCIL 176
                                        G  T+ EY    +  V  I           +
Sbjct: 93  ---------------------------LRGEGTWQEYVKTSADFVVPIPDSIDDFTAAQM 125

Query: 177 SCGVSTGLGATLNVAKPERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEE 235
                T           +R   + V     A+G   A+ ++I    R+I V R++K  EE
Sbjct: 126 YINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEE 184

Query: 236 AKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVD 267
             + G    ++TS       E + E+TNG G D
Sbjct: 185 LLRLGAAYVIDTSTAPLY--ETVMELTNGIGAD 215

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score = 92.8 bits (231), Expect = 2e-21
 Identities = 62/361 (17%), Positives = 108/361 (29%), Gaps = 93/361 (25%)

Query: 8   ILTCKAAVAWEAGKP---LIIQDVEVAPPQ--AMEVRIKIKYTSLCRTDLYF-------- 54
           ++T +A +  + G+P   L  Q  E+        EV +K   + +  +D+          
Sbjct: 1   MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSK 60

Query: 55  --WESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSN 112
               +   T       G+E    V  VG  VS LE GD V+P                  
Sbjct: 61  PAKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFG------------ 108

Query: 113 MCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK 172
                                               T+  + + +     K+ P     K
Sbjct: 109 ------------------------------------TWRTHALGNDDDFIKL-PNPAQSK 131

Query: 173 VCILSCGVSTGLGATLNV------------AKPERGSSVAVF--GLGAVGLAAAEGARIA 218
                 G++   GAT++V             K   G    +   G  AVG  A++  ++ 
Sbjct: 132 ANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLL 191

Query: 219 GASRIIGVDRSSKRFEE----AKKFGVTDFVNTSEHD-RPIQEVIAEMTN---GGVDRSV 270
                I V R     +E     K+ G T  +   +++ R     I E      G    ++
Sbjct: 192 NF-NSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLAL 250

Query: 271 ECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL--NERTLKGTFFGNYKP 328
            C G   +       +++  G+ +  G  S   V  T P ++      T  G +      
Sbjct: 251 NCVGG-KSSTGIARKLNNN-GLMLTYGGMSFQPV--TIPTSLYIFKNFTSAGFWVTELLK 306

Query: 329 R 329
            
Sbjct: 307 N 307

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score = 78.0 bits (193), Expect = 2e-16
 Identities = 57/261 (21%), Positives = 82/261 (31%), Gaps = 59/261 (22%)

Query: 12  KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL-FPRIF 68
           KA  A     P  L+  DVE        V + +K   +C  D    + + Q  +  P + 
Sbjct: 23  KAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEPPFVP 82

Query: 69  GHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLA 128
           G E AGVV S  EG S ++ GD V                                    
Sbjct: 83  GIETAGVVRSAPEG-SGIKPGDRV-------MA--------------------------- 107

Query: 129 DGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATL 188
                          F     ++E   V    +    P     +   L     T   A  
Sbjct: 108 ---------------FNFIGGYAERVAVAPSNILPTPPQLDDAEAVALIANYHTMYFAYA 152

Query: 189 NVAKPERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT 247
              +   G +V V G  G +G AA + A+  GA ++I V   +   E  K  G    +  
Sbjct: 153 RRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSVGADIVLPL 211

Query: 248 SEHDRPIQEVIAEMTNG-GVD 267
            E      + + E T G GVD
Sbjct: 212 EEGWA---KAVREATGGAGVD 229

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score = 73.0 bits (180), Expect = 1e-14
 Identities = 58/312 (18%), Positives = 95/312 (30%), Gaps = 86/312 (27%)

Query: 12  KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLY-----FWESKGQTPLF 64
           KA    + G P  L + D      +  ++ IK+   SL   D        + +K      
Sbjct: 8   KAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNL 67

Query: 65  PRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRG 124
           P   G++ +G V  +G  V+++ +GD V        G                       
Sbjct: 68  PSGLGYDFSGEVIELGSDVNNVNIGDKV-------MGI---------------------- 98

Query: 125 VMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI--N---------PLAPLDKV 173
                                    ++EY       + +             P A L   
Sbjct: 99  ----------------AGFPDHPCCYAEYVCASPDTIIQKLEKLSFLQAASLPTAGL--- 139

Query: 174 CILSCGVSTGLGATLNVAKPERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKR 232
                   T L A LN A+ ++G  V +    G VG  A + A+  G   +I    S + 
Sbjct: 140 --------TALQA-LNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTA-SKRN 188

Query: 233 FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGV 292
               K  G    +N  E D           +  VD  ++  G  D  I + +C+ +  G 
Sbjct: 189 HAFLKALGAEQCINYHEED------FLLAISTPVDAVIDLVGG-DVGIQSIDCLKET-GC 240

Query: 293 AVLVGVPSKDAV 304
            V V   +   V
Sbjct: 241 IVSVPTITAGRV 252

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score = 72.3 bits (178), Expect = 2e-14
 Identities = 31/230 (13%), Positives = 61/230 (26%), Gaps = 77/230 (33%)

Query: 12  KAAVAWEAGKP---LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIF 68
           +    W        + +  V++    A ++ ++ +   +   D  F ++         + 
Sbjct: 3   EQHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPINWSNGHVP 62

Query: 69  GHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLA 128
           G + AGV+  VG  V    +G  V                                    
Sbjct: 63  GVDGAGVIVKVGAKVDSKMLGRRVA----------------------------------- 87

Query: 129 DGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA---------PLDKVCILSCG 179
              +    +G          +F+E+TV+++  V  + P           P          
Sbjct: 88  -YHTSLKRHG----------SFAEFTVLNTDRVMTL-PDNLSFERAAALPC--------- 126

Query: 180 VSTGLGA--TLNVAKPERGSSVAVFGLGAVG-----LAAAEGARIAGASR 222
               L A          +   V + G GAV      +    G  +   S 
Sbjct: 127 --PLLTAWQAFEKIPLTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVSA 174

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score = 72.3 bits (178), Expect = 2e-14
 Identities = 42/313 (13%), Positives = 92/313 (29%), Gaps = 57/313 (18%)

Query: 23  LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQTPLFPRIFGHEAAGVVESVGE 81
           L    + V  P   +V IK+   S+  +D+ F + + GQ  +  R  G E  G + + G+
Sbjct: 37  LEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPRVKGRPAGFEGVGTIVAGGD 96

Query: 82  GV-SDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEP 140
              +   VG  V                                 +   G          
Sbjct: 97  EPYAKSLVGKRV----------------------------AFATGLSNWG---------- 118

Query: 141 VNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVA 200
                   +++EY V  +     +      +    +     T +    ++ K E   +  
Sbjct: 119 --------SWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIAM-FDIVKQEGEKAFV 169

Query: 201 VFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIA 259
           +      +       A+  G  R I   R  ++    K  G    +N    D   +  + 
Sbjct: 170 MTAGASQLCKLIIGLAKEEGF-RPIVTVRRDEQIALLKDIGAAHVLNEKAPD--FEATLR 226

Query: 260 EMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNER-T 317
           E+         ++         + F  +       ++ G    DA  + +P  ++ +   
Sbjct: 227 EVMKAEQPRIFLDAVTG-PLASAIFNAMPKR-ARWIIYGRLDPDATVIREPGQLIFQHKH 284

Query: 318 LKGTFFGNYKPRT 330
           ++G +   +  + 
Sbjct: 285 IEGFWLSEWMRQF 297

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score = 72.2 bits (178), Expect = 2e-14
 Identities = 60/338 (17%), Positives = 108/338 (31%), Gaps = 89/338 (26%)

Query: 12  KAAVAWEAGKP---LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL-FPRI 67
           +A   +E G P    +  D+ V  P+  +V IK+    +   + Y            P  
Sbjct: 31  RAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYT 90

Query: 68  FGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVML 127
            G + AGV+E+VG+  S  + GD V                                   
Sbjct: 91  PGSDVAGVIEAVGDNASAFKKGDRV--------------------FTSS----------- 119

Query: 128 ADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGAT 187
                              +  ++EY +     V K+               +    GA 
Sbjct: 120 -----------------TISGGYAEYALAADHTVYKLPE------------KLDFKQGAA 150

Query: 188 L---------NV---AKPERGSSVAVFGLGA--VGLAAAEGARIAGASRIIGVDRSSKRF 233
           +          +   A  + G SV V G  +  VGLAA + AR  G  +I+G   + +  
Sbjct: 151 IGIPYFTAYRALIHSACVKAGESVLVHG-ASGGVGLAACQIARAYGL-KILGTAGTEEGQ 208

Query: 234 EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGV 292
           +   + G  +  N  E +    + I +     G+D  +E   N  N+      +  G G 
Sbjct: 209 KIVLQNGAHEVFNHREVN--YIDKIKKYVGEKGIDIIIEMLAN-VNLSKDLSLLSHG-GR 264

Query: 293 AVLVGVPSKDAVFMTKPINVLNER-TLKGTFFGNYKPR 329
            ++VG      +    P + + +  ++ G    +    
Sbjct: 265 VIVVGSRGTIEIN---PRDTMAKESSIIGVTLFSSTKE 299

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score = 71.5 bits (176), Expect = 5e-14
 Identities = 43/250 (17%), Positives = 80/250 (32%), Gaps = 62/250 (24%)

Query: 23  LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESV 79
            + +D  V  P   ++ ++ ++  +  +D+ +  S G+   +   P   G E  G V ++
Sbjct: 41  TLSRDCPVPLPGDGDLLVRNRFVGVNASDINY--SAGRYDPSVKPPFDIGFEGIGEVVAL 98

Query: 80  GEGVS-DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSING 138
           G   S    VG  V                                              
Sbjct: 99  GLSASARYTVGQAVA--------------------------------------------- 113

Query: 139 EPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSS 198
                ++   +F+EYTVV +     + P    + + +L  G  T   +   +     G  
Sbjct: 114 -----YMAPGSFAEYTVVPASIATPV-PSVKPEYLTLLVSGT-TAYISLKELGGLSEGKK 166

Query: 199 VAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEV 257
           V V    G  G  A + ++ A    +IG   S ++    K  G    +N       +  V
Sbjct: 167 VLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKSLGCDRPINYKTEP--VGTV 223

Query: 258 IAEMTNGGVD 267
           + +    GVD
Sbjct: 224 LKQEYPEGVD 233

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score = 70.3 bits (173), Expect = 8e-14
 Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 2/83 (2%)

Query: 12 KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFG 69
                + G P  L   +   A P   E++++ K   +   D Y        P  P   G
Sbjct: 3  TRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLG 62

Query: 70 HEAAGVVESVGEGVSDLEVGDHV 92
           EAAG+V  VG GV  ++ GD V
Sbjct: 63 TEAAGIVSKVGSGVKHIKAGDRV 85

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score = 69.9 bits (172), Expect = 1e-13
 Identities = 28/83 (33%), Positives = 35/83 (42%), Gaps = 2/83 (2%)

Query: 12 KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFG 69
          K       G P  L   D E   P    V ++ K   L   D Y+       P  P   G
Sbjct: 3  KRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGLG 62

Query: 70 HEAAGVVESVGEGVSDLEVGDHV 92
           E AGVVE+VG+ V+  +VGD V
Sbjct: 63 AEGAGVVEAVGDEVTRFKVGDRV 85

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score = 70.0 bits (172), Expect = 1e-13
 Identities = 68/326 (20%), Positives = 104/326 (31%), Gaps = 84/326 (25%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL----FPRI 67
            AAV  EA  P +++ +    P   +V ++I+ +     D       G+ P      P I
Sbjct: 9   IAAVVEEANGPFVLRKLARPQPAPGQVLVQIEASGTNPLDAKI--RAGEAPHAQQPLPAI 66

Query: 68  FGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVML 127
            G + AG V +VG  V    VGD V        G                      GV  
Sbjct: 67  LGMDLAGTVVAVGPEVDSFRVGDAV-------FGL-------------------TGGVGG 100

Query: 128 ADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI-----------NPLAPLDKVCIL 176
             G                  T +++  V +  +A              PL  +      
Sbjct: 101 LQG------------------THAQFAAVDARLLASKPAALTMRQASVLPLVFI------ 136

Query: 177 SCGVSTGLGATLNVAKPERGSSVAVFGLGA--VGLAAAEGARIAGASRIIGVDRSSKRFE 234
                T     ++ A+ + G +V + G G   VG  A + A   GA R+    R S   E
Sbjct: 137 -----TAWEGLVDRAQVQDGQTVLIQG-GGGGVGHVAIQIALARGA-RVFATARGSDL-E 188

Query: 235 EAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVA 293
             +  G T    + E +    +  AE T G G D   +  G    + ++F  V     V 
Sbjct: 189 YVRDLGATPIDASREPE----DYAAEHTAGQGFDLVYDTLGG-PVLDASFSAVKRFGHVV 243

Query: 294 VLVGVPSKD-AVFMTKPINVLNERTL 318
             +G  +   A    K        TL
Sbjct: 244 SCLGWGTHKLAPLSFKQATYSGVFTL 269

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score = 69.6 bits (171), Expect = 2e-13
 Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 5/84 (5%)

Query: 12 KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL-FPRIF 68
          K  +  E G    +  +D  V      E+ IK KYT +   + YF   KG  P   P + 
Sbjct: 10 KVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYF--RKGIYPCEKPYVL 67

Query: 69 GHEAAGVVESVGEGVSDLEVGDHV 92
          G EA+G V + G+GV++ EVGD V
Sbjct: 68 GREASGTVVAKGKGVTNFEVGDQV 91

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score = 68.4 bits (168), Expect = 4e-13
 Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 7/87 (8%)

Query: 12 KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYF----WESKGQTPLFP 65
           AAV  + G P   + ++V+V  P   +VR++     +   D Y               P
Sbjct: 3  MAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEP-P 61

Query: 66 RIFGHEAAGVVESVGEGVSDLEVGDHV 92
           + G EAA VVE VG GV+D  VG+ V
Sbjct: 62 IVVGFEAAAVVEEVGPGVTDFTVGERV 88

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score = 67.0 bits (164), Expect = 1e-12
 Identities = 55/343 (16%), Positives = 104/343 (30%), Gaps = 83/343 (24%)

Query: 12  KAAVAWEAGK-----PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPR 66
           KA    +         L+  ++    P   ++ +++K  S+   D     S        +
Sbjct: 24  KAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDGTDWK 83

Query: 67  IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVM 126
           + G++AAG+V +VG  V+    GD V                               G +
Sbjct: 84  VIGYDAAGIVSAVGPDVTLFRPGDEVF----------------------------YAGSI 115

Query: 127 LADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI-----------NPLAPLDKVCI 175
           +  G                  T +E+ +V    V +             PL  +     
Sbjct: 116 IRPG------------------TNAEFHLVDERIVGRKPKTLDWAEAAALPLTSI----- 152

Query: 176 LSCGVST---GLGATLNVAKPERGSSVAVFGLGA---VGLAAAEGARIAGASRIIGVDRS 229
                 T        L+V KP  G++ A+  +G    VG  A + AR      +I     
Sbjct: 153 ------TAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASR 206

Query: 230 SKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDG 289
            +  E  K  G    ++   H +P+   +A +  G        T    +     + +   
Sbjct: 207 PETQEWVKSLGAHHVID---HSKPLAAEVAALGLGAPAFVFSTTHTDKHAAEIADLIAPQ 263

Query: 290 WGVAVLVGVPSKD-AVFMTKPINVLNERTLKGTFFGNYKPRTD 331
               ++    + D  +F  K +++ +E       FG       
Sbjct: 264 GRFCLIDDPSAFDIMLFKRKAVSIHHELMFTRPMFGTPDMSEQ 306

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score = 66.1 bits (162), Expect = 2e-12
 Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 7/86 (8%)

Query: 12 KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPR 66
          +A V    G    L +    +  PQ  E++I++K   L   DL     +G     P  P 
Sbjct: 5  RAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLM--VRQGNIDNPPKTPL 62

Query: 67 IFGHEAAGVVESVGEGVSDLEVGDHV 92
          + G E +G+VE++G+ V   E+GD V
Sbjct: 63 VPGFECSGIVEALGDSVKGYEIGDRV 88

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score = 65.3 bits (159), Expect = 6e-12
 Identities = 37/309 (11%), Positives = 75/309 (24%), Gaps = 106/309 (34%)

Query: 23  LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYF---------------------------- 54
           L +  ++   P   EV I+I+ + L  +DL                              
Sbjct: 20  LSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEG 79

Query: 55  -WESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNM 113
              S           G+E AGVV   G   +   +    +                    
Sbjct: 80  AMRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTV-------------------- 119

Query: 114 CDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKV 173
                                          +G + +S+Y  + +     +         
Sbjct: 120 -----------------------------AAIGGAMYSQYRCIPADQCLVLPE------- 143

Query: 174 CILSCGVSTGLGATLNV-----------AKPERGSSVAVFGL-GAVGLAAAEGARIAGAS 221
                G +   GA+  V            + E  S++        +G    +     G  
Sbjct: 144 -----GATPADGASSFVNPLTALGMVETMRLEGHSALVHTAAASNLGQMLNQICLKDGI- 197

Query: 222 RIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMI 280
           +++ + R  ++ +  K  G     N +       + + E     G   + + TG      
Sbjct: 198 KLVNIVRKQEQADLLKAQGAVHVCNAASPT--FMQDLTEALVSTGATIAFDATGGGKLGG 255

Query: 281 SAFECVHDG 289
               C+   
Sbjct: 256 QILTCMEAA 264

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score = 60.3 bits (147), Expect = 2e-10
 Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 7/86 (8%)

Query: 12  KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL---FPR 66
           +       G P  ++I    +      EV ++ +   + R D+   + +G  P       
Sbjct: 30  RFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDI--AQRQGSYPPPKDASP 87

Query: 67  IFGHEAAGVVESVGEGVSDLEVGDHV 92
           I G E +G +  VG GVS   VGD V
Sbjct: 88  ILGLELSGEIVGVGPGVSGYAVGDKV 113

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score = 59.2 bits (144), Expect = 5e-10
 Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 7/86 (8%)

Query: 12 KAAVAWEAGK-----PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPR 66
          KA    +  K          ++++  P+  E+ +KI+  S+   D    +        PR
Sbjct: 4  KAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVD--TKQRLMDVSKAPR 61

Query: 67 IFGHEAAGVVESVGEGVSDLEVGDHV 92
          + G +A GVVESVG  V+    GD V
Sbjct: 62 VLGFDAIGVVESVGNEVTMFNQGDIV 87

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 59.7 bits (145), Expect = 6e-10
 Identities = 49/250 (19%), Positives = 73/250 (29%), Gaps = 66/250 (26%)

Query: 23  LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEG 82
           L+ +    AP    EVRI ++   +   D     + G  P      G E AGVV   G G
Sbjct: 226 LVDEPTATAPLGDGEVRIAMRAAGVNFRDALI--ALGMYPG-VASLGSEGAGVVVETGPG 282

Query: 83  VSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVN 142
           V+ L  GD V+ +                                               
Sbjct: 283 VTGLAPGDRVMGMIPK-------------------------------------------- 298

Query: 143 HFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAV- 201
                  F    V     V +I       +   +     T   A +++A    G S+ V 
Sbjct: 299 ------AFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGLRPGESLLVH 352

Query: 202 FGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD---FVNTSEHDRPIQEVI 258
              G VG+AA + AR  GA  +       K     +   ++        S      ++  
Sbjct: 353 SAAGGVGMAAIQLARHLGA-EVYATASEDKW----QAVELSREHLA---SSRTCDFEQQF 404

Query: 259 AEMTNG-GVD 267
              T G GVD
Sbjct: 405 LGATGGRGVD 414

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score = 57.8 bits (140), Expect = 1e-09
 Identities = 22/100 (22%), Positives = 34/100 (34%), Gaps = 19/100 (19%)

Query: 12  KAAVAWEAGKP---LIIQDVEV-APPQAMEVRIKIKYTSLCRTDLY-------------- 53
            A V  + GK       Q++ +       EV +K+   S+   D+               
Sbjct: 23  MAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKR 82

Query: 54  -FWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGDHV 92
                K +   FP   G + +GVV   G  V   + GD V
Sbjct: 83  DPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEV 122

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score = 56.9 bits (138), Expect = 3e-09
 Identities = 57/276 (20%), Positives = 88/276 (31%), Gaps = 86/276 (31%)

Query: 12  KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL---FPR 66
            A    + G P  L +++V    P   EV +K+  ++L R DL   + +GQ         
Sbjct: 24  LAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADL--MQRQGQYDPPPGASN 81

Query: 67  IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVM 126
           I G EA+G V  +G G                                            
Sbjct: 82  ILGLEASGHVAELGPGC------------------------------------------- 98

Query: 127 LADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVS----- 181
               Q  + I G+     L     ++Y  V  G +  I              G++     
Sbjct: 99  ----QGHWKI-GDTAMALLPGGGQAQYVTVPEGLLMPIPE------------GLTLTQAA 141

Query: 182 ----TGLGATLNV---AKPERGSSVAVFGLGA--VGLAAAEGARIAGASRIIGVDRSSKR 232
                 L A   +      + G  V +   G   VG AA +  R+AGA   +    S K+
Sbjct: 142 AIPEAWLTAFQLLHLVGNVQAGDYVLIHA-GLSGVGTAAIQLTRMAGA-IPLVTAGSQKK 199

Query: 233 FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVD 267
            + A+K G     N  + D    E   + T G GV+
Sbjct: 200 LQMAEKLGAAAGFNYKKED--FSEATLKFTKGAGVN 233

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score = 54.1 bits (131), Expect = 2e-08
 Identities = 44/259 (16%), Positives = 67/259 (25%), Gaps = 72/259 (27%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL-FPRIFGH 70
           KA V    G PL + D+     +  EV ++++   L   D         T L  P I G 
Sbjct: 2   KAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGM 61

Query: 71  EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADG 130
           E  GVV            G                                         
Sbjct: 62  EVVGVV-----------EGRRY-------AA----------------------------- 74

Query: 131 QSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV 190
                         +     +E   V  G +  +      ++         T   A L  
Sbjct: 75  -------------LVPQGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLA-LKR 120

Query: 191 AKPERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE 249
           A+   G  V V    GA+G AA + AR  G  R++      ++       G  +    +E
Sbjct: 121 AQARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAATYAE 179

Query: 250 HDRPIQEVIAEMTNG-GVD 267
                           G+D
Sbjct: 180 VPE-------RAKAWGGLD 191

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.0 bits (108), Expect = 2e-05
 Identities = 54/356 (15%), Positives = 99/356 (27%), Gaps = 97/356 (27%)

Query: 27  DVEVAPPQAMEV-RIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESV--GEGV 83
           D +V       V R++  Y  L R  L   E +        +      G  ++    +  
Sbjct: 122 DNQVFAK--YNVSRLQ-PYLKL-RQALL--ELRPA----KNVLIDGVLGSGKTWVALDVC 171

Query: 84  SDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVN 142
              +V   +   +F     +C    + +  +  LL          +D  S   +    + 
Sbjct: 172 LSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQ 231

Query: 143 HFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI--------LSCGVSTGLGATLNVAKPE 194
             L           +         L  L  V          LSC +   L  T       
Sbjct: 232 AEL-RRLLKSKPYENC--------LLVLLNVQNAKAWNAFNLSCKI---LLTT------- 272

Query: 195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV-TDFVNTSEHDRP 253
           R   V  F      L+AA    I+       +D  S      +   +   +++    D P
Sbjct: 273 RFKQVTDF------LSAATTTHIS-------LDHHSMTLTPDEVKSLLLKYLDCRPQDLP 319

Query: 254 IQE---------VIAEMTNGGVDRS-----VECTGNIDNMISAFECVHDGWGVAVLVGVP 299
            +          +IAE    G+        V C   +  +I +         + VL    
Sbjct: 320 REVLTTNPRRLSIIAESIRDGLATWDNWKHVNCD-KLTTIIESS--------LNVLEPAE 370

Query: 300 SKD-----AVFM--TK-PINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRFS 347
            +      +VF      P  +L         + +          V + +NK+ ++S
Sbjct: 371 YRKMFDRLSVFPPSAHIPTILL------SLIWFDVIKS-----DVMVVVNKLHKYS 415

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.8 bits (97), Expect = 3e-04
 Identities = 40/305 (13%), Positives = 83/305 (27%), Gaps = 110/305 (36%)

Query: 83  VSDL---EVGDHVLPVFTGECGDCRHC---RSDVSN---MCDLLRINPVRGVMLADGQSR 133
           V +    +V D    + + E  +  H    +  VS    +   L       V       +
Sbjct: 30  VDNFDCKDVQDMPKSILSKE--EIDHIIMSKDAVSGTLRLFWTLLSKQEEMV------QK 81

Query: 134 FSINGEPVNH-FLGTSTFSEY------TVVHSGCVAKI---NPLAPLDKVCILSCGVSTG 183
           F      +N+ FL +   +E       T ++     ++   N +     V  L       
Sbjct: 82  FVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQP--YLK 139

Query: 184 LGATLNVAKPERGSSVAVFGLGAVG---LAAAEGARIAGASRIIGVDRSSKRFEEAKKFG 240
           L   L   +P +   V + G+   G   +A  +                S + +    F 
Sbjct: 140 LRQALLELRPAKN--VLIDGVLGSGKTWVAL-DVCL-------------SYKVQCKMDFK 183

Query: 241 VTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP 299
           +  F +N    + P  E + EM                 ++   +               
Sbjct: 184 I--FWLNLKNCNSP--ETVLEMLQ--------------KLLYQIDP-------------- 211

Query: 300 SKDAVFMTKPINVLNERTLKGTFFGNYKPRTD----LPSVVDMYMNKVIRFSSSRPSFRC 355
                                    N+  R+D    +   +     ++ R   S+P   C
Sbjct: 212 -------------------------NWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENC 246

Query: 356 VIIIR 360
           ++++ 
Sbjct: 247 LLVLL 251

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	361
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	100.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	100.0
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	100.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	100.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	100.0
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	100.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.96
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.9
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	99.26
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	98.91
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.89
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.77
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.65
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.61
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.57
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.46
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	98.25
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	98.19
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	98.13
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	98.13
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	98.09
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.09
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.04
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.95
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	97.95
2b25_A	336	Hypothetical protein; structural genomics, methyl	97.94
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	97.94
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.83
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	97.79
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.77
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.75
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.75
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	97.69
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.61
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.59
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	97.43
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.41
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	97.38
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	97.38
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	97.37
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	97.33
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	97.3
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	97.3
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	97.28
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	97.27
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	97.23
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	97.21
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	97.21
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	97.2
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	97.18
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	97.17
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	97.15
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.15
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	97.15
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	97.12
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	97.12
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	97.12
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	97.12
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	97.12
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	97.11
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	97.11
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	97.11
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	97.1
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	97.09
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	97.08
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	97.08
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	97.08
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	97.07
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.07
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	97.07
1xhl_A	297	Short-chain dehydrogenase/reductase family member	97.06
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	97.06
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	97.06
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.05
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	97.05
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	97.04
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	97.03
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	97.03
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	97.02
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.02
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	97.01
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	97.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	97.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	96.99
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	96.98
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	96.97
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	96.96
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	96.96
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	96.96
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	96.96
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	96.95
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	96.95
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	96.94
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	96.94
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	96.93
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	96.93
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	96.92
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	96.91
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	96.91
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	96.91
1spx_A	278	Short-chain reductase family member (5L265); paral	96.91
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	96.9
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	96.9
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	96.89
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	96.89
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	96.89
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	96.89
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	96.87
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	96.86
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	96.86
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	96.86
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	96.85
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.84
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	96.84
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	96.82
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	96.81
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	96.8
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	96.8
3imf_A	257	Short chain dehydrogenase; structural genomics, in	96.79
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	96.78
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	96.78
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.76
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	96.76
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.76
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	96.75
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	96.75
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	96.75
3e18_A	359	Oxidoreductase; dehydrogenase, NAD-binding, struct	96.75
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	96.74
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	96.74
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	96.74
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	96.74
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	96.73
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	96.73
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	96.72
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	96.72
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	96.72
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	96.71
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	96.71
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	96.7
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	96.69
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	96.69
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	96.68
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	96.68
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	96.68
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	96.67
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	96.67
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.67
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	96.66
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	96.66
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	96.66
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	96.66
4dqx_A	277	Probable oxidoreductase protein; structural genomi	96.65
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	96.65
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	96.65
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.64
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	96.64
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	96.64
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	96.64
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	96.63
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	96.63
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	96.62
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	96.62
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	96.62
1xkq_A	280	Short-chain reductase family member (5D234); parra	96.61
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	96.61
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	96.61
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.61
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	96.61
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	96.61
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.61
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	96.6
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	96.6
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	96.6
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	96.6
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	96.6
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.59
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	96.59
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	96.58
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	96.58
3cxt_A	291	Dehydrogenase with different specificities; rossma	96.58
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	96.57
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	96.57
3rih_A	293	Short chain dehydrogenase or reductase; structural	96.57
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	96.56
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	96.56
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	96.56
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	96.56
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	96.56
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	96.55
1mjf_A	281	Spermidine synthase; spermidine synthetase, struct	96.55
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	96.55
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	96.55
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	96.55
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	96.54
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	96.53
1sui_A	247	Caffeoyl-COA O-methyltransferase; rossmann fold, p	96.52
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	96.52
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	96.52
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	96.51
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	96.51
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	96.51
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	96.5
1nvm_B	312	Acetaldehyde dehydrogenase (acylating), 4-hydroxy-	96.5
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	96.49
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	96.49
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	96.49
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	96.48
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	96.48
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	96.48
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	96.48
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	96.48
3tr6_A	225	O-methyltransferase; cellular processes; HET: SAH;	96.47
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	96.46
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	96.46
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	96.45
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	96.45
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	96.45
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	96.44
2glx_A	332	1,5-anhydro-D-fructose reductase; NADP(H) dependen	96.44
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	96.44
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	96.44
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.43
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	96.43
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	96.43
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	96.43
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	96.43
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	96.41
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	96.4
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	96.4
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	96.39
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	96.39
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.38
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	96.37
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	96.37
1xj5_A	334	Spermidine synthase 1; structural genomics, protei	96.37
3c3y_A	237	Pfomt, O-methyltransferase; plant secondary metabo	96.36
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	96.35
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	96.35
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.35
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	96.35
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	96.34
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	96.34
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	96.34
1xq1_A	266	Putative tropinone reducatse; structural genomics,	96.34
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	96.32
3duw_A	223	OMT, O-methyltransferase, putative; alternating of	96.32
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	96.32
3evz_A	230	Methyltransferase; NYSGXRC, NEW YORK SGX research	96.32
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	96.32
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	96.31
4had_A	350	Probable oxidoreductase protein; structural genomi	96.31
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	96.31
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	96.31
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	96.3
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	96.3
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	96.3
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	96.3
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	96.3
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	96.29
2b2c_A	314	Spermidine synthase; beta-alpha, transferase; 2.50	96.29
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	96.29
1id1_A	153	Putative potassium channel protein; RCK domain, E.	96.29
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	96.29
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	96.29
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	96.29
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	96.28
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	96.28
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	96.28
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	96.27
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	96.27
4hkt_A	331	Inositol 2-dehydrogenase; structural genomics, nys	96.27
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	96.26
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	96.26
3db2_A	354	Putative NADPH-dependent oxidoreductase; two domai	96.25
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	96.24
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	96.24
3q2i_A	354	Dehydrogenase; rossmann fold, UDP-sugar binding, N	96.23
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	96.23
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	96.23
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	96.22
3rc1_A	350	Sugar 3-ketoreductase; sugar biosynthesis, TDP bin	96.22
3dli_A	240	Methyltransferase; PSI-II, NYSGXRC, structural gen	96.21
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	96.2
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	96.2
3ezy_A	344	Dehydrogenase; structural genomics, unknown functi	96.17
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	96.17
4fb5_A	393	Probable oxidoreductase protein; PSI-biology, nysg	96.17
3euw_A	344	MYO-inositol dehydrogenase; protein structure init	96.17
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	96.16
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	96.15
3bwc_A	304	Spermidine synthase; SAM, SGPP, structura genomics	96.15
1ej0_A	180	FTSJ; methyltransferase, adoMet, adenosyl methioni	96.14
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	96.14
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	96.14
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	96.14
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	96.14
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	96.14
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	96.12
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	96.12
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.1
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	96.1
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	96.09
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	96.08
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	96.08
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	96.07
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	96.06
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	96.06
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	96.05
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	96.04
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	96.04
3m33_A	226	Uncharacterized protein; structural genomics, PSI-	96.04
1xq6_A	253	Unknown protein; structural genomics, protein stru	96.03
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.02
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	96.02
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	96.01
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	96.01
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	96.01
4gqa_A	412	NAD binding oxidoreductase; structural genomics, P	96.0
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	95.99
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	95.98
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	95.98
3gjy_A	317	Spermidine synthase; APC62791, structural genomics	95.97
2i7c_A	283	Spermidine synthase; transferase, structural genom	95.97
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	95.96
1iy9_A	275	Spermidine synthase; rossmann fold, structural gen	95.95
3adn_A	294	Spermidine synthase; aminopropyltransferase, polya	95.95
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	95.94
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	95.92
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	95.92
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	95.92
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	95.91
2o07_A	304	Spermidine synthase; structural genomics, structur	95.91
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	95.9
1vl5_A	260	Unknown conserved protein BH2331; putative methylt	95.89
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	95.89
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	95.88
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	95.88
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	95.88
3m4x_A	456	NOL1/NOP2/SUN family protein; mtase domain, PUA do	95.87
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	95.86
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	95.85
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	95.84
1zh8_A	340	Oxidoreductase; TM0312, structural genomics, JO ce	95.84
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	95.84
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	95.83
3g89_A	249	Ribosomal RNA small subunit methyltransferase G; 1	95.83
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	95.83
1ixk_A	315	Methyltransferase; open beta sheet; 1.90A {Pyrococ	95.82
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	95.82
2ho3_A	325	Oxidoreductase, GFO/IDH/MOCA family; streptococcus	95.82
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	95.81
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	95.8
1inl_A	296	Spermidine synthase; beta-barrel, rossman fold, st	95.8
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	95.79
3ajd_A	274	Putative methyltransferase MJ0026; tRNA, M5C, ross	95.78
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	95.78
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	95.75
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	95.75
4dmg_A	393	Putative uncharacterized protein TTHA1493; rRNA, m	95.74
3m6w_A	464	RRNA methylase; rRNA methyltransferase, 5-methylcy	95.73
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	95.73
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	95.73
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	95.71
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	95.71
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	95.7
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.7
3lpm_A	259	Putative methyltransferase; structural genomics, p	95.7
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	95.7
2o57_A	297	Putative sarcosine dimethylglycine methyltransfera	95.69
2cvz_A	289	Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase;	95.69
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	95.69
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	95.69
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	95.68
2pxx_A	215	Uncharacterized protein MGC2408; structural genomi	95.67
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	95.67
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	95.67
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	95.66
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	95.64
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	95.63
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	95.63
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	95.62
3f4k_A	257	Putative methyltransferase; structural genomics, P	95.61
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	95.6
3bus_A	273	REBM, methyltransferase; rebeccamycin synthesis; H	95.6
3ohs_X	334	Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; d	95.59
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	95.59
3g07_A	292	7SK snRNA methylphosphate capping enzyme; structur	95.58
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	95.58
3o9z_A	312	Lipopolysaccaride biosynthesis protein WBPB; oxido	95.58
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	95.58
2pt6_A	321	Spermidine synthase; transferase, structural genom	95.58
3e82_A	364	Putative oxidoreductase; NAD, GFO/IDH/MOCA family,	95.57
3e9m_A	330	Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA,	95.57
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	95.57
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	95.57
3uwp_A	438	Histone-lysine N-methyltransferase, H3 lysine-79;	95.57
4gek_A	261	TRNA (CMO5U34)-methyltransferase; structural genom	95.56
3bkw_A	243	MLL3908 protein, S-adenosylmethionine dependent me	95.56
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	95.56
1zx0_A	236	Guanidinoacetate N-methyltransferase; structural g	95.53
1sqg_A	429	SUN protein, FMU protein; rossmann-fold, mixed bet	95.53
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	95.53
3sm3_A	235	SAM-dependent methyltransferases; NESG, structural	95.51
3iv6_A	261	Putative Zn-dependent alcohol dehydrogenase; alpha	95.51
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	95.51
3evn_A	329	Oxidoreductase, GFO/IDH/MOCA family; structural ge	95.51
3l07_A	285	Bifunctional protein fold; structural genomics, ID	95.5
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	95.5
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	95.49
1xea_A	323	Oxidoreductase, GFO/IDH/MOCA family; structural ge	95.48
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	95.47
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	95.47
1dus_A	194	MJ0882; hypothetical protein, methanococcus jannas	95.46
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	95.46
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	95.45
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	95.44
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	95.42
4h3v_A	390	Oxidoreductase domain protein; structural genomics	95.4
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	95.39
2p35_A	259	Trans-aconitate 2-methyltransferase; SAM dependent	95.39
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	95.38
3qha_A	296	Putative oxidoreductase; seattle structural genomi	95.38
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	95.37
2ozv_A	260	Hypothetical protein ATU0636; structural genomics,	95.36
3v5n_A	417	Oxidoreductase; structural genomics, PSI-biology,	95.33
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	95.32
1g8a_A	227	Fibrillarin-like PRE-rRNA processing protein; rRNA	95.32
2gf2_A	296	Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct	95.32
3dxy_A	218	TRNA (guanine-N(7)-)-methyltransferase; rossmann f	95.32
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	95.31
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	95.3
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	95.28
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	95.28
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	95.27
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	95.26

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=8.4e-61  Score=457.93  Aligned_cols=340  Identities=58%  Similarity=1.019  Sum_probs=308.1

Q ss_pred             ccccceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCC
Q 018072            6 GLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSD   85 (361)
Q Consensus         6 ~~~~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~   85 (361)
                      .+|++|||+++.+++++++++++|.|+|+++||||||+++|||++|++++.|..+..++|.++|||++|+|+++|++|++
T Consensus         4 ~~~~tmkA~v~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~v~~   83 (378)
T 3uko_A            4 GQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE   83 (378)
T ss_dssp             TSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEECTTCCS
T ss_pred             ccceeeEEEEEecCCCccEEEEecCCCCCCCeEEEEEEEeecCHHHHHHhcCCCCCCCCCccCCccceEEEEEeCCCCCc
Confidence            45899999999999988999999999999999999999999999999999998776788999999999999999999999


Q ss_pred             CCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECC
Q 018072           86 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN  165 (361)
Q Consensus        86 ~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP  165 (361)
                      |++||||++.+..+|+.|++|++|++++|.+.......|+...+|..++..+|.++.+..+.|+|+||+++|++.++++|
T Consensus        84 ~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP  163 (378)
T 3uko_A           84 VQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKID  163 (378)
T ss_dssp             CCTTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECC
T ss_pred             CCCCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEeEEEechhheEECC
Confidence            99999999999999999999999999999987664334655567777788888877778888999999999999999999


Q ss_pred             CCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEE
Q 018072          166 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV  245 (361)
Q Consensus       166 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv  245 (361)
                      +++++++||++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+++|+.+|++++++++|+++++++|+++++
T Consensus       164 ~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi  243 (378)
T 3uko_A          164 PTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFV  243 (378)
T ss_dssp             TTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEE
T ss_pred             CCCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEE
Confidence            99999999999999999999988889999999999999999999999999999998899999999999999999999999


Q ss_pred             cCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcC-CCcEEEEEcCCCCCceeecChhhhccccEEEEeeec
Q 018072          246 NTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHD-GWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFG  324 (361)
Q Consensus       246 ~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~-~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~  324 (361)
                      ++.+.+.++.+.+++++++++|+|||++|+++.+..+++++++ + |+++.+|.......+++++..+++++++.|++++
T Consensus       244 ~~~~~~~~~~~~i~~~~~gg~D~vid~~g~~~~~~~~~~~l~~g~-G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~  322 (378)
T 3uko_A          244 NPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGW-GTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFG  322 (378)
T ss_dssp             CGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTT-CEEEECSCCCTTCCEEECTHHHHTTCEEEECSGG
T ss_pred             ccccCchhHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHhhccC-CEEEEEcccCCCCccccCHHHHhcCcEEEEEEec
Confidence            9874333488999999888999999999998899999999999 5 9999999876556667766666679999999887


Q ss_pred             CCCcCCcHHHHHHHHHcCCccc
Q 018072          325 NYKPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~l~~  346 (361)
                      .+..++++++++++++++++++
T Consensus       323 ~~~~~~~~~~~~~l~~~g~l~~  344 (378)
T 3uko_A          323 GFKSRTQVPWLVEKYMNKEIKV  344 (378)
T ss_dssp             GCCHHHHHHHHHHHHHTTSSCC
T ss_pred             CCCchHHHHHHHHHHHcCCCCh
Confidence            7666778999999999998864

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=1.9e-57  Score=433.92  Aligned_cols=339  Identities=47%  Similarity=0.821  Sum_probs=283.8

Q ss_pred             CCCccccccceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeC
Q 018072            1 MSSTAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVG   80 (361)
Q Consensus         1 m~~~~~~~~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G   80 (361)
                      |+ +.+.|++|||+++.+++++++++++|.|+|+++||||||+++|||++|++++.|..+ ..+|.++|||++|+|+++|
T Consensus         1 ~~-~~~~p~~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~P~v~GhE~~G~V~~vG   78 (373)
T 1p0f_A            1 MC-TAGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIP-SKFPVILGHEAVGVVESIG   78 (373)
T ss_dssp             -C-CTTSCEEEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCCEEEEEEEEC
T ss_pred             Cc-ccCCcceeEEEEEEcCCCCeeEEEeeCCCCCCCeEEEEEeEEeecchhHHHhcCCCC-CCCCcccCcCceEEEEEEC
Confidence            66 456899999999999987799999999999999999999999999999999988655 5679999999999999999


Q ss_pred             CCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccc
Q 018072           81 EGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGC  160 (361)
Q Consensus        81 ~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~  160 (361)
                      ++|++|++||||++.+..+|+.|++|++|+++.|.+.......|.. .+|...+..+|.+..++...|+|+||+++|++.
T Consensus        79 ~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~  157 (373)
T 1p0f_A           79 AGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLM-ADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIA  157 (373)
T ss_dssp             TTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSC-TTSCCSEEETTEEEBCSTTTCCSBSEEEEETTS
T ss_pred             CCCCccCCCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccc-cCCccccccCCcccccccCCccceeEEEEchhh
Confidence            9999999999999999999999999999999999976432111211 111111112222222223347999999999999


Q ss_pred             eEECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcC
Q 018072          161 VAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG  240 (361)
Q Consensus       161 ~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G  240 (361)
                      ++++|++++++ ||++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+++|+.+|++++++++|+++++++|
T Consensus       158 ~~~iP~~l~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lG  236 (373)
T 1p0f_A          158 VAKIDPKAPLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELG  236 (373)
T ss_dssp             EEEECTTCCGG-GGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTT
T ss_pred             EEECCCCCChh-hhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcC
Confidence            99999999999 99999999999999888899999999999999999999999999999878999999999999999999


Q ss_pred             CCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCC-cEEEEEcCCCCCceeecChhhhc-cccEE
Q 018072          241 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGW-GVAVLVGVPSKDAVFMTKPINVL-NERTL  318 (361)
Q Consensus       241 ~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~-G~iv~~g~~~~~~~~~~~~~~~~-~~~~l  318 (361)
                      +++++++.+.+.++.+.+++++++++|+|||++|+++.+..+++++++ + |+++.+|.........+++..++ ++ ++
T Consensus       237 a~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i  314 (373)
T 1p0f_A          237 ATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYC-GSGVTVVLGLASPNERLPLDPLLLLTGR-SL  314 (373)
T ss_dssp             CSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCT-TTCEEEECCCCCTTCCEEECTHHHHTTC-EE
T ss_pred             CcEEEecccccchHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHhc-CCCEEEEEccCCCCCccccCHHHhccCc-eE
Confidence            999998875222488888888877999999999998899999999998 6 99999997654334555555444 67 99


Q ss_pred             EEeeecCCCcCCcHHHHHHHHHcCCccc
Q 018072          319 KGTFFGNYKPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       319 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~  346 (361)
                      .|++.+.+. .++++++++++++|++++
T Consensus       315 ~g~~~~~~~-~~~~~~~~~l~~~g~i~~  341 (373)
T 1p0f_A          315 KGSVFGGFK-GEEVSRLVDDYMKKKINV  341 (373)
T ss_dssp             EECSGGGCC-GGGHHHHHHHHHTTSSCG
T ss_pred             EeeccCCcC-HHHHHHHHHHHHcCCCCc
Confidence            998765442 378999999999999864

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=6.6e-57  Score=430.37  Aligned_cols=338  Identities=49%  Similarity=0.870  Sum_probs=283.7

Q ss_pred             cccccceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCC
Q 018072            5 AGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVS   84 (361)
Q Consensus         5 ~~~~~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~   84 (361)
                      ...|++|||+++.+++++++++++|.|+|+++||||||.++|||++|++++.|..+.. +|.++|||++|+|+++|++|+
T Consensus         3 ~~~~~~mkA~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~P~v~GhE~~G~V~~vG~~v~   81 (374)
T 2jhf_A            3 AGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP-LPVIAGHEAAGIVESIGEGVT   81 (374)
T ss_dssp             TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCCC-SSBCCCCSEEEEEEEECTTCC
T ss_pred             CCCceeEEEEEEecCCCceEEEEccCCCCCCCeEEEEEeEEeechhhHHHHcCCCCCC-CCcccCcCceEEEEEECCCCC
Confidence            3468999999999998779999999999999999999999999999999998865533 799999999999999999999


Q ss_pred             CCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEEC
Q 018072           85 DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI  164 (361)
Q Consensus        85 ~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~i  164 (361)
                      +|++||||++.+..+|+.|++|++|++++|.+......+|.. .+|...+..+|.+..++...|+|+||+++|++.++++
T Consensus        82 ~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~i  160 (374)
T 2jhf_A           82 TVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKI  160 (374)
T ss_dssp             SCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSC-TTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEEC
T ss_pred             CCCCCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccc-cCCcccccccccccccccCCccCeeEEEEchHHeEEC
Confidence            999999999999999999999999999999986532111221 1121112222222222233479999999999999999


Q ss_pred             CCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEE
Q 018072          165 NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF  244 (361)
Q Consensus       165 P~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~v  244 (361)
                      |+++++++||++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+++|+.+|++++++++|+++++++|++++
T Consensus       161 P~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~v  240 (374)
T 2jhf_A          161 DAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATEC  240 (374)
T ss_dssp             CTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEE
T ss_pred             CCCCCHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceE
Confidence            99999999999999999999998888999999999999999999999999999998789999999999999999999999


Q ss_pred             EcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCC-cEEEEEcCCCCCceeecChhhhc-cccEEEEee
Q 018072          245 VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGW-GVAVLVGVPSKDAVFMTKPINVL-NERTLKGTF  322 (361)
Q Consensus       245 v~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~-G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~  322 (361)
                      +++.+.+.++.+.+++++++++|+|||++|.+..+..+++++++ + |+++.+|.......+.+++..++ ++ ++.|++
T Consensus       241 i~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~  318 (374)
T 2jhf_A          241 VNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQE-AYGVSVIVGVPPDSQNLSMNPMLLLSGR-TWKGAI  318 (374)
T ss_dssp             ECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCT-TTCEEEECSCCCTTCCEEECTHHHHTTC-EEEECS
T ss_pred             ecccccchhHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhc-CCcEEEEeccCCCCCccccCHHHHhcCC-eEEEec
Confidence            98775222388888888877999999999998899999999998 6 99999997664334455554444 77 999987


Q ss_pred             ecCCCcCCcHHHHHHHHHcCCccc
Q 018072          323 FGNYKPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~~l~~  346 (361)
                      .+.+...++++++++++++|++++
T Consensus       319 ~~~~~~~~~~~~~~~l~~~g~i~~  342 (374)
T 2jhf_A          319 FGGFKSKDSVPKLVADFMAKKFAL  342 (374)
T ss_dssp             GGGCCHHHHHHHHHHHHHTTSSCC
T ss_pred             cCCCChHHHHHHHHHHHHcCCCCc
Confidence            665444568999999999999865

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=4.4e-57  Score=431.47  Aligned_cols=337  Identities=52%  Similarity=0.915  Sum_probs=283.6

Q ss_pred             cccceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCC
Q 018072            7 LILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDL   86 (361)
Q Consensus         7 ~~~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~   86 (361)
                      +|++|||+++.+++++++++++|.|+|+++||||||+++|||++|++++.|..+...+|.++|||++|+|+++|++|++|
T Consensus         3 ~p~~mkA~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~~   82 (373)
T 2fzw_A            3 EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTKL   82 (373)
T ss_dssp             CCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTCCSSBCCCCEEEEEEEEECTTCCSC
T ss_pred             CccceEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEEEEchhhHHHhcCCCCCCCCCccccccccEEEEEECCCCCCC
Confidence            58899999999998779999999999999999999999999999999998876555789999999999999999999999


Q ss_pred             CCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCC
Q 018072           87 EVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP  166 (361)
Q Consensus        87 ~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~  166 (361)
                      ++||||++.+..+|+.|++|++|+++.|.+......+|.. .+|...+..+|.+...+...|+|+||+++|++.++++|+
T Consensus        83 ~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~  161 (373)
T 2fzw_A           83 KAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDP  161 (373)
T ss_dssp             CTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCC-TTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCT
T ss_pred             CCCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccc-cCCcccccccccccccccCCccceeEEEEchhheEECCC
Confidence            9999999999999999999999999999875421000111 122111222222222233457999999999999999999


Q ss_pred             CCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEc
Q 018072          167 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  246 (361)
Q Consensus       167 ~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~  246 (361)
                      ++++++||++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|++++++
T Consensus       162 ~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~  241 (373)
T 2fzw_A          162 LAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECIN  241 (373)
T ss_dssp             TSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEEC
T ss_pred             CCCHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEec
Confidence            99999999999999999999888899999999999999999999999999999878999999999999999999999998


Q ss_pred             CCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCC-cEEEEEcCCCCCceeecChhhhc-cccEEEEeeec
Q 018072          247 TSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGW-GVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFG  324 (361)
Q Consensus       247 ~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~-G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~  324 (361)
                      +.+.+.++.+.+++++++++|+|||++|.+..+..+++++++ + |+++.+|.......+.+++..++ ++ ++.|++++
T Consensus       242 ~~~~~~~~~~~v~~~~~~g~D~vid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g~~~~  319 (373)
T 2fzw_A          242 PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHK-GWGVSVVVGVAASGEEIATRPFQLVTGR-TWKGTAFG  319 (373)
T ss_dssp             GGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCT-TTCEEEECSCCCTTCCEEECTHHHHTTC-EEEECSGG
T ss_pred             cccccccHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHhhcc-CCcEEEEEecCCCCceeeeCHHHHhcCC-EEEEeccC
Confidence            765222488888888877999999999998889999999998 6 99999997654334455554444 77 99998766


Q ss_pred             CCCcCCcHHHHHHHHHcCCccc
Q 018072          325 NYKPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~l~~  346 (361)
                      .+..+++++++++++++|++++
T Consensus       320 ~~~~~~~~~~~~~l~~~g~l~~  341 (373)
T 2fzw_A          320 GWKSVESVPKLVSEYMSKKIKV  341 (373)
T ss_dssp             GCCHHHHHHHHHHHHHTTSSCS
T ss_pred             CCCcHHHHHHHHHHHHcCCCCc
Confidence            5444568999999999999865

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=1.6e-56  Score=428.11  Aligned_cols=336  Identities=43%  Similarity=0.819  Sum_probs=280.2

Q ss_pred             cccccceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCC
Q 018072            5 AGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVS   84 (361)
Q Consensus         5 ~~~~~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~   84 (361)
                      ...|++|||+++.+++++++++++|.|+|+++||||||+++|||++|++++.|. +...+|.++|||++|+|+++|++|+
T Consensus         3 ~~~p~~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~-~~~~~P~v~GhE~~G~V~~vG~~v~   81 (376)
T 1e3i_A            3 QGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK-KKALFPVVLGHECAGIVESVGPGVT   81 (376)
T ss_dssp             TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTT-SCCCSSBCCCCEEEEEEEEECTTCC
T ss_pred             CCCChheeEEEEecCCCCeEEEEeeCCCCCCCeEEEEEeEEeEchhhHHHhcCC-CCCCCCcccCccccEEEEEECCCCc
Confidence            456899999999999867999999999999999999999999999999999886 4456899999999999999999999


Q ss_pred             CCCCCCEEeecCCCCCCCCccccCCCCCCCcccc----cCCcccccccCCCcccccCCCccccccCcccceeeEEEeccc
Q 018072           85 DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLR----INPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGC  160 (361)
Q Consensus        85 ~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~----~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~  160 (361)
                      +|++||||++.+..+|++|++|++|+++.|.+..    ...-.|.. .+|...+..+|.+..++...|+|+||+++|++.
T Consensus        82 ~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~  160 (376)
T 1e3i_A           82 NFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELM-EDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEAN  160 (376)
T ss_dssp             SCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSC-TTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGG
T ss_pred             cCCCCCEEEECCcCCCCCCccccCCCcccCcCcCcccccccccccc-ccCccccccCCcccccccCCccceeEEEecccc
Confidence            9999999999999999999999999999998754    10000111 111111111111111122346999999999999


Q ss_pred             eEECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcC
Q 018072          161 VAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG  240 (361)
Q Consensus       161 ~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G  240 (361)
                      ++++|+++++++||++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+++|+.+|++++++++|+++++++|
T Consensus       161 ~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lG  240 (376)
T 1e3i_A          161 LARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALG  240 (376)
T ss_dssp             EEECCTTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTT
T ss_pred             EEECCCCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhC
Confidence            99999999999999999999999999888899999999999999999999999999999878999999999999999999


Q ss_pred             CCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCC-cEEEEEcCCCCCceeecChhhhc-cccEE
Q 018072          241 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGW-GVAVLVGVPSKDAVFMTKPINVL-NERTL  318 (361)
Q Consensus       241 ~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~-G~iv~~g~~~~~~~~~~~~~~~~-~~~~l  318 (361)
                      +++++++.+.+.++.+.+++++++++|+|||++|++..+..+++++++ + |+++++|...  ....+++..++ ++ ++
T Consensus       241 a~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~-~~G~iv~~G~~~--~~~~~~~~~~~~~~-~i  316 (376)
T 1e3i_A          241 ATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVL-GWGSCTVVGAKV--DEMTIPTVDVILGR-SI  316 (376)
T ss_dssp             CSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCT-TTCEEEECCCSS--SEEEEEHHHHHTTC-EE
T ss_pred             CcEEEccccccchHHHHHHHHhCCCccEEEECCCCHHHHHHHHHHhhc-CCCEEEEECCCC--CccccCHHHhhccC-eE
Confidence            999998875222388888888877999999999998889999999998 6 9999999843  33445554444 77 99


Q ss_pred             EEeeecCCCcCCcHHHHHHHHHcCCccc
Q 018072          319 KGTFFGNYKPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       319 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~  346 (361)
                      .|++.+.+...++++++++++++|++++
T Consensus       317 ~g~~~~~~~~~~~~~~~~~l~~~g~i~~  344 (376)
T 1e3i_A          317 NGTFFGGWKSVDSVPNLVSDYKNKKFDL  344 (376)
T ss_dssp             EECSGGGCCHHHHHHHHHHHHHTTSSCG
T ss_pred             EEEecCCCCcHHHHHHHHHHHHcCCCCc
Confidence            9987665444568999999999999865

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.9e-56  Score=427.21  Aligned_cols=337  Identities=51%  Similarity=0.888  Sum_probs=282.5

Q ss_pred             cccccceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchh-ccccCCCCCCCCcccccceeEEEEEeCCCC
Q 018072            5 AGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLY-FWESKGQTPLFPRIFGHEAAGVVESVGEGV   83 (361)
Q Consensus         5 ~~~~~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~-~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v   83 (361)
                      ...|++|||+++.+++++++++++|.|+|+++||||||.++|||++|++ ++.|..+ ..+|.++|||++|+|+++|++|
T Consensus         3 ~~~~~~mka~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~~V   81 (374)
T 1cdo_A            3 VGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHK-DGFPVVLGHEGAGIVESVGPGV   81 (374)
T ss_dssp             TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCT-TSCSEECCCCEEEEEEEECTTC
T ss_pred             CCCcceeEEEEEecCCCCeEEEEeeCCCCCCCEEEEEEeEEeechhhHHHHhCCCCC-CCCCcccCccceEEEEEECCCC
Confidence            3468899999999998779999999999999999999999999999999 8888655 5689999999999999999999


Q ss_pred             CCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEE
Q 018072           84 SDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAK  163 (361)
Q Consensus        84 ~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~  163 (361)
                      ++|++||||++.+..+|+.|++|++|+++.|.+......+|.. .+|...+..+|.+...+...|+|+||+++|++.+++
T Consensus        82 ~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~  160 (374)
T 1cdo_A           82 TEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVM-SPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAK  160 (374)
T ss_dssp             CSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTT-SCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEE
T ss_pred             ccCCCCCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccc-cCCccccccCCcccccccCCccceeEEEEchhheEE
Confidence            9999999999999999999999999999999876432111221 112111222222112222346999999999999999


Q ss_pred             CCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCE
Q 018072          164 INPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD  243 (361)
Q Consensus       164 iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~  243 (361)
                      +|+++++++||++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|+++
T Consensus       161 ~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~  240 (374)
T 1cdo_A          161 IDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATD  240 (374)
T ss_dssp             CCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCE
T ss_pred             CCCCCCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCce
Confidence            99999999999999999999999888899999999999999999999999999999878999999999999999999999


Q ss_pred             EEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCC-cEEEEEcCCCCCceeecChhhhc-cccEEEEe
Q 018072          244 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGW-GVAVLVGVPSKDAVFMTKPINVL-NERTLKGT  321 (361)
Q Consensus       244 vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~-G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~  321 (361)
                      ++++.+.+.++.+.+++++++++|+|||++|.+..+..+++++++ + |+++.+|.... ..+.+++..++ ++ ++.|+
T Consensus       241 vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~-~~G~iv~~G~~~~-~~~~~~~~~~~~~~-~i~g~  317 (374)
T 1cdo_A          241 FVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLK-GWGVSVLVGWTDL-HDVATRPIQLIAGR-TWKGS  317 (374)
T ss_dssp             EECGGGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCT-TTCEEEECSCCSS-SCEEECHHHHHTTC-EEEEC
T ss_pred             EEeccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhc-CCcEEEEEcCCCC-CCcccCHHHHhcCC-eEEEE
Confidence            998875222488888888877999999999998889999999998 6 99999998653 33445554444 77 99998


Q ss_pred             eecCCCcCCcHHHHHHHHHcCCccc
Q 018072          322 FFGNYKPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~l~~  346 (361)
                      +.+.+...++++++++++++|++++
T Consensus       318 ~~~~~~~~~~~~~~~~l~~~g~l~~  342 (374)
T 1cdo_A          318 MFGGFKGKDGVPKMVKAYLDKKVKL  342 (374)
T ss_dssp             SGGGCCHHHHHHHHHHHHHTTSSCC
T ss_pred             ecCCCCcHHHHHHHHHHHHcCCCCh
Confidence            7665444568999999999999864

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.1e-56  Score=428.53  Aligned_cols=334  Identities=31%  Similarity=0.532  Sum_probs=279.3

Q ss_pred             ccceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 018072            8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLE   87 (361)
Q Consensus         8 ~~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~   87 (361)
                      |++|||+++.+++.+++++++|.|+|+++||||||.++|||++|++++.|..+ ..+|.++|||++|+|+++|++|++|+
T Consensus         4 ~~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~~v~~~~   82 (371)
T 1f8f_A            4 LKDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP-VPLPAVLGHEGSGIIEAIGPNVTELQ   82 (371)
T ss_dssp             CEEEEEEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             cccceEEEEcCCCCCeEEEEecCCCCCCCEEEEEEEEeecCchhHHHHcCCCC-CCCCcccCcccceEEEEeCCCCCCCC
Confidence            57899999999986799999999999999999999999999999999988654 45799999999999999999999999


Q ss_pred             CCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccc-cCCCcc-ccccCcccceeeEEEeccceEECC
Q 018072           88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFS-INGEPV-NHFLGTSTFSEYTVVHSGCVAKIN  165 (361)
Q Consensus        88 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~-~~g~~~-~~~~~~G~~ae~v~v~~~~~~~iP  165 (361)
                      +||||++.+ .+|+.|++|++|++++|.+.......|.. .+|..++. .+|.+. .+....|+|+||+++|++.++++|
T Consensus        83 ~GdrV~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~-~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~~~~~~~iP  160 (371)
T 1f8f_A           83 VGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGAD-SEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVT  160 (371)
T ss_dssp             TTCEEEECC-CCCSSSHHHHTTCGGGCTTHHHHSSSSSC-SSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEEC
T ss_pred             CCCEEEecC-CCCCCChhhhCcCcccccccccccccccc-ccccccccccCCccccccccCCccccCeEEechhheEECC
Confidence            999999999 99999999999999999876522000100 11111110 011000 011234699999999999999999


Q ss_pred             CCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEE
Q 018072          166 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV  245 (361)
Q Consensus       166 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv  245 (361)
                      +++++++||.+++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|+++++
T Consensus       161 ~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi  240 (371)
T 1f8f_A          161 KDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVI  240 (371)
T ss_dssp             TTSCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEE
T ss_pred             CCCCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEEe
Confidence            99999999999999999999987889999999999999999999999999999997799999999999999999999999


Q ss_pred             cCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeec
Q 018072          246 NTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFG  324 (361)
Q Consensus       246 ~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~  324 (361)
                      ++.+.+  +.+.+++++++++|+|||++|.+..++.++++|+++ |+++.+|.........++...++ +++++.|++.+
T Consensus       241 ~~~~~~--~~~~~~~~~~gg~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~  317 (371)
T 1f8f_A          241 NSKTQD--PVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL-GKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEG  317 (371)
T ss_dssp             ETTTSC--HHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEE-EEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGG
T ss_pred             cCCccC--HHHHHHHhcCCCCcEEEECCCCHHHHHHHHHHHhcC-CEEEEeCCCCCCCccccCHHHHHhCCCEEEEeCCC
Confidence            987665  788888888779999999999988899999999998 99999998653333445544444 89999998876


Q ss_pred             CCCcCCcHHHHHHHHHcCCcccC
Q 018072          325 NYKPRTDLPSVVDMYMNKVIRFS  347 (361)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~l~~~  347 (361)
                      .+..+++++++++++++|++++.
T Consensus       318 ~~~~~~~~~~~~~l~~~g~l~~~  340 (371)
T 1f8f_A          318 SGSPKKFIPELVRLYQQGKFPFD  340 (371)
T ss_dssp             GSCHHHHHHHHHHHHHTTSCCGG
T ss_pred             CCchHHHHHHHHHHHHcCCCCcc
Confidence            54334678999999999998654

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=7.9e-56  Score=422.10  Aligned_cols=308  Identities=25%  Similarity=0.404  Sum_probs=275.5

Q ss_pred             ccccceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCC
Q 018072            6 GLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSD   85 (361)
Q Consensus         6 ~~~~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~   85 (361)
                      .+|.+|||+++.+++. ++++++|.|+|+++||||||.++|||++|++++.|.+ ...+|.++|||++|+|+++|+++++
T Consensus        19 ~~p~~mkA~v~~~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~-~~~~p~v~G~e~~G~V~~vG~~v~~   96 (370)
T 4ej6_A           19 YFQSMMKAVRLESVGN-ISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEF-PSTPPVTLGHEFCGIVVEAGSAVRD   96 (370)
T ss_dssp             --CCEEEEEEEEETTE-EEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTSS-CCCSSEECCCSEEEEEEEECTTCCS
T ss_pred             ccchheEEEEEecCCc-eEEEEccCCCCCCCeEEEEEEEEeecHHHHHHHcCCC-CCCCCeecCcceEEEEEEECCCCCC
Confidence            3789999999999986 9999999999999999999999999999999999875 3567999999999999999999999


Q ss_pred             CCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECC
Q 018072           86 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN  165 (361)
Q Consensus        86 ~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP  165 (361)
                      |++||+|++.+..+|+.|++|+.|+++.|.+....   |..                   ..|+|+||+++|++.++++|
T Consensus        97 ~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~---g~~-------------------~~G~~aey~~v~~~~~~~~P  154 (370)
T 4ej6_A           97 IAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAI---GIH-------------------RDGGFAEYVLVPRKQAFEIP  154 (370)
T ss_dssp             SCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEEB---TTT-------------------BCCSSBSEEEEEGGGEEEEC
T ss_pred             CCCCCEEEECCCCCCCCChHHhCcCcccCCCcccc---CCC-------------------CCCcceEEEEEchhhEEECC
Confidence            99999999999999999999999999999987655   332                   23499999999999999999


Q ss_pred             CCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEE
Q 018072          166 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV  245 (361)
Q Consensus       166 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv  245 (361)
                      +++++++|| +..++.|||+++ +.+++++|++|||+|+|++|++++|+|+++|+.+|++++++++|+++++++|+++++
T Consensus       155 ~~~~~~~aa-l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi  232 (370)
T 4ej6_A          155 LTLDPVHGA-FCEPLACCLHGV-DLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATV  232 (370)
T ss_dssp             TTSCTTGGG-GHHHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEE
T ss_pred             CCCCHHHHh-hhhHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEE
Confidence            999999998 555999999996 889999999999999999999999999999998999999999999999999999999


Q ss_pred             cCCCCCccHHHHHHH---HcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEe
Q 018072          246 NTSEHDRPIQEVIAE---MTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGT  321 (361)
Q Consensus       246 ~~~~~~~~~~~~i~~---~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~  321 (361)
                      ++.+.+  +.+.+++   ++++++|+|||++|+++.+..++++++++ |+++.+|.........++...++ +++++.|+
T Consensus       233 ~~~~~~--~~~~i~~~~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~-G~vv~~G~~~~~~~~~~~~~~~~~~~~~i~g~  309 (370)
T 4ej6_A          233 DPSAGD--VVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAG-GTVVILGVLPQGEKVEIEPFDILFRELRVLGS  309 (370)
T ss_dssp             CTTSSC--HHHHHHSTTSSSTTCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECSCCCTTCCCCCCHHHHHHTTCEEEEC
T ss_pred             CCCCcC--HHHHHHhhhhccCCCCCEEEECCCCHHHHHHHHHHhccC-CEEEEEeccCCCCccccCHHHHHhCCcEEEEe
Confidence            988766  8888887   66679999999999888999999999997 99999998765445555555555 99999998


Q ss_pred             eecCCCcCCcHHHHHHHHHcCCccc
Q 018072          322 FFGNYKPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~l~~  346 (361)
                      +.+.    .+++++++++++|++++
T Consensus       310 ~~~~----~~~~~~~~l~~~g~i~~  330 (370)
T 4ej6_A          310 FINP----FVHRRAADLVATGAIEI  330 (370)
T ss_dssp             CSCT----TCHHHHHHHHHTTCSCC
T ss_pred             ccCh----HHHHHHHHHHHcCCCCh
Confidence            7543    67999999999999854

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=9.7e-55  Score=410.23  Aligned_cols=304  Identities=28%  Similarity=0.466  Sum_probs=271.3

Q ss_pred             ceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCCCCCC
Q 018072           10 TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEV   88 (361)
Q Consensus        10 ~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~~~~~   88 (361)
                      +|||+++.+++++++++++|.|+|+++||||||.++|||++|++++.|..+. .++|.++|||++|+|+++|+++++|++
T Consensus         2 ~MkA~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~G~E~~G~V~~vG~~v~~~~v   81 (340)
T 3s2e_A            2 MMKAAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVSAVGSGVSRVKE   81 (340)
T ss_dssp             EEEEEEBCSTTSCCEEEEEECCCCCTTCEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECSSCCSCCT
T ss_pred             ceEEEEEecCCCCCEEEEccCCCCCCCeEEEEEEEeccCHHHHHHHcCCCCCCCCCCcccCCcceEEEEEECCCCCcCCC
Confidence            5999999998878999999999999999999999999999999999987664 568999999999999999999999999


Q ss_pred             CCEE-eecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072           89 GDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  167 (361)
Q Consensus        89 Gd~V-~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~  167 (361)
                      |||| +..+..+|+.|++|++|+++.|.+....   |..                   ..|+|+||+++|++.++++|++
T Consensus        82 GdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~~---g~~-------------------~~G~~aey~~v~~~~~~~iP~~  139 (340)
T 3s2e_A           82 GDRVGVPWLYSACGYCEHCLQGWETLCEKQQNT---GYS-------------------VNGGYGEYVVADPNYVGLLPDK  139 (340)
T ss_dssp             TCEEEEESEEECCSSSHHHHTTCGGGCTTCEEB---TTT-------------------BCCSSBSEEEECTTTSEECCTT
T ss_pred             CCEEEecCCCCCCCCChHHhCcCcccCcccccc---CCC-------------------CCCcceeEEEechHHEEECCCC
Confidence            9999 4677889999999999999999987654   322                   2348999999999999999999


Q ss_pred             CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcC
Q 018072          168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  247 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~  247 (361)
                      +++++||.+++++.|||+++ +..++++|++|||+|+|++|++++|+|+.+|+ +|++++++++|+++++++|+++++++
T Consensus       140 ~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~i~~  217 (340)
T 3s2e_A          140 VGFVEIAPILCAGVTVYKGL-KVTDTRPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGAEVAVNA  217 (340)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HTTTCCTTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEET
T ss_pred             CCHHHhhcccchhHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCCEEEeC
Confidence            99999999999999999996 77899999999999999999999999999999 99999999999999999999999998


Q ss_pred             CCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeecCC
Q 018072          248 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNY  326 (361)
Q Consensus       248 ~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~~~  326 (361)
                      .+.+  +.+.+++. .+++|++||++|+++.++.++++++++ |+++.+|.....  ..++...++ +++++.|++.+. 
T Consensus       218 ~~~~--~~~~~~~~-~g~~d~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~~~~~i~g~~~~~-  290 (340)
T 3s2e_A          218 RDTD--PAAWLQKE-IGGAHGVLVTAVSPKAFSQAIGMVRRG-GTIALNGLPPGD--FGTPIFDVVLKGITIRGSIVGT-  290 (340)
T ss_dssp             TTSC--HHHHHHHH-HSSEEEEEESSCCHHHHHHHHHHEEEE-EEEEECSCCSSE--EEEEHHHHHHTTCEEEECCSCC-
T ss_pred             CCcC--HHHHHHHh-CCCCCEEEEeCCCHHHHHHHHHHhccC-CEEEEeCCCCCC--CCCCHHHHHhCCeEEEEEecCC-
Confidence            8766  77778774 348999999999989999999999998 999999987633  334444444 999999987654 


Q ss_pred             CcCCcHHHHHHHHHcCCccc
Q 018072          327 KPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       327 ~~~~~~~~~~~~~~~~~l~~  346 (361)
                        +++++++++++++|++++
T Consensus       291 --~~~~~~~~~l~~~g~l~~  308 (340)
T 3s2e_A          291 --RSDLQESLDFAAHGDVKA  308 (340)
T ss_dssp             --HHHHHHHHHHHHTTSCCC
T ss_pred             --HHHHHHHHHHHHhCCCCc
Confidence              478999999999999854

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=6.6e-54  Score=405.32  Aligned_cols=310  Identities=23%  Similarity=0.354  Sum_probs=269.3

Q ss_pred             eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC--CCCCcccccceeEEEEEeCCCCCCCCC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT--PLFPRIFGHEAAGVVESVGEGVSDLEV   88 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~--~~~p~~~G~e~~G~V~~~G~~v~~~~~   88 (361)
                      |||+++.+++++++++++|.|+|+++||||||.++|||++|++++.|..+.  .++|.++|||++|+|+++|+++++|++
T Consensus         1 MkA~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~v   80 (345)
T 3jv7_A            1 MKAVQYTEIGSEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGV   80 (345)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTTCCSCSSEECCSEEEEEEEEECTTCCSCCT
T ss_pred             CeEEEEcCCCCceEEEEecCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCccCCCCCcccCcccEEEEEEECCCCCCCCC
Confidence            899999999988999999999999999999999999999999999886542  468999999999999999999999999


Q ss_pred             CCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEe-ccceEECCCC
Q 018072           89 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVH-SGCVAKINPL  167 (361)
Q Consensus        89 Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~-~~~~~~iP~~  167 (361)
                      ||+|++.+..+|+.|++|+++++++|......   |.. .   .+          ....|+|+||+++| ++.++++|+ 
T Consensus        81 GdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~---~~~-~---~g----------~~~~G~~aey~~v~~~~~~~~~p~-  142 (345)
T 3jv7_A           81 GDAVAVYGPWGCGACHACARGRENYCTRAADL---GIT-P---PG----------LGSPGSMAEYMIVDSARHLVPIGD-  142 (345)
T ss_dssp             TCEEEECCSCCCSSSHHHHTTCGGGCSSHHHH---TCC-C---BT----------TTBCCSSBSEEEESCGGGEEECTT-
T ss_pred             CCEEEEecCCCCCCChHHHCcCcCcCcccccc---ccc-c---CC----------cCCCceeeEEEEecchhceEeCCC-
Confidence            99999999999999999999999999432211   100 0   00          11235999999999 999999999 


Q ss_pred             CChhhhhccccchhhhhhhhhh-hcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEc
Q 018072          168 APLDKVCILSCGVSTGLGATLN-VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  246 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~~-~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~  246 (361)
                      +++++||.+++++.|||+++.+ ...+++|++|||+|+|++|++++|+|+++|..+|++++++++|+++++++|++++++
T Consensus       143 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~  222 (345)
T 3jv7_A          143 LDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVK  222 (345)
T ss_dssp             CCHHHHGGGGTTTHHHHHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEE
T ss_pred             CCHHHhhhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEc
Confidence            9999999999999999999766 458999999999999999999999999995559999999999999999999999998


Q ss_pred             CCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecC
Q 018072          247 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN  325 (361)
Q Consensus       247 ~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~  325 (361)
                      +.+ +  +.+.+++++++ ++|+|||++|++..++.++++|+++ |+++.+|..... ...++...+.+++++.|++.+.
T Consensus       223 ~~~-~--~~~~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~~~i~g~~~~~  297 (345)
T 3jv7_A          223 SGA-G--AADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVD-GHISVVGIHAGA-HAKVGFFMIPFGASVVTPYWGT  297 (345)
T ss_dssp             CST-T--HHHHHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEE-EEEEECSCCTTC-CEEESTTTSCTTCEEECCCSCC
T ss_pred             CCC-c--HHHHHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcC-CEEEEECCCCCC-CCCcCHHHHhCCCEEEEEecCC
Confidence            865 3  88889998887 9999999999977999999999998 999999987642 2333333344999999987654


Q ss_pred             CCcCCcHHHHHHHHHcCCccc
Q 018072          326 YKPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~l~~  346 (361)
                         .++++++++++++|++++
T Consensus       298 ---~~~~~~~~~l~~~g~l~~  315 (345)
T 3jv7_A          298 ---RSELMEVVALARAGRLDI  315 (345)
T ss_dssp             ---HHHHHHHHHHHHTTCCCC
T ss_pred             ---HHHHHHHHHHHHcCCCce
Confidence               478999999999999865

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=1.4e-53  Score=403.21  Aligned_cols=308  Identities=24%  Similarity=0.353  Sum_probs=270.2

Q ss_pred             eeEEEeecCCCCeEEEEeecCC-CCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAP-PQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~-~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~G   89 (361)
                      |||+++.++|. ++++|+|+|+ +++|||||||.++|||++|++.+.+..+ ..+|+++|||++|+|+++|++|+++++|
T Consensus         1 MkAvv~~~~g~-l~v~e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~~~-~~~P~i~G~E~~G~V~~vG~~V~~~~~G   78 (346)
T 4a2c_A            1 MKSVVNDTDGI-VRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGA-HYYPITLGHEFSGYIDAVGSGVDDLHPG   78 (346)
T ss_dssp             CEEEEECSSSC-EEEEECCCCCCCSTTEEEEEEEEEECCTTHHHHHHSSCS-SSSSBCCCCEEEEEEEEECTTCCSCCTT
T ss_pred             CCEEEEecCCC-EEEEEEeCCCCCCcCEEEEEEEEEEECHHHHHHHcCCCC-CCCCccccEEEEEEEEEECCCcccccCC
Confidence            89999999997 9999999998 5799999999999999999998888654 5689999999999999999999999999


Q ss_pred             CEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCC
Q 018072           90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP  169 (361)
Q Consensus        90 d~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~  169 (361)
                      |+|++.+...|+.|..|+.|+++.|.+....   |..                   ..|+|+||+++|++.++++|++++
T Consensus        79 drV~~~~~~~~g~c~~c~~g~~~~c~~~~~~---g~~-------------------~~G~~aey~~v~~~~~~~iP~~l~  136 (346)
T 4a2c_A           79 DAVACVPLLPCFTCPECLKGFYSQCAKYDFI---GSR-------------------RDGGFAEYIVVKRKNVFALPTDMP  136 (346)
T ss_dssp             CEEEECCEECCSCSHHHHTTCGGGCSSCEEB---TTT-------------------BCCSSBSEEEEEGGGEEECCTTSC
T ss_pred             CeEEeeeccCCCCcccccCCccccCCCcccc---cCC-------------------CCcccccccccchheEEECCCCCC
Confidence            9999999999999999999999999987665   322                   234999999999999999999999


Q ss_pred             hhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCC
Q 018072          170 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE  249 (361)
Q Consensus       170 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~  249 (361)
                      +++||+++ ++.+++++ .+..++++|++|||+|+|++|++++|+|+++|+..+++++++++|+++++++|+++++++.+
T Consensus       137 ~~~aa~l~-~~~~~~~~-~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~  214 (346)
T 4a2c_A          137 IEDGAFIE-PITVGLHA-FHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSE  214 (346)
T ss_dssp             GGGGGGHH-HHHHHHHH-HHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTT
T ss_pred             HHHHHhch-HHHHHHHH-HHHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCC
Confidence            99999886 55555554 68899999999999999999999999999999988899999999999999999999999988


Q ss_pred             CCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeec-Chhh-hccccEEEEeeecCC
Q 018072          250 HDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMT-KPIN-VLNERTLKGTFFGNY  326 (361)
Q Consensus       250 ~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~-~~~~-~~~~~~l~g~~~~~~  326 (361)
                      .+  +.+.++.++++ ++|+|+|++|++..++.++++++++ |+++++|.......+.. +... +.|++++.|++.+..
T Consensus       215 ~~--~~~~~~~~~~~~g~d~v~d~~G~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~~~~~~  291 (346)
T 4a2c_A          215 MS--APQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPH-AQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYS  291 (346)
T ss_dssp             SC--HHHHHHHHGGGCSSEEEEECSCSHHHHHHHHHHCCTT-CEEEECCCCSSCEEECHHHHHHHHHHTCEEEECCTTCC
T ss_pred             CC--HHHHHHhhcccCCcccccccccccchhhhhhheecCC-eEEEEEeccCCCccccccCHHHHhhceeEEEEEecccc
Confidence            76  77788888877 8999999999989999999999998 99999998775544432 2222 349999999876543


Q ss_pred             --CcCCcHHHHHHHHHcCCcccC
Q 018072          327 --KPRTDLPSVVDMYMNKVIRFS  347 (361)
Q Consensus       327 --~~~~~~~~~~~~~~~~~l~~~  347 (361)
                        ...++++++++++++|+++++
T Consensus       292 ~~~~~~~~~~~~~l~~~g~l~~~  314 (346)
T 4a2c_A          292 SPWPGQEWETASRLLTERKLSLE  314 (346)
T ss_dssp             SSTTCHHHHHHHHHHHTTCSCCG
T ss_pred             CcchHHHHHHHHHHHHcCCCCCC
Confidence              235679999999999998654

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=4.9e-54  Score=406.64  Aligned_cols=308  Identities=27%  Similarity=0.359  Sum_probs=257.8

Q ss_pred             ccceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhcccc-CCC--CCCCCcccccceeEEEEEeCCCCC
Q 018072            8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWES-KGQ--TPLFPRIFGHEAAGVVESVGEGVS   84 (361)
Q Consensus         8 ~~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g-~~~--~~~~p~~~G~e~~G~V~~~G~~v~   84 (361)
                      |++|||+++.+++..++++++|.|+|+++||||||.++|||++|++++.| .++  ...+|.++|||++|+|+++|++|+
T Consensus         2 m~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~   81 (348)
T 2d8a_A            2 SEKMVAIMKTKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPGVE   81 (348)
T ss_dssp             -CEEEEEEECSSSSSCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCTTHHHHCCSSEECCCEEEEEEEEECTTCC
T ss_pred             CCcceEEEEECCCCCEEEEECCCCCCCcCEEEEEEeEEEecHHHHHHHcCCCCCcccCCCCCccCccceEEEEEECCCCC
Confidence            46799999999984499999999999999999999999999999999988 332  246799999999999999999999


Q ss_pred             CCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEEC
Q 018072           85 DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI  164 (361)
Q Consensus        85 ~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~i  164 (361)
                      +|++||||++.+..+|+.|++|++|++++|.+....   |..                   ..|+|+||+++|++.++++
T Consensus        82 ~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~---g~~-------------------~~G~~aey~~v~~~~~~~i  139 (348)
T 2d8a_A           82 GIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIF---GVD-------------------TDGVFAEYAVVPAQNIWKN  139 (348)
T ss_dssp             SCCTTCEEEECCEECCSCCC------------CEET---TTS-------------------SCCSSBSEEEEEGGGEEEC
T ss_pred             cCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCee---cCC-------------------CCCcCcceEEeChHHeEEC
Confidence            999999999999999999999999999999986544   321                   1248999999999999999


Q ss_pred             CCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEE
Q 018072          165 NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF  244 (361)
Q Consensus       165 P~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~v  244 (361)
                      |+++++++||+++ ++.|||+++ +.+++ +|++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++|++++
T Consensus       140 P~~~~~~~aa~~~-~~~ta~~~l-~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~  216 (348)
T 2d8a_A          140 PKSIPPEYATLQE-PLGNAVDTV-LAGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYV  216 (348)
T ss_dssp             CTTSCHHHHTTHH-HHHHHHHHH-TTSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEE
T ss_pred             CCCCCHHHHHhhh-HHHHHHHHH-HhcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEE
Confidence            9999999999886 888999997 77889 99999999999999999999999998789999999999999999999999


Q ss_pred             EcCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecCh-hhh-ccccEEEEe
Q 018072          245 VNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INV-LNERTLKGT  321 (361)
Q Consensus       245 v~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~-~~~~~l~g~  321 (361)
                      +++.+.+  +.+.+++++++ ++|+|||++|.+..+..++++++++ |+++.+|.....  ..++. ..+ .+++++.|+
T Consensus       217 ~~~~~~~--~~~~v~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~~--~~~~~~~~~~~~~~~i~g~  291 (348)
T 2d8a_A          217 INPFEED--VVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPA-GRVSLLGLYPGK--VTIDFNNLIIFKALTIYGI  291 (348)
T ss_dssp             ECTTTSC--HHHHHHHHTTTSCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECCCCSSC--CCCCHHHHTTTTTCEEEEC
T ss_pred             ECCCCcC--HHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEccCCCC--cccCchHHHHhCCcEEEEe
Confidence            9987655  88888888877 8999999999988999999999997 999999986543  33444 334 499999998


Q ss_pred             eecCCCcCCcHHHHHHHHHcCCcccC
Q 018072          322 FFGNYKPRTDLPSVVDMYMNKVIRFS  347 (361)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~l~~~  347 (361)
                      +.+..  +++++++++++++|++++.
T Consensus       292 ~~~~~--~~~~~~~~~l~~~g~i~~~  315 (348)
T 2d8a_A          292 TGRHL--WETWYTVSRLLQSGKLNLD  315 (348)
T ss_dssp             CCCCS--HHHHHHHHHHHHHTCCCCT
T ss_pred             cCCCc--HHHHHHHHHHHHcCCCChH
Confidence            65431  4679999999999997553

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=3.8e-54  Score=409.73  Aligned_cols=308  Identities=21%  Similarity=0.305  Sum_probs=267.7

Q ss_pred             cccceeEEEeecCCCCeEEEEeecC--------CCCCCeEEEEEeEEecCccchhccccCC---CCCCCCcccccceeEE
Q 018072            7 LILTCKAAVAWEAGKPLIIQDVEVA--------PPQAMEVRIKIKYTSLCRTDLYFWESKG---QTPLFPRIFGHEAAGV   75 (361)
Q Consensus         7 ~~~~m~a~~~~~~~~~~~~~~~~~p--------~~~~~evlVkv~~~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~   75 (361)
                      +|++|||+++.+++. ++++++|.|        +|+++||||||.++|||++|++++.+..   ...++|.++|||++|+
T Consensus         5 ~~~~mka~~~~~~~~-l~~~~~~~P~~~~~~~~~~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~p~v~G~E~~G~   83 (363)
T 3m6i_A            5 ASKTNIGVFTNPQHD-LWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGE   83 (363)
T ss_dssp             CCSCCEEEEECTTCC-EEEEECSSCHHHHHHTCSCCTTEEEEEEEEEECCHHHHHHHHHSBSSSCBCCSCEECCCEEEEE
T ss_pred             CcccceeEEEeCCCc-EEEEEecCCccccccCCCcCCCeEEEEEeEEeecHhhHHHHcCCCCCCccCCCCcccCcceEEE
Confidence            578999999999887 999999999        9999999999999999999999887432   1246799999999999


Q ss_pred             EEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEE
Q 018072           76 VESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTV  155 (361)
Q Consensus        76 V~~~G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~  155 (361)
                      |+++|+++++|++||||++.+..+|+.|++|++|+++.|.+..+.   |....                  .|+|+||++
T Consensus        84 V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~---g~~~~------------------~G~~aey~~  142 (363)
T 3m6i_A           84 VIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFL---STPPV------------------PGLLRRYVN  142 (363)
T ss_dssp             EEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEET---TSTTS------------------CCSCBSEEE
T ss_pred             EEEECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCcccc---CCCCC------------------CccceeEEE
Confidence            999999999999999999999999999999999999999987665   32211                  249999999


Q ss_pred             EeccceEECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHH
Q 018072          156 VHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE  235 (361)
Q Consensus       156 v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~  235 (361)
                      +|++.++++|+ +++++||++. ++.|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+++|++++++++|+++
T Consensus       143 v~~~~~~~iP~-~s~~~aa~~~-~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~  219 (363)
T 3m6i_A          143 HPAVWCHKIGN-MSYENGAMLE-PLSVALAGL-QRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKF  219 (363)
T ss_dssp             EEGGGEEECTT-CCHHHHHHHH-HHHHHHHHH-HHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHH
T ss_pred             EehhhEEECCC-CCHHHHHhhh-HHHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence            99999999999 9999999885 889999996 88999999999999999999999999999999669999999999999


Q ss_pred             HHHcCCCEEEcCCC---CCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhh
Q 018072          236 AKKFGVTDFVNTSE---HDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN  311 (361)
Q Consensus       236 ~~~~G~~~vv~~~~---~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~  311 (361)
                      ++++ ++.++++..   .+.++.+.+++++++ ++|+|||++|++..+..++++++++ |+++.+|.......+  +...
T Consensus       220 a~~l-~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~--~~~~  295 (363)
T 3m6i_A          220 AKEI-CPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFG-GKVFVIGVGKNEIQI--PFMR  295 (363)
T ss_dssp             HHHH-CTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECCCCCSCCCC--CHHH
T ss_pred             HHHh-chhcccccccccchHHHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEEccCCCCccc--cHHH
Confidence            9999 766555431   224588888898877 9999999999977899999999998 999999986644333  3333


Q ss_pred             h-ccccEEEEeeecCCCcCCcHHHHHHHHHcCCcccC
Q 018072          312 V-LNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRFS  347 (361)
Q Consensus       312 ~-~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l~~~  347 (361)
                      + ++++++.|++.+    .++++++++++++|++++.
T Consensus       296 ~~~~~~~i~g~~~~----~~~~~~~~~l~~~g~i~~~  328 (363)
T 3m6i_A          296 ASVREVDLQFQYRY----CNTWPRAIRLVENGLVDLT  328 (363)
T ss_dssp             HHHHTCEEEECCSC----SSCHHHHHHHHHTTSSCCG
T ss_pred             HHhcCcEEEEccCC----HHHHHHHHHHHHhCCCChH
Confidence            3 499999998754    5899999999999998543

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4.1e-54  Score=408.81  Aligned_cols=305  Identities=26%  Similarity=0.385  Sum_probs=264.1

Q ss_pred             cccceeEEEeecCCCCeEEEEeecCC-CCCCeEEEEEeEEecCccchhccccCCC---CCCCCcccccceeEEEEEeCCC
Q 018072            7 LILTCKAAVAWEAGKPLIIQDVEVAP-PQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESVGEG   82 (361)
Q Consensus         7 ~~~~m~a~~~~~~~~~~~~~~~~~p~-~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~~G~~   82 (361)
                      .|.+|||+++.+++.+++++++|.|+ |+++||||||.++|||++|++++.|.++   ...+|.++|||++|+|+++|++
T Consensus        12 ~~~~mka~~~~~~g~~l~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~   91 (359)
T 1h2b_A           12 GVERLKAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEG   91 (359)
T ss_dssp             -----CEEEESSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTT
T ss_pred             ChhhceEEEEecCCCCcEEEEccCCCCCCCCEEEEEEEEEEecccchHHHhCCCccccCCCCCeecCcCceEEEEEECCC
Confidence            47789999999998669999999999 9999999999999999999999988654   3468999999999999999999


Q ss_pred             CCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceE
Q 018072           83 VSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVA  162 (361)
Q Consensus        83 v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~  162 (361)
                      |++|++||||+..+..+|+.|++|++|++++|.+....   |..                   ..|+|+||+++|++.++
T Consensus        92 v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~---G~~-------------------~~G~~aey~~v~~~~~~  149 (359)
T 1h2b_A           92 VEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFP---GLN-------------------IDGGFAEFMRTSHRSVI  149 (359)
T ss_dssp             CCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCB---TTT-------------------BCCSSBSEEEECGGGEE
T ss_pred             CCCCCCCCEEEeCCCCCCCCChhhhCcCcccCCCcccc---ccC-------------------CCCcccceEEechHhEE
Confidence            99999999999999999999999999999999876543   321                   12489999999999999


Q ss_pred             ECCCCCChhhhh---ccccchhhhhhhhhhh-cCCCCCCEEEEEcCCHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHH
Q 018072          163 KINPLAPLDKVC---ILSCGVSTGLGATLNV-AKPERGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAK  237 (361)
Q Consensus       163 ~iP~~~~~~~aa---~l~~~~~ta~~a~~~~-~~~~~g~~VlI~G~g~vG~~a~~~a~~~-g~~~Vi~~~~~~~~~~~~~  237 (361)
                      ++|+++++++||   .+++++.|||+++.+. +++++|++|||+|+|++|++++|+|+++ |+ +|++++++++|+++++
T Consensus       150 ~iP~~~~~~~aa~~~~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga-~Vi~~~~~~~~~~~~~  228 (359)
T 1h2b_A          150 KLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPA-TVIALDVKEEKLKLAE  228 (359)
T ss_dssp             ECCTTCCHHHHHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCC-EEEEEESSHHHHHHHH
T ss_pred             ECCCCCCHHHHhhccchhhhHHHHHHHHHhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEEeCCHHHHHHHH
Confidence            999999999999   7888889999997555 8999999999999999999999999999 99 8999999999999999


Q ss_pred             HcCCCEEEcCCCCCccHHHHHHHHcCC-CccEEEEccCChH--HHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh-c
Q 018072          238 KFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNID--NMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-L  313 (361)
Q Consensus       238 ~~G~~~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~--~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~  313 (361)
                      ++|+++++++.+.   +.+.+++++++ ++|+|||++|++.  .+..++++  ++ |+++.+|.....   .++...+ .
T Consensus       229 ~lGa~~vi~~~~~---~~~~v~~~~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~-G~~v~~g~~~~~---~~~~~~~~~  299 (359)
T 1h2b_A          229 RLGADHVVDARRD---PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLG--RM-GRLIIVGYGGEL---RFPTIRVIS  299 (359)
T ss_dssp             HTTCSEEEETTSC---HHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEE--EE-EEEEECCCSSCC---CCCHHHHHH
T ss_pred             HhCCCEEEeccch---HHHHHHHHhCCCCCcEEEECCCCchHHHHHHHhhc--CC-CEEEEEeCCCCC---CCCHHHHHh
Confidence            9999999998753   67788888877 8999999999976  88888877  76 999999976533   3444334 4


Q ss_pred             cccEEEEeeecCCCcCCcHHHHHHHHHcCCccc
Q 018072          314 NERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       314 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l~~  346 (361)
                      +++++.|++.+.   .++++++++++++|+++.
T Consensus       300 ~~~~i~g~~~~~---~~~~~~~~~l~~~g~l~~  329 (359)
T 1h2b_A          300 SEVSFEGSLVGN---YVELHELVTLALQGKVRV  329 (359)
T ss_dssp             TTCEEEECCSCC---HHHHHHHHHHHHTTSCCC
T ss_pred             CCcEEEEecCCC---HHHHHHHHHHHHcCCCcc
Confidence            999999987544   478999999999999854

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=1.1e-53  Score=405.56  Aligned_cols=308  Identities=21%  Similarity=0.341  Sum_probs=265.9

Q ss_pred             ccceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCC-C--CCCCCcccccceeEEEEEeCCCCC
Q 018072            8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG-Q--TPLFPRIFGHEAAGVVESVGEGVS   84 (361)
Q Consensus         8 ~~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~-~--~~~~p~~~G~e~~G~V~~~G~~v~   84 (361)
                      +++|||+++.+++. ++++++|.|+|+++||||||.++|||++|++++.+.. .  ..++|.++|||++|+|+++|++|+
T Consensus         5 ~~~mka~~~~~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~V~   83 (356)
T 1pl8_A            5 KPNNLSLVVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVK   83 (356)
T ss_dssp             CCCCEEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCC
T ss_pred             ccCceEEEEecCCc-EEEEEccCCCCCCCeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEEEEEEECCCCC
Confidence            46799999999876 9999999999999999999999999999999887532 1  135799999999999999999999


Q ss_pred             CCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEEC
Q 018072           85 DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI  164 (361)
Q Consensus        85 ~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~i  164 (361)
                      +|++||||++.+..+|+.|++|+.|+++.|.+..+.   |....                  .|+|+||+++|++.++++
T Consensus        84 ~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~---g~~~~------------------~G~~aey~~v~~~~~~~i  142 (356)
T 1pl8_A           84 HLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFC---ATPPD------------------DGNLCRFYKHNAAFCYKL  142 (356)
T ss_dssp             SCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEET---TBTTB------------------CCSCBSEEEEEGGGEEEC
T ss_pred             CCCCCCEEEEeccCCCCCChHHHCcCcccCCCcccc---CcCCC------------------CCccccEEEeehHHEEEC
Confidence            999999999999999999999999999999987654   32111                  248999999999999999


Q ss_pred             CCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEE
Q 018072          165 NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF  244 (361)
Q Consensus       165 P~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~v  244 (361)
                      |+++++++||++ .++.|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|++++
T Consensus       143 P~~l~~~~aa~~-~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~v  220 (356)
T 1pl8_A          143 PDNVTFEEGALI-EPLSVGIHAC-RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLV  220 (356)
T ss_dssp             CTTSCHHHHHHH-HHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEE
T ss_pred             cCCCCHHHHHhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEE
Confidence            999999999876 4889999997 78899999999999999999999999999998889999999999999999999999


Q ss_pred             EcCCCCC-ccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh-ccccEEEEee
Q 018072          245 VNTSEHD-RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTF  322 (361)
Q Consensus       245 v~~~~~~-~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~l~g~~  322 (361)
                      +++...+ .++.+.+++.+++++|+|||++|++..+..++++|+++ |+++.+|.....  ..++...+ .+++++.|++
T Consensus       221 i~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~~~~~i~g~~  297 (356)
T 1pl8_A          221 LQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVGLGSEM--TTVPLLHAAIREVDIKGVF  297 (356)
T ss_dssp             EECSSCCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCCSC--CCCCHHHHHHTTCEEEECC
T ss_pred             EcCcccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhcCC-CEEEEEecCCCC--CccCHHHHHhcceEEEEec
Confidence            9886311 23677777777668999999999977899999999998 999999975433  33444333 4999999886


Q ss_pred             ecCCCcCCcHHHHHHHHHcCCccc
Q 018072          323 FGNYKPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~~l~~  346 (361)
                      ..    +++++++++++++|++++
T Consensus       298 ~~----~~~~~~~~~l~~~g~i~~  317 (356)
T 1pl8_A          298 RY----CNTWPVAISMLASKSVNV  317 (356)
T ss_dssp             SC----SSCHHHHHHHHHTTSCCC
T ss_pred             cc----HHHHHHHHHHHHcCCCCh
Confidence            43    478999999999999754

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=7.5e-54  Score=406.01  Aligned_cols=310  Identities=23%  Similarity=0.314  Sum_probs=271.7

Q ss_pred             eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchh-ccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLY-FWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~-~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~G   89 (361)
                      |||+++.++++ ++++++|.|+|+++||||||.++|||++|++ ++.|..+ .++|.++|||++|+|+++|+++++|++|
T Consensus         1 MkA~~~~~~~~-~~~~e~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~-~~~p~v~G~E~~G~V~~vG~~v~~~~vG   78 (352)
T 3fpc_A            1 MKGFAMLSIGK-VGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIG-ERHNMILGHEAVGEVVEVGSEVKDFKPG   78 (352)
T ss_dssp             CEEEEEEETTE-EEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTC-CCSSEECCCEEEEEEEEECTTCCSCCTT
T ss_pred             CeEEEEccCCC-ceEEeCCCCCCCCCeEEEEeCEEeEcccchHHHhCCCCC-CCCCcccCCcceEEEEEECCCCCcCCCC
Confidence            89999999998 9999999999999999999999999999999 5677554 4679999999999999999999999999


Q ss_pred             CEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEecc--ceEECCCC
Q 018072           90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CVAKINPL  167 (361)
Q Consensus        90 d~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~--~~~~iP~~  167 (361)
                      |||++.+..+|+.|.+|+.|+.++|.+......+|                   ....|+|+||+++|++  .++++|++
T Consensus        79 drV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~-------------------~~~~G~~aey~~v~~~~~~~~~iP~~  139 (352)
T 3fpc_A           79 DRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFS-------------------NVKDGVFGEFFHVNDADMNLAHLPKE  139 (352)
T ss_dssp             CEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBT-------------------TTBCCSSBSCEEESSHHHHCEECCTT
T ss_pred             CEEEEccccCCCCchhhcCCCcCCccccccccccc-------------------cCCCCcccceEEeccccCeEEECCCC
Confidence            99999999999999999999999997543211111                   1123599999999976  89999999


Q ss_pred             CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcC
Q 018072          168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  247 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~  247 (361)
                      +++++||++++++.|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|+++++++
T Consensus       140 ~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~  218 (352)
T 3fpc_A          140 IPLEAAVMIPDMMTTGFHGA-ELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINY  218 (352)
T ss_dssp             SCHHHHTTTTTHHHHHHHHH-HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECG
T ss_pred             CCHHHHhhccchhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcC
Confidence            99999999998999999996 88999999999999999999999999999999789999999999999999999999998


Q ss_pred             CCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh---ccccEEEEeee
Q 018072          248 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV---LNERTLKGTFF  323 (361)
Q Consensus       248 ~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~---~~~~~l~g~~~  323 (361)
                      .+.+  +.+.+++++++ ++|+|||++|+++.+..++++|+++ |+++.+|.......++++...+   ++++++.|++.
T Consensus       219 ~~~~--~~~~v~~~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~  295 (352)
T 3fpc_A          219 KNGD--IVEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPG-SDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLC  295 (352)
T ss_dssp             GGSC--HHHHHHHHTTTCCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCCSCSEEEEETTTTGGGTBCEEEEEBCC
T ss_pred             CCcC--HHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEecccCCCCceecchhHhhhhccccEEEEeec
Confidence            7766  88999999988 8999999999988999999999998 9999999876555555544332   38899998864


Q ss_pred             cCCCcCCcHHHHHHHHHcCCcccC
Q 018072          324 GNYKPRTDLPSVVDMYMNKVIRFS  347 (361)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~l~~~  347 (361)
                      ..  .+++++++++++++|++++.
T Consensus       296 ~~--~~~~~~~~~~l~~~g~i~~~  317 (352)
T 3fpc_A          296 PG--GRLRMERLIDLVFYKRVDPS  317 (352)
T ss_dssp             CC--HHHHHHHHHHHHHTTSCCGG
T ss_pred             cC--chhHHHHHHHHHHcCCCChh
Confidence            32  24679999999999998754

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.6e-53  Score=402.35  Aligned_cols=304  Identities=24%  Similarity=0.387  Sum_probs=262.5

Q ss_pred             cceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccC-CC--CCCCCcccccceeEEEEEeCCCCCC
Q 018072            9 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESK-GQ--TPLFPRIFGHEAAGVVESVGEGVSD   85 (361)
Q Consensus         9 ~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~-~~--~~~~p~~~G~e~~G~V~~~G~~v~~   85 (361)
                      ++|||+++.+++. ++++++|.|+|+++||||||.++|||++|++++.+. ..  ..++|.++|||++|+|+++|++|++
T Consensus         3 ~~mka~~~~~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~   81 (352)
T 1e3j_A            3 SDNLSAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKH   81 (352)
T ss_dssp             -CCEEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCS
T ss_pred             ccCEEEEEEcCCc-EEEEEecCCCCCCCeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccceEEEEEeCCCCCC
Confidence            4699999999876 999999999999999999999999999999988742 22  1357999999999999999999999


Q ss_pred             CCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECC
Q 018072           86 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN  165 (361)
Q Consensus        86 ~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP  165 (361)
                      |++||||++.+..+|+.|++|++|+++.|.+..+.   |....                  .|+|+||+++|++.++++|
T Consensus        82 ~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~---g~~~~------------------~G~~aey~~v~~~~~~~iP  140 (352)
T 1e3j_A           82 LKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFC---ATPPD------------------DGNLARYYVHAADFCHKLP  140 (352)
T ss_dssp             CCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEET---TBTTB------------------CCSCBSEEEEEGGGEEECC
T ss_pred             CCCCCEEEEcCcCCCCCChhhhCcCcccCCCCccc---CcCCC------------------CccceeEEEeChHHeEECc
Confidence            99999999999999999999999999999987654   32111                  2489999999999999999


Q ss_pred             CCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEE
Q 018072          166 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV  245 (361)
Q Consensus       166 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv  245 (361)
                      +++++++||++. ++.|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++++++++|+++++
T Consensus       141 ~~~~~~~aa~~~-~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~  217 (352)
T 1e3j_A          141 DNVSLEEGALLE-PLSVGVHAC-RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTL  217 (352)
T ss_dssp             TTSCHHHHHTHH-HHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEE
T ss_pred             CCCCHHHHHhhc-hHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEE
Confidence            999999998774 888999997 78899999999999999999999999999999 699999999999999999999999


Q ss_pred             cCCC-CCccHHHHHHHHcC----CCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh-ccccEEE
Q 018072          246 NTSE-HDRPIQEVIAEMTN----GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLK  319 (361)
Q Consensus       246 ~~~~-~~~~~~~~i~~~~~----~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~l~  319 (361)
                      ++.+ .+  +.+.+++.++    +++|+|||++|++..++.++++++++ |+++.+|.....  ..++...+ ++++++.
T Consensus       218 ~~~~~~~--~~~~i~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~--~~~~~~~~~~~~~~i~  292 (352)
T 1e3j_A          218 VVDPAKE--EESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GTLMLVGMGSQM--VTVPLVNACAREIDIK  292 (352)
T ss_dssp             ECCTTTS--CHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCSSC--CCCCHHHHHTTTCEEE
T ss_pred             cCccccc--HHHHHHHHhccccCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCC--ccccHHHHHhcCcEEE
Confidence            9874 44  5667777664    48999999999977899999999998 999999975433  33333333 4999999


Q ss_pred             EeeecCCCcCCcHHHHHHHHHcCCccc
Q 018072          320 GTFFGNYKPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       320 g~~~~~~~~~~~~~~~~~~~~~~~l~~  346 (361)
                      |++..    +++++++++++++|++++
T Consensus       293 g~~~~----~~~~~~~~~l~~~g~i~~  315 (352)
T 1e3j_A          293 SVFRY----CNDYPIALEMVASGRCNV  315 (352)
T ss_dssp             ECCSC----SSCHHHHHHHHHTTSCCC
T ss_pred             Eeccc----hHHHHHHHHHHHcCCCCh
Confidence            88643    478999999999998754

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=1.1e-53  Score=404.21  Aligned_cols=307  Identities=23%  Similarity=0.341  Sum_probs=260.0

Q ss_pred             cceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 018072            9 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV   88 (361)
Q Consensus         9 ~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~   88 (361)
                      ++|||+++.+++++++++++|.|+|+++||||||.++|||++|++++.|..+..++|.++|||++|+|+++|+++++|++
T Consensus         3 m~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~V~~vG~~v~~~~v   82 (348)
T 3two_A            3 VQSKGFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMIPGHEIAGIIKEVGKGVKKFKI   82 (348)
T ss_dssp             EEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTSSSCCCSSBCCCCCEEEEEEEECTTCCSCCT
T ss_pred             eEEEEEEEccCCCCCeEEEeeCCCCCCCeEEEEEEEeeecccchhhhcCCCCCCCCCeecCcceeEEEEEECCCCCCCCC
Confidence            68999999999888999999999999999999999999999999999998776788999999999999999999999999


Q ss_pred             CCEEeecCC-CCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072           89 GDHVLPVFT-GECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  167 (361)
Q Consensus        89 Gd~V~~~~~-~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~  167 (361)
                      ||+|++.+. .+|+.|++|++|++++|. ....   |.. .+   .....|     ....|+|+||+++|++.++++|++
T Consensus        83 GdrV~~~~~~~~Cg~C~~C~~g~~~~c~-~~~~---~~~-~~---~~~~~~-----~~~~G~~aey~~v~~~~~~~iP~~  149 (348)
T 3two_A           83 GDVVGVGCFVNSCKACKPCKEHQEQFCT-KVVF---TYD-CL---DSFHDN-----EPHMGGYSNNIVVDENYVISVDKN  149 (348)
T ss_dssp             TCEEEECSEEECCSCSHHHHTTCGGGCT-TCEE---SSS-SE---EGGGTT-----EECCCSSBSEEEEEGGGCEECCTT
T ss_pred             CCEEEEeCCcCCCCCChhHhCCCcccCc-cccc---ccc-cc---cccccC-----CcCCccccceEEechhhEEECCCC
Confidence            999988654 699999999999999998 3222   111 00   000000     112369999999999999999999


Q ss_pred             CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcC
Q 018072          168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  247 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~  247 (361)
                      +++++||.+++++.|||+++ +..++++|++|||+|+|++|++++|+|+.+|+ +|++++++++|+++++++|+++++ .
T Consensus       150 ~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~v~-~  226 (348)
T 3two_A          150 APLEKVAPLLCAGITTYSPL-KFSKVTKGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALSMGVKHFY-T  226 (348)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHHTTCSEEE-S
T ss_pred             CCHHHhhhhhhhHHHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCeec-C
Confidence            99999999999999999996 45699999999999999999999999999999 999999999999999999999988 2


Q ss_pred             CCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCC-CCce-eecChhhh-ccccEEEEeeec
Q 018072          248 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS-KDAV-FMTKPINV-LNERTLKGTFFG  324 (361)
Q Consensus       248 ~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~-~~~~-~~~~~~~~-~~~~~l~g~~~~  324 (361)
                       +.+ .+        ..++|+|||++|++..++.++++++++ |+++.+|... .... ++.. ..+ .+++++.|++.+
T Consensus       227 -~~~-~~--------~~~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~-~~~~~~~~~i~g~~~~  294 (348)
T 3two_A          227 -DPK-QC--------KEELDFIISTIPTHYDLKDYLKLLTYN-GDLALVGLPPVEVAPVLSVF-DFIHLGNRKVYGSLIG  294 (348)
T ss_dssp             -SGG-GC--------CSCEEEEEECCCSCCCHHHHHTTEEEE-EEEEECCCCCGGGCCEEEHH-HHHHTCSCEEEECCSC
T ss_pred             -CHH-HH--------hcCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEECCCCCCCcccCCHH-HHHhhCCeEEEEEecC
Confidence             211 11        128999999999976999999999998 9999999866 3333 3332 234 699999999866


Q ss_pred             CCCcCCcHHHHHHHHHcCCccc
Q 018072          325 NYKPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~l~~  346 (361)
                      .   .++++++++++++|++++
T Consensus       295 ~---~~~~~~~~~l~~~g~l~~  313 (348)
T 3two_A          295 G---IKETQEMVDFSIKHNIYP  313 (348)
T ss_dssp             C---HHHHHHHHHHHHHTTCCC
T ss_pred             C---HHHHHHHHHHHHhCCCCc
Confidence            5   368999999999998854

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=1.3e-52  Score=395.42  Aligned_cols=303  Identities=29%  Similarity=0.461  Sum_probs=266.3

Q ss_pred             eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCCCCCCC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~~~~~G   89 (361)
                      |||+++.+++.+++++++|.|+|+++||||||.++|||++|++++.|.++. ..+|.++|||++|+|+++|++|++|++|
T Consensus         1 Mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~GhE~~G~V~~vG~~v~~~~vG   80 (339)
T 1rjw_A            1 MKAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVG   80 (339)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCCTT
T ss_pred             CeEEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEeEchhhHHHhcCCCCcCCCCCeeccccceEEEEEECCCCCcCCCC
Confidence            899999999866999999999999999999999999999999999886542 4679999999999999999999999999


Q ss_pred             CEEeecCCC-CCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCC
Q 018072           90 DHVLPVFTG-ECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA  168 (361)
Q Consensus        90 d~V~~~~~~-~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~  168 (361)
                      |||++.+.. .|+.|++|+.|++++|.+....   |..                   ..|+|+||+++|++.++++|+++
T Consensus        81 drV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~---g~~-------------------~~G~~aey~~v~~~~~~~~P~~~  138 (339)
T 1rjw_A           81 DRVGIPWLYSACGHCDYCLSGQETLCEHQKNA---GYS-------------------VDGGYAEYCRAAADYVVKIPDNL  138 (339)
T ss_dssp             CEEEECSEEECCSCSHHHHTTCGGGCTTCEEB---TTT-------------------BCCSSBSEEEEEGGGCEECCTTS
T ss_pred             CEEEEecCCCCCCCCchhhCcCcccCCCccee---ecC-------------------CCCcceeeEEechHHEEECCCCC
Confidence            999987654 5999999999999999876544   321                   12489999999999999999999


Q ss_pred             ChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCC
Q 018072          169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  248 (361)
Q Consensus       169 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~  248 (361)
                      ++++||.+++++.|||+++.+ .++++|++|||+|+|++|++++|+|+..|+ +|++++++++++++++++|++.++++.
T Consensus       139 ~~~~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~d~~  216 (339)
T 1rjw_A          139 SFEEAAPIFCAGVTTYKALKV-TGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNPL  216 (339)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHH-HTCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECTT
T ss_pred             CHHHhhhhhhhHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEecCC
Confidence            999999999999999999754 589999999999999999999999999999 999999999999999999999999887


Q ss_pred             CCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeecCCC
Q 018072          249 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYK  327 (361)
Q Consensus       249 ~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~~~~  327 (361)
                      +.+  +.+.+++.+ +++|++||++|.+..++.++++++++ |+++.+|.....  ..++...++ +++++.|++.+.  
T Consensus       217 ~~~--~~~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~~--  288 (339)
T 1rjw_A          217 KED--AAKFMKEKV-GGVHAAVVTAVSKPAFQSAYNSIRRG-GACVLVGLPPEE--MPIPIFDTVLNGIKIIGSIVGT--  288 (339)
T ss_dssp             TSC--HHHHHHHHH-SSEEEEEESSCCHHHHHHHHHHEEEE-EEEEECCCCSSE--EEEEHHHHHHTTCEEEECCSCC--
T ss_pred             Ccc--HHHHHHHHh-CCCCEEEECCCCHHHHHHHHHHhhcC-CEEEEecccCCC--CccCHHHHHhCCcEEEEeccCC--
Confidence            654  777787777 68999999999988999999999997 999999986633  444444444 999999987544  


Q ss_pred             cCCcHHHHHHHHHcCCccc
Q 018072          328 PRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       328 ~~~~~~~~~~~~~~~~l~~  346 (361)
                       .+++++++++++++++++
T Consensus       289 -~~~~~~~~~l~~~g~l~~  306 (339)
T 1rjw_A          289 -RKDLQEALQFAAEGKVKT  306 (339)
T ss_dssp             -HHHHHHHHHHHHTTSCCC
T ss_pred             -HHHHHHHHHHHHcCCCCc
Confidence             468999999999999864

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=100.00  E-value=3.4e-53  Score=400.09  Aligned_cols=304  Identities=27%  Similarity=0.367  Sum_probs=266.5

Q ss_pred             eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCC---CCCCCcccccceeEEEEEeCCCCCCCC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESVGEGVSDLE   87 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~~G~~v~~~~   87 (361)
                      |||+++.+++++++++++|.|+|+++||||||.++|||++|++++.|..+   ...+|.++|||++|+|+++|+++++|+
T Consensus         1 Mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~   80 (343)
T 2dq4_A            1 MRALAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQ   80 (343)
T ss_dssp             CEEEEECSSSSSCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTCHHHHHHCCSSEECCCEEEEEEEEECTTCCSSC
T ss_pred             CeEEEEeCCCCcEEEEeccCCCCCCCEEEEEEEEEeechhhHHHHcCCCCccccCCCCCcCCccceEEEEEECCCCCcCC
Confidence            89999999987799999999999999999999999999999999988544   356799999999999999999999999


Q ss_pred             CCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072           88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  167 (361)
Q Consensus        88 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~  167 (361)
                      +||||++.+..+|+.|++|++|++++|.+....   |..                   ..|+|+||+++|++.++++|++
T Consensus        81 vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~---g~~-------------------~~G~~aey~~v~~~~~~~iP~~  138 (343)
T 2dq4_A           81 VGDHVSLESHIVCHACPACRTGNYHVCLNTQIL---GVD-------------------RDGGFAEYVVVPAENAWVNPKD  138 (343)
T ss_dssp             TTCEEEECCEECCSCSHHHHTTCGGGCTTCEEB---TTT-------------------BCCSSBSEEEEEGGGEEEECTT
T ss_pred             CCCEEEECCCCCCCCChhhhCcCcccCCCccee---cCC-------------------CCCcceeEEEEchHHeEECCCC
Confidence            999999999999999999999999999986544   321                   1248999999999999999999


Q ss_pred             CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcC
Q 018072          168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  247 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~  247 (361)
                      +++++||++. ++.|||+++.+.+++ +|++|||+|+|++|++++|+|+.+|+.+|++++++++++++++++ +++++++
T Consensus       139 ~~~~~aa~~~-~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~  215 (343)
T 2dq4_A          139 LPFEVAAILE-PFGNAVHTVYAGSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNP  215 (343)
T ss_dssp             SCHHHHTTHH-HHHHHHHHHHSTTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECT
T ss_pred             CCHHHHHhhh-HHHHHHHHHHHhCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCc
Confidence            9999999884 788999997557889 999999999999999999999999987899999999999999999 9999998


Q ss_pred             CCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecCh-hh-hccccEEEEeeecC
Q 018072          248 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-IN-VLNERTLKGTFFGN  325 (361)
Q Consensus       248 ~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~-~~~~~~l~g~~~~~  325 (361)
                      .+.+  +.+.++++++.++|+|||++|++..++.++++++++ |+++.+|.....  ..++. .. +.+++++.|++.+.
T Consensus       216 ~~~~--~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~~--~~~~~~~~~~~~~~~i~g~~~~~  290 (343)
T 2dq4_A          216 LEED--LLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPG-GEARILGIPSDP--IRFDLAGELVMRGITAFGIAGRR  290 (343)
T ss_dssp             TTSC--HHHHHHHHHSSCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECCCCSSC--EEECHHHHTGGGTCEEEECCSCC
T ss_pred             CccC--HHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCC--ceeCcHHHHHhCceEEEEeecCC
Confidence            7655  888888888338999999999988899999999997 999999986533  34444 33 34999999986542


Q ss_pred             CCcCCcHHHHHHHHHcCCccc
Q 018072          326 YKPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~l~~  346 (361)
                        .+++++++++++++|++++
T Consensus       291 --~~~~~~~~~~l~~~g~~~~  309 (343)
T 2dq4_A          291 --LWQTWMQGTALVYSGRVDL  309 (343)
T ss_dssp             --TTHHHHHHHHHHHHTSSCC
T ss_pred             --CHHHHHHHHHHHHcCCCCh
Confidence              2578999999999999754

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.8e-52  Score=394.51  Aligned_cols=310  Identities=25%  Similarity=0.418  Sum_probs=269.4

Q ss_pred             cccceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCCC
Q 018072            7 LILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSD   85 (361)
Q Consensus         7 ~~~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~~   85 (361)
                      +|.+|||+++.+++.+++++++|.|+|+++||||||.++|||++|++++.|.++. ..+|.++|||++|+|+++|++|++
T Consensus         2 ~p~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~   81 (347)
T 2hcy_A            2 IPETQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKG   81 (347)
T ss_dssp             CCSEEEEEEESSTTCCCEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSEECCCEEEEEEEEECTTCCS
T ss_pred             CCcccEEEEEeCCCCCCEEEEeeCCCCCCCEEEEEEEEEEechhHHHHhcCCCCCCCCCCcccCccceEEEEEECCCCCC
Confidence            5788999999999866999999999999999999999999999999999886542 467999999999999999999999


Q ss_pred             CCCCCEEeecCCC-CCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEEC
Q 018072           86 LEVGDHVLPVFTG-ECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI  164 (361)
Q Consensus        86 ~~~Gd~V~~~~~~-~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~i  164 (361)
                      |++||||++.+.. .|+.|++|++|++++|.+....   |..                   ..|+|+||+++|++.++++
T Consensus        82 ~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~---g~~-------------------~~G~~aey~~v~~~~~~~i  139 (347)
T 2hcy_A           82 WKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLS---GYT-------------------HDGSFQQYATADAVQAAHI  139 (347)
T ss_dssp             CCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEEB---TTT-------------------BCCSSBSEEEEETTTSEEE
T ss_pred             CcCCCEEEEecCCCCCCCChhhhCCCcccCcccccc---ccC-------------------CCCcceeEEEeccccEEEC
Confidence            9999999987654 5999999999999999976544   321                   1248999999999999999


Q ss_pred             CCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCE
Q 018072          165 NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD  243 (361)
Q Consensus       165 P~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~  243 (361)
                      |+++++++||.+++++.|||+++. ..++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++++.++++|++.
T Consensus       140 P~~~~~~~aa~l~~~~~ta~~~l~-~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~V~~~~~~~~~~~~~~~~g~~~  217 (347)
T 2hcy_A          140 PQGTDLAQVAPILCAGITVYKALK-SANLMAGHWVAISGAAGGLGSLAVQYAKAMGY-RVLGIDGGEGKEELFRSIGGEV  217 (347)
T ss_dssp             CTTCCHHHHGGGGTHHHHHHHHHH-TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSTTHHHHHHHTTCCE
T ss_pred             CCCCCHHHHHHHhhhHHHHHHHHH-hcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-cEEEEcCCHHHHHHHHHcCCce
Confidence            999999999999999999999964 458999999999998 9999999999999999 9999999999999999999999


Q ss_pred             EEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEee
Q 018072          244 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTF  322 (361)
Q Consensus       244 vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~  322 (361)
                      ++++.+.+ ++.+.+++.+++++|++||++|.+..+..+++.|+++ |+++.+|.... ....++...++ +++++.|++
T Consensus       218 ~~d~~~~~-~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~-~~~~~~~~~~~~~~~~i~g~~  294 (347)
T 2hcy_A          218 FIDFTKEK-DIVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRAN-GTTVLVGMPAG-AKCCSDVFNQVVKSISIVGSY  294 (347)
T ss_dssp             EEETTTCS-CHHHHHHHHHTSCEEEEEECSSCHHHHHHHTTSEEEE-EEEEECCCCTT-CEEEEEHHHHHHTTCEEEECC
T ss_pred             EEecCccH-hHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEEeCCCC-CCCCCCHHHHhhCCcEEEEcc
Confidence            98876322 3777888777668999999999988999999999997 99999998653 23444444444 999999987


Q ss_pred             ecCCCcCCcHHHHHHHHHcCCccc
Q 018072          323 FGNYKPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~~l~~  346 (361)
                      .+.   .++++++++++++|++++
T Consensus       295 ~~~---~~~~~~~~~l~~~g~l~~  315 (347)
T 2hcy_A          295 VGN---RADTREALDFFARGLVKS  315 (347)
T ss_dssp             CCC---HHHHHHHHHHHHTTSCCC
T ss_pred             CCC---HHHHHHHHHHHHhCCCcc
Confidence            544   468999999999999864

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=2.9e-53  Score=403.11  Aligned_cols=309  Identities=21%  Similarity=0.308  Sum_probs=262.3

Q ss_pred             cccceeEEEeecCCCCeEEEE--eecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCC
Q 018072            7 LILTCKAAVAWEAGKPLIIQD--VEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVS   84 (361)
Q Consensus         7 ~~~~m~a~~~~~~~~~~~~~~--~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~   84 (361)
                      +|.+|||+++.+++.++++++  +|.|+|+++||||||+++|||++|++++.|.++..++|.++|||++|+|+++|++++
T Consensus         3 ~p~~mka~~~~~~~~~l~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~GhE~~G~V~~vG~~v~   82 (360)
T 1piw_A            3 YPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKSN   82 (360)
T ss_dssp             TTTCEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCCCSSEECCCCEEEEEEEECTTCC
T ss_pred             CChheEEEEEecCCCCeeEEeccccCCCCCCCeEEEEEEEeccchhhHHHhcCCCCCCCCCcccCcCceEEEEEeCCCCC
Confidence            477899999999986688999  999999999999999999999999999988765556899999999999999999999


Q ss_pred             -CCCCCCEEeecC-CCCCCCCccccCCCCCCCccc--ccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccc
Q 018072           85 -DLEVGDHVLPVF-TGECGDCRHCRSDVSNMCDLL--RINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGC  160 (361)
Q Consensus        85 -~~~~Gd~V~~~~-~~~c~~c~~c~~~~~~~c~~~--~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~  160 (361)
                       +|++||||++.+ ..+|+.|++|++|++++|.+.  .+.   +.. ..|             ....|+|+||+++|++.
T Consensus        83 ~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~---~~~-~~g-------------~~~~G~~aey~~v~~~~  145 (360)
T 1piw_A           83 SGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYS---QPY-EDG-------------YVSQGGYANYVRVHEHF  145 (360)
T ss_dssp             SSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSS---CBC-TTS-------------CBCCCSSBSEEEEEGGG
T ss_pred             CCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccc---ccc-CCC-------------ccCCCcceeEEEEchhh
Confidence             999999996544 468999999999999999875  111   000 000             11235999999999999


Q ss_pred             eEECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcC
Q 018072          161 VAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG  240 (361)
Q Consensus       161 ~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G  240 (361)
                      ++++|+++++++||.+++++.|||+++.+ +++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++++++++|
T Consensus       146 ~~~iP~~~~~~~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~~~lG  223 (360)
T 1piw_A          146 VVPIPENIPSHLAAPLLCGGLTVYSPLVR-NGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMG  223 (360)
T ss_dssp             EEECCTTSCHHHHGGGGTHHHHHHHHHHH-TTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHT
T ss_pred             eEECCCCCCHHHhhhhhhhHHHHHHHHHH-cCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcC
Confidence            99999999999999999999999999755 899999999999999999999999999999 7999999999999999999


Q ss_pred             CCEEEcCCCC-CccHHHHHHHHcCCCccEEEEccCC--hHHHHHHHHHhcCCCcEEEEEcCCCCCc-eeecChhhhcccc
Q 018072          241 VTDFVNTSEH-DRPIQEVIAEMTNGGVDRSVECTGN--IDNMISAFECVHDGWGVAVLVGVPSKDA-VFMTKPINVLNER  316 (361)
Q Consensus       241 ~~~vv~~~~~-~~~~~~~i~~~~~~g~Dvvid~~g~--~~~~~~~~~~l~~~~G~iv~~g~~~~~~-~~~~~~~~~~~~~  316 (361)
                      +++++++.+. +  +.+.+.    +++|+|||++|.  +..++.++++++++ |+++.+|.... . .++.. ..+.+++
T Consensus       224 a~~v~~~~~~~~--~~~~~~----~~~D~vid~~g~~~~~~~~~~~~~l~~~-G~iv~~g~~~~-~~~~~~~-~~~~~~~  294 (360)
T 1piw_A          224 ADHYIATLEEGD--WGEKYF----DTFDLIVVCASSLTDIDFNIMPKAMKVG-GRIVSISIPEQ-HEMLSLK-PYGLKAV  294 (360)
T ss_dssp             CSEEEEGGGTSC--HHHHSC----SCEEEEEECCSCSTTCCTTTGGGGEEEE-EEEEECCCCCS-SCCEEEC-GGGCBSC
T ss_pred             CCEEEcCcCchH--HHHHhh----cCCCEEEECCCCCcHHHHHHHHHHhcCC-CEEEEecCCCC-ccccCHH-HHHhCCe
Confidence            9999988765 4  444332    489999999998  77888999999997 99999998664 2 33332 2234999


Q ss_pred             EEEEeeecCCCcCCcHHHHHHHHHcCCccc
Q 018072          317 TLKGTFFGNYKPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       317 ~l~g~~~~~~~~~~~~~~~~~~~~~~~l~~  346 (361)
                      ++.|++.+.   +++++++++++++|+++.
T Consensus       295 ~i~g~~~~~---~~~~~~~~~l~~~g~l~~  321 (360)
T 1piw_A          295 SISYSALGS---IKELNQLLKLVSEKDIKI  321 (360)
T ss_dssp             EEEECCCCC---HHHHHHHHHHHHHTTCCC
T ss_pred             EEEEEecCC---HHHHHHHHHHHHhCCCcc
Confidence            999987544   468999999999999864

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=2.8e-52  Score=394.56  Aligned_cols=304  Identities=23%  Similarity=0.352  Sum_probs=268.0

Q ss_pred             eeEEEeecCC-CCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018072           11 CKAAVAWEAG-KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (361)
Q Consensus        11 m~a~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~G   89 (361)
                      |||+++...+ ..++++|.|+|+|+|+||||||.++|||++|++++.|.++ .++|.++|||++|+|+++|++|++|++|
T Consensus         1 MKA~v~~~~~~~~~~l~e~~~P~~~p~eVLVkv~a~gic~~D~~~~~G~~~-~~~p~i~GhE~aG~V~~vG~~V~~~~~G   79 (348)
T 4eez_A            1 MKAAVVRHNPDGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDFG-NKAGTVLGHEGIGIVKEIGADVSSLQVG   79 (348)
T ss_dssp             CEEEEECSSCCSSEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTTTC-CCTTCBCCSEEEEEEEEECTTCCSCCTT
T ss_pred             CeEEEEEcCCCCcEEEEEeECCCCCCCEEEEEEEEEEECHHHHHHhcCCCC-CCCCcccceeEEEEEEEECceeeecccC
Confidence            8999986543 3499999999999999999999999999999999998765 4679999999999999999999999999


Q ss_pred             CEEeecCCC-CCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCC
Q 018072           90 DHVLPVFTG-ECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA  168 (361)
Q Consensus        90 d~V~~~~~~-~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~  168 (361)
                      |||++.+.. .|+.|.+|..+..+.|.+....   +..                   ..|+|+||+++|++.++++|+++
T Consensus        80 drV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---~~~-------------------~~G~~ae~~~~~~~~~~~iP~~~  137 (348)
T 4eez_A           80 DRVSVAWFFEGCGHCEYCVSGNETFCREVKNA---GYS-------------------VDGGMAEEAIVVADYAVKVPDGL  137 (348)
T ss_dssp             CEEEEESEEECCSSSHHHHTTCGGGCTTCEEB---TTT-------------------BCCSSBSEEEEEGGGSCBCCTTS
T ss_pred             CeEeecccccccCccccccCCccccccccccc---ccc-------------------cCCcceeeccccccceeecCCCC
Confidence            999877666 5689999999999999876654   221                   23499999999999999999999


Q ss_pred             ChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCC
Q 018072          169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  248 (361)
Q Consensus       169 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~  248 (361)
                      ++++||++++++.|||+++ +.+++++|++|||+|+|++|.+++|+|+.++..+|++++++++|+++++++|+++++++.
T Consensus       138 ~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~  216 (348)
T 4eez_A          138 DPIEASSITCAGVTTYKAI-KVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSG  216 (348)
T ss_dssp             CHHHHHHHHHHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-
T ss_pred             CHHHHhhcccceeeEEeee-cccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCC
Confidence            9999999999999999985 678899999999999999999999999988656999999999999999999999999998


Q ss_pred             CCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCCC
Q 018072          249 EHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK  327 (361)
Q Consensus       249 ~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~  327 (361)
                      +.+  +.+.+++++++ ++|+++++++++.++..++++++++ |+++.+|.......+++. ..+++++++.|++.++  
T Consensus       217 ~~~--~~~~v~~~t~g~g~d~~~~~~~~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~i~gs~~~~--  290 (348)
T 4eez_A          217 DVN--PVDEIKKITGGLGVQSAIVCAVARIAFEQAVASLKPM-GKMVAVAVPNTEMTLSVP-TVVFDGVEVAGSLVGT--  290 (348)
T ss_dssp             CCC--HHHHHHHHTTSSCEEEEEECCSCHHHHHHHHHTEEEE-EEEEECCCCSCEEEECHH-HHHHSCCEEEECCSCC--
T ss_pred             CCC--HHHHhhhhcCCCCceEEEEeccCcchhheeheeecCC-ceEEEEeccCCCCccCHH-HHHhCCeEEEEEecCC--
Confidence            877  88899999988 9999999999999999999999998 999999976644444432 2244999999998765  


Q ss_pred             cCCcHHHHHHHHHcCCcc
Q 018072          328 PRTDLPSVVDMYMNKVIR  345 (361)
Q Consensus       328 ~~~~~~~~~~~~~~~~l~  345 (361)
                       +.+++++++++++|+++
T Consensus       291 -~~~~~~~~~l~~~g~i~  307 (348)
T 4eez_A          291 -RLDLAEAFQFGAEGKVK  307 (348)
T ss_dssp             -HHHHHHHHHHHHTTSCC
T ss_pred             -HHHHHHHHHHHHcCCCE
Confidence             47899999999999984

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.4e-52  Score=401.05  Aligned_cols=315  Identities=24%  Similarity=0.350  Sum_probs=268.3

Q ss_pred             ccceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCC---
Q 018072            8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVS---   84 (361)
Q Consensus         8 ~~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~---   84 (361)
                      -.+|||+++.++++.++++++|.|+|+++||||||.++|||++|++++.|.++...+|.++|||++|+|+++| +|+   
T Consensus        15 ~~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~P~v~GhE~~G~V~~vG-~V~~~~   93 (380)
T 1vj0_A           15 GLKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVN-GEKRDL   93 (380)
T ss_dssp             CEEEEEEEBCSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEES-SCCBCT
T ss_pred             hhheEEEEEecCCCCeEEEEccCCCCCCCEEEEEEeEEeecccchHHhcCCCCCCCCCcccCcCcEEEEEEeC-Cccccc
Confidence            3679999999999449999999999999999999999999999999999865545689999999999999999 999   


Q ss_pred             ---CCCCCCEEeecCCCCCCCCcccc-CCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEE-ecc
Q 018072           85 ---DLEVGDHVLPVFTGECGDCRHCR-SDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVV-HSG  159 (361)
Q Consensus        85 ---~~~~Gd~V~~~~~~~c~~c~~c~-~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v-~~~  159 (361)
                         +|++||||++.+..+|+.|++|+ +|++++|.+....   |.....+ .          .....|+|+||+++ |++
T Consensus        94 ~~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~~---g~~~~~~-~----------~~~~~G~~aey~~v~~~~  159 (380)
T 1vj0_A           94 NGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVY---GINRGCS-E----------YPHLRGCYSSHIVLDPET  159 (380)
T ss_dssp             TSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEET---TTTCCSS-S----------TTCCCSSSBSEEEECTTC
T ss_pred             cCCCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCccee---ccccccC-C----------CCCCCccccceEEEcccc
Confidence               89999999999999999999999 9999999976543   3210000 0          00113599999999 999


Q ss_pred             ceEECCCCCChh-hhhccccchhhhhhhhhhhcC-CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 018072          160 CVAKINPLAPLD-KVCILSCGVSTGLGATLNVAK-PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK  237 (361)
Q Consensus       160 ~~~~iP~~~~~~-~aa~l~~~~~ta~~a~~~~~~-~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~  237 (361)
                      .++++|++++++ +|++++ ++.|||+++ +.++ +++|++|||+|+|++|++++|+|+.+|+.+|++++++++++++++
T Consensus       160 ~~~~iP~~l~~~~~Aa~~~-~~~ta~~al-~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~  237 (380)
T 1vj0_A          160 DVLKVSEKDDLDVLAMAMC-SGATAYHAF-DEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE  237 (380)
T ss_dssp             CEEEECTTSCHHHHHHHTT-HHHHHHHHH-HTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH
T ss_pred             eEEECCCCCChHHhHhhhc-HHHHHHHHH-HhcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH
Confidence            999999999999 777776 999999997 6688 999999999999999999999999999559999999999999999


Q ss_pred             HcCCCEEEcCCC-CCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCC-CCceeecChhh--h
Q 018072          238 KFGVTDFVNTSE-HDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS-KDAVFMTKPIN--V  312 (361)
Q Consensus       238 ~~G~~~vv~~~~-~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~-~~~~~~~~~~~--~  312 (361)
                      ++|+++++++.. .+.++.+.+++++++ ++|+|||++|++..+..++++|+++ |+++.+|... .. ...++...  +
T Consensus       238 ~lGa~~vi~~~~~~~~~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~-~~~~~~~~~~~  315 (380)
T 1vj0_A          238 EIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-GFYSVAGVAVPQD-PVPFKVYEWLV  315 (380)
T ss_dssp             HTTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCSCCC-CEEECHHHHTT
T ss_pred             HcCCcEEEeccccCcchHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcC-CEEEEEecCCCCC-CeeEchHHHHH
Confidence            999999998761 122377888888877 8999999999878899999999998 9999999865 31 23444444  3


Q ss_pred             ccccEEEEeeecCCCcCCcHHHHHHHHHc--CCc
Q 018072          313 LNERTLKGTFFGNYKPRTDLPSVVDMYMN--KVI  344 (361)
Q Consensus       313 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~--~~l  344 (361)
                      .+++++.|++.+.   +++++++++++++  |++
T Consensus       316 ~~~~~i~g~~~~~---~~~~~~~~~l~~~~~g~l  346 (380)
T 1vj0_A          316 LKNATFKGIWVSD---TSHFVKTVSITSRNYQLL  346 (380)
T ss_dssp             TTTCEEEECCCCC---HHHHHHHHHHHHTCHHHH
T ss_pred             hCCeEEEEeecCC---HHHHHHHHHHHHhhcCCe
Confidence            4999999987654   4789999999999  877

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=1.9e-52  Score=395.16  Aligned_cols=302  Identities=27%  Similarity=0.407  Sum_probs=256.7

Q ss_pred             cceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCC--CCCCCcccccceeEEEEEeCCCCCCC
Q 018072            9 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ--TPLFPRIFGHEAAGVVESVGEGVSDL   86 (361)
Q Consensus         9 ~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~--~~~~p~~~G~e~~G~V~~~G~~v~~~   86 (361)
                      .+|||+++.+++++++++++|.|+|+++||||||+++|||++|++++.|.++  ...+|.++|||++|+|+++|++ ++|
T Consensus         2 ~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~E~~G~V~~vG~~-~~~   80 (344)
T 2h6e_A            2 VKSKAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVGEL-AKV   80 (344)
T ss_dssp             EEEEBCEECSCCC-----EEEECCCCTTCEEEEEEEEECCHHHHHHHTTSCCCTTCCSSEECCCCEEEEEEEECTT-CCC
T ss_pred             ceeEEEEEecCCCCCeEEEeeCCCCCCCEEEEEEEEEEechhhHHHHcCCCcccCCCCCccccccceEEEEEECCC-CCC
Confidence            4699999999986699999999999999999999999999999999988665  3468999999999999999999 999


Q ss_pred             CCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEe-ccceEECC
Q 018072           87 EVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVH-SGCVAKIN  165 (361)
Q Consensus        87 ~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~-~~~~~~iP  165 (361)
                      ++||||+..+..+|+.|++|++|++++|.+....   |..                   ..|+|+||+++| ++.++++ 
T Consensus        81 ~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~---G~~-------------------~~G~~aey~~v~~~~~~~~i-  137 (344)
T 2h6e_A           81 KKGDNVVVYATWGDLTCRYCREGKFNICKNQIIP---GQT-------------------TNGGFSEYMLVKSSRWLVKL-  137 (344)
T ss_dssp             CTTCEEEECSCBCCSCSTTGGGTCGGGCTTCBCB---TTT-------------------BCCSSBSEEEESCGGGEEEE-
T ss_pred             CCCCEEEECCCCCCCCChhhhCCCcccCCCcccc---ccc-------------------cCCcceeeEEecCcccEEEe-
Confidence            9999999999999999999999999999876433   321                   124899999999 9999999 


Q ss_pred             CCCChhhhhccccchhhhhhhhhhh----cCCCCCCEEEEEcCCHHHHHHHHHHHHc--CCCeEEEEcCChhhHHHHHHc
Q 018072          166 PLAPLDKVCILSCGVSTGLGATLNV----AKPERGSSVAVFGLGAVGLAAAEGARIA--GASRIIGVDRSSKRFEEAKKF  239 (361)
Q Consensus       166 ~~~~~~~aa~l~~~~~ta~~a~~~~----~~~~~g~~VlI~G~g~vG~~a~~~a~~~--g~~~Vi~~~~~~~~~~~~~~~  239 (361)
                      +++++++||.+++++.|||+++.+.    .++ +|++|||+|+|++|++++|+|+.+  |+ +|++++++++|+++++++
T Consensus       138 ~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga-~Vi~~~~~~~~~~~~~~l  215 (344)
T 2h6e_A          138 NSLSPVEAAPLADAGTTSMGAIRQALPFISKF-AEPVVIVNGIGGLAVYTIQILKALMKNI-TIVGISRSKKHRDFALEL  215 (344)
T ss_dssp             SSSCHHHHGGGGTHHHHHHHHHHHHHHHHTTC-SSCEEEEECCSHHHHHHHHHHHHHCTTC-EEEEECSCHHHHHHHHHH
T ss_pred             CCCCHHHhhhhhhhhHHHHHHHHhhhhcccCC-CCCEEEEECCCHHHHHHHHHHHHhcCCC-EEEEEeCCHHHHHHHHHh
Confidence            9999999999999999999997554    288 999999999999999999999999  99 899999999999999999


Q ss_pred             CCCEEEcCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccE
Q 018072          240 GVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERT  317 (361)
Q Consensus       240 G~~~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~  317 (361)
                      |+++++++.+.    .+.+.+++++ ++|+|||++|++..++.++++++++ |+++.+|.....  ..++...++ ++++
T Consensus       216 Ga~~vi~~~~~----~~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~~--~~~~~~~~~~~~~~  288 (344)
T 2h6e_A          216 GADYVSEMKDA----ESLINKLTDGLGASIAIDLVGTEETTYNLGKLLAQE-GAIILVGMEGKR--VSLEAFDTAVWNKK  288 (344)
T ss_dssp             TCSEEECHHHH----HHHHHHHHTTCCEEEEEESSCCHHHHHHHHHHEEEE-EEEEECCCCSSC--CCCCHHHHHHTTCE
T ss_pred             CCCEEeccccc----hHHHHHhhcCCCccEEEECCCChHHHHHHHHHhhcC-CEEEEeCCCCCC--cccCHHHHhhCCcE
Confidence            99999876430    1234455556 8999999999977999999999997 999999986533  334444444 9999


Q ss_pred             EEEeeecCCCcCCcHHHHHHHHHcCCccc
Q 018072          318 LKGTFFGNYKPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       318 l~g~~~~~~~~~~~~~~~~~~~~~~~l~~  346 (361)
                      +.|++.+.   +++++++++++++|+++.
T Consensus       289 i~g~~~~~---~~~~~~~~~l~~~g~i~~  314 (344)
T 2h6e_A          289 LLGSNYGS---LNDLEDVVRLSESGKIKP  314 (344)
T ss_dssp             EEECCSCC---HHHHHHHHHHHHTTSSCC
T ss_pred             EEEEecCC---HHHHHHHHHHHHcCCCCc
Confidence            99987543   478999999999998854

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=5.2e-52  Score=392.05  Aligned_cols=304  Identities=24%  Similarity=0.399  Sum_probs=267.6

Q ss_pred             eeEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 018072           11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE   87 (361)
Q Consensus        11 m~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~~~~   87 (361)
                      |||+++.+++.+  ++++++|.|+|+++||||||.++|||++|++++.|.++. ..+|.++|||++|+|+++|+++++|+
T Consensus         1 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~   80 (343)
T 2eih_A            1 MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSGVVDAVGPGVEGFA   80 (343)
T ss_dssp             CEEEEECSSSSGGGEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSSTTCCSSEECCSEEEEEEEEECSSCCSCC
T ss_pred             CeEEEEecCCCCceEEEEecCCCCCCCCEEEEEEEEEEeCHHHHHHhcCCCCCCCCCCcccccceEEEEEEECCCCCCCC
Confidence            899999999875  899999999999999999999999999999999886543 36799999999999999999999999


Q ss_pred             CCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072           88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  167 (361)
Q Consensus        88 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~  167 (361)
                      +||||++.+..+|+.|++|+.|++++|.+....   |.. .                  .|+|+||+++|++.++++|++
T Consensus        81 vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~---G~~-~------------------~G~~aey~~v~~~~~~~~P~~  138 (343)
T 2eih_A           81 PGDEVVINPGLSCGRCERCLAGEDNLCPRYQIL---GEH-R------------------HGTYAEYVVLPEANLAPKPKN  138 (343)
T ss_dssp             TTCEEEECCEECCSCSHHHHTTCGGGCTTCEET---TTS-S------------------CCSSBSEEEEEGGGEEECCTT
T ss_pred             CCCEEEECCCCCcccchhhccCccccccccccc---CcC-C------------------CccceeEEEeChHHeEECCCC
Confidence            999999999999999999999999999987644   321 1                  248999999999999999999


Q ss_pred             CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEc
Q 018072          168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  246 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~  246 (361)
                      +++++||++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++++.++++|++.+++
T Consensus       139 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~ga~~~~d  217 (343)
T 2eih_A          139 LSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKALGADETVN  217 (343)
T ss_dssp             SCHHHHHHSHHHHHHHHHHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHhhchhhHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEc
Confidence            9999999999999999999866679999999999998 9999999999999999 9999999999999999999999998


Q ss_pred             CCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh-ccccEEEEeeec
Q 018072          247 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFG  324 (361)
Q Consensus       247 ~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~  324 (361)
                      +.+.+  +.+.+.+.+++ ++|++||++| .+.+..++++++++ |+++.+|..... ...++...+ .+++++.|++.+
T Consensus       218 ~~~~~--~~~~~~~~~~~~~~d~vi~~~g-~~~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~g~~~~  292 (343)
T 2eih_A          218 YTHPD--WPKEVRRLTGGKGADKVVDHTG-ALYFEGVIKATANG-GRIAIAGASSGY-EGTLPFAHVFYRQLSILGSTMA  292 (343)
T ss_dssp             TTSTT--HHHHHHHHTTTTCEEEEEESSC-SSSHHHHHHHEEEE-EEEEESSCCCSC-CCCCCTTHHHHTTCEEEECCSC
T ss_pred             CCccc--HHHHHHHHhCCCCceEEEECCC-HHHHHHHHHhhccC-CEEEEEecCCCC-cCccCHHHHHhCCcEEEEecCc
Confidence            87655  77888888766 8999999999 48899999999997 999999976533 222333333 499999998643


Q ss_pred             CCCcCCcHHHHHHHHHcCCcc
Q 018072          325 NYKPRTDLPSVVDMYMNKVIR  345 (361)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~l~  345 (361)
                      .   .++++++++++++|+++
T Consensus       293 ~---~~~~~~~~~l~~~g~l~  310 (343)
T 2eih_A          293 S---KSRLFPILRFVEEGKLK  310 (343)
T ss_dssp             C---GGGHHHHHHHHHHTSSC
T ss_pred             c---HHHHHHHHHHHHcCCCC
Confidence            3   57899999999999884

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=2.2e-51  Score=390.63  Aligned_cols=305  Identities=20%  Similarity=0.225  Sum_probs=261.9

Q ss_pred             ccccceeEEEeecCC-CCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCC-CCCCCcccccceeEEEEEeCCCC
Q 018072            6 GLILTCKAAVAWEAG-KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESVGEGV   83 (361)
Q Consensus         6 ~~~~~m~a~~~~~~~-~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~v   83 (361)
                      .+|.+|||+++.+++ +.++++++|.|+|+++||||||.++|||++|++++.|.++ ..++|.++|||++|+|+++|+++
T Consensus        23 ~m~~~mkA~~~~~~~~~~l~~~e~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~GhE~~G~V~~vG~~v  102 (363)
T 3uog_A           23 MMSKWMQEWSTETVAPHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGVVEAVGKSV  102 (363)
T ss_dssp             CCCSEEEEEEBSCTTTTCCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCTTCCCCSSBCCCCEEEEEEEEECTTC
T ss_pred             cCchhhEEEEEccCCCCCcEEEeeeCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCcCcccceEEEEEEECCCC
Confidence            357889999999764 3499999999999999999999999999999999998765 35689999999999999999999


Q ss_pred             CCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCc-ccccccCCCcccccCCCccccccCcccceeeEEEeccceE
Q 018072           84 SDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV-RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVA  162 (361)
Q Consensus        84 ~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~-~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~  162 (361)
                      ++|++||||++.+..      .|+.|. +.|.+...... +|.                   ...|+|+||+++|++.++
T Consensus       103 ~~~~vGDrV~~~~~~------~c~~g~-~~c~~~~~~~~~~g~-------------------~~~G~~aey~~v~~~~~~  156 (363)
T 3uog_A          103 TRFRPGDRVISTFAP------GWLDGL-RPGTGRTPAYETLGG-------------------AHPGVLSEYVVLPEGWFV  156 (363)
T ss_dssp             CSCCTTCEEEECSST------TCCSSS-CCSCSSCCCCCCTTT-------------------TSCCCCBSEEEEEGGGEE
T ss_pred             CCCCCCCEEEEeccc------cccccc-cccccccccccccCc-------------------CCCCcceeEEEechHHeE
Confidence            999999999987654      567788 88874321100 121                   123599999999999999


Q ss_pred             ECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC
Q 018072          163 KINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT  242 (361)
Q Consensus       163 ~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~  242 (361)
                      ++|+++++++||++++++.|||+++.+.+++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++++++++|++
T Consensus       157 ~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~  235 (363)
T 3uog_A          157 AAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFALGAD  235 (363)
T ss_dssp             ECCTTSCHHHHHTTTTHHHHHHHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTCS
T ss_pred             ECCCCCCHHHHhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEecCchhHHHHHHcCCC
Confidence            9999999999999999999999998788999999999999999999999999999999 999999999999999999999


Q ss_pred             EEEcCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh-ccccEEEE
Q 018072          243 DFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKG  320 (361)
Q Consensus       243 ~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~l~g  320 (361)
                      ++++....+  +.+.+++++++ ++|+|||++|. ..+..++++++++ |+++.+|..... ...++...+ .+++++.|
T Consensus       236 ~vi~~~~~~--~~~~v~~~~~g~g~D~vid~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~~~~i~g  310 (363)
T 3uog_A          236 HGINRLEED--WVERVYALTGDRGADHILEIAGG-AGLGQSLKAVAPD-GRISVIGVLEGF-EVSGPVGPLLLKSPVVQG  310 (363)
T ss_dssp             EEEETTTSC--HHHHHHHHHTTCCEEEEEEETTS-SCHHHHHHHEEEE-EEEEEECCCSSC-EECCBTTHHHHTCCEEEE
T ss_pred             EEEcCCccc--HHHHHHHHhCCCCceEEEECCCh-HHHHHHHHHhhcC-CEEEEEecCCCc-ccCcCHHHHHhCCcEEEE
Confidence            999844344  88899999888 99999999996 7899999999998 999999987642 334444443 49999999


Q ss_pred             eeecCCCcCCcHHHHHHHHHcCCcc
Q 018072          321 TFFGNYKPRTDLPSVVDMYMNKVIR  345 (361)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~l~  345 (361)
                      ++.+.   +++++++++++++++++
T Consensus       311 ~~~~~---~~~~~~~~~l~~~g~l~  332 (363)
T 3uog_A          311 ISVGH---RRALEDLVGAVDRLGLK  332 (363)
T ss_dssp             CCCCC---HHHHHHHHHHHHHHTCC
T ss_pred             EecCC---HHHHHHHHHHHHcCCCc
Confidence            88654   47899999999998873

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=100.00  E-value=2.5e-51  Score=395.59  Aligned_cols=306  Identities=23%  Similarity=0.326  Sum_probs=261.7

Q ss_pred             ceeEEEeecCCCCeEEEEeecCC-CCCCeEEEEEeEEecCccchhccccCCC-------CCCCCcccccceeEEEEEeCC
Q 018072           10 TCKAAVAWEAGKPLIIQDVEVAP-PQAMEVRIKIKYTSLCRTDLYFWESKGQ-------TPLFPRIFGHEAAGVVESVGE   81 (361)
Q Consensus        10 ~m~a~~~~~~~~~~~~~~~~~p~-~~~~evlVkv~~~~i~~~D~~~~~g~~~-------~~~~p~~~G~e~~G~V~~~G~   81 (361)
                      +|++++++.++. ++++++|.|+ |+++||||||.++|||++|++++.|...       ..++|.++|||++|+|+++|+
T Consensus        30 ~m~a~~~~~~~~-l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~P~i~G~E~~G~V~~vG~  108 (404)
T 3ip1_A           30 TWLGSKVWRYPE-VRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGP  108 (404)
T ss_dssp             BSCGGGTEEEEE-EEEEEECCCCCCSTTEEEEEEEEEECCHHHHHHHCBCTTSBBSCCSCBCSSEECCCEEEEEEEEECT
T ss_pred             hcceEEEEeCCc-eEEEEcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCCCCccccccccCCCCcccCccceEEEEEECC
Confidence            344444444443 7899999999 9999999999999999999999876421       236799999999999999999


Q ss_pred             CC------CCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEE
Q 018072           82 GV------SDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTV  155 (361)
Q Consensus        82 ~v------~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~  155 (361)
                      +|      ++|++||||++.+..+|+.|++|++|+++.|.+....   |..                   ..|+|+||++
T Consensus       109 ~v~~~~~~~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~---g~~-------------------~~G~~aey~~  166 (404)
T 3ip1_A          109 EAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNEL---GFN-------------------VDGAFAEYVK  166 (404)
T ss_dssp             TCEETTTTEECCTTCEEEECSEECCSCSHHHHTTCGGGCTTCEEB---TTT-------------------BCCSSBSEEE
T ss_pred             CccccccCCCCCCCCEEEECCccCCCCCHHHHCcCcccCcccccc---CCC-------------------CCCCCcceEE
Confidence            99      8899999999999999999999999999999987655   322                   1248999999


Q ss_pred             EeccceEECCCCCC------hhhhhccccchhhhhhhhhhh-cCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcC
Q 018072          156 VHSGCVAKINPLAP------LDKVCILSCGVSTGLGATLNV-AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR  228 (361)
Q Consensus       156 v~~~~~~~iP~~~~------~~~aa~l~~~~~ta~~a~~~~-~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~  228 (361)
                      +|++.++++|++++      +.++|+++.++.|||+++... +++++|++|||+|+|++|++++|+|+.+|+.+|+++++
T Consensus       167 v~~~~~~~iP~~~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~  246 (404)
T 3ip1_A          167 VDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEP  246 (404)
T ss_dssp             EEGGGEEECGGGBTTBCTHHHHHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECS
T ss_pred             echHHeEeccccccccccccchhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECC
Confidence            99999999999875      455888888999999997655 48999999999999999999999999999989999999


Q ss_pred             ChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCC-CccEEEEccCCh-HHHHHHHHHh----cCCCcEEEEEcCCCCC
Q 018072          229 SSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNI-DNMISAFECV----HDGWGVAVLVGVPSKD  302 (361)
Q Consensus       229 ~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~-~~~~~~~~~l----~~~~G~iv~~g~~~~~  302 (361)
                      +++|+++++++|+++++++.+.+  +.+.+++++++ ++|+|||++|++ ..+..+++.|    +++ |+++.+|.....
T Consensus       247 ~~~~~~~~~~lGa~~vi~~~~~~--~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~-G~iv~~G~~~~~  323 (404)
T 3ip1_A          247 SEVRRNLAKELGADHVIDPTKEN--FVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGIN-ATVAIVARADAK  323 (404)
T ss_dssp             CHHHHHHHHHHTCSEEECTTTSC--HHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCC-CEEEECSCCCSC
T ss_pred             CHHHHHHHHHcCCCEEEcCCCCC--HHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCC-cEEEEeCCCCCC
Confidence            99999999999999999987766  88999999988 999999999996 3677788888    998 999999987754


Q ss_pred             ceeecChhhhc-cccEEEEeeecCCCcCCcHHHHHHHHHcCCccc
Q 018072          303 AVFMTKPINVL-NERTLKGTFFGNYKPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       303 ~~~~~~~~~~~-~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l~~  346 (361)
                      ..  ++...++ +++++.|++...  ..++++++++++++| +++
T Consensus       324 ~~--~~~~~~~~~~~~i~g~~~~~--~~~~~~~~~~ll~~g-l~~  363 (404)
T 3ip1_A          324 IP--LTGEVFQVRRAQIVGSQGHS--GHGTFPRVISLMASG-MDM  363 (404)
T ss_dssp             EE--ECHHHHHHTTCEEEECCCCC--STTHHHHHHHHHHTT-CCG
T ss_pred             Cc--ccHHHHhccceEEEEecCCC--chHHHHHHHHHHHcC-CCh
Confidence            44  4444444 999999987533  257899999999999 754

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=5.5e-52  Score=395.34  Aligned_cols=313  Identities=25%  Similarity=0.353  Sum_probs=257.2

Q ss_pred             cccceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCC
Q 018072            7 LILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDL   86 (361)
Q Consensus         7 ~~~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~   86 (361)
                      ..++|+|+++.++++.++++++|.|+|+++||||||.++|||++|++++.|..+...+|.++|||++|+|+++|++|++|
T Consensus        19 ~~~~~~a~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~~   98 (369)
T 1uuf_A           19 AGLKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKY   98 (369)
T ss_dssp             ----CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCCCSSBCCCCCEEEEEEEECTTCCSC
T ss_pred             cCceEEEEEEcCCCCCcEEEEecCCCCCCCeEEEEEEEEeecHHHHHHhcCCCCCCCCCeecccCceEEEEEECCCCCCC
Confidence            45789999998887779999999999999999999999999999999998866555689999999999999999999999


Q ss_pred             CCCCEEeecCCC-CCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECC
Q 018072           87 EVGDHVLPVFTG-ECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN  165 (361)
Q Consensus        87 ~~Gd~V~~~~~~-~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP  165 (361)
                      ++||||++.+.. +|+.|++|++|++++|.+....- .+.....|             ....|+|+||+++|++.++++|
T Consensus        99 ~vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~-~~~~~~~g-------------~~~~G~~aeyv~v~~~~~~~~P  164 (369)
T 1uuf_A           99 APGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTY-NSPTPDEP-------------GHTLGGYSQQIVVHERYVLRIR  164 (369)
T ss_dssp             CTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETT-TSBCSSTT-------------SBCCCSSBSEEEEEGGGCEECC
T ss_pred             CCCCEEEEccCCCCCCCCcccCCCCcccCcchhccc-ccccccCC-------------CCCCCcccceEEEcchhEEECC
Confidence            999999988764 69999999999999998752110 00000000             0123599999999999999999


Q ss_pred             CC-CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEE
Q 018072          166 PL-APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF  244 (361)
Q Consensus       166 ~~-~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~v  244 (361)
                      ++ +++++||.+++++.|||+++.+ .++++|++|||+|+|++|++++|+|+.+|+ +|++++++++++++++++|++++
T Consensus       165 ~~~ls~~~aa~l~~~~~tA~~al~~-~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~Vi~~~~~~~~~~~a~~lGa~~v  242 (369)
T 1uuf_A          165 HPQEQLAAVAPLLCAGITTYSPLRH-WQAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKALGADEV  242 (369)
T ss_dssp             SCGGGHHHHGGGGTHHHHHHHHHHH-TTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEE
T ss_pred             CCCCCHHHhhhhhhhHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCcEE
Confidence            99 9999999999999999999754 689999999999999999999999999999 79999999999999999999999


Q ss_pred             EcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh-ccccEEEEeee
Q 018072          245 VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFF  323 (361)
Q Consensus       245 v~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~  323 (361)
                      +++.+.+  +   +..+. +++|+|||++|.+..++.++++++++ |+++.+|...... ..++...+ .+++++.|++.
T Consensus       243 i~~~~~~--~---~~~~~-~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~-~~~~~~~~~~~~~~i~g~~~  314 (369)
T 1uuf_A          243 VNSRNAD--E---MAAHL-KSFDFILNTVAAPHNLDDFTTLLKRD-GTMTLVGAPATPH-KSPEVFNLIMKRRAIAGSMI  314 (369)
T ss_dssp             EETTCHH--H---HHTTT-TCEEEEEECCSSCCCHHHHHTTEEEE-EEEEECCCC--------CHHHHHTTTCEEEECCS
T ss_pred             eccccHH--H---HHHhh-cCCCEEEECCCCHHHHHHHHHHhccC-CEEEEeccCCCCc-cccCHHHHHhCCcEEEEeec
Confidence            9876532  2   22333 48999999999877899999999997 9999999865332 13344333 49999999876


Q ss_pred             cCCCcCCcHHHHHHHHHcCCccc
Q 018072          324 GNYKPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~l~~  346 (361)
                      +.   .++++++++++++|++++
T Consensus       315 ~~---~~~~~~~~~l~~~g~i~~  334 (369)
T 1uuf_A          315 GG---IPETQEMLDFCAEHGIVA  334 (369)
T ss_dssp             CC---HHHHHHHHHHHHHHTCCC
T ss_pred             CC---HHHHHHHHHHHHhCCCCc
Confidence            54   468999999999998854

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=3.6e-51  Score=386.86  Aligned_cols=301  Identities=26%  Similarity=0.385  Sum_probs=265.4

Q ss_pred             eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCC--------CCCCCcccccceeEEEEEeCCC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ--------TPLFPRIFGHEAAGVVESVGEG   82 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~--------~~~~p~~~G~e~~G~V~~~G~~   82 (361)
                      |||+++.+++.+++++++|.|+|+++||||||.++|||++|++++.|..+        ...+|.++|||++|+|+++|++
T Consensus         1 Mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   80 (347)
T 1jvb_A            1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDE   80 (347)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTT
T ss_pred             CeEEEEecCCCCeEEEEeeCCCCCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccceEEEEEECCC
Confidence            89999999986699999999999999999999999999999999887544        2467999999999999999999


Q ss_pred             CCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEec-cce
Q 018072           83 VSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHS-GCV  161 (361)
Q Consensus        83 v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~-~~~  161 (361)
                      +++|++||||+..+..+|+.|++|++|++++|.+....   |..                   ..|+|+||+++|+ +.+
T Consensus        81 v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~---G~~-------------------~~G~~aey~~v~~~~~~  138 (347)
T 1jvb_A           81 VVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWL---GIN-------------------FDGAYAEYVIVPHYKYM  138 (347)
T ss_dssp             CCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEB---TTT-------------------BCCSSBSEEEESCGGGE
T ss_pred             CCCCCCCCEEEeCCCCCCCCChhhhCcCcccCcccccc---ccc-------------------CCCcceeEEEecCccce
Confidence            99999999999999999999999999999999976544   321                   1248999999999 999


Q ss_pred             EECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCC-HHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHHc
Q 018072          162 AKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLG-AVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKF  239 (361)
Q Consensus       162 ~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g-~vG~~a~~~a~~~-g~~~Vi~~~~~~~~~~~~~~~  239 (361)
                      +++ +++++++||.+++++.|||+++ +.+++++|++|||+|+| ++|++++|+|+.. |+ +|+++++++++++.++++
T Consensus       139 ~~i-~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga-~Vi~~~~~~~~~~~~~~~  215 (347)
T 1jvb_A          139 YKL-RRLNAVEAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKRA  215 (347)
T ss_dssp             EEC-SSSCHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHHHH
T ss_pred             EEe-CCCCHHHcccchhhHHHHHHHH-HhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHHh
Confidence            999 9999999999999999999997 55899999999999985 9999999999999 99 899999999999999999


Q ss_pred             CCCEEEcCCCCCccHHHHHHHHcC-CCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCC-CCceeecChhhh-cccc
Q 018072          240 GVTDFVNTSEHDRPIQEVIAEMTN-GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS-KDAVFMTKPINV-LNER  316 (361)
Q Consensus       240 G~~~vv~~~~~~~~~~~~i~~~~~-~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~-~~~~~~~~~~~~-~~~~  316 (361)
                      |++.++++.+.+  +.+.+.+++. +++|++||++|++..++.++++++++ |+++.+|... ..   .++...+ .+++
T Consensus       216 g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~~~---~~~~~~~~~~~~  289 (347)
T 1jvb_A          216 GADYVINASMQD--PLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMVGLFGADL---HYHAPLITLSEI  289 (347)
T ss_dssp             TCSEEEETTTSC--HHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEE-EEEEECCSSCCCC---CCCHHHHHHHTC
T ss_pred             CCCEEecCCCcc--HHHHHHHHhcCCCceEEEECCCCHHHHHHHHHHHhcC-CEEEEECCCCCCC---CCCHHHHHhCce
Confidence            999999887655  7777888776 58999999999977899999999997 9999999765 33   3444443 4999


Q ss_pred             EEEEeeecCCCcCCcHHHHHHHHHcCCcc
Q 018072          317 TLKGTFFGNYKPRTDLPSVVDMYMNKVIR  345 (361)
Q Consensus       317 ~l~g~~~~~~~~~~~~~~~~~~~~~~~l~  345 (361)
                      ++.|++.+.   +++++++++++++++++
T Consensus       290 ~i~g~~~~~---~~~~~~~~~l~~~g~l~  315 (347)
T 1jvb_A          290 QFVGSLVGN---QSDFLGIMRLAEAGKVK  315 (347)
T ss_dssp             EEEECCSCC---HHHHHHHHHHHHTTSSC
T ss_pred             EEEEEeccC---HHHHHHHHHHHHcCCCC
Confidence            999987544   47899999999999884

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=1.4e-51  Score=391.04  Aligned_cols=312  Identities=23%  Similarity=0.337  Sum_probs=261.3

Q ss_pred             cccceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCC
Q 018072            7 LILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDL   86 (361)
Q Consensus         7 ~~~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~   86 (361)
                      ++++|+++++.++++.++++++|.|+|+++||||||.++|||++|++++.|..+...+|.++|||++|+|+++|++|++|
T Consensus         6 ~~m~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~v~~~   85 (357)
T 2cf5_A            6 AERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKF   85 (357)
T ss_dssp             CCCEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHTCTTTCCCSSBCCCCEEEEEEEEECSSCCSC
T ss_pred             CcceeEEEEEccCCCCcEEEEecCCCCCCCEEEEEEEEEeecchhhhhhcCCCCCCCCCeecCcceeEEEEEECCCCCCC
Confidence            47889999998876679999999999999999999999999999999998866555689999999999999999999999


Q ss_pred             CCCCEEeecCC-CCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECC
Q 018072           87 EVGDHVLPVFT-GECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN  165 (361)
Q Consensus        87 ~~Gd~V~~~~~-~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP  165 (361)
                      ++||||++.+. .+|+.|++|+.|++++|.+..+.       ..+..   ..|     ....|+|+||+++|++.++++|
T Consensus        86 ~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~-------~~~~~---~~g-----~~~~G~~aey~~v~~~~~~~~P  150 (357)
T 2cf5_A           86 TVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWS-------YNDVY---ING-----QPTQGGFAKATVVHQKFVVKIP  150 (357)
T ss_dssp             CTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEET-------TTSBC---TTS-----CBCCCSSBSCEEEEGGGEEECC
T ss_pred             CCCCEEEEcCCCCCCCCChHHhCcCcccCCCcccc-------ccccc---cCC-----CCCCCccccEEEechhhEEECc
Confidence            99999987654 48999999999999999754322       00000   000     1123699999999999999999


Q ss_pred             CCCChhhhhccccchhhhhhhhhhhcCCC-CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCCE
Q 018072          166 PLAPLDKVCILSCGVSTGLGATLNVAKPE-RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD  243 (361)
Q Consensus       166 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~-~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~~~  243 (361)
                      +++++++||.+++++.|||+++ ...+++ +|++|||+|+|++|++++|+|+.+|+ +|++++++++|+++++ ++|+++
T Consensus       151 ~~ls~~~aa~l~~~~~ta~~~l-~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~~~~~~~~~~~~~lGa~~  228 (357)
T 2cf5_A          151 EGMAVEQAAPLLCAGVTVYSPL-SHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSNKKREEALQDLGADD  228 (357)
T ss_dssp             SSCCHHHHTGGGTHHHHHHHHH-HHTSTTSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSTTHHHHHHTTSCCSC
T ss_pred             CCCCHHHhhhhhhhHHHHHHHH-HhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHcCCce
Confidence            9999999999999999999986 457788 99999999999999999999999999 8999999999999988 899999


Q ss_pred             EEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeee
Q 018072          244 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFF  323 (361)
Q Consensus       244 vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~  323 (361)
                      ++++.+.     +.+++++ +++|+|||++|.+..++.++++++++ |+++.+|....... .++...+.+++++.|++.
T Consensus       229 vi~~~~~-----~~~~~~~-~g~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~-~~~~~~~~~~~~i~g~~~  300 (357)
T 2cf5_A          229 YVIGSDQ-----AKMSELA-DSLDYVIDTVPVHHALEPYLSLLKLD-GKLILMGVINNPLQ-FLTPLLMLGRKVITGSFI  300 (357)
T ss_dssp             EEETTCH-----HHHHHST-TTEEEEEECCCSCCCSHHHHTTEEEE-EEEEECSCCSSCCC-CCHHHHHHHTCEEEECCS
T ss_pred             eeccccH-----HHHHHhc-CCCCEEEECCCChHHHHHHHHHhccC-CEEEEeCCCCCCcc-ccCHHHHhCccEEEEEcc
Confidence            9987642     2344444 38999999999866889999999997 99999997653322 133333449999999876


Q ss_pred             cCCCcCCcHHHHHHHHHcCCccc
Q 018072          324 GNYKPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~l~~  346 (361)
                      +.   .+++++++++++++++++
T Consensus       301 ~~---~~~~~~~~~l~~~g~l~~  320 (357)
T 2cf5_A          301 GS---MKETEEMLEFCKEKGLSS  320 (357)
T ss_dssp             CC---HHHHHHHHHHHHHTTCCC
T ss_pred             CC---HHHHHHHHHHHHcCCCCC
Confidence            44   468999999999999854

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=1.5e-51  Score=396.33  Aligned_cols=310  Identities=21%  Similarity=0.285  Sum_probs=262.9

Q ss_pred             ceeEEEeecCCCCeEEEEeecCCC-CC-----CeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCC
Q 018072           10 TCKAAVAWEAGKPLIIQDVEVAPP-QA-----MEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGV   83 (361)
Q Consensus        10 ~m~a~~~~~~~~~~~~~~~~~p~~-~~-----~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v   83 (361)
                      +|||+++.+++. ++++++|.|+| ++     +||||||.++|||++|++++.|..+ .++|.++|||++|+|+++|++|
T Consensus         2 ~MkA~~~~~~~~-l~~~~~p~P~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~~~-~~~p~v~GhE~~G~V~~vG~~v   79 (398)
T 2dph_A            2 GNKSVVYHGTRD-LRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFI-VPKGHVLGHEITGEVVEKGSDV   79 (398)
T ss_dssp             CEEEEEEEETTE-EEEEEECCCCSEETTEECTTCEEEEEEEEECCHHHHHHHTTSSC-CCTTCBCCCCEEEEEEEECTTC
T ss_pred             ccEEEEEEcCCC-EEEEEccCCCCCCCcCCCCCeEEEEEEEEeecHHHHHHhcCCCC-CCCCcccCCceEEEEEEECCCC
Confidence            599999999876 99999999998 68     9999999999999999999988643 4679999999999999999999


Q ss_pred             CCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccC-----CcccccccCCCcccccCCCccccccCcccceeeEEEec
Q 018072           84 SDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRIN-----PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHS  158 (361)
Q Consensus        84 ~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~-----~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~  158 (361)
                      ++|++||||++.+..+|+.|++|++|++++|.+....     ..+|..         .       ....|+|+||+++|+
T Consensus        80 ~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~---------~-------~~~~G~~aey~~v~~  143 (398)
T 2dph_A           80 ELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFD---------L-------KGWSGGQAEYVLVPY  143 (398)
T ss_dssp             CSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTT---------B-------SSCCCSSBSEEEESS
T ss_pred             CCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCccccccccccccccc---------c-------CCCCceeeeeEEecc
Confidence            9999999999999999999999999999999872211     011110         0       012369999999998


Q ss_pred             c--ceEECCCCCChhh----hhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhh
Q 018072          159 G--CVAKINPLAPLDK----VCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR  232 (361)
Q Consensus       159 ~--~~~~iP~~~~~~~----aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~  232 (361)
                      +  .++++|+++++++    ||++++++.|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|
T Consensus       144 ~~~~~~~iP~~~~~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~  222 (398)
T 2dph_A          144 ADYMLLKFGDKEQAMEKIKDLTLISDILPTGFHGC-VSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPER  222 (398)
T ss_dssp             HHHHCEECSSHHHHHHTHHHHTTTTTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHH
T ss_pred             ccCeEEECCCCCChhhhcchhhhhcCHHHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHH
Confidence            7  8999999999988    888999999999997 78899999999999999999999999999998789999999999


Q ss_pred             HHHHHHcCCCEEEcCCCCCccH-HHHHHHHcCC-CccEEEEccCChH--------------HHHHHHHHhcCCCcEEEEE
Q 018072          233 FEEAKKFGVTDFVNTSEHDRPI-QEVIAEMTNG-GVDRSVECTGNID--------------NMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       233 ~~~~~~~G~~~vv~~~~~~~~~-~~~i~~~~~~-g~Dvvid~~g~~~--------------~~~~~~~~l~~~~G~iv~~  296 (361)
                      +++++++|++ ++++.+.+  + .+.+++++++ ++|+|||++|++.              .++.++++|+++ |+++++
T Consensus       223 ~~~a~~lGa~-~i~~~~~~--~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~g-G~iv~~  298 (398)
T 2dph_A          223 LKLLSDAGFE-TIDLRNSA--PLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAG-GAIGIP  298 (398)
T ss_dssp             HHHHHTTTCE-EEETTSSS--CHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEE-EEEECC
T ss_pred             HHHHHHcCCc-EEcCCCcc--hHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcC-CEEEEe
Confidence            9999999995 88877654  4 7788888877 8999999999752              689999999997 999999


Q ss_pred             cCCCC-----------CceeecChhhhc-cccEEEEeeecCCCcCCcHHHHHHHHHcCCcc
Q 018072          297 GVPSK-----------DAVFMTKPINVL-NERTLKGTFFGNYKPRTDLPSVVDMYMNKVIR  345 (361)
Q Consensus       297 g~~~~-----------~~~~~~~~~~~~-~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l~  345 (361)
                      |....           .....++...++ |++++.|+...   ..++++++++++++|+++
T Consensus       299 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~---~~~~~~~~~~l~~~g~l~  356 (398)
T 2dph_A          299 GIYVGSDPDPVNKDAGSGRLHLDFGKMWTKSIRIMTGMAP---VTNYNRHLTEAILWDQMP  356 (398)
T ss_dssp             SCCCSCCSSCSSHHHHTTEEEEEHHHHHHTTCEEECSSCC---GGGTHHHHHHHHHTTCCH
T ss_pred             ccccccccccccccccCCcccccHHHHhhcCCEEEEeccC---cHHHHHHHHHHHHcCCCC
Confidence            97621           122344444444 99999886543   257899999999999987

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=100.00  E-value=1e-51  Score=392.13  Aligned_cols=299  Identities=20%  Similarity=0.236  Sum_probs=257.1

Q ss_pred             eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCC---CcccccceeEEEEEeCCCCCCCC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF---PRIFGHEAAGVVESVGEGVSDLE   87 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~---p~~~G~e~~G~V~~~G~~v~~~~   87 (361)
                      |||+++.+++++++++++|.|+|+++||||||.++|||++|++++.|.++..++   |.++|||++| |+++|++ ++|+
T Consensus         1 MkA~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G-V~~vG~~-~~~~   78 (357)
T 2b5w_A            1 MKAIAVKRGEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVLGHEAVG-VVVDPND-TELE   78 (357)
T ss_dssp             CEEEEEETTCSSCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHSCSTTSCTTCSEEECCSEEEE-EEEECTT-SSCC
T ss_pred             CeEEEEeCCCCceEEEECCCCCCCcCEEEEEEeEEeechhcHHHHcCCCCCCCCCCCCcccCceeEE-EEEECCC-CCCC
Confidence            899999999877999999999999999999999999999999999986654556   8999999999 9999999 9999


Q ss_pred             CCCEEeecCCCC--CCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECC
Q 018072           88 VGDHVLPVFTGE--CGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN  165 (361)
Q Consensus        88 ~Gd~V~~~~~~~--c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP  165 (361)
                      +||||++.+..+  |+.|++|++|++++|.+..... .|..                  ...|+|+||+++|++.++++|
T Consensus        79 vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~-~g~~------------------~~~G~~aey~~v~~~~~~~iP  139 (357)
T 2b5w_A           79 EGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFE-RGIV------------------GAHGYMSEFFTSPEKYLVRIP  139 (357)
T ss_dssp             TTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEE-ETTB------------------EECCSCBSEEEEEGGGEEECC
T ss_pred             CCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccc-cCcc------------------CCCcceeeEEEEchHHeEECC
Confidence            999999998888  9999999999999998754320 0110                  012489999999999999999


Q ss_pred             CCCChhhhhccccchhhhhhhhhhhcCCCCC------CEEEEEcCCHHHHHH-HHHH-HHcCCCeEEEEcCChh---hHH
Q 018072          166 PLAPLDKVCILSCGVSTGLGATLNVAKPERG------SSVAVFGLGAVGLAA-AEGA-RIAGASRIIGVDRSSK---RFE  234 (361)
Q Consensus       166 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g------~~VlI~G~g~vG~~a-~~~a-~~~g~~~Vi~~~~~~~---~~~  234 (361)
                      ++++ ++| +++.++.|||+++ +.+++++|      ++|||+|+|++|+++ +|+| +.+|+++|++++++++   |++
T Consensus       140 ~~~~-~~a-al~~~~~ta~~al-~~~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~  216 (357)
T 2b5w_A          140 RSQA-ELG-FLIEPISITEKAL-EHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTID  216 (357)
T ss_dssp             GGGS-TTG-GGHHHHHHHHHHH-HHHHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHH
T ss_pred             CCcc-hhh-hhhchHHHHHHHH-HhcCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHH
Confidence            9999 654 5667999999997 67889999      999999999999999 9999 9999955999999999   999


Q ss_pred             HHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh--
Q 018072          235 EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV--  312 (361)
Q Consensus       235 ~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~--  312 (361)
                      +++++|++++ ++.+.+  +.+ ++++ ++++|+|||++|++..+..++++++++ |+++.+|.... ....++...+  
T Consensus       217 ~~~~lGa~~v-~~~~~~--~~~-i~~~-~gg~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~-~~~~~~~~~~~~  289 (357)
T 2b5w_A          217 IIEELDATYV-DSRQTP--VED-VPDV-YEQMDFIYEATGFPKHAIQSVQALAPN-GVGALLGVPSD-WAFEVDAGAFHR  289 (357)
T ss_dssp             HHHHTTCEEE-ETTTSC--GGG-HHHH-SCCEEEEEECSCCHHHHHHHHHHEEEE-EEEEECCCCCC-CCCCCCHHHHHH
T ss_pred             HHHHcCCccc-CCCccC--HHH-HHHh-CCCCCEEEECCCChHHHHHHHHHHhcC-CEEEEEeCCCC-CCceecHHHHhH
Confidence            9999999998 877655  666 7777 558999999999977899999999997 99999998662 2334444444  


Q ss_pred             ---ccccEEEEeeecCCCcCCcHHHHHHHHHcC--C
Q 018072          313 ---LNERTLKGTFFGNYKPRTDLPSVVDMYMNK--V  343 (361)
Q Consensus       313 ---~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~--~  343 (361)
                         .+++++.|++.+.   ++++++++++++++  +
T Consensus       290 ~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~~~  322 (357)
T 2b5w_A          290 EMVLHNKALVGSVNSH---VEHFEAATVTFTKLPKW  322 (357)
T ss_dssp             HHHHTTCEEEECCCCC---HHHHHHHHHHHHHSCHH
T ss_pred             HHHhCCeEEEEeccCC---HHHHHHHHHHHHhCchh
Confidence               4999999987654   47899999999999  7

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.4e-50  Score=389.72  Aligned_cols=312  Identities=24%  Similarity=0.287  Sum_probs=260.1

Q ss_pred             ceeEEEeecCCCCeEEEEeecCCCC-CCe------EEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCC
Q 018072           10 TCKAAVAWEAGKPLIIQDVEVAPPQ-AME------VRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEG   82 (361)
Q Consensus        10 ~m~a~~~~~~~~~~~~~~~~~p~~~-~~e------vlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~   82 (361)
                      +|||+++.+++. ++++++|.|+|. ++|      |||||.++|||++|++++.|..+ .++|.++|||++|+|+++|++
T Consensus         2 ~Mka~~~~~~~~-l~~~~~p~P~~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~p~v~GhE~~G~V~~vG~~   79 (398)
T 1kol_A            2 GNRGVVYLGSGK-VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT-AQVGLVLGHEITGEVIEKGRD   79 (398)
T ss_dssp             CEEEEEEEETTE-EEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC-CCTTCBCCCCEEEEEEEECTT
T ss_pred             ccEEEEEecCCc-eEEEEecCCCCCCCCcccccceEEEEEEEEeechhhHHHHcCCCC-CCCCcccCcccEEEEEEECCC
Confidence            599999999886 999999999997 898      99999999999999999988543 457899999999999999999


Q ss_pred             CCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCC---cccccccCCCcccccCCCccccccCcccceeeEEEecc
Q 018072           83 VSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINP---VRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG  159 (361)
Q Consensus        83 v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~---~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~  159 (361)
                      |++|++||||++.+..+|+.|++|++|++++|.+.....   .+|..         .      .....|+|+||+++|++
T Consensus        80 v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~---------~------~~~~~G~~aey~~v~~~  144 (398)
T 1kol_A           80 VENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYV---------D------MGDWTGGQAEYVLVPYA  144 (398)
T ss_dssp             CCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCT---------T------SCCBCCCSBSEEEESSH
T ss_pred             CCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeec---------c------CCCCCceeeeEEEecch
Confidence            999999999999999999999999999999998764210   01110         0      00123699999999986


Q ss_pred             --ceEECCCCCChhh----hhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhH
Q 018072          160 --CVAKINPLAPLDK----VCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRF  233 (361)
Q Consensus       160 --~~~~iP~~~~~~~----aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~  233 (361)
                        .++++|+++++++    +|++++++.|||+++ +.+++++|++|||+|+|++|++++|+|+++|+.+|++++++++|+
T Consensus       145 ~~~~~~~P~~~~~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~  223 (398)
T 1kol_A          145 DFNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGA-VTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARL  223 (398)
T ss_dssp             HHHCEECSCHHHHHHTHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHH
T ss_pred             hCeEEECCCCcchhhhcccccccccHHHHHHHHH-HHcCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHH
Confidence              8999999999887    788888999999997 478999999999999999999999999999997899999999999


Q ss_pred             HHHHHcCCCEEEcCCCCCccHHHHHHHHcCC-CccEEEEccCCh---------------HHHHHHHHHhcCCCcEEEEEc
Q 018072          234 EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNI---------------DNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       234 ~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~---------------~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      ++++++|++ ++++...+ .+.+.+++++++ ++|+|||++|++               ..+..++++++++ |+++++|
T Consensus       224 ~~a~~lGa~-~i~~~~~~-~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G~iv~~G  300 (398)
T 1kol_A          224 AHAKAQGFE-IADLSLDT-PLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVA-GKIGIPG  300 (398)
T ss_dssp             HHHHHTTCE-EEETTSSS-CHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEE-EEEEECS
T ss_pred             HHHHHcCCc-EEccCCcc-hHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcC-CEEEEec
Confidence            999999997 77776532 377888888877 899999999985               3789999999997 9999999


Q ss_pred             CCCC-C----------ceeecChhhhc-cccEEEEeeecCCCcCCcHHHHHHHHHcCCcc
Q 018072          298 VPSK-D----------AVFMTKPINVL-NERTLKGTFFGNYKPRTDLPSVVDMYMNKVIR  345 (361)
Q Consensus       298 ~~~~-~----------~~~~~~~~~~~-~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l~  345 (361)
                      .... .          ..+.++...++ +++++.|+...   ..++++++++++++|+++
T Consensus       301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~l~~~g~l~  357 (398)
T 1kol_A          301 LYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQTP---VMKYNRALMQAIMWDRIN  357 (398)
T ss_dssp             CCCSCCTTCSSHHHHTTCCCCCHHHHHHTTCEEEESSCC---HHHHHHHHHHHHHTTSCC
T ss_pred             cccCCcccccccccccccccccHHHHhhcccEEEecccC---hHHHHHHHHHHHHcCCCC
Confidence            7521 1          12233333333 89999876422   245678999999999886

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=100.00  E-value=2.7e-50  Score=383.47  Aligned_cols=311  Identities=22%  Similarity=0.379  Sum_probs=258.5

Q ss_pred             cccceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCC
Q 018072            7 LILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDL   86 (361)
Q Consensus         7 ~~~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~   86 (361)
                      .+++|+++...+.++.++++++|.|+|+++||||||.++|||++|++++.|.++...+|.++|||++|+|+++|++|++|
T Consensus        13 ~~mk~~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~~   92 (366)
T 1yqd_A           13 HPVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGFSMYPLVPGHEIVGEVTEVGSKVKKV   92 (366)
T ss_dssp             SSEEEEEEEECSTTCCEEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHHTSSSCCCSSBCCCCCEEEEEEEECTTCCSC
T ss_pred             CCeeEEEEEEcCCCCCcEEEEccCCCCCCCeEEEEEEEEeechhhHHHHcCCCCCCCCCEecccceEEEEEEECCCCCcC
Confidence            45667777776665569999999999999999999999999999999998866556689999999999999999999999


Q ss_pred             CCCCEEeecCC-CCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECC
Q 018072           87 EVGDHVLPVFT-GECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN  165 (361)
Q Consensus        87 ~~Gd~V~~~~~-~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP  165 (361)
                      ++||||++.+. .+|+.|++|+.|++++|.+.... ..|.. ..|             ....|+|+||+++|++.++++|
T Consensus        93 ~vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~-~~~~~-~~g-------------~~~~G~~aey~~v~~~~~~~~P  157 (366)
T 1yqd_A           93 NVGDKVGVGCLVGACHSCESCANDLENYCPKMILT-YASIY-HDG-------------TITYGGYSNHMVANERYIIRFP  157 (366)
T ss_dssp             CTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEES-SSSBC-TTS-------------CBCCCSSBSEEEEEGGGCEECC
T ss_pred             CCCCEEEEcCCcCCCCCChhhhCcCcccCCccccc-ccccc-cCC-------------CcCCCccccEEEEchhhEEECC
Confidence            99999987654 58999999999999999654322 00100 000             1123699999999999999999


Q ss_pred             CCCChhhhhccccchhhhhhhhhhhcCCC-CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCCE
Q 018072          166 PLAPLDKVCILSCGVSTGLGATLNVAKPE-RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD  243 (361)
Q Consensus       166 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~-~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~~~  243 (361)
                      +++++++||.+++++.|||+++. ..+++ +|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.++ ++|++.
T Consensus       158 ~~ls~~~aa~l~~~~~ta~~al~-~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~lGa~~  235 (366)
T 1yqd_A          158 DNMPLDGGAPLLCAGITVYSPLK-YFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGS-KVTVISTSPSKKEEALKNFGADS  235 (366)
T ss_dssp             TTSCTTTTGGGGTHHHHHHHHHH-HTTCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGHHHHHHTSCCSE
T ss_pred             CCCCHHHhhhhhhhHHHHHHHHH-hcCcCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCCce
Confidence            99999999999999999999964 46788 99999999999999999999999999 8999999999999887 899999


Q ss_pred             EEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEee
Q 018072          244 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTF  322 (361)
Q Consensus       244 vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~  322 (361)
                      ++++.+.     +.+.+++ +++|+|||++|.+..++.++++|+++ |+++.+|......  .++...++ +++++.|++
T Consensus       236 v~~~~~~-----~~~~~~~-~~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~~~~--~~~~~~~~~~~~~i~g~~  306 (366)
T 1yqd_A          236 FLVSRDQ-----EQMQAAA-GTLDGIIDTVSAVHPLLPLFGLLKSH-GKLILVGAPEKPL--ELPAFSLIAGRKIVAGSG  306 (366)
T ss_dssp             EEETTCH-----HHHHHTT-TCEEEEEECCSSCCCSHHHHHHEEEE-EEEEECCCCSSCE--EECHHHHHTTTCEEEECC
T ss_pred             EEeccCH-----HHHHHhh-CCCCEEEECCCcHHHHHHHHHHHhcC-CEEEEEccCCCCC--CcCHHHHHhCCcEEEEec
Confidence            9987642     2444444 38999999999866789999999997 9999999866433  34444444 999999987


Q ss_pred             ecCCCcCCcHHHHHHHHHcCCccc
Q 018072          323 FGNYKPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~~l~~  346 (361)
                      .+.   .+++++++++++++++++
T Consensus       307 ~~~---~~~~~~~~~l~~~g~l~~  327 (366)
T 1yqd_A          307 IGG---MKETQEMIDFAAKHNITA  327 (366)
T ss_dssp             SCC---HHHHHHHHHHHHHTTCCC
T ss_pred             CCC---HHHHHHHHHHHHcCCCCC
Confidence            544   468999999999999865

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=8.9e-49  Score=383.36  Aligned_cols=311  Identities=19%  Similarity=0.201  Sum_probs=263.3

Q ss_pred             ccccceeEEEeecC---------------CCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCC-----------
Q 018072            6 GLILTCKAAVAWEA---------------GKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG-----------   59 (361)
Q Consensus         6 ~~~~~m~a~~~~~~---------------~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~-----------   59 (361)
                      ++|.+|||+++.++               ++.++++++|.|+|+++||||||.++|||++|++...+..           
T Consensus        26 ~iP~tmkA~v~~~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~~~~g  105 (456)
T 3krt_A           26 PLPESYRAITVHKDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYG  105 (456)
T ss_dssp             CCCSCEEEEEEEGGGTTTTTTCCGGGCCHHHHCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHHHHHH
T ss_pred             CCCcceEEEEEeccccccccccccccCCCCCCcEEEEccCCCCCCCeEEEEEEEEEecchhhhhhhcCcccchhhhhhcc
Confidence            47899999999987               2348999999999999999999999999999987643211           


Q ss_pred             ------CCCCCC-cccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCc
Q 018072           60 ------QTPLFP-RIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQS  132 (361)
Q Consensus        60 ------~~~~~p-~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~  132 (361)
                            ...++| .++|||++|+|+++|++|++|++||+|++.+. .|..|..|..+..+.|.+....   |....    
T Consensus       106 ~~~~~~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~-~c~~~~~~~~~~~~~c~~~~~~---G~~~~----  177 (456)
T 3krt_A          106 RVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCL-SVELESSDGHNDTMLDPEQRIW---GFETN----  177 (456)
T ss_dssp             TSCHHHHTTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECCE-ECCCCSGGGTTSGGGCTTCEET---TTTSS----
T ss_pred             ccccccccCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeCC-cccccccccccccccCcccccc---ccCCC----
Confidence                  012467 69999999999999999999999999998654 6888999999999999887665   43211    


Q ss_pred             ccccCCCccccccCcccceeeEEEeccceEECCCCCChhhhhccccchhhhhhhhhhh--cCCCCCCEEEEEcC-CHHHH
Q 018072          133 RFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV--AKPERGSSVAVFGL-GAVGL  209 (361)
Q Consensus       133 ~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~--~~~~~g~~VlI~G~-g~vG~  209 (361)
                                    .|+|+||+++|++.++++|+++++++||++++++.|||+++...  +++++|++|||+|+ |++|+
T Consensus       178 --------------~G~~aey~~v~~~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~  243 (456)
T 3krt_A          178 --------------FGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGS  243 (456)
T ss_dssp             --------------SCSSBSEEEEEGGGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHH
T ss_pred             --------------CCcccceEEechHHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHH
Confidence                          25999999999999999999999999999999999999997654  78999999999998 99999


Q ss_pred             HHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCc---------------cHHHHHHHHcCC-CccEEEEcc
Q 018072          210 AAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR---------------PIQEVIAEMTNG-GVDRSVECT  273 (361)
Q Consensus       210 ~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~---------------~~~~~i~~~~~~-g~Dvvid~~  273 (361)
                      +++|+|+.+|+ +|++++++++|+++++++|++.++++.+.+.               .+.+.+++++++ ++|+|||++
T Consensus       244 ~avqlak~~Ga-~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~  322 (456)
T 3krt_A          244 YATQFALAGGA-NPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHP  322 (456)
T ss_dssp             HHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECS
T ss_pred             HHHHHHHHcCC-eEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcC
Confidence            99999999999 8888889999999999999999999876541               245788888887 999999999


Q ss_pred             CChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhh-hccccEEEEeeecCCCcCCcHHHHHHHHHcCCcc
Q 018072          274 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIR  345 (361)
Q Consensus       274 g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l~  345 (361)
                      |+ +.+..++++++++ |+++.+|..... ...++... +++++++.|++.+.+   .++.++++++++|+++
T Consensus       323 G~-~~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~l~  389 (456)
T 3krt_A          323 GR-ETFGASVFVTRKG-GTITTCASTSGY-MHEYDNRYLWMSLKRIIGSHFANY---REAWEANRLIAKGRIH  389 (456)
T ss_dssp             CH-HHHHHHHHHEEEE-EEEEESCCTTCS-EEEEEHHHHHHTTCEEEECCSCCH---HHHHHHHHHHHTTSSC
T ss_pred             Cc-hhHHHHHHHhhCC-cEEEEEecCCCc-ccccCHHHHHhcCeEEEEeccCCH---HHHHHHHHHHHcCCcc
Confidence            98 8999999999997 999999987632 33333333 348999999987654   5678899999999884

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=1.5e-48  Score=381.11  Aligned_cols=311  Identities=17%  Similarity=0.172  Sum_probs=259.5

Q ss_pred             ccccceeEEEeecCC-------------CCeEEEEeecCCCCCCeEEEEEeEEecCccchhccc----------------
Q 018072            6 GLILTCKAAVAWEAG-------------KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE----------------   56 (361)
Q Consensus         6 ~~~~~m~a~~~~~~~-------------~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~----------------   56 (361)
                      ++|.+|||+++.+++             +.++++++|.|+|+++||||||.++|||++|++...                
T Consensus        20 ~~p~tmkA~v~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~~~~~   99 (447)
T 4a0s_A           20 PVPDTYLALHLRAEDADMFKGVADKDVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQ   99 (447)
T ss_dssp             CCCSEEEEEEEEGGGTTTTTTCSSCCHHHHCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHHHHTT
T ss_pred             CCChhheeeeeeccccccccccccCCCCCCceEEeccCCCCCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhhhccc
Confidence            478999999999998             239999999999999999999999999999975321                


Q ss_pred             cCCC-CCCCC-cccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCccc
Q 018072           57 SKGQ-TPLFP-RIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRF  134 (361)
Q Consensus        57 g~~~-~~~~p-~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~  134 (361)
                      +.+. ...+| .++|||++|+|+++|++|++|++||||++.+...|+.|..| .+..+.|.+....   |+...      
T Consensus       100 g~~~~~~~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~~~-~~~~~~c~~~~~~---G~~~~------  169 (447)
T 4a0s_A          100 GGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPAT-HGDGMLGTEQRAW---GFETN------  169 (447)
T ss_dssp             CGGGGGGCCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSEECCTTSGGG-GTCTTCSTTCEET---TTTSS------
T ss_pred             CccccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEecCcCcCccccc-ccccccccccccc---cccCC------
Confidence            1111 12456 69999999999999999999999999999999888888755 5778999887655   43211      


Q ss_pred             ccCCCccccccCcccceeeEEEeccceEECCCCCChhhhhccccchhhhhhhhhh--hcCCCCCCEEEEEcC-CHHHHHH
Q 018072          135 SINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN--VAKPERGSSVAVFGL-GAVGLAA  211 (361)
Q Consensus       135 ~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~--~~~~~~g~~VlI~G~-g~vG~~a  211 (361)
                                  .|+|+||+++|++.++++|+++++++||++++++.|||+++..  .+++++|++|||+|+ |++|+++
T Consensus       170 ------------~G~~aey~~v~~~~~~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a  237 (447)
T 4a0s_A          170 ------------FGGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYA  237 (447)
T ss_dssp             ------------SCSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHH
T ss_pred             ------------CCceeeeeecCHHHcEECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHH
Confidence                        2489999999999999999999999999999999999999764  488999999999998 9999999


Q ss_pred             HHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCC----------------ccHHHHHHHHcCCCccEEEEccCC
Q 018072          212 AEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD----------------RPIQEVIAEMTNGGVDRSVECTGN  275 (361)
Q Consensus       212 ~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~----------------~~~~~~i~~~~~~g~Dvvid~~g~  275 (361)
                      +|+|+..|+ +|++++++++|+++++++|++.++++.+.+                ..+.+.++++++.++|++||++|+
T Consensus       238 ~qla~~~Ga-~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~  316 (447)
T 4a0s_A          238 IQFVKNGGG-IPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGR  316 (447)
T ss_dssp             HHHHHHTTC-EEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSCH
T ss_pred             HHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHHHHHHhCCCceEEEECCCc
Confidence            999999999 888888999999999999999998865432                113567777774489999999998


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhh-hccccEEEEeeecCCCcCCcHHHHHHHHHcCCcc
Q 018072          276 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIR  345 (361)
Q Consensus       276 ~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l~  345 (361)
                       ..+..++++++++ |+++.+|..... ...++... +++++++.|++.+..   +++.++++++++|+++
T Consensus       317 -~~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~~~~i~g~~~~~~---~~~~~~~~l~~~g~l~  381 (447)
T 4a0s_A          317 -VTFGLSVIVARRG-GTVVTCGSSSGY-LHTFDNRYLWMKLKKIVGSHGANH---EEQQATNRLFESGAVV  381 (447)
T ss_dssp             -HHHHHHHHHSCTT-CEEEESCCTTCS-EEEEEHHHHHHTTCEEEECCSCCH---HHHHHHHHHHHTTSSC
T ss_pred             -hHHHHHHHHHhcC-CEEEEEecCCCc-ccccCHHHHHhCCCEEEecCCCCH---HHHHHHHHHHHcCCcc
Confidence             6889999999998 999999976632 33333333 348999999876553   6788999999999884

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=6.6e-48  Score=365.30  Aligned_cols=286  Identities=19%  Similarity=0.225  Sum_probs=249.2

Q ss_pred             ccccceeEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCC
Q 018072            6 GLILTCKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEG   82 (361)
Q Consensus         6 ~~~~~m~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~   82 (361)
                      ++|.+|||+++.++|.+  +++++.|.|+|+++||||||.++|||++|++++.|.++. ..+|.++|||++|+|+++|++
T Consensus        24 ~~p~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG~~  103 (353)
T 4dup_A           24 SLPQEMRFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPILGLELSGEIVGVGPG  103 (353)
T ss_dssp             CCCSSEEEEEESSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTSSCCCTTSCSSSCCEEEEEEEEECTT
T ss_pred             CCChheeEEEEccCCCccceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCccccccEEEEEEECCC
Confidence            47899999999998765  999999999999999999999999999999999987654 357999999999999999999


Q ss_pred             CCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceE
Q 018072           83 VSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVA  162 (361)
Q Consensus        83 v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~  162 (361)
                      +++|++||+|+...                               .                  .|+|+||+++|++.++
T Consensus       104 v~~~~vGdrV~~~~-------------------------------~------------------~G~~aey~~v~~~~~~  134 (353)
T 4dup_A          104 VSGYAVGDKVCGLA-------------------------------N------------------GGAYAEYCLLPAGQIL  134 (353)
T ss_dssp             CCSCCTTCEEEEEC-------------------------------S------------------SCCSBSEEEEEGGGEE
T ss_pred             CCCCCCCCEEEEec-------------------------------C------------------CCceeeEEEEcHHHcE
Confidence            99999999998432                               1                  2489999999999999


Q ss_pred             ECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCC
Q 018072          163 KINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV  241 (361)
Q Consensus       163 ~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~  241 (361)
                      ++|+++++++||++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|++++++++++++++++|+
T Consensus       135 ~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa  213 (353)
T 4dup_A          135 PFPKGYDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACERLGA  213 (353)
T ss_dssp             ECCTTCCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTC
T ss_pred             eCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCC
Confidence            999999999999999999999999888899999999999965 9999999999999999 89999999999999999999


Q ss_pred             CEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEE
Q 018072          242 TDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKG  320 (361)
Q Consensus       242 ~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g  320 (361)
                      +.++++.+.+  +.+.+++++++++|++||++|+ ..+..++++++++ |+++.+|.........++...++ +++++.|
T Consensus       214 ~~~~~~~~~~--~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~i~g  289 (353)
T 4dup_A          214 KRGINYRSED--FAAVIKAETGQGVDIILDMIGA-AYFERNIASLAKD-GCLSIIAFLGGAVAEKVNLSPIMVKRLTVTG  289 (353)
T ss_dssp             SEEEETTTSC--HHHHHHHHHSSCEEEEEESCCG-GGHHHHHHTEEEE-EEEEECCCTTCSEEEEEECHHHHHTTCEEEE
T ss_pred             CEEEeCCchH--HHHHHHHHhCCCceEEEECCCH-HHHHHHHHHhccC-CEEEEEEecCCCcccCCCHHHHHhcCceEEE
Confidence            9999988766  8888888884499999999998 6889999999997 99999998764432213333344 9999999


Q ss_pred             eeecCCCcCC-------cHHHHHHHHHcCCcc
Q 018072          321 TFFGNYKPRT-------DLPSVVDMYMNKVIR  345 (361)
Q Consensus       321 ~~~~~~~~~~-------~~~~~~~~~~~~~l~  345 (361)
                      ++.+.+...+       .++++++++++|+++
T Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~  321 (353)
T 4dup_A          290 STMRPRTAEEKRAIRDDLLSEVWPLLEAGTVA  321 (353)
T ss_dssp             CCSTTSCHHHHHHHHHHHHHHTHHHHHHTSSC
T ss_pred             EeccccchhhhHHHHHHHHHHHHHHHHCCCcc
Confidence            9876653211       167899999999874

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=100.00  E-value=2.9e-49  Score=376.42  Aligned_cols=299  Identities=19%  Similarity=0.228  Sum_probs=248.9

Q ss_pred             eeEEEeecCCCCeEEEEeecCCCCC-CeEEEEEeEEecCccchhcccc--CCCCCCC---CcccccceeEEEEEeCCCCC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPPQA-MEVRIKIKYTSLCRTDLYFWES--KGQTPLF---PRIFGHEAAGVVESVGEGVS   84 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~~~-~evlVkv~~~~i~~~D~~~~~g--~~~~~~~---p~~~G~e~~G~V~~~G~~v~   84 (361)
                      |||+++.+++++++++++|.|+|++ +||||||.++|||++|++++.|  .++...+   |.++|||++|+|++  ++ +
T Consensus         1 MkA~~~~~~g~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~--~~-~   77 (366)
T 2cdc_A            1 MKAIIVKPPNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDFLVLGHEAIGVVEE--SY-H   77 (366)
T ss_dssp             CEEEEECTTSCCCEEEECCGGGSCCCSSEEEEEEEEEECHHHHHHHTTCC-------CCSCEECCSEEEEEECS--CC-S
T ss_pred             CeEEEEeCCCCceEEEECcCCCCCCCCEEEEEEEEEeeccccHHHHcCCCCCCCCCcCCCCCcCCcceEEEEEe--CC-C
Confidence            8999999998769999999999999 9999999999999999999988  5443456   99999999999999  67 8


Q ss_pred             CCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEEC
Q 018072           85 DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI  164 (361)
Q Consensus        85 ~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~i  164 (361)
                      +|++||||++.+..+|+.|++|++|++++|.+..... .|...                  ..|+|+||+++|++.++++
T Consensus        78 ~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~-~g~~~------------------~~G~~aey~~v~~~~~~~i  138 (366)
T 2cdc_A           78 GFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGE-AGIHK------------------MDGFMREWWYDDPKYLVKI  138 (366)
T ss_dssp             SCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCCEE-ETTBE------------------ECCSCBSEEEECGGGEEEE
T ss_pred             CCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCccc-CCccC------------------CCCceeEEEEechHHeEEC
Confidence            8999999999999999999999999999998754320 01100                  1248999999999999999


Q ss_pred             CCCCChhhhhccccchhhhhhhhh--h--hcCCC--C-------CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh-
Q 018072          165 NPLAPLDKVCILSCGVSTGLGATL--N--VAKPE--R-------GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-  230 (361)
Q Consensus       165 P~~~~~~~aa~l~~~~~ta~~a~~--~--~~~~~--~-------g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~-  230 (361)
                      |++++ ++|+ ++.++.|||+++.  +  .++++  +       |++|||+|+|++|++++|+|+..|+ +|+++++++ 
T Consensus       139 P~~l~-~~Aa-l~~~~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~  215 (366)
T 2cdc_A          139 PKSIE-DIGI-LAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREP  215 (366)
T ss_dssp             CGGGT-TTGG-GHHHHHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCC
T ss_pred             cCCcc-hhhh-hcCcHHHHHHHHHhhhhcccCccccccccccCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCcc
Confidence            99999 8775 5669999999976  4  78888  8       9999999999999999999999999 999999998 


Q ss_pred             --hhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHH-HHHHHHhcCCCcEEEEEcCCCCCceeec
Q 018072          231 --KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNM-ISAFECVHDGWGVAVLVGVPSKDAVFMT  307 (361)
Q Consensus       231 --~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~-~~~~~~l~~~~G~iv~~g~~~~~~~~~~  307 (361)
                        +++++++++|++.+ + .+ +  +.+.+.+ +.+++|++||++|.+..+ +.+++.|+++ |+++.+|..... ...+
T Consensus       216 ~~~~~~~~~~~ga~~v-~-~~-~--~~~~~~~-~~~~~d~vid~~g~~~~~~~~~~~~l~~~-G~iv~~g~~~~~-~~~~  287 (366)
T 2cdc_A          216 TEVEQTVIEETKTNYY-N-SS-N--GYDKLKD-SVGKFDVIIDATGADVNILGNVIPLLGRN-GVLGLFGFSTSG-SVPL  287 (366)
T ss_dssp             CHHHHHHHHHHTCEEE-E-CT-T--CSHHHHH-HHCCEEEEEECCCCCTHHHHHHGGGEEEE-EEEEECSCCCSC-EEEE
T ss_pred             chHHHHHHHHhCCcee-c-hH-H--HHHHHHH-hCCCCCEEEECCCChHHHHHHHHHHHhcC-CEEEEEecCCCC-cccc
Confidence              99999999999988 7 54 3  5556655 446899999999997788 9999999997 999999986643 2334


Q ss_pred             Chhh----hccccEEEEeeecCCCcCCcHHHHHHHHHcCCcc
Q 018072          308 KPIN----VLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVIR  345 (361)
Q Consensus       308 ~~~~----~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l~  345 (361)
                      +...    +.+++++.|++.+.   +++++++++++++|+++
T Consensus       288 ~~~~~~~~~~~~~~i~g~~~~~---~~~~~~~~~l~~~g~i~  326 (366)
T 2cdc_A          288 DYKTLQEIVHTNKTIIGLVNGQ---KPHFQQAVVHLASWKTL  326 (366)
T ss_dssp             EHHHHHHHHHTTCEEEECCCCC---HHHHHHHHHHHHHHHHH
T ss_pred             ChhhhHHHHhcCcEEEEecCCC---HHHHHHHHHHHHcCCCC
Confidence            4443    34999999987543   47899999999998854

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=1.1e-47  Score=362.22  Aligned_cols=282  Identities=23%  Similarity=0.261  Sum_probs=240.2

Q ss_pred             cccccceeEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCC
Q 018072            5 AGLILTCKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGE   81 (361)
Q Consensus         5 ~~~~~~m~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~   81 (361)
                      ..+|.+|||+++.+++.+  ++++++|.|+|+++||||||.++|||++|++++.|.++. ..+|.++|||++|+|+++|+
T Consensus        16 ~~~p~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~   95 (342)
T 4eye_A           16 TQGPGSMKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEPPFVPGIETAGVVRSAPE   95 (342)
T ss_dssp             --CCCEEEEEEECSSSGGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSSSCCCSSBCCCSEEEEEEEECCT
T ss_pred             ccCCcceEEEEEecCCCCceeEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCccceeEEEEEEEECC
Confidence            347899999999987766  999999999999999999999999999999999987653 46899999999999999999


Q ss_pred             CCCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccce
Q 018072           82 GVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCV  161 (361)
Q Consensus        82 ~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~  161 (361)
                      +++ |++||||+....                                                 .|+|+||+++|++.+
T Consensus        96 ~v~-~~vGDrV~~~~~-------------------------------------------------~G~~aey~~v~~~~~  125 (342)
T 4eye_A           96 GSG-IKPGDRVMAFNF-------------------------------------------------IGGYAERVAVAPSNI  125 (342)
T ss_dssp             TSS-CCTTCEEEEECS-------------------------------------------------SCCSBSEEEECGGGE
T ss_pred             CCC-CCCCCEEEEecC-------------------------------------------------CCcceEEEEEcHHHe
Confidence            999 999999985421                                                 248999999999999


Q ss_pred             EECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcC
Q 018072          162 AKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG  240 (361)
Q Consensus       162 ~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G  240 (361)
                      +++|+++++++||++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|++++++++++++++++|
T Consensus       126 ~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~g  204 (342)
T 4eye_A          126 LPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSVG  204 (342)
T ss_dssp             EECCTTSCHHHHHHHTTHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHT
T ss_pred             EECCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcC
Confidence            9999999999999999999999999878899999999999998 9999999999999999 9999999999999999999


Q ss_pred             CCEEEcCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCC-ceeecChhhhccccEE
Q 018072          241 VTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD-AVFMTKPINVLNERTL  318 (361)
Q Consensus       241 ~~~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~-~~~~~~~~~~~~~~~l  318 (361)
                      ++.++++. .+  +.+.+++++++ ++|++||++|+ ..+..++++++++ |+++.+|..... ..+++. ..+.+++++
T Consensus       205 a~~v~~~~-~~--~~~~v~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~-~~~~~~~~i  278 (342)
T 4eye_A          205 ADIVLPLE-EG--WAKAVREATGGAGVDMVVDPIGG-PAFDDAVRTLASE-GRLLVVGFAAGGIPTIKVN-RLLLRNASL  278 (342)
T ss_dssp             CSEEEESS-TT--HHHHHHHHTTTSCEEEEEESCC---CHHHHHHTEEEE-EEEEEC----------CCC-CGGGTTCEE
T ss_pred             CcEEecCc-hh--HHHHHHHHhCCCCceEEEECCch-hHHHHHHHhhcCC-CEEEEEEccCCCCCccCHH-HHhhcCCEE
Confidence            99999887 44  88899999888 99999999998 6889999999997 999999976533 223322 224499999


Q ss_pred             EEeeecCCC--c----CCcHHHHHHHHHcCCc
Q 018072          319 KGTFFGNYK--P----RTDLPSVVDMYMNKVI  344 (361)
Q Consensus       319 ~g~~~~~~~--~----~~~~~~~~~~~~~~~l  344 (361)
                      .|+..+.+.  .    .++++++++++++| +
T Consensus       279 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g-l  309 (342)
T 4eye_A          279 IGVAWGEFLRTHADYLYETQAGLEKLVAEG-M  309 (342)
T ss_dssp             EECCHHHHHHHCTTHHHHHHHHHHHHHHTT-C
T ss_pred             EEEehhhhhhcCHHHHHHHHHHHHHHHHcC-C
Confidence            999865431  1    24578899999988 5

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=4.4e-47  Score=357.03  Aligned_cols=284  Identities=26%  Similarity=0.332  Sum_probs=248.2

Q ss_pred             ccccceeEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCC
Q 018072            6 GLILTCKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGV   83 (361)
Q Consensus         6 ~~~~~m~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v   83 (361)
                      ++|.+|||+++.+++++  +++++.|.|+|+++||||||.++|||++|++++.|.++ .++|.++|||++|+|+++|+++
T Consensus         4 ~~p~~mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~-~~~P~i~G~e~~G~V~~vG~~v   82 (334)
T 3qwb_A            4 TIPEQQKVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYP-CEKPYVLGREASGTVVAKGKGV   82 (334)
T ss_dssp             -CCSEEEEEEESSSSSGGGEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHHTSSC-CCSSEECCSEEEEEEEEECTTC
T ss_pred             CCchheEEEEEecCCCCceeEEEeccCCCCCCCEEEEEEEEEecCHHHHHHHCCCCC-CCCCCccccceEEEEEEECCCC
Confidence            46899999999998876  89999999999999999999999999999999988665 4579999999999999999999


Q ss_pred             CCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEe-ccceE
Q 018072           84 SDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVH-SGCVA  162 (361)
Q Consensus        84 ~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~-~~~~~  162 (361)
                      ++|++||||++..                                                  .|+|+||+++| .+.++
T Consensus        83 ~~~~~GdrV~~~~--------------------------------------------------~G~~aey~~v~~~~~~~  112 (334)
T 3qwb_A           83 TNFEVGDQVAYIS--------------------------------------------------NSTFAQYSKISSQGPVM  112 (334)
T ss_dssp             CSCCTTCEEEEEC--------------------------------------------------SSCSBSEEEEETTSSEE
T ss_pred             CCCCCCCEEEEee--------------------------------------------------CCcceEEEEecCcceEE
Confidence            9999999998531                                                  24899999999 99999


Q ss_pred             ECCCCCChhh---hhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH
Q 018072          163 KINPLAPLDK---VCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK  238 (361)
Q Consensus       163 ~iP~~~~~~~---aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~  238 (361)
                      ++|+++++++   |+++++++.|||+++.+..++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++++++++
T Consensus       113 ~~P~~~~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~  191 (334)
T 3qwb_A          113 KLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLKIAKE  191 (334)
T ss_dssp             ECCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH
T ss_pred             ECCCCCCHHHhhhhhhhhhHHHHHHHHHHHhccCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence            9999999999   88888899999999888889999999999995 9999999999999999 99999999999999999


Q ss_pred             cCCCEEEcCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-ccc
Q 018072          239 FGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NER  316 (361)
Q Consensus       239 ~G~~~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~  316 (361)
                      +|++.++++.+.+  +.+.+.+++++ ++|++||++|+ ..++.++++++++ |+++.+|..... ...++...++ |++
T Consensus       192 ~ga~~~~~~~~~~--~~~~~~~~~~~~g~D~vid~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~~~  266 (334)
T 3qwb_A          192 YGAEYLINASKED--ILRQVLKFTNGKGVDASFDSVGK-DTFEISLAALKRK-GVFVSFGNASGL-IPPFSITRLSPKNI  266 (334)
T ss_dssp             TTCSEEEETTTSC--HHHHHHHHTTTSCEEEEEECCGG-GGHHHHHHHEEEE-EEEEECCCTTCC-CCCBCGGGGTTTTC
T ss_pred             cCCcEEEeCCCch--HHHHHHHHhCCCCceEEEECCCh-HHHHHHHHHhccC-CEEEEEcCCCCC-CCCcchhhhhhCce
Confidence            9999999988766  88899998877 99999999998 7899999999998 999999986633 2233333343 999


Q ss_pred             EEEEeeecCCC-cCCc----HHHHHHHHHcCCccc
Q 018072          317 TLKGTFFGNYK-PRTD----LPSVVDMYMNKVIRF  346 (361)
Q Consensus       317 ~l~g~~~~~~~-~~~~----~~~~~~~~~~~~l~~  346 (361)
                      ++.+++.+.+. .+++    ++++++++++|++++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~  301 (334)
T 3qwb_A          267 TLVRPQLYGYIADPEEWKYYSDEFFGLVNSKKLNI  301 (334)
T ss_dssp             EEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSSCC
T ss_pred             EEEEEEeccccCCHHHHHHHHHHHHHHHHCCCccC
Confidence            99987765542 2233    368899999999854

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=4.4e-47  Score=361.91  Aligned_cols=293  Identities=17%  Similarity=0.164  Sum_probs=240.9

Q ss_pred             ccccceeEEEeecCCCCeEEE-EeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCC
Q 018072            6 GLILTCKAAVAWEAGKPLIIQ-DVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVS   84 (361)
Q Consensus         6 ~~~~~m~a~~~~~~~~~~~~~-~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~   84 (361)
                      ++|.+|||+++.++++ ++++ ++|.|+|+++||||||.++|||++|++++.+.   ..+|.++|||++|+|+++|++++
T Consensus         7 ~~p~~mkA~v~~~~~~-l~~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~---~~~p~v~G~e~~G~V~~vG~~v~   82 (371)
T 3gqv_A            7 IPPPQQTALTVNDHDE-VTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQF---ATPWAFLGTDYAGTVVAVGSDVT   82 (371)
T ss_dssp             CCCSCEEEEEECTTSC-EEEEEEECCCCCCTTSEEEEEEEEECCGGGGC--------CCTTSCCCSEEEEEEEEECTTCC
T ss_pred             CCchhceeEEEcCCCc-eEEeccCCCCCCCCCEEEEEEEEEEcCHHHHHHhhcC---CCCCccCccccEEEEEEeCCCCC
Confidence            4788999999999987 9998 99999999999999999999999999998763   34689999999999999999999


Q ss_pred             CCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEEC
Q 018072           85 DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI  164 (361)
Q Consensus        85 ~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~i  164 (361)
                      +|++||||+..       |..|..+.                                  ...|+|+||+++|++.++++
T Consensus        83 ~~~~GdrV~~~-------~~~~~~~~----------------------------------~~~G~~aey~~v~~~~~~~~  121 (371)
T 3gqv_A           83 HIQVGDRVYGA-------QNEMCPRT----------------------------------PDQGAFSQYTVTRGRVWAKI  121 (371)
T ss_dssp             SCCTTCEEEEE-------CCTTCTTC----------------------------------TTCCSSBSEEECCTTCEEEC
T ss_pred             CCCCCCEEEEe-------ccCCCCCC----------------------------------CCCCcCcCeEEEchhheEEC
Confidence            99999999643       44443221                                  11248999999999999999


Q ss_pred             CCCCChhhhhccccchhhhhhhhhhh-cCC-----------CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChh
Q 018072          165 NPLAPLDKVCILSCGVSTGLGATLNV-AKP-----------ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK  231 (361)
Q Consensus       165 P~~~~~~~aa~l~~~~~ta~~a~~~~-~~~-----------~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~  231 (361)
                      |+++++++||++++++.|||+++.+. .++           ++|++|||+|+ |++|++++|+|+.+|+ +|+++. +++
T Consensus       122 P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga-~Vi~~~-~~~  199 (371)
T 3gqv_A          122 PKGLSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGY-IPIATC-SPH  199 (371)
T ss_dssp             CTTCCHHHHHTSHHHHHHHHHHHHHHTCCCCCSSCSSCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEE-CGG
T ss_pred             CCCCCHHHHhhhhhhHHHHHHHHHhhccCCCCCccccccccCCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEe-CHH
Confidence            99999999999999999999998777 553           89999999998 9999999999999999 888885 789


Q ss_pred             hHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHh-cCCCcEEEEEcCCCCC------ce
Q 018072          232 RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECV-HDGWGVAVLVGVPSKD------AV  304 (361)
Q Consensus       232 ~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l-~~~~G~iv~~g~~~~~------~~  304 (361)
                      |+++++++|+++++++.+.+  +.+.+++++++++|++||++|++..++.++++| +++ |+++.+|.....      ..
T Consensus       200 ~~~~~~~lGa~~vi~~~~~~--~~~~v~~~t~g~~d~v~d~~g~~~~~~~~~~~l~~~~-G~iv~~g~~~~~~~~~~~~~  276 (371)
T 3gqv_A          200 NFDLAKSRGAEEVFDYRAPN--LAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAG-GHYVSLNPFPEHAATRKMVT  276 (371)
T ss_dssp             GHHHHHHTTCSEEEETTSTT--HHHHHHHHTTTCCCEEEESSCSHHHHHHHHHHSCTTC-EEEEESSCCCC---CCSCEE
T ss_pred             HHHHHHHcCCcEEEECCCch--HHHHHHHHccCCccEEEECCCchHHHHHHHHHhhcCC-CEEEEEecCccccccccccc
Confidence            99999999999999998776  889999999888999999999988999999999 587 999999965421      22


Q ss_pred             eecC--hhhhccccEEEEeeecCCCc------CCcHHHHHHHHHcCCcccCC
Q 018072          305 FMTK--PINVLNERTLKGTFFGNYKP------RTDLPSVVDMYMNKVIRFSS  348 (361)
Q Consensus       305 ~~~~--~~~~~~~~~l~g~~~~~~~~------~~~~~~~~~~~~~~~l~~~~  348 (361)
                      ....  ...+.|++++.|++......      .+.++++++++++|++++..
T Consensus       277 ~~~~~~~~~~~k~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~  328 (371)
T 3gqv_A          277 TDWTLGPTIFGEGSTWPAPYGRPGSEEERQFGEDLWRIAGQLVEDGRLVHHP  328 (371)
T ss_dssp             EEECCGGGGGTSCBSCSTTTCBCCCHHHHHHHHHHHHHHHHHHHTTSSCCCC
T ss_pred             eeeeeeeeeccccccccccccccccHHHHHHHHHHHHHHHHHHHCCeeeCCc
Confidence            2221  12233899998875443211      11235788999999997653

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=3.8e-47  Score=358.68  Aligned_cols=284  Identities=21%  Similarity=0.248  Sum_probs=242.0

Q ss_pred             cccceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC--CCCCcccccceeEEEEEeCCCCC
Q 018072            7 LILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT--PLFPRIFGHEAAGVVESVGEGVS   84 (361)
Q Consensus         7 ~~~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~--~~~p~~~G~e~~G~V~~~G~~v~   84 (361)
                      .|.+|||+++.+++++++++++|.|+|+++||||||.++|||++|++++.|..+.  .++|.++|||++|+|+++|++++
T Consensus         4 ~~~~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~P~v~G~E~~G~V~~vG~~v~   83 (343)
T 3gaz_A            4 TTPTMIAAVVEEANGPFVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGMDLAGTVVAVGPEVD   83 (343)
T ss_dssp             --CEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCCGGGCCCSSBCCCCEEEEEEEEECTTCC
T ss_pred             CchhheEEEEecCCCceEEEeccCCCCCCCEEEEEEEEEEeCHhhHHHhCCCCCCCCCCCCcccCcceEEEEEEECCCCC
Confidence            4788999999999988999999999999999999999999999999999886432  56899999999999999999999


Q ss_pred             CCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEEC
Q 018072           85 DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI  164 (361)
Q Consensus        85 ~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~i  164 (361)
                      +|++||+|+....                          |..                  ...|+|+||+++|++.++++
T Consensus        84 ~~~vGdrV~~~~~--------------------------g~~------------------~~~G~~aey~~v~~~~~~~~  119 (343)
T 3gaz_A           84 SFRVGDAVFGLTG--------------------------GVG------------------GLQGTHAQFAAVDARLLASK  119 (343)
T ss_dssp             SCCTTCEEEEECC--------------------------SST------------------TCCCSSBSEEEEEGGGEEEC
T ss_pred             CCCCCCEEEEEeC--------------------------CCC------------------CCCcceeeEEEecHHHeeeC
Confidence            9999999985321                          100                  01248999999999999999


Q ss_pred             CCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCE
Q 018072          165 NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD  243 (361)
Q Consensus       165 P~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~  243 (361)
                      |+++++++||++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++ ++++++++++++|++.
T Consensus       120 P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga-~Vi~~-~~~~~~~~~~~lGa~~  197 (343)
T 3gaz_A          120 PAALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGA-RVFAT-ARGSDLEYVRDLGATP  197 (343)
T ss_dssp             CTTSCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE-ECHHHHHHHHHHTSEE
T ss_pred             CCCCCHHHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHHcCCCE
Confidence            9999999999999999999999878899999999999995 9999999999999999 89999 8899999999999998


Q ss_pred             EEcCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEee
Q 018072          244 FVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTF  322 (361)
Q Consensus       244 vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~  322 (361)
                       ++ ...+  +.+.+++.+++ ++|++||++|+ +.+..++++|+++ |+++.+|...   .++.. ..+++++++.|++
T Consensus       198 -i~-~~~~--~~~~~~~~~~~~g~D~vid~~g~-~~~~~~~~~l~~~-G~iv~~g~~~---~~~~~-~~~~~~~~~~g~~  267 (343)
T 3gaz_A          198 -ID-ASRE--PEDYAAEHTAGQGFDLVYDTLGG-PVLDASFSAVKRF-GHVVSCLGWG---THKLA-PLSFKQATYSGVF  267 (343)
T ss_dssp             -EE-TTSC--HHHHHHHHHTTSCEEEEEESSCT-HHHHHHHHHEEEE-EEEEESCCCS---CCCCH-HHHHTTCEEEECC
T ss_pred             -ec-cCCC--HHHHHHHHhcCCCceEEEECCCc-HHHHHHHHHHhcC-CeEEEEcccC---ccccc-hhhhcCcEEEEEE
Confidence             77 4444  88888888887 99999999998 7889999999997 9999998765   22221 2234999999976


Q ss_pred             ecCC--------CcCCcHHHHHHHHHcCCccc
Q 018072          323 FGNY--------KPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       323 ~~~~--------~~~~~~~~~~~~~~~~~l~~  346 (361)
                      ....        ...++++++++++++|+++.
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~  299 (343)
T 3gaz_A          268 TLHTLLANEGLAHFGEMLREADALVQTGKLAP  299 (343)
T ss_dssp             TTHHHHHTCSHHHHHHHHHHHHHHHHTTCCCC
T ss_pred             eccchhcccchHHHHHHHHHHHHHHHCCCccc
Confidence            4321        01256889999999998864

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=5.1e-47  Score=357.45  Aligned_cols=284  Identities=23%  Similarity=0.266  Sum_probs=243.1

Q ss_pred             cceeEEEeecCCCC---eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCC
Q 018072            9 LTCKAAVAWEAGKP---LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVS   84 (361)
Q Consensus         9 ~~m~a~~~~~~~~~---~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~   84 (361)
                      ++|||+++.++|++   ++++++|.|+|+++||||||.++|||++|++++.|.++. .++|.++|||++|+|+++|++++
T Consensus         3 ~~mka~~~~~~g~p~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG~~v~   82 (340)
T 3gms_A            3 LHGKLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNIPGYEGVGIVENVGAFVS   82 (340)
T ss_dssp             CEEEEEEESSCSCHHHHEEEEEEECCCCCTTEEEEEEEEEECCHHHHGGGGTTTTTTSCSSBCCCSCCEEEEEEECTTSC
T ss_pred             cccEEEEEecCCCchheEEEEecCCCCCCCCEEEEEEEEecCCHHHHHHhcCCCCCCCCCCCcCCcceEEEEEEeCCCCC
Confidence            57999999999987   899999999999999999999999999999999987654 47899999999999999999999


Q ss_pred             CCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEEC
Q 018072           85 DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI  164 (361)
Q Consensus        85 ~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~i  164 (361)
                      +|++||+|+...                                                 ..|+|+||+++|++.++++
T Consensus        83 ~~~vGdrV~~~~-------------------------------------------------~~G~~aey~~v~~~~~~~v  113 (340)
T 3gms_A           83 RELIGKRVLPLR-------------------------------------------------GEGTWQEYVKTSADFVVPI  113 (340)
T ss_dssp             GGGTTCEEEECS-------------------------------------------------SSCSSBSEEEEEGGGEEEC
T ss_pred             CCCCCCEEEecC-------------------------------------------------CCccceeEEEcCHHHeEEC
Confidence            999999998431                                                 1248999999999999999


Q ss_pred             CCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCE
Q 018072          165 NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD  243 (361)
Q Consensus       165 P~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~  243 (361)
                      |+++++++||++++...|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|++++++++++++++++|+++
T Consensus       114 P~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lga~~  192 (340)
T 3gms_A          114 PDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRLGAAY  192 (340)
T ss_dssp             CTTSCHHHHTTSSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSE
T ss_pred             CCCCCHHHHhhhcchHHHHHHHHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhCCCcE
Confidence            9999999999999999999999889999999999999998 5999999999999999 9999999999999999999999


Q ss_pred             EEcCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEee
Q 018072          244 FVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTF  322 (361)
Q Consensus       244 vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~  322 (361)
                      ++++.+.+  +.+.+++++++ ++|++||++|++. ...++++|+++ |+++.+|.... ..+++........+.+..++
T Consensus       193 ~~~~~~~~--~~~~~~~~~~~~g~Dvvid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~~~~~~  267 (340)
T 3gms_A          193 VIDTSTAP--LYETVMELTNGIGADAAIDSIGGPD-GNELAFSLRPN-GHFLTIGLLSG-IQVNWAEIVTKAKVHANIFH  267 (340)
T ss_dssp             EEETTTSC--HHHHHHHHTTTSCEEEEEESSCHHH-HHHHHHTEEEE-EEEEECCCTTS-CCCCHHHHHHTSCCEEEECC
T ss_pred             EEeCCccc--HHHHHHHHhCCCCCcEEEECCCChh-HHHHHHHhcCC-CEEEEEeecCC-CCCCHHHhhhcccceEEEEE
Confidence            99987766  88899999887 9999999999854 45667999997 99999998653 23332221112455555544


Q ss_pred             ecCC-------CcCCcHHHHHHHHHcCCcccC
Q 018072          323 FGNY-------KPRTDLPSVVDMYMNKVIRFS  347 (361)
Q Consensus       323 ~~~~-------~~~~~~~~~~~~~~~~~l~~~  347 (361)
                      ...+       ..+++++++++++++|++++.
T Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~  299 (340)
T 3gms_A          268 LRHWNDEVSPYKWQETFRHLIRLVENEQLRFM  299 (340)
T ss_dssp             HHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCC
T ss_pred             ehhhhhhcCHHHHHHHHHHHHHHHHcCCCccc
Confidence            3221       124678999999999999764

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=1.6e-46  Score=351.98  Aligned_cols=283  Identities=23%  Similarity=0.304  Sum_probs=246.3

Q ss_pred             eeEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 018072           11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV   88 (361)
Q Consensus        11 m~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~   88 (361)
                      |||+++.++|++  +++++.|.|+|+++||+|||.++|||++|++++.|.++..++|.++|||++|+|+++|+++++|++
T Consensus         2 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~~   81 (325)
T 3jyn_A            2 AKRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGLGAEGAGVVEAVGDEVTRFKV   81 (325)
T ss_dssp             EEEEEBSSCSSGGGCEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCCCEEEEEEEECTTCCSCCT
T ss_pred             cEEEEEecCCCcceeEEeecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCceeEEEEEEECCCCCCCCC
Confidence            999999998876  899999999999999999999999999999999998776678999999999999999999999999


Q ss_pred             CCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCC
Q 018072           89 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA  168 (361)
Q Consensus        89 Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~  168 (361)
                      ||+|+..+.                              .                  .|+|+||+++|++.++++|+++
T Consensus        82 GdrV~~~~~------------------------------~------------------~G~~aey~~v~~~~~~~~P~~~  113 (325)
T 3jyn_A           82 GDRVAYGTG------------------------------P------------------LGAYSEVHVLPEANLVKLADSV  113 (325)
T ss_dssp             TCEEEESSS------------------------------S------------------SCCSBSEEEEEGGGEEECCTTS
T ss_pred             CCEEEEecC------------------------------C------------------CccccceEEecHHHeEECCCCC
Confidence            999985321                              1                  2489999999999999999999


Q ss_pred             ChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcC
Q 018072          169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  247 (361)
Q Consensus       169 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~  247 (361)
                      ++++||++++...|+|+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|++++++++++++++++|+++++++
T Consensus       114 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~~  192 (325)
T 3jyn_A          114 SFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKALGAWETIDY  192 (325)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEET
T ss_pred             CHHHHhhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEeC
Confidence            999999999999999999888899999999999995 9999999999999999 99999999999999999999999998


Q ss_pred             CCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-c-ccEEEEeeec
Q 018072          248 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-N-ERTLKGTFFG  324 (361)
Q Consensus       248 ~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~-~~~l~g~~~~  324 (361)
                      .+.+  +.+.+.+++++ ++|++||++|+ +.+..++++++++ |+++.+|...... ..++...++ + ++.+.+..++
T Consensus       193 ~~~~--~~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~  267 (325)
T 3jyn_A          193 SHED--VAKRVLELTDGKKCPVVYDGVGQ-DTWLTSLDSVAPR-GLVVSFGNASGPV-SGVNLGILAQKDSVYVTRPTLG  267 (325)
T ss_dssp             TTSC--HHHHHHHHTTTCCEEEEEESSCG-GGHHHHHTTEEEE-EEEEECCCTTCCC-CSCCTHHHHHTTSCEEECCCHH
T ss_pred             CCcc--HHHHHHHHhCCCCceEEEECCCh-HHHHHHHHHhcCC-CEEEEEecCCCCC-CCCCHHHHhhcCcEEEEeeeee
Confidence            8766  88899999887 99999999998 7899999999998 9999999876432 223333333 5 6777665543


Q ss_pred             CCC-cCCcH----HHHHHHHHcCCcccC
Q 018072          325 NYK-PRTDL----PSVVDMYMNKVIRFS  347 (361)
Q Consensus       325 ~~~-~~~~~----~~~~~~~~~~~l~~~  347 (361)
                      ++. +++++    +++++++++|++++.
T Consensus       268 ~~~~~~~~~~~~~~~~~~l~~~g~l~~~  295 (325)
T 3jyn_A          268 SYANNAQNLQTMADELFDMLASGKLKVD  295 (325)
T ss_dssp             HHSCSTTHHHHHHHHHHHHHHTTSSCCC
T ss_pred             eecCCHHHHHHHHHHHHHHHHCCCeeCc
Confidence            332 23445    478999999999764

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=1.3e-46  Score=357.53  Aligned_cols=284  Identities=17%  Similarity=0.183  Sum_probs=241.7

Q ss_pred             cccceeEEEeecC---CCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCC
Q 018072            7 LILTCKAAVAWEA---GKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGE   81 (361)
Q Consensus         7 ~~~~m~a~~~~~~---~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~   81 (361)
                      .|++|||+++.++   +.+  ++++++|.|+|+++||+|||.++|||++|++++.|..+...+|.++|||++|+|+++|+
T Consensus        19 ~m~~MkA~~~~~~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~   98 (363)
T 4dvj_A           19 YFQSMKAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDGTDWKVIGYDAAGIVSAVGP   98 (363)
T ss_dssp             CCCEEEEEEBSSCCCTTSTTSSEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCCC--CCSBCCCCCEEEEEEEECT
T ss_pred             hhheeEEEEEeccCCCCCCceEEEeecCCCCCCCCEEEEEEEEEEeCHHHHHHHcCCCCCCCCCCcccceeEEEEEEeCC
Confidence            5788999999876   222  99999999999999999999999999999999999877678899999999999999999


Q ss_pred             CCCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccce
Q 018072           82 GVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCV  161 (361)
Q Consensus        82 ~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~  161 (361)
                      ++++|++||+|+..+.                                              ....|+|+||+++|++.+
T Consensus        99 ~v~~~~vGdrV~~~~~----------------------------------------------~~~~G~~aey~~v~~~~~  132 (363)
T 4dvj_A           99 DVTLFRPGDEVFYAGS----------------------------------------------IIRPGTNAEFHLVDERIV  132 (363)
T ss_dssp             TCCSCCTTCEEEECCC----------------------------------------------TTSCCSCBSEEEEEGGGC
T ss_pred             CCCCCCCCCEEEEccC----------------------------------------------CCCCccceEEEEeCHHHe
Confidence            9999999999985321                                              011248999999999999


Q ss_pred             EECCCCCChhhhhccccchhhhhhhhhhhcCCC-----CCCEEEEEc-CCHHHHHHHHHHHHc-CCCeEEEEcCChhhHH
Q 018072          162 AKINPLAPLDKVCILSCGVSTGLGATLNVAKPE-----RGSSVAVFG-LGAVGLAAAEGARIA-GASRIIGVDRSSKRFE  234 (361)
Q Consensus       162 ~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~-----~g~~VlI~G-~g~vG~~a~~~a~~~-g~~~Vi~~~~~~~~~~  234 (361)
                      +++|+++++++||++++++.|||+++.+.++++     +|++|||+| +|++|++++|+|+.+ |+ +|++++++++|++
T Consensus       133 ~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~-~Vi~~~~~~~~~~  211 (363)
T 4dvj_A          133 GRKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDL-TVIATASRPETQE  211 (363)
T ss_dssp             EECCTTSCHHHHHTSHHHHHHHHHHHHTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCS-EEEEECSSHHHHH
T ss_pred             eECCCCCCHHHHHhhhhHHHHHHHHHHHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCC-EEEEEeCCHHHHH
Confidence            999999999999999999999999988888888     999999998 599999999999985 66 9999999999999


Q ss_pred             HHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-
Q 018072          235 EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-  313 (361)
Q Consensus       235 ~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-  313 (361)
                      +++++|+++++++.+ +  +.+.++++.++++|+|||++|++..++.++++++++ |+++.+|...   .++  ...++ 
T Consensus       212 ~~~~lGad~vi~~~~-~--~~~~v~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~---~~~--~~~~~~  282 (363)
T 4dvj_A          212 WVKSLGAHHVIDHSK-P--LAAEVAALGLGAPAFVFSTTHTDKHAAEIADLIAPQ-GRFCLIDDPS---AFD--IMLFKR  282 (363)
T ss_dssp             HHHHTTCSEEECTTS-C--HHHHHHTTCSCCEEEEEECSCHHHHHHHHHHHSCTT-CEEEECSCCS---SCC--GGGGTT
T ss_pred             HHHHcCCCEEEeCCC-C--HHHHHHHhcCCCceEEEECCCchhhHHHHHHHhcCC-CEEEEECCCC---ccc--hHHHhh
Confidence            999999999999864 3  778888875459999999999978999999999998 9999996432   333  33344 


Q ss_pred             cccEEEEeeecCC-----Cc----CCcHHHHHHHHHcCCccc
Q 018072          314 NERTLKGTFFGNY-----KP----RTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       314 ~~~~l~g~~~~~~-----~~----~~~~~~~~~~~~~~~l~~  346 (361)
                      +++++.++.....     .+    .+.++++++++++|+++.
T Consensus       283 k~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~  324 (363)
T 4dvj_A          283 KAVSIHHELMFTRPMFGTPDMSEQGRLLNDVSRLVDEGRLRT  324 (363)
T ss_dssp             TTCEEEECCTTHHHHHTCTTTHHHHHHHHHHHHHHHHTSSCC
T ss_pred             ccceEEEEEeeccccccCcchhhHHHHHHHHHHHHHCCCeec
Confidence            8999998765432     11    245789999999999864

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=5e-46  Score=351.45  Aligned_cols=281  Identities=19%  Similarity=0.152  Sum_probs=240.2

Q ss_pred             cceeEEEeecCC-----CCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCC
Q 018072            9 LTCKAAVAWEAG-----KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGV   83 (361)
Q Consensus         9 ~~m~a~~~~~~~-----~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v   83 (361)
                      ++|||+++.++|     +.++++++|.|+|+++||||||.++|||++|++++.|.  ...+|.++|||++|+|+++|+++
T Consensus         1 m~MkA~~~~~~G~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~--~~~~p~i~G~e~~G~V~~vG~~v   78 (346)
T 3fbg_A            1 MSLKAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMD--VSKAPRVLGFDAIGVVESVGNEV   78 (346)
T ss_dssp             -CEEEEEBSSCCCGGGCCCCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHTTSC--CSSSCBCCCCCEEEEEEEECTTC
T ss_pred             CCcEEEEEEeccccCCCceeEeccccCCCCCCCEEEEEEEEEEcCHHHHHHHhCC--CCCCCcCcCCccEEEEEEeCCCC
Confidence            359999999876     23999999999999999999999999999999998875  45789999999999999999999


Q ss_pred             CCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEE
Q 018072           84 SDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAK  163 (361)
Q Consensus        84 ~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~  163 (361)
                      ++|++||+|+....                                              ....|+|+||+++|++.+++
T Consensus        79 ~~~~~GdrV~~~~~----------------------------------------------~~~~G~~aey~~v~~~~~~~  112 (346)
T 3fbg_A           79 TMFNQGDIVYYSGS----------------------------------------------PDQNGSNAEYQLINERLVAK  112 (346)
T ss_dssp             CSCCTTCEEEECCC----------------------------------------------TTSCCSSBSEEEEEGGGEEE
T ss_pred             CcCCCCCEEEEcCC----------------------------------------------CCCCcceeEEEEEChHHeEE
Confidence            99999999985421                                              01125899999999999999


Q ss_pred             CCCCCChhhhhccccchhhhhhhhhhhcCCC------CCCEEEEEc-CCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 018072          164 INPLAPLDKVCILSCGVSTGLGATLNVAKPE------RGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA  236 (361)
Q Consensus       164 iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~------~g~~VlI~G-~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~  236 (361)
                      +|+++++++||++++++.|||+++.+.++++      +|++|||+| +|++|++++|+|+..|+ +|+++++++++++++
T Consensus       113 iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~  191 (346)
T 3fbg_A          113 APKNISAEQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWT  191 (346)
T ss_dssp             CCSSSCHHHHTTSHHHHHHHHHHHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCSHHHHHHH
T ss_pred             CCCCCCHHHhhhcchhHHHHHHHHHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHH
Confidence            9999999999999999999999988889998      999999995 59999999999999999 999999999999999


Q ss_pred             HHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cc
Q 018072          237 KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NE  315 (361)
Q Consensus       237 ~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~  315 (361)
                      +++|+++++++.+ +  +.+.++++.++++|++||++|++..+..++++|+++ |+++.+|...  ..++  ...++ ++
T Consensus       192 ~~lGa~~vi~~~~-~--~~~~~~~~~~~g~Dvv~d~~g~~~~~~~~~~~l~~~-G~iv~~~~~~--~~~~--~~~~~~~~  263 (346)
T 3fbg_A          192 KKMGADIVLNHKE-S--LLNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPR-GHIATIVAFE--NDQD--LNALKPKS  263 (346)
T ss_dssp             HHHTCSEEECTTS-C--HHHHHHHHTCCCEEEEEESSCHHHHHHHHHHHEEEE-EEEEESSCCS--SCBC--GGGGTTTT
T ss_pred             HhcCCcEEEECCc-c--HHHHHHHhCCCCccEEEECCCchHHHHHHHHHhccC-CEEEEECCCC--CCCc--cccccccc
Confidence            9999999998864 3  778888874449999999999977889999999998 9999987533  2333  33344 89


Q ss_pred             cEEEEeeecCCCc---------CCcHHHHHHHHHcCCccc
Q 018072          316 RTLKGTFFGNYKP---------RTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       316 ~~l~g~~~~~~~~---------~~~~~~~~~~~~~~~l~~  346 (361)
                      +++.+++......         .+.++++++++++|+++.
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~  303 (346)
T 3fbg_A          264 LSFSHEFMFARPLNQTDDMIKHHEYLEDITNKVEQNIYQP  303 (346)
T ss_dssp             CEEEECCTTHHHHTTCTTTHHHHHHHHHHHHHHHTTSSCC
T ss_pred             eEEEEEEEecccccchhhHHHHHHHHHHHHHHHHCCCEEC
Confidence            9999876543210         245788999999999864

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.1e-45  Score=349.54  Aligned_cols=284  Identities=24%  Similarity=0.339  Sum_probs=238.2

Q ss_pred             ccccccceeEEEeecCCCC--eEE-EEeecCCCCCCeEEEEEeEEecCccchhccccCCC-CCCCCcccccceeEEEEEe
Q 018072            4 TAGLILTCKAAVAWEAGKP--LII-QDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ-TPLFPRIFGHEAAGVVESV   79 (361)
Q Consensus         4 ~~~~~~~m~a~~~~~~~~~--~~~-~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~   79 (361)
                      |.+.|.+|||+++.+++.+  +++ +++|.|+|+++||+|||.++|||++|++++.|.++ ...+|.++|||++|+|+++
T Consensus        23 m~~~~~~Mka~~~~~~g~~~~l~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~v  102 (351)
T 1yb5_A           23 MATGQKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAV  102 (351)
T ss_dssp             -----CEEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEE
T ss_pred             hccCcceEEEEEEccCCCcceeEEeeecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcCCceeEEEEEEE
Confidence            4445778999999987754  888 89999999999999999999999999999888654 2457999999999999999


Q ss_pred             CCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEecc
Q 018072           80 GEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG  159 (361)
Q Consensus        80 G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~  159 (361)
                      |+++++|++||||+..+.                              .                  .|+|+||+++|++
T Consensus       103 G~~v~~~~vGdrV~~~~~------------------------------~------------------~G~~aey~~v~~~  134 (351)
T 1yb5_A          103 GDNASAFKKGDRVFTSST------------------------------I------------------SGGYAEYALAADH  134 (351)
T ss_dssp             CTTCTTCCTTCEEEESCC------------------------------S------------------SCSSBSEEEEEGG
T ss_pred             CCCCCCCCCCCEEEEeCC------------------------------C------------------CCcceeEEEECHH
Confidence            999999999999985421                              0                  1489999999999


Q ss_pred             ceEECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH
Q 018072          160 CVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK  238 (361)
Q Consensus       160 ~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~  238 (361)
                      .++++|+++++++||++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++++.+++
T Consensus       135 ~~~~~P~~l~~~~aA~l~~~~~ta~~al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~  213 (351)
T 1yb5_A          135 TVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQ  213 (351)
T ss_dssp             GEEECCTTSCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH
T ss_pred             HeEECCCCCCHHHHHhhhhHHHHHHHHHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHH
Confidence            999999999999999999999999999877899999999999998 9999999999999999 89999999999999999


Q ss_pred             cCCCEEEcCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh-cccc
Q 018072          239 FGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNER  316 (361)
Q Consensus       239 ~G~~~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~  316 (361)
                      +|++.++++.+.+  +.+.+.+.+++ ++|++||++|+ ..+..++++++++ |+++.+|... .  ..++...+ .+++
T Consensus       214 ~ga~~~~d~~~~~--~~~~~~~~~~~~~~D~vi~~~G~-~~~~~~~~~l~~~-G~iv~~g~~~-~--~~~~~~~~~~~~~  286 (351)
T 1yb5_A          214 NGAHEVFNHREVN--YIDKIKKYVGEKGIDIIIEMLAN-VNLSKDLSLLSHG-GRVIVVGSRG-T--IEINPRDTMAKES  286 (351)
T ss_dssp             TTCSEEEETTSTT--HHHHHHHHHCTTCEEEEEESCHH-HHHHHHHHHEEEE-EEEEECCCCS-C--EEECTHHHHTTTC
T ss_pred             cCCCEEEeCCCch--HHHHHHHHcCCCCcEEEEECCCh-HHHHHHHHhccCC-CEEEEEecCC-C--CccCHHHHHhCCc
Confidence            9999999887655  77788887776 89999999998 5788999999997 9999999643 3  33333333 4999


Q ss_pred             EEEEeeecCCCcCCcHH----HHHHHHHcCCc
Q 018072          317 TLKGTFFGNYKPRTDLP----SVVDMYMNKVI  344 (361)
Q Consensus       317 ~l~g~~~~~~~~~~~~~----~~~~~~~~~~l  344 (361)
                      ++.|+..... .+++++    .+.++++++++
T Consensus       287 ~i~g~~~~~~-~~~~~~~~~~~l~~~~~~g~l  317 (351)
T 1yb5_A          287 SIIGVTLFSS-TKEEFQQYAAALQAGMEIGWL  317 (351)
T ss_dssp             EEEECCGGGC-CHHHHHHHHHHHHHHHHHTCC
T ss_pred             EEEEEEeecC-CHHHHHHHHHHHHHHHHCCCc
Confidence            9999865432 123454    44556777766

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=2e-46  Score=354.67  Aligned_cols=281  Identities=23%  Similarity=0.317  Sum_probs=231.8

Q ss_pred             cceeEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCCC
Q 018072            9 LTCKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSD   85 (361)
Q Consensus         9 ~~m~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~~   85 (361)
                      ++|||+++.+++++  +++++.|.|+|+++||||||.++|||++|++++.|.++. ..+|.++|||++|+|+++|+++++
T Consensus         2 m~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~~   81 (349)
T 4a27_A            2 MEMRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKG   81 (349)
T ss_dssp             CCEEEEEECSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECTTCCS
T ss_pred             ceeEEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCcCCCCCCCccccceeEEEEEEeCCCCCC
Confidence            57999999999854  999999999999999999999999999999999987643 568999999999999999999999


Q ss_pred             CCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECC
Q 018072           86 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN  165 (361)
Q Consensus        86 ~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP  165 (361)
                      |++||+|+..+.                                                 .|+|+||+++|.+.++++|
T Consensus        82 ~~~GdrV~~~~~-------------------------------------------------~G~~aey~~v~~~~~~~iP  112 (349)
T 4a27_A           82 YEIGDRVMAFVN-------------------------------------------------YNAWAEVVCTPVEFVYKIP  112 (349)
T ss_dssp             CCTTCEEEEECS-------------------------------------------------SCCSBSEEEEEGGGEEECC
T ss_pred             CCCCCEEEEecC-------------------------------------------------CCcceEEEEecHHHeEECC
Confidence            999999985421                                                 2489999999999999999


Q ss_pred             CCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEE
Q 018072          166 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF  244 (361)
Q Consensus       166 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~v  244 (361)
                      +++++++||++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|..+|++++ ++++++.++ +|++++
T Consensus       113 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-~ga~~~  190 (349)
T 4a27_A          113 DDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-DSVTHL  190 (349)
T ss_dssp             TTSCHHHHHTSHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-GGSSEE
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-cCCcEE
Confidence            999999999999999999999888899999999999998 99999999999999755899887 667888888 999999


Q ss_pred             EcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCc---------------eeecCh
Q 018072          245 VNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA---------------VFMTKP  309 (361)
Q Consensus       245 v~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~---------------~~~~~~  309 (361)
                      ++ .+.+  +.+.+++++++++|+|||++|++ .+..++++++++ |+++++|......               ...+++
T Consensus       191 ~~-~~~~--~~~~~~~~~~~g~Dvv~d~~g~~-~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (349)
T 4a27_A          191 FD-RNAD--YVQEVKRISAEGVDIVLDCLCGD-NTGKGLSLLKPL-GTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNP  265 (349)
T ss_dssp             EE-TTSC--HHHHHHHHCTTCEEEEEEECC--------CTTEEEE-EEEEEEC-------------------------CH
T ss_pred             Ec-CCcc--HHHHHHHhcCCCceEEEECCCch-hHHHHHHHhhcC-CEEEEECCCcccccccccccccccccccccccCH
Confidence            98 5444  88888888877999999999984 558999999998 9999999753211               012333


Q ss_pred             hhhc-cccEEEEeeecCCC--------cCCcHHHHHHHHHcCCcc
Q 018072          310 INVL-NERTLKGTFFGNYK--------PRTDLPSVVDMYMNKVIR  345 (361)
Q Consensus       310 ~~~~-~~~~l~g~~~~~~~--------~~~~~~~~~~~~~~~~l~  345 (361)
                      ..++ +++++.|+..+.+.        .+++++++++++++|+++
T Consensus       266 ~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~  310 (349)
T 4a27_A          266 IKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYNQKKIK  310 (349)
T ss_dssp             HHHHHHTCEEEEECHHHHHHTSCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             HHHhhcCceEEEEeehheeccccchHHHHHHHHHHHHHHHCCCcc
Confidence            4344 89999998764321        146789999999999884

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=1.8e-46  Score=356.97  Aligned_cols=288  Identities=19%  Similarity=0.218  Sum_probs=239.8

Q ss_pred             ccceeEEEeecCCCC---eEEEEeecCCCC--CCeEEEEEeEEecCccchhccccCCCC-CCCC---------cccccce
Q 018072            8 ILTCKAAVAWEAGKP---LIIQDVEVAPPQ--AMEVRIKIKYTSLCRTDLYFWESKGQT-PLFP---------RIFGHEA   72 (361)
Q Consensus         8 ~~~m~a~~~~~~~~~---~~~~~~~~p~~~--~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p---------~~~G~e~   72 (361)
                      |++|||+++.+++++   ++++++|.|+|.  ++||||||.++|||++|++++.|.++. ..+|         .++|||+
T Consensus         1 ~~~mka~~~~~~g~~~~~l~~~~~~~P~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~~~~~~~p~~i~G~E~   80 (364)
T 1gu7_A            1 MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEG   80 (364)
T ss_dssp             CEEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCC
T ss_pred             CceEEEEEeccCCCchheeEEeeccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCCCCCCccccccCcccccCcee
Confidence            467999999999875   899999999887  999999999999999999999886543 3456         8999999


Q ss_pred             eEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCccccee
Q 018072           73 AGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSE  152 (361)
Q Consensus        73 ~G~V~~~G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae  152 (361)
                      +|+|+++|+++++|++||+|++.+.                                                ..|+|+|
T Consensus        81 ~G~V~~vG~~v~~~~vGdrV~~~~~------------------------------------------------~~G~~ae  112 (364)
T 1gu7_A           81 LFEVIKVGSNVSSLEAGDWVIPSHV------------------------------------------------NFGTWRT  112 (364)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEESSS------------------------------------------------CCCCSBS
T ss_pred             EEEEEEeCCCCCcCCCCCEEEecCC------------------------------------------------CCCcchh
Confidence            9999999999999999999985421                                                1248999


Q ss_pred             eEEEeccceEECCC-----------CCChhhhhccccchhhhhhhhhhhcCCCCC-CEEEEEcC-CHHHHHHHHHHHHcC
Q 018072          153 YTVVHSGCVAKINP-----------LAPLDKVCILSCGVSTGLGATLNVAKPERG-SSVAVFGL-GAVGLAAAEGARIAG  219 (361)
Q Consensus       153 ~v~v~~~~~~~iP~-----------~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g-~~VlI~G~-g~vG~~a~~~a~~~g  219 (361)
                      |+++|++.++++|+           ++++++||++++++.|||+++.+.+++++| ++|||+|+ |++|++++|+|+.+|
T Consensus       113 y~~v~~~~~~~~P~~~~~~~~~~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~G  192 (364)
T 1gu7_A          113 HALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLN  192 (364)
T ss_dssp             EEEEEGGGEEEECCHHHHHHTTCSCCCCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHT
T ss_pred             eEecCHHHeEEcCCccccccccccCCCCHHHHhhccccHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCC
Confidence            99999999999999           899999999999999999998777799999 99999998 999999999999999


Q ss_pred             CCeEEEEcCChhh----HHHHHHcCCCEEEcCCCC-CccHHHHHHHHc--CC-CccEEEEccCChHHHHHHHHHhcCCCc
Q 018072          220 ASRIIGVDRSSKR----FEEAKKFGVTDFVNTSEH-DRPIQEVIAEMT--NG-GVDRSVECTGNIDNMISAFECVHDGWG  291 (361)
Q Consensus       220 ~~~Vi~~~~~~~~----~~~~~~~G~~~vv~~~~~-~~~~~~~i~~~~--~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G  291 (361)
                      + +|+++.++.++    +++++++|+++++++.+. +.++.+.+++++  ++ ++|+|||++|++... .++++++++ |
T Consensus       193 a-~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~~g~Dvvid~~G~~~~~-~~~~~l~~~-G  269 (364)
T 1gu7_A          193 F-NSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSST-GIARKLNNN-G  269 (364)
T ss_dssp             C-EEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHHHH-HHHHTSCTT-C
T ss_pred             C-EEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhhccCCCceEEEECCCchhHH-HHHHHhccC-C
Confidence            9 78777665544    677889999999987641 123777888877  44 899999999986555 889999998 9


Q ss_pred             EEEEEcCCCCCceeecChhhhc-cccEEEEeeecCCCc------CCcHHHHHHHHHcCCcccC
Q 018072          292 VAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKP------RTDLPSVVDMYMNKVIRFS  347 (361)
Q Consensus       292 ~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~~~~~------~~~~~~~~~~~~~~~l~~~  347 (361)
                      +++.+|.... ....++...++ +++++.|++.+.+..      .++++++++++++|++++.
T Consensus       270 ~~v~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~  331 (364)
T 1gu7_A          270 LMLTYGGMSF-QPVTIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDA  331 (364)
T ss_dssp             EEEECCCCSS-CCEEECHHHHHHSCCEEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred             EEEEecCCCC-CCcccCHHHHhhcCcEEEEEchhHhcccCHHHHHHHHHHHHHHHHcCCcccc
Confidence            9999997652 23344444444 999999987654211      2568899999999999764

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=100.00  E-value=1.9e-47  Score=361.68  Aligned_cols=290  Identities=14%  Similarity=0.183  Sum_probs=237.8

Q ss_pred             CCCccccccceeEEEee--cC---CCCeEEEEe---------ecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCC
Q 018072            1 MSSTAGLILTCKAAVAW--EA---GKPLIIQDV---------EVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFP   65 (361)
Q Consensus         1 m~~~~~~~~~m~a~~~~--~~---~~~~~~~~~---------~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p   65 (361)
                      ||+| ++|.+|||+++.  +.   .+.++++++         |.|+|+++||||||+++|||++|++++.|.++. .++|
T Consensus         2 Ms~m-~~p~~mka~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p   80 (349)
T 3pi7_A            2 MSPM-TIPSEMKALLLVGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPRVKG   80 (349)
T ss_dssp             ---C-CCCSEEEEEEECSCBSCSSCCCSCCCCSTTTEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSSCBCTT
T ss_pred             CCCC-CCchhheEEEEEccccCCCcccceEEEeecccccccCCCCCCCCCeEEEEEEEecCCHHHHHHhcccCCCCCCCC
Confidence            7765 478999999999  22   223777888         999999999999999999999999999986643 4689


Q ss_pred             cccccceeEEEEEeCCCC-CCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccc
Q 018072           66 RIFGHEAAGVVESVGEGV-SDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHF  144 (361)
Q Consensus        66 ~~~G~e~~G~V~~~G~~v-~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~  144 (361)
                      .++|||++|+|+++|++| ++|++||+|++..                           |                   .
T Consensus        81 ~v~G~E~~G~V~~vG~~v~~~~~vGdrV~~~~---------------------------g-------------------~  114 (349)
T 3pi7_A           81 RPAGFEGVGTIVAGGDEPYAKSLVGKRVAFAT---------------------------G-------------------L  114 (349)
T ss_dssp             SBCCSEEEEEEEEECSSHHHHHHTTCEEEEEC---------------------------T-------------------T
T ss_pred             CCccceEEEEEEEECCCccCCCCCCCEEEEec---------------------------c-------------------C
Confidence            999999999999999999 9999999998652                           1                   1


Q ss_pred             cCcccceeeEEEeccceEECCCCCChhhhhccccchhhhhhhhhhhcCCCCC-CEEEEEcC-CHHHHHHHHHHHHcCCCe
Q 018072          145 LGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERG-SSVAVFGL-GAVGLAAAEGARIAGASR  222 (361)
Q Consensus       145 ~~~G~~ae~v~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g-~~VlI~G~-g~vG~~a~~~a~~~g~~~  222 (361)
                      ...|+|+||+++|++.++++|+++++++||++++...|||++ .+.++ ++| ++|||+|+ |++|++++|+|+..|+ +
T Consensus       115 ~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~-~~~~~-~~g~~~vli~gg~g~vG~~a~qla~~~Ga-~  191 (349)
T 3pi7_A          115 SNWGSWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIAM-FDIVK-QEGEKAFVMTAGASQLCKLIIGLAKEEGF-R  191 (349)
T ss_dssp             SSCCSSBSEEEEEGGGEEECCTTCCC--GGGSSHHHHHHHHH-HHHHH-HHCCSEEEESSTTSHHHHHHHHHHHHHTC-E
T ss_pred             CCCccceeeEeechHHeEECCCCCCHHHHhhccccHHHHHHH-HHHHh-hCCCCEEEEeCCCcHHHHHHHHHHHHCCC-E
Confidence            113589999999999999999999999999999999999965 56666 777 68888854 9999999999999999 9


Q ss_pred             EEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCC
Q 018072          223 IIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK  301 (361)
Q Consensus       223 Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~  301 (361)
                      |++++++++|+++++++|+++++++.+.+  +.+.+++++++ ++|++||++|+ ..+..++++++++ |+++.+|....
T Consensus       192 Vi~~~~~~~~~~~~~~~Ga~~~~~~~~~~--~~~~v~~~~~~~g~D~vid~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~  267 (349)
T 3pi7_A          192 PIVTVRRDEQIALLKDIGAAHVLNEKAPD--FEATLREVMKAEQPRIFLDAVTG-PLASAIFNAMPKR-ARWIIYGRLDP  267 (349)
T ss_dssp             EEEEESCGGGHHHHHHHTCSEEEETTSTT--HHHHHHHHHHHHCCCEEEESSCH-HHHHHHHHHSCTT-CEEEECCCSCC
T ss_pred             EEEEeCCHHHHHHHHHcCCCEEEECCcHH--HHHHHHHHhcCCCCcEEEECCCC-hhHHHHHhhhcCC-CEEEEEeccCC
Confidence            99999999999999999999999987765  88899988876 99999999998 4568999999998 99999997553


Q ss_pred             CceeecCh-hh-hccccEEEEeeecCCC------cCCcHHHHHHHHHcCCcc
Q 018072          302 DAVFMTKP-IN-VLNERTLKGTFFGNYK------PRTDLPSVVDMYMNKVIR  345 (361)
Q Consensus       302 ~~~~~~~~-~~-~~~~~~l~g~~~~~~~------~~~~~~~~~~~~~~~~l~  345 (361)
                      . ...++. .. +.+++++.|++.+.+.      ..++++++++++++|+++
T Consensus       268 ~-~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~  318 (349)
T 3pi7_A          268 D-ATVIREPGQLIFQHKHIEGFWLSEWMRQFKERRGPAILEAQKRFSDGRWS  318 (349)
T ss_dssp             S-CCCCSCTHHHHHSCCEEEECCHHHHHHHTHHHHHHHHHHC-CTTTTSSCC
T ss_pred             C-CCCCCchhhhhccccEEEEEEehhhhhhCcHHHHHHHHHHHHHHHcCCcc
Confidence            2 233333 33 3499999998866532      135677888888888884

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=9.5e-46  Score=350.60  Aligned_cols=284  Identities=22%  Similarity=0.302  Sum_probs=237.9

Q ss_pred             ccccccceeEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeC
Q 018072            4 TAGLILTCKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVG   80 (361)
Q Consensus         4 ~~~~~~~m~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G   80 (361)
                      ...+|.+|||+++.+++.+  ++++++|.|+|+++||||||.++|||++|++++.|.++. ..+|.++|||++|+|+++|
T Consensus        16 ~~~~~~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~E~~G~V~~vG   95 (354)
T 2j8z_A           16 ENLYFQSMLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVAELG   95 (354)
T ss_dssp             -----CEEEEEEESSCSSGGGEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCCTTSCSSSCSEEEEEEEEEC
T ss_pred             cccchhheeEEEEccCCCccceEEeecCCCCCCCCeEEEEEEEeecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEEC
Confidence            3457889999999998864  899999999999999999999999999999999886653 3478999999999999999


Q ss_pred             CCC-CCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEecc
Q 018072           81 EGV-SDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG  159 (361)
Q Consensus        81 ~~v-~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~  159 (361)
                      ++| ++|++||+|+...                               .                  .|+|+||+++|++
T Consensus        96 ~~v~~~~~vGdrV~~~~-------------------------------~------------------~G~~aey~~v~~~  126 (354)
T 2j8z_A           96 PGCQGHWKIGDTAMALL-------------------------------P------------------GGGQAQYVTVPEG  126 (354)
T ss_dssp             SCC--CCCTTCEEEEEC-------------------------------S------------------SCCSBSEEEEEGG
T ss_pred             CCcCCCCCCCCEEEEec-------------------------------C------------------CCcceeEEEeCHH
Confidence            999 9999999998431                               1                  1489999999999


Q ss_pred             ceEECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH
Q 018072          160 CVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK  238 (361)
Q Consensus       160 ~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~  238 (361)
                      .++++|+++++++||++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++++.+++
T Consensus       127 ~~~~iP~~ls~~~aa~l~~~~~tA~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~  205 (354)
T 2j8z_A          127 LLMPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAEK  205 (354)
T ss_dssp             GEEECCTTCCHHHHTTSHHHHHHHHHHHTTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH
T ss_pred             HcEECCCCCCHHHHHhccchHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH
Confidence            999999999999999999999999999878899999999999986 9999999999999999 89999999999999999


Q ss_pred             cCCCEEEcCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecCh-hhhc-cc
Q 018072          239 FGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVL-NE  315 (361)
Q Consensus       239 ~G~~~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~~-~~  315 (361)
                      +|++.++++.+.+  +.+.+.+.+++ ++|++||++|+ ..+..++++|+++ |+++.+|..... ...++. ..++ ++
T Consensus       206 ~g~~~~~~~~~~~--~~~~~~~~~~~~~~d~vi~~~G~-~~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~~~  280 (354)
T 2j8z_A          206 LGAAAGFNYKKED--FSEATLKFTKGAGVNLILDCIGG-SYWEKNVNCLALD-GRWVLYGLMGGG-DINGPLFSKLLFKR  280 (354)
T ss_dssp             HTCSEEEETTTSC--HHHHHHHHTTTSCEEEEEESSCG-GGHHHHHHHEEEE-EEEEECCCTTCS-CCCSCHHHHHHHTT
T ss_pred             cCCcEEEecCChH--HHHHHHHHhcCCCceEEEECCCc-hHHHHHHHhccCC-CEEEEEeccCCC-ccCCChhHHHHhCC
Confidence            9999999887655  77888888776 89999999998 4888999999997 999999976532 233444 3334 99


Q ss_pred             cEEEEeeecCCCcC------Cc-HHHHHHHHHcC
Q 018072          316 RTLKGTFFGNYKPR------TD-LPSVVDMYMNK  342 (361)
Q Consensus       316 ~~l~g~~~~~~~~~------~~-~~~~~~~~~~~  342 (361)
                      +++.|++.+.....      .+ ++++++++++|
T Consensus       281 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g  314 (354)
T 2j8z_A          281 GSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTE  314 (354)
T ss_dssp             CEEEECCSTTCCHHHHHHHHHHHHHHTGGGGTC-
T ss_pred             CEEEEEEcccccccccHHHHHHHHHHHHHHHHcC
Confidence            99999876543210      01 23577788888

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=6.2e-46  Score=347.34  Aligned_cols=278  Identities=21%  Similarity=0.247  Sum_probs=232.2

Q ss_pred             ccceeEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCC-----CCCCCCcccccceeEEEEEeC
Q 018072            8 ILTCKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG-----QTPLFPRIFGHEAAGVVESVG   80 (361)
Q Consensus         8 ~~~m~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~-----~~~~~p~~~G~e~~G~V~~~G   80 (361)
                      |++|||+++.+++++  +++++.|.|+|+++||||||.++|||++|++++.|..     ....+|.++|||++|+|+++|
T Consensus         4 m~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~vG   83 (321)
T 3tqh_A            4 MKEMKAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIELG   83 (321)
T ss_dssp             -CEEEEEEESSSCSGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCEEEEEEEEEC
T ss_pred             cccceEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEEcCHHHHHHhcCCccccccccCCCCCcccceeEEEEEEeC
Confidence            568999999998876  9999999999999999999999999999999988732     235679999999999999999


Q ss_pred             CCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccc
Q 018072           81 EGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGC  160 (361)
Q Consensus        81 ~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~  160 (361)
                      +++++|++||||+..+..+                                             ...|+|+||+++|++.
T Consensus        84 ~~v~~~~~GdrV~~~~~~~---------------------------------------------~~~G~~aey~~v~~~~  118 (321)
T 3tqh_A           84 SDVNNVNIGDKVMGIAGFP---------------------------------------------DHPCCYAEYVCASPDT  118 (321)
T ss_dssp             TTCCSCCTTCEEEEECSTT---------------------------------------------TCCCCSBSEEEECGGG
T ss_pred             CCCCCCCCCCEEEEccCCC---------------------------------------------CCCCcceEEEEecHHH
Confidence            9999999999998654211                                             0124899999999999


Q ss_pred             eEECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEc-CCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc
Q 018072          161 VAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF  239 (361)
Q Consensus       161 ~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G-~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~  239 (361)
                      ++++|+++++++||++++++.|||+++ +.+++++|++|||+| +|++|++++|+|+.+|+ +|+++. +++++++++++
T Consensus       119 ~~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga-~vi~~~-~~~~~~~~~~l  195 (321)
T 3tqh_A          119 IIQKLEKLSFLQAASLPTAGLTALQAL-NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTA-SKRNHAFLKAL  195 (321)
T ss_dssp             EEECCTTSCHHHHHHSHHHHHHHHHHH-HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEE-CHHHHHHHHHH
T ss_pred             hccCCCCCCHHHHhhhhhHHHHHHHHH-HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEe-ccchHHHHHHc
Confidence            999999999999999999999999997 889999999999997 59999999999999999 899886 56679999999


Q ss_pred             CCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEE
Q 018072          240 GVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLK  319 (361)
Q Consensus       240 G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~  319 (361)
                      |+++++++.+.+. +.+.+     .++|+|||++|++. ...++++++++ |+++.+|.......  + .....+++++.
T Consensus       196 Ga~~~i~~~~~~~-~~~~~-----~g~D~v~d~~g~~~-~~~~~~~l~~~-G~iv~~g~~~~~~~--~-~~~~~~~~~~~  264 (321)
T 3tqh_A          196 GAEQCINYHEEDF-LLAIS-----TPVDAVIDLVGGDV-GIQSIDCLKET-GCIVSVPTITAGRV--I-EVAKQKHRRAF  264 (321)
T ss_dssp             TCSEEEETTTSCH-HHHCC-----SCEEEEEESSCHHH-HHHHGGGEEEE-EEEEECCSTTHHHH--H-HHHHHTTCEEE
T ss_pred             CCCEEEeCCCcch-hhhhc-----cCCCEEEECCCcHH-HHHHHHhccCC-CEEEEeCCCCchhh--h-hhhhhcceEEE
Confidence            9999999877541 22221     47999999999954 49999999998 99999986542211  1 12234889998


Q ss_pred             EeeecCCCcCCcHHHHHHHHHcCCccc
Q 018072          320 GTFFGNYKPRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       320 g~~~~~~~~~~~~~~~~~~~~~~~l~~  346 (361)
                      +++..  ...++++++++++++|+++.
T Consensus       265 ~~~~~--~~~~~~~~~~~l~~~g~l~~  289 (321)
T 3tqh_A          265 GLLKQ--FNIEELHYLGKLVSEDKLRI  289 (321)
T ss_dssp             CCCCC--CCHHHHHHHHHHHHTTSSCC
T ss_pred             EEecC--CCHHHHHHHHHHHHCCCccc
Confidence            75432  23578999999999999854

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=8.5e-47  Score=352.27  Aligned_cols=276  Identities=15%  Similarity=0.135  Sum_probs=217.8

Q ss_pred             ccceeEEEeec-CCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCC
Q 018072            8 ILTCKAAVAWE-AGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDL   86 (361)
Q Consensus         8 ~~~m~a~~~~~-~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~   86 (361)
                      |.||||+++.+ ++. ++++++|.|+|+++||||||.++|||++|++++.|..+..++|.++|||++|+|+++|+++++|
T Consensus         2 M~tMka~~~~~~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~   80 (315)
T 3goh_A            2 MEQHQVWAYQTKTHS-VTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPINWSNGHVPGVDGAGVIVKVGAKVDSK   80 (315)
T ss_dssp             CCEEEEEEEETTTTE-EEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHHCTTCCCTTCCCCSEEEEEEEEECTTSCGG
T ss_pred             CcceEEEEEeCCCCe-eEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHcCCCCcCCCCCEeeeeeEEEEEEeCCCCCCC
Confidence            45799999995 544 9999999999999999999999999999999999987767889999999999999999999999


Q ss_pred             CCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCC
Q 018072           87 EVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP  166 (361)
Q Consensus        87 ~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~  166 (361)
                      ++||||+..+..                                              ...|+|+||+++|++.++++|+
T Consensus        81 ~vGdrV~~~~~~----------------------------------------------~~~G~~aey~~v~~~~~~~iP~  114 (315)
T 3goh_A           81 MLGRRVAYHTSL----------------------------------------------KRHGSFAEFTVLNTDRVMTLPD  114 (315)
T ss_dssp             GTTCEEEEECCT----------------------------------------------TSCCSSBSEEEEETTSEEECCT
T ss_pred             CCCCEEEEeCCC----------------------------------------------CCCcccccEEEEcHHHhccCcC
Confidence            999999865311                                              1124899999999999999999


Q ss_pred             CCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEc
Q 018072          167 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  246 (361)
Q Consensus       167 ~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~  246 (361)
                      ++++++||++++++.|||+++ +.+++++|++|||+|+|++|++++|+|+.+|+ +|++++ +++|+++++++|++++++
T Consensus       115 ~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~lGa~~v~~  191 (315)
T 3goh_A          115 NLSFERAAALPCPLLTAWQAF-EKIPLTKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKRGVRHLYR  191 (315)
T ss_dssp             TSCHHHHHTSHHHHHHHHHHH-TTSCCCSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHHTEEEEES
T ss_pred             CCCHHHHhhCccHHHHHHHHH-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHcCCCEEEc
Confidence            999999999999999999998 88999999999999999999999999999999 999999 999999999999999884


Q ss_pred             CCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhh-hccccEEEEeee-c
Q 018072          247 TSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFF-G  324 (361)
Q Consensus       247 ~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~l~g~~~-~  324 (361)
                        + .    +.+    ++++|+|||++|++ ....++++++++ |+++.+|.............. .++++++.+++. +
T Consensus       192 --d-~----~~v----~~g~Dvv~d~~g~~-~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (315)
T 3goh_A          192 --E-P----SQV----TQKYFAIFDAVNSQ-NAAALVPSLKAN-GHIICIQDRIPAPIDPAFTRTISYHEIALGALHDFG  258 (315)
T ss_dssp             --S-G----GGC----CSCEEEEECC--------TTGGGEEEE-EEEEEECCC----------CCSEEEEECGGGHHHHC
T ss_pred             --C-H----HHh----CCCccEEEECCCch-hHHHHHHHhcCC-CEEEEEeCCCCccccchhhhcceeeEEEeecccccC
Confidence              1 1    122    44999999999994 558899999998 999999864422222211111 113333333322 1


Q ss_pred             CCC----cCCcHHHHHHHHHcCCccc
Q 018072          325 NYK----PRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       325 ~~~----~~~~~~~~~~~~~~~~l~~  346 (361)
                      ...    ..+.++++++++++|+++.
T Consensus       259 ~~~~~~~~~~~~~~~~~l~~~g~l~~  284 (315)
T 3goh_A          259 DRQDWQILMQQGEALLTLIAQGKMEI  284 (315)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTTSSCC
T ss_pred             ChhHHHHHHHHHHHHHHHHHCCCccc
Confidence            110    1234688999999999853

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=5.7e-46  Score=352.54  Aligned_cols=287  Identities=20%  Similarity=0.296  Sum_probs=234.0

Q ss_pred             ccccceeEEEeecCCCC---eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCC
Q 018072            6 GLILTCKAAVAWEAGKP---LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGE   81 (361)
Q Consensus         6 ~~~~~m~a~~~~~~~~~---~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~   81 (361)
                      ++|.+|||+++.+++.+   +++++.|.|+|+++||||||.++|||++|++++.|.++. ..+|.++|||++|+|+++|+
T Consensus        22 ~m~~~mka~~~~~~g~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~vG~  101 (357)
T 1zsy_A           22 SMPARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVVAVGS  101 (357)
T ss_dssp             CCCCCEEEEEESSSSCHHHHEEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSEECCSCCEEEEEEECT
T ss_pred             hCchhhEEEEEecCCCccceEEEeeccCCCCCCCEEEEEEEECCCCHHHhhHhcCCCCCCCCCCccccceEEEEEEEeCC
Confidence            35778999999999875   889999999999999999999999999999999886554 35799999999999999999


Q ss_pred             CCCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccce
Q 018072           82 GVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCV  161 (361)
Q Consensus        82 ~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~  161 (361)
                      ++++|++||||++.+.                                                +.|+|+||+++|++.+
T Consensus       102 ~v~~~~vGdrV~~~~~------------------------------------------------~~G~~aey~~v~~~~~  133 (357)
T 1zsy_A          102 NVTGLKPGDWVIPANA------------------------------------------------GLGTWRTEAVFSEEAL  133 (357)
T ss_dssp             TCCSCCTTCEEEESSS------------------------------------------------CSCCSBSEEEEEGGGE
T ss_pred             CCCCCCCCCEEEEcCC------------------------------------------------CCccceeEEecCHHHc
Confidence            9999999999985421                                                1248999999999999


Q ss_pred             EECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEc-CCh---hhHHHH
Q 018072          162 AKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD-RSS---KRFEEA  236 (361)
Q Consensus       162 ~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~-~~~---~~~~~~  236 (361)
                      +++|+++++++||++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +++++. +++   ++++++
T Consensus       134 ~~iP~~l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~~  212 (357)
T 1zsy_A          134 IQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGL-RTINVVRDRPDIQKLSDRL  212 (357)
T ss_dssp             EEECSSSCHHHHHHTTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEECCCSCHHHHHHHH
T ss_pred             EECCCCCCHHHHhhhcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCC-EEEEEecCccchHHHHHHH
Confidence            9999999999999999889999999878889999999999998 9999999999999999 555554 433   367889


Q ss_pred             HHcCCCEEEcCCCCCccHHHHHHHHcCC--CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-
Q 018072          237 KKFGVTDFVNTSEHDRPIQEVIAEMTNG--GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-  313 (361)
Q Consensus       237 ~~~G~~~vv~~~~~~~~~~~~i~~~~~~--g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-  313 (361)
                      +++|+++++++.+.   ..+.+.+++.+  ++|+|||++|++. ...++++++++ |+++.+|.... ....++...++ 
T Consensus       213 ~~lGa~~vi~~~~~---~~~~~~~~~~~~~~~Dvvid~~g~~~-~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~  286 (357)
T 1zsy_A          213 KSLGAEHVITEEEL---RRPEMKNFFKDMPQPRLALNCVGGKS-STELLRQLARG-GTMVTYGGMAK-QPVVASVSLLIF  286 (357)
T ss_dssp             HHTTCSEEEEHHHH---HSGGGGGTTSSSCCCSEEEESSCHHH-HHHHHTTSCTT-CEEEECCCCTT-CCBCCCHHHHHH
T ss_pred             HhcCCcEEEecCcc---hHHHHHHHHhCCCCceEEEECCCcHH-HHHHHHhhCCC-CEEEEEecCCC-CCCCCCHHHHHh
Confidence            99999999876421   11234444443  5999999999854 46789999997 99999986542 22334443344 


Q ss_pred             cccEEEEeeecCCC-------cCCcHHHHHHHHHcCCcccC
Q 018072          314 NERTLKGTFFGNYK-------PRTDLPSVVDMYMNKVIRFS  347 (361)
Q Consensus       314 ~~~~l~g~~~~~~~-------~~~~~~~~~~~~~~~~l~~~  347 (361)
                      +++++.|++.+.+.       .++.++++++++++|++++.
T Consensus       287 ~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~  327 (357)
T 1zsy_A          287 KDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLTAP  327 (357)
T ss_dssp             SCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCC
T ss_pred             cCceEEEEEcchhcccCCHHHHHHHHHHHHHHHHcCCCcCc
Confidence            99999998765321       12457889999999998653

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=4.3e-45  Score=343.35  Aligned_cols=281  Identities=24%  Similarity=0.333  Sum_probs=237.6

Q ss_pred             eeEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCC--CC-CCCCcccccceeEEEEEeCCCCCC
Q 018072           11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG--QT-PLFPRIFGHEAAGVVESVGEGVSD   85 (361)
Q Consensus        11 m~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~--~~-~~~p~~~G~e~~G~V~~~G~~v~~   85 (361)
                      |||+++.+++.+  +++++.|.|+|+++||||||.++|||++|++++.|.+  +. ..+|.++|||++|+|+++|+++++
T Consensus         2 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~   81 (333)
T 1wly_A            2 VMAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTD   81 (333)
T ss_dssp             CEEEEESSCSSGGGEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHC----------CCEECCCEEEEEEEEECTTCCS
T ss_pred             cEEEEEcccCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEEEEEEECCCCCC
Confidence            899999988754  8999999999999999999999999999999998865  22 457999999999999999999999


Q ss_pred             CCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECC
Q 018072           86 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN  165 (361)
Q Consensus        86 ~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP  165 (361)
                      |++||||+..+.                                                ..|+|+||+++|++.++++|
T Consensus        82 ~~~GdrV~~~~~------------------------------------------------~~G~~aey~~v~~~~~~~iP  113 (333)
T 1wly_A           82 FTVGERVCTCLP------------------------------------------------PLGAYSQERLYPAEKLIKVP  113 (333)
T ss_dssp             CCTTCEEEECSS------------------------------------------------SCCCSBSEEEEEGGGCEECC
T ss_pred             CCCCCEEEEecC------------------------------------------------CCCcceeEEEecHHHcEeCC
Confidence            999999975321                                                01489999999999999999


Q ss_pred             CCCChhh--hhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC
Q 018072          166 PLAPLDK--VCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT  242 (361)
Q Consensus       166 ~~~~~~~--aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~  242 (361)
                      +++++++  ||++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++++.++++|++
T Consensus       114 ~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~g~~  192 (333)
T 1wly_A          114 KDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKAETARKLGCH  192 (333)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCS
T ss_pred             CCCChHHhCccchhhhHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCC
Confidence            9999999  99999999999999877889999999999997 9999999999999999 999999999999999999999


Q ss_pred             EEEcCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChh-hh-ccc--cE
Q 018072          243 DFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NV-LNE--RT  317 (361)
Q Consensus       243 ~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~-~~-~~~--~~  317 (361)
                      .++++.+.+  +.+.+.+.+.+ ++|++||++|+ ..++.++++++++ |+++.+|..... ...++.. .+ .|+  ++
T Consensus       193 ~~~d~~~~~--~~~~i~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~-~~~~~~~~~~~~~~~~~~  267 (333)
T 1wly_A          193 HTINYSTQD--FAEVVREITGGKGVDVVYDSIGK-DTLQKSLDCLRPR-GMCAAYGHASGV-ADPIRVVEDLGVRGSLFI  267 (333)
T ss_dssp             EEEETTTSC--HHHHHHHHHTTCCEEEEEECSCT-TTHHHHHHTEEEE-EEEEECCCTTCC-CCCCCHHHHTTTTTSCEE
T ss_pred             EEEECCCHH--HHHHHHHHhCCCCCeEEEECCcH-HHHHHHHHhhccC-CEEEEEecCCCC-cCCCChhHhhhhcCCcEE
Confidence            999887655  77788877765 89999999999 8899999999997 999999976532 2233333 33 488  99


Q ss_pred             EEEeeecCCCc----CCcHHHHHHHHHcCCcc
Q 018072          318 LKGTFFGNYKP----RTDLPSVVDMYMNKVIR  345 (361)
Q Consensus       318 l~g~~~~~~~~----~~~~~~~~~~~~~~~l~  345 (361)
                      +.|++...+..    .++++++++++++|+++
T Consensus       268 i~g~~~~~~~~~~~~~~~~~~~~~l~~~g~l~  299 (333)
T 1wly_A          268 TRPALWHYMSNRSEIDEGSKCLFDAVKAGVLH  299 (333)
T ss_dssp             ECCCGGGGSCSHHHHHHHHHHHHHHHHTTSCC
T ss_pred             EEEeehhhccCHHHHHHHHHHHHHHHHCCCcC
Confidence            98876532211    23688999999999884

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=8.6e-45  Score=340.41  Aligned_cols=282  Identities=21%  Similarity=0.263  Sum_probs=240.5

Q ss_pred             eeEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 018072           11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEV   88 (361)
Q Consensus        11 m~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~   88 (361)
                      |||+++.+++.+  +++++.|.|+|+++||+|||.++|||++|++++.|.++...+|.++|||++|+|+++|+++++|++
T Consensus         2 Mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~~   81 (327)
T 1qor_A            2 ATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKA   81 (327)
T ss_dssp             CEEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCSCEEEEEEEECTTCCSCCT
T ss_pred             cEEEEEcCCCChhheEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCCCceeEEEEEEECCCCCCCCC
Confidence            899999987754  889999999999999999999999999999999887655568999999999999999999999999


Q ss_pred             CCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCC
Q 018072           89 GDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA  168 (361)
Q Consensus        89 Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~  168 (361)
                      ||||...                            |.  .                  .|+|+||+++|++.++++|+++
T Consensus        82 GdrV~~~----------------------------g~--~------------------~G~~aey~~v~~~~~~~iP~~l  113 (327)
T 1qor_A           82 GDRVVYA----------------------------QS--A------------------LGAYSSVHNIIADKAAILPAAI  113 (327)
T ss_dssp             TCEEEES----------------------------CC--S------------------SCCSBSEEEEEGGGEEECCTTS
T ss_pred             CCEEEEC----------------------------CC--C------------------CceeeeEEEecHHHcEECCCCC
Confidence            9999421                            00  0                  1489999999999999999999


Q ss_pred             ChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcC
Q 018072          169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  247 (361)
Q Consensus       169 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~  247 (361)
                      ++++||++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++++.++++|++.++++
T Consensus       114 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~g~~~~~~~  192 (327)
T 1qor_A          114 SFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVINY  192 (327)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEET
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEEC
Confidence            999999999999999999877889999999999996 9999999999999999 99999999999999999999999988


Q ss_pred             CCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-c-ccEEEEeeec
Q 018072          248 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-N-ERTLKGTFFG  324 (361)
Q Consensus       248 ~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~-~~~l~g~~~~  324 (361)
                      .+.+  +.+.+.+.+.+ ++|++||++| ...++.++++++++ |+++.+|..... ...++...++ + ++++.+...+
T Consensus       193 ~~~~--~~~~~~~~~~~~~~D~vi~~~g-~~~~~~~~~~l~~~-G~iv~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  267 (327)
T 1qor_A          193 REED--LVERLKEITGGKKVRVVYDSVG-RDTWERSLDCLQRR-GLMVSFGNSSGA-VTGVNLGILNQKGSLYVTRPSLQ  267 (327)
T ss_dssp             TTSC--HHHHHHHHTTTCCEEEEEECSC-GGGHHHHHHTEEEE-EEEEECCCTTCC-CCCBCTHHHHHTTSCEEECCCHH
T ss_pred             CCcc--HHHHHHHHhCCCCceEEEECCc-hHHHHHHHHHhcCC-CEEEEEecCCCC-CCccCHHHHhhccceEEEccchh
Confidence            7655  77788887766 8999999999 58999999999997 999999976532 2223333333 6 7888765432


Q ss_pred             CCC-----cCCcHHHHHHHHHcCCccc
Q 018072          325 NYK-----PRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       325 ~~~-----~~~~~~~~~~~~~~~~l~~  346 (361)
                      .+.     ..+.++++++++++|+++.
T Consensus       268 ~~~~~~~~~~~~~~~~~~l~~~g~l~~  294 (327)
T 1qor_A          268 GYITTREELTEASNELFSLIASGVIKV  294 (327)
T ss_dssp             HHCCSHHHHHHHHHHHHHHHHTTSSCC
T ss_pred             hhcCCHHHHHHHHHHHHHHHHCCCccc
Confidence            221     1345789999999999865

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=2.1e-44  Score=342.30  Aligned_cols=284  Identities=18%  Similarity=0.232  Sum_probs=242.0

Q ss_pred             cccceeEEEeecCCC----CeEE-EEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeC
Q 018072            7 LILTCKAAVAWEAGK----PLII-QDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVG   80 (361)
Q Consensus         7 ~~~~m~a~~~~~~~~----~~~~-~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G   80 (361)
                      +|.+|||+++.+++.    .+++ +++|.|+|+++||||||.++|||++|++++.|.++. ..+|.++|||++|+|+++|
T Consensus        20 ~~~~MkA~~~~~~g~~~~~~l~~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~i~G~E~~G~V~~vG   99 (362)
T 2c0c_A           20 FQSMMQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEVVALG   99 (362)
T ss_dssp             HCCEEEEEEECSCCSSHHHHEEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHTTTTCTTCCSCEECCSEEEEEEEEEC
T ss_pred             chhhceEEEEeecCCCccceeEEEeecCCCCCCCCeEEEEEEEeccCHHHHHHhcCCCCCCCCCCCCCCceeEEEEEEEC
Confidence            578899999999875    3889 999999999999999999999999999999886543 4679999999999999999


Q ss_pred             CCCC-CCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEecc
Q 018072           81 EGVS-DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG  159 (361)
Q Consensus        81 ~~v~-~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~  159 (361)
                      ++|+ .|++||||+...                                                  .|+|+||+++|++
T Consensus       100 ~~V~~~~~vGdrV~~~~--------------------------------------------------~G~~aey~~v~~~  129 (362)
T 2c0c_A          100 LSASARYTVGQAVAYMA--------------------------------------------------PGSFAEYTVVPAS  129 (362)
T ss_dssp             TTGGGTCCTTCEEEEEC--------------------------------------------------SCCSBSEEEEEGG
T ss_pred             CCccCCCCCCCEEEEcc--------------------------------------------------CCcceeEEEEcHH
Confidence            9999 999999998531                                                  1489999999999


Q ss_pred             ceEECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH
Q 018072          160 CVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK  238 (361)
Q Consensus       160 ~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~  238 (361)
                      .++++|+. + .++|++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++++++++
T Consensus       130 ~~~~~P~~-~-~~aaal~~~~~ta~~al~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~  206 (362)
T 2c0c_A          130 IATPVPSV-K-PEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKS  206 (362)
T ss_dssp             GCEECSSS-C-HHHHTTTTHHHHHHHHHHHHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH
T ss_pred             HeEECCCC-c-hHhhcccchHHHHHHHHHHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHH
Confidence            99999996 3 4667788899999999888889999999999995 9999999999999999 89999999999999999


Q ss_pred             cCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCc------ee---ecCh
Q 018072          239 FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA------VF---MTKP  309 (361)
Q Consensus       239 ~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~------~~---~~~~  309 (361)
                      +|++.++++.+.+  +.+.+++.+++++|++||++|+ ..+..++++++++ |+++.+|......      .+   .+..
T Consensus       207 ~Ga~~~~~~~~~~--~~~~~~~~~~~g~D~vid~~g~-~~~~~~~~~l~~~-G~iv~~g~~~~~~~~~~~~~~~~~~~~~  282 (362)
T 2c0c_A          207 LGCDRPINYKTEP--VGTVLKQEYPEGVDVVYESVGG-AMFDLAVDALATK-GRLIVIGFISGYQTPTGLSPVKAGTLPA  282 (362)
T ss_dssp             TTCSEEEETTTSC--HHHHHHHHCTTCEEEEEECSCT-HHHHHHHHHEEEE-EEEEECCCGGGTTSSSCCCCCCCTTHHH
T ss_pred             cCCcEEEecCChh--HHHHHHHhcCCCCCEEEECCCH-HHHHHHHHHHhcC-CEEEEEeCCCCcCcccccccccccccHH
Confidence            9999999987655  7778887775589999999998 7889999999997 9999999754221      00   1222


Q ss_pred             hhhccccEEEEeeecCCC--cCCcHHHHHHHHHcCCcccC
Q 018072          310 INVLNERTLKGTFFGNYK--PRTDLPSVVDMYMNKVIRFS  347 (361)
Q Consensus       310 ~~~~~~~~l~g~~~~~~~--~~~~~~~~~~~~~~~~l~~~  347 (361)
                      ..+.+++++.|++.+.+.  .+++++++++++++|++++.
T Consensus       283 ~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~  322 (362)
T 2c0c_A          283 KLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCE  322 (362)
T ss_dssp             HHHHHTCEEEECCGGGCGGGHHHHHHHHHHHHHTTCSCCC
T ss_pred             HHHhhcceEEEEEhhhhhhhHHHHHHHHHHHHHCCCeEee
Confidence            233499999998765432  24578999999999998653

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=6.1e-44  Score=335.85  Aligned_cols=280  Identities=17%  Similarity=0.215  Sum_probs=236.9

Q ss_pred             ccceeEEEeec--C----CCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccc----eeEEEE
Q 018072            8 ILTCKAAVAWE--A----GKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHE----AAGVVE   77 (361)
Q Consensus         8 ~~~m~a~~~~~--~----~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e----~~G~V~   77 (361)
                      +++|||+++.+  +    .+.++++++|.|+|+++||||||.++|||++|+..+.+... ..+|.++|||    ++|+|+
T Consensus         5 ~~~mka~v~~~~~~g~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~d~~~~~~~~~-~~~p~~~G~e~g~~~~G~V~   83 (336)
T 4b7c_A            5 SQINRQYQLAQRPSGLPGRDTFSFVETPLGEPAEGQILVKNEYLSLDPAMRGWMNDARS-YIPPVGIGEVMRALGVGKVL   83 (336)
T ss_dssp             -CEEEEEEECSCCSSSCCTTSEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHHSCSCC-SSCCCCTTSBCCCEEEEEEE
T ss_pred             cccccEEEEEecCCCCCCCCceEEEeccCCCCCCCEEEEEEEEEEeCHHHHhhhhcccc-cCCCCCCCcccCCceEEEEE
Confidence            36799999985  1    12399999999999999999999999999999988776432 3557788888    799999


Q ss_pred             EeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEe
Q 018072           78 SVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVH  157 (361)
Q Consensus        78 ~~G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~  157 (361)
                      +  +++++|++||||+..                                                    |+|+||+++|
T Consensus        84 ~--~~v~~~~vGdrV~~~----------------------------------------------------G~~aey~~v~  109 (336)
T 4b7c_A           84 V--SKHPGFQAGDYVNGA----------------------------------------------------LGVQDYFIGE  109 (336)
T ss_dssp             E--ECSTTCCTTCEEEEE----------------------------------------------------CCSBSEEEEC
T ss_pred             e--cCCCCCCCCCEEecc----------------------------------------------------CCceEEEEec
Confidence            9  458899999999842                                                    3899999999


Q ss_pred             ccceEECCCCCChhhh--hccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 018072          158 SGCVAKINPLAPLDKV--CILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE  234 (361)
Q Consensus       158 ~~~~~~iP~~~~~~~a--a~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~  234 (361)
                      ++.++++|+++++.++  +++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++++
T Consensus       110 ~~~~~~~P~~~~~~~~a~a~l~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~  188 (336)
T 4b7c_A          110 PKGFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCR  188 (336)
T ss_dssp             CTTCEEECTTTSCGGGGGTTTSHHHHHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHH
T ss_pred             hHHeEEcCCCCCchHHHhhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHH
Confidence            9999999999987776  7788899999999888999999999999998 9999999999999999 9999999999999


Q ss_pred             HH-HHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCC-----ceeecC
Q 018072          235 EA-KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD-----AVFMTK  308 (361)
Q Consensus       235 ~~-~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~-----~~~~~~  308 (361)
                      .+ +++|++.++++.+.+  +.+.+.+.+++++|++||++|+ +.+..++++++++ |+++.+|.....     ....++
T Consensus       189 ~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~~  264 (336)
T 4b7c_A          189 FLVEELGFDGAIDYKNED--LAAGLKRECPKGIDVFFDNVGG-EILDTVLTRIAFK-ARIVLCGAISQYNNKEAVRGPAN  264 (336)
T ss_dssp             HHHHTTCCSEEEETTTSC--HHHHHHHHCTTCEEEEEESSCH-HHHHHHHTTEEEE-EEEEECCCGGGGC------CCTT
T ss_pred             HHHHHcCCCEEEECCCHH--HHHHHHHhcCCCceEEEECCCc-chHHHHHHHHhhC-CEEEEEeecccccCCcccccchh
Confidence            99 899999999988765  8888888886699999999997 7889999999997 999999975521     112333


Q ss_pred             hhhhc-cccEEEEeeecCCCc--CCcHHHHHHHHHcCCcccC
Q 018072          309 PINVL-NERTLKGTFFGNYKP--RTDLPSVVDMYMNKVIRFS  347 (361)
Q Consensus       309 ~~~~~-~~~~l~g~~~~~~~~--~~~~~~~~~~~~~~~l~~~  347 (361)
                      ...++ +++++.|++.+.+..  +++++++++++++|++++.
T Consensus       265 ~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~  306 (336)
T 4b7c_A          265 YLSLLVNRARMEGMVVMDYAQRFPEGLKEMATWLAEGKLQSR  306 (336)
T ss_dssp             TTHHHHTTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCCC
T ss_pred             HHHHHhCCcEEEEEEhhhhhhhhHHHHHHHHHHHHCCCcccc
Confidence            33344 999999998765421  3578899999999998553

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=100.00  E-value=5.8e-45  Score=341.11  Aligned_cols=280  Identities=18%  Similarity=0.179  Sum_probs=232.9

Q ss_pred             eeEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 018072           11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE   87 (361)
Q Consensus        11 m~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~~~~   87 (361)
                      |||+++.+++++  ++++++|.|+|+++||||||.++|||++|++++.|.++. .++|.++|||++|+|+++|  +++|+
T Consensus         1 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~G--v~~~~   78 (324)
T 3nx4_A            1 MQALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFPMIPGIDFAGTVHASE--DPRFH   78 (324)
T ss_dssp             CEEEEEEESSSSEEEEEEECCGGGSCCCSEEEEEEEEEECHHHHHHHHTCTTCCCSSSBCCCSEEEEEEEEES--STTCC
T ss_pred             CceEEEecCCCCceeeEeecCCCCCCCCEEEEEEEEEeCCHHHHhhhcCCCCCCCCCCccccceeEEEEEEeC--CCCCC
Confidence            899999999986  889999999999999999999999999999999987654 5789999999999999998  57899


Q ss_pred             CCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072           88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  167 (361)
Q Consensus        88 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~  167 (361)
                      +||||++.+   |.                     .|.                   ...|+|+||+++|++.++++|++
T Consensus        79 vGdrV~~~~---~~---------------------~g~-------------------~~~G~~aey~~v~~~~~~~iP~~  115 (324)
T 3nx4_A           79 AGQEVLLTG---WG---------------------VGE-------------------NHWGGLAERARVKGDWLVALPAG  115 (324)
T ss_dssp             TTCEEEEEC---TT---------------------BTT-------------------TBCCSSBSEEEECGGGCEECCTT
T ss_pred             CCCEEEEcc---cc---------------------cCC-------------------CCCCceeeEEecCHHHcEECCCC
Confidence            999999753   10                     011                   11358999999999999999999


Q ss_pred             CChhhhhccccchhhhhhhhh--hhcCCCCCC-EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCE
Q 018072          168 APLDKVCILSCGVSTGLGATL--NVAKPERGS-SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD  243 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~--~~~~~~~g~-~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~  243 (361)
                      +++++||++++++.|||+++.  ...++++++ +|||+|+ |++|++++|+|+.+|+ +|++++++++|+++++++|+++
T Consensus       116 ~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~  194 (324)
T 3nx4_A          116 LSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGY-QVAAVSGRESTHGYLKSLGANR  194 (324)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTCSE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHhhhcccCCCCCeEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCE
Confidence            999999999999999998874  446677743 4999998 9999999999999999 9999999999999999999999


Q ss_pred             EEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh-ccccEEEEee
Q 018072          244 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTF  322 (361)
Q Consensus       244 vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~l~g~~  322 (361)
                      ++++.+.+  .   ++.++++++|++||++|+ +.++.++++++++ |+++.+|..... ...++...+ .+++++.|++
T Consensus       195 vi~~~~~~--~---~~~~~~~~~d~v~d~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~~~~~~~~~~g~~  266 (324)
T 3nx4_A          195 ILSRDEFA--E---SRPLEKQLWAGAIDTVGD-KVLAKVLAQMNYG-GCVAACGLAGGF-ALPTTVMPFILRNVRLQGVD  266 (324)
T ss_dssp             EEEGGGSS--C---CCSSCCCCEEEEEESSCH-HHHHHHHHTEEEE-EEEEECCCTTCS-EEEEESHHHHHHCCEEEECC
T ss_pred             EEecCCHH--H---HHhhcCCCccEEEECCCc-HHHHHHHHHHhcC-CEEEEEecCCCC-CCCCCHHHHhhcCeEEEEEe
Confidence            99987654  1   444555689999999998 5899999999998 999999987633 334433334 4999999987


Q ss_pred             ecCCCc---CCcHHHHHHHHHcCCc
Q 018072          323 FGNYKP---RTDLPSVVDMYMNKVI  344 (361)
Q Consensus       323 ~~~~~~---~~~~~~~~~~~~~~~l  344 (361)
                      ......   .+.++++++++++|++
T Consensus       267 ~~~~~~~~~~~~~~~~~~l~~~g~l  291 (324)
T 3nx4_A          267 SVMTPPARRAEAWARLVKDLPESFY  291 (324)
T ss_dssp             STTCCHHHHHHHHHHHHHHSCHHHH
T ss_pred             ccccChHHHHHHHHHHHHHHHcCCC
Confidence            544321   2456778888877766

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=100.00  E-value=6.1e-43  Score=333.85  Aligned_cols=287  Identities=22%  Similarity=0.242  Sum_probs=229.8

Q ss_pred             ccccccceeEEEeecCCCC--eEE-EEeecCCC-CCCeEEEEEeEEecCccchhccccCCC-------------C--CCC
Q 018072            4 TAGLILTCKAAVAWEAGKP--LII-QDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQ-------------T--PLF   64 (361)
Q Consensus         4 ~~~~~~~m~a~~~~~~~~~--~~~-~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~-------------~--~~~   64 (361)
                      |..++.+|||+++.+++.+  +++ +++|.|.| +++||||||.++|||++|++++.|..+             .  ..+
T Consensus        15 ~~~~~~~mka~~~~~~g~~~~l~~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~~~   94 (375)
T 2vn8_A           15 TENLYFQSMAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEF   94 (375)
T ss_dssp             ---CCCCEEEEEBSSCCSGGGCEEEEEECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTTTC
T ss_pred             ccccCccceeEEeccCCCccceEEeccccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCccccccccccccccccccccC
Confidence            4456788999999998754  888 99999985 999999999999999999999887531             1  237


Q ss_pred             CcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccc
Q 018072           65 PRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHF  144 (361)
Q Consensus        65 p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~  144 (361)
                      |.++|||++|+|+++|+++++|++||+|++.+..                                              
T Consensus        95 P~v~G~E~~G~V~~vG~~V~~~~vGDrV~~~~~~----------------------------------------------  128 (375)
T 2vn8_A           95 PLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPP----------------------------------------------  128 (375)
T ss_dssp             SBCCCCEEEEEEEEECTTCCSCCTTCEEEEECCT----------------------------------------------
T ss_pred             CcccceeeeEEEEEeCCCCCCCCCCCEEEEecCC----------------------------------------------
Confidence            9999999999999999999999999999865310                                              


Q ss_pred             cCcccceeeEEEeccceEECCCCCChhhhhccccchhhhhhhhhhhcC----CCCCCEEEEEcC-CHHHHHHHHHHHHcC
Q 018072          145 LGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAK----PERGSSVAVFGL-GAVGLAAAEGARIAG  219 (361)
Q Consensus       145 ~~~G~~ae~v~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~----~~~g~~VlI~G~-g~vG~~a~~~a~~~g  219 (361)
                      ...|+|+||+++|++.++++|+++++++||++++++.|||+++.+.++    +++|++|||+|+ |++|++++|+|+..|
T Consensus       129 ~~~G~~aey~~v~~~~~~~iP~~ls~~~Aa~l~~~~~tA~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~G  208 (375)
T 2vn8_A          129 WKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWD  208 (375)
T ss_dssp             TSCCSSBSEEEEEGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTT
T ss_pred             CCCccceeEEEEcHHHeeeCCCCCCHHHHhhhHHHHHHHHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCC
Confidence            012489999999999999999999999999999899999999877788    999999999995 999999999999999


Q ss_pred             CCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCCh-HHHHHHHHHhcCCCcEEEEEcC
Q 018072          220 ASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI-DNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       220 ~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~-~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      + +|++++ +++++++++++|++.++++.+.+  +.+.+.+.  +++|++||++|++ ..+..++++++++ |+++.+|.
T Consensus       209 a-~Vi~~~-~~~~~~~~~~lGa~~v~~~~~~~--~~~~~~~~--~g~D~vid~~g~~~~~~~~~~~~l~~~-G~iv~~g~  281 (375)
T 2vn8_A          209 A-HVTAVC-SQDASELVRKLGADDVIDYKSGS--VEEQLKSL--KPFDFILDNVGGSTETWAPDFLKKWSG-ATYVTLVT  281 (375)
T ss_dssp             C-EEEEEE-CGGGHHHHHHTTCSEEEETTSSC--HHHHHHTS--CCBSEEEESSCTTHHHHGGGGBCSSSC-CEEEESCC
T ss_pred             C-EEEEEe-ChHHHHHHHHcCCCEEEECCchH--HHHHHhhc--CCCCEEEECCCChhhhhHHHHHhhcCC-cEEEEeCC
Confidence            9 899987 67899999999999999987655  66666543  4899999999996 4668889999998 99999996


Q ss_pred             CCCCce----eecCh----hhh-c-------cccEEEEeeecCCCcCCcHHHHHHHHHcCCcc
Q 018072          299 PSKDAV----FMTKP----INV-L-------NERTLKGTFFGNYKPRTDLPSVVDMYMNKVIR  345 (361)
Q Consensus       299 ~~~~~~----~~~~~----~~~-~-------~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l~  345 (361)
                      ......    +....    ..+ .       ++..+.+.+.  ....++++++++++++|+++
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~l~~~g~l~  342 (375)
T 2vn8_A          282 PFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFF--MASGPCLDDIAELVDAGKIR  342 (375)
T ss_dssp             SHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEEEECCC--CCCHHHHHHHHHHHHTTSCC
T ss_pred             CcccccccccccchhheeehhhccccccccccCcceEEEEe--CCCHHHHHHHHHHHHCCCcc
Confidence            542110    00000    011 1       3444443321  11245679999999999884

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=100.00  E-value=7.4e-44  Score=334.46  Aligned_cols=285  Identities=16%  Similarity=0.172  Sum_probs=226.3

Q ss_pred             ccceeEEEeecCCC--CeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCC
Q 018072            8 ILTCKAAVAWEAGK--PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVS   84 (361)
Q Consensus         8 ~~~m~a~~~~~~~~--~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~   84 (361)
                      |.+|||+++.+++.  .++++++|.|+|+++||||||.++|||++|++++.|.++. ..+|.++|||++|+|+++  +++
T Consensus         2 ~~~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~~--~v~   79 (330)
T 1tt7_A            2 STLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVSS--NDP   79 (330)
T ss_dssp             CCEEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEEC--SST
T ss_pred             CCcceEEEEecCCCCcceeEeecCCCCCCCCEEEEEEEEEecCHHHHhhhcCCCCCcCCCCccccceEEEEEEEc--CCC
Confidence            56799999999872  3899999999999999999999999999999999886543 357999999999999996  468


Q ss_pred             CCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEEC
Q 018072           85 DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI  164 (361)
Q Consensus        85 ~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~i  164 (361)
                      +|++||||++.+..                        +|.                   ...|+|+||+++|++.++++
T Consensus        80 ~~~vGdrV~~~~~~------------------------~g~-------------------~~~G~~aey~~v~~~~~~~i  116 (330)
T 1tt7_A           80 RFAEGDEVIATSYE------------------------LGV-------------------SRDGGLSEYASVPGDWLVPL  116 (330)
T ss_dssp             TCCTTCEEEEESTT------------------------BTT-------------------TBCCSSBSSEEECGGGEEEC
T ss_pred             CCCCCCEEEEcccc------------------------cCC-------------------CCCccceeEEEecHHHeEEC
Confidence            89999999865310                        011                   11258999999999999999


Q ss_pred             CCCCChhhhhccccchhhhhhhhh--hhcCCCCCC-EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcC
Q 018072          165 NPLAPLDKVCILSCGVSTGLGATL--NVAKPERGS-SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG  240 (361)
Q Consensus       165 P~~~~~~~aa~l~~~~~ta~~a~~--~~~~~~~g~-~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G  240 (361)
                      |+++++++||++++++.|||.++.  +..++++|+ +|||+|+ |++|++++|+|+.+|+ +|++++++++|+++++++|
T Consensus       117 P~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lG  195 (330)
T 1tt7_A          117 PQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQLG  195 (330)
T ss_dssp             CTTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHHT
T ss_pred             CCCCCHHHHhhccchHHHHHHHHHHHHhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcC
Confidence            999999999999999999998764  457789997 9999998 9999999999999999 7999999999999999999


Q ss_pred             CCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh-ccccEEE
Q 018072          241 VTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLK  319 (361)
Q Consensus       241 ~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~l~  319 (361)
                      +++++++.+.+   .+.++.++++++|++||++|+ +.+..++++++++ |+++.+|.... ....++...+ .+++++.
T Consensus       196 a~~v~~~~~~~---~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~iv~~G~~~~-~~~~~~~~~~~~~~~~i~  269 (330)
T 1tt7_A          196 ASEVISREDVY---DGTLKALSKQQWQGAVDPVGG-KQLASLLSKIQYG-GSVAVSGLTGG-GEVPATVYPFILRGVSLL  269 (330)
T ss_dssp             CSEEEEHHHHC---SSCCCSSCCCCEEEEEESCCT-HHHHHHHTTEEEE-EEEEECCCSSC-SCEEECSHHHHTSCCEEE
T ss_pred             CcEEEECCCch---HHHHHHhhcCCccEEEECCcH-HHHHHHHHhhcCC-CEEEEEecCCC-CccCcchHHHHhcCeEEE
Confidence            99998754311   011223333489999999999 6899999999997 99999998653 2233333333 4999999


Q ss_pred             EeeecCCC---cCCcHHHHHHHHHcCCc
Q 018072          320 GTFFGNYK---PRTDLPSVVDMYMNKVI  344 (361)
Q Consensus       320 g~~~~~~~---~~~~~~~~~~~~~~~~l  344 (361)
                      |++.....   ..+.+++++++++++++
T Consensus       270 g~~~~~~~~~~~~~~~~~~~~~~~~g~l  297 (330)
T 1tt7_A          270 GIDSVYCPMDVRAAVWERMSSDLKPDQL  297 (330)
T ss_dssp             ECCSSSCCHHHHHHHHHHTTTTSCCSCS
T ss_pred             EEeccccCHHHHHHHHHHHHHHHhcCCc
Confidence            98532211   11234555666666665

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=5.7e-43  Score=328.20  Aligned_cols=282  Identities=17%  Similarity=0.149  Sum_probs=221.9

Q ss_pred             cceeEEEeecCCC--CeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCCC
Q 018072            9 LTCKAAVAWEAGK--PLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSD   85 (361)
Q Consensus         9 ~~m~a~~~~~~~~--~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~~   85 (361)
                      .+|||+++.+++.  .++++++|.|+|+++||||||.++|||++|++++.|.++. ..+|.++|||++|+|++.  ++++
T Consensus         2 ~~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~--~v~~   79 (328)
T 1xa0_A            2 SAFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVSS--QHPR   79 (328)
T ss_dssp             CEEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEEC--CSSS
T ss_pred             CcceEEEEecCCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHhhcCCCCCCCCCCcccCcceEEEEEec--CCCC
Confidence            4699999999883  3889999999999999999999999999999999886543 457999999999999995  5688


Q ss_pred             CCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECC
Q 018072           86 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN  165 (361)
Q Consensus        86 ~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP  165 (361)
                      |++||||++.+..                        +|.                   ...|+|+||+++|++.++++|
T Consensus        80 ~~vGdrV~~~~~~------------------------~g~-------------------~~~G~~aey~~v~~~~~~~~P  116 (328)
T 1xa0_A           80 FREGDEVIATGYE------------------------IGV-------------------THFGGYSEYARLHGEWLVPLP  116 (328)
T ss_dssp             CCTTCEEEEESTT------------------------BTT-------------------TBCCSSBSEEEECGGGCEECC
T ss_pred             CCCCCEEEEcccc------------------------CCC-------------------CCCccceeEEEechHHeEECC
Confidence            9999999865210                        011                   112589999999999999999


Q ss_pred             CCCChhhhhccccchhhhhhhhh--hhcCCCCCC-EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCC
Q 018072          166 PLAPLDKVCILSCGVSTGLGATL--NVAKPERGS-SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV  241 (361)
Q Consensus       166 ~~~~~~~aa~l~~~~~ta~~a~~--~~~~~~~g~-~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~  241 (361)
                      +++++++||++++++.|||.++.  +..++++|+ +|||+|+ |++|++++|+|+.+|+ +|++++++++++++++++|+
T Consensus       117 ~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lGa  195 (328)
T 1xa0_A          117 KGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLGA  195 (328)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTTC
T ss_pred             CCCCHHHhhhhhhhHHHHHHHHHHHhhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCC
Confidence            99999999999999999998764  457889997 9999998 9999999999999999 79999999999999999999


Q ss_pred             CEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh-ccccEEEE
Q 018072          242 TDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKG  320 (361)
Q Consensus       242 ~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~l~g  320 (361)
                      ++++++.+.+   .+.++.+.++++|++||++|+ +.+..++++++++ |+++.+|.... ....++...+ .|++++.|
T Consensus       196 ~~~i~~~~~~---~~~~~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~G~~~~-~~~~~~~~~~~~~~~~i~g  269 (328)
T 1xa0_A          196 KEVLAREDVM---AERIRPLDKQRWAAAVDPVGG-RTLATVLSRMRYG-GAVAVSGLTGG-AEVPTTVHPFILRGVSLLG  269 (328)
T ss_dssp             SEEEECC------------CCSCCEEEEEECSTT-TTHHHHHHTEEEE-EEEEECSCCSS-SCCCCCSHHHHHTTCEEEE
T ss_pred             cEEEecCCcH---HHHHHHhcCCcccEEEECCcH-HHHHHHHHhhccC-CEEEEEeecCC-CCCCCchhhhhhcCceEEE
Confidence            9999876532   223444444589999999999 6899999999997 99999997653 2233333333 49999999


Q ss_pred             eeecCCC---cCCcHHHHHHHHHcC
Q 018072          321 TFFGNYK---PRTDLPSVVDMYMNK  342 (361)
Q Consensus       321 ~~~~~~~---~~~~~~~~~~~~~~~  342 (361)
                      +......   ..+.+++++++++++
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~g  294 (328)
T 1xa0_A          270 IDSVYCPMDLRLRIWERLAGDLKPD  294 (328)
T ss_dssp             CCSSSCCHHHHHHHHHHHHTTTCCC
T ss_pred             EecccCCHHHHHHHHHHHHHHHHcC
Confidence            7532211   012345555555544

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=3.9e-42  Score=326.18  Aligned_cols=283  Identities=15%  Similarity=0.194  Sum_probs=236.7

Q ss_pred             cccceeEEEe-ecC---CC----CeEEEEeecCCC-CCCeEEEEEeEEecCccchhcccc----CCC-CCCCCcccccce
Q 018072            7 LILTCKAAVA-WEA---GK----PLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWES----KGQ-TPLFPRIFGHEA   72 (361)
Q Consensus         7 ~~~~m~a~~~-~~~---~~----~~~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g----~~~-~~~~p~~~G~e~   72 (361)
                      +|++|||+++ ..+   |.    .++++++|.|+| +++||||||.++|||++|+..+.+    .+. ...+|.++|||+
T Consensus         5 ~~~~mka~v~~~~~~~~g~p~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~~~~~~p~v~G~E~   84 (357)
T 2zb4_A            5 AAMIVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGG   84 (357)
T ss_dssp             -CCEEEEEEECCCCCTTSCCCGGGEEEEEEECCSCCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSSCCCCBTSBCEEEE
T ss_pred             ccccceEEEEeccCCCCCCCCcCceEEEeecCCCCCCCCeEEEEEEEEecCHHHHhhccccccccccCCCCCCccccccE
Confidence            5789999999 565   42    399999999999 999999999999999999987765    222 235789999999


Q ss_pred             eEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCccccee
Q 018072           73 AGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSE  152 (361)
Q Consensus        73 ~G~V~~~G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae  152 (361)
                      +|+|++  +++++|++||||++.                                                   .|+|+|
T Consensus        85 ~G~V~~--~~v~~~~vGdrV~~~---------------------------------------------------~G~~ae  111 (357)
T 2zb4_A           85 IGIIEE--SKHTNLTKGDFVTSF---------------------------------------------------YWPWQT  111 (357)
T ss_dssp             EEEEEE--ECSTTCCTTCEEEEE---------------------------------------------------EEESBS
T ss_pred             EEEEEe--cCCCCCCCCCEEEec---------------------------------------------------CCCcEE
Confidence            999999  889999999999843                                                   148999


Q ss_pred             eEEEeccceEECCCCC-----ChhhhhccccchhhhhhhhhhhcCCCCC--CEEEEEcC-CHHHHHHHHHHHHcCCCeEE
Q 018072          153 YTVVHSGCVAKINPLA-----PLDKVCILSCGVSTGLGATLNVAKPERG--SSVAVFGL-GAVGLAAAEGARIAGASRII  224 (361)
Q Consensus       153 ~v~v~~~~~~~iP~~~-----~~~~aa~l~~~~~ta~~a~~~~~~~~~g--~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi  224 (361)
                      |+++|++.++++|+++     +++ ++++++++.|||+++.+.+++++|  ++|||+|+ |++|++++|+|+..|+.+|+
T Consensus       112 y~~v~~~~~~~iP~~~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi  190 (357)
T 2zb4_A          112 KVILDGNSLEKVDPQLVDGHLSYF-LGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVV  190 (357)
T ss_dssp             EEEEEGGGCEECCGGGGTTCGGGG-GTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEE
T ss_pred             EEEEchHHceecCcccccCchhHH-HHhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEE
Confidence            9999999999999998     554 677888999999998788999999  99999998 99999999999999987899


Q ss_pred             EEcCChhhHHHHHH-cCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCC-
Q 018072          225 GVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD-  302 (361)
Q Consensus       225 ~~~~~~~~~~~~~~-~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~-  302 (361)
                      ++++++++++.+++ +|++.++++.+.+  +.+.+.+.+.+++|++||++|+ ..+..++++++++ |+++.+|..... 
T Consensus       191 ~~~~~~~~~~~~~~~~g~~~~~d~~~~~--~~~~~~~~~~~~~d~vi~~~G~-~~~~~~~~~l~~~-G~iv~~G~~~~~~  266 (357)
T 2zb4_A          191 GICGTHEKCILLTSELGFDAAINYKKDN--VAEQLRESCPAGVDVYFDNVGG-NISDTVISQMNEN-SHIILCGQISQYN  266 (357)
T ss_dssp             EEESCHHHHHHHHHTSCCSEEEETTTSC--HHHHHHHHCTTCEEEEEESCCH-HHHHHHHHTEEEE-EEEEECCCGGGTT
T ss_pred             EEeCCHHHHHHHHHHcCCceEEecCchH--HHHHHHHhcCCCCCEEEECCCH-HHHHHHHHHhccC-cEEEEECCccccc
Confidence            99999999999987 9999999887654  7788888776689999999997 7889999999997 999999975432 


Q ss_pred             ceeecC--------hhhhccccEEEEeeecCCC--cCCcHHHHHHHHHcCCcccC
Q 018072          303 AVFMTK--------PINVLNERTLKGTFFGNYK--PRTDLPSVVDMYMNKVIRFS  347 (361)
Q Consensus       303 ~~~~~~--------~~~~~~~~~l~g~~~~~~~--~~~~~~~~~~~~~~~~l~~~  347 (361)
                      ..+++.        ...+.+++++.|++.+.+.  ..++++++++++++|++++.
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~  321 (357)
T 2zb4_A          267 KDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIK  321 (357)
T ss_dssp             SCCCSSCCCCHHHHHHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTCCCCC
T ss_pred             cCccccccchhhhhhhhhcceeEEEEeehhhhhHHHHHHHHHHHHHHHcCCCcCc
Confidence            233322        1223499999998764431  14568999999999998653

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=100.00  E-value=1.2e-42  Score=332.04  Aligned_cols=262  Identities=16%  Similarity=0.168  Sum_probs=220.3

Q ss_pred             ccceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCC---------------------------
Q 018072            8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---------------------------   60 (361)
Q Consensus         8 ~~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~---------------------------   60 (361)
                      ..+|||++.......++++++|.|+|+++||||||.++|||++|++++.|..+                           
T Consensus         5 ~~~mka~v~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~~~~~~~   84 (379)
T 3iup_A            5 ALQLRSRIKSSGELELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEGAMRSM   84 (379)
T ss_dssp             EEEEEEEECTTSEEEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCHHHHHHH
T ss_pred             hhhHHHHHhcCCCCceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccccCcccccccc
Confidence            57799999865444499999999999999999999999999999999887521                           


Q ss_pred             --CCCCCcccccceeEEEEEeCCCC-CCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccC
Q 018072           61 --TPLFPRIFGHEAAGVVESVGEGV-SDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSIN  137 (361)
Q Consensus        61 --~~~~p~~~G~e~~G~V~~~G~~v-~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~  137 (361)
                        ..++|.++|||++|+|+++|++| ++|++||+|++.+                                         
T Consensus        85 ~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~~~-----------------------------------------  123 (379)
T 3iup_A           85 AGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAIG-----------------------------------------  123 (379)
T ss_dssp             GGGTTEEEECCSCEEEEEEEECSSHHHHTTTTCEEEECC-----------------------------------------
T ss_pred             ccccCCCccceeeeEEEEEEeCCCcccCCCCCCEEEecC-----------------------------------------
Confidence              23478999999999999999999 8899999998542                                         


Q ss_pred             CCccccccCcccceeeEEEeccceEECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEE--cCCHHHHHHHHHH
Q 018072          138 GEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVF--GLGAVGLAAAEGA  215 (361)
Q Consensus       138 g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~--G~g~vG~~a~~~a  215 (361)
                               .|+|+||+++|++.++++|+++++++||++++...|||+++ +... ++|++|||+  |+|++|++++|+|
T Consensus       124 ---------~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~-~~~~-~~g~~vlV~gag~G~vG~~a~q~a  192 (379)
T 3iup_A          124 ---------GAMYSQYRCIPADQCLVLPEGATPADGASSFVNPLTALGMV-ETMR-LEGHSALVHTAAASNLGQMLNQIC  192 (379)
T ss_dssp             ---------SCCSBSEEEEEGGGEEECCTTCCHHHHTTSSHHHHHHHHHH-HHHH-HTTCSCEEESSTTSHHHHHHHHHH
T ss_pred             ---------CCcceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHH-HHhc-cCCCEEEEECCCCCHHHHHHHHHH
Confidence                     14899999999999999999999999999999999999764 4455 899999999  4599999999999


Q ss_pred             HHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhc-----CC
Q 018072          216 RIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVH-----DG  289 (361)
Q Consensus       216 ~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~-----~~  289 (361)
                      +.+|+ +|++++++++|+++++++|+++++++.+.+  +.+.+++++++ ++|+|||++|++..++.++++++     +.
T Consensus       193 ~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~~~~~~~--~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~  269 (379)
T 3iup_A          193 LKDGI-KLVNIVRKQEQADLLKAQGAVHVCNAASPT--FMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSA  269 (379)
T ss_dssp             HHHTC-CEEEEESSHHHHHHHHHTTCSCEEETTSTT--HHHHHHHHHHHHCCCEEEESCEEESHHHHHHHHHHHHHHTTC
T ss_pred             HHCCC-EEEEEECCHHHHHHHHhCCCcEEEeCCChH--HHHHHHHHhcCCCceEEEECCCchhhHHHHHHhcchhhhccc
Confidence            99999 899999999999999999999999988766  88899998877 99999999999778888888885     33


Q ss_pred             ----------CcEEEEEcCCCCCceeecChhhhccccEEEEeeecCC
Q 018072          290 ----------WGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY  326 (361)
Q Consensus       290 ----------~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~  326 (361)
                                +|+++.+|... ...+++. ..+.+++++.|++.+.+
T Consensus       270 G~~~~~G~~~~g~iv~~G~~~-~~~~~~~-~~~~~~~~i~g~~~~~~  314 (379)
T 3iup_A          270 REYSRYGSTTHKQVYLYGGLD-TSPTEFN-RNFGMAWGMGGWLLFPF  314 (379)
T ss_dssp             CSCCTTCCCSCEEEEECCCSE-EEEEEEC-CCSCSCEEEEECCHHHH
T ss_pred             cceeecccccCceEEEecCCC-CCccccc-cccccceEEEEEEeeee
Confidence                      05555555433 2233333 22448999999887654

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=100.00  E-value=1.9e-41  Score=314.24  Aligned_cols=262  Identities=20%  Similarity=0.258  Sum_probs=218.4

Q ss_pred             eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCCCCCCC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~~~~~G   89 (361)
                      |||+++.+++++..+++.|.|+|+++||+|||.++|||++|++++.|.++. ..+|.++|||++|+|+           |
T Consensus         1 Mka~~~~~~g~~~~l~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~-----------G   69 (302)
T 1iz0_A            1 MKAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVVE-----------G   69 (302)
T ss_dssp             CEEEEECSTTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEET-----------T
T ss_pred             CeEEEEcCCCCchheEECCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcccceEEEEEE-----------C
Confidence            899999999986567799999999999999999999999999999886543 3679999999999998           9


Q ss_pred             CEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCC
Q 018072           90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP  169 (361)
Q Consensus        90 d~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~  169 (361)
                      |||+..+.                                                 .|+|+||+++|++.++++|++++
T Consensus        70 drV~~~~~-------------------------------------------------~G~~aey~~v~~~~~~~iP~~~~  100 (302)
T 1iz0_A           70 RRYAALVP-------------------------------------------------QGGLAERVAVPKGALLPLPEGLS  100 (302)
T ss_dssp             EEEEEECS-------------------------------------------------SCCSBSEEEEEGGGCEECCTTCC
T ss_pred             cEEEEecC-------------------------------------------------CcceeeEEEEcHHHcEeCCCCCC
Confidence            99985421                                                 14899999999999999999999


Q ss_pred             hhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCC
Q 018072          170 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  248 (361)
Q Consensus       170 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~  248 (361)
                      +++||++++++.|||+++.+.. +++|++|||+|+ |++|++++|+|+..|+ +|++++++++++++++++|+++++++.
T Consensus       101 ~~~aa~l~~~~~ta~~~l~~~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~~~~  178 (302)
T 1iz0_A          101 PEEAAAFPVSFLTAYLALKRAQ-ARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAATYA  178 (302)
T ss_dssp             HHHHHTSHHHHHHHHHHHHHTT-CCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEEGG
T ss_pred             HHHHHHhhhHHHHHHHHHHHhc-CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEECC
Confidence            9999999999999999987677 999999999998 9999999999999999 999999999999999999999998875


Q ss_pred             C-CCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhh-hccccEEEEeeecCC
Q 018072          249 E-HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN-VLNERTLKGTFFGNY  326 (361)
Q Consensus       249 ~-~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~-~~~~~~l~g~~~~~~  326 (361)
                      + .+  +.+.+     +++|++|| +|+ ..+..++++++++ |+++.+|..... ...++... +.+++++.|++.+.+
T Consensus       179 ~~~~--~~~~~-----~~~d~vid-~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~  247 (302)
T 1iz0_A          179 EVPE--RAKAW-----GGLDLVLE-VRG-KEVEESLGLLAHG-GRLVYIGAAEGE-VAPIPPLRLMRRNLAVLGFWLTPL  247 (302)
T ss_dssp             GHHH--HHHHT-----TSEEEEEE-CSC-TTHHHHHTTEEEE-EEEEEC--------CCCCTTHHHHTTCEEEECCHHHH
T ss_pred             cchh--HHHHh-----cCceEEEE-CCH-HHHHHHHHhhccC-CEEEEEeCCCCC-CCCcCHHHHHhCCCeEEEEeccch
Confidence            4 22  33333     57999999 998 7889999999998 999999976532 11233333 349999999876532


Q ss_pred             -CcCCcHHHHHH---HHHcCCcc
Q 018072          327 -KPRTDLPSVVD---MYMNKVIR  345 (361)
Q Consensus       327 -~~~~~~~~~~~---~~~~~~l~  345 (361)
                       ...++++++++   ++++|+++
T Consensus       248 ~~~~~~~~~~~~~~~l~~~g~l~  270 (302)
T 1iz0_A          248 LREGALVEEALGFLLPRLGRELR  270 (302)
T ss_dssp             TTCHHHHHHHHHHHGGGBTTTBC
T ss_pred             hhhHHHHHHHHhhhHHHHcCCcc
Confidence             12467899999   99999884

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=100.00  E-value=1.3e-39  Score=306.03  Aligned_cols=278  Identities=17%  Similarity=0.214  Sum_probs=228.4

Q ss_pred             cccceeEEEeecC--C----CCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeC
Q 018072            7 LILTCKAAVAWEA--G----KPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVG   80 (361)
Q Consensus         7 ~~~~m~a~~~~~~--~----~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G   80 (361)
                      .+++|||+++.+.  |    +.++++++|.|+|+++||||||.++|||+.|... .   ...++|.++|||++|+|++. 
T Consensus         4 ~~~~mka~~~~~~~~g~~~~~~l~~~e~~~P~~~~~eVlVkv~a~gi~~~~~~~-~---~~~~~p~~~g~e~~G~Vv~~-   78 (333)
T 1v3u_A            4 FMVKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIA-S---KRLKEGAVMMGQQVARVVES-   78 (333)
T ss_dssp             CCCEEEEEEECC-----CCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHH-T---TTCCTTSBCCCCEEEEEEEE-
T ss_pred             ccccccEEEEeecCCCCCCccceEEEeCCCCCCCCCEEEEEEEEeccCHHHccc-c---CcCCCCcccccceEEEEEec-
Confidence            4678999999884  3    2389999999999999999999999999988732 1   12356889999999999995 


Q ss_pred             CCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccc
Q 018072           81 EGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGC  160 (361)
Q Consensus        81 ~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~  160 (361)
                       ++++|++||||++.                                                    |+|+||+++|.+.
T Consensus        79 -~v~~~~vGdrV~~~----------------------------------------------------g~~aey~~v~~~~  105 (333)
T 1v3u_A           79 -KNSAFPAGSIVLAQ----------------------------------------------------SGWTTHFISDGKG  105 (333)
T ss_dssp             -SCTTSCTTCEEEEC----------------------------------------------------CCSBSEEEESSTT
T ss_pred             -CCCCCCCCCEEEec----------------------------------------------------CceEEEEEechHH
Confidence             57889999999842                                                    3799999999999


Q ss_pred             eEECCCC----CChhh-hhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 018072          161 VAKINPL----APLDK-VCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE  234 (361)
Q Consensus       161 ~~~iP~~----~~~~~-aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~  234 (361)
                      ++++|++    +++++ +|++++++.|||+++.+.+++++|++|||+|+ |++|++++|+++..|+ +|+++++++++++
T Consensus       106 ~~~iP~~~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~  184 (333)
T 1v3u_A          106 LEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIA  184 (333)
T ss_dssp             EEECC--CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHH
T ss_pred             eEEcCcccccCCCHHHHHHHhCChHHHHHHHHHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHH
Confidence            9999997    88887 58888899999999878899999999999998 9999999999999999 9999999999999


Q ss_pred             HHHHcCCCEEEcCCC-CCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCc----ee-ecC
Q 018072          235 EAKKFGVTDFVNTSE-HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDA----VF-MTK  308 (361)
Q Consensus       235 ~~~~~G~~~vv~~~~-~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~----~~-~~~  308 (361)
                      .++++|++.++|+.+ .+  +.+.+.+.+++++|++||++|. ..+..++++++++ |+++.+|......    .. ..+
T Consensus       185 ~~~~~g~~~~~d~~~~~~--~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~  260 (333)
T 1v3u_A          185 YLKQIGFDAAFNYKTVNS--LEEALKKASPDGYDCYFDNVGG-EFLNTVLSQMKDF-GKIAICGAISVYNRMDQLPPGPS  260 (333)
T ss_dssp             HHHHTTCSEEEETTSCSC--HHHHHHHHCTTCEEEEEESSCH-HHHHHHHTTEEEE-EEEEECCCCC-------CCBCCC
T ss_pred             HHHhcCCcEEEecCCHHH--HHHHHHHHhCCCCeEEEECCCh-HHHHHHHHHHhcC-CEEEEEeccccccCCCCCCCCcC
Confidence            999999999998876 44  7778887776689999999998 6789999999997 9999999765311    11 112


Q ss_pred             hhhh-ccccEEEEeeecCCC---cCCcHHHHHHHHHcCCcccC
Q 018072          309 PINV-LNERTLKGTFFGNYK---PRTDLPSVVDMYMNKVIRFS  347 (361)
Q Consensus       309 ~~~~-~~~~~l~g~~~~~~~---~~~~~~~~~~~~~~~~l~~~  347 (361)
                      ...+ ++++++.|++.+.+.   .+++++++++++++|++++.
T Consensus       261 ~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~  303 (333)
T 1v3u_A          261 PESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVLEGKIQYH  303 (333)
T ss_dssp             HHHHHHTTCEEEECCGGGCCTHHHHHHHHHHHHHHHTTSSCCC
T ss_pred             HHHHhhcCceEEEEehhhcchHHHHHHHHHHHHHHHCCCccCc
Confidence            3333 499999998765532   13567889999999998653

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=1.4e-38  Score=300.43  Aligned_cols=280  Identities=20%  Similarity=0.206  Sum_probs=223.5

Q ss_pred             ccceeEEEeec-----CCC-CeEEE--EeecCC-CCCCeEEEEEeEEecCccchhccccCCCC----CCCCcccccceeE
Q 018072            8 ILTCKAAVAWE-----AGK-PLIIQ--DVEVAP-PQAMEVRIKIKYTSLCRTDLYFWESKGQT----PLFPRIFGHEAAG   74 (361)
Q Consensus         8 ~~~m~a~~~~~-----~~~-~~~~~--~~~~p~-~~~~evlVkv~~~~i~~~D~~~~~g~~~~----~~~p~~~G~e~~G   74 (361)
                      |.+||++++..     ++. .++++  ++|.|. |+++||||||.++|+|+.|. .+.|....    ..+|+++|||++|
T Consensus         2 ~~~mka~~m~a~~~~~p~~~~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~-~~~g~~~~~~~~~~~p~v~G~e~~G   80 (345)
T 2j3h_A            2 TATNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMR-IRMGKPDPSTAALAQAYTPGQPIQG   80 (345)
T ss_dssp             EEEEEEEEECSCBSSSCCGGGEEEEEEEEECCSCSSSSCEEEEECEEECCTTHH-HHHBC---------CCCCTTSBCEE
T ss_pred             CccceEEEEecCCCCCCCccceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHH-hhcccCCCCccccCCCcCCCCeeec
Confidence            45677777654     442 38888  889887 89999999999999888774 44454322    2468999999999


Q ss_pred             EEEE--eCCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCccccee
Q 018072           75 VVES--VGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSE  152 (361)
Q Consensus        75 ~V~~--~G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae  152 (361)
                      ++++  +|+++++|++||||+..                                                    |+|+|
T Consensus        81 ~~~~GvV~~~v~~~~vGdrV~~~----------------------------------------------------g~~ae  108 (345)
T 2j3h_A           81 YGVSRIIESGHPDYKKGDLLWGI----------------------------------------------------VAWEE  108 (345)
T ss_dssp             EEEEEEEEECSTTCCTTCEEEEE----------------------------------------------------EESBS
T ss_pred             ceEEEEEecCCCCCCCCCEEEee----------------------------------------------------cCcee
Confidence            9999  99999999999999842                                                    38999


Q ss_pred             eEEEeccc--eEECCC---CCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEE
Q 018072          153 YTVVHSGC--VAKINP---LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV  226 (361)
Q Consensus       153 ~v~v~~~~--~~~iP~---~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~  226 (361)
                      |++++++.  ++++|+   +++++ +|++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++
T Consensus       109 y~~v~~~~~~~~~ip~~~~~~~~~-aa~l~~~~~ta~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~-~V~~~  186 (345)
T 2j3h_A          109 YSVITPMTHAHFKIQHTDVPLSYY-TGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGC-YVVGS  186 (345)
T ss_dssp             EEEECCCTTTCEEECCCSSCTTGG-GTTTSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEE
T ss_pred             EEEecccccceeecCCCCCCHHHH-HHhccccHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEE
Confidence            99999876  999996   35555 67788899999999878899999999999997 9999999999999999 89999


Q ss_pred             cCChhhHHHHH-HcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCC---
Q 018072          227 DRSSKRFEEAK-KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD---  302 (361)
Q Consensus       227 ~~~~~~~~~~~-~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~---  302 (361)
                      ++++++++.++ ++|++.++++.+.+ ++.+.++..+++++|++||++|+ ..+..++++++++ |+++.+|.....   
T Consensus       187 ~~~~~~~~~~~~~~g~~~~~d~~~~~-~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-G~~v~~G~~~~~~~~  263 (345)
T 2j3h_A          187 AGSKEKVDLLKTKFGFDDAFNYKEES-DLTAALKRCFPNGIDIYFENVGG-KMLDAVLVNMNMH-GRIAVCGMISQYNLE  263 (345)
T ss_dssp             ESSHHHHHHHHHTSCCSEEEETTSCS-CSHHHHHHHCTTCEEEEEESSCH-HHHHHHHTTEEEE-EEEEECCCGGGTTCS
T ss_pred             eCCHHHHHHHHHHcCCceEEecCCHH-HHHHHHHHHhCCCCcEEEECCCH-HHHHHHHHHHhcC-CEEEEEccccccccC
Confidence            99999999998 79999999876542 26677777765589999999998 7889999999997 999999875421   


Q ss_pred             -ceeecChhh-hccccEEEEeeecCCC--cCCcHHHHHHHHHcCCcc
Q 018072          303 -AVFMTKPIN-VLNERTLKGTFFGNYK--PRTDLPSVVDMYMNKVIR  345 (361)
Q Consensus       303 -~~~~~~~~~-~~~~~~l~g~~~~~~~--~~~~~~~~~~~~~~~~l~  345 (361)
                       ....++... +++++++.|++.+.+.  ..+.++++++++++|+++
T Consensus       264 ~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~i~  310 (345)
T 2j3h_A          264 NQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLPHIREGKIT  310 (345)
T ss_dssp             SCCCBSCTTHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSC
T ss_pred             CccccccHHHHhhhceeeceeeehhhhhhHHHHHHHHHHHHHCCCCc
Confidence             122233333 3499999998765431  123488999999999985

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=6.8e-39  Score=331.16  Aligned_cols=273  Identities=20%  Similarity=0.232  Sum_probs=228.2

Q ss_pred             eEEEeecCCCC--eEEEEeec--CCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 018072           12 KAAVAWEAGKP--LIIQDVEV--APPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLE   87 (361)
Q Consensus        12 ~a~~~~~~~~~--~~~~~~~~--p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~   87 (361)
                      ..+.+..+|.+  +++++.|.  |+|+++||+|||.++|||++|++++.|.++   .|.++|||++|+|+++|++|++|+
T Consensus       211 ~~l~~~~~G~~~~L~~~~~~~p~~~~~~~eVlV~V~a~gin~~D~~~~~G~~~---~~~~lG~E~aG~V~~vG~~V~~~~  287 (795)
T 3slk_A          211 WRLEATRPGSLDGLALVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYP---GVASLGSEGAGVVVETGPGVTGLA  287 (795)
T ss_dssp             CCEEESSTTSSTTEEECCCHHHHSCCCSSEEEEEEEEEEECHHHHHHTTTCCS---SCCCSCCCEEEEEEEECSSCCSSC
T ss_pred             EEEecCCCCCccceEEEeCCccCCCCCCCEEEEEEEEEccCHHHHHHHcCCCC---CCccccceeEEEEEEeCCCCCcCC
Confidence            34555566654  88887775  568999999999999999999999988654   356799999999999999999999


Q ss_pred             CCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072           88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  167 (361)
Q Consensus        88 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~  167 (361)
                      +||||+...                                                  .|+|+||+++|.+.++++|++
T Consensus       288 vGDrV~~~~--------------------------------------------------~G~~ae~~~v~~~~~~~iP~~  317 (795)
T 3slk_A          288 PGDRVMGMI--------------------------------------------------PKAFGPLAVADHRMVTRIPAG  317 (795)
T ss_dssp             TTCEEEECC--------------------------------------------------SSCSSSEEEEETTSEEECCTT
T ss_pred             CCCEEEEEe--------------------------------------------------cCCCcCEEEeehHHEEECCCC
Confidence            999998431                                                  148999999999999999999


Q ss_pred             CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEc
Q 018072          168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  246 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~  246 (361)
                      +++++||++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++ |.+.++ +|++++++
T Consensus       318 ls~~~AA~l~~~~~Ta~~al~~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga-~V~~t~~~~-k~~~l~-lga~~v~~  394 (795)
T 3slk_A          318 WSFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGA-EVYATASED-KWQAVE-LSREHLAS  394 (795)
T ss_dssp             CCHHHHHHHHHHHHHHHCCCCCCTCCCTTCCEEEESTTBHHHHHHHHHHHHTTC-CEEEECCGG-GGGGSC-SCGGGEEC
T ss_pred             CCHHHHHhhhHHHHHHHHHHHHHhCCCCCCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeChH-Hhhhhh-cChhheee
Confidence            9999999999999999999888999999999999997 9999999999999999 899997665 666655 99999999


Q ss_pred             CCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecC
Q 018072          247 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN  325 (361)
Q Consensus       247 ~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~  325 (361)
                      +.+.+  +.+.+++.+++ |+|+|||++|+ +.+..++++++++ |+++.+|.........+  ....+++++.+.....
T Consensus       395 ~~~~~--~~~~i~~~t~g~GvDvVld~~gg-~~~~~~l~~l~~~-Gr~v~iG~~~~~~~~~~--~~~~~~~~~~~~~l~~  468 (795)
T 3slk_A          395 SRTCD--FEQQFLGATGGRGVDVVLNSLAG-EFADASLRMLPRG-GRFLELGKTDVRDPVEV--ADAHPGVSYQAFDTVE  468 (795)
T ss_dssp             SSSST--HHHHHHHHSCSSCCSEEEECCCT-TTTHHHHTSCTTC-EEEEECCSTTCCCHHHH--HHHSSSEEEEECCGGG
T ss_pred             cCChh--HHHHHHHHcCCCCeEEEEECCCc-HHHHHHHHHhcCC-CEEEEeccccccCcccc--cccCCCCEEEEeeccc
Confidence            88766  89999999988 99999999998 7889999999998 99999997653332222  2223778887765422


Q ss_pred             CC---cCCcHHHHHHHHHcCCccc
Q 018072          326 YK---PRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       326 ~~---~~~~~~~~~~~~~~~~l~~  346 (361)
                      ..   ..+.++++++++++|+++.
T Consensus       469 ~~~~~~~~~l~~~~~l~~~g~l~p  492 (795)
T 3slk_A          469 AGPQRIGEMLHELVELFEGRVLEP  492 (795)
T ss_dssp             GHHHHHHHHHHHHHHHHHTTSCCC
T ss_pred             cCHHHHHHHHHHHHHHHHcCCcCC
Confidence            11   1356788999999998854

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.96  E-value=1e-28  Score=279.52  Aligned_cols=253  Identities=16%  Similarity=0.173  Sum_probs=204.5

Q ss_pred             eEEEEeecCC-CC--CCeEEEEEeEEecCccchhccccCCCCC-------CCCcccccceeEEEEEeCCCCCCCCCCCEE
Q 018072           23 LIIQDVEVAP-PQ--AMEVRIKIKYTSLCRTDLYFWESKGQTP-------LFPRIFGHEAAGVVESVGEGVSDLEVGDHV   92 (361)
Q Consensus        23 ~~~~~~~~p~-~~--~~evlVkv~~~~i~~~D~~~~~g~~~~~-------~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V   92 (361)
                      +.+.+.+... +.  ++||+|||.++|+|+.|++++.|..+..       ..|.++|+|++|+|.          +||+|
T Consensus      1544 l~~~~~~~~~~~~l~~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~V~----------vGdrV 1613 (2512)
T 2vz8_A         1544 IRWVCSPLHYALPASCQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRDA----------SGRRV 1613 (2512)
T ss_dssp             EEEEECTTTTCCCHHHHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEEET----------TSCCE
T ss_pred             eEEEecCcccccCCCCCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEEEEc----------cCCEE
Confidence            6666655433 32  7899999999999999999988865422       245789999999883          79999


Q ss_pred             eecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCChhh
Q 018072           93 LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK  172 (361)
Q Consensus        93 ~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~~~~  172 (361)
                      +...                               .                  .|+|+||+++|++.++++|+++++++
T Consensus      1614 ~g~~-------------------------------~------------------~G~~Aeyv~vp~~~v~~iPd~ls~~e 1644 (2512)
T 2vz8_A         1614 MGMV-------------------------------P------------------AEGLATSVLLLQHATWEVPSTWTLEE 1644 (2512)
T ss_dssp             EEEC-------------------------------S------------------SCCSBSEEECCGGGEEECCTTSCHHH
T ss_pred             EEee-------------------------------c------------------CCceeeEEEcccceEEEeCCCCCHHH
Confidence            8431                               1                  14899999999999999999999999


Q ss_pred             hhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcC
Q 018072          173 VCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNT  247 (361)
Q Consensus       173 aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~  247 (361)
                      ||++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|++++++++|++++++    +|+++++++
T Consensus      1645 AA~lp~~~~TA~~al~~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga-~Viat~~s~~k~~~l~~~~~~lga~~v~~~ 1723 (2512)
T 2vz8_A         1645 AASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGC-RVFTTVGSAEKRAYLQARFPQLDETCFANS 1723 (2512)
T ss_dssp             HTTSHHHHHHHHHHHTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTCCSTTEEES
T ss_pred             HHHhHHHHHHHHHHHHHHhcCCCCCEEEEEeCChHHHHHHHHHHHHcCC-EEEEEeCChhhhHHHHhhcCCCCceEEecC
Confidence            99999999999999888899999999999986 9999999999999999 89999999999999986    788999988


Q ss_pred             CCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCC
Q 018072          248 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY  326 (361)
Q Consensus       248 ~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~  326 (361)
                      .+.+  +.+.++..+++ |+|+|||++++ +.+..++++++++ |+++.+|..............+.+++++.|+.....
T Consensus      1724 ~~~~--~~~~i~~~t~g~GvDvVld~~g~-~~l~~~l~~L~~~-Gr~V~iG~~~~~~~~~~~~~~~~~~~~~~g~~l~~~ 1799 (2512)
T 2vz8_A         1724 RDTS--FEQHVLRHTAGKGVDLVLNSLAE-EKLQASVRCLAQH-GRFLEIGKFDLSNNHALGMAVFLKNVTFHGILLDSL 1799 (2512)
T ss_dssp             SSSH--HHHHHHHTTTSCCEEEEEECCCH-HHHHHHHTTEEEE-EEEEECCCHHHHTTCEEEGGGGGGCCEEEECCGGGT
T ss_pred             CCHH--HHHHHHHhcCCCCceEEEECCCc-hHHHHHHHhcCCC-cEEEEeecccccccCcccccccccCCcEEEeeHHHH
Confidence            7655  88888888887 99999999975 8899999999997 999999864311112222233458999999876442


Q ss_pred             C--cCCcHHHHHHHH
Q 018072          327 K--PRTDLPSVVDMY  339 (361)
Q Consensus       327 ~--~~~~~~~~~~~~  339 (361)
                      .  .+++++++++++
T Consensus      1800 ~~~~~~~~~~~l~~l 1814 (2512)
T 2vz8_A         1800 FEEGGATWQEVSELL 1814 (2512)
T ss_dssp             TSSCCHHHHHHHHHH
T ss_pred             hhhCHHHHHHHHHHH
Confidence            1  233455555554

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.90  E-value=2.9e-23  Score=180.03  Aligned_cols=183  Identities=19%  Similarity=0.245  Sum_probs=140.9

Q ss_pred             cceEECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 018072          159 GCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK  237 (361)
Q Consensus       159 ~~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~  237 (361)
                      +.++++|+++++++||++++++.|||+++.+..++++|++|||+|+ |++|++++|+++..|+ +|+++++++++.+.++
T Consensus         2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~   80 (198)
T 1pqw_A            2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLS   80 (198)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHH
T ss_pred             CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence            5688999999999999999999999999877889999999999996 9999999999999998 8999999999999999


Q ss_pred             HcCCCEEEcCCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCC--CceeecChhhhcc
Q 018072          238 KFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK--DAVFMTKPINVLN  314 (361)
Q Consensus       238 ~~G~~~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~--~~~~~~~~~~~~~  314 (361)
                      ++|++.+++..+.+  +.+.+.+.+.+ ++|++||++|. ..++.++++|+++ |+++.+|....  ...+++  ..+.+
T Consensus        81 ~~g~~~~~d~~~~~--~~~~~~~~~~~~~~D~vi~~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~--~~~~~  154 (198)
T 1pqw_A           81 RLGVEYVGDSRSVD--FADEILELTDGYGVDVVLNSLAG-EAIQRGVQILAPG-GRFIELGKKDVYADASLGL--AALAK  154 (198)
T ss_dssp             TTCCSEEEETTCST--HHHHHHHHTTTCCEEEEEECCCT-HHHHHHHHTEEEE-EEEEECSCGGGTTTCEEEG--GGGTT
T ss_pred             HcCCCEEeeCCcHH--HHHHHHHHhCCCCCeEEEECCch-HHHHHHHHHhccC-CEEEEEcCCCCcCcCcCCh--hHhcC
Confidence            99999888877654  67777777765 89999999986 7889999999997 99999997542  223333  23348


Q ss_pred             ccEEEEeee------cCCCcCCcHHHHHHHHHcCCcccCC
Q 018072          315 ERTLKGTFF------GNYKPRTDLPSVVDMYMNKVIRFSS  348 (361)
Q Consensus       315 ~~~l~g~~~------~~~~~~~~~~~~~~~~~~~~l~~~~  348 (361)
                      ++++.++..      +.....+.++++++++++|++++..
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~  194 (198)
T 1pqw_A          155 SASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEVLP  194 (198)
T ss_dssp             TCEEEECCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCCC
T ss_pred             CcEEEEEehHHhhccCHHHHHHHHHHHHHHHHcCCccCCC
Confidence            899887543      1111145789999999999998754

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=99.26  E-value=1.7e-11  Score=109.00  Aligned_cols=168  Identities=10%  Similarity=0.054  Sum_probs=111.6

Q ss_pred             CCCCCEEeecC-------CCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEec
Q 018072           86 LEVGDHVLPVF-------TGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHS  158 (361)
Q Consensus        86 ~~~Gd~V~~~~-------~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~  158 (361)
                      +++||+|++.+       ...|+.|..|+.|..+.|......                          .|+..+      
T Consensus         4 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~G~~~~~~~~g~~--------------------------~G~~~~------   51 (248)
T 2yvl_A            4 FKEGEYVLIRFGEKKFLRKLLPKQSLSVKKSVLKFDEVIGKP--------------------------EGVKIN------   51 (248)
T ss_dssp             CCTTCEEEEEETTEEEEEECCTTCEEEETTEEEEGGGTTTCC--------------------------TTEEET------
T ss_pred             CCCCCEEEEEeCCeEEEEEEcCCCEEecCCceEEHHHhcCCC--------------------------CCCEEE------
Confidence            89999999998       778999999999999888743111                          012222      


Q ss_pred             cceEECCCCCChhhhhcc-----ccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhH
Q 018072          159 GCVAKINPLAPLDKVCIL-----SCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRF  233 (361)
Q Consensus       159 ~~~~~iP~~~~~~~aa~l-----~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~  233 (361)
                      ..+++.|+.....+.+..     ..+...+  .+.....++++++||.+|+| .|..+..+++. +. +|+++|.+++.+
T Consensus        52 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~vldiG~G-~G~~~~~l~~~-~~-~v~~vD~~~~~~  126 (248)
T 2yvl_A           52 GFEVYRPTLEEIILLGFERKTQIIYPKDSF--YIALKLNLNKEKRVLEFGTG-SGALLAVLSEV-AG-EVWTFEAVEEFY  126 (248)
T ss_dssp             TEEEECCCHHHHHHHTSCCSSCCCCHHHHH--HHHHHTTCCTTCEEEEECCT-TSHHHHHHHHH-SS-EEEEECSCHHHH
T ss_pred             EEEEeCCCHHHHHHhcCcCCCCcccchhHH--HHHHhcCCCCCCEEEEeCCC-ccHHHHHHHHh-CC-EEEEEecCHHHH
Confidence            333444432222211111     1022222  23466788999999999998 59999999988 65 999999999998


Q ss_pred             HHHHHc----CC-CEE-EcCCCCCccHHHHHHHH-cCCCccEEEEccCCh-HHHHHHHHHhcCCCcEEEEEcC
Q 018072          234 EEAKKF----GV-TDF-VNTSEHDRPIQEVIAEM-TNGGVDRSVECTGNI-DNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       234 ~~~~~~----G~-~~v-v~~~~~~~~~~~~i~~~-~~~g~Dvvid~~g~~-~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      +.+++.    +. ..+ +...+..    +   .. .++++|+|+...+.+ ..++.+.+.|+++ |++++...
T Consensus       127 ~~a~~~~~~~~~~~~~~~~~~d~~----~---~~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  191 (248)
T 2yvl_A          127 KTAQKNLKKFNLGKNVKFFNVDFK----D---AEVPEGIFHAAFVDVREPWHYLEKVHKSLMEG-APVGFLLP  191 (248)
T ss_dssp             HHHHHHHHHTTCCTTEEEECSCTT----T---SCCCTTCBSEEEECSSCGGGGHHHHHHHBCTT-CEEEEEES
T ss_pred             HHHHHHHHHcCCCCcEEEEEcChh----h---cccCCCcccEEEECCcCHHHHHHHHHHHcCCC-CEEEEEeC
Confidence            888763    43 111 1111111    0   01 123799999988876 7889999999998 99988754

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=98.91  E-value=1.2e-11  Score=118.24  Aligned_cols=182  Identities=17%  Similarity=0.152  Sum_probs=129.0

Q ss_pred             ccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccC
Q 018072           67 IFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLG  146 (361)
Q Consensus        67 ~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~  146 (361)
                      ..|++.++.|.++|++++++.+|+.+++.....                        ++.                ....
T Consensus        76 ~~g~~a~~~i~~v~~Glds~~vGe~~Il~qvk~------------------------~~~----------------~~~~  115 (404)
T 1gpj_A           76 KRGSEAVRHLFRVASGLESMMVGEQEILRQVKK------------------------AYD----------------RAAR  115 (404)
T ss_dssp             EEHHHHHHHHHHHHTTTTSSSTTCHHHHHHHHH------------------------HHH----------------HHHH
T ss_pred             ecCchHhhhheeeccCCCCCcCCcchhHHHHHH------------------------HHH----------------HHHH
Confidence            578999999999999999999999874311000                        000                0001


Q ss_pred             cccceeeEEEeccceEECCCCCChhhhhccccchhhhhhhhhhhc---CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeE
Q 018072          147 TSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA---KPERGSSVAVFGLGAVGLAAAEGARIAGASRI  223 (361)
Q Consensus       147 ~G~~ae~v~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~---~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~V  223 (361)
                      .|++++|+..+...++++|+.++.+.++.. .+..++|+++....   +-.+|++|+|+|+|++|.++++.++..|+.+|
T Consensus       116 ~G~~~~~~~~~~~~a~~~~k~v~~~~~~~~-~~~s~a~~av~~a~~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V  194 (404)
T 1gpj_A          116 LGTLDEALKIVFRRAINLGKRAREETRISE-GAVSIGSAAVELAERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAV  194 (404)
T ss_dssp             HTCCCHHHHHHHHHHHHHHHHHHHHSSTTC-SCCSHHHHHHHHHHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEE
T ss_pred             cCCchHHHHHHHHHHhhhhccCcchhhhcC-CCccHHHHHHHHHHHHhccccCCEEEEEChHHHHHHHHHHHHHCCCCEE
Confidence            236788888888888999988877776653 36778887753221   12589999999999999999999999998899


Q ss_pred             EEEcCChhhH-HHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHH--HHHHH--h--cCCCcEEEEE
Q 018072          224 IGVDRSSKRF-EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMI--SAFEC--V--HDGWGVAVLV  296 (361)
Q Consensus       224 i~~~~~~~~~-~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~--~~~~~--l--~~~~G~iv~~  296 (361)
                      ++++++.++. ++++++|++ ++++.    ++.+.+     .++|+|+++++.+..+.  ..++.  +  +++ +.++++
T Consensus       195 ~v~~r~~~ra~~la~~~g~~-~~~~~----~l~~~l-----~~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~-~~~v~v  263 (404)
T 1gpj_A          195 LVANRTYERAVELARDLGGE-AVRFD----ELVDHL-----ARSDVVVSATAAPHPVIHVDDVREALRKRDRR-SPILII  263 (404)
T ss_dssp             EEECSSHHHHHHHHHHHTCE-ECCGG----GHHHHH-----HTCSEEEECCSSSSCCBCHHHHHHHHHHCSSC-CCEEEE
T ss_pred             EEEeCCHHHHHHHHHHcCCc-eecHH----hHHHHh-----cCCCEEEEccCCCCceecHHHHHHHHHhccCC-CCEEEE
Confidence            9999999886 677888875 33221    133332     26899999998755432  44555  4  555 777777


Q ss_pred             cCCC
Q 018072          297 GVPS  300 (361)
Q Consensus       297 g~~~  300 (361)
                      +...
T Consensus       264 dia~  267 (404)
T 1gpj_A          264 DIAN  267 (404)
T ss_dssp             ECCS
T ss_pred             EccC
Confidence            7654

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.89  E-value=1e-09  Score=103.35  Aligned_cols=142  Identities=19%  Similarity=0.113  Sum_probs=97.7

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCE--EEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--FVNTSEHDRPIQEVIAEMTNGGVDRSVECT  273 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~--vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~  273 (361)
                      +++|+|+|+|++|+++++.++.+|+ +|++++++++|++.+++++...  +++....  ++.+.+.     ++|+||+++
T Consensus       167 ~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~-----~~DvVI~~~  238 (361)
T 1pjc_A          167 PGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSNSA--EIETAVA-----EADLLIGAV  238 (361)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECCHH--HHHHHHH-----TCSEEEECC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCceeEeeeCCHH--HHHHHHc-----CCCEEEECC
Confidence            4899999999999999999999999 9999999999999998876543  3332211  1333221     689999999


Q ss_pred             CChHH------HHHHHHHhcCCCcEEEEEcCCCCCc-----eeecChhhh-ccccEEEEeeecCCC---------cCCcH
Q 018072          274 GNIDN------MISAFECVHDGWGVAVLVGVPSKDA-----VFMTKPINV-LNERTLKGTFFGNYK---------PRTDL  332 (361)
Q Consensus       274 g~~~~------~~~~~~~l~~~~G~iv~~g~~~~~~-----~~~~~~~~~-~~~~~l~g~~~~~~~---------~~~~~  332 (361)
                      +.+..      .+..++.++++ |+++.++...+..     ...++...+ .+++++.+...-...         ....+
T Consensus       239 ~~~~~~~~~li~~~~~~~~~~g-~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~~~~~lp~~~~~~~s~~~~~~~~  317 (361)
T 1pjc_A          239 LVPGRRAPILVPASLVEQMRTG-SVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPNMPGAVPWTATQALNNSTL  317 (361)
T ss_dssp             CCTTSSCCCCBCHHHHTTSCTT-CEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEECCSCGGGGCHHHHHHHHHHHHH
T ss_pred             CcCCCCCCeecCHHHHhhCCCC-CEEEEEecCCCCCCccccCCCCCCCEEEECCEEEEEeCCcchhhHHHHHHHHHHHHH
Confidence            87542      56778899997 9999998755321     112222223 388888775421110         12345


Q ss_pred             HHHHHHHHcCCcccC
Q 018072          333 PSVVDMYMNKVIRFS  347 (361)
Q Consensus       333 ~~~~~~~~~~~l~~~  347 (361)
                      +.+++++.+|. ...
T Consensus       318 ~~l~~l~~~G~-~~~  331 (361)
T 1pjc_A          318 PYVVKLANQGL-KAL  331 (361)
T ss_dssp             HHHHHHHHHGG-GGG
T ss_pred             HHHHHHHhCCc-ccc
Confidence            77888888774 443

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.77  E-value=1.5e-08  Score=96.21  Aligned_cols=144  Identities=16%  Similarity=0.215  Sum_probs=96.2

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEE-EcCCCC---------------C--ccHHH
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEH---------------D--RPIQE  256 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~v-v~~~~~---------------~--~~~~~  256 (361)
                      +|++|+|+|+|.+|+++++.|+.+|+ +|+++++++++++.++++|++.+ ++..+.               +  ....+
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~  249 (384)
T 1l7d_A          171 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  249 (384)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence            68999999999999999999999999 79999999999999999998754 222110               0  00112


Q ss_pred             HHHHHcCCCccEEEEcc---CChH--HH-HHHHHHhcCCCcEEEEEcCCCC-CceeecChhhh-ccccEEEEeeecCCCc
Q 018072          257 VIAEMTNGGVDRSVECT---GNID--NM-ISAFECVHDGWGVAVLVGVPSK-DAVFMTKPINV-LNERTLKGTFFGNYKP  328 (361)
Q Consensus       257 ~i~~~~~~g~Dvvid~~---g~~~--~~-~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~~~-~~~~~l~g~~~~~~~~  328 (361)
                      .+.+... ++|+||+++   |.+.  .+ ...++.|+++ +.++.++...+ ......+...+ .+++++.|+...    
T Consensus       250 ~l~~~~~-~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g-~vivdva~~~gg~~~~~~~~~~~~~~~v~i~g~~~~----  323 (384)
T 1l7d_A          250 AVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPG-SVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTNV----  323 (384)
T ss_dssp             HHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTT-CEEEETTGGGTCSSTTCCTTCEEEETTEEEECCSSG----
T ss_pred             HHHHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCC-CEEEEEecCCCCCeecccCCcEEEECCEEEEEeCCC----
Confidence            2333333 699999999   5322  23 6788999997 99999986432 21111121223 388999886532    


Q ss_pred             CCc-HHHHHHHHHcCCcc
Q 018072          329 RTD-LPSVVDMYMNKVIR  345 (361)
Q Consensus       329 ~~~-~~~~~~~~~~~~l~  345 (361)
                      +.. .+.+.+++.++.++
T Consensus       324 p~~~~~~a~~l~~~~~~~  341 (384)
T 1l7d_A          324 PSRVAADASPLFAKNLLN  341 (384)
T ss_dssp             GGGGHHHHHHHHHHHHHH
T ss_pred             cchhHHHHHHHHHHhHHH
Confidence            233 45577777666553

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.65  E-value=5e-08  Score=92.08  Aligned_cols=141  Identities=20%  Similarity=0.163  Sum_probs=89.7

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  273 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~  273 (361)
                      ++++|+|+|+|++|+.+++.++.+|+ +|+++++++++++.+++ +|.....+..+.+ ++.+.+.     ++|+|++++
T Consensus       165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~-~l~~~~~-----~~DvVi~~~  237 (369)
T 2eez_A          165 APASVVILGGGTVGTNAAKIALGMGA-QVTILDVNHKRLQYLDDVFGGRVITLTATEA-NIKKSVQ-----HADLLIGAV  237 (369)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSEEEEECCHH-HHHHHHH-----HCSEEEECC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCceEEEecCCHH-HHHHHHh-----CCCEEEECC
Confidence            45899999999999999999999999 99999999999888876 7776433332211 1333321     589999999


Q ss_pred             CChHH------HHHHHHHhcCCCcEEEEEcCCCCCc-----eeecChhhh-ccccEEEEeeecCC---------CcCCcH
Q 018072          274 GNIDN------MISAFECVHDGWGVAVLVGVPSKDA-----VFMTKPINV-LNERTLKGTFFGNY---------KPRTDL  332 (361)
Q Consensus       274 g~~~~------~~~~~~~l~~~~G~iv~~g~~~~~~-----~~~~~~~~~-~~~~~l~g~~~~~~---------~~~~~~  332 (361)
                      +.+..      ....++.|+++ |+++.++...+..     ..+++...+ .+++++.+......         .+...+
T Consensus       238 g~~~~~~~~li~~~~l~~mk~g-g~iV~v~~~~gg~~d~~ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~as~~~~~~~~  316 (369)
T 2eez_A          238 LVPGAKAPKLVTRDMLSLMKEG-AVIVDVAVDQGGCVETIRPTTHAEPTYVVDGVVHYGVANMPGAVPRTSTFALTNQTL  316 (369)
T ss_dssp             C-------CCSCHHHHTTSCTT-CEEEECC-------------------CEETTEEEECCSCSGGGSHHHHHHHHHHHHH
T ss_pred             CCCccccchhHHHHHHHhhcCC-CEEEEEecCCCCCCCcccCCCCCCCEEEECCEEEEeeCCcchhcHHHHHHHHHHHHH
Confidence            87542      56788899997 9999998765321     111221122 37888776541110         013445


Q ss_pred             HHHHHHHHcCC
Q 018072          333 PSVVDMYMNKV  343 (361)
Q Consensus       333 ~~~~~~~~~~~  343 (361)
                      +.+++++.++.
T Consensus       317 ~~l~~l~~~g~  327 (369)
T 2eez_A          317 PYVLKLAEKGL  327 (369)
T ss_dssp             HHHHHHHHHTT
T ss_pred             HHHHHHHhcCh
Confidence            67777777664

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.61  E-value=5.5e-08  Score=92.66  Aligned_cols=143  Identities=20%  Similarity=0.205  Sum_probs=92.6

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEE-cCCC----C-------CccH----HHHH
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV-NTSE----H-------DRPI----QEVI  258 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv-~~~~----~-------~~~~----~~~i  258 (361)
                      +|++|+|+|+|.+|+.++++|+.+|+ +|+++++++++++.++++|++.+. +..+    .       +.++    .+.+
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l  249 (401)
T 1x13_A          171 PPAKVMVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELF  249 (401)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHH
Confidence            58999999999999999999999999 899999999999999999986532 1100    0       0001    1123


Q ss_pred             HHHcCCCccEEEEccCCh-----HHH-HHHHHHhcCCCcEEEEEcCCCC-CceeecChh--hhccccEEEEeeecCCCcC
Q 018072          259 AEMTNGGVDRSVECTGNI-----DNM-ISAFECVHDGWGVAVLVGVPSK-DAVFMTKPI--NVLNERTLKGTFFGNYKPR  329 (361)
Q Consensus       259 ~~~~~~g~Dvvid~~g~~-----~~~-~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~~--~~~~~~~l~g~~~~~~~~~  329 (361)
                      .+... ++|+||++++.+     ..+ ...++.|+++ +.++.++...+ ..+......  ...+++++.|+...    +
T Consensus       250 ~e~~~-~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g-~vIVdva~~~Gg~v~~~~~~~p~~~~~gv~i~g~~~~----p  323 (401)
T 1x13_A          250 AAQAK-EVDIIVTTALIPGKPAPKLITREMVDSMKAG-SVIVDLAAQNGGNCEYTVPGEIFTTENGVKVIGYTDL----P  323 (401)
T ss_dssp             HHHHH-HCSEEEECCCCTTSCCCCCBCHHHHHTSCTT-CEEEETTGGGTCSBTTCCTTSEEECTTSCEEECCSCT----G
T ss_pred             HHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCC-cEEEEEcCCCCCCcCcccCCCceEEECCEEEEeeCCC----c
Confidence            23222 689999996332     223 5788999997 99999986432 222221111  22389999876531    2


Q ss_pred             CcHH-HHHHHHHcCCc
Q 018072          330 TDLP-SVVDMYMNKVI  344 (361)
Q Consensus       330 ~~~~-~~~~~~~~~~l  344 (361)
                      ..+. .+.+++.++.+
T Consensus       324 ~~~~~~a~~ll~~~~~  339 (401)
T 1x13_A          324 GRLPTQSSQLYGTNLV  339 (401)
T ss_dssp             GGSHHHHHHHHHHHHH
T ss_pred             ccCHHHHHHHHHHhHH
Confidence            3443 25555554433

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.57  E-value=1.6e-07  Score=88.75  Aligned_cols=120  Identities=15%  Similarity=0.111  Sum_probs=85.0

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  273 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~  273 (361)
                      +|++|+|+|+|.+|+.+++.++.+|+ +|+++++++++++.+++ +|+....+.... .++.+.+     .++|+|++++
T Consensus       167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~-~~l~~~l-----~~aDvVi~~~  239 (377)
T 2vhw_A          167 EPADVVVIGAGTAGYNAARIANGMGA-TVTVLDINIDKLRQLDAEFCGRIHTRYSSA-YELEGAV-----KRADLVIGAV  239 (377)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSSEEEECCH-HHHHHHH-----HHCSEEEECC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhcCCeeEeccCCH-HHHHHHH-----cCCCEEEECC
Confidence            57999999999999999999999999 99999999999988877 787643322221 1133222     1589999999


Q ss_pred             CChHH------HHHHHHHhcCCCcEEEEEcCCCCC-----ceeecChhhh-ccccEEEEee
Q 018072          274 GNIDN------MISAFECVHDGWGVAVLVGVPSKD-----AVFMTKPINV-LNERTLKGTF  322 (361)
Q Consensus       274 g~~~~------~~~~~~~l~~~~G~iv~~g~~~~~-----~~~~~~~~~~-~~~~~l~g~~  322 (361)
                      +.+..      ....++.|+++ |.++.++...+.     ...+++...+ .+++.+.++.
T Consensus       240 ~~p~~~t~~li~~~~l~~mk~g-~~iV~va~~~Ggv~e~~ep~~~~~~~~~~~~v~i~~~p  299 (377)
T 2vhw_A          240 LVPGAKAPKLVSNSLVAHMKPG-AVLVDIAIDQGGCFEGSRPTTYDHPTFAVHDTLFYCVA  299 (377)
T ss_dssp             CCTTSCCCCCBCHHHHTTSCTT-CEEEEGGGGTTCSBTTCCCBCSSSCEEEETTEEEECBT
T ss_pred             CcCCCCCcceecHHHHhcCCCC-cEEEEEecCCCCccccccCCCCCCCEEEECCEEEEecC
Confidence            87553      57788999997 999999854321     1222222222 3788776543

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.46  E-value=4.1e-07  Score=88.41  Aligned_cols=106  Identities=24%  Similarity=0.274  Sum_probs=84.4

Q ss_pred             hhhhhhhhhhhc-CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHH
Q 018072          180 VSTGLGATLNVA-KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVI  258 (361)
Q Consensus       180 ~~ta~~a~~~~~-~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i  258 (361)
                      ..++|+++.+.. ...+|++|+|+|.|.+|..+++.++.+|+ +|+++++++++.+.++++|++ ++     +  +.+.+
T Consensus       257 ~~s~~~g~~r~~~~~l~GktV~IiG~G~IG~~~A~~lka~Ga-~Viv~d~~~~~~~~A~~~Ga~-~~-----~--l~e~l  327 (494)
T 3ce6_A          257 RHSLIDGINRGTDALIGGKKVLICGYGDVGKGCAEAMKGQGA-RVSVTEIDPINALQAMMEGFD-VV-----T--VEEAI  327 (494)
T ss_dssp             HHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-EC-----C--HHHHG
T ss_pred             hhhhhHHHHhccCCCCCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCE-Ee-----c--HHHHH
Confidence            345566532222 26899999999999999999999999999 999999999999999999985 22     1  32221


Q ss_pred             HHHcCCCccEEEEccCChHHHH-HHHHHhcCCCcEEEEEcCCC
Q 018072          259 AEMTNGGVDRSVECTGNIDNMI-SAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       259 ~~~~~~g~Dvvid~~g~~~~~~-~~~~~l~~~~G~iv~~g~~~  300 (361)
                           .++|+|+++++....+. ..++.|+++ |+++.+|...
T Consensus       328 -----~~aDvVi~atgt~~~i~~~~l~~mk~g-gilvnvG~~~  364 (494)
T 3ce6_A          328 -----GDADIVVTATGNKDIIMLEHIKAMKDH-AILGNIGHFD  364 (494)
T ss_dssp             -----GGCSEEEECSSSSCSBCHHHHHHSCTT-CEEEECSSSG
T ss_pred             -----hCCCEEEECCCCHHHHHHHHHHhcCCC-cEEEEeCCCC
Confidence                 26899999999877666 788999997 9999999754

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=98.25  E-value=1.9e-06  Score=77.76  Aligned_cols=105  Identities=19%  Similarity=0.237  Sum_probs=75.1

Q ss_pred             hhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHHc----CCCEEEcCCCCCccHHHHHHHH
Q 018072          187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEM  261 (361)
Q Consensus       187 ~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g-~~~Vi~~~~~~~~~~~~~~~----G~~~vv~~~~~~~~~~~~i~~~  261 (361)
                      +.....++++++||-+|+|. |..+..+++..+ ..+|+++|.+++.++.+++.    |...-+.....+  +.+.   +
T Consensus       104 i~~~~~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d--~~~~---~  177 (277)
T 1o54_A          104 IAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRD--ISEG---F  177 (277)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCC--GGGC---C
T ss_pred             HHHHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECC--HHHc---c
Confidence            34567889999999999987 888889998864 34999999999988887653    541111111222  1111   2


Q ss_pred             cCCCccEEEEccCCh-HHHHHHHHHhcCCCcEEEEEcC
Q 018072          262 TNGGVDRSVECTGNI-DNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       262 ~~~g~Dvvid~~g~~-~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      .++.+|+|+.....+ ..+..+.+.|+++ |++++...
T Consensus       178 ~~~~~D~V~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~  214 (277)
T 1o54_A          178 DEKDVDALFLDVPDPWNYIDKCWEALKGG-GRFATVCP  214 (277)
T ss_dssp             SCCSEEEEEECCSCGGGTHHHHHHHEEEE-EEEEEEES
T ss_pred             cCCccCEEEECCcCHHHHHHHHHHHcCCC-CEEEEEeC
Confidence            234799999887765 6788999999997 99888753

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=98.19  E-value=3.8e-06  Score=79.29  Aligned_cols=124  Identities=17%  Similarity=0.164  Sum_probs=83.0

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcC----CCC--CccHH------------H
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT----SEH--DRPIQ------------E  256 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~----~~~--~~~~~------------~  256 (361)
                      ++.+|+|+|+|.+|+.++++|+.+|+ +|+++|+++++++.++++|++.+...    .+.  ...+.            +
T Consensus       189 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~  267 (405)
T 4dio_A          189 PAAKIFVMGAGVAGLQAIATARRLGA-VVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA  267 (405)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence            67899999999999999999999999 89999999999999999998632210    000  00011            1


Q ss_pred             HHHHHcCCCccEEEEccCChH------HHHHHHHHhcCCCcEEEEEcCCCCCceeecC-h-hhh-ccccEEEEee
Q 018072          257 VIAEMTNGGVDRSVECTGNID------NMISAFECVHDGWGVAVLVGVPSKDAVFMTK-P-INV-LNERTLKGTF  322 (361)
Q Consensus       257 ~i~~~~~~g~Dvvid~~g~~~------~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~-~-~~~-~~~~~l~g~~  322 (361)
                      .+.+.. .+.|+||.++..+.      .-+..++.|+++ +.++.++...+. .+..+ + ..+ .+++++.+..
T Consensus       268 ~l~e~l-~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~G-sVIVDvA~d~GG-~~e~t~~~~~~~~~GV~~~gv~  339 (405)
T 4dio_A          268 LVAEHI-AKQDIVITTALIPGRPAPRLVTREMLDSMKPG-SVVVDLAVERGG-NIEGAEAGKVTEVGGVRIVGHL  339 (405)
T ss_dssp             HHHHHH-HTCSEEEECCCCSSSCCCCCBCHHHHTTSCTT-CEEEETTGGGTC-SBTTCCTTEEEEETTEEEEECS
T ss_pred             HHHHHh-cCCCEEEECCcCCCCCCCEEecHHHHhcCCCC-CEEEEEeCCCCC-CccccCCCCeEEECCEEEEEeC
Confidence            222221 16899999964322      236888999997 999999753322 12111 1 112 2788888765

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=98.13  E-value=1.9e-06  Score=77.14  Aligned_cols=94  Identities=18%  Similarity=0.175  Sum_probs=70.4

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHHcCCCE-EEcCCCCCccHHHHHHHHcCCCccEEEE
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVE  271 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~-g~~~Vi~~~~~~~~~~~~~~~G~~~-vv~~~~~~~~~~~~i~~~~~~g~Dvvid  271 (361)
                      +++.+||.+|+|. |..+..+++.. +. +|+++|.+++.++.+++.+... ++..+..+  +     .+.++.||+|+.
T Consensus        84 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~--~-----~~~~~~fD~v~~  154 (269)
T 1p91_A           84 DKATAVLDIGCGE-GYYTHAFADALPEI-TTFGLDVSKVAIKAAAKRYPQVTFCVASSHR--L-----PFSDTSMDAIIR  154 (269)
T ss_dssp             TTCCEEEEETCTT-STTHHHHHHTCTTS-EEEEEESCHHHHHHHHHHCTTSEEEECCTTS--C-----SBCTTCEEEEEE
T ss_pred             CCCCEEEEECCCC-CHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHhCCCcEEEEcchhh--C-----CCCCCceeEEEE
Confidence            6889999999988 99999999886 55 9999999999999998866432 22222111  1     022347999996


Q ss_pred             ccCChHHHHHHHHHhcCCCcEEEEEcC
Q 018072          272 CTGNIDNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       272 ~~g~~~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      . ..+..+..+.+.|+++ |++++...
T Consensus       155 ~-~~~~~l~~~~~~L~pg-G~l~~~~~  179 (269)
T 1p91_A          155 I-YAPCKAEELARVVKPG-GWVITATP  179 (269)
T ss_dssp             E-SCCCCHHHHHHHEEEE-EEEEEEEE
T ss_pred             e-CChhhHHHHHHhcCCC-cEEEEEEc
Confidence            4 4457889999999997 99887753

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=98.13  E-value=6.6e-06  Score=77.04  Aligned_cols=124  Identities=18%  Similarity=0.205  Sum_probs=83.5

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcC---------CCC--CccH---HHHHHH
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT---------SEH--DRPI---QEVIAE  260 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~---------~~~--~~~~---~~~i~~  260 (361)
                      ++.+|+|+|+|.+|+.+++.|+.+|+ +|+++++++++++.++++|++.+...         ...  +...   .+.+.+
T Consensus       183 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e  261 (381)
T 3p2y_A          183 KPASALVLGVGVAGLQALATAKRLGA-KTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED  261 (381)
T ss_dssp             CCCEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred             CCCEEEEECchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence            67899999999999999999999999 89999999999999999998643110         000  0000   112222


Q ss_pred             HcCCCccEEEEccCChH------HHHHHHHHhcCCCcEEEEEcCCCCCceeec-Chhh-hc-cccEEEEee
Q 018072          261 MTNGGVDRSVECTGNID------NMISAFECVHDGWGVAVLVGVPSKDAVFMT-KPIN-VL-NERTLKGTF  322 (361)
Q Consensus       261 ~~~~g~Dvvid~~g~~~------~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~-~~~~-~~-~~~~l~g~~  322 (361)
                      .. .++|+||.++..+.      .-+..++.|+++ +.++.++...+. .+.. .+.. +. +++++.+..
T Consensus       262 ~l-~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpG-sVIVDvA~d~GG-~~e~t~~~~~~~~~gV~~~~v~  329 (381)
T 3p2y_A          262 AI-TKFDIVITTALVPGRPAPRLVTAAAATGMQPG-SVVVDLAGETGG-NCELTEPGRTIVHHGVTITSPL  329 (381)
T ss_dssp             HH-TTCSEEEECCCCTTSCCCCCBCHHHHHTSCTT-CEEEETTGGGTC-SBTTCCTTCEEEETTEEEECCS
T ss_pred             HH-hcCCEEEECCCCCCcccceeecHHHHhcCCCC-cEEEEEeCCCCC-ccccccCCCeEEECCEEEEeeC
Confidence            22 27999999874321      236888999997 999999765432 2221 1111 22 677776654

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=98.09  E-value=6.6e-06  Score=74.52  Aligned_cols=101  Identities=16%  Similarity=0.120  Sum_probs=75.3

Q ss_pred             hhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc----CCCEEEcCCCCCccHHHHHHHHcCC
Q 018072          189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTNG  264 (361)
Q Consensus       189 ~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~----G~~~vv~~~~~~~~~~~~i~~~~~~  264 (361)
                      ..+++++|++||.+|+|+.++.++.+|+..|+ +|+++|.+++.++.+++.    |.+.+ .....+  ..    ++.++
T Consensus       116 ~la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga-~V~gIDis~~~l~~Ar~~~~~~gl~~v-~~v~gD--a~----~l~d~  187 (298)
T 3fpf_A          116 ALGRFRRGERAVFIGGGPLPLTGILLSHVYGM-RVNVVEIEPDIAELSRKVIEGLGVDGV-NVITGD--ET----VIDGL  187 (298)
T ss_dssp             HHTTCCTTCEEEEECCCSSCHHHHHHHHTTCC-EEEEEESSHHHHHHHHHHHHHHTCCSE-EEEESC--GG----GGGGC
T ss_pred             HHcCCCCcCEEEEECCCccHHHHHHHHHccCC-EEEEEECCHHHHHHHHHHHHhcCCCCe-EEEECc--hh----hCCCC
Confidence            35688999999999999877888888887888 999999999998888763    55322 122222  11    12335


Q ss_pred             CccEEEEccCCh---HHHHHHHHHhcCCCcEEEEEcC
Q 018072          265 GVDRSVECTGNI---DNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       265 g~Dvvid~~g~~---~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      .||+|+.....+   ..++.+.+.|+++ |+++....
T Consensus       188 ~FDvV~~~a~~~d~~~~l~el~r~LkPG-G~Lvv~~~  223 (298)
T 3fpf_A          188 EFDVLMVAALAEPKRRVFRNIHRYVDTE-TRIIYRTY  223 (298)
T ss_dssp             CCSEEEECTTCSCHHHHHHHHHHHCCTT-CEEEEEEC
T ss_pred             CcCEEEECCCccCHHHHHHHHHHHcCCC-cEEEEEcC
Confidence            899999876543   5788999999997 99987754

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.09  E-value=8.8e-06  Score=66.67  Aligned_cols=93  Identities=18%  Similarity=0.217  Sum_probs=66.2

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCCEEEcCCCCCccHHHHHHHHcCCCccEE
Q 018072          191 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRS  269 (361)
Q Consensus       191 ~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvv  269 (361)
                      ....++++|+|+|+|.+|...++.++..|. +|+++++++++.+.++ +.|...+. ....+   .+.+....-.++|+|
T Consensus        14 ~~~~~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~g~~~~~-~d~~~---~~~l~~~~~~~ad~V   88 (155)
T 2g1u_A           14 SKKQKSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNSEFSGFTVV-GDAAE---FETLKECGMEKADMV   88 (155)
T ss_dssp             ---CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCTTCCSEEEE-SCTTS---HHHHHTTTGGGCSEE
T ss_pred             hcccCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHhcCCCcEEE-ecCCC---HHHHHHcCcccCCEE
Confidence            445678999999999999999999999998 8999999999988776 66765332 22222   122332211279999


Q ss_pred             EEccCChHHHHHHHHHhcC
Q 018072          270 VECTGNIDNMISAFECVHD  288 (361)
Q Consensus       270 id~~g~~~~~~~~~~~l~~  288 (361)
                      |.+++.+.....+...++.
T Consensus        89 i~~~~~~~~~~~~~~~~~~  107 (155)
T 2g1u_A           89 FAFTNDDSTNFFISMNARY  107 (155)
T ss_dssp             EECSSCHHHHHHHHHHHHH
T ss_pred             EEEeCCcHHHHHHHHHHHH
Confidence            9999997766666666554

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.04  E-value=2.9e-05  Score=59.84  Aligned_cols=94  Identities=16%  Similarity=0.148  Sum_probs=63.8

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      .+.+|+|+|+|.+|...++.+...|..+|+++++++++.+.+...+...+. .+-.+  . +.+.+... ++|+||++++
T Consensus         4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~-~d~~~--~-~~~~~~~~-~~d~vi~~~~   78 (118)
T 3ic5_A            4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQ-VDAKD--E-AGLAKALG-GFDAVISAAP   78 (118)
T ss_dssp             TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEE-CCTTC--H-HHHHHHTT-TCSEEEECSC
T ss_pred             CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEE-ecCCC--H-HHHHHHHc-CCCEEEECCC
Confidence            356899999999999999999999933899999999999888866665432 22222  1 23333332 6999999998


Q ss_pred             ChHHHHHHHHHhcCCCcEEE
Q 018072          275 NIDNMISAFECVHDGWGVAV  294 (361)
Q Consensus       275 ~~~~~~~~~~~l~~~~G~iv  294 (361)
                      .......+..++..+ -.++
T Consensus        79 ~~~~~~~~~~~~~~g-~~~~   97 (118)
T 3ic5_A           79 FFLTPIIAKAAKAAG-AHYF   97 (118)
T ss_dssp             GGGHHHHHHHHHHTT-CEEE
T ss_pred             chhhHHHHHHHHHhC-CCEE
Confidence            644433343344443 4443

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.95  E-value=3.7e-06  Score=68.02  Aligned_cols=108  Identities=16%  Similarity=0.215  Sum_probs=75.4

Q ss_pred             chhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHH-HHHcCCCEEEcCCCCCccHHHH
Q 018072          179 GVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEV  257 (361)
Q Consensus       179 ~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~-~~~~G~~~vv~~~~~~~~~~~~  257 (361)
                      ++.++++++ +......+.+|+|+|+|.+|...++.++..|. +|+++++++++.+. +++++.+. ....+    +.+.
T Consensus         5 ~~sv~~~a~-~~~~~~~~~~v~iiG~G~iG~~~a~~l~~~g~-~v~v~~r~~~~~~~~a~~~~~~~-~~~~~----~~~~   77 (144)
T 3oj0_A            5 KVSIPSIVY-DIVRKNGGNKILLVGNGMLASEIAPYFSYPQY-KVTVAGRNIDHVRAFAEKYEYEY-VLIND----IDSL   77 (144)
T ss_dssp             CCSHHHHHH-HHHHHHCCCEEEEECCSHHHHHHGGGCCTTTC-EEEEEESCHHHHHHHHHHHTCEE-EECSC----HHHH
T ss_pred             cccHHHHHH-HHHHhccCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCHHHHHHHHHHhCCce-EeecC----HHHH
Confidence            445666664 44444459999999999999999998888898 59999999988765 56677532 22222    3333


Q ss_pred             HHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072          258 IAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       258 i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      +     .++|+|+++++.+..+... +.++++ +.++.++.+.
T Consensus        78 ~-----~~~Divi~at~~~~~~~~~-~~l~~g-~~vid~~~p~  113 (144)
T 3oj0_A           78 I-----KNNDVIITATSSKTPIVEE-RSLMPG-KLFIDLGNPP  113 (144)
T ss_dssp             H-----HTCSEEEECSCCSSCSBCG-GGCCTT-CEEEECCSSC
T ss_pred             h-----cCCCEEEEeCCCCCcEeeH-HHcCCC-CEEEEccCCc
Confidence            3     2589999999975433222 667776 8888887643

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=97.95  E-value=3.5e-05  Score=72.96  Aligned_cols=102  Identities=22%  Similarity=0.280  Sum_probs=78.6

Q ss_pred             hhhhhhhcC-CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHc
Q 018072          184 LGATLNVAK-PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT  262 (361)
Q Consensus       184 ~~a~~~~~~-~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~  262 (361)
                      +.++.+..+ .-.|++|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|... .     +  +.+.+    
T Consensus       207 ~~gi~rat~~~L~GktV~ViG~G~IGk~vA~~Lra~Ga-~Viv~D~dp~ra~~A~~~G~~v-~-----~--Leeal----  273 (435)
T 3gvp_A          207 LDGLKRTTDMMFGGKQVVVCGYGEVGKGCCAALKAMGS-IVYVTEIDPICALQACMDGFRL-V-----K--LNEVI----  273 (435)
T ss_dssp             HHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE-C-----C--HHHHT----
T ss_pred             HHHHHHhhCceecCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCChhhhHHHHHcCCEe-c-----c--HHHHH----
Confidence            344433333 4589999999999999999999999999 8999999998877777777532 1     1  32222    


Q ss_pred             CCCccEEEEccCChHHHH-HHHHHhcCCCcEEEEEcCCC
Q 018072          263 NGGVDRSVECTGNIDNMI-SAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       263 ~~g~Dvvid~~g~~~~~~-~~~~~l~~~~G~iv~~g~~~  300 (361)
                       ...|+|+.|+|....+. ..++.|+++ +.++.+|...
T Consensus       274 -~~ADIVi~atgt~~lI~~e~l~~MK~g-ailINvgrg~  310 (435)
T 3gvp_A          274 -RQVDIVITCTGNKNVVTREHLDRMKNS-CIVCNMGHSN  310 (435)
T ss_dssp             -TTCSEEEECSSCSCSBCHHHHHHSCTT-EEEEECSSTT
T ss_pred             -hcCCEEEECCCCcccCCHHHHHhcCCC-cEEEEecCCC
Confidence             25899999988766665 889999997 9999998654

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=97.94  E-value=4.3e-06  Score=77.62  Aligned_cols=104  Identities=19%  Similarity=0.231  Sum_probs=69.2

Q ss_pred             hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHHc----C------------CC-EEEcCCC
Q 018072          188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKF----G------------VT-DFVNTSE  249 (361)
Q Consensus       188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~~----G------------~~-~vv~~~~  249 (361)
                      .....+++|++||-+|+|. |..++.+++..|. .+|+++|.+++.++.+++.    |            .. .++..+.
T Consensus        98 l~~l~~~~g~~VLDiG~G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~  176 (336)
T 2b25_A           98 LSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDI  176 (336)
T ss_dssp             HHHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCT
T ss_pred             HHhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECCh
Confidence            4556789999999999987 8888888888764 4999999999988887652    1            11 1221111


Q ss_pred             CCccHHHHHHHHcCCCccEEEEccCChH-HHHHHHHHhcCCCcEEEEEcC
Q 018072          250 HDRPIQEVIAEMTNGGVDRSVECTGNID-NMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       250 ~~~~~~~~i~~~~~~g~Dvvid~~g~~~-~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      .+  .   ...+.++.||+|+-....+. .+..+.+.|+++ |++++...
T Consensus       177 ~~--~---~~~~~~~~fD~V~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~  220 (336)
T 2b25_A          177 SG--A---TEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHG-GVCAVYVV  220 (336)
T ss_dssp             TC--C---C-------EEEEEECSSSTTTTHHHHGGGEEEE-EEEEEEES
T ss_pred             HH--c---ccccCCCCeeEEEECCCCHHHHHHHHHHhcCCC-cEEEEEeC
Confidence            11  1   11122236999997665543 578899999997 99987653

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=97.94  E-value=3.1e-05  Score=68.60  Aligned_cols=104  Identities=21%  Similarity=0.204  Sum_probs=75.0

Q ss_pred             hhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHHc----CCCEEEcCCCCCccHHHHHHHH
Q 018072          187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEM  261 (361)
Q Consensus       187 ~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g-~~~Vi~~~~~~~~~~~~~~~----G~~~vv~~~~~~~~~~~~i~~~  261 (361)
                      +.....++++++||-+|+|. |..+..+++..+ ..+|+++|.+++..+.+++.    |....+.....+  +.+   .+
T Consensus        85 i~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d--~~~---~~  158 (255)
T 3mb5_A           85 IVAYAGISPGDFIVEAGVGS-GALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKD--IYE---GI  158 (255)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSC--GGG---CC
T ss_pred             HHHhhCCCCCCEEEEecCCc-hHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECc--hhh---cc
Confidence            34567889999999999987 888889998853 34999999999988887653    543211111222  111   12


Q ss_pred             cCCCccEEEEccCChH-HHHHHHHHhcCCCcEEEEEc
Q 018072          262 TNGGVDRSVECTGNID-NMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       262 ~~~g~Dvvid~~g~~~-~~~~~~~~l~~~~G~iv~~g  297 (361)
                      .++.+|+|+.....+. .+..+.+.|+++ |+++++.
T Consensus       159 ~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~  194 (255)
T 3mb5_A          159 EEENVDHVILDLPQPERVVEHAAKALKPG-GFFVAYT  194 (255)
T ss_dssp             CCCSEEEEEECSSCGGGGHHHHHHHEEEE-EEEEEEE
T ss_pred             CCCCcCEEEECCCCHHHHHHHHHHHcCCC-CEEEEEE
Confidence            2337999999887654 788999999997 9998875

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.83  E-value=0.00016  Score=60.62  Aligned_cols=95  Identities=16%  Similarity=0.270  Sum_probs=67.9

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHH-cCCCccEEEEcc
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEM-TNGGVDRSVECT  273 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~-g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~-~~~g~Dvvid~~  273 (361)
                      +++|+|+|+|.+|...++.++.. |. +|+++++++++.+.+++.|...+.- +..+   .+.+.+. .-.++|+||.++
T Consensus        39 ~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~~g~~~~~g-d~~~---~~~l~~~~~~~~ad~vi~~~  113 (183)
T 3c85_A           39 HAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREEAAQQHRSEGRNVISG-DATD---PDFWERILDTGHVKLVLLAM  113 (183)
T ss_dssp             TCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHHTTCCEEEC-CTTC---HHHHHTBCSCCCCCEEEECC
T ss_pred             CCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHHCCCCEEEc-CCCC---HHHHHhccCCCCCCEEEEeC
Confidence            67899999999999999999998 98 8999999999999998888765442 1122   1233333 123799999999


Q ss_pred             CChHHHHHHHHHhcC---CCcEEEEE
Q 018072          274 GNIDNMISAFECVHD---GWGVAVLV  296 (361)
Q Consensus       274 g~~~~~~~~~~~l~~---~~G~iv~~  296 (361)
                      ++......+...++.   . .+++..
T Consensus       114 ~~~~~~~~~~~~~~~~~~~-~~ii~~  138 (183)
T 3c85_A          114 PHHQGNQTALEQLQRRNYK-GQIAAI  138 (183)
T ss_dssp             SSHHHHHHHHHHHHHTTCC-SEEEEE
T ss_pred             CChHHHHHHHHHHHHHCCC-CEEEEE
Confidence            986654444444443   3 455543

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=97.79  E-value=0.0001  Score=66.13  Aligned_cols=105  Identities=21%  Similarity=0.274  Sum_probs=73.8

Q ss_pred             hhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHHc-----C--CCEEEcCCCCCccHHHHH
Q 018072          187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKF-----G--VTDFVNTSEHDRPIQEVI  258 (361)
Q Consensus       187 ~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g-~~~Vi~~~~~~~~~~~~~~~-----G--~~~vv~~~~~~~~~~~~i  258 (361)
                      +.....++++++||-+|+| .|..+..+++..+ ..+|+++|.+++..+.+++.     |  .+.+. ....+  +.+. 
T Consensus        91 i~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~-~~~~d--~~~~-  165 (280)
T 1i9g_A           91 IVHEGDIFPGARVLEAGAG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWR-LVVSD--LADS-  165 (280)
T ss_dssp             HHHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEE-EECSC--GGGC-
T ss_pred             HHHHcCCCCCCEEEEEccc-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEE-EEECc--hHhc-
Confidence            3456778999999999998 6888889998764 34999999999988887653     4  22211 11111  1100 


Q ss_pred             HHHcCCCccEEEEccCCh-HHHHHHHHHhcCCCcEEEEEcC
Q 018072          259 AEMTNGGVDRSVECTGNI-DNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       259 ~~~~~~g~Dvvid~~g~~-~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                       .+.++.+|+|+.....+ ..+..+.+.|+++ |++++...
T Consensus       166 -~~~~~~~D~v~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~  204 (280)
T 1i9g_A          166 -ELPDGSVDRAVLDMLAPWEVLDAVSRLLVAG-GVLMVYVA  204 (280)
T ss_dssp             -CCCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEES
T ss_pred             -CCCCCceeEEEECCcCHHHHHHHHHHhCCCC-CEEEEEeC
Confidence             01223799999877665 6788999999997 99888754

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.77  E-value=0.00011  Score=66.80  Aligned_cols=95  Identities=19%  Similarity=0.244  Sum_probs=72.5

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  273 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~  273 (361)
                      -.|.+|+|+|.|.+|..+++.++..|. +|++++++.++.+.+.++|+.. ++..    ++.+    +. ...|+|+.++
T Consensus       153 l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~-~~~~----~l~~----~l-~~aDvVi~~~  221 (293)
T 3d4o_A          153 IHGANVAVLGLGRVGMSVARKFAALGA-KVKVGARESDLLARIAEMGMEP-FHIS----KAAQ----EL-RDVDVCINTI  221 (293)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTSEE-EEGG----GHHH----HT-TTCSEEEECC
T ss_pred             CCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHCCCee-cChh----hHHH----Hh-cCCCEEEECC
Confidence            468999999999999999999999999 9999999998887777888753 2211    1222    22 2689999999


Q ss_pred             CChHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072          274 GNIDNMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       274 g~~~~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      +..-.-...++.++++ +.++.++..+
T Consensus       222 p~~~i~~~~l~~mk~~-~~lin~ar~~  247 (293)
T 3d4o_A          222 PALVVTANVLAEMPSH-TFVIDLASKP  247 (293)
T ss_dssp             SSCCBCHHHHHHSCTT-CEEEECSSTT
T ss_pred             ChHHhCHHHHHhcCCC-CEEEEecCCC
Confidence            7532234677889997 9999998644

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.75  E-value=0.0004  Score=55.57  Aligned_cols=96  Identities=13%  Similarity=0.097  Sum_probs=68.2

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      ..++|+|+|.|.+|...++.++..|. .|+++++++++.+.+++.|...+. -+..+   .+.+....-.++|+++.+++
T Consensus         6 ~~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~~g~~~i~-gd~~~---~~~l~~a~i~~ad~vi~~~~   80 (140)
T 3fwz_A            6 ICNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRTRVDELRERGVRAVL-GNAAN---EEIMQLAHLECAKWLILTIP   80 (140)
T ss_dssp             CCSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEEE-SCTTS---HHHHHHTTGGGCSEEEECCS
T ss_pred             CCCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHcCCCEEE-CCCCC---HHHHHhcCcccCCEEEEECC
Confidence            34689999999999999999999998 899999999999999988876543 22222   12333322237899999999


Q ss_pred             ChHHHH---HHHHHhcCCCcEEEEE
Q 018072          275 NIDNMI---SAFECVHDGWGVAVLV  296 (361)
Q Consensus       275 ~~~~~~---~~~~~l~~~~G~iv~~  296 (361)
                      ......   ...+.+.+. .+++.-
T Consensus        81 ~~~~n~~~~~~a~~~~~~-~~iiar  104 (140)
T 3fwz_A           81 NGYEAGEIVASARAKNPD-IEIIAR  104 (140)
T ss_dssp             CHHHHHHHHHHHHHHCSS-SEEEEE
T ss_pred             ChHHHHHHHHHHHHHCCC-CeEEEE
Confidence            855322   344455555 555543

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.75  E-value=5.8e-05  Score=72.76  Aligned_cols=91  Identities=23%  Similarity=0.286  Sum_probs=72.8

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  273 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~  273 (361)
                      -.|++++|+|+|++|...++.++..|+ +|+++++++.+.+.+...|++ +.+..+            ....+|+++++.
T Consensus       263 L~GKtVvVtGaGgIG~aiA~~Laa~GA-~Viv~D~~~~~a~~Aa~~g~d-v~~lee------------~~~~aDvVi~at  328 (488)
T 3ond_A          263 IAGKVAVVAGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQATMEGLQ-VLTLED------------VVSEADIFVTTT  328 (488)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-ECCGGG------------TTTTCSEEEECS
T ss_pred             ccCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHhCCc-cCCHHH------------HHHhcCEEEeCC
Confidence            478999999999999999999999999 999999999988888777763 211110            012689999999


Q ss_pred             CChHHHH-HHHHHhcCCCcEEEEEcCC
Q 018072          274 GNIDNMI-SAFECVHDGWGVAVLVGVP  299 (361)
Q Consensus       274 g~~~~~~-~~~~~l~~~~G~iv~~g~~  299 (361)
                      |..+.+. ..++.++++ +.++.+|..
T Consensus       329 G~~~vl~~e~l~~mk~g-aiVvNaG~~  354 (488)
T 3ond_A          329 GNKDIIMLDHMKKMKNN-AIVCNIGHF  354 (488)
T ss_dssp             SCSCSBCHHHHTTSCTT-EEEEESSST
T ss_pred             CChhhhhHHHHHhcCCC-eEEEEcCCC
Confidence            9866664 488889997 999999864

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=97.69  E-value=0.00013  Score=69.21  Aligned_cols=93  Identities=25%  Similarity=0.239  Sum_probs=74.2

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEc
Q 018072          193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  272 (361)
Q Consensus       193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~  272 (361)
                      .-.|++|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|... ++       +.+.+     ...|+|+.+
T Consensus       244 ~L~GKTVgVIG~G~IGr~vA~~lrafGa-~Viv~d~dp~~a~~A~~~G~~v-v~-------LeElL-----~~ADIVv~a  309 (464)
T 3n58_A          244 MMAGKVAVVCGYGDVGKGSAQSLAGAGA-RVKVTEVDPICALQAAMDGFEV-VT-------LDDAA-----STADIVVTT  309 (464)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCEE-CC-------HHHHG-----GGCSEEEEC
T ss_pred             cccCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCcchhhHHHhcCcee-cc-------HHHHH-----hhCCEEEEC
Confidence            4689999999999999999999999999 9999999988776666677642 11       33222     258999999


Q ss_pred             cCChHHH-HHHHHHhcCCCcEEEEEcCCC
Q 018072          273 TGNIDNM-ISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       273 ~g~~~~~-~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      ++....+ ...++.|+++ +.++.+|...
T Consensus       310 tgt~~lI~~e~l~~MK~G-AILINvGRgd  337 (464)
T 3n58_A          310 TGNKDVITIDHMRKMKDM-CIVGNIGHFD  337 (464)
T ss_dssp             CSSSSSBCHHHHHHSCTT-EEEEECSSST
T ss_pred             CCCccccCHHHHhcCCCC-eEEEEcCCCC
Confidence            9876555 5888999997 9999998654

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.61  E-value=0.00056  Score=54.60  Aligned_cols=78  Identities=18%  Similarity=0.273  Sum_probs=59.0

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  275 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~  275 (361)
                      ..+|+|+|+|.+|...++.+...|. +|+++++++++.+.+++.|...+. .+..+   .+.+....-.++|+++.++++
T Consensus         6 ~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~~~~~~~~-gd~~~---~~~l~~~~~~~~d~vi~~~~~   80 (141)
T 3llv_A            6 RYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSKEKIELLEDEGFDAVI-ADPTD---ESFYRSLDLEGVSAVLITGSD   80 (141)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEEE-CCTTC---HHHHHHSCCTTCSEEEECCSC
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHCCCcEEE-CCCCC---HHHHHhCCcccCCEEEEecCC
Confidence            4679999999999999999999998 899999999999998887765433 22222   223433322379999999997


Q ss_pred             hHH
Q 018072          276 IDN  278 (361)
Q Consensus       276 ~~~  278 (361)
                      .+.
T Consensus        81 ~~~   83 (141)
T 3llv_A           81 DEF   83 (141)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            543

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.59  E-value=0.00023  Score=64.84  Aligned_cols=95  Identities=20%  Similarity=0.258  Sum_probs=71.9

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  273 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~  273 (361)
                      -.|.+|+|+|+|.+|..+++.++..|. +|++++++.++.+.+.++|+. .++..    ++.    ++. .+.|+|+.++
T Consensus       155 l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~-~~~~~----~l~----~~l-~~aDvVi~~~  223 (300)
T 2rir_A          155 IHGSQVAVLGLGRTGMTIARTFAALGA-NVKVGARSSAHLARITEMGLV-PFHTD----ELK----EHV-KDIDICINTI  223 (300)
T ss_dssp             STTSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCE-EEEGG----GHH----HHS-TTCSEEEECC
T ss_pred             CCCCEEEEEcccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCe-EEchh----hHH----HHh-hCCCEEEECC
Confidence            468999999999999999999999999 999999999888777777764 22211    122    222 2689999999


Q ss_pred             CChHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072          274 GNIDNMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       274 g~~~~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      +..-.-+..++.++++ +.++.++..+
T Consensus       224 p~~~i~~~~~~~mk~g-~~lin~a~g~  249 (300)
T 2rir_A          224 PSMILNQTVLSSMTPK-TLILDLASRP  249 (300)
T ss_dssp             SSCCBCHHHHTTSCTT-CEEEECSSTT
T ss_pred             ChhhhCHHHHHhCCCC-CEEEEEeCCC
Confidence            8632224567788887 9999998644

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=97.43  E-value=0.0002  Score=62.98  Aligned_cols=103  Identities=15%  Similarity=0.139  Sum_probs=67.3

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCE-EEcCCCCCccHHHHHHHHcCCCccEEEE
Q 018072          194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVE  271 (361)
Q Consensus       194 ~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~-vv~~~~~~~~~~~~i~~~~~~g~Dvvid  271 (361)
                      =.|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++....-.+.. ..|..+. +++.+.+.++  +++|++++
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga-~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~--g~iDiLVN   84 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGA-EVVALGLDADGVHAPRHPRIRREELDITDS-QRLQRLFEAL--PRLDVLVN   84 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTSTTSCCCTTEEEEECCTTCH-HHHHHHHHHC--SCCSEEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHhhhhcCCeEEEEecCCCH-HHHHHHHHhc--CCCCEEEE
Confidence            36999999987 8999999999999999 9999999988765432211111 1222222 2233333332  47999999


Q ss_pred             ccCChH-----------------------HHHHHHHHhcCCCcEEEEEcCCC
Q 018072          272 CTGNID-----------------------NMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       272 ~~g~~~-----------------------~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      ++|-..                       ..+.+++.|+..+|+|+.++...
T Consensus        85 NAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~  136 (242)
T 4b79_A           85 NAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMY  136 (242)
T ss_dssp             CCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGG
T ss_pred             CCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeecc
Confidence            988411                       11345556654339999997644

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.41  E-value=0.00032  Score=55.78  Aligned_cols=76  Identities=14%  Similarity=0.266  Sum_probs=55.0

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  275 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~  275 (361)
                      +++|+|+|+|.+|...++.+...|. +|+++++++++.+.+++.+... +..+..+   .+.+.+..-+++|+++.+++.
T Consensus         6 ~~~v~I~G~G~iG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~~~~~-~~~d~~~---~~~l~~~~~~~~d~vi~~~~~   80 (144)
T 2hmt_A            6 NKQFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASYATHA-VIANATE---ENELLSLGIRNFEYVIVAIGA   80 (144)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHTTTTTCSEE-EECCTTC---HHHHHTTTGGGCSEEEECCCS
T ss_pred             CCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCEE-EEeCCCC---HHHHHhcCCCCCCEEEECCCC
Confidence            4679999999999999999999998 7999999998887776666543 3222222   123333211379999999997


Q ss_pred             h
Q 018072          276 I  276 (361)
Q Consensus       276 ~  276 (361)
                      +
T Consensus        81 ~   81 (144)
T 2hmt_A           81 N   81 (144)
T ss_dssp             C
T ss_pred             c
Confidence            4

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=97.38  E-value=0.00049  Score=61.73  Aligned_cols=104  Identities=19%  Similarity=0.317  Sum_probs=71.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCCCEE-EcCCCCC-ccHHHHHHHHcC--CCccE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDF-VNTSEHD-RPIQEVIAEMTN--GGVDR  268 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~-~~~G~~~v-v~~~~~~-~~~~~~i~~~~~--~g~Dv  268 (361)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+ +++|.... +..+-.+ .++.+.+.....  +++|+
T Consensus        28 ~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi  106 (273)
T 4fgs_A           28 NAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDV  106 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5889999988 8999999999999999 999999999987765 45665432 2222222 223333333322  37999


Q ss_pred             EEEccCCh----------H---------------HHHHHHHHhcCCCcEEEEEcCCC
Q 018072          269 SVECTGNI----------D---------------NMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       269 vid~~g~~----------~---------------~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      +++++|..          +               ....+++.|+++ |+++.++...
T Consensus       107 LVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~-G~IInisS~~  162 (273)
T 4fgs_A          107 LFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARG-SSVVLTGSTA  162 (273)
T ss_dssp             EEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEE-EEEEEECCGG
T ss_pred             EEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhC-CeEEEEeehh
Confidence            99998741          1               124555677776 9999987543

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=97.38  E-value=0.00046  Score=59.00  Aligned_cols=101  Identities=20%  Similarity=0.266  Sum_probs=71.7

Q ss_pred             hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCC-EE-EcCCCCCccHHHHHHHH
Q 018072          188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DF-VNTSEHDRPIQEVIAEM  261 (361)
Q Consensus       188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~-~v-v~~~~~~~~~~~~i~~~  261 (361)
                      .....++++++||-+|+|. |..++.+|+. +. +|+++|.+++.++.+++    +|.. .+ +...+..    +.   +
T Consensus        48 l~~l~~~~~~~vLDlGcG~-G~~~~~la~~-~~-~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~----~~---~  117 (204)
T 3njr_A           48 LAALAPRRGELLWDIGGGS-GSVSVEWCLA-GG-RAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAP----AA---L  117 (204)
T ss_dssp             HHHHCCCTTCEEEEETCTT-CHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTT----GG---G
T ss_pred             HHhcCCCCCCEEEEecCCC-CHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchh----hh---c
Confidence            4556788999999999986 8888888887 66 99999999998888765    4554 21 1111111    11   1


Q ss_pred             cC-CCccEEEEccCChH-HHHHHHHHhcCCCcEEEEEcCC
Q 018072          262 TN-GGVDRSVECTGNID-NMISAFECVHDGWGVAVLVGVP  299 (361)
Q Consensus       262 ~~-~g~Dvvid~~g~~~-~~~~~~~~l~~~~G~iv~~g~~  299 (361)
                      .. +.+|+|+...+... .++.+.+.|+++ |++++....
T Consensus       118 ~~~~~~D~v~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~~  156 (204)
T 3njr_A          118 ADLPLPEAVFIGGGGSQALYDRLWEWLAPG-TRIVANAVT  156 (204)
T ss_dssp             TTSCCCSEEEECSCCCHHHHHHHHHHSCTT-CEEEEEECS
T ss_pred             ccCCCCCEEEECCcccHHHHHHHHHhcCCC-cEEEEEecC
Confidence            11 26999997754323 788999999998 999887643

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=97.37  E-value=0.00098  Score=56.06  Aligned_cols=100  Identities=18%  Similarity=0.140  Sum_probs=66.8

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcCC---------CeEEEEcCChhhHHHHHHcCCCEEE-cCCCCCccHHHHHHHH
Q 018072          192 KPERGSSVAVFGLGAVGLAAAEGARIAGA---------SRIIGVDRSSKRFEEAKKFGVTDFV-NTSEHDRPIQEVIAEM  261 (361)
Q Consensus       192 ~~~~g~~VlI~G~g~vG~~a~~~a~~~g~---------~~Vi~~~~~~~~~~~~~~~G~~~vv-~~~~~~~~~~~~i~~~  261 (361)
                      .++++++||.+|+|+ |..+..+++..+.         .+|+++|.++.+.     ......+ ..+-.+....+.+...
T Consensus        19 ~~~~~~~vLDlGcG~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~-----~~~~~~~~~~d~~~~~~~~~~~~~   92 (196)
T 2nyu_A           19 ILRPGLRVLDCGAAP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP-----LEGATFLCPADVTDPRTSQRILEV   92 (196)
T ss_dssp             CCCTTCEEEEETCCS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC-----CTTCEEECSCCTTSHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCC-CHHHHHHHHHhccccccccCCCceEEEEechhccc-----CCCCeEEEeccCCCHHHHHHHHHh
Confidence            368899999999988 9999999999874         4899999988531     1111233 2222222233344444


Q ss_pred             cCC-CccEEEE-----ccCCh------------HHHHHHHHHhcCCCcEEEEEcC
Q 018072          262 TNG-GVDRSVE-----CTGNI------------DNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       262 ~~~-g~Dvvid-----~~g~~------------~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      .++ .||+|+.     +++..            ..+..+.+.|+++ |++++.-.
T Consensus        93 ~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~~~~  146 (196)
T 2nyu_A           93 LPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPG-GTFLCKTW  146 (196)
T ss_dssp             SGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             cCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCC-CEEEEEec
Confidence            444 7999994     33331            4577888999997 99987644

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=97.33  E-value=0.00071  Score=59.59  Aligned_cols=105  Identities=14%  Similarity=0.071  Sum_probs=75.1

Q ss_pred             hhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHHc-----CCCEEEcCCCCCccHHHHHHH
Q 018072          187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKF-----GVTDFVNTSEHDRPIQEVIAE  260 (361)
Q Consensus       187 ~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g-~~~Vi~~~~~~~~~~~~~~~-----G~~~vv~~~~~~~~~~~~i~~  260 (361)
                      +.....++++++||-+|+|. |..+..+++..+ ..+|+++|.+++..+.+++.     |.+.+. ....+  +.+.  .
T Consensus        88 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~-~~~~d--~~~~--~  161 (258)
T 2pwy_A           88 MVTLLDLAPGMRVLEAGTGS-GGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVR-FHLGK--LEEA--E  161 (258)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEE-EEESC--GGGC--C
T ss_pred             HHHHcCCCCCCEEEEECCCc-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEE-EEECc--hhhc--C
Confidence            34567789999999999985 888999998864 34999999999988888764     633221 11111  1100  0


Q ss_pred             HcCCCccEEEEccCCh-HHHHHHHHHhcCCCcEEEEEcC
Q 018072          261 MTNGGVDRSVECTGNI-DNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       261 ~~~~g~Dvvid~~g~~-~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      +.++.+|+|+.....+ ..+..+.+.|+++ |+++++..
T Consensus       162 ~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  199 (258)
T 2pwy_A          162 LEEAAYDGVALDLMEPWKVLEKAALALKPD-RFLVAYLP  199 (258)
T ss_dssp             CCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEES
T ss_pred             CCCCCcCEEEECCcCHHHHHHHHHHhCCCC-CEEEEEeC
Confidence            2224799999877765 6788999999997 99988753

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=97.30  E-value=0.0015  Score=58.03  Aligned_cols=79  Identities=16%  Similarity=0.304  Sum_probs=51.2

Q ss_pred             CCCEEEEEcC-CH--HHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCC--CEEE--cCCCCCccHHHHHHHHcC
Q 018072          195 RGSSVAVFGL-GA--VGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGV--TDFV--NTSEHDRPIQEVIAEMTN  263 (361)
Q Consensus       195 ~g~~VlI~G~-g~--vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~--~~vv--~~~~~~~~~~~~i~~~~~  263 (361)
                      .|.++||+|+ |.  +|...++.+...|+ +|+.++++++..+.+++    ++.  -..+  |..+. .++.+.+.....
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~   83 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTND-AEIETCFASIKE   83 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSS-HHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCH-HHHHHHHHHHHH
Confidence            4679999987 66  99999998888899 89999888755444433    333  1222  23222 224444443322


Q ss_pred             --CCccEEEEccCC
Q 018072          264 --GGVDRSVECTGN  275 (361)
Q Consensus       264 --~g~Dvvid~~g~  275 (361)
                        +.+|++++++|.
T Consensus        84 ~~g~id~li~~Ag~   97 (266)
T 3oig_A           84 QVGVIHGIAHCIAF   97 (266)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             HhCCeeEEEEcccc
Confidence              368999999874

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=97.30  E-value=0.0017  Score=56.37  Aligned_cols=96  Identities=19%  Similarity=0.182  Sum_probs=65.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCC-CEEE-cCCCCCccHHHHHHHHcCCCccEEEE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV-TDFV-NTSEHDRPIQEVIAEMTNGGVDRSVE  271 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~-~~vv-~~~~~~~~~~~~i~~~~~~g~Dvvid  271 (361)
                      .+.+|||+|+ |.+|...++.+...|. +|+++++++++.+.+.+.++ ..+. |..       +.+.+.. +++|+||+
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~-------~~~~~~~-~~~D~vi~   90 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGH-EPVAMVRNEEQGPELRERGASDIVVANLE-------EDFSHAF-ASIDAVVF   90 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHTTCSEEEECCTT-------SCCGGGG-TTCSEEEE
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCC-eEEEEECChHHHHHHHhCCCceEEEcccH-------HHHHHHH-cCCCEEEE
Confidence            4679999998 9999999999988998 99999999999888877776 4322 222       1122222 27999999


Q ss_pred             ccCChH-------------HHHHHHHHhc--CCCcEEEEEcCCC
Q 018072          272 CTGNID-------------NMISAFECVH--DGWGVAVLVGVPS  300 (361)
Q Consensus       272 ~~g~~~-------------~~~~~~~~l~--~~~G~iv~~g~~~  300 (361)
                      ++|...             .....++.++  .. ++++.++...
T Consensus        91 ~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~iv~~SS~~  133 (236)
T 3e8x_A           91 AAGSGPHTGADKTILIDLWGAIKTIQEAEKRGI-KRFIMVSSVG  133 (236)
T ss_dssp             CCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTC-CEEEEECCTT
T ss_pred             CCCCCCCCCccccchhhHHHHHHHHHHHHHcCC-CEEEEEecCC
Confidence            998521             1122333333  23 6899988755

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=97.28  E-value=0.0025  Score=55.93  Aligned_cols=79  Identities=14%  Similarity=0.162  Sum_probs=54.3

Q ss_pred             CCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCEEEc-CCCCCccHHHHHHHHcC--CCcc
Q 018072          193 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVN-TSEHDRPIQEVIAEMTN--GGVD  267 (361)
Q Consensus       193 ~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~vv~-~~~~~~~~~~~i~~~~~--~g~D  267 (361)
                      ..++.+|||+|+ |++|...++.+...|+ +|+++++++++++.+.+ +.....+. .+-.+  . +.+.++..  +++|
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~--~-~~~~~~~~~~~~id   86 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKLGS-KVIISGSNEEKLKSLGNALKDNYTIEVCNLAN--K-EECSNLISKTSNLD   86 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECCTTS--H-HHHHHHHHTCSCCS
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhccCccEEEcCCCC--H-HHHHHHHHhcCCCC
Confidence            467889999988 9999999998888998 89999999988776643 44333222 22222  1 12222222  3799


Q ss_pred             EEEEccCC
Q 018072          268 RSVECTGN  275 (361)
Q Consensus       268 vvid~~g~  275 (361)
                      ++|+++|.
T Consensus        87 ~li~~Ag~   94 (249)
T 3f9i_A           87 ILVCNAGI   94 (249)
T ss_dssp             EEEECCC-
T ss_pred             EEEECCCC
Confidence            99999884

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=97.27  E-value=0.0033  Score=53.27  Aligned_cols=101  Identities=16%  Similarity=0.187  Sum_probs=72.8

Q ss_pred             hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCE--EEcCCCCCccHHHHHHHH
Q 018072          188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD--FVNTSEHDRPIQEVIAEM  261 (361)
Q Consensus       188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~--vv~~~~~~~~~~~~i~~~  261 (361)
                      ....+++++++||-+|+|. |..++.+++..+..+|+++|.+++.++.+++    .|.+.  ++..+..+     .   +
T Consensus        33 l~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~-----~---~  103 (204)
T 3e05_A           33 LSKLRLQDDLVMWDIGAGS-ASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPE-----G---L  103 (204)
T ss_dssp             HHHTTCCTTCEEEEETCTT-CHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTT-----T---C
T ss_pred             HHHcCCCCCCEEEEECCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhh-----h---h
Confidence            4566789999999999985 8888999988644599999999998888765    34432  22211111     0   1


Q ss_pred             cC-CCccEEEEccC---ChHHHHHHHHHhcCCCcEEEEEcC
Q 018072          262 TN-GGVDRSVECTG---NIDNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       262 ~~-~g~Dvvid~~g---~~~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      .. +.+|+|+....   ....+..+.+.|+++ |++++...
T Consensus       104 ~~~~~~D~i~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  143 (204)
T 3e05_A          104 DDLPDPDRVFIGGSGGMLEEIIDAVDRRLKSE-GVIVLNAV  143 (204)
T ss_dssp             TTSCCCSEEEESCCTTCHHHHHHHHHHHCCTT-CEEEEEEC
T ss_pred             hcCCCCCEEEECCCCcCHHHHHHHHHHhcCCC-eEEEEEec
Confidence            11 36999998765   245778899999998 99988754

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=97.23  E-value=0.00049  Score=65.35  Aligned_cols=90  Identities=24%  Similarity=0.306  Sum_probs=71.5

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  273 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~  273 (361)
                      -.|.+|+|+|.|.+|...++.++.+|+ +|+++++++.+...+...|....      +  +.+.+     ...|+|+.+.
T Consensus       209 L~GktVgIiG~G~IG~~vA~~Lka~Ga-~Viv~D~~p~~a~~A~~~G~~~~------s--L~eal-----~~ADVVilt~  274 (436)
T 3h9u_A          209 IAGKTACVCGYGDVGKGCAAALRGFGA-RVVVTEVDPINALQAAMEGYQVL------L--VEDVV-----EEAHIFVTTT  274 (436)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC------C--HHHHT-----TTCSEEEECS
T ss_pred             ccCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCChhhhHHHHHhCCeec------C--HHHHH-----hhCCEEEECC
Confidence            468999999999999999999999999 89999999988877777776421      1  33332     2589999988


Q ss_pred             CChHHHH-HHHHHhcCCCcEEEEEcC
Q 018072          274 GNIDNMI-SAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       274 g~~~~~~-~~~~~l~~~~G~iv~~g~  298 (361)
                      +....+. ..++.|+++ ..++.+|.
T Consensus       275 gt~~iI~~e~l~~MK~g-AIVINvgR  299 (436)
T 3h9u_A          275 GNDDIITSEHFPRMRDD-AIVCNIGH  299 (436)
T ss_dssp             SCSCSBCTTTGGGCCTT-EEEEECSS
T ss_pred             CCcCccCHHHHhhcCCC-cEEEEeCC
Confidence            8755554 677888987 88888874

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=97.21  E-value=0.001  Score=58.85  Aligned_cols=104  Identities=19%  Similarity=0.259  Sum_probs=67.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCE-EEcCCCCC-ccHHHHHHHHcC--CCccE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD-FVNTSEHD-RPIQEVIAEMTN--GGVDR  268 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g~Dv  268 (361)
                      .|.++||+|+ +++|...++.+...|+ +|+.+++++++++.+.+ ++... .+..+-.+ .++.+.+.....  +++|+
T Consensus         7 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   85 (255)
T 4eso_A            7 QGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDL   85 (255)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            5789999987 9999999999889999 89999999988776543 44432 22222222 123333332221  37999


Q ss_pred             EEEccCCh----------HH---------------HHHHHHHhcCCCcEEEEEcCCC
Q 018072          269 SVECTGNI----------DN---------------MISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       269 vid~~g~~----------~~---------------~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      +++++|..          +.               .+.+++.+++. |+++.++...
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-g~iv~isS~~  141 (255)
T 4eso_A           86 LHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREG-GSIVFTSSVA  141 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE-EEEEEECCGG
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcC-CEEEEECChh
Confidence            99998742          11               12333445566 8999997644

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=97.21  E-value=0.00025  Score=61.81  Aligned_cols=103  Identities=17%  Similarity=0.178  Sum_probs=70.1

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc----CCCEEEcCCCCCccHHHHHHHHc-CCC
Q 018072          191 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMT-NGG  265 (361)
Q Consensus       191 ~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~----G~~~vv~~~~~~~~~~~~i~~~~-~~g  265 (361)
                      ....++++||-+|+| .|..+..+++..+..+|++++.+++.++.+++.    |....+.....+  ..+.+.... ++.
T Consensus        50 ~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d--~~~~~~~~~~~~~  126 (233)
T 2gpy_A           50 LKMAAPARILEIGTA-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGD--ALQLGEKLELYPL  126 (233)
T ss_dssp             HHHHCCSEEEEECCT-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSC--GGGSHHHHTTSCC
T ss_pred             HhccCCCEEEEecCC-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECC--HHHHHHhcccCCC
Confidence            345678899999998 588888999887434999999999988887653    543111111112  111222222 347


Q ss_pred             ccEEEEccCC---hHHHHHHHHHhcCCCcEEEEEc
Q 018072          266 VDRSVECTGN---IDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       266 ~Dvvid~~g~---~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      ||+|+.....   ...+..+.+.|+++ |++++..
T Consensus       127 fD~I~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~~  160 (233)
T 2gpy_A          127 FDVLFIDAAKGQYRRFFDMYSPMVRPG-GLILSDN  160 (233)
T ss_dssp             EEEEEEEGGGSCHHHHHHHHGGGEEEE-EEEEEET
T ss_pred             ccEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEEc
Confidence            9999987653   35677888899997 9988763

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=97.20  E-value=0.00024  Score=62.04  Aligned_cols=101  Identities=21%  Similarity=0.206  Sum_probs=71.8

Q ss_pred             hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcC
Q 018072          188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN  263 (361)
Q Consensus       188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~  263 (361)
                      .+...++++++||.+|+| .|..+..+++..+ .+|+++|.+++..+.+++    .|...+ .....+  .   ...+..
T Consensus        84 ~~~l~~~~~~~vLdiG~G-~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v-~~~~~d--~---~~~~~~  155 (235)
T 1jg1_A           84 LEIANLKPGMNILEVGTG-SGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNV-HVILGD--G---SKGFPP  155 (235)
T ss_dssp             HHHHTCCTTCCEEEECCT-TSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSE-EEEESC--G---GGCCGG
T ss_pred             HHhcCCCCCCEEEEEeCC-cCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCc-EEEECC--c---ccCCCC
Confidence            455678899999999998 6999999999887 499999999998887765    454332 111111  1   001122


Q ss_pred             C-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEc
Q 018072          264 G-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       264 ~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      . +||+|+.+..-......+.+.|+++ |++++.-
T Consensus       156 ~~~fD~Ii~~~~~~~~~~~~~~~L~pg-G~lvi~~  189 (235)
T 1jg1_A          156 KAPYDVIIVTAGAPKIPEPLIEQLKIG-GKLIIPV  189 (235)
T ss_dssp             GCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEEE
T ss_pred             CCCccEEEECCcHHHHHHHHHHhcCCC-cEEEEEE
Confidence            2 5999998876655667888999997 9887653

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=97.18  E-value=0.00056  Score=56.51  Aligned_cols=102  Identities=19%  Similarity=0.185  Sum_probs=72.8

Q ss_pred             hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCC-EEEcCCCCCccHHHHHHHHc
Q 018072          188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHDRPIQEVIAEMT  262 (361)
Q Consensus       188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~-~vv~~~~~~~~~~~~i~~~~  262 (361)
                      .....++++++||-+|+|. |..+..+++..+..+|+++|.+++.++.+++    .|.. .++...+..    +   .+.
T Consensus        18 ~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~----~---~~~   89 (178)
T 3hm2_A           18 ISALAPKPHETLWDIGGGS-GSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAP----R---AFD   89 (178)
T ss_dssp             HHHHCCCTTEEEEEESTTT-THHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTT----G---GGG
T ss_pred             HHHhcccCCCeEEEeCCCC-CHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchH----h---hhh
Confidence            4456788999999999986 8888899888754599999999998888764    4554 232112211    1   122


Q ss_pred             C--CCccEEEEccCC--hHHHHHHHHHhcCCCcEEEEEcC
Q 018072          263 N--GGVDRSVECTGN--IDNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       263 ~--~g~Dvvid~~g~--~~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      .  +.||+|+.....  ...+..+.+.|+++ |++++...
T Consensus        90 ~~~~~~D~i~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~  128 (178)
T 3hm2_A           90 DVPDNPDVIFIGGGLTAPGVFAAAWKRLPVG-GRLVANAV  128 (178)
T ss_dssp             GCCSCCSEEEECC-TTCTTHHHHHHHTCCTT-CEEEEEEC
T ss_pred             ccCCCCCEEEECCcccHHHHHHHHHHhcCCC-CEEEEEee
Confidence            2  479999976543  34788999999998 99987754

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=97.17  E-value=0.0019  Score=56.98  Aligned_cols=80  Identities=20%  Similarity=0.206  Sum_probs=53.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCCEE-EcCCCCC-ccHHHHHHHHcC--CCccE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDF-VNTSEHD-RPIQEVIAEMTN--GGVDR  268 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~~~v-v~~~~~~-~~~~~~i~~~~~--~g~Dv  268 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+. +++.... +..+-.+ .++.+.+.....  +.+|+
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   83 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4678999988 9999999998888898 8999999988776543 3454322 2222222 123333333221  36899


Q ss_pred             EEEccCC
Q 018072          269 SVECTGN  275 (361)
Q Consensus       269 vid~~g~  275 (361)
                      +|+++|.
T Consensus        84 lv~~Ag~   90 (253)
T 1hxh_A           84 LVNNAGI   90 (253)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999874

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=97.15  E-value=0.00058  Score=59.75  Aligned_cols=103  Identities=14%  Similarity=0.100  Sum_probs=71.2

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHc---
Q 018072          191 AKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT---  262 (361)
Q Consensus       191 ~~~~~g~~VlI~G~g~vG~~a~~~a~~~g-~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~---  262 (361)
                      ....++++||-+|+|. |..+..+++..+ ..+|++++.+++..+.+++    .|....+.....+  ..+.+..+.   
T Consensus        56 ~~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d--~~~~~~~~~~~~  132 (239)
T 2hnk_A           56 TKISGAKRIIEIGTFT-GYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGS--ALETLQVLIDSK  132 (239)
T ss_dssp             HHHHTCSEEEEECCTT-CHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESC--HHHHHHHHHHCS
T ss_pred             HHhhCcCEEEEEeCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECC--HHHHHHHHHhhc
Confidence            3456788999999984 888899999874 3499999999998887765    3553211122222  333333331   


Q ss_pred             -----------C-CCccEEEEccCCh---HHHHHHHHHhcCCCcEEEEEc
Q 018072          263 -----------N-GGVDRSVECTGNI---DNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       263 -----------~-~g~Dvvid~~g~~---~~~~~~~~~l~~~~G~iv~~g  297 (361)
                                 + +.||+|+.....+   ..+..+.+.|+++ |+++...
T Consensus       133 ~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~~  181 (239)
T 2hnk_A          133 SAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPG-GLLIADN  181 (239)
T ss_dssp             SCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             ccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCC-eEEEEEc
Confidence                       2 5799999876654   4568888999997 9988753

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.15  E-value=0.005  Score=48.43  Aligned_cols=78  Identities=18%  Similarity=0.243  Sum_probs=54.5

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      +.+|+|+|+|.+|...++.+...|. +|+++++++++.+.+.+ ++...+. .+..+  . +.+....-.++|+|+.+++
T Consensus         4 ~m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~~~~~-~d~~~--~-~~l~~~~~~~~d~vi~~~~   78 (140)
T 1lss_A            4 GMYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDALVIN-GDCTK--I-KTLEDAGIEDADMYIAVTG   78 (140)
T ss_dssp             -CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSEEEE-SCTTS--H-HHHHHTTTTTCSEEEECCS
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHhcCcEEEE-cCCCC--H-HHHHHcCcccCCEEEEeeC
Confidence            3579999999999999998888898 89999999988877764 5654332 22222  1 1232221237999999998


Q ss_pred             ChHH
Q 018072          275 NIDN  278 (361)
Q Consensus       275 ~~~~  278 (361)
                      ....
T Consensus        79 ~~~~   82 (140)
T 1lss_A           79 KEEV   82 (140)
T ss_dssp             CHHH
T ss_pred             CchH
Confidence            8543

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=97.15  E-value=0.0036  Score=55.75  Aligned_cols=80  Identities=23%  Similarity=0.308  Sum_probs=55.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCCCEE-EcCCCCC-ccHHHHHHHHcC--CCccE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDF-VNTSEHD-RPIQEVIAEMTN--GGVDR  268 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~-~~~G~~~v-v~~~~~~-~~~~~~i~~~~~--~g~Dv  268 (361)
                      .|.++||+|+ |++|...++.+...|+ +|+.+++++++++.+ ++++.... +..+-.+ .++.+.+.....  +++|+
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGA-IVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDI  104 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence            4688999987 9999999999989999 899999998887665 44665432 2222222 123333333222  37999


Q ss_pred             EEEccCC
Q 018072          269 SVECTGN  275 (361)
Q Consensus       269 vid~~g~  275 (361)
                      +|+++|.
T Consensus       105 lvnnAg~  111 (266)
T 3grp_A          105 LVNNAGI  111 (266)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999984

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=97.12  E-value=0.0028  Score=57.53  Aligned_cols=80  Identities=26%  Similarity=0.292  Sum_probs=54.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHD-RPIQEVIAEMTN--GG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g  265 (361)
                      .|.++||+|+ |++|...++.+...|+ +|+++++++++++.+.    +.+... .+..+-.+ ..+.+.+.....  ++
T Consensus        30 ~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  108 (301)
T 3tjr_A           30 DGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGG  108 (301)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            5789999998 9999999998889998 8999999988776543    234432 22222222 223333333222  37


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++|+++|.
T Consensus       109 id~lvnnAg~  118 (301)
T 3tjr_A          109 VDVVFSNAGI  118 (301)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999883

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=97.12  E-value=0.003  Score=56.48  Aligned_cols=79  Identities=23%  Similarity=0.355  Sum_probs=51.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCC-CE--EEcCCCCC-ccHHHHHHHHcC--
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGV-TD--FVNTSEHD-RPIQEVIAEMTN--  263 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~-~~--vv~~~~~~-~~~~~~i~~~~~--  263 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.    +.|. ..  .+..+-.+ ..+.+.+.....  
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  109 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH  109 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence            4678999988 9999999998888998 8999999987765542    2342 11  22222222 123333332221  


Q ss_pred             CCccEEEEccC
Q 018072          264 GGVDRSVECTG  274 (361)
Q Consensus       264 ~g~Dvvid~~g  274 (361)
                      +++|++|+++|
T Consensus       110 g~iD~vi~~Ag  120 (279)
T 1xg5_A          110 SGVDICINNAG  120 (279)
T ss_dssp             CCCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            36999999987

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=97.12  E-value=0.0028  Score=54.87  Aligned_cols=105  Identities=15%  Similarity=0.142  Sum_probs=71.1

Q ss_pred             hhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHH----cCCC-EEEcCCCCCccHHHHHHHHc
Q 018072          189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHDRPIQEVIAEMT  262 (361)
Q Consensus       189 ~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g-~~~Vi~~~~~~~~~~~~~~----~G~~-~vv~~~~~~~~~~~~i~~~~  262 (361)
                      ...+.+++.+||=+|+|. |..++.+|+..+ ..+|+++|.+++..+.+++    .|.. .-+.....+  ..+.+..+.
T Consensus        50 ~~~~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gd--a~~~l~~~~  126 (221)
T 3dr5_A           50 ATTNGNGSTGAIAITPAA-GLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSR--PLDVMSRLA  126 (221)
T ss_dssp             HHSCCTTCCEEEEESTTH-HHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSC--HHHHGGGSC
T ss_pred             HhhCCCCCCCEEEEcCCc-hHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcC--HHHHHHHhc
Confidence            344556677999999876 888888998863 2399999999998877754    4554 212222222  333333333


Q ss_pred             CCCccEEEEccCCh---HHHHHHHHHhcCCCcEEEEEc
Q 018072          263 NGGVDRSVECTGNI---DNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       263 ~~g~Dvvid~~g~~---~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      ++.||+||-.....   ..++.+.+.|+++ |.++.-.
T Consensus       127 ~~~fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~dn  163 (221)
T 3dr5_A          127 NDSYQLVFGQVSPMDLKALVDAAWPLLRRG-GALVLAD  163 (221)
T ss_dssp             TTCEEEEEECCCTTTHHHHHHHHHHHEEEE-EEEEETT
T ss_pred             CCCcCeEEEcCcHHHHHHHHHHHHHHcCCC-cEEEEeC
Confidence            45899999765432   3577889999997 9987743

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=97.12  E-value=0.0022  Score=58.83  Aligned_cols=79  Identities=18%  Similarity=0.151  Sum_probs=53.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCC--C-EEEcCCCCC-ccHHHHHHHHc--C
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGV--T-DFVNTSEHD-RPIQEVIAEMT--N  263 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~--~-~vv~~~~~~-~~~~~~i~~~~--~  263 (361)
                      .+.+|||+|+ |++|...++.+...|+ +|+++++++++.+.+.+    .+.  . .++..+-.+ ..+.+.+....  .
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   85 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF   85 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence            4679999998 9999999998888999 89999999887665432    332  2 222222222 22333443332  1


Q ss_pred             CCccEEEEccC
Q 018072          264 GGVDRSVECTG  274 (361)
Q Consensus       264 ~g~Dvvid~~g  274 (361)
                      +++|++|+++|
T Consensus        86 g~id~lv~nAg   96 (319)
T 3ioy_A           86 GPVSILCNNAG   96 (319)
T ss_dssp             CCEEEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            37999999998

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=97.12  E-value=0.0046  Score=53.54  Aligned_cols=78  Identities=19%  Similarity=0.213  Sum_probs=52.2

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCEEEcCCCCC-ccHHHHHHHHcC--CCccEEE
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHD-RPIQEVIAEMTN--GGVDRSV  270 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~vv~~~~~~-~~~~~~i~~~~~--~g~Dvvi  270 (361)
                      +.++||+|+ |++|...++.+...|+ +|+++++++++++.+.+ ++-...+..+-.+ .++.+.+.....  +++|++|
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li   83 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGY-RVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALV   83 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            568999987 9999999998888998 89999999887765543 4322333222222 123333333221  3689999


Q ss_pred             EccC
Q 018072          271 ECTG  274 (361)
Q Consensus       271 d~~g  274 (361)
                      +++|
T Consensus        84 ~~Ag   87 (234)
T 2ehd_A           84 NNAG   87 (234)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9987

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=97.11  E-value=0.0012  Score=60.28  Aligned_cols=103  Identities=16%  Similarity=0.187  Sum_probs=72.6

Q ss_pred             hhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc----CCCEEEcCCCCCccHHHHHHHHc
Q 018072          187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMT  262 (361)
Q Consensus       187 ~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~----G~~~vv~~~~~~~~~~~~i~~~~  262 (361)
                      +.+...++++++||-+|+|. |..+..+++..|. +|+++|.+++.++.+++.    |....+.....+  +    ..+ 
T Consensus        82 ~~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d--~----~~~-  152 (318)
T 2fk8_A           82 NLDKLDLKPGMTLLDIGCGW-GTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQG--W----EDF-  152 (318)
T ss_dssp             HHTTSCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESC--G----GGC-
T ss_pred             HHHhcCCCCcCEEEEEcccc-hHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECC--h----HHC-
Confidence            35566789999999999987 8888888888788 999999999988888663    432111111111  1    111 


Q ss_pred             CCCccEEEEc-----cCC---hHHHHHHHHHhcCCCcEEEEEcCC
Q 018072          263 NGGVDRSVEC-----TGN---IDNMISAFECVHDGWGVAVLVGVP  299 (361)
Q Consensus       263 ~~g~Dvvid~-----~g~---~~~~~~~~~~l~~~~G~iv~~g~~  299 (361)
                      ++.||+|+..     .+.   ...+..+.+.|+++ |++++....
T Consensus       153 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~~  196 (318)
T 2fk8_A          153 AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPAD-GRMTVQSSV  196 (318)
T ss_dssp             CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTT-CEEEEEEEE
T ss_pred             CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCC-cEEEEEEec
Confidence            2579999976     332   34677888999997 998876543

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.11  E-value=0.0033  Score=55.86  Aligned_cols=80  Identities=25%  Similarity=0.366  Sum_probs=53.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCE-EEcCCCCC-ccHHHHHHHHcC--CCccE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD-FVNTSEHD-RPIQEVIAEMTN--GGVDR  268 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g~Dv  268 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++++.+.+ ++... .+..+-.+ .++.+.+.....  +.+|+
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~   83 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG   83 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            4678999988 9999999998888998 89999999888766543 43222 22222222 123333333221  36899


Q ss_pred             EEEccCC
Q 018072          269 SVECTGN  275 (361)
Q Consensus       269 vid~~g~  275 (361)
                      +|+++|.
T Consensus        84 lvnnAg~   90 (263)
T 2a4k_A           84 VAHFAGV   90 (263)
T ss_dssp             EEEGGGG
T ss_pred             EEECCCC
Confidence            9999873

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=97.11  E-value=0.0005  Score=58.91  Aligned_cols=103  Identities=19%  Similarity=0.223  Sum_probs=72.0

Q ss_pred             hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHc
Q 018072          188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT  262 (361)
Q Consensus       188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~  262 (361)
                      .+...++++++||.+|+|. |..+..+++..+. .+|++++.+++.++.+++    .|...+. ....+  ...   .+.
T Consensus        70 ~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~-~~~~d--~~~---~~~  142 (215)
T 2yxe_A           70 CELLDLKPGMKVLEIGTGC-GYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVI-VIVGD--GTL---GYE  142 (215)
T ss_dssp             HHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEE-EEESC--GGG---CCG
T ss_pred             HHhhCCCCCCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeE-EEECC--ccc---CCC
Confidence            4556788999999999984 8889999988862 399999999998888765    3433211 11111  100   011


Q ss_pred             -CCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcC
Q 018072          263 -NGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       263 -~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                       .+.||+|+....-......+.+.|+++ |++++.-.
T Consensus       143 ~~~~fD~v~~~~~~~~~~~~~~~~L~pg-G~lv~~~~  178 (215)
T 2yxe_A          143 PLAPYDRIYTTAAGPKIPEPLIRQLKDG-GKLLMPVG  178 (215)
T ss_dssp             GGCCEEEEEESSBBSSCCHHHHHTEEEE-EEEEEEES
T ss_pred             CCCCeeEEEECCchHHHHHHHHHHcCCC-cEEEEEEC
Confidence             237999998876555667888999997 99877643

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=97.10  E-value=0.0033  Score=56.34  Aligned_cols=103  Identities=22%  Similarity=0.261  Sum_probs=64.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhh-HH----HHHHcCCCEE-EcCCCCC-ccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-FE----EAKKFGVTDF-VNTSEHD-RPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~-~~----~~~~~G~~~v-v~~~~~~-~~~~~~i~~~~~--~  264 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++ .+    .+++.|.... +..+-.+ .++.+.+.....  +
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  106 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG  106 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4678999988 9999999999888999 89888887653 22    2344454432 2222222 123333333221  3


Q ss_pred             CccEEEEccCCh----------H---------------HHHHHHHHhcCCCcEEEEEcCC
Q 018072          265 GVDRSVECTGNI----------D---------------NMISAFECVHDGWGVAVLVGVP  299 (361)
Q Consensus       265 g~Dvvid~~g~~----------~---------------~~~~~~~~l~~~~G~iv~~g~~  299 (361)
                      ++|++|+++|..          +               ..+.+.+.|+.. |+++.++..
T Consensus       107 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS~  165 (283)
T 1g0o_A          107 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG-GRLILMGSI  165 (283)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT-CEEEEECCG
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcC-CeEEEEech
Confidence            799999998741          1               123455566566 999999764

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=97.09  E-value=0.007  Score=51.56  Aligned_cols=92  Identities=12%  Similarity=0.227  Sum_probs=63.3

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEE-EcCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 018072          198 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  275 (361)
Q Consensus       198 ~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~v-v~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~  275 (361)
                      +|||+|+ |.+|...++.+...|. +|+++++++++.+.+. .++..+ .|..+.+  .    ..+  +++|+||+++|.
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~-~~~~~~~~D~~d~~--~----~~~--~~~d~vi~~ag~   71 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGH-EVTAIVRNAGKITQTH-KDINILQKDIFDLT--L----SDL--SDQNVVVDAYGI   71 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCSHHHHHHC-SSSEEEECCGGGCC--H----HHH--TTCSEEEECCCS
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCC-EEEEEEcCchhhhhcc-CCCeEEeccccChh--h----hhh--cCCCEEEECCcC
Confidence            6999998 9999999999999998 9999999988877654 333322 2222222  2    222  368999999986


Q ss_pred             h--------HHHHHHHHHhcCC-CcEEEEEcCC
Q 018072          276 I--------DNMISAFECVHDG-WGVAVLVGVP  299 (361)
Q Consensus       276 ~--------~~~~~~~~~l~~~-~G~iv~~g~~  299 (361)
                      .        ......++.++.. .++++.++..
T Consensus        72 ~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~  104 (221)
T 3ew7_A           72 SPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGA  104 (221)
T ss_dssp             STTTTTSHHHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred             CccccchHHHHHHHHHHHHHhcCCceEEEEecc
Confidence            3        2334566666653 2688888754

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=97.08  E-value=0.0038  Score=53.60  Aligned_cols=99  Identities=10%  Similarity=0.073  Sum_probs=63.7

Q ss_pred             CEEEEEcC-CHHHHHHHHHHH-HcCCCeEEEEcCChh-hHHHHHHcCCC-EEEcCCCCCccHHHHHHHHcCCCccEEEEc
Q 018072          197 SSVAVFGL-GAVGLAAAEGAR-IAGASRIIGVDRSSK-RFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  272 (361)
Q Consensus       197 ~~VlI~G~-g~vG~~a~~~a~-~~g~~~Vi~~~~~~~-~~~~~~~~G~~-~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~  272 (361)
                      .+|||+|+ |.+|...++.+. ..|+ +|++++++++ +.+.+...+.. .++..+-.+   .+.+..... ++|++|++
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d---~~~~~~~~~-~~d~vv~~   80 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDM-HITLYGRQLKTRIPPEIIDHERVTVIEGSFQN---PGXLEQAVT-NAEVVFVG   80 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCC-EEEEEESSHHHHSCHHHHTSTTEEEEECCTTC---HHHHHHHHT-TCSEEEES
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecCccccchhhccCCCceEEEECCCCC---HHHHHHHHc-CCCEEEEc
Confidence            46999997 999999888777 8898 9999999988 76665433332 222222222   123333332 68999999


Q ss_pred             cCChHH-HHHHHHHhcCC-CcEEEEEcCCC
Q 018072          273 TGNIDN-MISAFECVHDG-WGVAVLVGVPS  300 (361)
Q Consensus       273 ~g~~~~-~~~~~~~l~~~-~G~iv~~g~~~  300 (361)
                      +|.... ...+++.++.. .++++.++...
T Consensus        81 ag~~n~~~~~~~~~~~~~~~~~iv~iSs~~  110 (221)
T 3r6d_A           81 AMESGSDMASIVKALSRXNIRRVIGVSMAG  110 (221)
T ss_dssp             CCCCHHHHHHHHHHHHHTTCCEEEEEEETT
T ss_pred             CCCCChhHHHHHHHHHhcCCCeEEEEeece
Confidence            986321 34455555443 15888887544

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=97.08  E-value=0.0045  Score=53.01  Aligned_cols=92  Identities=22%  Similarity=0.245  Sum_probs=63.3

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEE-cCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 018072          198 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV-NTSEHDRPIQEVIAEMTNGGVDRSVECTGN  275 (361)
Q Consensus       198 ~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv-~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~  275 (361)
                      +|||+|+ |.+|...++.+...|. +|+++++++++.+.+...++..+. |..+.+  .    ..+  +++|+||+++|.
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~--~----~~~--~~~d~vi~~ag~   72 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGH-EVLAVVRDPQKAADRLGATVATLVKEPLVLT--E----ADL--DSVDAVVDALSV   72 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHTCTTSEEEECCGGGCC--H----HHH--TTCSEEEECCCC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCC-EEEEEEecccccccccCCCceEEeccccccc--H----hhc--ccCCEEEECCcc
Confidence            5899998 9999999999988898 999999999887766444543322 222222  2    222  368999999986


Q ss_pred             h----------HHHHHHHHHhcCCCcEEEEEcC
Q 018072          276 I----------DNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       276 ~----------~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      .          ......++.++..+++++.++.
T Consensus        73 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS  105 (224)
T 3h2s_A           73 PWGSGRGYLHLDFATHLVSLLRNSDTLAVFILG  105 (224)
T ss_dssp             CTTSSCTHHHHHHHHHHHHTCTTCCCEEEEECC
T ss_pred             CCCcchhhHHHHHHHHHHHHHHHcCCcEEEEec
Confidence            2          1234555556554368888854

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=97.08  E-value=0.0045  Score=54.71  Aligned_cols=80  Identities=26%  Similarity=0.294  Sum_probs=54.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCCE-EEcCCCCC-ccHHHHHHHHcC--CCccE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD-FVNTSEHD-RPIQEVIAEMTN--GGVDR  268 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g~Dv  268 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+. +++... .+..+-.+ .++.+.+.....  +++|+
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   85 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGA-TVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDI   85 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4689999987 9999999998888999 8999999988776653 455432 22222222 123333333221  37999


Q ss_pred             EEEccCC
Q 018072          269 SVECTGN  275 (361)
Q Consensus       269 vid~~g~  275 (361)
                      +|+++|.
T Consensus        86 lv~~Ag~   92 (259)
T 4e6p_A           86 LVNNAAL   92 (259)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9999884

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=97.07  E-value=0.0027  Score=56.81  Aligned_cols=81  Identities=22%  Similarity=0.231  Sum_probs=53.7

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCC-EEEcCCCCC-ccHHHHHHHHcC--CCcc
Q 018072          194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVT-DFVNTSEHD-RPIQEVIAEMTN--GGVD  267 (361)
Q Consensus       194 ~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~~-~vv~~~~~~-~~~~~~i~~~~~--~g~D  267 (361)
                      ..+.++||+|+ |++|...++.+...|+ +|+.+++++++++.+. +++.. ..+..+-.+ .++.+.+.....  +++|
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  104 (272)
T 4dyv_A           26 TGKKIAIVTGAGSGVGRAVAVALAGAGY-GVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVD  104 (272)
T ss_dssp             --CCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            35678999988 8999999998888999 8999999988876654 35432 222222222 123333333222  3799


Q ss_pred             EEEEccCC
Q 018072          268 RSVECTGN  275 (361)
Q Consensus       268 vvid~~g~  275 (361)
                      ++|+++|.
T Consensus       105 ~lVnnAg~  112 (272)
T 4dyv_A          105 VLFNNAGT  112 (272)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999874

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.07  E-value=0.0026  Score=56.20  Aligned_cols=89  Identities=21%  Similarity=0.270  Sum_probs=57.7

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh-------------------hhHHHHH----HcCCC-EEEcCC-CC
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS-------------------KRFEEAK----KFGVT-DFVNTS-EH  250 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~-------------------~~~~~~~----~~G~~-~vv~~~-~~  250 (361)
                      +.+|+|+|+|++|..+++.+...|..+++.+|.+.                   .|.+.+.    ++... .+..+. .-
T Consensus        31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~  110 (249)
T 1jw9_B           31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL  110 (249)
T ss_dssp             HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred             CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccC
Confidence            46899999999999999999999988999999987                   5655543    33332 222111 11


Q ss_pred             CccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcC
Q 018072          251 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHD  288 (361)
Q Consensus       251 ~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~  288 (361)
                      +  . +.+.++. .++|+||+++.+.+.-....+....
T Consensus       111 ~--~-~~~~~~~-~~~DvVi~~~d~~~~~~~l~~~~~~  144 (249)
T 1jw9_B          111 D--D-AELAALI-AEHDLVLDCTDNVAVRNQLNAGCFA  144 (249)
T ss_dssp             C--H-HHHHHHH-HTSSEEEECCSSHHHHHHHHHHHHH
T ss_pred             C--H-hHHHHHH-hCCCEEEEeCCCHHHHHHHHHHHHH
Confidence            1  1 1222222 2689999999987654444444433

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.07  E-value=0.0023  Score=56.20  Aligned_cols=79  Identities=25%  Similarity=0.315  Sum_probs=53.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCCEEEcCCCCC-ccHHHHHHHHcC--CCccEE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDFVNTSEHD-RPIQEVIAEMTN--GGVDRS  269 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~~~vv~~~~~~-~~~~~~i~~~~~--~g~Dvv  269 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+. ++|+ ..+..+-.+ .++.+.+.....  +++|++
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   81 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGA-HPVVMDVADPASVERGFAEALAHLGRLDGV   81 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTC-EEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCC-EEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            3678999988 9999999998888998 8999999988776654 3563 222222222 123333333221  369999


Q ss_pred             EEccCC
Q 018072          270 VECTGN  275 (361)
Q Consensus       270 id~~g~  275 (361)
                      |+++|.
T Consensus        82 vn~Ag~   87 (245)
T 1uls_A           82 VHYAGI   87 (245)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999883

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.06  E-value=0.0026  Score=57.66  Aligned_cols=79  Identities=29%  Similarity=0.376  Sum_probs=52.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCC---C-EEEcCCCCC-ccHHHHHHHHcC-
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGV---T-DFVNTSEHD-RPIQEVIAEMTN-  263 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~---~-~vv~~~~~~-~~~~~~i~~~~~-  263 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++++.+.    +.+.   . ..+..+-.+ ..+.+.+..... 
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  103 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK  103 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence            4678999987 9999999998888999 8999999988765542    2333   2 222222222 123333332221 


Q ss_pred             -CCccEEEEccC
Q 018072          264 -GGVDRSVECTG  274 (361)
Q Consensus       264 -~g~Dvvid~~g  274 (361)
                       +++|++|+++|
T Consensus       104 ~g~iD~lvnnAG  115 (297)
T 1xhl_A          104 FGKIDILVNNAG  115 (297)
T ss_dssp             HSCCCEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence             37999999987

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=97.06  E-value=0.003  Score=58.43  Aligned_cols=132  Identities=15%  Similarity=0.197  Sum_probs=83.7

Q ss_pred             CEEEEEcCCHHHHHHHHHHH-Hc-CCCeEEEEcCChhhHHH-HHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072          197 SSVAVFGLGAVGLAAAEGAR-IA-GASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  273 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~-~~-g~~~Vi~~~~~~~~~~~-~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~  273 (361)
                      -+|.|+|+|.+|...++.++ .. +.+.+.+.++++++.+. ++++|...++.    +  +.+.+   .+.++|+|+.++
T Consensus         9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~----~--~~~~l---~~~~~D~V~i~t   79 (346)
T 3cea_A            9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYT----N--YKDMI---DTENIDAIFIVA   79 (346)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEES----C--HHHHH---TTSCCSEEEECS
T ss_pred             ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccC----C--HHHHh---cCCCCCEEEEeC
Confidence            47999999999998888776 43 55334567888888765 45578754442    1  33332   123799999999


Q ss_pred             CChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecCh-hhh---c--c-ccEEEEeeecCCCcCCcHHHHHHHHHcCCc
Q 018072          274 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INV---L--N-ERTLKGTFFGNYKPRTDLPSVVDMYMNKVI  344 (361)
Q Consensus       274 g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~---~--~-~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l  344 (361)
                      +.....+.+.++|+.  |+-+++..+-   ..+... ..+   .  + ++.+.-.+..++  ...+..+.+++++|++
T Consensus        80 p~~~h~~~~~~al~~--G~~v~~eKp~---~~~~~~~~~l~~~a~~~~~~~~~~~~~~r~--~p~~~~~~~~i~~g~i  150 (346)
T 3cea_A           80 PTPFHPEMTIYAMNA--GLNVFCEKPL---GLDFNEVDEMAKVIKSHPNQIFQSGFMRRY--DDSYRYAKKIVDNGDI  150 (346)
T ss_dssp             CGGGHHHHHHHHHHT--TCEEEECSCC---CSCHHHHHHHHHHHHTCTTSCEECCCGGGT--CHHHHHHHHHHHTTTT
T ss_pred             ChHhHHHHHHHHHHC--CCEEEEcCCC---CCCHHHHHHHHHHHHhCCCCeEEEeccccc--CHHHHHHHHHHHcCCC
Confidence            987778888888876  6666664322   111111 111   1  4 555543332222  3468889999998876

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=97.06  E-value=0.0021  Score=59.66  Aligned_cols=98  Identities=27%  Similarity=0.283  Sum_probs=65.2

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEE------------cCCCCCccH-HHHHHH
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV------------NTSEHDRPI-QEVIAE  260 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv------------~~~~~~~~~-~~~i~~  260 (361)
                      -.|++|.|.|.|.+|+.+++.++.+|+ +|++.|.++++.++++++|++.+-            ........+ .+.+..
T Consensus       173 L~GktV~I~G~GnVG~~~A~~l~~~Ga-kVvvsD~~~~~~~~a~~~ga~~v~~~ell~~~~DIliP~A~~~~I~~~~~~~  251 (355)
T 1c1d_A          173 LDGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHTAVALEDVLSTPCDVFAPCAMGGVITTEVART  251 (355)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEECCGGGGGGCCCSEEEECSCSCCBCHHHHHH
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHhcCCEEeChHHhhcCccceecHhHHHhhcCHHHHhh
Confidence            478999999999999999999999999 899999998876677777764321            000000001 111111


Q ss_pred             HcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEE
Q 018072          261 MTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       261 ~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~  296 (361)
                      +   +.++|++++..+-+.+.+.+.|..+ |.++.-
T Consensus       252 l---k~~iVie~AN~p~t~~eA~~~L~~~-gIlv~P  283 (355)
T 1c1d_A          252 L---DCSVVAGAANNVIADEAASDILHAR-GILYAP  283 (355)
T ss_dssp             C---CCSEECCSCTTCBCSHHHHHHHHHT-TCEECC
T ss_pred             C---CCCEEEECCCCCCCCHHHHHHHHhC-CEEEEC
Confidence            1   4678888777654444667777776 766544

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=97.05  E-value=0.0049  Score=55.68  Aligned_cols=105  Identities=20%  Similarity=0.220  Sum_probs=66.6

Q ss_pred             CCCCEEEEEcC-CH--HHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCEEEcCCCCC-ccHHHHHHHHcC--
Q 018072          194 ERGSSVAVFGL-GA--VGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHD-RPIQEVIAEMTN--  263 (361)
Q Consensus       194 ~~g~~VlI~G~-g~--vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~vv~~~~~~-~~~~~~i~~~~~--  263 (361)
                      -.|.++||+|+ |.  +|.+.++.+...|+ +|+.++++++..+.++    +.+....+..+-.+ ..+.+.+.....  
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  107 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKW  107 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence            35789999987 66  99999998888999 8999988865443332    33433333222222 123333333321  


Q ss_pred             CCccEEEEccCChH-----------------------------HHHHHHHHhcCCCcEEEEEcCCC
Q 018072          264 GGVDRSVECTGNID-----------------------------NMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       264 ~g~Dvvid~~g~~~-----------------------------~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      +++|++|+++|...                             ....+++.+.+. |+++.++...
T Consensus       108 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~-g~Iv~isS~~  172 (293)
T 3grk_A          108 GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADG-GSILTLTYYG  172 (293)
T ss_dssp             SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTC-EEEEEEECGG
T ss_pred             CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCC-CEEEEEeehh
Confidence            37999999988421                             123455566776 9999987543

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=97.05  E-value=0.0029  Score=56.72  Aligned_cols=80  Identities=25%  Similarity=0.365  Sum_probs=54.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCCE-EEcCCCCC-ccHHHHHHHHcC--CCccE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD-FVNTSEHD-RPIQEVIAEMTN--GGVDR  268 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g~Dv  268 (361)
                      .|.++||+|+ |++|...++.+...|+ +|+++++++++.+.+. +++... .+..+-.+ .++.+.+.....  +++|+
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  106 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGC-HVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDK  106 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4678999987 8999999998888999 9999999988776653 455432 22222222 123333333222  37999


Q ss_pred             EEEccCC
Q 018072          269 SVECTGN  275 (361)
Q Consensus       269 vid~~g~  275 (361)
                      +++++|.
T Consensus       107 lvnnAg~  113 (277)
T 3gvc_A          107 LVANAGV  113 (277)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999884

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=97.04  E-value=0.0038  Score=54.59  Aligned_cols=80  Identities=24%  Similarity=0.273  Sum_probs=52.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcC---CCEEEcCCCCC-ccHHHHHHHHcC--CCc
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFG---VTDFVNTSEHD-RPIQEVIAEMTN--GGV  266 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G---~~~vv~~~~~~-~~~~~~i~~~~~--~g~  266 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+. ++.   --..+..+-.+ ..+.+.+.....  +.+
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV   83 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4678999988 9999999998888998 8999999987766543 232   11222222222 123333333221  368


Q ss_pred             cEEEEccCC
Q 018072          267 DRSVECTGN  275 (361)
Q Consensus       267 Dvvid~~g~  275 (361)
                      |++|+++|.
T Consensus        84 d~li~~Ag~   92 (251)
T 1zk4_A           84 STLVNNAGI   92 (251)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999873

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=97.03  E-value=0.0056  Score=54.42  Aligned_cols=80  Identities=16%  Similarity=0.259  Sum_probs=52.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCC--C-EEEcCCCCC-ccHHHHHHHHcC--CCc
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGV--T-DFVNTSEHD-RPIQEVIAEMTN--GGV  266 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~-~~~G~--~-~vv~~~~~~-~~~~~~i~~~~~--~g~  266 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+ ++++.  . ..+..+-.+ ..+.+.+.....  +++
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   93 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL   93 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999988 9999999998888898 899999988765544 33432  1 222222222 123333332221  369


Q ss_pred             cEEEEccCC
Q 018072          267 DRSVECTGN  275 (361)
Q Consensus       267 Dvvid~~g~  275 (361)
                      |++|+++|.
T Consensus        94 d~li~~Ag~  102 (278)
T 2bgk_A           94 DIMFGNVGV  102 (278)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCcc
Confidence            999999873

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=97.03  E-value=0.007  Score=53.54  Aligned_cols=80  Identities=20%  Similarity=0.229  Sum_probs=53.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHD-RPIQEVIAEMTN--GG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g  265 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++++.+.    +.+... .+..+-.+ .++.+.+.....  +.
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  106 (262)
T 3rkr_A           28 SGQVAVVTGASRGIGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGR  106 (262)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            5689999987 9999999998888899 8999999988766543    234432 22222222 123333333221  36


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++|+++|.
T Consensus       107 id~lv~~Ag~  116 (262)
T 3rkr_A          107 CDVLVNNAGV  116 (262)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999885

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=97.02  E-value=0.0048  Score=54.61  Aligned_cols=80  Identities=23%  Similarity=0.290  Sum_probs=52.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHD-RPIQEVIAEMTN--GG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g  265 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++++.+.    +.|... .+..+-.+ .++.+.+.....  ++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   84 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK   84 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            4678999988 9999999999989998 8999999987765543    234432 22222222 123333333221  37


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++|+++|.
T Consensus        85 id~lv~nAg~   94 (262)
T 1zem_A           85 IDFLFNNAGY   94 (262)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=97.02  E-value=0.0022  Score=56.60  Aligned_cols=78  Identities=18%  Similarity=0.135  Sum_probs=55.1

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEE-EcCCCCC-ccHHHHHHHHcC--CCccEEEE
Q 018072          197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHD-RPIQEVIAEMTN--GGVDRSVE  271 (361)
Q Consensus       197 ~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~v-v~~~~~~-~~~~~~i~~~~~--~g~Dvvid  271 (361)
                      .+|||+|+ +++|.+.++.+...|+ +|+.+++++++++.+.+-+.... +.-+-.+ .++.+.+.....  +++|++++
T Consensus         3 K~vlVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVN   81 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFLEAGD-KVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVN   81 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            68999987 8999999999999999 99999999998888776554432 2222222 223333333222  37999999


Q ss_pred             ccCC
Q 018072          272 CTGN  275 (361)
Q Consensus       272 ~~g~  275 (361)
                      ++|.
T Consensus        82 NAG~   85 (247)
T 3ged_A           82 NACR   85 (247)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9873

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=97.01  E-value=0.001  Score=56.54  Aligned_cols=132  Identities=17%  Similarity=0.212  Sum_probs=78.6

Q ss_pred             cceeeEE-EeccceEECCCCCChhhhhccccchhhhhhhhhhhc--CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEE
Q 018072          149 TFSEYTV-VHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA--KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIG  225 (361)
Q Consensus       149 ~~ae~v~-v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~--~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~  225 (361)
                      .|.+|.. .+....+.+++.+.+..+.. +    +.- .+.+..  .++++++||-+|+|. |..+..+++ .+..+|++
T Consensus        17 ~w~~~~~~~~~~~~~~~~~~~~f~~~~~-~----~~~-~~~~~l~~~~~~~~~vLDiG~G~-G~~~~~l~~-~~~~~v~~   88 (205)
T 3grz_A           17 EWEDYQPVFKDQEIIRLDPGLAFGTGNH-Q----TTQ-LAMLGIERAMVKPLTVADVGTGS-GILAIAAHK-LGAKSVLA   88 (205)
T ss_dssp             TTCCCCCSSTTCEEEEESCC-----CCH-H----HHH-HHHHHHHHHCSSCCEEEEETCTT-SHHHHHHHH-TTCSEEEE
T ss_pred             cccccccCCCCceeEEecCCcccCCCCC-c----cHH-HHHHHHHHhccCCCEEEEECCCC-CHHHHHHHH-CCCCEEEE
Confidence            4677766 56677788887765544321 1    111 111111  257889999999976 777777666 45569999


Q ss_pred             EcCChhhHHHHHH----cCCCE--EEcCCCCCccHHHHHHHHcCCCccEEEEccCChH---HHHHHHHHhcCCCcEEEEE
Q 018072          226 VDRSSKRFEEAKK----FGVTD--FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID---NMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       226 ~~~~~~~~~~~~~----~G~~~--vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~---~~~~~~~~l~~~~G~iv~~  296 (361)
                      +|.+++.++.+++    .+...  ++..+..+         ..++.+|+|+....-..   .+..+.+.|+++ |++++.
T Consensus        89 vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~---------~~~~~fD~i~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~  158 (205)
T 3grz_A           89 TDISDESMTAAEENAALNGIYDIALQKTSLLA---------DVDGKFDLIVANILAEILLDLIPQLDSHLNED-GQVIFS  158 (205)
T ss_dssp             EESCHHHHHHHHHHHHHTTCCCCEEEESSTTT---------TCCSCEEEEEEESCHHHHHHHGGGSGGGEEEE-EEEEEE
T ss_pred             EECCHHHHHHHHHHHHHcCCCceEEEeccccc---------cCCCCceEEEECCcHHHHHHHHHHHHHhcCCC-CEEEEE
Confidence            9999998888765    35432  22211111         12347999998654322   245556678887 998875


Q ss_pred             cC
Q 018072          297 GV  298 (361)
Q Consensus       297 g~  298 (361)
                      ..
T Consensus       159 ~~  160 (205)
T 3grz_A          159 GI  160 (205)
T ss_dssp             EE
T ss_pred             ec
Confidence            43

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=97.00  E-value=0.0036  Score=56.17  Aligned_cols=80  Identities=19%  Similarity=0.204  Sum_probs=52.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-c---CC-C-EEEcCCCCC-ccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F---GV-T-DFVNTSEHD-RPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~---G~-~-~vv~~~~~~-~~~~~~i~~~~~--~  264 (361)
                      .|.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+.+ +   +. . ..+..+-.+ .++.+.+.....  +
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  110 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGY-SVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFA  110 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5788999987 8999999998888999 89999999887665432 2   22 2 222222222 123333333222  3


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      ++|++|+++|.
T Consensus       111 ~iD~lvnnAG~  121 (281)
T 4dry_A          111 RLDLLVNNAGS  121 (281)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            78999999874

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=97.00  E-value=0.0044  Score=56.05  Aligned_cols=80  Identities=16%  Similarity=0.224  Sum_probs=53.2

Q ss_pred             CCCEEEEEcC-C--HHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCEEEcCCCCC-ccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHD-RPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g--~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~vv~~~~~~-~~~~~~i~~~~~--~  264 (361)
                      .|.++||+|+ |  ++|...++.+...|+ +|++++++++..+.++    +.+....+..+-.+ .++.+.+.....  +
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  107 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWG  107 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4789999987 5  999999998888999 8999999876544433    34443443333222 223333333322  3


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      ++|++|+++|.
T Consensus       108 ~iD~lVnnAG~  118 (296)
T 3k31_A          108 SLDFVVHAVAF  118 (296)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999999974

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=97.00  E-value=0.0048  Score=54.73  Aligned_cols=103  Identities=19%  Similarity=0.292  Sum_probs=64.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-Hc-----CCC-EEEcCCCCC-ccHHHHHHHHcC--
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF-----GVT-DFVNTSEHD-RPIQEVIAEMTN--  263 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~-----G~~-~vv~~~~~~-~~~~~~i~~~~~--  263 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+. ++     +.. ..+..+-.+ .++.+.+.....  
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            4678999988 9999999998888998 8999999987765432 22     111 122222222 123333333221  


Q ss_pred             CCccEEEEccCCh--H---------------HHHHHHHHhcC-----CCcEEEEEcCC
Q 018072          264 GGVDRSVECTGNI--D---------------NMISAFECVHD-----GWGVAVLVGVP  299 (361)
Q Consensus       264 ~g~Dvvid~~g~~--~---------------~~~~~~~~l~~-----~~G~iv~~g~~  299 (361)
                      +++|++|+++|..  +               ....+++.+..     . |+++.++..
T Consensus        85 g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~-g~iv~isS~  141 (267)
T 2gdz_A           85 GRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEG-GIIINMSSL  141 (267)
T ss_dssp             SCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCC-EEEEEECCG
T ss_pred             CCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCC-CEEEEeCCc
Confidence            3689999999842  1               11334455543     4 899998754

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=96.99  E-value=0.0051  Score=54.75  Aligned_cols=80  Identities=18%  Similarity=0.167  Sum_probs=53.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-EEcCCCCC-ccHHHHHHHHc--CCC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHD-RPIQEVIAEMT--NGG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-vv~~~~~~-~~~~~~i~~~~--~~g  265 (361)
                      .+.++||+|+ |++|...+..+...|+ +|+++++++++.+.+.    +.+... .+..+-.+ ..+.+.+....  -++
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  108 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD  108 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence            4679999988 9999999998888998 8999999987765432    235432 22222222 12333333322  137


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++|+++|.
T Consensus       109 iD~li~~Ag~  118 (272)
T 1yb1_A          109 VSILVNNAGV  118 (272)
T ss_dssp             CSEEEECCCC
T ss_pred             CcEEEECCCc
Confidence            9999999873

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=96.98  E-value=0.0069  Score=53.38  Aligned_cols=42  Identities=21%  Similarity=0.222  Sum_probs=35.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK  237 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~  237 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~   48 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGA-TVAACDLDRAAAQETV   48 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHH
Confidence            4678999988 9999999998888898 8999999988766543

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=96.97  E-value=0.00066  Score=57.92  Aligned_cols=101  Identities=17%  Similarity=0.159  Sum_probs=70.2

Q ss_pred             hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcC
Q 018072          188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN  263 (361)
Q Consensus       188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~  263 (361)
                      .+...++++++||-+|+|. |..+..+++. +. +|+++|.+++.++.+++    +|...+. ....+  ..+..  ...
T Consensus        70 ~~~l~~~~~~~vLdiG~G~-G~~~~~la~~-~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v~-~~~~d--~~~~~--~~~  141 (210)
T 3lbf_A           70 TELLELTPQSRVLEIGTGS-GYQTAILAHL-VQ-HVCSVERIKGLQWQARRRLKNLDLHNVS-TRHGD--GWQGW--QAR  141 (210)
T ss_dssp             HHHTTCCTTCEEEEECCTT-SHHHHHHHHH-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEE-EEESC--GGGCC--GGG
T ss_pred             HHhcCCCCCCEEEEEcCCC-CHHHHHHHHh-CC-EEEEEecCHHHHHHHHHHHHHcCCCceE-EEECC--cccCC--ccC
Confidence            4566789999999999984 8888888888 55 99999999998888765    3543211 11111  10000  112


Q ss_pred             CCccEEEEccCChHHHHHHHHHhcCCCcEEEEEc
Q 018072          264 GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       264 ~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      +.||+|+....-+...+.+.+.|+++ |++++.-
T Consensus       142 ~~~D~i~~~~~~~~~~~~~~~~L~pg-G~lv~~~  174 (210)
T 3lbf_A          142 APFDAIIVTAAPPEIPTALMTQLDEG-GILVLPV  174 (210)
T ss_dssp             CCEEEEEESSBCSSCCTHHHHTEEEE-EEEEEEE
T ss_pred             CCccEEEEccchhhhhHHHHHhcccC-cEEEEEE
Confidence            47999999766555566788999997 9887653

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=96.96  E-value=0.0024  Score=57.84  Aligned_cols=104  Identities=17%  Similarity=0.207  Sum_probs=73.9

Q ss_pred             hhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHc
Q 018072          187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT  262 (361)
Q Consensus       187 ~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~  262 (361)
                      +.+...++++++||-+|+|. |..+..+++..|. +|+++|.+++.++.+++    .|...-+.....+  +.    .+ 
T Consensus        64 ~~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d--~~----~~-  134 (302)
T 3hem_A           64 ALDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQG--WE----EF-  134 (302)
T ss_dssp             HHHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECC--GG----GC-
T ss_pred             HHHHcCCCCcCEEEEeeccC-cHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECC--HH----Hc-
Confidence            45667889999999999986 8888899998886 99999999998888765    3443111111122  11    12 


Q ss_pred             CCCccEEEEccC-----C----------hHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072          263 NGGVDRSVECTG-----N----------IDNMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       263 ~~g~Dvvid~~g-----~----------~~~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      ++.||+|+....     .          ...+..+.+.|+++ |++++.....
T Consensus       135 ~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~~~  186 (302)
T 3hem_A          135 DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDD-GRMLLHTITI  186 (302)
T ss_dssp             CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTT-CEEEEEEEEC
T ss_pred             CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCC-cEEEEEEEec
Confidence            458999997421     1          25678888999998 9998876543

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=96.96  E-value=0.0029  Score=55.99  Aligned_cols=79  Identities=15%  Similarity=0.276  Sum_probs=54.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCEEE-cCCCCC-ccHHHHHHHHcC--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDFV-NTSEHD-RPIQEVIAEMTN--GG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~vv-~~~~~~-~~~~~~i~~~~~--~g  265 (361)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+    ++.|..... .-+-.+ .++.+.+.....  ++
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~   84 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSR   84 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4789999987 8999999998889999 899999999877654    345655432 222222 223333333322  37


Q ss_pred             ccEEEEccC
Q 018072          266 VDRSVECTG  274 (361)
Q Consensus       266 ~Dvvid~~g  274 (361)
                      .|++++++|
T Consensus        85 iDiLVNNAG   93 (254)
T 4fn4_A           85 IDVLCNNAG   93 (254)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCc
Confidence            999999987

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=96.96  E-value=0.0011  Score=57.32  Aligned_cols=103  Identities=14%  Similarity=0.135  Sum_probs=70.4

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcC--
Q 018072          191 AKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN--  263 (361)
Q Consensus       191 ~~~~~g~~VlI~G~g~vG~~a~~~a~~~g-~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~--  263 (361)
                      ....++.+||-+|+| .|..++.+++..+ ..+|+++|.+++..+.+++    .|...-+.....+  ..+.+..+..  
T Consensus        65 ~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d--~~~~~~~~~~~~  141 (229)
T 2avd_A           65 ARLIQAKKALDLGTF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKP--ALETLDELLAAG  141 (229)
T ss_dssp             HHHTTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESC--HHHHHHHHHHTT
T ss_pred             HHhcCCCEEEEEcCC-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcC--HHHHHHHHHhcC
Confidence            344678899999998 5888888888764 3499999999998888765    3542111222222  3344443332  


Q ss_pred             --CCccEEEEccCCh---HHHHHHHHHhcCCCcEEEEEc
Q 018072          264 --GGVDRSVECTGNI---DNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       264 --~g~Dvvid~~g~~---~~~~~~~~~l~~~~G~iv~~g  297 (361)
                        +.||+|+......   ..++.+.+.|+++ |.++...
T Consensus       142 ~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pg-G~lv~~~  179 (229)
T 2avd_A          142 EAGTFDVAVVDADKENCSAYYERCLQLLRPG-GILAVLR  179 (229)
T ss_dssp             CTTCEEEEEECSCSTTHHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             CCCCccEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEEC
Confidence              4799998765432   4678889999997 9988764

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=96.96  E-value=0.0037  Score=55.03  Aligned_cols=102  Identities=16%  Similarity=0.111  Sum_probs=72.3

Q ss_pred             hhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC----EEEcCCCCCccHHHHHHHHc
Q 018072          187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT----DFVNTSEHDRPIQEVIAEMT  262 (361)
Q Consensus       187 ~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~----~vv~~~~~~~~~~~~i~~~~  262 (361)
                      +.+...++++.+||-+|+| .|..+..+++..+. +|+++|.+++.++.+++....    .++..+-.+  .     .+.
T Consensus        47 ~~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~--~-----~~~  117 (266)
T 3ujc_A           47 ILSDIELNENSKVLDIGSG-LGGGCMYINEKYGA-HTHGIDICSNIVNMANERVSGNNKIIFEANDILT--K-----EFP  117 (266)
T ss_dssp             HTTTCCCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTT--C-----CCC
T ss_pred             HHHhcCCCCCCEEEEECCC-CCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhhcCCCeEEEECcccc--C-----CCC
Confidence            3456678899999999998 58888888887777 999999999999999876432    122111111  0     112


Q ss_pred             CCCccEEEEccC--------ChHHHHHHHHHhcCCCcEEEEEcC
Q 018072          263 NGGVDRSVECTG--------NIDNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       263 ~~g~Dvvid~~g--------~~~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      ++.||+|+..-.        ....+..+.+.|+++ |++++...
T Consensus       118 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~  160 (266)
T 3ujc_A          118 ENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPT-GTLLITDY  160 (266)
T ss_dssp             TTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             CCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCC-CEEEEEEe
Confidence            347999998532        123467888899997 99888754

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=96.95  E-value=0.0067  Score=53.57  Aligned_cols=80  Identities=20%  Similarity=0.326  Sum_probs=52.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhh-HHHHH-Hc----CCCE-EEcCCCCC-ccHHHHHHHHcC--
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-FEEAK-KF----GVTD-FVNTSEHD-RPIQEVIAEMTN--  263 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~-~~~~~-~~----G~~~-vv~~~~~~-~~~~~~i~~~~~--  263 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++ .+.+. ++    |... .+..+-.+ ..+.+.+.....  
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            3678999987 8999999998888999 89999998776 54432 22    5433 22222222 123333333222  


Q ss_pred             CCccEEEEccCC
Q 018072          264 GGVDRSVECTGN  275 (361)
Q Consensus       264 ~g~Dvvid~~g~  275 (361)
                      +++|++|+++|.
T Consensus        82 g~iD~lv~~Ag~   93 (260)
T 1x1t_A           82 GRIDILVNNAGI   93 (260)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999873

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=96.95  E-value=0.00075  Score=59.51  Aligned_cols=103  Identities=13%  Similarity=0.111  Sum_probs=70.5

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcCC-C
Q 018072          192 KPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNG-G  265 (361)
Q Consensus       192 ~~~~g~~VlI~G~g~vG~~a~~~a~~~g-~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~~-g  265 (361)
                      .+.++.+||-+|+|. |..++.+|+..+ ..+|+++|.+++.++.+++    .|...-+.....+  ..+.+..+.+. .
T Consensus        60 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d--~~~~l~~~~~~~~  136 (248)
T 3tfw_A           60 RLTQAKRILEIGTLG-GYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGP--ALQSLESLGECPA  136 (248)
T ss_dssp             HHHTCSEEEEECCTT-SHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESC--HHHHHHTCCSCCC
T ss_pred             hhcCCCEEEEecCCc-hHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC--HHHHHHhcCCCCC
Confidence            456789999999976 888888888874 3499999999998888765    3554212222222  44444444332 7


Q ss_pred             ccEEEEccCC---hHHHHHHHHHhcCCCcEEEEEcC
Q 018072          266 VDRSVECTGN---IDNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       266 ~Dvvid~~g~---~~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      ||+|+-....   +..++.+.+.|+++ |.++.-..
T Consensus       137 fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~~~~  171 (248)
T 3tfw_A          137 FDLIFIDADKPNNPHYLRWALRYSRPG-TLIIGDNV  171 (248)
T ss_dssp             CSEEEECSCGGGHHHHHHHHHHTCCTT-CEEEEECC
T ss_pred             eEEEEECCchHHHHHHHHHHHHhcCCC-eEEEEeCC
Confidence            9999954432   34678888999997 98887643

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=96.94  E-value=0.0033  Score=55.42  Aligned_cols=75  Identities=25%  Similarity=0.130  Sum_probs=51.1

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH---cCCCEEEcCCCCCccHHHHHHHHcC--CCccEEE
Q 018072          197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK---FGVTDFVNTSEHDRPIQEVIAEMTN--GGVDRSV  270 (361)
Q Consensus       197 ~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~---~G~~~vv~~~~~~~~~~~~i~~~~~--~g~Dvvi  270 (361)
                      .++||+|+ |++|...++.+...|+ +|+++++++++.+.+.+   .|.+.... +..+  +.+.+.....  +++|++|
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~-d~~~--v~~~~~~~~~~~g~iD~lv   77 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKPM-SEQE--PAELIEAVTSAYGQVDVLV   77 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEEC-CCCS--HHHHHHHHHHHHSCCCEEE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCcEEEE-CHHH--HHHHHHHHHHHhCCCCEEE
Confidence            36889987 8999999999989999 89999998877655432   34433222 2222  4444433322  3799999


Q ss_pred             EccCC
Q 018072          271 ECTGN  275 (361)
Q Consensus       271 d~~g~  275 (361)
                      +++|.
T Consensus        78 ~nAg~   82 (254)
T 1zmt_A           78 SNDIF   82 (254)
T ss_dssp             EECCC
T ss_pred             ECCCc
Confidence            99874

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=96.94  E-value=0.0036  Score=55.01  Aligned_cols=80  Identities=24%  Similarity=0.303  Sum_probs=55.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCCEEEcC-CCCC-ccHHHHHHHHcC--CCccE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDFVNT-SEHD-RPIQEVIAEMTN--GGVDR  268 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~~~vv~~-~~~~-~~~~~~i~~~~~--~g~Dv  268 (361)
                      .|.++||+|+ +++|...++.+...|+ +|+.+++++++.+.+. +++....... +-.+ .++.+.+.....  +++|+
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   83 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGA-TVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDI   83 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            4689999988 8999999999999999 8999999998776653 4555433222 2122 123333333222  37999


Q ss_pred             EEEccCC
Q 018072          269 SVECTGN  275 (361)
Q Consensus       269 vid~~g~  275 (361)
                      +++++|.
T Consensus        84 lv~nAg~   90 (247)
T 3rwb_A           84 LVNNASI   90 (247)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999983

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=96.93  E-value=0.0034  Score=55.52  Aligned_cols=80  Identities=25%  Similarity=0.349  Sum_probs=52.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-c-----CCC-EEEcCCCCC-ccHHHHHHHHcCC-
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F-----GVT-DFVNTSEHD-RPIQEVIAEMTNG-  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~-----G~~-~vv~~~~~~-~~~~~~i~~~~~~-  264 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.+ +     +.. ..+..+-.+ ..+.+.+...... 
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGA-RLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLG   84 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            4678999988 9999999998888998 89999999877655432 2     312 222222222 2233344433322 


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      ++|++|+++|.
T Consensus        85 gid~lv~~Ag~   95 (260)
T 2z1n_A           85 GADILVYSTGG   95 (260)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            49999999883

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=96.93  E-value=0.0022  Score=55.98  Aligned_cols=79  Identities=16%  Similarity=0.236  Sum_probs=53.0

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCE-EEcCCCCC-ccHHHHHHHHcC--CCccEE
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD-FVNTSEHD-RPIQEVIAEMTN--GGVDRS  269 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g~Dvv  269 (361)
                      +.++||+|+ |++|...++.+...|+ +|+.+++++++++.+.+ ++... .+..+-.+ .++.+.+.....  +++|++
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   81 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGH-QVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELV   81 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEE
Confidence            568999988 8999999998888999 89999999988776543 33221 22222222 123333333222  378999


Q ss_pred             EEccCC
Q 018072          270 VECTGN  275 (361)
Q Consensus       270 id~~g~  275 (361)
                      ++++|.
T Consensus        82 vnnAg~   87 (235)
T 3l6e_A           82 LHCAGT   87 (235)
T ss_dssp             EEECCC
T ss_pred             EECCCC
Confidence            999884

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=96.92  E-value=0.0033  Score=56.21  Aligned_cols=80  Identities=26%  Similarity=0.340  Sum_probs=53.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCCE-EEcCCCCC-ccHHHHHHHHcC--CCccE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD-FVNTSEHD-RPIQEVIAEMTN--GGVDR  268 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g~Dv  268 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+. +++... .+..+-.+ ..+.+.+.+...  +++|+
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~   82 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGD-TVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDV   82 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            4678999987 9999999998888998 8999999988776654 344332 22222222 123333333222  37999


Q ss_pred             EEEccCC
Q 018072          269 SVECTGN  275 (361)
Q Consensus       269 vid~~g~  275 (361)
                      +|+++|.
T Consensus        83 lv~~Ag~   89 (281)
T 3m1a_A           83 LVNNAGR   89 (281)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9999884

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=96.91  E-value=0.0034  Score=55.26  Aligned_cols=81  Identities=16%  Similarity=0.211  Sum_probs=53.3

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----c-C-CCEE--EcCCCCC-ccHHHHHHHHc-
Q 018072          194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----F-G-VTDF--VNTSEHD-RPIQEVIAEMT-  262 (361)
Q Consensus       194 ~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~-G-~~~v--v~~~~~~-~~~~~~i~~~~-  262 (361)
                      -.|.++||+|+ |++|...++.+...|+ +|+.+++++++++.+.+    . + -...  .|....+ ..+.+.+.... 
T Consensus        10 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (252)
T 3f1l_A           10 LNDRIILVTGASDGIGREAAMTYARYGA-TVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV   88 (252)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHH
Confidence            35789999988 8999999998888999 89999999887665432    1 2 1122  2221122 12333333322 


Q ss_pred             -CCCccEEEEccCC
Q 018072          263 -NGGVDRSVECTGN  275 (361)
Q Consensus       263 -~~g~Dvvid~~g~  275 (361)
                       .+++|++|+++|.
T Consensus        89 ~~g~id~lv~nAg~  102 (252)
T 3f1l_A           89 NYPRLDGVLHNAGL  102 (252)
T ss_dssp             HCSCCSEEEECCCC
T ss_pred             hCCCCCEEEECCcc
Confidence             2379999999884

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=96.91  E-value=0.0051  Score=55.54  Aligned_cols=81  Identities=15%  Similarity=0.181  Sum_probs=52.1

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCC-C-EE--EcCCCCCccHHHHHHHHcC-
Q 018072          194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGV-T-DF--VNTSEHDRPIQEVIAEMTN-  263 (361)
Q Consensus       194 ~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~-~-~v--v~~~~~~~~~~~~i~~~~~-  263 (361)
                      ..+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.    +.+. . ..  .|..+....+...+..+.. 
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~   88 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH   88 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence            35788999998 9999999998888899 9999999988755432    2232 2 12  2333321122333332221 


Q ss_pred             -CCccEEEEccCC
Q 018072          264 -GGVDRSVECTGN  275 (361)
Q Consensus       264 -~g~Dvvid~~g~  275 (361)
                       +++|++|+++|.
T Consensus        89 ~g~iD~lv~nAg~  101 (311)
T 3o26_A           89 FGKLDILVNNAGV  101 (311)
T ss_dssp             HSSCCEEEECCCC
T ss_pred             CCCCCEEEECCcc
Confidence             379999999984

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=96.91  E-value=0.0036  Score=55.38  Aligned_cols=80  Identities=21%  Similarity=0.233  Sum_probs=51.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHH-cCCCeEEEEcCChhhHHHH----HHcCCC-EEEcCCCCC-ccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARI-AGASRIIGVDRSSKRFEEA----KKFGVT-DFVNTSEHD-RPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~-~g~~~Vi~~~~~~~~~~~~----~~~G~~-~vv~~~~~~-~~~~~~i~~~~~--~  264 (361)
                      .+.++||+|+ |++|...++.+.. .|+ +|++++++.++.+.+    ++.+.. ..+..+-.+ ..+.+.+..+..  +
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG   81 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4678999988 9999998887777 898 899999987765543    223432 222222222 123333333221  3


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      ++|++|+++|.
T Consensus        82 ~id~li~~Ag~   92 (276)
T 1wma_A           82 GLDVLVNNAGI   92 (276)
T ss_dssp             SEEEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            79999999873

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.91  E-value=0.0033  Score=56.07  Aligned_cols=80  Identities=21%  Similarity=0.288  Sum_probs=51.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-Hc---C---CC-EEEcCCCCC-ccHHHHHHHHcC-
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF---G---VT-DFVNTSEHD-RPIQEVIAEMTN-  263 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~---G---~~-~vv~~~~~~-~~~~~~i~~~~~-  263 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++++.+. ++   .   .. ..+..+-.+ ..+.+.+..... 
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   83 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence            3678999988 9999999998888898 8999999988766543 22   2   12 122222222 123333332221 


Q ss_pred             -CCccEEEEccCC
Q 018072          264 -GGVDRSVECTGN  275 (361)
Q Consensus       264 -~g~Dvvid~~g~  275 (361)
                       +++|++|+++|.
T Consensus        84 ~g~id~lv~~Ag~   96 (278)
T 1spx_A           84 FGKLDILVNNAGA   96 (278)
T ss_dssp             HSCCCEEEECCC-
T ss_pred             cCCCCEEEECCCC
Confidence             379999999874

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=96.90  E-value=0.0037  Score=55.32  Aligned_cols=80  Identities=19%  Similarity=0.186  Sum_probs=53.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCC-EEEcCCCCC-ccHHHHHHHHcC--CCccE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVT-DFVNTSEHD-RPIQEVIAEMTN--GGVDR  268 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~-~vv~~~~~~-~~~~~~i~~~~~--~g~Dv  268 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.+ +... ..+..+-.+ ..+.+.+.....  +++|+
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~   89 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGA-TVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDL   89 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4678999988 9999999998888998 89999999887766543 3221 222222222 123333332221  37999


Q ss_pred             EEEccCC
Q 018072          269 SVECTGN  275 (361)
Q Consensus       269 vid~~g~  275 (361)
                      +|+++|.
T Consensus        90 lv~~Ag~   96 (263)
T 3ak4_A           90 LCANAGV   96 (263)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9999873

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=96.90  E-value=0.0017  Score=57.59  Aligned_cols=79  Identities=18%  Similarity=0.170  Sum_probs=52.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhH-HHHHHcCCCEEEcCCCCC-ccHHHHHHHHcC--CCccEE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRF-EEAKKFGVTDFVNTSEHD-RPIQEVIAEMTN--GGVDRS  269 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~-~~~~~~G~~~vv~~~~~~-~~~~~~i~~~~~--~g~Dvv  269 (361)
                      .+.++||+|+ |++|.+.++.+...|+ +|+++++++++. +.+++.++.. +..+-.+ .++.+.+.....  +++|++
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~Dv~~~~~v~~~~~~~~~~~g~iD~l  103 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGH-RVIISYRTEHASVTELRQAGAVA-LYGDFSCETGIMAFIDLLKTQTSSLRAV  103 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESSCCHHHHHHHHHTCEE-EECCTTSHHHHHHHHHHHHHHCSCCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHhcCCeE-EECCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            3678999987 9999999998888898 899998887653 4445566533 2222222 223333333321  379999


Q ss_pred             EEccCC
Q 018072          270 VECTGN  275 (361)
Q Consensus       270 id~~g~  275 (361)
                      |+++|.
T Consensus       104 v~nAg~  109 (260)
T 3gem_A          104 VHNASE  109 (260)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999883

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=96.89  E-value=0.01  Score=51.67  Aligned_cols=77  Identities=22%  Similarity=0.279  Sum_probs=53.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCEEEcCCCCCccHHHHHHHHcC--CCccEEE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTN--GGVDRSV  270 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~vv~~~~~~~~~~~~i~~~~~--~g~Dvvi  270 (361)
                      ++.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.+ +....++..+-.+  . +.+..+..  +++|++|
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~--~-~~~~~~~~~~~~id~vi   81 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDLGD--W-EATERALGSVGPVDLLV   81 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTC--H-HHHHHHHTTCCCCCEEE
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCCCEEEEeCCC--H-HHHHHHHHHcCCCCEEE
Confidence            4689999998 9999999999888998 89999999887765533 3222333322222  1 22333322  3689999


Q ss_pred             EccCC
Q 018072          271 ECTGN  275 (361)
Q Consensus       271 d~~g~  275 (361)
                      +++|.
T Consensus        82 ~~Ag~   86 (244)
T 3d3w_A           82 NNAAV   86 (244)
T ss_dssp             ECCCC
T ss_pred             ECCcc
Confidence            99873

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=96.89  E-value=0.0059  Score=53.80  Aligned_cols=78  Identities=19%  Similarity=0.177  Sum_probs=51.6

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-EEcCCCCC-ccHHHHHHHHc--CCCc
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHD-RPIQEVIAEMT--NGGV  266 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-vv~~~~~~-~~~~~~i~~~~--~~g~  266 (361)
                      +.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.    +.+... .+..+-.+ .++.+.+....  -+++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   80 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGF   80 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            468999988 9999999998888998 8999999987765442    234332 22222222 12333333322  1379


Q ss_pred             cEEEEccC
Q 018072          267 DRSVECTG  274 (361)
Q Consensus       267 Dvvid~~g  274 (361)
                      |++|+++|
T Consensus        81 d~lv~nAg   88 (256)
T 1geg_A           81 DVIVNNAG   88 (256)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=96.89  E-value=0.0079  Score=54.19  Aligned_cols=103  Identities=18%  Similarity=0.225  Sum_probs=64.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhh-HHH----HHHcCCCEE-EcCCCCC-ccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-FEE----AKKFGVTDF-VNTSEHD-RPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~-~~~----~~~~G~~~v-v~~~~~~-~~~~~~i~~~~~--~  264 (361)
                      .|.++||+|+ |++|...++.+...|+ +|+++++++++ .+.    +++.|.... +..+-.+ .++.+.+.+...  +
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  124 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLG  124 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5789999988 9999999999889999 89888887653 222    233454432 2222222 123333333222  3


Q ss_pred             CccEEEEccCCh-----------H---------------HHHHHHHHhcCCCcEEEEEcCC
Q 018072          265 GVDRSVECTGNI-----------D---------------NMISAFECVHDGWGVAVLVGVP  299 (361)
Q Consensus       265 g~Dvvid~~g~~-----------~---------------~~~~~~~~l~~~~G~iv~~g~~  299 (361)
                      ++|++|+++|..           +               ..+.+++.++.. |+++.++..
T Consensus       125 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-g~iv~isS~  184 (291)
T 3ijr_A          125 SLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQG-DVIINTASI  184 (291)
T ss_dssp             SCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTT-CEEEEECCT
T ss_pred             CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhC-CEEEEEech
Confidence            799999997731           1               123344455666 899998754

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=96.89  E-value=0.0035  Score=55.17  Aligned_cols=80  Identities=19%  Similarity=0.259  Sum_probs=53.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----c--C-C-CEEEcCCCCC-ccHHHHHHHHcC-
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----F--G-V-TDFVNTSEHD-RPIQEVIAEMTN-  263 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~--G-~-~~vv~~~~~~-~~~~~~i~~~~~-  263 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.+    .  + . ...+..+-.+ .++.+.+..... 
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK   84 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence            4678999988 9999999998888899 89999999887766533    1  2 2 2222222222 123333333222 


Q ss_pred             -CCccEEEEccCC
Q 018072          264 -GGVDRSVECTGN  275 (361)
Q Consensus       264 -~g~Dvvid~~g~  275 (361)
                       +++|++|+++|.
T Consensus        85 ~g~iD~lvnnAg~   97 (250)
T 3nyw_A           85 YGAVDILVNAAAM   97 (250)
T ss_dssp             HCCEEEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence             379999999984

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.87  E-value=0.0048  Score=54.39  Aligned_cols=79  Identities=27%  Similarity=0.256  Sum_probs=53.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCC-ccHHHHHHHHcC--CCccEEE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD-RPIQEVIAEMTN--GGVDRSV  270 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~-~~~~~~i~~~~~--~g~Dvvi  270 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+..+++.. ..+..+-.+ .++.+.+.....  +++|++|
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv   82 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVLV   82 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            3678999988 9999999998888998 89999998877444444542 333333222 123333333221  3799999


Q ss_pred             EccCC
Q 018072          271 ECTGN  275 (361)
Q Consensus       271 d~~g~  275 (361)
                      +++|.
T Consensus        83 ~~Ag~   87 (256)
T 2d1y_A           83 NNAAI   87 (256)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99873

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=96.86  E-value=0.0052  Score=53.80  Aligned_cols=80  Identities=23%  Similarity=0.319  Sum_probs=51.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHH----HHcCCCE-EEcCCCCC-ccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~-~~~~~~~~----~~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~  264 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++ ++++.+.+    ++.+... .+..+-.+ .++.+.+.....  +
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGA-NVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG   81 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3678999987 9999999998888998 8888888 77665543    2235432 22222222 123333333221  3


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      ++|++|+++|.
T Consensus        82 ~id~lv~nAg~   92 (246)
T 2uvd_A           82 QVDILVNNAGV   92 (246)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999883

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=96.86  E-value=0.0014  Score=58.33  Aligned_cols=79  Identities=18%  Similarity=0.189  Sum_probs=52.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCC-ccHHHHHHHHcC--CCccEEE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD-RPIQEVIAEMTN--GGVDRSV  270 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~-~~~~~~i~~~~~--~g~Dvvi  270 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++++.+..-.. ..+..+-.+ .++.+.+.....  +++|++|
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv   92 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGH-PLLLLARRVERLKALNLPNT-LCAQVDVTDKYTFDTAITRAEKIYGPADAIV   92 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHTTCCTTE-EEEECCTTCHHHHHHHHHHHHHHHCSEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHhhcCCc-eEEEecCCCHHHHHHHHHHHHHHCCCCCEEE
Confidence            4678999988 9999999998888999 89999999887655432211 122222222 123333333222  3799999


Q ss_pred             EccCC
Q 018072          271 ECTGN  275 (361)
Q Consensus       271 d~~g~  275 (361)
                      +++|.
T Consensus        93 nnAg~   97 (266)
T 3p19_A           93 NNAGM   97 (266)
T ss_dssp             ECCCC
T ss_pred             ECCCc
Confidence            99984

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=96.86  E-value=0.0037  Score=55.36  Aligned_cols=80  Identities=26%  Similarity=0.314  Sum_probs=55.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCEEEcCCC-CC-ccHHHHHHHHcC--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDFVNTSE-HD-RPIQEVIAEMTN--GG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~vv~~~~-~~-~~~~~~i~~~~~--~g  265 (361)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+    ++.|.+.....-+ .+ .++.+.+.....  ++
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   86 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIH   86 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence            4788999987 8999999999999999 999999998876554    3456544322212 22 224444444332  37


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++++++|.
T Consensus        87 iDiLVNNAG~   96 (255)
T 4g81_D           87 VDILINNAGI   96 (255)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECCCC
Confidence            9999999874

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=96.85  E-value=0.0035  Score=56.13  Aligned_cols=80  Identities=21%  Similarity=0.302  Sum_probs=53.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHD-RPIQEVIAEMTN--GG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g  265 (361)
                      .|.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.    +.+... .+..+-.+ .++.+.+.+...  ++
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  109 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGA-QVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGG  109 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999987 9999999998888999 8999999987765543    234332 22222222 123333333322  37


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++|+++|.
T Consensus       110 iD~lvnnAg~  119 (276)
T 3r1i_A          110 IDIAVCNAGI  119 (276)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.84  E-value=0.01  Score=53.77  Aligned_cols=88  Identities=20%  Similarity=0.279  Sum_probs=61.8

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 018072          197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  276 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~  276 (361)
                      .+|.|+|.|.+|...+..+...|. +|+++++++++.+.+.+.|.........+   .       . ...|+||.++..+
T Consensus         8 ~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~~~~~~e---~-------~-~~aDvvi~~vp~~   75 (303)
T 3g0o_A            8 FHVGIVGLGSMGMGAARSCLRAGL-STWGADLNPQACANLLAEGACGAAASARE---F-------A-GVVDALVILVVNA   75 (303)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEESSSTT---T-------T-TTCSEEEECCSSH
T ss_pred             CeEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCCccccCCHHH---H-------H-hcCCEEEEECCCH
Confidence            579999999999999988888898 89999999999999988887652211111   0       0 2468888888875


Q ss_pred             HHHHHHH-------HHhcCCCcEEEEEc
Q 018072          277 DNMISAF-------ECVHDGWGVAVLVG  297 (361)
Q Consensus       277 ~~~~~~~-------~~l~~~~G~iv~~g  297 (361)
                      ..++..+       +.++++ ..++..+
T Consensus        76 ~~~~~v~~~~~~l~~~l~~g-~ivv~~s  102 (303)
T 3g0o_A           76 AQVRQVLFGEDGVAHLMKPG-SAVMVSS  102 (303)
T ss_dssp             HHHHHHHC--CCCGGGSCTT-CEEEECS
T ss_pred             HHHHHHHhChhhHHhhCCCC-CEEEecC
Confidence            5555543       334453 4555544

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=96.84  E-value=0.005  Score=53.67  Aligned_cols=75  Identities=19%  Similarity=0.263  Sum_probs=52.0

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEE-EcCCCCCccHHHHHHHHcC--CCccEEEE
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTN--GGVDRSVE  271 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~v-v~~~~~~~~~~~~i~~~~~--~g~Dvvid  271 (361)
                      +.++||+|+ |++|...++.+...|+ +|+++++++++  ..++++...+ .|..+  .++.+.+.....  +++|++++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~-~V~~~~r~~~~--~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~g~id~lv~   76 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGY-RVAIASRNPEE--AAQSLGAVPLPTDLEK--DDPKGLVKRALEALGGLHVLVH   76 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHH--HHHHHTCEEEECCTTT--SCHHHHHHHHHHHHTSCCEEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHH--HHHhhCcEEEecCCch--HHHHHHHHHHHHHcCCCCEEEE
Confidence            568999988 9999999998888998 89999998876  3344563222 23333  234444443322  37999999


Q ss_pred             ccCC
Q 018072          272 CTGN  275 (361)
Q Consensus       272 ~~g~  275 (361)
                      ++|.
T Consensus        77 ~Ag~   80 (239)
T 2ekp_A           77 AAAV   80 (239)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9873

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=96.81  E-value=0.0012  Score=60.54  Aligned_cols=104  Identities=21%  Similarity=0.199  Sum_probs=71.3

Q ss_pred             hhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHH
Q 018072          187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEM  261 (361)
Q Consensus       187 ~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~  261 (361)
                      +.+...++++++||-+|+|. |..+..+++..+. .+|+++|.+++.++.+++    .|...+ .....+  ..+..  .
T Consensus        67 l~~~l~~~~~~~VLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v-~~~~~d--~~~~~--~  140 (317)
T 1dl5_A           67 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENV-IFVCGD--GYYGV--P  140 (317)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSE-EEEESC--GGGCC--G
T ss_pred             HHHhcCCCCcCEEEEecCCc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCe-EEEECC--hhhcc--c
Confidence            34566789999999999987 8888888887642 479999999998888765    354431 111111  11100  0


Q ss_pred             cCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEc
Q 018072          262 TNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       262 ~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      ..+.||+|+....-......+.+.|+++ |++++.-
T Consensus       141 ~~~~fD~Iv~~~~~~~~~~~~~~~Lkpg-G~lvi~~  175 (317)
T 1dl5_A          141 EFSPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVPI  175 (317)
T ss_dssp             GGCCEEEEEECSBBSCCCHHHHHHEEEE-EEEEEEB
T ss_pred             cCCCeEEEEEcCCHHHHHHHHHHhcCCC-cEEEEEE
Confidence            1247999998766544557788899997 9987763

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=96.80  E-value=0.0063  Score=53.05  Aligned_cols=103  Identities=17%  Similarity=0.179  Sum_probs=69.8

Q ss_pred             hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHHcCCC----EEEcCCCCCccHHHHHHHHc
Q 018072          188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKFGVT----DFVNTSEHDRPIQEVIAEMT  262 (361)
Q Consensus       188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~~G~~----~vv~~~~~~~~~~~~i~~~~  262 (361)
                      .+...++||++||=+|+|. |..+..+|+..|. .+|+++|.+++.++.+++.-..    ..+.....+  .. .. ...
T Consensus        70 l~~l~ikpG~~VldlG~G~-G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~--p~-~~-~~~  144 (233)
T 4df3_A           70 LIELPVKEGDRILYLGIAS-GTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARF--PE-KY-RHL  144 (233)
T ss_dssp             CSCCCCCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTC--GG-GG-TTT
T ss_pred             hhhcCCCCCCEEEEecCcC-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccC--cc-cc-ccc
Confidence            3557899999999999977 8888899988874 5899999999988887653221    112112111  00 00 011


Q ss_pred             CCCccEEEEccCChH----HHHHHHHHhcCCCcEEEEE
Q 018072          263 NGGVDRSVECTGNID----NMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       263 ~~g~Dvvid~~g~~~----~~~~~~~~l~~~~G~iv~~  296 (361)
                      .+.+|+||.....+.    .+..+.+.|+++ |++++.
T Consensus       145 ~~~vDvVf~d~~~~~~~~~~l~~~~r~LKpG-G~lvI~  181 (233)
T 4df3_A          145 VEGVDGLYADVAQPEQAAIVVRNARFFLRDG-GYMLMA  181 (233)
T ss_dssp             CCCEEEEEECCCCTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             cceEEEEEEeccCChhHHHHHHHHHHhccCC-CEEEEE
Confidence            236899887665443    466777889997 998765

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=96.80  E-value=0.011  Score=51.91  Aligned_cols=79  Identities=28%  Similarity=0.361  Sum_probs=50.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhh--HHHHHHcCCCEE-EcCCCCC-ccHHHHHHHHcC--CCcc
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR--FEEAKKFGVTDF-VNTSEHD-RPIQEVIAEMTN--GGVD  267 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~--~~~~~~~G~~~v-v~~~~~~-~~~~~~i~~~~~--~g~D  267 (361)
                      .+.++||+|+ |++|...++.+...|+ +|++++++++.  .+.+.+.+.... +..+-.+ .++.+.+.....  +++|
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGA-NIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVD   81 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            3678999988 9999999998888998 89999887651  222333354332 2222222 123333332221  3799


Q ss_pred             EEEEccC
Q 018072          268 RSVECTG  274 (361)
Q Consensus       268 vvid~~g  274 (361)
                      ++|+++|
T Consensus        82 ~lv~~Ag   88 (255)
T 2q2v_A           82 ILVNNAG   88 (255)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=96.79  E-value=0.0029  Score=55.92  Aligned_cols=79  Identities=24%  Similarity=0.335  Sum_probs=53.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FVNTSEHD-RPIQEVIAEMTN--GG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g  265 (361)
                      .|.++||+|+ |++|.+.++.+...|+ +|+.+++++++.+.+.+    .+... .+..+-.+ .++.+.+.....  ++
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   83 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGR   83 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4678999987 9999999999889999 89999999988776543    23322 22222222 123333333322  37


Q ss_pred             ccEEEEccC
Q 018072          266 VDRSVECTG  274 (361)
Q Consensus       266 ~Dvvid~~g  274 (361)
                      +|++|+++|
T Consensus        84 id~lv~nAg   92 (257)
T 3imf_A           84 IDILINNAA   92 (257)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999998

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=96.78  E-value=0.0034  Score=52.79  Aligned_cols=104  Identities=22%  Similarity=0.249  Sum_probs=69.6

Q ss_pred             hcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcCC
Q 018072          190 VAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNG  264 (361)
Q Consensus       190 ~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g-~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~~  264 (361)
                      ...++++++||-+|+|. |..+..+++..+ ..+|+++|.+++.++.+++    .|...-+.....+  +. .+....++
T Consensus        17 ~~~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d--~~-~~~~~~~~   92 (197)
T 3eey_A           17 KMFVKEGDTVVDATCGN-GNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDG--HQ-NMDKYIDC   92 (197)
T ss_dssp             HHHCCTTCEEEESCCTT-SHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSC--GG-GGGGTCCS
T ss_pred             HhcCCCCCEEEEcCCCC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECC--HH-HHhhhccC
Confidence            34578999999999876 788888888864 2399999999998887765    3441111111111  10 11112234


Q ss_pred             CccEEEEccCC---------------hHHHHHHHHHhcCCCcEEEEEcC
Q 018072          265 GVDRSVECTGN---------------IDNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       265 g~Dvvid~~g~---------------~~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      .||+|+...+-               ...+..+.+.|+++ |++++...
T Consensus        93 ~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~g-G~l~~~~~  140 (197)
T 3eey_A           93 PVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTG-GIITVVIY  140 (197)
T ss_dssp             CEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             CceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCC-CEEEEEEc
Confidence            79999976532               24788999999997 99987754

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=96.78  E-value=0.0094  Score=53.29  Aligned_cols=103  Identities=24%  Similarity=0.291  Sum_probs=63.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCC------------hhhHHHH----HHcCCCEE-EcCCCCC-ccHH
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS------------SKRFEEA----KKFGVTDF-VNTSEHD-RPIQ  255 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~------------~~~~~~~----~~~G~~~v-v~~~~~~-~~~~  255 (361)
                      .|.++||+|+ +++|...++.+...|+ +|+.++++            .++++.+    ++.+.... +..+-.+ .++.
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   87 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVS   87 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHH
Confidence            4789999988 8999999999889999 89999886            4444332    33454332 2222222 1233


Q ss_pred             HHHHHHcC--CCccEEEEccCCh--------HHH---------------HHHHHHhcCCCcEEEEEcCC
Q 018072          256 EVIAEMTN--GGVDRSVECTGNI--------DNM---------------ISAFECVHDGWGVAVLVGVP  299 (361)
Q Consensus       256 ~~i~~~~~--~g~Dvvid~~g~~--------~~~---------------~~~~~~l~~~~G~iv~~g~~  299 (361)
                      +.+.....  +++|++|+++|..        +.+               ..+++.+... |+++.++..
T Consensus        88 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS~  155 (287)
T 3pxx_A           88 RELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSG-ASIITTGSV  155 (287)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTT-CEEEEECCH
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcC-cEEEEeccc
Confidence            33333222  3799999998741        111               2333445566 899998753

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.76  E-value=0.0083  Score=57.03  Aligned_cols=96  Identities=13%  Similarity=0.225  Sum_probs=68.8

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      .+.+|+|+|.|.+|...++.++..|. .|++++.++++.+.+++.|...++- +..+   .+.++...-..+|+|+-+++
T Consensus         3 ~~~~viIiG~Gr~G~~va~~L~~~g~-~vvvId~d~~~v~~~~~~g~~vi~G-Dat~---~~~L~~agi~~A~~viv~~~   77 (413)
T 3l9w_A            3 HGMRVIIAGFGRFGQITGRLLLSSGV-KMVVLDHDPDHIETLRKFGMKVFYG-DATR---MDLLESAGAAKAEVLINAID   77 (413)
T ss_dssp             -CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEECCHHHHHHHHHTTCCCEES-CTTC---HHHHHHTTTTTCSEEEECCS
T ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHhCCCeEEEc-CCCC---HHHHHhcCCCccCEEEECCC
Confidence            35679999999999999999999998 8999999999999999998765442 2222   22344432237999999999


Q ss_pred             ChHHHH---HHHHHhcCCCcEEEEE
Q 018072          275 NIDNMI---SAFECVHDGWGVAVLV  296 (361)
Q Consensus       275 ~~~~~~---~~~~~l~~~~G~iv~~  296 (361)
                      ....-.   ...+.+.+. -+++.-
T Consensus        78 ~~~~n~~i~~~ar~~~p~-~~Iiar  101 (413)
T 3l9w_A           78 DPQTNLQLTEMVKEHFPH-LQIIAR  101 (413)
T ss_dssp             SHHHHHHHHHHHHHHCTT-CEEEEE
T ss_pred             ChHHHHHHHHHHHHhCCC-CeEEEE
Confidence            865433   334445554 455544

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=96.76  E-value=0.0053  Score=52.90  Aligned_cols=102  Identities=14%  Similarity=0.048  Sum_probs=70.1

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcC-----CCeEEEEcCChhhHHHHHHc----C-----CCE-EEcCCCCCccHHH
Q 018072          192 KPERGSSVAVFGLGAVGLAAAEGARIAG-----ASRIIGVDRSSKRFEEAKKF----G-----VTD-FVNTSEHDRPIQE  256 (361)
Q Consensus       192 ~~~~g~~VlI~G~g~vG~~a~~~a~~~g-----~~~Vi~~~~~~~~~~~~~~~----G-----~~~-vv~~~~~~~~~~~  256 (361)
                      .++++++||-+|+|. |..+..+++..+     ..+|+++|.+++.++.+++.    +     ... .+...+....+.+
T Consensus        77 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~  155 (227)
T 2pbf_A           77 VLKPGSRAIDVGSGS-GYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEE  155 (227)
T ss_dssp             TSCTTCEEEEESCTT-SHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHH
T ss_pred             hCCCCCEEEEECCCC-CHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccc
Confidence            578999999999987 888889998875     23899999999988887653    3     221 1111111111100


Q ss_pred             HHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEc
Q 018072          257 VIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       257 ~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      ..  ...+.||+|+.....+..+..+.+.|+++ |++++.-
T Consensus       156 ~~--~~~~~fD~I~~~~~~~~~~~~~~~~Lkpg-G~lv~~~  193 (227)
T 2pbf_A          156 EK--KELGLFDAIHVGASASELPEILVDLLAEN-GKLIIPI  193 (227)
T ss_dssp             HH--HHHCCEEEEEECSBBSSCCHHHHHHEEEE-EEEEEEE
T ss_pred             cC--ccCCCcCEEEECCchHHHHHHHHHhcCCC-cEEEEEE
Confidence            00  11247999998877667788999999997 9987664

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=96.76  E-value=0.017  Score=51.47  Aligned_cols=103  Identities=24%  Similarity=0.351  Sum_probs=64.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCC-hhhHHHH----HHcCCCEE-EcCCCCC-ccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS-SKRFEEA----KKFGVTDF-VNTSEHD-RPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~-~~~~~~~----~~~G~~~v-v~~~~~~-~~~~~~i~~~~~--~  264 (361)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.++++ +++.+.+    ++.|.... +..+-.+ .++.+.+.+...  +
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  108 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGA-AVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALG  108 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5789999988 8999999998888999 78777444 4444433    33455432 2222222 223333333322  3


Q ss_pred             CccEEEEccCCh----------H---------------HHHHHHHHhcCCCcEEEEEcCC
Q 018072          265 GVDRSVECTGNI----------D---------------NMISAFECVHDGWGVAVLVGVP  299 (361)
Q Consensus       265 g~Dvvid~~g~~----------~---------------~~~~~~~~l~~~~G~iv~~g~~  299 (361)
                      ++|++|+++|..          +               ..+.+.+.|+.. |+++.++..
T Consensus       109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~-g~iv~isS~  167 (271)
T 3v2g_A          109 GLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDG-GRIITIGSN  167 (271)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT-CEEEEECCG
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC-CEEEEEeCh
Confidence            799999998741          1               123455667776 999998753

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=96.75  E-value=0.00045  Score=60.52  Aligned_cols=100  Identities=16%  Similarity=0.177  Sum_probs=67.0

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCE--EEcCCCCCccHHHHHHHHcCCCccEEE
Q 018072          193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--FVNTSEHDRPIQEVIAEMTNGGVDRSV  270 (361)
Q Consensus       193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~--vv~~~~~~~~~~~~i~~~~~~g~Dvvi  270 (361)
                      ..+|.+||-+|+|. |..+..+++..+. +|++++.+++-++.+++.....  -+.....+  +.+.+..+.++.||.|+
T Consensus        58 ~~~G~rVLdiG~G~-G~~~~~~~~~~~~-~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~--a~~~~~~~~~~~FD~i~  133 (236)
T 3orh_A           58 SSKGGRVLEVGFGM-AIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGL--WEDVAPTLPDGHFDGIL  133 (236)
T ss_dssp             TTTCEEEEEECCTT-SHHHHHHTTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEESC--HHHHGGGSCTTCEEEEE
T ss_pred             ccCCCeEEEECCCc-cHHHHHHHHhCCc-EEEEEeCCHHHHHHHHHHHhhCCCceEEEeeh--HHhhcccccccCCceEE
Confidence            47899999999974 7777788776665 8999999999999887743221  11111112  33333344445798884


Q ss_pred             -EccCC----------hHHHHHHHHHhcCCCcEEEEEc
Q 018072          271 -ECTGN----------IDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       271 -d~~g~----------~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                       |++..          ...+..+.+.|+|+ |+++++.
T Consensus       134 ~D~~~~~~~~~~~~~~~~~~~e~~rvLkPG-G~l~f~~  170 (236)
T 3orh_A          134 YDTYPLSEETWHTHQFNFIKNHAFRLLKPG-GVLTYCN  170 (236)
T ss_dssp             ECCCCCBGGGTTTHHHHHHHHTHHHHEEEE-EEEEECC
T ss_pred             EeeeecccchhhhcchhhhhhhhhheeCCC-CEEEEEe
Confidence             54432          23466788999997 9998763

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=96.75  E-value=0.0073  Score=53.39  Aligned_cols=80  Identities=18%  Similarity=0.299  Sum_probs=50.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEE-cCChhhHHHH----HHcCCCE-EEcCCCCC-ccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~-~~~~~~~~~~----~~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~  264 (361)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+ ++++++.+.+    ++.|... .+..+-.+ .++.+.+.+...  +
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   85 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGA-NVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFG   85 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            4689999988 8999999998888999 77777 6666554433    3345432 22222222 123333333222  3


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      ++|++++++|.
T Consensus        86 ~id~lv~nAg~   96 (259)
T 3edm_A           86 EIHGLVHVAGG   96 (259)
T ss_dssp             SEEEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999999874

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=96.75  E-value=0.0043  Score=54.67  Aligned_cols=80  Identities=26%  Similarity=0.298  Sum_probs=53.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCCE-EEcCCCCC-ccHHHHHHHHcC--CCccE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD-FVNTSEHD-RPIQEVIAEMTN--GGVDR  268 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g~Dv  268 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+. +++... .+..+-.+ .++.+.+.....  +++|+
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG   82 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4678999988 9999999999888999 8999999988776553 344332 22222222 223333333322  36999


Q ss_pred             EEEccCC
Q 018072          269 SVECTGN  275 (361)
Q Consensus       269 vid~~g~  275 (361)
                      +|+++|.
T Consensus        83 lv~nAg~   89 (254)
T 1hdc_A           83 LVNNAGI   89 (254)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999873

>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}

Probab=96.75  E-value=0.0034  Score=58.54  Aligned_cols=133  Identities=18%  Similarity=0.167  Sum_probs=85.1

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHc-CCCeEE-EEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072          197 SSVAVFGLGAVGLAAAEGARIA-GASRII-GVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~-g~~~Vi-~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      -+|.|+|+|.+|...+..++.. +. +++ +.++++++.+.++++|+..   +.+    +.+.+.   +..+|+|+.++.
T Consensus         6 ~~vgiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~a~~~g~~~---~~~----~~~ll~---~~~~D~V~i~tp   74 (359)
T 3e18_A            6 YQLVIVGYGGMGSYHVTLASAADNL-EVHGVFDILAEKREAAAQKGLKI---YES----YEAVLA---DEKVDAVLIATP   74 (359)
T ss_dssp             EEEEEECCSHHHHHHHHHHHTSTTE-EEEEEECSSHHHHHHHHTTTCCB---CSC----HHHHHH---CTTCCEEEECSC
T ss_pred             CcEEEECcCHHHHHHHHHHHhCCCc-EEEEEEcCCHHHHHHHHhcCCce---eCC----HHHHhc---CCCCCEEEEcCC
Confidence            4789999999999888877766 55 554 5588999888887787632   221    444433   237999999999


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecC-hhhhc--cccEEEEeeecCCCcCCcHHHHHHHHHcCCc
Q 018072          275 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKVI  344 (361)
Q Consensus       275 ~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~-~~~~~--~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l  344 (361)
                      .....+.+.++|..  |+-+++-.+-....-... .....  +++.+.-.+..++  ...+.++.+++++|+|
T Consensus        75 ~~~h~~~~~~al~a--GkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~r~--~p~~~~~k~~i~~g~i  143 (359)
T 3e18_A           75 NDSHKELAISALEA--GKHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMVHQNRRW--DEDFLIIKEMFEQKTI  143 (359)
T ss_dssp             GGGHHHHHHHHHHT--TCEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEECGGGG--CHHHHHHHHHHHHTTT
T ss_pred             cHHHHHHHHHHHHC--CCCEEeeCCCcCCHHHHHHHHHHHHHhCCeEEEEeeecc--CHHHHHHHHHHHcCCC
Confidence            87778888888885  666777543211111111 01111  4554433332233  4678888889988876

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=96.74  E-value=0.0048  Score=54.55  Aligned_cols=80  Identities=11%  Similarity=0.236  Sum_probs=53.1

Q ss_pred             CCCEEEEEcC-C--HHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCC--EEEcCCCCC-ccHHHHHHHHcC-
Q 018072          195 RGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT--DFVNTSEHD-RPIQEVIAEMTN-  263 (361)
Q Consensus       195 ~g~~VlI~G~-g--~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~--~vv~~~~~~-~~~~~~i~~~~~-  263 (361)
                      .|+++||+|+ |  ++|.+.++.+...|+ +|+.+++++++++.+.+    ++..  ..+..+-.+ .++.+.+..... 
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKD   83 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4789999997 5  899999999889999 89999999877666543    3432  222222222 223333333222 


Q ss_pred             -CCccEEEEccCC
Q 018072          264 -GGVDRSVECTGN  275 (361)
Q Consensus       264 -~g~Dvvid~~g~  275 (361)
                       +++|++++++|.
T Consensus        84 ~G~iD~lvnnAg~   96 (256)
T 4fs3_A           84 VGNIDGVYHSIAF   96 (256)
T ss_dssp             HCCCSEEEECCCC
T ss_pred             hCCCCEEEecccc
Confidence             379999999873

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=96.74  E-value=0.01  Score=52.70  Aligned_cols=104  Identities=22%  Similarity=0.318  Sum_probs=65.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcC-ChhhHHH----HHHcCCCEE-EcCCCCC-ccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEE----AKKFGVTDF-VNTSEHD-RPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~-~~~~~~~----~~~~G~~~v-v~~~~~~-~~~~~~i~~~~~--~  264 (361)
                      .|.++||+|+ +++|.+.++.+...|+ +|+++++ ++++.+.    +++.|.... +..+-.+ .++.+.+.....  +
T Consensus        17 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   95 (270)
T 3is3_A           17 DGKVALVTGSGRGIGAAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFG   95 (270)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4688999988 8999999999889999 7877655 4444333    334555432 2222222 223333333322  3


Q ss_pred             CccEEEEccCCh----------H---------------HHHHHHHHhcCCCcEEEEEcCCC
Q 018072          265 GVDRSVECTGNI----------D---------------NMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       265 g~Dvvid~~g~~----------~---------------~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      ++|++++++|..          +               ....+++.+.++ |+++.++...
T Consensus        96 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-g~iv~isS~~  155 (270)
T 3is3_A           96 HLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEG-GRIVLTSSNT  155 (270)
T ss_dssp             CCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTT-CEEEEECCTT
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcC-CeEEEEeCch
Confidence            789999998841          1               124556677776 9999998654

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=96.74  E-value=0.0062  Score=53.72  Aligned_cols=80  Identities=21%  Similarity=0.282  Sum_probs=54.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCCE-EEcCCCCC-ccHHHHHHHHcC--CCccE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD-FVNTSEHD-RPIQEVIAEMTN--GGVDR  268 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g~Dv  268 (361)
                      .+.++||+|+ +++|...++.+...|+ +|+.+++++++++.+. +++... .+..+-.+ .++.+.+.....  +++|+
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   86 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGA-KVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDI   86 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            4678999988 8999999998888998 8999999998877654 455433 22222222 123333333222  27899


Q ss_pred             EEEccCC
Q 018072          269 SVECTGN  275 (361)
Q Consensus       269 vid~~g~  275 (361)
                      +|+++|.
T Consensus        87 li~~Ag~   93 (261)
T 3n74_A           87 LVNNAGI   93 (261)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9999873

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=96.74  E-value=0.0052  Score=55.31  Aligned_cols=78  Identities=18%  Similarity=0.244  Sum_probs=54.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCE-EEcCCCCC-ccHHHHHHHHcCCCccEEE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD-FVNTSEHD-RPIQEVIAEMTNGGVDRSV  270 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~-vv~~~~~~-~~~~~~i~~~~~~g~Dvvi  270 (361)
                      .|.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.+ ++... .+..+-.+ .++.+.+...  +++|++|
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~--~~iD~lv   91 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRGA-TVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGV--SGADVLI   91 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTC--CCEEEEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhc--CCCCEEE
Confidence            5789999988 9999999998888998 89999999988777654 44322 22222222 1122222222  4799999


Q ss_pred             EccCC
Q 018072          271 ECTGN  275 (361)
Q Consensus       271 d~~g~  275 (361)
                      +++|.
T Consensus        92 ~nAg~   96 (291)
T 3rd5_A           92 NNAGI   96 (291)
T ss_dssp             ECCCC
T ss_pred             ECCcC
Confidence            99884

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=96.73  E-value=0.016  Score=51.90  Aligned_cols=80  Identities=18%  Similarity=0.232  Sum_probs=52.1

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHH----HHcCCCE-EE--cCCCCCccHHHHHHHHcC-
Q 018072          194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEA----KKFGVTD-FV--NTSEHDRPIQEVIAEMTN-  263 (361)
Q Consensus       194 ~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~-~~~~~~~~----~~~G~~~-vv--~~~~~~~~~~~~i~~~~~-  263 (361)
                      -.+.++||+|+ |++|...++.+...|+ +|+++++ ++++.+.+    .+.|... .+  |..+. .++.+.+..... 
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~  104 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAASGF-DIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADL-SSHQATVDAVVAE  104 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSG-GGHHHHHHHHHHH
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCH-HHHHHHHHHHHHH
Confidence            35789999988 9999999998889999 8888874 66554433    3345443 22  33222 234444443322 


Q ss_pred             -CCccEEEEccCC
Q 018072          264 -GGVDRSVECTGN  275 (361)
Q Consensus       264 -~g~Dvvid~~g~  275 (361)
                       +++|++|+++|.
T Consensus       105 ~g~iD~lvnnAg~  117 (280)
T 4da9_A          105 FGRIDCLVNNAGI  117 (280)
T ss_dssp             HSCCCEEEEECC-
T ss_pred             cCCCCEEEECCCc
Confidence             379999999985

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=96.73  E-value=0.0065  Score=53.43  Aligned_cols=98  Identities=21%  Similarity=0.288  Sum_probs=64.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCC--CccEEEE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG--GVDRSVE  271 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~--g~Dvvid  271 (361)
                      -+.++||+|+ |++|...++.+...|+ +|+++++++++.+.     ....++..+ ..++.+.+......  ++|++|+
T Consensus        21 m~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~-----~~~~~d~~d-~~~v~~~~~~~~~~~g~iD~li~   93 (251)
T 3orf_A           21 MSKNILVLGGSGALGAEVVKFFKSKSW-NTISIDFRENPNAD-----HSFTIKDSG-EEEIKSVIEKINSKSIKVDTFVC   93 (251)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCTTSS-----EEEECSCSS-HHHHHHHHHHHHTTTCCEEEEEE
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCcccccc-----cceEEEeCC-HHHHHHHHHHHHHHcCCCCEEEE
Confidence            3678999988 9999999999889999 89999998875431     112222222 12344444444332  7999999


Q ss_pred             ccCCh-------H-------------------HHHHHHHHhcCCCcEEEEEcCCC
Q 018072          272 CTGNI-------D-------------------NMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       272 ~~g~~-------~-------------------~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      ++|..       +                   ..+.+.+.+++. |+++.++...
T Consensus        94 ~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS~~  147 (251)
T 3orf_A           94 AAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQG-GLFVLTGASA  147 (251)
T ss_dssp             CCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCGG
T ss_pred             CCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccC-CEEEEEechh
Confidence            99830       1                   123445566676 8999997543

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=96.72  E-value=0.01  Score=51.45  Aligned_cols=79  Identities=23%  Similarity=0.255  Sum_probs=51.6

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-----HcCCCEE-EcCCCCC-ccHHHHHHHHcC--CC
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-----KFGVTDF-VNTSEHD-RPIQEVIAEMTN--GG  265 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-----~~G~~~v-v~~~~~~-~~~~~~i~~~~~--~g  265 (361)
                      +.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.     ..+.... +..+-.+ .++.+.+.....  ++
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGY-ALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD   80 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            578999987 9999999999999999 8999999988766542     3344432 2222222 112222211111  37


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++|+++|.
T Consensus        81 id~li~~Ag~   90 (235)
T 3l77_A           81 VDVVVANAGL   90 (235)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            9999999874

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=96.72  E-value=0.0053  Score=53.78  Aligned_cols=80  Identities=18%  Similarity=0.229  Sum_probs=52.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMTN--GG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g  265 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+    ++.+... .+..+-.+ ..+.+.+.....  ++
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   88 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK   88 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            4678999988 9999999998888898 899999998766543    2234432 22222222 123333332211  37


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++|+++|.
T Consensus        89 ~d~vi~~Ag~   98 (255)
T 1fmc_A           89 VDILVNNAGG   98 (255)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=96.72  E-value=0.0048  Score=54.77  Aligned_cols=79  Identities=23%  Similarity=0.261  Sum_probs=52.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-c-----CCCE-EEcCCCCC-ccHHHHHHHHcC--
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F-----GVTD-FVNTSEHD-RPIQEVIAEMTN--  263 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~-----G~~~-vv~~~~~~-~~~~~~i~~~~~--  263 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.+ +     +... .+..+-.+ .++.+.+.....  
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   90 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   90 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4678999988 9999999998888898 89999999887655432 1     4332 22222222 123333333222  


Q ss_pred             CCccEEEEccC
Q 018072          264 GGVDRSVECTG  274 (361)
Q Consensus       264 ~g~Dvvid~~g  274 (361)
                      +++|++|+++|
T Consensus        91 g~id~lv~nAg  101 (267)
T 1iy8_A           91 GRIDGFFNNAG  101 (267)
T ss_dssp             SCCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            36899999987

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=96.71  E-value=0.0086  Score=52.72  Aligned_cols=80  Identities=14%  Similarity=0.198  Sum_probs=53.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-EEcCCCCC-ccHHHHHHHHcC-CCc
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHD-RPIQEVIAEMTN-GGV  266 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-vv~~~~~~-~~~~~~i~~~~~-~g~  266 (361)
                      .+.++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+.    +.|... .+..+-.+ .++.+.+..... +++
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~i   84 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPL   84 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCc
Confidence            4678999988 8999999999989999 8999999988765543    235432 22222222 123222322211 579


Q ss_pred             cEEEEccCC
Q 018072          267 DRSVECTGN  275 (361)
Q Consensus       267 Dvvid~~g~  275 (361)
                      |++|+++|.
T Consensus        85 d~lv~nAg~   93 (252)
T 3h7a_A           85 EVTIFNVGA   93 (252)
T ss_dssp             EEEEECCCC
T ss_pred             eEEEECCCc
Confidence            999999984

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=96.71  E-value=0.0051  Score=55.05  Aligned_cols=102  Identities=16%  Similarity=0.146  Sum_probs=70.7

Q ss_pred             hhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc----CCCEEEcCCCCCccHHHHHHHHc
Q 018072          187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMT  262 (361)
Q Consensus       187 ~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~----G~~~vv~~~~~~~~~~~~i~~~~  262 (361)
                      +.+..+++++.+||-+|+|. |..+..+++..|. +|+++|.+++.++.+++.    |...-+.....+  +    ..+.
T Consensus        56 ~~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d--~----~~~~  127 (287)
T 1kpg_A           56 ALGKLGLQPGMTLLDVGCGW-GATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAG--W----EQFD  127 (287)
T ss_dssp             HHTTTTCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESC--G----GGCC
T ss_pred             HHHHcCCCCcCEEEEECCcc-cHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECC--h----hhCC
Confidence            34566788999999999976 7788888877788 999999999988887653    332111111111  1    1122


Q ss_pred             CCCccEEEEc-----cC---ChHHHHHHHHHhcCCCcEEEEEcC
Q 018072          263 NGGVDRSVEC-----TG---NIDNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       263 ~~g~Dvvid~-----~g---~~~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                       +.||+|+..     .+   ....+..+.+.|+++ |++++...
T Consensus       128 -~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  169 (287)
T 1kpg_A          128 -EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPAD-GVMLLHTI  169 (287)
T ss_dssp             -CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTT-CEEEEEEE
T ss_pred             -CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCC-CEEEEEEe
Confidence             579999875     22   134678889999998 99887643

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=96.70  E-value=0.0052  Score=53.68  Aligned_cols=80  Identities=20%  Similarity=0.297  Sum_probs=53.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCC--CEEEcCCC--CC-ccHHHHHHHHcC-
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGV--TDFVNTSE--HD-RPIQEVIAEMTN-  263 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~--~~vv~~~~--~~-~~~~~~i~~~~~-  263 (361)
                      .|.++||+|+ |++|...++.+...|+ +|+.+++++++++.+.    +.+.  ..++..+-  .+ .++.+.+..... 
T Consensus        13 ~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~   91 (247)
T 3i1j_A           13 KGRVILVTGAARGIGAAAARAYAAHGA-SVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE   91 (247)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence            5789999988 9999999998889999 8999999988776543    2332  22322222  22 123333333222 


Q ss_pred             -CCccEEEEccCC
Q 018072          264 -GGVDRSVECTGN  275 (361)
Q Consensus       264 -~g~Dvvid~~g~  275 (361)
                       +++|++|+++|.
T Consensus        92 ~g~id~lv~nAg~  104 (247)
T 3i1j_A           92 FGRLDGLLHNASI  104 (247)
T ss_dssp             HSCCSEEEECCCC
T ss_pred             CCCCCEEEECCcc
Confidence             379999999874

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=96.69  E-value=0.0056  Score=53.60  Aligned_cols=79  Identities=18%  Similarity=0.208  Sum_probs=51.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  273 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~  273 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++++.+.++.-...+..+-.+.+-.+.+.+.. +++|++|+++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~id~lv~~A   82 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEV-ERLDVLFNVA   82 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHC-SCCSEEEECC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHh-CCCCEEEECC
Confidence            3678999988 9999999998888998 89999999887665443321122222222211112222211 3799999998


Q ss_pred             CC
Q 018072          274 GN  275 (361)
Q Consensus       274 g~  275 (361)
                      |.
T Consensus        83 g~   84 (246)
T 2ag5_A           83 GF   84 (246)
T ss_dssp             CC
T ss_pred             cc
Confidence            73

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=96.69  E-value=0.005  Score=54.85  Aligned_cols=80  Identities=19%  Similarity=0.279  Sum_probs=53.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCEEEcCCCCC-ccHHHHHHHHcC--CCccEE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHD-RPIQEVIAEMTN--GGVDRS  269 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~vv~~~~~~-~~~~~~i~~~~~--~g~Dvv  269 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.+ +.....+..+-.+ ..+.+.+.....  +++|++
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l   86 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCV   86 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4688999988 9999999999888998 89999999887766543 3322233222222 123333332221  379999


Q ss_pred             EEccCC
Q 018072          270 VECTGN  275 (361)
Q Consensus       270 id~~g~  275 (361)
                      |+++|.
T Consensus        87 v~nAg~   92 (270)
T 1yde_A           87 VNNAGH   92 (270)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999873

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=96.68  E-value=0.0053  Score=54.69  Aligned_cols=80  Identities=18%  Similarity=0.237  Sum_probs=54.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCCE-EEcCCCCC-ccHHHHHHHHcC--CCccE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD-FVNTSEHD-RPIQEVIAEMTN--GGVDR  268 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g~Dv  268 (361)
                      .|.++||+|+ |++|...++.+...|+ +|+.+++++++++.+. +++... .+..+-.+ ..+.+.+.....  +++|+
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   88 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGA-RVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDI   88 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4689999987 9999999999889999 8999999988776653 455432 22222222 123333333222  37999


Q ss_pred             EEEccCC
Q 018072          269 SVECTGN  275 (361)
Q Consensus       269 vid~~g~  275 (361)
                      +++++|.
T Consensus        89 lv~nAg~   95 (271)
T 3tzq_B           89 VDNNAAH   95 (271)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999874

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=96.68  E-value=0.0068  Score=53.35  Aligned_cols=79  Identities=18%  Similarity=0.222  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHH----HHcCCCE-EEcCCCCC-ccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~-~~~~~~~~----~~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~  264 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++ ++++.+.+    ++.+... .+..+-.+ .++.+.+.....  +
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG   84 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            3678999988 9999999998888898 8999988 76655443    2234432 22222222 123333333221  3


Q ss_pred             CccEEEEccC
Q 018072          265 GVDRSVECTG  274 (361)
Q Consensus       265 g~Dvvid~~g  274 (361)
                      ++|++|+++|
T Consensus        85 ~id~li~~Ag   94 (261)
T 1gee_A           85 KLDVMINNAG   94 (261)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            6899999987

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=96.68  E-value=0.0076  Score=53.44  Aligned_cols=74  Identities=20%  Similarity=0.269  Sum_probs=48.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCC-ccHHHHHHHHcC--CCccEEE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD-RPIQEVIAEMTN--GGVDRSV  270 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~-~~~~~~i~~~~~--~g~Dvvi  270 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++     ...+ ..+..+-.+ ..+.+.+.....  +++|++|
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~-----~~~~-~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv   79 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGS-KVIDLSIHDPG-----EAKY-DHIECDVTNPDQVKASIDHIFKEYGSISVLV   79 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSCCC-----SCSS-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEecCccc-----CCce-EEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            3678999988 9999999999888998 89999888765     1111 222222222 123333333222  3699999


Q ss_pred             EccCC
Q 018072          271 ECTGN  275 (361)
Q Consensus       271 d~~g~  275 (361)
                      +++|.
T Consensus        80 ~~Ag~   84 (264)
T 2dtx_A           80 NNAGI   84 (264)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99873

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=96.67  E-value=0.0044  Score=55.51  Aligned_cols=80  Identities=23%  Similarity=0.383  Sum_probs=53.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCC---CE-EEcCCCCC-ccHHHHHHHHcC-
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGV---TD-FVNTSEHD-RPIQEVIAEMTN-  263 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~---~~-vv~~~~~~-~~~~~~i~~~~~-  263 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+    ++.+.   .. .+..+-.+ .++.+.+..... 
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   88 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW   88 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            4689999987 9999999998888999 899999998876554    23343   11 22222222 123333333322 


Q ss_pred             -CCccEEEEccCC
Q 018072          264 -GGVDRSVECTGN  275 (361)
Q Consensus       264 -~g~Dvvid~~g~  275 (361)
                       +++|++++++|.
T Consensus        89 ~g~id~lv~nAg~  101 (281)
T 3svt_A           89 HGRLHGVVHCAGG  101 (281)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence             378999999984

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=96.67  E-value=0.008  Score=52.72  Aligned_cols=80  Identities=20%  Similarity=0.216  Sum_probs=52.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCh-hhHH-HHHHcCCCE-EEcCCCCC-ccHHHHHHHHcC--CCcc
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS-KRFE-EAKKFGVTD-FVNTSEHD-RPIQEVIAEMTN--GGVD  267 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~-~~~~-~~~~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g~D  267 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++ ++.+ .+++.+... .+..+-.+ .++.+.+.....  +++|
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   84 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD   84 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence            4678999988 9999999998888998 899998987 6654 344555432 22222222 123333333221  3799


Q ss_pred             EEEEccCC
Q 018072          268 RSVECTGN  275 (361)
Q Consensus       268 vvid~~g~  275 (361)
                      ++|+++|.
T Consensus        85 ~lv~nAg~   92 (249)
T 2ew8_A           85 ILVNNAGI   92 (249)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999873

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=96.67  E-value=0.0099  Score=52.84  Aligned_cols=104  Identities=20%  Similarity=0.261  Sum_probs=63.8

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEE-cCChhhHHHH----HHcCCCEE-EcCCCCC-ccHHHHHHHHcC--
Q 018072          194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKRFEEA----KKFGVTDF-VNTSEHD-RPIQEVIAEMTN--  263 (361)
Q Consensus       194 ~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~-~~~~~~~~~~----~~~G~~~v-v~~~~~~-~~~~~~i~~~~~--  263 (361)
                      ..+.++||+|+ +++|.+.++.+...|+ +|+.+ .+++++.+.+    +..+.... +..+-.+ .++.+.+.....  
T Consensus        25 ~~~k~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  103 (267)
T 3u5t_A           25 ETNKVAIVTGASRGIGAAIAARLASDGF-TVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAF  103 (267)
T ss_dssp             --CCEEEEESCSSHHHHHHHHHHHHHTC-EEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35789999988 8999999988888899 77766 5565554443    33454332 2222222 123333333222  


Q ss_pred             CCccEEEEccCCh----------H---------------HHHHHHHHhcCCCcEEEEEcCC
Q 018072          264 GGVDRSVECTGNI----------D---------------NMISAFECVHDGWGVAVLVGVP  299 (361)
Q Consensus       264 ~g~Dvvid~~g~~----------~---------------~~~~~~~~l~~~~G~iv~~g~~  299 (361)
                      +++|++|+++|..          +               ....+++.++.. |+++.++..
T Consensus       104 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-g~iv~isS~  163 (267)
T 3u5t_A          104 GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVG-GRIINMSTS  163 (267)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCT
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CeEEEEeCh
Confidence            3799999998741          1               123555666776 999999753

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.66  E-value=0.0052  Score=54.46  Aligned_cols=81  Identities=22%  Similarity=0.292  Sum_probs=54.3

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-EEcCCCCC-ccHHHHHHHHcC--C
Q 018072          194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHD-RPIQEVIAEMTN--G  264 (361)
Q Consensus       194 ~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~  264 (361)
                      -.|.++||+|+ +++|...++.+...|+ +|+.+++++++++.+.    +.|... .+..+-.+ .++.+.+.....  +
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   87 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYG   87 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            35789999988 8999999998888999 8999999988766543    234433 22222222 123333333321  3


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      ++|++|+++|.
T Consensus        88 ~id~lv~nAg~   98 (264)
T 3ucx_A           88 RVDVVINNAFR   98 (264)
T ss_dssp             CCSEEEECCCS
T ss_pred             CCcEEEECCCC
Confidence            79999999864

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=96.66  E-value=0.0058  Score=53.60  Aligned_cols=80  Identities=20%  Similarity=0.313  Sum_probs=53.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHD-RPIQEVIAEMTN--GG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g  265 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++++.+.    +.|... .+..+-.+ ..+.+.+.....  ++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   84 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGA-AVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGG   84 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            3678999988 9999999998888999 8999999988766543    235432 22222222 123333333221  37


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++|+++|.
T Consensus        85 id~lv~nAg~   94 (247)
T 2jah_A           85 LDILVNNAGI   94 (247)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=96.66  E-value=0.0047  Score=55.10  Aligned_cols=79  Identities=19%  Similarity=0.230  Sum_probs=52.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCC-EEEcCCCCC-ccHHHHHHHHcC--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVT-DFVNTSEHD-RPIQEVIAEMTN--GG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~-~vv~~~~~~-~~~~~~i~~~~~--~g  265 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.    +.+.. ..+..+-.+ ..+.+.+.+...  ++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  105 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGA-MVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGA  105 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            4678999987 9999999998888999 9999999988765542    33433 222222222 123333333222  37


Q ss_pred             ccEEEEccC
Q 018072          266 VDRSVECTG  274 (361)
Q Consensus       266 ~Dvvid~~g  274 (361)
                      +|++|+++|
T Consensus       106 iD~lvnnAg  114 (270)
T 3ftp_A          106 LNVLVNNAG  114 (270)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=96.66  E-value=0.002  Score=53.70  Aligned_cols=102  Identities=12%  Similarity=0.128  Sum_probs=67.0

Q ss_pred             hcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcCCC
Q 018072          190 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGG  265 (361)
Q Consensus       190 ~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~~g  265 (361)
                      ...+++|++||=+|+|. |..+..+++. +. +|+++|.+++.++.+++    .|.+.+..... +  . +.+....++.
T Consensus        17 ~~~~~~~~~vLDiGcG~-G~~~~~la~~-~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~-~--~-~~l~~~~~~~   89 (185)
T 3mti_A           17 AEVLDDESIVVDATMGN-GNDTAFLAGL-SK-KVYAFDVQEQALGKTSQRLSDLGIENTELILD-G--H-ENLDHYVREP   89 (185)
T ss_dssp             HTTCCTTCEEEESCCTT-SHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHHTCCCEEEEES-C--G-GGGGGTCCSC
T ss_pred             HHhCCCCCEEEEEcCCC-CHHHHHHHHh-CC-EEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC-c--H-HHHHhhccCC
Confidence            35678999999999876 7788888877 65 99999999998887754    34432211111 1  1 1111223347


Q ss_pred             ccEEEEccCC-----------h----HHHHHHHHHhcCCCcEEEEEcCC
Q 018072          266 VDRSVECTGN-----------I----DNMISAFECVHDGWGVAVLVGVP  299 (361)
Q Consensus       266 ~Dvvid~~g~-----------~----~~~~~~~~~l~~~~G~iv~~g~~  299 (361)
                      ||+|+-+.+.           +    ..+..+.+.|+++ |+++++...
T Consensus        90 fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~~  137 (185)
T 3mti_A           90 IRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVG-GRLAIMIYY  137 (185)
T ss_dssp             EEEEEEEEC-----------CHHHHHHHHHHHHHHEEEE-EEEEEEEC-
T ss_pred             cCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCC-cEEEEEEeC
Confidence            9999876321           1    2457788899997 999887543

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=96.65  E-value=0.0055  Score=54.87  Aligned_cols=80  Identities=23%  Similarity=0.261  Sum_probs=54.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCCEE-EcCCCCC-ccHHHHHHHHcC--CCccE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDF-VNTSEHD-RPIQEVIAEMTN--GGVDR  268 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~~~v-v~~~~~~-~~~~~~i~~~~~--~g~Dv  268 (361)
                      .+.++||+|+ |++|.+.++.+...|+ +|+++++++++.+.+. +++.... +..+-.+ .++.+.+.....  +++|+
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKNGA-YVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDV  104 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4679999988 9999999998889999 8999999988776654 3554432 2222222 123333333222  37999


Q ss_pred             EEEccCC
Q 018072          269 SVECTGN  275 (361)
Q Consensus       269 vid~~g~  275 (361)
                      +|+++|.
T Consensus       105 lv~nAg~  111 (277)
T 4dqx_A          105 LVNNAGF  111 (277)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9999883

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.65  E-value=0.006  Score=54.06  Aligned_cols=79  Identities=25%  Similarity=0.299  Sum_probs=52.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcC-CC-EEEcCCCCC-ccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFG-VT-DFVNTSEHD-RPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G-~~-~vv~~~~~~-~~~~~~i~~~~~--~  264 (361)
                      .|.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.    +.+ .. ..+..+-.+ .++.+.+.....  +
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   87 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFG   87 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            4678999987 9999999998889999 8999999988766543    233 22 222222222 123333333222  3


Q ss_pred             CccEEEEccC
Q 018072          265 GVDRSVECTG  274 (361)
Q Consensus       265 g~Dvvid~~g  274 (361)
                      ++|++++++|
T Consensus        88 ~id~lvnnAg   97 (262)
T 3pk0_A           88 GIDVVCANAG   97 (262)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999988

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=96.65  E-value=0.0057  Score=54.93  Aligned_cols=80  Identities=18%  Similarity=0.255  Sum_probs=54.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FVNTSEHD-RPIQEVIAEMTN--GG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g  265 (361)
                      ++.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.+    .|... .+..+-.+ .++.+.+.....  ++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  105 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGV-TVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGH  105 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4678999987 8999999998888999 99999999887666543    23332 22222222 123333333322  37


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++++++|.
T Consensus       106 iD~lVnnAg~  115 (283)
T 3v8b_A          106 LDIVVANAGI  115 (283)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.64  E-value=0.011  Score=52.61  Aligned_cols=87  Identities=15%  Similarity=0.153  Sum_probs=61.4

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  275 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~  275 (361)
                      +.+++|+|+|++|.+++..+...| .+|+++.|+.+|.+.+.+++.. ...+.+    +         ..+|+||++++.
T Consensus       118 ~k~vlvlGaGGaaraia~~L~~~G-~~v~V~nRt~~ka~~la~~~~~-~~~~~~----l---------~~~DiVInaTp~  182 (269)
T 3phh_A          118 YQNALILGAGGSAKALACELKKQG-LQVSVLNRSSRGLDFFQRLGCD-CFMEPP----K---------SAFDLIINATSA  182 (269)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSCTTHHHHHHHTCE-EESSCC----S---------SCCSEEEECCTT
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHCCCe-EecHHH----h---------ccCCEEEEcccC
Confidence            889999999999999999999999 5999999999987766577743 332221    1         158999999764


Q ss_pred             hH----HH--HHHHHHhcCCCcEEEEEcC
Q 018072          276 ID----NM--ISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       276 ~~----~~--~~~~~~l~~~~G~iv~~g~  298 (361)
                      ..    .+  +...+.++++ ..++.+-.
T Consensus       183 Gm~~~~~l~~~~l~~~l~~~-~~v~D~vY  210 (269)
T 3phh_A          183 SLHNELPLNKEVLKGYFKEG-KLAYDLAY  210 (269)
T ss_dssp             CCCCSCSSCHHHHHHHHHHC-SEEEESCC
T ss_pred             CCCCCCCCChHHHHhhCCCC-CEEEEeCC
Confidence            21    11  1222356775 66666643

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=96.64  E-value=0.0023  Score=55.71  Aligned_cols=98  Identities=9%  Similarity=0.044  Sum_probs=62.5

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072          197 SSVAVFGL-GAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       197 ~~VlI~G~-g~vG~~a~~~a~~~g-~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      .+|||+|+ |.+|...++.+...| . +|+++++++++.+.+...++. ++..+-.+   .+.+..... ++|+||++.+
T Consensus        24 k~vlVtGatG~iG~~l~~~L~~~G~~-~V~~~~R~~~~~~~~~~~~~~-~~~~Dl~d---~~~~~~~~~-~~D~vv~~a~   97 (236)
T 3qvo_A           24 KNVLILGAGGQIARHVINQLADKQTI-KQTLFARQPAKIHKPYPTNSQ-IIMGDVLN---HAALKQAMQ-GQDIVYANLT   97 (236)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTE-EEEEEESSGGGSCSSCCTTEE-EEECCTTC---HHHHHHHHT-TCSEEEEECC
T ss_pred             cEEEEEeCCcHHHHHHHHHHHhCCCc-eEEEEEcChhhhcccccCCcE-EEEecCCC---HHHHHHHhc-CCCEEEEcCC
Confidence            57999997 999999999998888 6 899999998775443222222 22222222   123333332 6899999988


Q ss_pred             ChHH---HHHHHHHhcCC-CcEEEEEcCCC
Q 018072          275 NIDN---MISAFECVHDG-WGVAVLVGVPS  300 (361)
Q Consensus       275 ~~~~---~~~~~~~l~~~-~G~iv~~g~~~  300 (361)
                      ....   ...+++.++.. .++++.++...
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~  127 (236)
T 3qvo_A           98 GEDLDIQANSVIAAMKACDVKRLIFVLSLG  127 (236)
T ss_dssp             STTHHHHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred             CCchhHHHHHHHHHHHHcCCCEEEEEecce
Confidence            7432   23445555443 16899887644

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=96.64  E-value=0.015  Score=52.46  Aligned_cols=104  Identities=15%  Similarity=0.172  Sum_probs=64.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCh--hhHHH----HHHcCCCEEEcCCC-CC-ccHHHHHHHHcC--
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS--KRFEE----AKKFGVTDFVNTSE-HD-RPIQEVIAEMTN--  263 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~--~~~~~----~~~~G~~~vv~~~~-~~-~~~~~~i~~~~~--  263 (361)
                      .|.++||+|+ +++|...++.+...|+ +|+.++++.  ++.+.    +++.|....+..-+ .+ ..+.+.+.....  
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  126 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREAL  126 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            5789999988 9999999998889999 898887763  23322    23455544332222 22 123333333222  


Q ss_pred             CCccEEEEccCCh-----------H---------------HHHHHHHHhcCCCcEEEEEcCCC
Q 018072          264 GGVDRSVECTGNI-----------D---------------NMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       264 ~g~Dvvid~~g~~-----------~---------------~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      +++|++++++|..           +               ..+.++..+.++ |+++.++...
T Consensus       127 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-g~Iv~isS~~  188 (294)
T 3r3s_A          127 GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKG-ASIITTSSIQ  188 (294)
T ss_dssp             TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTT-CEEEEECCGG
T ss_pred             CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcC-CEEEEECChh
Confidence            3799999998841           1               122344456666 8999997543

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=96.64  E-value=0.0082  Score=53.04  Aligned_cols=80  Identities=31%  Similarity=0.466  Sum_probs=52.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-c----CCCE-EEcCCCCC-ccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F----GVTD-FVNTSEHD-RPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~----G~~~-vv~~~~~~-~~~~~~i~~~~~--~  264 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.+ +    +... .+..+-.+ .++.+.+.....  +
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGA-HIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFG   84 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3678999988 9999999998888998 89999999887655422 2    5432 22222222 123333333221  3


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      ++|++|+++|.
T Consensus        85 ~id~lv~~Ag~   95 (263)
T 3ai3_A           85 GADILVNNAGT   95 (263)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=96.63  E-value=0.0081  Score=52.65  Aligned_cols=80  Identities=25%  Similarity=0.261  Sum_probs=53.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FVNTSEHD-RPIQEVIAEMTN--GG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g  265 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.+    .+... .+..+-.+ .++.+.+.....  ++
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   86 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGG   86 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4689999988 9999999999889999 89999999887665532    34332 22222222 123333332221  37


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++|+++|.
T Consensus        87 id~li~~Ag~   96 (253)
T 3qiv_A           87 IDYLVNNAAI   96 (253)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999874

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=96.63  E-value=0.0042  Score=54.61  Aligned_cols=79  Identities=29%  Similarity=0.398  Sum_probs=53.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCC-EE--EcCCCCCccHHHHHHHHcC--CCcc
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVT-DF--VNTSEHDRPIQEVIAEMTN--GGVD  267 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~-~v--v~~~~~~~~~~~~i~~~~~--~g~D  267 (361)
                      .|.++||+|+ +++|...++.+...|+ +|+.+++++++.+.+.+ ++.. ..  .|..+. .++.+.+.....  +++|
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~~g~iD   85 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGA-KVIGTATSESGAQAISDYLGDNGKGMALNVTNP-ESIEAVLKAITDEFGGVD   85 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCTTCH-HHHHHHHHHHHHHHCCCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceEEEEeCCCH-HHHHHHHHHHHHHcCCCC
Confidence            4688999987 8999999999989999 89999999887766543 3332 12  233222 123333333322  3799


Q ss_pred             EEEEccCC
Q 018072          268 RSVECTGN  275 (361)
Q Consensus       268 vvid~~g~  275 (361)
                      ++++++|.
T Consensus        86 ~lv~nAg~   93 (248)
T 3op4_A           86 ILVNNAGI   93 (248)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999883

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=96.62  E-value=0.0057  Score=54.33  Aligned_cols=79  Identities=25%  Similarity=0.413  Sum_probs=54.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-----cCCCE-E--EcCCCCCccHHHHHHHHcC--
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVTD-F--VNTSEHDRPIQEVIAEMTN--  263 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-----~G~~~-v--v~~~~~~~~~~~~i~~~~~--  263 (361)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+.+     .+... .  .|..+.+ ++.+.+.....  
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~~   96 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGA-RLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPD-APAELARRAAEAF   96 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTT-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHH-HHHHHHHHHHHHc
Confidence            4688999987 9999999999989999 89999999887665432     34432 2  2333332 24434433322  


Q ss_pred             CCccEEEEccCC
Q 018072          264 GGVDRSVECTGN  275 (361)
Q Consensus       264 ~g~Dvvid~~g~  275 (361)
                      +++|++|+++|.
T Consensus        97 g~id~lv~nAg~  108 (266)
T 4egf_A           97 GGLDVLVNNAGI  108 (266)
T ss_dssp             TSCSEEEEECCC
T ss_pred             CCCCEEEECCCc
Confidence            379999999873

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=96.62  E-value=0.0043  Score=55.49  Aligned_cols=79  Identities=19%  Similarity=0.264  Sum_probs=51.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-Hc---CCCEEEcCCCCC-ccHHHHHHHHc--CCCc
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF---GVTDFVNTSEHD-RPIQEVIAEMT--NGGV  266 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~---G~~~vv~~~~~~-~~~~~~i~~~~--~~g~  266 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+. ++   +--..+..+-.+ ..+.+.+....  -+++
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGA-RVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARL  106 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            4678999988 9999999998888998 8999999988765543 22   311122112222 12333333222  1379


Q ss_pred             cEEEEccC
Q 018072          267 DRSVECTG  274 (361)
Q Consensus       267 Dvvid~~g  274 (361)
                      |++|+++|
T Consensus       107 D~lvnnAg  114 (276)
T 2b4q_A          107 DILVNNAG  114 (276)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999987

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=96.62  E-value=0.021  Score=49.50  Aligned_cols=75  Identities=21%  Similarity=0.320  Sum_probs=52.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-c-CCCEEEcCCCCCccHHHHHHHHcCC--CccEE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F-GVTDFVNTSEHDRPIQEVIAEMTNG--GVDRS  269 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~-G~~~vv~~~~~~~~~~~~i~~~~~~--g~Dvv  269 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.+ . +. .++..+-.+  . +.+..+...  ++|++
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~-~~~~~D~~~--~-~~~~~~~~~~~~id~v   80 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGI-EPVCVDLGD--W-DATEKALGGIGPVDLL   80 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTC-EEEECCTTC--H-HHHHHHHTTCCCCSEE
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCC-CcEEecCCC--H-HHHHHHHHHcCCCCEE
Confidence            4678999988 9999999998888998 89999999887765543 3 33 333222222  1 233333322  68999


Q ss_pred             EEccC
Q 018072          270 VECTG  274 (361)
Q Consensus       270 id~~g  274 (361)
                      |+++|
T Consensus        81 i~~Ag   85 (244)
T 1cyd_A           81 VNNAA   85 (244)
T ss_dssp             EECCC
T ss_pred             EECCc
Confidence            99988

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.61  E-value=0.0038  Score=55.84  Aligned_cols=80  Identities=25%  Similarity=0.319  Sum_probs=52.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCC---C-EEEcCCCCC-ccHHHHHHHHcC-
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGV---T-DFVNTSEHD-RPIQEVIAEMTN-  263 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~---~-~vv~~~~~~-~~~~~~i~~~~~-  263 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++++.+.+    .+.   . ..+..+-.+ ..+.+.+..... 
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   83 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence            4678999987 9999999998888999 89999999887665432    232   2 222222222 123333333221 


Q ss_pred             -CCccEEEEccCC
Q 018072          264 -GGVDRSVECTGN  275 (361)
Q Consensus       264 -~g~Dvvid~~g~  275 (361)
                       +++|++|+++|.
T Consensus        84 ~g~iD~lv~nAg~   96 (280)
T 1xkq_A           84 FGKIDVLVNNAGA   96 (280)
T ss_dssp             HSCCCEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence             369999999873

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=96.61  E-value=0.006  Score=53.88  Aligned_cols=96  Identities=24%  Similarity=0.293  Sum_probs=66.9

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcCCCccE
Q 018072          193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGGVDR  268 (361)
Q Consensus       193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dv  268 (361)
                      ++++++||-+|+|. |.+++.+++ .|. +|+++|.++...+.+++    .+..  +.....+  +.+.   +..+.||+
T Consensus       118 ~~~~~~VLDiGcG~-G~l~~~la~-~g~-~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d--~~~~---~~~~~fD~  187 (254)
T 2nxc_A          118 LRPGDKVLDLGTGS-GVLAIAAEK-LGG-KALGVDIDPMVLPQAEANAKRNGVR--PRFLEGS--LEAA---LPFGPFDL  187 (254)
T ss_dssp             CCTTCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCGGGHHHHHHHHHHTTCC--CEEEESC--HHHH---GGGCCEEE
T ss_pred             cCCCCEEEEecCCC-cHHHHHHHH-hCC-eEEEEECCHHHHHHHHHHHHHcCCc--EEEEECC--hhhc---CcCCCCCE
Confidence            67899999999976 777777666 577 99999999998887765    3443  2222222  3322   33347999


Q ss_pred             EEEccCC---hHHHHHHHHHhcCCCcEEEEEcCC
Q 018072          269 SVECTGN---IDNMISAFECVHDGWGVAVLVGVP  299 (361)
Q Consensus       269 vid~~g~---~~~~~~~~~~l~~~~G~iv~~g~~  299 (361)
                      |+.+.-.   ...+..+.+.|+++ |++++.+..
T Consensus       188 Vv~n~~~~~~~~~l~~~~~~Lkpg-G~lils~~~  220 (254)
T 2nxc_A          188 LVANLYAELHAALAPRYREALVPG-GRALLTGIL  220 (254)
T ss_dssp             EEEECCHHHHHHHHHHHHHHEEEE-EEEEEEEEE
T ss_pred             EEECCcHHHHHHHHHHHHHHcCCC-CEEEEEeec
Confidence            9976422   24567788899997 999887643

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.61  E-value=0.0086  Score=53.21  Aligned_cols=80  Identities=24%  Similarity=0.429  Sum_probs=52.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-----HcCCCEE-EcCCCCC-ccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-----KFGVTDF-VNTSEHD-RPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-----~~G~~~v-v~~~~~~-~~~~~~i~~~~~--~  264 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++++.+.     +.+.... +..+-.+ .++.+.+.....  +
T Consensus        20 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   98 (267)
T 1vl8_A           20 RGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFG   98 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4678999988 9999999998888998 8999999987765432     2354332 2222222 123333333221  3


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      ++|++|+++|.
T Consensus        99 ~iD~lvnnAg~  109 (267)
T 1vl8_A           99 KLDTVVNAAGI  109 (267)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999999874

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.61  E-value=0.02  Score=51.40  Aligned_cols=87  Identities=21%  Similarity=0.218  Sum_probs=62.5

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 018072          197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  276 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~  276 (361)
                      .+|.|+|.|.+|...++.+...|. +|+++++++++.+.+.+.|+...     .+  ..+.+.     ..|+||.++..+
T Consensus         2 ~~i~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-----~~--~~~~~~-----~aDvvi~~vp~~   68 (287)
T 3pef_A            2 QKFGFIGLGIMGSAMAKNLVKAGC-SVTIWNRSPEKAEELAALGAERA-----AT--PCEVVE-----SCPVTFAMLADP   68 (287)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEEC-----SS--HHHHHH-----HCSEEEECCSSH
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec-----CC--HHHHHh-----cCCEEEEEcCCH
Confidence            478999999999999998888898 89999999999998888775321     11  333332     368999998865


Q ss_pred             HHHHHHH-------HHhcCCCcEEEEEc
Q 018072          277 DNMISAF-------ECVHDGWGVAVLVG  297 (361)
Q Consensus       277 ~~~~~~~-------~~l~~~~G~iv~~g  297 (361)
                      ..++..+       +.++++ ..++..+
T Consensus        69 ~~~~~v~~~~~~l~~~l~~~-~~vi~~s   95 (287)
T 3pef_A           69 AAAEEVCFGKHGVLEGIGEG-RGYVDMS   95 (287)
T ss_dssp             HHHHHHHHSTTCHHHHCCTT-CEEEECS
T ss_pred             HHHHHHHcCcchHhhcCCCC-CEEEeCC
Confidence            5555444       455554 5555554

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=96.61  E-value=0.0063  Score=53.17  Aligned_cols=80  Identities=23%  Similarity=0.265  Sum_probs=53.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHD-RPIQEVIAEMTN--GG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g  265 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.    +.+... .+..+-.+ .++.+.+.....  ++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLA   82 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            3678999988 9999999998888898 8999999988766543    335443 22222222 223334443322  37


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++|+++|.
T Consensus        83 id~li~~Ag~   92 (247)
T 3lyl_A           83 IDILVNNAGI   92 (247)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=96.61  E-value=0.0064  Score=53.77  Aligned_cols=80  Identities=15%  Similarity=0.196  Sum_probs=52.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCC-EEEcCCCCC-ccHHHHHHHHcC--CCccE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVT-DFVNTSEHD-RPIQEVIAEMTN--GGVDR  268 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~~-~vv~~~~~~-~~~~~~i~~~~~--~g~Dv  268 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+. ++... ..+..+-.+ .++.+.+.....  +++|+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~   84 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV   84 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4678999988 9999999998888898 8999999988776543 33322 222222222 123333333222  37999


Q ss_pred             EEEccCC
Q 018072          269 SVECTGN  275 (361)
Q Consensus       269 vid~~g~  275 (361)
                      +|+++|.
T Consensus        85 lv~~Ag~   91 (260)
T 1nff_A           85 LVNNAGI   91 (260)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999873

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.61  E-value=0.0041  Score=57.98  Aligned_cols=48  Identities=25%  Similarity=0.338  Sum_probs=41.3

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHHcCCC
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE-EAKKFGVT  242 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~-~~~~~G~~  242 (361)
                      -.|.+|+|+|.|.+|..+++.+...|+ +|+++|++.++++ +++++|++
T Consensus       171 L~GktV~V~G~G~VG~~~A~~L~~~Ga-kVvv~D~~~~~l~~~a~~~ga~  219 (364)
T 1leh_A          171 LEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVAEEGAD  219 (364)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCCE
T ss_pred             CCcCEEEEECchHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE
Confidence            478999999999999999999999999 8999999998876 44556653

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=96.60  E-value=0.0065  Score=54.81  Aligned_cols=36  Identities=31%  Similarity=0.445  Sum_probs=32.2

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  230 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~  230 (361)
                      ...+|+|+|+|++|..+++.+.+.|..++..+|.+.
T Consensus        35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~   70 (292)
T 3h8v_A           35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK   70 (292)
T ss_dssp             GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence            346899999999999999999999999999998775

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=96.60  E-value=0.017  Score=51.84  Aligned_cols=75  Identities=25%  Similarity=0.283  Sum_probs=52.1

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCC----CEEEcCCCCCccHHHHHHHHcCCCccE
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGV----TDFVNTSEHDRPIQEVIAEMTNGGVDR  268 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~-~~~G~----~~vv~~~~~~~~~~~~i~~~~~~g~Dv  268 (361)
                      -.+.+++|+|+|++|.+++..+...|+.+|++++++.+|.+.+ ++++.    ..+......+  +.+.+.     .+|+
T Consensus       125 l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~--l~~~l~-----~~Di  197 (283)
T 3jyo_A          125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARG--IEDVIA-----AADG  197 (283)
T ss_dssp             CCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTT--HHHHHH-----HSSE
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHH--HHHHHh-----cCCE
Confidence            4578999999999999999999899997899999999887654 33321    1111111112  433332     4799


Q ss_pred             EEEccCC
Q 018072          269 SVECTGN  275 (361)
Q Consensus       269 vid~~g~  275 (361)
                      ||++++.
T Consensus       198 VInaTp~  204 (283)
T 3jyo_A          198 VVNATPM  204 (283)
T ss_dssp             EEECSST
T ss_pred             EEECCCC
Confidence            9999863

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=96.60  E-value=0.011  Score=53.81  Aligned_cols=88  Identities=16%  Similarity=0.252  Sum_probs=65.0

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      .|.+|.|+|.|.+|...++.++..|. +|++++++.++ +.+.++|+...      +  +.+.+.     ..|+|+.++.
T Consensus       141 ~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~~------~--l~ell~-----~aDvV~l~~p  205 (307)
T 1wwk_A          141 EGKTIGIIGFGRIGYQVAKIANALGM-NILLYDPYPNE-ERAKEVNGKFV------D--LETLLK-----ESDVVTIHVP  205 (307)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHTTCEEC------C--HHHHHH-----HCSEEEECCC
T ss_pred             CCceEEEEccCHHHHHHHHHHHHCCC-EEEEECCCCCh-hhHhhcCcccc------C--HHHHHh-----hCCEEEEecC
Confidence            57899999999999999999999998 99999998877 56667776421      1  333332     3688888876


Q ss_pred             ChH----HH-HHHHHHhcCCCcEEEEEcC
Q 018072          275 NID----NM-ISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       275 ~~~----~~-~~~~~~l~~~~G~iv~~g~  298 (361)
                      ...    .+ ...++.|+++ +.++.++.
T Consensus       206 ~~~~t~~li~~~~l~~mk~g-a~lin~ar  233 (307)
T 1wwk_A          206 LVESTYHLINEERLKLMKKT-AILINTSR  233 (307)
T ss_dssp             CSTTTTTCBCHHHHHHSCTT-CEEEECSC
T ss_pred             CChHHhhhcCHHHHhcCCCC-eEEEECCC
Confidence            422    12 3566788886 88888765

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=96.60  E-value=0.0085  Score=52.89  Aligned_cols=79  Identities=19%  Similarity=0.230  Sum_probs=52.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-EEcCCCCC-ccHHHHHHH---HcCC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHD-RPIQEVIAE---MTNG  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-vv~~~~~~-~~~~~~i~~---~~~~  264 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.    +.+... .+..+-.+ .++.+.+..   ..++
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   86 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG   86 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999988 9999999998888998 8999999987765432    234332 22222222 123333322   2225


Q ss_pred             CccEEEEccC
Q 018072          265 GVDRSVECTG  274 (361)
Q Consensus       265 g~Dvvid~~g  274 (361)
                      ++|++|+++|
T Consensus        87 ~id~lv~~Ag   96 (260)
T 2ae2_A           87 KLNILVNNAG   96 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999988

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=96.60  E-value=0.0055  Score=54.92  Aligned_cols=80  Identities=20%  Similarity=0.275  Sum_probs=54.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCEE-EcCCCCC-ccHHHHHHHHcC--CCccE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDF-VNTSEHD-RPIQEVIAEMTN--GGVDR  268 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~v-v~~~~~~-~~~~~~i~~~~~--~g~Dv  268 (361)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+.+ ++.... +..+-.+ .++.+.+.....  +++|+
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   82 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGA-RVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDT   82 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            4678999987 8999999998889999 99999999988776644 444332 2222222 123333333222  37999


Q ss_pred             EEEccCC
Q 018072          269 SVECTGN  275 (361)
Q Consensus       269 vid~~g~  275 (361)
                      +++++|.
T Consensus        83 lvnnAg~   89 (281)
T 3zv4_A           83 LIPNAGI   89 (281)
T ss_dssp             EECCCCC
T ss_pred             EEECCCc
Confidence            9999874

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.59  E-value=0.024  Score=48.98  Aligned_cols=119  Identities=17%  Similarity=0.051  Sum_probs=69.7

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChh-hHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK-RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  273 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~-~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~  273 (361)
                      .|.+|||+|+|.+|...++.+...|+ .|++++.+.. .++.+.+.+--..+...-.+.+       +  .++|+||-++
T Consensus        30 ~gk~VLVVGgG~va~~ka~~Ll~~GA-~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~d-------L--~~adLVIaAT   99 (223)
T 3dfz_A           30 KGRSVLVVGGGTIATRRIKGFLQEGA-AITVVAPTVSAEINEWEAKGQLRVKRKKVGEED-------L--LNVFFIVVAT   99 (223)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHGGGCC-CEEEECSSCCHHHHHHHHTTSCEEECSCCCGGG-------S--SSCSEEEECC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEECCCCCHHHHHHHHcCCcEEEECCCCHhH-------h--CCCCEEEECC
Confidence            46789999999999999999999999 7888865432 3333333332233322111100       1  2799999999


Q ss_pred             CChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecC
Q 018072          274 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN  325 (361)
Q Consensus       274 g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~  325 (361)
                      +.+.. ...+...+.. |..+.+-..+...++-++...-...+++-=+..|.
T Consensus       100 ~d~~~-N~~I~~~ak~-gi~VNvvD~p~~~~f~~Paiv~rg~l~iaIST~G~  149 (223)
T 3dfz_A          100 NDQAV-NKFVKQHIKN-DQLVNMASSFSDGNIQIPAQFSRGRLSLAISTDGA  149 (223)
T ss_dssp             CCTHH-HHHHHHHSCT-TCEEEC-----CCSEECCEEEEETTEEEEEECTTS
T ss_pred             CCHHH-HHHHHHHHhC-CCEEEEeCCcccCeEEEeeEEEeCCEEEEEECCCC
Confidence            98654 4444444556 88877755443445555433222566665454443

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=96.59  E-value=0.0062  Score=54.53  Aligned_cols=81  Identities=21%  Similarity=0.291  Sum_probs=52.4

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCEE-EcCCCCC-ccHHHHHHHHcC--C
Q 018072          194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDF-VNTSEHD-RPIQEVIAEMTN--G  264 (361)
Q Consensus       194 ~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~v-v~~~~~~-~~~~~~i~~~~~--~  264 (361)
                      ..+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.    +.|.... +..+-.+ .++.+.+.....  +
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  100 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGI-AVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFG  100 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            35789999988 9999999998888899 8999999988766543    2344332 2222222 123333333222  3


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      ++|++|+++|.
T Consensus       101 ~id~lv~nAg~  111 (279)
T 3sju_A          101 PIGILVNSAGR  111 (279)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCcEEEECCCC
Confidence            79999999874

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.58  E-value=0.013  Score=51.32  Aligned_cols=74  Identities=22%  Similarity=0.246  Sum_probs=51.1

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEc
Q 018072          194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  272 (361)
Q Consensus       194 ~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~  272 (361)
                      -.+.++||+|+ |++|...++.+...|+ +|++++++++..   ++++....+ .+- ..++.+.+....  ++|++|++
T Consensus        17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~---~~~~~~~~~-~D~-~~~~~~~~~~~~--~iD~lv~~   88 (249)
T 1o5i_A           17 IRDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEELL---KRSGHRYVV-CDL-RKDLDLLFEKVK--EVDILVLN   88 (249)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHH---HHTCSEEEE-CCT-TTCHHHHHHHSC--CCSEEEEC
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHH---HhhCCeEEE-eeH-HHHHHHHHHHhc--CCCEEEEC
Confidence            45789999988 9999999998888998 899999987543   344432222 211 222444444432  69999999


Q ss_pred             cCC
Q 018072          273 TGN  275 (361)
Q Consensus       273 ~g~  275 (361)
                      +|.
T Consensus        89 Ag~   91 (249)
T 1o5i_A           89 AGG   91 (249)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            873

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=96.58  E-value=0.0051  Score=54.33  Aligned_cols=80  Identities=23%  Similarity=0.262  Sum_probs=53.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCEE-EcCCCCC-ccHHHHHHHHcC--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDF-VNTSEHD-RPIQEVIAEMTN--GG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~v-v~~~~~~-~~~~~~i~~~~~--~g  265 (361)
                      .|.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.    +.+.... +..+-.+ ..+.+.+.....  ++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   89 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGK   89 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4688999987 9999999998888899 8999999988766543    3454332 2222222 123333333222  37


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++++++|.
T Consensus        90 id~lv~nAg~   99 (256)
T 3gaf_A           90 ITVLVNNAGG   99 (256)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=96.57  E-value=0.022  Score=51.14  Aligned_cols=80  Identities=19%  Similarity=0.139  Sum_probs=52.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEc-CChhhHHHHH-----HcCCCE-E--EcCCCCCc------------
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD-RSSKRFEEAK-----KFGVTD-F--VNTSEHDR------------  252 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~-~~~~~~~~~~-----~~G~~~-v--v~~~~~~~------------  252 (361)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.++ +++++.+.+.     +.+... .  .|..+.+.            
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   86 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV   86 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCB
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccccccc
Confidence            4678999987 9999999999888999 899998 8887765442     234332 2  23222220            


Q ss_pred             ----cHHHHHHHHcC--CCccEEEEccCC
Q 018072          253 ----PIQEVIAEMTN--GGVDRSVECTGN  275 (361)
Q Consensus       253 ----~~~~~i~~~~~--~g~Dvvid~~g~  275 (361)
                          .+.+.+.....  +++|++|+++|.
T Consensus        87 ~~~~~v~~~~~~~~~~~g~iD~lvnnAg~  115 (291)
T 1e7w_A           87 TLFTRCAELVAACYTHWGRCDVLVNNASS  115 (291)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred             chHHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence                24444433322  379999999973

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=96.57  E-value=0.0096  Score=53.01  Aligned_cols=80  Identities=20%  Similarity=0.257  Sum_probs=53.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-EEcCCCCC-ccHHHHHH---HHcCC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHD-RPIQEVIA---EMTNG  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-vv~~~~~~-~~~~~~i~---~~~~~  264 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++++.+.    +.+... .+..+-.+ .++.+.+.   +..++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   98 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG   98 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999988 9999999999888998 8999999987765432    234432 22222222 12322222   22225


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      ++|++|+++|.
T Consensus        99 ~id~lv~nAg~  109 (273)
T 1ae1_A           99 KLNILVNNAGV  109 (273)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCcEEEECCCC
Confidence            79999999874

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=96.57  E-value=0.0062  Score=55.05  Aligned_cols=80  Identities=21%  Similarity=0.224  Sum_probs=52.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCC-C-EEEcCCCCC-ccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGV-T-DFVNTSEHD-RPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~-~-~vv~~~~~~-~~~~~~i~~~~~--~  264 (361)
                      .|.++||+|+ |++|...++.+...|+ +|+.+++++++++.+.+    .+. . ..+..+-.+ ..+.+.+.....  +
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  118 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGA-NVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFG  118 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            4678999988 8999999999889999 89999999887655432    231 2 222222222 123333333222  3


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      ++|++|+++|.
T Consensus       119 ~iD~lvnnAg~  129 (293)
T 3rih_A          119 ALDVVCANAGI  129 (293)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            78999999873

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=96.56  E-value=0.0053  Score=54.14  Aligned_cols=80  Identities=24%  Similarity=0.357  Sum_probs=48.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCCE-EEcCCCCC-ccHHHHHHHHcC--CCccE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD-FVNTSEHD-RPIQEVIAEMTN--GGVDR  268 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g~Dv  268 (361)
                      .|.++||+|+ +++|...++.+...|+ +|+++++++++.+.+. +++... .+..+-.+ .++.+.+.....  +++|+
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   84 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGA-TVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHG   84 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4678999988 8999999998889999 8999999887765543 344322 22222222 123333333222  37999


Q ss_pred             EEEccCC
Q 018072          269 SVECTGN  275 (361)
Q Consensus       269 vid~~g~  275 (361)
                      +|+++|.
T Consensus        85 lv~nAg~   91 (257)
T 3tpc_A           85 LVNCAGT   91 (257)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999874

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=96.56  E-value=0.0056  Score=54.77  Aligned_cols=97  Identities=13%  Similarity=0.093  Sum_probs=62.6

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 018072          198 SVAVFGL-GAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  275 (361)
Q Consensus       198 ~VlI~G~-g~vG~~a~~~a~~~-g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~  275 (361)
                      +|||+|+ |.+|...++.+... |. +|+++.+++++.+.+...++.. +..+-.+  . +.+..... ++|+||++++.
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~-~V~~~~R~~~~~~~~~~~~v~~-~~~D~~d--~-~~l~~~~~-~~d~vi~~a~~   75 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHID-HFHIGVRNVEKVPDDWRGKVSV-RQLDYFN--Q-ESMVEAFK-GMDTVVFIPSI   75 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCT-TEEEEESSGGGSCGGGBTTBEE-EECCTTC--H-HHHHHHTT-TCSEEEECCCC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCC-cEEEEECCHHHHHHhhhCCCEE-EEcCCCC--H-HHHHHHHh-CCCEEEEeCCC
Confidence            5899998 99999999888777 77 8999999988765544444433 2222222  1 23444333 79999999875


Q ss_pred             h-------HHHHHHHHHhcCCC-cEEEEEcCCC
Q 018072          276 I-------DNMISAFECVHDGW-GVAVLVGVPS  300 (361)
Q Consensus       276 ~-------~~~~~~~~~l~~~~-G~iv~~g~~~  300 (361)
                      .       ......++.++..+ ++++.++...
T Consensus        76 ~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~  108 (289)
T 3e48_A           76 IHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYA  108 (289)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred             CccchhhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence            2       12334555555441 4788887654

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=96.56  E-value=0.0062  Score=53.73  Aligned_cols=80  Identities=29%  Similarity=0.381  Sum_probs=53.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCCCE-EEcCCCCC-ccHHHHHHHHcC--CCccE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTD-FVNTSEHD-RPIQEVIAEMTN--GGVDR  268 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~-~~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g~Dv  268 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+ ++++... .+..+-.+ ..+.+.+.....  +++|+
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   89 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV   89 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            4678999988 9999999998888998 899999988766554 3455432 22222222 123333332221  37999


Q ss_pred             EEEccCC
Q 018072          269 SVECTGN  275 (361)
Q Consensus       269 vid~~g~  275 (361)
                      +|+++|.
T Consensus        90 li~~Ag~   96 (265)
T 2o23_A           90 AVNCAGI   96 (265)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9999873

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=96.56  E-value=0.0072  Score=53.58  Aligned_cols=80  Identities=21%  Similarity=0.188  Sum_probs=52.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-----cCCC-E-EEcCCCCC-ccHHHHHHHHcC--
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVT-D-FVNTSEHD-RPIQEVIAEMTN--  263 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-----~G~~-~-vv~~~~~~-~~~~~~i~~~~~--  263 (361)
                      .+.++||+|+ +++|...++.+...|+ +|+.+++++++.+.+.+     .+.. . .+..+-.+ .++.+.+.....  
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTL   85 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            4678999987 8999999998888999 89999999887665432     3332 2 22222222 123333333222  


Q ss_pred             CCccEEEEccCC
Q 018072          264 GGVDRSVECTGN  275 (361)
Q Consensus       264 ~g~Dvvid~~g~  275 (361)
                      +++|++++++|.
T Consensus        86 g~id~lvnnAg~   97 (265)
T 3lf2_A           86 GCASILVNNAGQ   97 (265)
T ss_dssp             CSCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999984

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=96.56  E-value=0.01  Score=53.19  Aligned_cols=80  Identities=21%  Similarity=0.245  Sum_probs=51.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-EEcCCCCC-ccHHHHHHHHc--CCC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHD-RPIQEVIAEMT--NGG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-vv~~~~~~-~~~~~~i~~~~--~~g  265 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.    +.+... .+..+-.+ ..+.+.+....  .++
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~  121 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKN  121 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            3678999988 9999999988888898 8888988877665432    235432 22222222 22333333322  237


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++|+++|.
T Consensus       122 id~li~~Ag~  131 (285)
T 2c07_A          122 VDILVNNAGI  131 (285)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=96.55  E-value=0.0071  Score=53.64  Aligned_cols=105  Identities=15%  Similarity=0.104  Sum_probs=66.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH---HHcCCCE-EEcCCCCC-ccHHHHHHHHcC--CCc
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA---KKFGVTD-FVNTSEHD-RPIQEVIAEMTN--GGV  266 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~---~~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g~  266 (361)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+   .+.+... .+..+-.+ .++.+.+.+...  +++
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~i   84 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERA-IPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRL   84 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            4788999987 8999999998889999 899998887654443   3344432 22222222 223333333322  379


Q ss_pred             cEEEEccCC---------hHH---------------HHHHHHHhcCCCcEEEEEcCCC
Q 018072          267 DRSVECTGN---------IDN---------------MISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       267 Dvvid~~g~---------~~~---------------~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      |++++++|.         .+.               ...+++.|+..+|+++.++...
T Consensus        85 DiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~  142 (258)
T 4gkb_A           85 DGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKT  142 (258)
T ss_dssp             CEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTH
T ss_pred             CEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehh
Confidence            999999974         111               2345556654339999997543

>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*

Probab=96.55  E-value=0.0049  Score=55.38  Aligned_cols=96  Identities=19%  Similarity=0.218  Sum_probs=65.4

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc-----CC--------CEEEcCCCCCccHHHHHHH
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-----GV--------TDFVNTSEHDRPIQEVIAE  260 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~-----G~--------~~vv~~~~~~~~~~~~i~~  260 (361)
                      ..+.+||++|+|. |..+..+++. +..+|++++.+++..+.+++.     +.        +.-+.....+  ..+.+..
T Consensus        74 ~~~~~VLdiG~G~-G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D--~~~~l~~  149 (281)
T 1mjf_A           74 PKPKRVLVIGGGD-GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGD--GFEFIKN  149 (281)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESC--HHHHHHH
T ss_pred             CCCCeEEEEcCCc-CHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECc--hHHHhcc
Confidence            4568999998865 6667777776 766999999999999888763     21        1101111122  3334433


Q ss_pred             HcCCCccEEEEccC----------ChHHHHHHHHHhcCCCcEEEEE
Q 018072          261 MTNGGVDRSVECTG----------NIDNMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       261 ~~~~g~Dvvid~~g----------~~~~~~~~~~~l~~~~G~iv~~  296 (361)
                        ++.||+|+-...          ..+.+..+.+.|+++ |.++..
T Consensus       150 --~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pg-G~lv~~  192 (281)
T 1mjf_A          150 --NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNP-GIYVTQ  192 (281)
T ss_dssp             --CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEE-EEEEEE
T ss_pred             --cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEE
Confidence              458999986543          245678899999997 998875

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=96.55  E-value=0.0067  Score=53.92  Aligned_cols=80  Identities=23%  Similarity=0.304  Sum_probs=53.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCEE-EcCCCCC-ccHHHHHHHHcC--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDF-VNTSEHD-RPIQEVIAEMTN--GG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~v-v~~~~~~-~~~~~~i~~~~~--~g  265 (361)
                      .+.++||+|+ |++|.+.++.+...|+ +|+.+++++++++.+.    +.+.... +..+-.+ .++.+.+.....  ++
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   81 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGA-KILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR   81 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            3678999988 8999999998889999 8999999988766543    2354332 2222222 123333333322  37


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++++++|.
T Consensus        82 iD~lVnnAG~   91 (264)
T 3tfo_A           82 IDVLVNNAGV   91 (264)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.55  E-value=0.0066  Score=52.74  Aligned_cols=97  Identities=23%  Similarity=0.277  Sum_probs=60.3

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCC-ccHHHHHH---HHcC-CCccEE
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD-RPIQEVIA---EMTN-GGVDRS  269 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~-~~~~~~i~---~~~~-~g~Dvv  269 (361)
                      +.++||+|+ |++|...++.+...|+ +|+++++++++.+     +....+..+-.+ ..+.+.+.   +..+ +++|++
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~l   76 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQA-----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   76 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTS-----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecCccccc-----cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence            568999988 9999999999988998 8999999876532     111121111111 11222222   2222 479999


Q ss_pred             EEccCCh-------H----H---------------HHHHHHHhcCCCcEEEEEcCC
Q 018072          270 VECTGNI-------D----N---------------MISAFECVHDGWGVAVLVGVP  299 (361)
Q Consensus       270 id~~g~~-------~----~---------------~~~~~~~l~~~~G~iv~~g~~  299 (361)
                      |+++|..       +    .               .+.+.+.+.+. |+++.++..
T Consensus        77 v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS~  131 (236)
T 1ooe_A           77 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG-GLLQLTGAA  131 (236)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCG
T ss_pred             EECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccC-CEEEEECch
Confidence            9999831       1    1               23445556566 899998754

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=96.55  E-value=0.0061  Score=51.27  Aligned_cols=97  Identities=18%  Similarity=0.189  Sum_probs=59.7

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 018072          197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  275 (361)
Q Consensus       197 ~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~  275 (361)
                      .+|+|+|+ |.+|...++.+...|. +|+++++++++.+.....+. .++..+-.+  . +.+.+... ++|+||++++.
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~--~-~~~~~~~~-~~d~vi~~a~~   77 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGPRPA-HVVVGDVLQ--A-ADVDKTVA-GQDAVIVLLGT   77 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSCCCS-EEEESCTTS--H-HHHHHHHT-TCSEEEECCCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeChhhcccccCCce-EEEEecCCC--H-HHHHHHHc-CCCEEEECccC
Confidence            68999998 9999999998888897 99999998876533211122 222222222  1 23333332 58999999885


Q ss_pred             hH----------HHHHHHHHhcCC-CcEEEEEcCC
Q 018072          276 ID----------NMISAFECVHDG-WGVAVLVGVP  299 (361)
Q Consensus       276 ~~----------~~~~~~~~l~~~-~G~iv~~g~~  299 (361)
                      ..          .....++.+... -++++.++..
T Consensus        78 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~  112 (206)
T 1hdo_A           78 RNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSA  112 (206)
T ss_dssp             TTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCG
T ss_pred             CCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeee
Confidence            32          123333333322 1588888654

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=96.54  E-value=0.0064  Score=50.38  Aligned_cols=100  Identities=18%  Similarity=0.269  Sum_probs=69.0

Q ss_pred             hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCC-CEEEcCCCCCccHHHHHHHHc
Q 018072          188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGV-TDFVNTSEHDRPIQEVIAEMT  262 (361)
Q Consensus       188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~-~~vv~~~~~~~~~~~~i~~~~  262 (361)
                      .....+.++++||-+|+|. |..+..+++.. . +|+++|.+++..+.+++    .+. ..+ .....+  +.+.   +.
T Consensus        26 ~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~-~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~-~~~~~d--~~~~---~~   96 (192)
T 1l3i_A           26 MCLAEPGKNDVAVDVGCGT-GGVTLELAGRV-R-RVYAIDRNPEAISTTEMNLQRHGLGDNV-TLMEGD--APEA---LC   96 (192)
T ss_dssp             HHHHCCCTTCEEEEESCTT-SHHHHHHHTTS-S-EEEEEESCHHHHHHHHHHHHHTTCCTTE-EEEESC--HHHH---HT
T ss_pred             HHhcCCCCCCEEEEECCCC-CHHHHHHHHhc-C-EEEEEECCHHHHHHHHHHHHHcCCCcce-EEEecC--HHHh---cc
Confidence            4456788999999999977 88888877765 4 99999999998888765    444 111 111122  3322   22


Q ss_pred             C-CCccEEEEccC---ChHHHHHHHHHhcCCCcEEEEEc
Q 018072          263 N-GGVDRSVECTG---NIDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       263 ~-~g~Dvvid~~g---~~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      . +.+|+|+....   -...+..+.+.|+++ |++++..
T Consensus        97 ~~~~~D~v~~~~~~~~~~~~l~~~~~~l~~g-G~l~~~~  134 (192)
T 1l3i_A           97 KIPDIDIAVVGGSGGELQEILRIIKDKLKPG-GRIIVTA  134 (192)
T ss_dssp             TSCCEEEEEESCCTTCHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             cCCCCCEEEECCchHHHHHHHHHHHHhcCCC-cEEEEEe
Confidence            2 37999997643   135677888889997 9988764

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=96.53  E-value=0.0057  Score=53.15  Aligned_cols=102  Identities=18%  Similarity=0.142  Sum_probs=69.6

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcC---
Q 018072          192 KPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN---  263 (361)
Q Consensus       192 ~~~~g~~VlI~G~g~vG~~a~~~a~~~g-~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~---  263 (361)
                      ...++.+||-+|+| .|..++.+++..+ ..+|+++|.+++..+.+++    .|....+.....+  ..+.+..+..   
T Consensus        69 ~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d--~~~~l~~l~~~~~  145 (232)
T 3cbg_A           69 SLTGAKQVLEIGVF-RGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGP--ALATLEQLTQGKP  145 (232)
T ss_dssp             HHHTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESC--HHHHHHHHHTSSS
T ss_pred             HhcCCCEEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC--HHHHHHHHHhcCC
Confidence            34567899999998 5888889998764 2399999999998888765    3553212222222  4444444432   


Q ss_pred             -CCccEEEEccCC---hHHHHHHHHHhcCCCcEEEEEc
Q 018072          264 -GGVDRSVECTGN---IDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       264 -~g~Dvvid~~g~---~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                       +.||+||-....   ...++.+.+.|+++ |.++.-.
T Consensus       146 ~~~fD~V~~d~~~~~~~~~l~~~~~~Lkpg-G~lv~~~  182 (232)
T 3cbg_A          146 LPEFDLIFIDADKRNYPRYYEIGLNLLRRG-GLMVIDN  182 (232)
T ss_dssp             CCCEEEEEECSCGGGHHHHHHHHHHTEEEE-EEEEEEC
T ss_pred             CCCcCEEEECCCHHHHHHHHHHHHHHcCCC-eEEEEeC
Confidence             479999955432   24578888999997 9988754

>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*

Probab=96.52  E-value=0.01  Score=52.23  Aligned_cols=102  Identities=19%  Similarity=0.197  Sum_probs=68.3

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHc----
Q 018072          192 KPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT----  262 (361)
Q Consensus       192 ~~~~g~~VlI~G~g~vG~~a~~~a~~~g-~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~----  262 (361)
                      ...++.+||-+|+|. |..++.+|+.+. ..+|+++|.+++..+.+++    .|...-+.....+  ..+.+..+.    
T Consensus        76 ~~~~~~~VLeiG~G~-G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gd--a~~~l~~l~~~~~  152 (247)
T 1sui_A           76 KLINAKNTMEIGVYT-GYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGP--ALPVLDEMIKDEK  152 (247)
T ss_dssp             HHTTCCEEEEECCGG-GHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESC--HHHHHHHHHHSGG
T ss_pred             HhhCcCEEEEeCCCc-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECC--HHHHHHHHHhccC
Confidence            345678999999865 778888888863 2399999999998887765    4553212222222  333343332    


Q ss_pred             -CCCccEEEEccCC---hHHHHHHHHHhcCCCcEEEEEc
Q 018072          263 -NGGVDRSVECTGN---IDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       263 -~~g~Dvvid~~g~---~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                       .+.||+||-....   ...++.+.+.|+++ |.++.-.
T Consensus       153 ~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpG-G~lv~d~  190 (247)
T 1sui_A          153 NHGSYDFIFVDADKDNYLNYHKRLIDLVKVG-GVIGYDN  190 (247)
T ss_dssp             GTTCBSEEEECSCSTTHHHHHHHHHHHBCTT-CCEEEEC
T ss_pred             CCCCEEEEEEcCchHHHHHHHHHHHHhCCCC-eEEEEec
Confidence             3479999965433   34677889999997 9987654

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=96.52  E-value=0.011  Score=52.13  Aligned_cols=74  Identities=26%  Similarity=0.246  Sum_probs=49.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCC-ccHHHHHHHHc--CCCccEEE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD-RPIQEVIAEMT--NGGVDRSV  270 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~-~~~~~~i~~~~--~~g~Dvvi  270 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.      ...+..+-.+ ..+.+.+....  -+.+|++|
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~------~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv   92 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGD-KVAITYRSGEPPEG------FLAVKCDITDTEQVEQAYKEIEETHGPVEVLI   92 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTT------SEEEECCTTSHHHHHHHHHHHHHHTCSCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHhhcc------ceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            3678999988 9999999998888998 89999888765432      1222222222 12333333322  23689999


Q ss_pred             EccCC
Q 018072          271 ECTGN  275 (361)
Q Consensus       271 d~~g~  275 (361)
                      +++|.
T Consensus        93 ~nAg~   97 (253)
T 2nm0_A           93 ANAGV   97 (253)
T ss_dssp             EECSC
T ss_pred             ECCCC
Confidence            99874

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=96.52  E-value=0.01  Score=55.37  Aligned_cols=93  Identities=17%  Similarity=0.164  Sum_probs=63.1

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 018072          197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  276 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~  276 (361)
                      -+|+|+|+|.+|..+++.+.. .. .|.+.+++.++++.+++......+|..+    . +.+.++.. +.|+|+++++..
T Consensus        17 mkilvlGaG~vG~~~~~~L~~-~~-~v~~~~~~~~~~~~~~~~~~~~~~d~~d----~-~~l~~~~~-~~DvVi~~~p~~   88 (365)
T 3abi_A           17 MKVLILGAGNIGRAIAWDLKD-EF-DVYIGDVNNENLEKVKEFATPLKVDASN----F-DKLVEVMK-EFELVIGALPGF   88 (365)
T ss_dssp             CEEEEECCSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHTTTSEEEECCTTC----H-HHHHHHHT-TCSEEEECCCGG
T ss_pred             cEEEEECCCHHHHHHHHHHhc-CC-CeEEEEcCHHHHHHHhccCCcEEEecCC----H-HHHHHHHh-CCCEEEEecCCc
Confidence            479999999999998887743 34 7899999999998887654333333322    2 23444333 589999999875


Q ss_pred             HHHHHHHHHhcCCCcEEEEEcC
Q 018072          277 DNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       277 ~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      .....+-.++..+ -.++.+..
T Consensus        89 ~~~~v~~~~~~~g-~~yvD~s~  109 (365)
T 3abi_A           89 LGFKSIKAAIKSK-VDMVDVSF  109 (365)
T ss_dssp             GHHHHHHHHHHHT-CEEEECCC
T ss_pred             ccchHHHHHHhcC-cceEeeec
Confidence            4555555666664 55666543

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=96.51  E-value=0.008  Score=53.70  Aligned_cols=80  Identities=21%  Similarity=0.292  Sum_probs=52.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCE-EEcCCCCC-ccHHHHHHHHc--CCC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMT--NGG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~-vv~~~~~~-~~~~~~i~~~~--~~g  265 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+    ++.|... .+..+-.+ .++.+.+....  -++
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   99 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGP   99 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            4678999988 9999999998888998 899999998776543    2235432 22222222 12333333322  137


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++|+++|.
T Consensus       100 iD~lv~~Ag~  109 (277)
T 2rhc_B          100 VDVLVNNAGR  109 (277)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=96.51  E-value=0.015  Score=52.21  Aligned_cols=80  Identities=18%  Similarity=0.158  Sum_probs=51.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHHH-----HcCCCE-E--EcCCCC---CccHHHHHHHH
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS-KRFEEAK-----KFGVTD-F--VNTSEH---DRPIQEVIAEM  261 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~-~~~~~~~-----~~G~~~-v--v~~~~~---~~~~~~~i~~~  261 (361)
                      .+.++||+|+ |++|.+.++.+...|+ +|+++++++ ++.+.+.     +.+... .  .|..+.   ...+.+.+...
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~  100 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGY-RVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSC  100 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHH
Confidence            3678999988 9999999998888898 899998987 6654432     234332 2  222221   11233333322


Q ss_pred             cC--CCccEEEEccCC
Q 018072          262 TN--GGVDRSVECTGN  275 (361)
Q Consensus       262 ~~--~g~Dvvid~~g~  275 (361)
                      ..  +++|++|+++|.
T Consensus       101 ~~~~g~iD~lvnnAG~  116 (288)
T 2x9g_A          101 FRAFGRCDVLVNNASA  116 (288)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHhcCCCCEEEECCCC
Confidence            21  379999999873

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=96.51  E-value=0.0083  Score=52.72  Aligned_cols=79  Identities=27%  Similarity=0.319  Sum_probs=52.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMTN--GG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g  265 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+    ++.+... .+..+-.+ .++.+.+.....  ++
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   90 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGA-RVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGR   90 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4678999988 9999999998888898 899999998765443    2234432 22222222 123333333221  37


Q ss_pred             ccEEEEccC
Q 018072          266 VDRSVECTG  274 (361)
Q Consensus       266 ~Dvvid~~g  274 (361)
                      +|++|+++|
T Consensus        91 id~vi~~Ag   99 (260)
T 3awd_A           91 VDILVACAG   99 (260)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=96.50  E-value=0.0028  Score=54.77  Aligned_cols=97  Identities=14%  Similarity=0.183  Sum_probs=68.1

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcCC------CeEEEEcCChhhHHHHHHc----C-----CCEE-EcCCCCCccHH
Q 018072          192 KPERGSSVAVFGLGAVGLAAAEGARIAGA------SRIIGVDRSSKRFEEAKKF----G-----VTDF-VNTSEHDRPIQ  255 (361)
Q Consensus       192 ~~~~g~~VlI~G~g~vG~~a~~~a~~~g~------~~Vi~~~~~~~~~~~~~~~----G-----~~~v-v~~~~~~~~~~  255 (361)
                      .++++++||-+|+|. |..+..+++..+.      .+|+++|.+++..+.+++.    +     ...+ +...+..    
T Consensus        81 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~----  155 (227)
T 1r18_A           81 HLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGR----  155 (227)
T ss_dssp             TCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGG----
T ss_pred             hCCCCCEEEEECCCc-cHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcc----
Confidence            578999999999986 8888888887652      3899999999988877542    2     1111 1111111    


Q ss_pred             HHHHHHcC-CCccEEEEccCChHHHHHHHHHhcCCCcEEEEEc
Q 018072          256 EVIAEMTN-GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       256 ~~i~~~~~-~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      +   .+.. +.||+|+....-......+.+.|+++ |++++.-
T Consensus       156 ~---~~~~~~~fD~I~~~~~~~~~~~~~~~~Lkpg-G~lvi~~  194 (227)
T 1r18_A          156 K---GYPPNAPYNAIHVGAAAPDTPTELINQLASG-GRLIVPV  194 (227)
T ss_dssp             G---CCGGGCSEEEEEECSCBSSCCHHHHHTEEEE-EEEEEEE
T ss_pred             c---CCCcCCCccEEEECCchHHHHHHHHHHhcCC-CEEEEEE
Confidence            0   1122 37999998877666778899999997 9987653

>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1

Probab=96.50  E-value=0.0087  Score=54.61  Aligned_cols=91  Identities=16%  Similarity=0.143  Sum_probs=62.5

Q ss_pred             CEEEEEcCCHHHHHHHHHHHH-c-CCCeEEEEcCChhh--HHHHHHcCCCEEEcCCCCCccHHHHHHHHcC-CCccEEEE
Q 018072          197 SSVAVFGLGAVGLAAAEGARI-A-GASRIIGVDRSSKR--FEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN-GGVDRSVE  271 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~-~-g~~~Vi~~~~~~~~--~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~-~g~Dvvid  271 (361)
                      -+|.|+|+|.+|...+..+.. . +.+.+.++++++++  ++.++++|.....     + ++.+.+ +.++ .++|+||+
T Consensus         5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~-----~-~~e~ll-~~~~~~~iDvV~~   77 (312)
T 1nvm_B            5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY-----A-GVEGLI-KLPEFADIDFVFD   77 (312)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES-----S-HHHHHH-HSGGGGGEEEEEE
T ss_pred             CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCccc-----C-CHHHHH-hccCCCCCcEEEE
Confidence            479999999999988887744 3 55455667777666  5667788875321     1 133332 2222 37999999


Q ss_pred             ccCChHHHHHHHHHhcC--CCcEEEE
Q 018072          272 CTGNIDNMISAFECVHD--GWGVAVL  295 (361)
Q Consensus       272 ~~g~~~~~~~~~~~l~~--~~G~iv~  295 (361)
                      +++.....+.+...+..  + ..++.
T Consensus        78 atp~~~h~~~a~~al~a~~G-k~Vi~  102 (312)
T 1nvm_B           78 ATSASAHVQNEALLRQAKPG-IRLID  102 (312)
T ss_dssp             CSCHHHHHHHHHHHHHHCTT-CEEEE
T ss_pred             CCChHHHHHHHHHHHHhCCC-CEEEE
Confidence            99986777888888886  6 55555

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=96.49  E-value=0.0085  Score=52.18  Aligned_cols=80  Identities=26%  Similarity=0.327  Sum_probs=52.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-----cCCCE-EEcCCCCC-ccHHHHHHHHc--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVTD-FVNTSEHD-RPIQEVIAEMT--NG  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-----~G~~~-vv~~~~~~-~~~~~~i~~~~--~~  264 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.+     .+... .+..+-.+ ..+.+.+....  -+
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGS-TVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVD   84 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            4678999988 9999999998888998 89999999877655432     34432 22222222 12333333322  13


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      ++|++|+++|.
T Consensus        85 ~~d~vi~~Ag~   95 (248)
T 2pnf_A           85 GIDILVNNAGI   95 (248)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=96.49  E-value=0.008  Score=51.42  Aligned_cols=96  Identities=15%  Similarity=0.168  Sum_probs=61.4

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 018072          198 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  276 (361)
Q Consensus       198 ~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~  276 (361)
                      +|||+|+ |.+|...++.+...|. +|+++++++++.+.+  .++ .++..+-.+  ..+.+.+... ++|+||+++|..
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~--~~~-~~~~~D~~d--~~~~~~~~~~-~~d~vi~~ag~~   74 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDY-QIYAGARKVEQVPQY--NNV-KAVHFDVDW--TPEEMAKQLH-GMDAIINVSGSG   74 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSC-EEEEEESSGGGSCCC--TTE-EEEECCTTS--CHHHHHTTTT-TCSEEEECCCCT
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCccchhhc--CCc-eEEEecccC--CHHHHHHHHc-CCCEEEECCcCC
Confidence            6899997 9999999999988898 999999998765432  122 222222222  1234444333 699999999853


Q ss_pred             H---------HHHHHHHHhcCCC-cEEEEEcCCC
Q 018072          277 D---------NMISAFECVHDGW-GVAVLVGVPS  300 (361)
Q Consensus       277 ~---------~~~~~~~~l~~~~-G~iv~~g~~~  300 (361)
                      .         .....++.++..+ ++++.++...
T Consensus        75 ~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~  108 (219)
T 3dqp_A           75 GKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIF  108 (219)
T ss_dssp             TSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred             CCCcEeEeHHHHHHHHHHHHHhCCCEEEEECccc
Confidence            2         1233444444331 5899888654

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=96.49  E-value=0.0041  Score=54.76  Aligned_cols=75  Identities=23%  Similarity=0.271  Sum_probs=53.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCh--hhHHHHHHcCCCEEE---cCCCCCccHHHHHHHHc-CCCcc
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS--KRFEEAKKFGVTDFV---NTSEHDRPIQEVIAEMT-NGGVD  267 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~--~~~~~~~~~G~~~vv---~~~~~~~~~~~~i~~~~-~~g~D  267 (361)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++  +..+.+++.|.....   |..+.+     .++... .+++|
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~-----~v~~~~~~g~iD   81 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGA-EVVCAARRAPDETLDIIAKDGGNASALLIDFADPL-----AAKDSFTDAGFD   81 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTT-----TTTTSSTTTCCC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCC-EEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHH-----HHHHHHHhCCCC
Confidence            4788899987 8999999999999999 899888875  456666777765432   222222     122222 24899


Q ss_pred             EEEEccCC
Q 018072          268 RSVECTGN  275 (361)
Q Consensus       268 vvid~~g~  275 (361)
                      +.++++|.
T Consensus        82 iLVNNAGi   89 (247)
T 4hp8_A           82 ILVNNAGI   89 (247)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999884

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=96.48  E-value=0.016  Score=50.43  Aligned_cols=80  Identities=20%  Similarity=0.285  Sum_probs=49.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEE-cCChhhHHHH----HHcCCCE-EEcCCCCC-ccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~-~~~~~~~~~~----~~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~  264 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++ .+++++.+.+    ++.+... .+..+-.+ ..+.+.+.....  +
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~-~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGA-NIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFG   82 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            3678999988 9999999998888998 88888 6666554433    3335432 22222222 123333332221  3


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      ++|++|+++|.
T Consensus        83 ~~d~vi~~Ag~   93 (247)
T 2hq1_A           83 RIDILVNNAGI   93 (247)
T ss_dssp             CCCEEEECC--
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=96.48  E-value=0.0066  Score=53.59  Aligned_cols=80  Identities=20%  Similarity=0.232  Sum_probs=52.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCEE-EcCCCCC-ccHHHHHHHHcC--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF-VNTSEHD-RPIQEVIAEMTN--GG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~v-v~~~~~~-~~~~~~i~~~~~--~g  265 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+    ++.+.... +..+-.+ .++.+.+.....  ++
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   91 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGA-HVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGG   91 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4678999988 9999999998888998 899999998776543    22344322 2222222 123333332221  37


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++|+++|.
T Consensus        92 iD~lv~~Ag~  101 (260)
T 2zat_A           92 VDILVSNAAV  101 (260)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=96.48  E-value=0.0086  Score=53.68  Aligned_cols=80  Identities=21%  Similarity=0.277  Sum_probs=53.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-c---CCCEEEcC-CCCC-ccHHHHHHHHcC--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F---GVTDFVNT-SEHD-RPIQEVIAEMTN--GG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~---G~~~vv~~-~~~~-~~~~~~i~~~~~--~g  265 (361)
                      .|.++||+|+ |++|...++.+...|+ +|+.+++++++++.+.+ +   +....... +-.+ ..+.+.+.....  ++
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   85 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGA-KVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGG   85 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999988 8999999998888999 89999999887766543 2   33332221 2122 123333333222  37


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++|+++|.
T Consensus        86 iD~lvnnAg~   95 (280)
T 3tox_A           86 LDTAFNNAGA   95 (280)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999883

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=96.48  E-value=0.0039  Score=54.06  Aligned_cols=103  Identities=18%  Similarity=0.207  Sum_probs=69.2

Q ss_pred             hhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCC--CEE-EcCCCCCccHHHHHHHHcCCC
Q 018072          189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--TDF-VNTSEHDRPIQEVIAEMTNGG  265 (361)
Q Consensus       189 ~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~--~~v-v~~~~~~~~~~~~i~~~~~~g  265 (361)
                      +...++++++||-+|+|. |..+..+++..|..+|+++|.+++.++.+++.-.  ..+ +...+... .... ..+ .+.
T Consensus        68 ~~~~~~~~~~VLDlGcG~-G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~-~~~~-~~~-~~~  143 (230)
T 1fbn_A           68 KVMPIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANK-PQEY-ANI-VEK  143 (230)
T ss_dssp             CCCCCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTC-GGGG-TTT-SCC
T ss_pred             cccCCCCCCEEEEEcccC-CHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCC-cccc-ccc-Ccc
Confidence            445678999999999987 8888889988774599999999998887765321  111 11111110 0000 011 147


Q ss_pred             ccEEEEccCCh---H-HHHHHHHHhcCCCcEEEEE
Q 018072          266 VDRSVECTGNI---D-NMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       266 ~Dvvid~~g~~---~-~~~~~~~~l~~~~G~iv~~  296 (361)
                      +|+|+..+..+   . .+..+.+.|+++ |++++.
T Consensus       144 ~D~v~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~  177 (230)
T 1fbn_A          144 VDVIYEDVAQPNQAEILIKNAKWFLKKG-GYGMIA  177 (230)
T ss_dssp             EEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             EEEEEEecCChhHHHHHHHHHHHhCCCC-cEEEEE
Confidence            99999776654   3 477888899997 998886

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=96.48  E-value=0.0087  Score=53.30  Aligned_cols=79  Identities=29%  Similarity=0.400  Sum_probs=50.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHD-RPIQEVIAEMTN--GG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g  265 (361)
                      .+.++||+|+ |++|...+..+...|+ +|+++++++++.+.+.    +.+... .+..+-.+ ..+.+.+.....  +.
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  111 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGA-DVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGT  111 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTC-EEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            3678999987 9999998888888898 8999988876554432    235432 22222222 123333333221  36


Q ss_pred             ccEEEEccC
Q 018072          266 VDRSVECTG  274 (361)
Q Consensus       266 ~Dvvid~~g  274 (361)
                      +|++|+++|
T Consensus       112 id~li~~Ag  120 (279)
T 3ctm_A          112 IDVFVANAG  120 (279)
T ss_dssp             CSEEEECGG
T ss_pred             CCEEEECCc
Confidence            899999987

>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0

Probab=96.47  E-value=0.0035  Score=53.91  Aligned_cols=102  Identities=17%  Similarity=0.128  Sum_probs=69.0

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcC---
Q 018072          192 KPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN---  263 (361)
Q Consensus       192 ~~~~g~~VlI~G~g~vG~~a~~~a~~~g-~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~---  263 (361)
                      ...++.+||-+|+|. |..+..+++..+ ..+|+++|.+++.++.+++    .|....+.....+  ..+.+..+..   
T Consensus        61 ~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d--~~~~~~~~~~~~~  137 (225)
T 3tr6_A           61 KLMQAKKVIDIGTFT-GYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSP--AKDTLAELIHAGQ  137 (225)
T ss_dssp             HHHTCSEEEEECCTT-SHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESC--HHHHHHHHHTTTC
T ss_pred             HhhCCCEEEEeCCcc-hHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCC--HHHHHHHhhhccC
Confidence            345788999999876 788888888764 3499999999998887765    3554211122222  3344444332   


Q ss_pred             -CCccEEEEccCC---hHHHHHHHHHhcCCCcEEEEEc
Q 018072          264 -GGVDRSVECTGN---IDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       264 -~g~Dvvid~~g~---~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                       +.||+|+-....   ...++.+.+.|+++ |.++.-.
T Consensus       138 ~~~fD~v~~~~~~~~~~~~l~~~~~~L~pg-G~lv~~~  174 (225)
T 3tr6_A          138 AWQYDLIYIDADKANTDLYYEESLKLLREG-GLIAVDN  174 (225)
T ss_dssp             TTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             CCCccEEEECCCHHHHHHHHHHHHHhcCCC-cEEEEeC
Confidence             479999965542   23577888999997 9988654

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=96.46  E-value=0.011  Score=52.64  Aligned_cols=102  Identities=13%  Similarity=0.153  Sum_probs=69.8

Q ss_pred             hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHHc-----CCCEE-EcCCCCCccHHHHHHH
Q 018072          188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKF-----GVTDF-VNTSEHDRPIQEVIAE  260 (361)
Q Consensus       188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~-g~~~Vi~~~~~~~~~~~~~~~-----G~~~v-v~~~~~~~~~~~~i~~  260 (361)
                      .....++++++||-+|+|. |..+..+++.. ...+|+++|.+++..+.+++.     |.+.+ +...+..    +   .
T Consensus       103 ~~~~~~~~~~~VLD~G~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~----~---~  174 (275)
T 1yb2_A          103 IMRCGLRPGMDILEVGVGS-GNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIA----D---F  174 (275)
T ss_dssp             ---CCCCTTCEEEEECCTT-SHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTT----T---C
T ss_pred             HHHcCCCCcCEEEEecCCC-CHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchh----c---c
Confidence            4556789999999999874 77888888874 234999999999988887653     54322 1111111    1   1


Q ss_pred             HcCCCccEEEEccCCh-HHHHHHHHHhcCCCcEEEEEcC
Q 018072          261 MTNGGVDRSVECTGNI-DNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       261 ~~~~g~Dvvid~~g~~-~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      +.++.||+|+.....+ ..+..+.+.|+++ |++++...
T Consensus       175 ~~~~~fD~Vi~~~~~~~~~l~~~~~~Lkpg-G~l~i~~~  212 (275)
T 1yb2_A          175 ISDQMYDAVIADIPDPWNHVQKIASMMKPG-SVATFYLP  212 (275)
T ss_dssp             CCSCCEEEEEECCSCGGGSHHHHHHTEEEE-EEEEEEES
T ss_pred             CcCCCccEEEEcCcCHHHHHHHHHHHcCCC-CEEEEEeC
Confidence            1223799999876654 4678899999997 99888753

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=96.46  E-value=0.014  Score=50.70  Aligned_cols=79  Identities=16%  Similarity=0.193  Sum_probs=50.1

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEE-cCChhhHHHHH----HcCCCE-E-EcCCCCC-ccHHHHHHHHcC--C
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKRFEEAK----KFGVTD-F-VNTSEHD-RPIQEVIAEMTN--G  264 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~-~~~~~~~~~~~----~~G~~~-v-v~~~~~~-~~~~~~i~~~~~--~  264 (361)
                      +.++||+|+ |++|...++.+...|+ +|+++ ++++++.+.+.    +.+... . +..+-.+ ..+.+.+.....  +
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGF-ALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLG   79 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcC
Confidence            357899988 9999999998888898 88887 88877665432    234432 2 3222222 123333332221  3


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      ++|++|+++|.
T Consensus        80 ~~d~li~~Ag~   90 (245)
T 2ph3_A           80 GLDTLVNNAGI   90 (245)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=96.45  E-value=0.0038  Score=53.84  Aligned_cols=88  Identities=14%  Similarity=0.201  Sum_probs=58.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  273 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~  273 (361)
                      .+.++||+|+ +++|...++.+...|+ +|++++++++             .|..+.+ .+.+.+..+  +++|++++++
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~-------------~D~~~~~-~v~~~~~~~--g~id~lv~nA   67 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHT-IVHVASRQTG-------------LDISDEK-SVYHYFETI--GAFDHLIVTA   67 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTE-EEEEESGGGT-------------CCTTCHH-HHHHHHHHH--CSEEEEEECC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEecCCcc-------------cCCCCHH-HHHHHHHHh--CCCCEEEECC
Confidence            3678999988 8999999998888898 8999987765             2222221 233333333  4789999988


Q ss_pred             CCh-----------H---------------HHHHHHHHhcCCCcEEEEEcCCC
Q 018072          274 GNI-----------D---------------NMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       274 g~~-----------~---------------~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      |..           +               ..+.+.+.+++. |+++.++...
T Consensus        68 g~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-g~iv~~sS~~  119 (223)
T 3uce_A           68 GSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQG-GSITLTSGML  119 (223)
T ss_dssp             CCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEE-EEEEEECCGG
T ss_pred             CCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCC-eEEEEecchh
Confidence            842           0               122333455566 8999997543

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=96.45  E-value=0.0072  Score=58.48  Aligned_cols=92  Identities=21%  Similarity=0.200  Sum_probs=70.4

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  273 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~  273 (361)
                      -.|.+|.|+|.|.+|...++.++.+|+ +|++++++..+...+...|... .     +  +.+.+     ...|+|+.++
T Consensus       275 L~GktVgIIG~G~IG~~vA~~l~~~G~-~V~v~d~~~~~~~~a~~~G~~~-~-----~--l~ell-----~~aDiVi~~~  340 (494)
T 3d64_A          275 IAGKIAVVAGYGDVGKGCAQSLRGLGA-TVWVTEIDPICALQAAMEGYRV-V-----T--MEYAA-----DKADIFVTAT  340 (494)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSCHHHHHHHHTTTCEE-C-----C--HHHHT-----TTCSEEEECS
T ss_pred             cCCCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCChHhHHHHHHcCCEe-C-----C--HHHHH-----hcCCEEEECC
Confidence            578999999999999999999999999 9999999988754555566532 1     1  32222     2589999998


Q ss_pred             CChHHH-HHHHHHhcCCCcEEEEEcCCC
Q 018072          274 GNIDNM-ISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       274 g~~~~~-~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      +....+ ...++.|+++ ..++.+|...
T Consensus       341 ~t~~lI~~~~l~~MK~g-AilINvgrg~  367 (494)
T 3d64_A          341 GNYHVINHDHMKAMRHN-AIVCNIGHFD  367 (494)
T ss_dssp             SSSCSBCHHHHHHCCTT-EEEEECSSSS
T ss_pred             CcccccCHHHHhhCCCC-cEEEEcCCCc
Confidence            765545 4677899997 8999998644

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=96.45  E-value=0.012  Score=52.60  Aligned_cols=77  Identities=21%  Similarity=0.304  Sum_probs=53.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCCE-EEcCCCCC-ccHHHHHHHHcC-CCccEE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD-FVNTSEHD-RPIQEVIAEMTN-GGVDRS  269 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~~~-vv~~~~~~-~~~~~~i~~~~~-~g~Dvv  269 (361)
                      .|.++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+. +++... .+..+-.+ ..+.+.+..... +++|++
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~l  107 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGL-GVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYA  107 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeE
Confidence            4678999988 9999999998888999 8999999998877654 455443 22222222 224444444422 278999


Q ss_pred             EEc
Q 018072          270 VEC  272 (361)
Q Consensus       270 id~  272 (361)
                      +.+
T Consensus       108 v~~  110 (281)
T 3ppi_A          108 VVA  110 (281)
T ss_dssp             EEC
T ss_pred             EEc
Confidence            998

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=96.44  E-value=0.0042  Score=54.50  Aligned_cols=75  Identities=24%  Similarity=0.279  Sum_probs=49.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcC--CCccEEEE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN--GGVDRSVE  271 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~--~g~Dvvid  271 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.  +  ...|..+.+ .+.+.+.....  +++|++|+
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~--~--~~~D~~~~~-~~~~~~~~~~~~~g~id~lv~   87 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKGLF--G--VEVDVTDSD-AVDRAFTAVEEHQGPVEVLVS   87 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTTSE--E--EECCTTCHH-HHHHHHHHHHHHHSSCSEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHhc--C--eeccCCCHH-HHHHHHHHHHHHcCCCCEEEE
Confidence            4678999988 9999999998888998 8999988876543321  1  223333321 23333333221  36899999


Q ss_pred             ccCC
Q 018072          272 CTGN  275 (361)
Q Consensus       272 ~~g~  275 (361)
                      ++|.
T Consensus        88 ~Ag~   91 (247)
T 1uzm_A           88 NAGL   91 (247)
T ss_dssp             ECSC
T ss_pred             CCCC
Confidence            9874

>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}

Probab=96.44  E-value=0.02  Score=52.36  Aligned_cols=134  Identities=15%  Similarity=0.122  Sum_probs=78.5

Q ss_pred             EEEEEcCCHHHHHH-HHHHHHcCCCeEEEEcCChhhHHH-HHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 018072          198 SVAVFGLGAVGLAA-AEGARIAGASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  275 (361)
Q Consensus       198 ~VlI~G~g~vG~~a-~~~a~~~g~~~Vi~~~~~~~~~~~-~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~  275 (361)
                      +|.|+|+|.+|... +..+...+.+.+.+.++++++.+. ++++|...++    .+  +.+.+   ....+|+|+.++..
T Consensus         2 ~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~~----~~--~~~~l---~~~~~D~V~i~tp~   72 (332)
T 2glx_A            2 RWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKSV----TS--VEELV---GDPDVDAVYVSTTN   72 (332)
T ss_dssp             EEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCCB----SC--HHHHH---TCTTCCEEEECSCG
T ss_pred             eEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCccc----CC--HHHHh---cCCCCCEEEEeCCh
Confidence            68899999999876 544333677334467888887755 4557764221    11  33332   22369999999998


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEcCCCCCceeecC-hhhhc--cccEEEEeeecCCCcCCcHHHHHHHHHcCCc
Q 018072          276 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKVI  344 (361)
Q Consensus       276 ~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~-~~~~~--~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l  344 (361)
                      ....+.+..+|..  |+-+++..+-....-... .....  +++.+.-.+...+  .+.+.++.+++++|++
T Consensus        73 ~~h~~~~~~al~~--Gk~v~~ekP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~--~p~~~~~~~~i~~g~i  140 (332)
T 2glx_A           73 ELHREQTLAAIRA--GKHVLCEKPLAMTLEDAREMVVAAREAGVVLGTNHHLRN--AAAHRAMRDAIAEGRI  140 (332)
T ss_dssp             GGHHHHHHHHHHT--TCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCCGGG--SHHHHHHHHHHHTTTT
T ss_pred             hHhHHHHHHHHHC--CCeEEEeCCCcCCHHHHHHHHHHHHHcCCEEEEeehhhc--CHHHHHHHHHHHcCCC
Confidence            7777788888875  666666432211110100 01111  4555433322222  3567888899988876

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=96.44  E-value=0.021  Score=51.95  Aligned_cols=87  Identities=18%  Similarity=0.232  Sum_probs=62.1

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 018072          197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  276 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~  276 (361)
                      .+|.|+|.|.+|...++.+...|. .|+++++++++.+.+.+.|+...     .+  ..+.+.     ..|+||.++..+
T Consensus        22 ~~I~iIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~~-----~~--~~~~~~-----~aDvvi~~vp~~   88 (310)
T 3doj_A           22 MEVGFLGLGIMGKAMSMNLLKNGF-KVTVWNRTLSKCDELVEHGASVC-----ES--PAEVIK-----KCKYTIAMLSDP   88 (310)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEEC-----SS--HHHHHH-----HCSEEEECCSSH
T ss_pred             CEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCeEc-----CC--HHHHHH-----hCCEEEEEcCCH
Confidence            589999999999999998888898 99999999999998888876321     11  333332     368888888776


Q ss_pred             HHHHHHH-------HHhcCCCcEEEEEc
Q 018072          277 DNMISAF-------ECVHDGWGVAVLVG  297 (361)
Q Consensus       277 ~~~~~~~-------~~l~~~~G~iv~~g  297 (361)
                      ..++..+       ..++++ ..++.++
T Consensus        89 ~~~~~v~~~~~~l~~~l~~g-~~vv~~s  115 (310)
T 3doj_A           89 CAALSVVFDKGGVLEQICEG-KGYIDMS  115 (310)
T ss_dssp             HHHHHHHHSTTCGGGGCCTT-CEEEECS
T ss_pred             HHHHHHHhCchhhhhccCCC-CEEEECC
Confidence            5555544       234443 4555554

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=96.44  E-value=0.012  Score=51.26  Aligned_cols=75  Identities=20%  Similarity=0.254  Sum_probs=47.7

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCC-ccHHHHHHH---HcC-CCcc
Q 018072          194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD-RPIQEVIAE---MTN-GGVD  267 (361)
Q Consensus       194 ~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~-~~~~~~i~~---~~~-~g~D  267 (361)
                      ..+.++||+|+ |++|...++.+...|+ +|+++++++++.+     +....+..+-.+ ..+.+.+..   ..+ +++|
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD   78 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEA-----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVD   78 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTS-----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCChhhcc-----CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCC
Confidence            45788999988 9999999998888898 8999998876532     111121111111 112222222   222 4799


Q ss_pred             EEEEccC
Q 018072          268 RSVECTG  274 (361)
Q Consensus       268 vvid~~g  274 (361)
                      ++|+++|
T Consensus        79 ~lv~~Ag   85 (241)
T 1dhr_A           79 AILCVAG   85 (241)
T ss_dssp             EEEECCC
T ss_pred             EEEEccc
Confidence            9999988

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.43  E-value=0.021  Score=51.38  Aligned_cols=86  Identities=19%  Similarity=0.253  Sum_probs=62.1

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChH
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  277 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~  277 (361)
                      +|.|+|+|.+|...+..+...|. +|+++++++++.+.+.+.|...   ..  +  ..+.+.     +.|+||.++..+.
T Consensus         7 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~~--~--~~~~~~-----~~D~vi~~v~~~~   73 (299)
T 1vpd_A            7 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAET---AS--T--AKAIAE-----QCDVIITMLPNSP   73 (299)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE---CS--S--HHHHHH-----HCSEEEECCSSHH
T ss_pred             eEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCee---cC--C--HHHHHh-----CCCEEEEECCCHH
Confidence            79999999999998888888888 8999999999988888776532   11  1  333332     3799999998766


Q ss_pred             HHHHHH-------HHhcCCCcEEEEEc
Q 018072          278 NMISAF-------ECVHDGWGVAVLVG  297 (361)
Q Consensus       278 ~~~~~~-------~~l~~~~G~iv~~g  297 (361)
                      .++..+       +.++++ ..++.++
T Consensus        74 ~~~~~~~~~~~l~~~l~~~-~~vv~~s   99 (299)
T 1vpd_A           74 HVKEVALGENGIIEGAKPG-TVLIDMS   99 (299)
T ss_dssp             HHHHHHHSTTCHHHHCCTT-CEEEECS
T ss_pred             HHHHHHhCcchHhhcCCCC-CEEEECC
Confidence            555554       456665 5665554

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=96.43  E-value=0.011  Score=50.29  Aligned_cols=98  Identities=18%  Similarity=0.176  Sum_probs=69.4

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEE--EcCCCCCccHHHHHHHHcCCCccE
Q 018072          191 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF--VNTSEHDRPIQEVIAEMTNGGVDR  268 (361)
Q Consensus       191 ~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~v--v~~~~~~~~~~~~i~~~~~~g~Dv  268 (361)
                      ..++++.+||-+|+|. |..+..+++. +. +|+++|.+++.++.+++.+...+  +..+-.+  +      ..++.+|+
T Consensus        42 ~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~--~------~~~~~~D~  110 (218)
T 3ou2_A           42 RAGNIRGDVLELASGT-GYWTRHLSGL-AD-RVTALDGSAEMIAEAGRHGLDNVEFRQQDLFD--W------TPDRQWDA  110 (218)
T ss_dssp             TTTTSCSEEEEESCTT-SHHHHHHHHH-SS-EEEEEESCHHHHHHHGGGCCTTEEEEECCTTS--C------CCSSCEEE
T ss_pred             hcCCCCCeEEEECCCC-CHHHHHHHhc-CC-eEEEEeCCHHHHHHHHhcCCCCeEEEeccccc--C------CCCCceeE
Confidence            3478889999999876 7777777777 76 99999999999999988664322  2111111  1      22348999


Q ss_pred             EEEccC-----C---hHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072          269 SVECTG-----N---IDNMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       269 vid~~g-----~---~~~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      |+....     .   ...+..+.+.|+++ |++++.....
T Consensus       111 v~~~~~l~~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~~~  149 (218)
T 3ou2_A          111 VFFAHWLAHVPDDRFEAFWESVRSAVAPG-GVVEFVDVTD  149 (218)
T ss_dssp             EEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEECC
T ss_pred             EEEechhhcCCHHHHHHHHHHHHHHcCCC-eEEEEEeCCC
Confidence            997532     1   34678888999997 9998876543

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=96.43  E-value=0.016  Score=50.09  Aligned_cols=75  Identities=11%  Similarity=0.169  Sum_probs=49.9

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCE-EEcCCCCCc-cHHHHHHHHcCCCccEEEEcc
Q 018072          198 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTD-FVNTSEHDR-PIQEVIAEMTNGGVDRSVECT  273 (361)
Q Consensus       198 ~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~-vv~~~~~~~-~~~~~i~~~~~~g~Dvvid~~  273 (361)
                      ++||+|+ |++|...+..+...|+ +|+.+++++++++.+.+ ++... .+..+-.+. .+.+.+.. ..+.+|++++++
T Consensus         3 ~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~-~~~~~d~lv~~A   80 (230)
T 3guy_A            3 LIVITGASSGLGAELAKLYDAEGK-ATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQ-LDSIPSTVVHSA   80 (230)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHS-CSSCCSEEEECC
T ss_pred             EEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHH-HhhcCCEEEEeC
Confidence            6899988 8999999998889998 89999999988877654 43322 222222221 12222222 223459999998


Q ss_pred             C
Q 018072          274 G  274 (361)
Q Consensus       274 g  274 (361)
                      |
T Consensus        81 g   81 (230)
T 3guy_A           81 G   81 (230)
T ss_dssp             C
T ss_pred             C
Confidence            7

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=96.43  E-value=0.013  Score=50.97  Aligned_cols=79  Identities=23%  Similarity=0.287  Sum_probs=49.8

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEE-EcCChhhHHHH----HHcCCCE-EEcCCCCC-ccHHHHHHHHc--CCC
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIG-VDRSSKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMT--NGG  265 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~-~~~~~~~~~~~----~~~G~~~-vv~~~~~~-~~~~~~i~~~~--~~g  265 (361)
                      |.++||+|+ |++|...++.+...|+ +|++ .++++++.+.+    ++.+... .+..+-.+ .++.+.+....  -++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGC-KVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGT   79 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            467899987 9999999999888998 7877 57887765543    2234432 22222222 12333333322  137


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++|+++|.
T Consensus        80 id~li~~Ag~   89 (244)
T 1edo_A           80 IDVVVNNAGI   89 (244)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=96.43  E-value=0.01  Score=52.07  Aligned_cols=81  Identities=16%  Similarity=0.223  Sum_probs=50.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCh--hhHHHHHHc--CCCE-EE--cCCCCCccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS--KRFEEAKKF--GVTD-FV--NTSEHDRPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~--~~~~~~~~~--G~~~-vv--~~~~~~~~~~~~i~~~~~--~  264 (361)
                      .+.++||+|+ |++|...++.+...|+.+|+++++++  +..+.+.+.  +... .+  |..+...++.+.+.....  +
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   83 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence            3678999987 99999999988889984488888876  344444433  2221 22  222220223333333322  3


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      ++|++|+++|.
T Consensus        84 ~id~lv~~Ag~   94 (254)
T 1sby_A           84 TVDILINGAGI   94 (254)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            79999999873

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=96.41  E-value=0.017  Score=52.71  Aligned_cols=89  Identities=18%  Similarity=0.253  Sum_probs=64.0

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  273 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~  273 (361)
                      -.|.+|.|+|.|.+|...++.++..|. +|++++++.++. .+.++|+..    .  +  +.+.+.     ..|+|+.++
T Consensus       140 l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~g~~~----~--~--l~ell~-----~aDvVvl~~  204 (313)
T 2ekl_A          140 LAGKTIGIVGFGRIGTKVGIIANAMGM-KVLAYDILDIRE-KAEKINAKA----V--S--LEELLK-----NSDVISLHV  204 (313)
T ss_dssp             CTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSCCHH-HHHHTTCEE----C--C--HHHHHH-----HCSEEEECC
T ss_pred             CCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCcchh-HHHhcCcee----c--C--HHHHHh-----hCCEEEEec
Confidence            467899999999999999999999998 999999988765 456677642    1  1  333332     368888887


Q ss_pred             CChH----HH-HHHHHHhcCCCcEEEEEcC
Q 018072          274 GNID----NM-ISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       274 g~~~----~~-~~~~~~l~~~~G~iv~~g~  298 (361)
                      ....    .+ ...++.|+++ +.++.++.
T Consensus       205 P~~~~t~~li~~~~l~~mk~g-a~lIn~ar  233 (313)
T 2ekl_A          205 TVSKDAKPIIDYPQFELMKDN-VIIVNTSR  233 (313)
T ss_dssp             CCCTTSCCSBCHHHHHHSCTT-EEEEESSC
T ss_pred             cCChHHHHhhCHHHHhcCCCC-CEEEECCC
Confidence            6422    12 4566778876 77777764

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=96.40  E-value=0.012  Score=52.38  Aligned_cols=80  Identities=28%  Similarity=0.276  Sum_probs=50.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH---cCCCE-EEcCCCCCc-cHHHHHHHHc-CCCcc
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK---FGVTD-FVNTSEHDR-PIQEVIAEMT-NGGVD  267 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~---~G~~~-vv~~~~~~~-~~~~~i~~~~-~~g~D  267 (361)
                      .|.++||+|+ |++|...++.+...|+ +|++++++++..+.+++   .+... .+..+-.+. ++.+...... .+++|
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD  108 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGA-HVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVD  108 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCc
Confidence            4789999988 8999999998889999 89988876554444433   34332 222222221 1222211111 14799


Q ss_pred             EEEEccCC
Q 018072          268 RSVECTGN  275 (361)
Q Consensus       268 vvid~~g~  275 (361)
                      ++|+++|.
T Consensus       109 ~lv~nAg~  116 (273)
T 3uf0_A          109 VLVNNAGI  116 (273)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999874

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=96.40  E-value=0.0064  Score=54.50  Aligned_cols=79  Identities=20%  Similarity=0.343  Sum_probs=51.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE--EEcCCCCC-ccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD--FVNTSEHD-RPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~--vv~~~~~~-~~~~~~i~~~~~--~  264 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++++.+.    +.|...  .+..+-.+ ..+.+.+.....  +
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g  105 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG  105 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            3678999998 9999999998888998 8999999988776543    234422  22222222 123333332211  3


Q ss_pred             CccEEEEc-cC
Q 018072          265 GVDRSVEC-TG  274 (361)
Q Consensus       265 g~Dvvid~-~g  274 (361)
                      ++|++|++ .|
T Consensus       106 ~iD~li~naag  116 (286)
T 1xu9_A          106 GLDMLILNHIT  116 (286)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            79999998 44

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=96.39  E-value=0.0082  Score=53.03  Aligned_cols=79  Identities=28%  Similarity=0.297  Sum_probs=51.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEE-cCChhhHHHHH----HcCCCEE-EcCCCCC-ccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKRFEEAK----KFGVTDF-VNTSEHD-RPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~-~~~~~~~~~~~----~~G~~~v-v~~~~~~-~~~~~~i~~~~~--~  264 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+.+ ++++++.+.+.    +.|.... +..+-.+ .++.+.+.....  +
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~-~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGY-NIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFG   81 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5788999987 9999999999989999 77775 88877665543    2354332 2222222 123333333222  3


Q ss_pred             CccEEEEccC
Q 018072          265 GVDRSVECTG  274 (361)
Q Consensus       265 g~Dvvid~~g  274 (361)
                      ++|++|+++|
T Consensus        82 ~id~lv~nAg   91 (258)
T 3oid_A           82 RLDVFVNNAA   91 (258)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7899999987

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=96.39  E-value=0.0056  Score=54.11  Aligned_cols=80  Identities=11%  Similarity=0.205  Sum_probs=51.7

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcC---CCeEEEEcCChhhHHHHHHc---CCCE-EE--cCCCCCccHHHHHHHHc-
Q 018072          194 ERGSSVAVFGL-GAVGLAAAEGARIAG---ASRIIGVDRSSKRFEEAKKF---GVTD-FV--NTSEHDRPIQEVIAEMT-  262 (361)
Q Consensus       194 ~~g~~VlI~G~-g~vG~~a~~~a~~~g---~~~Vi~~~~~~~~~~~~~~~---G~~~-vv--~~~~~~~~~~~~i~~~~-  262 (361)
                      -.+.++||+|+ |++|...++.+...|   . +|+++++++++.+.++++   +... .+  |..+. ..+.+.+..+. 
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~-~~v~~~~~~~~~   96 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNF-DAYDKLVADIEG   96 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCG-GGHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCc-EEEEEecChhhhHHHHHhhccCCceEEEEecCCCh-HHHHHHHHHHHH
Confidence            34678999988 999999999888888   6 899999987654444332   3322 22  22222 23444443332 


Q ss_pred             --CC-CccEEEEccCC
Q 018072          263 --NG-GVDRSVECTGN  275 (361)
Q Consensus       263 --~~-g~Dvvid~~g~  275 (361)
                        +. ++|++|+++|.
T Consensus        97 ~~g~~~id~li~~Ag~  112 (267)
T 1sny_A           97 VTKDQGLNVLFNNAGI  112 (267)
T ss_dssp             HHGGGCCSEEEECCCC
T ss_pred             hcCCCCccEEEECCCc
Confidence              22 59999999873

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.38  E-value=0.029  Score=51.22  Aligned_cols=89  Identities=17%  Similarity=0.192  Sum_probs=63.3

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  275 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~  275 (361)
                      ..+|.|+|.|.+|...++.+...|. +|+++++++++.+.+.+.|+...-     +  ..+.+     ...|+||.++..
T Consensus        31 ~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~~~-----~--~~e~~-----~~aDvVi~~vp~   97 (320)
T 4dll_A           31 ARKITFLGTGSMGLPMARRLCEAGY-ALQVWNRTPARAASLAALGATIHE-----Q--ARAAA-----RDADIVVSMLEN   97 (320)
T ss_dssp             CSEEEEECCTTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTCEEES-----S--HHHHH-----TTCSEEEECCSS
T ss_pred             CCEEEEECccHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHCCCEeeC-----C--HHHHH-----hcCCEEEEECCC
Confidence            4589999999999999998888898 899999999999988877753211     1  22222     247899999887


Q ss_pred             hHHHHHHH------HHhcCCCcEEEEEcC
Q 018072          276 IDNMISAF------ECVHDGWGVAVLVGV  298 (361)
Q Consensus       276 ~~~~~~~~------~~l~~~~G~iv~~g~  298 (361)
                      +..+...+      +.+.++ ..++.++.
T Consensus        98 ~~~~~~v~~~~~~~~~l~~~-~~vi~~st  125 (320)
T 4dll_A           98 GAVVQDVLFAQGVAAAMKPG-SLFLDMAS  125 (320)
T ss_dssp             HHHHHHHHTTTCHHHHCCTT-CEEEECSC
T ss_pred             HHHHHHHHcchhHHhhCCCC-CEEEecCC
Confidence            55555444      245554 55555553

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=96.37  E-value=0.02  Score=51.92  Aligned_cols=101  Identities=17%  Similarity=0.150  Sum_probs=70.3

Q ss_pred             hhhcC-CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCC---EEEcCCCCCccHHHHHH
Q 018072          188 LNVAK-PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT---DFVNTSEHDRPIQEVIA  259 (361)
Q Consensus       188 ~~~~~-~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~---~vv~~~~~~~~~~~~i~  259 (361)
                      .+... ++++++||-+|+|. |..+..+++..+. +|+++|.+++.++.+++    .|..   .++.-+-.+  +     
T Consensus       109 ~~~l~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~--~-----  179 (312)
T 3vc1_A          109 MDHLGQAGPDDTLVDAGCGR-GGSMVMAHRRFGS-RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLD--T-----  179 (312)
T ss_dssp             HTTSCCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS--C-----
T ss_pred             HHHhccCCCCCEEEEecCCC-CHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhc--C-----
Confidence            34444 88999999999876 7788888887777 89999999998887765    4433   122211111  0     


Q ss_pred             HHcCCCccEEEEc-----cCChHHHHHHHHHhcCCCcEEEEEcC
Q 018072          260 EMTNGGVDRSVEC-----TGNIDNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       260 ~~~~~g~Dvvid~-----~g~~~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      .+.++.||+|+..     .+....+..+.+.|+++ |++++...
T Consensus       180 ~~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  222 (312)
T 3vc1_A          180 PFDKGAVTASWNNESTMYVDLHDLFSEHSRFLKVG-GRYVTITG  222 (312)
T ss_dssp             CCCTTCEEEEEEESCGGGSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             CCCCCCEeEEEECCchhhCCHHHHHHHHHHHcCCC-cEEEEEEc
Confidence            0123479999873     23356788999999997 99987753

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=96.37  E-value=0.014  Score=49.98  Aligned_cols=97  Identities=15%  Similarity=0.191  Sum_probs=61.1

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 018072          197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  275 (361)
Q Consensus       197 ~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~  275 (361)
                      .+|||+|+ |.+|...++.+...|. +|+++++++++.+.+. -+. .++..+-.+   .+.+..... ++|+||+++|.
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-~~~-~~~~~Dl~d---~~~~~~~~~-~~d~vi~~a~~   77 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGF-EVTAVVRHPEKIKIEN-EHL-KVKKADVSS---LDEVCEVCK-GADAVISAFNP   77 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTC-EEEEECSCGGGCCCCC-TTE-EEECCCTTC---HHHHHHHHT-TCSEEEECCCC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC-EEEEEEcCcccchhcc-Cce-EEEEecCCC---HHHHHHHhc-CCCEEEEeCcC
Confidence            58999998 9999999999998998 9999999987653321 111 222222222   223333333 69999999986


Q ss_pred             hH-----------HHHHHHHHhcCCC-cEEEEEcCCC
Q 018072          276 ID-----------NMISAFECVHDGW-GVAVLVGVPS  300 (361)
Q Consensus       276 ~~-----------~~~~~~~~l~~~~-G~iv~~g~~~  300 (361)
                      ..           .....++.+...+ .+++.++...
T Consensus        78 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~  114 (227)
T 3dhn_A           78 GWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAG  114 (227)
T ss_dssp             ------CCSHHHHHHHHHHHHHHHTTCSEEEEECCST
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChh
Confidence            31           2234445555431 4888887644

>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A

Probab=96.37  E-value=0.0048  Score=56.92  Aligned_cols=100  Identities=22%  Similarity=0.181  Sum_probs=66.8

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc------CC-CEEEcCCCCCccHHHHHHHHcCCC
Q 018072          193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF------GV-TDFVNTSEHDRPIQEVIAEMTNGG  265 (361)
Q Consensus       193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~------G~-~~vv~~~~~~~~~~~~i~~~~~~g  265 (361)
                      ...+.+||.+|+|. |..+..+++..+..+|++++.+++.++.+++.      |. +.-+.....+  ..+.+....++.
T Consensus       118 ~~~~~~VLdIG~G~-G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D--~~~~l~~~~~~~  194 (334)
T 1xj5_A          118 IPNPKKVLVIGGGD-GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGD--GVAFLKNAAEGS  194 (334)
T ss_dssp             SSCCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESC--HHHHHHTSCTTC
T ss_pred             CCCCCEEEEECCCc-cHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECC--HHHHHHhccCCC
Confidence            45668999999864 66677777765545999999999988888763      11 1001111222  444443333347


Q ss_pred             ccEEEEccC----------ChHHHHHHHHHhcCCCcEEEEE
Q 018072          266 VDRSVECTG----------NIDNMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       266 ~Dvvid~~g----------~~~~~~~~~~~l~~~~G~iv~~  296 (361)
                      ||+|+....          ....+..+.+.|+++ |.+++-
T Consensus       195 fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~  234 (334)
T 1xj5_A          195 YDAVIVDSSDPIGPAKELFEKPFFQSVARALRPG-GVVCTQ  234 (334)
T ss_dssp             EEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEE-EEEEEE
T ss_pred             ccEEEECCCCccCcchhhhHHHHHHHHHHhcCCC-cEEEEe
Confidence            999996432          245788999999997 999886

>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}

Probab=96.36  E-value=0.01  Score=51.74  Aligned_cols=102  Identities=18%  Similarity=0.165  Sum_probs=68.4

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHc----
Q 018072          192 KPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT----  262 (361)
Q Consensus       192 ~~~~g~~VlI~G~g~vG~~a~~~a~~~g-~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~----  262 (361)
                      ...++.+||-+|+|. |..++.+|+.+. ..+|++++.+++..+.+++    .|....+.....+  ..+.+..+.    
T Consensus        67 ~~~~~~~VLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd--a~~~l~~l~~~~~  143 (237)
T 3c3y_A           67 KLVNAKKTIEVGVFT-GYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESD--AMLALDNLLQGQE  143 (237)
T ss_dssp             HHTTCCEEEEECCTT-SHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESC--HHHHHHHHHHSTT
T ss_pred             HhhCCCEEEEeCCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC--HHHHHHHHHhccC
Confidence            345678999999875 777788888864 3499999999998887754    4653212222222  334444332    


Q ss_pred             -CCCccEEEEccCC---hHHHHHHHHHhcCCCcEEEEEc
Q 018072          263 -NGGVDRSVECTGN---IDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       263 -~~g~Dvvid~~g~---~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                       .+.||+||-....   ...++.+.+.|+++ |.++.-.
T Consensus       144 ~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pG-G~lv~d~  181 (237)
T 3c3y_A          144 SEGSYDFGFVDADKPNYIKYHERLMKLVKVG-GIVAYDN  181 (237)
T ss_dssp             CTTCEEEEEECSCGGGHHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             CCCCcCEEEECCchHHHHHHHHHHHHhcCCC-eEEEEec
Confidence             3479999965543   24577888999997 9887654

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=96.35  E-value=0.0083  Score=52.68  Aligned_cols=77  Identities=22%  Similarity=0.318  Sum_probs=51.8

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCCE-EEcCCCCC-ccHHHHHHHHcC--CCccEEEE
Q 018072          198 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD-FVNTSEHD-RPIQEVIAEMTN--GGVDRSVE  271 (361)
Q Consensus       198 ~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~g~Dvvid  271 (361)
                      ++||+|+ |++|...++.+...|+ +|+.+++++++++.+. +++... .+..+-.+ .++.+.+.....  +++|++|+
T Consensus         2 ~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn   80 (248)
T 3asu_A            2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN   80 (248)
T ss_dssp             EEEETTTTSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred             EEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            6888887 8999999998888998 8999999988776654 344322 22222222 223334443333  27999999


Q ss_pred             ccCC
Q 018072          272 CTGN  275 (361)
Q Consensus       272 ~~g~  275 (361)
                      ++|.
T Consensus        81 nAg~   84 (248)
T 3asu_A           81 NAGL   84 (248)
T ss_dssp             CCCC
T ss_pred             CCCc
Confidence            9873

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=96.35  E-value=0.024  Score=51.73  Aligned_cols=75  Identities=16%  Similarity=0.185  Sum_probs=50.9

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC---hhhHHHHH-H----cCCC-EEEcCCCCCccHHHHHHHHcCCC
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS---SKRFEEAK-K----FGVT-DFVNTSEHDRPIQEVIAEMTNGG  265 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~---~~~~~~~~-~----~G~~-~vv~~~~~~~~~~~~i~~~~~~g  265 (361)
                      .|.++||+|+|++|.+++..+...|+++|+++.|+   .+|.+.+. +    .+.. .++.+.+    .. .+.+.. ..
T Consensus       153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~----~~-~l~~~l-~~  226 (315)
T 3tnl_A          153 IGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIED----HE-QLRKEI-AE  226 (315)
T ss_dssp             TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTC----HH-HHHHHH-HT
T ss_pred             cCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccch----HH-HHHhhh-cC
Confidence            57899999999999999999999999889999999   66655442 2    2322 2333332    11 122111 15


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|+||++++-
T Consensus       227 aDiIINaTp~  236 (315)
T 3tnl_A          227 SVIFTNATGV  236 (315)
T ss_dssp             CSEEEECSST
T ss_pred             CCEEEECccC
Confidence            8999999863

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=96.34  E-value=0.0097  Score=57.34  Aligned_cols=93  Identities=24%  Similarity=0.302  Sum_probs=70.7

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEc
Q 018072          193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  272 (361)
Q Consensus       193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~  272 (361)
                      .-.|.+|.|+|.|.+|...++.++.+|+ +|++++++..+...+...|+.. .     +  +.+.+     ...|+|+-+
T Consensus       254 ~l~GktVgIIG~G~IG~~vA~~l~~~G~-~Viv~d~~~~~~~~a~~~g~~~-~-----~--l~ell-----~~aDiVi~~  319 (479)
T 1v8b_A          254 LISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGFNV-V-----T--LDEIV-----DKGDFFITC  319 (479)
T ss_dssp             CCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTCEE-C-----C--HHHHT-----TTCSEEEEC
T ss_pred             ccCCCEEEEEeeCHHHHHHHHHHHhCcC-EEEEEeCChhhHHHHHHcCCEe-c-----C--HHHHH-----hcCCEEEEC
Confidence            3578999999999999999999999999 9999999988765555666631 1     1  33222     258999999


Q ss_pred             cCChHHH-HHHHHHhcCCCcEEEEEcCCC
Q 018072          273 TGNIDNM-ISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       273 ~g~~~~~-~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      ++....+ ...++.|+++ ..++.+|...
T Consensus       320 ~~t~~lI~~~~l~~MK~g-ailiNvgrg~  347 (479)
T 1v8b_A          320 TGNVDVIKLEHLLKMKNN-AVVGNIGHFD  347 (479)
T ss_dssp             CSSSSSBCHHHHTTCCTT-CEEEECSSTT
T ss_pred             CChhhhcCHHHHhhcCCC-cEEEEeCCCC
Confidence            8765554 3667788987 8999998654

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=96.34  E-value=0.012  Score=50.58  Aligned_cols=100  Identities=16%  Similarity=0.131  Sum_probs=68.7

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHH----cC-----CCEEEcCCCCCccHHHHHHHH
Q 018072          192 KPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FG-----VTDFVNTSEHDRPIQEVIAEM  261 (361)
Q Consensus       192 ~~~~g~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~----~G-----~~~vv~~~~~~~~~~~~i~~~  261 (361)
                      .++++++||-+|+|. |..+..+++..|. .+|+++|.+++.++.+++    .|     .+.+. ....+  ....  ..
T Consensus        74 ~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~-~~~~d--~~~~--~~  147 (226)
T 1i1n_A           74 QLHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQ-LVVGD--GRMG--YA  147 (226)
T ss_dssp             TSCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEE-EEESC--GGGC--CG
T ss_pred             hCCCCCEEEEEcCCc-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEE-EEECC--cccC--cc
Confidence            378999999999986 8888888888763 389999999998888754    22     11111 11111  1000  01


Q ss_pred             cCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcC
Q 018072          262 TNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       262 ~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      ..+.||+|+........+..+.+.|+++ |++++.-.
T Consensus       148 ~~~~fD~i~~~~~~~~~~~~~~~~Lkpg-G~lv~~~~  183 (226)
T 1i1n_A          148 EEAPYDAIHVGAAAPVVPQALIDQLKPG-GRLILPVG  183 (226)
T ss_dssp             GGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEEES
T ss_pred             cCCCcCEEEECCchHHHHHHHHHhcCCC-cEEEEEEe
Confidence            1237999998877666778999999997 99887543

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=96.34  E-value=0.011  Score=52.64  Aligned_cols=80  Identities=28%  Similarity=0.302  Sum_probs=53.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCEEEcC-CCCC-ccHHHHHHHHc--CCC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDFVNT-SEHD-RPIQEVIAEMT--NGG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~vv~~-~~~~-~~~~~~i~~~~--~~g  265 (361)
                      .|.++||+|+ |++|...++.+...|+ +|+.+++++++.+.+.    +.|....+.. +-.+ .++.+.+....  .++
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  103 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGA-RILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGID  103 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence            4688999987 9999999998889999 8999999988765543    3454433222 2122 12333333322  237


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++++++|.
T Consensus       104 iD~lv~nAg~  113 (271)
T 4ibo_A          104 VDILVNNAGI  113 (271)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999883

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=96.34  E-value=0.011  Score=52.15  Aligned_cols=80  Identities=21%  Similarity=0.170  Sum_probs=52.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-EEcCCCCC-ccHHHHHHH---HcCC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHD-RPIQEVIAE---MTNG  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-vv~~~~~~-~~~~~~i~~---~~~~  264 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.    +.+... .+..+-.+ ..+.+.+..   ...+
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   91 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG   91 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            4678999988 9999999998888998 8999999987665432    234432 22222222 112222222   2224


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      ++|++|+++|.
T Consensus        92 ~id~li~~Ag~  102 (266)
T 1xq1_A           92 KLDILINNLGA  102 (266)
T ss_dssp             CCSEEEEECCC
T ss_pred             CCcEEEECCCC
Confidence            79999999874

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=96.32  E-value=0.026  Score=51.50  Aligned_cols=92  Identities=16%  Similarity=0.144  Sum_probs=63.4

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCC-eEEEEcCChhhHHHHHHcCCC-EEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072          197 SSVAVFGLGAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~g~~-~Vi~~~~~~~~~~~~~~~G~~-~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      .+|.|+|.|.+|...++.++..|.. +|+++++++++.+.+.+.|.. ....  +..    +.   .. .+.|+||.++.
T Consensus        34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~--~~~----~~---~~-~~aDvVilavp  103 (314)
T 3ggo_A           34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTT--SIA----KV---ED-FSPDFVMLSSP  103 (314)
T ss_dssp             SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEES--CTT----GG---GG-GCCSEEEECSC
T ss_pred             CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcC--CHH----HH---hh-ccCCEEEEeCC
Confidence            5899999999999999988888863 799999999999999988873 2221  111    00   00 25799999987


Q ss_pred             ChHH---HHHHHHHhcCCCcEEEEEcCC
Q 018072          275 NIDN---MISAFECVHDGWGVAVLVGVP  299 (361)
Q Consensus       275 ~~~~---~~~~~~~l~~~~G~iv~~g~~  299 (361)
                      ....   +......++++ ..++.++..
T Consensus       104 ~~~~~~vl~~l~~~l~~~-~iv~d~~Sv  130 (314)
T 3ggo_A          104 VRTFREIAKKLSYILSED-ATVTDQGSV  130 (314)
T ss_dssp             GGGHHHHHHHHHHHSCTT-CEEEECCSC
T ss_pred             HHHHHHHHHHHhhccCCC-cEEEECCCC
Confidence            6432   23344455665 666666543

>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*

Probab=96.32  E-value=0.005  Score=52.91  Aligned_cols=103  Identities=16%  Similarity=0.109  Sum_probs=68.4

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcC---
Q 018072          192 KPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN---  263 (361)
Q Consensus       192 ~~~~g~~VlI~G~g~vG~~a~~~a~~~g-~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~---  263 (361)
                      ...++.+||-+|+|. |..+..+|+..+ ..+|+++|.+++.++.+++    .|....+.....+  ..+.+..+..   
T Consensus        55 ~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d--~~~~~~~~~~~~~  131 (223)
T 3duw_A           55 QIQGARNILEIGTLG-GYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGL--ALDSLQQIENEKY  131 (223)
T ss_dssp             HHHTCSEEEEECCTT-SHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESC--HHHHHHHHHHTTC
T ss_pred             HhhCCCEEEEecCCc-cHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC--HHHHHHHHHhcCC
Confidence            446788999999874 788888888773 2399999999998887754    4553211122222  3333333321   


Q ss_pred             CCccEEEEccCC---hHHHHHHHHHhcCCCcEEEEEcC
Q 018072          264 GGVDRSVECTGN---IDNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       264 ~g~Dvvid~~g~---~~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      +.||+|+-....   +..++.+.+.|+++ |.++.-..
T Consensus       132 ~~fD~v~~d~~~~~~~~~l~~~~~~L~pg-G~lv~~~~  168 (223)
T 3duw_A          132 EPFDFIFIDADKQNNPAYFEWALKLSRPG-TVIIGDNV  168 (223)
T ss_dssp             CCCSEEEECSCGGGHHHHHHHHHHTCCTT-CEEEEESC
T ss_pred             CCcCEEEEcCCcHHHHHHHHHHHHhcCCC-cEEEEeCC
Confidence            369999965432   34677888999997 98876543

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=96.32  E-value=0.064  Score=49.12  Aligned_cols=76  Identities=20%  Similarity=0.271  Sum_probs=50.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChh----hHHHHHHc------CCCEEEcCCCCCccHHHHHHHHcC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK----RFEEAKKF------GVTDFVNTSEHDRPIQEVIAEMTN  263 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~----~~~~~~~~------G~~~vv~~~~~~~~~~~~i~~~~~  263 (361)
                      .+.+|||+|+ |.+|...++.+...|. +|++++++..    ..+.+...      .--.++..+-.+   .+.+.....
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d---~~~~~~~~~   99 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKLNQ-VVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRD---LTTCEQVMK   99 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTC---HHHHHHHTT
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCC---HHHHHHHhc
Confidence            3579999998 9999999999988998 8999988543    33333332      222233222222   223444443


Q ss_pred             CCccEEEEccCC
Q 018072          264 GGVDRSVECTGN  275 (361)
Q Consensus       264 ~g~Dvvid~~g~  275 (361)
                       ++|+||++++.
T Consensus       100 -~~d~Vih~A~~  110 (351)
T 3ruf_A          100 -GVDHVLHQAAL  110 (351)
T ss_dssp             -TCSEEEECCCC
T ss_pred             -CCCEEEECCcc
Confidence             79999999984

>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}

Probab=96.32  E-value=0.0097  Score=51.24  Aligned_cols=98  Identities=16%  Similarity=0.247  Sum_probs=66.2

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCC-EEEcCCCCCccHHHHHHHHcCCC
Q 018072          191 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT-DFVNTSEHDRPIQEVIAEMTNGG  265 (361)
Q Consensus       191 ~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~-~vv~~~~~~~~~~~~i~~~~~~g  265 (361)
                      ..++++++||=+|+|..|..+..+++..+. +|+++|.+++.++.+++    .+.. .++..+...  +    ..+.++.
T Consensus        51 ~~~~~~~~vLDlG~G~~G~~~~~la~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~--~----~~~~~~~  123 (230)
T 3evz_A           51 TFLRGGEVALEIGTGHTAMMALMAEKFFNC-KVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGI--I----KGVVEGT  123 (230)
T ss_dssp             TTCCSSCEEEEECCTTTCHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCS--S----TTTCCSC
T ss_pred             hhcCCCCEEEEcCCCHHHHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchh--h----hhcccCc
Confidence            446789999999998568888888887665 99999999998887754    3432 222222111  0    1122347


Q ss_pred             ccEEEEccCC-------------------------hHHHHHHHHHhcCCCcEEEEE
Q 018072          266 VDRSVECTGN-------------------------IDNMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       266 ~Dvvid~~g~-------------------------~~~~~~~~~~l~~~~G~iv~~  296 (361)
                      ||+|+-...-                         ...+..+.+.|+++ |+++++
T Consensus       124 fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~  178 (230)
T 3evz_A          124 FDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPG-GKVALY  178 (230)
T ss_dssp             EEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEE-EEEEEE
T ss_pred             eeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCC-eEEEEE
Confidence            9999965221                         34567777888997 988775

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=96.32  E-value=0.0083  Score=53.60  Aligned_cols=79  Identities=27%  Similarity=0.231  Sum_probs=52.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-EE--cCCCCCccHHHHHHHHcC-CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FV--NTSEHDRPIQEVIAEMTN-GG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-vv--~~~~~~~~~~~~i~~~~~-~g  265 (361)
                      .|.++||+|+ +++|.+.++.+...|+ +|+++++++++.+.+.    +.+... .+  |..+.+ .+.+.+..... ++
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~-~~~~~~~~~~~~g~  109 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAG-AGTDLIERAEAIAP  109 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTT-HHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHH-HHHHHHHHHHHhCC
Confidence            4688999987 8999999998889999 8999999887655432    234432 22  232222 23333332211 47


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++++++|.
T Consensus       110 iD~lvnnAg~  119 (275)
T 4imr_A          110 VDILVINASA  119 (275)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999983

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=96.31  E-value=0.012  Score=53.14  Aligned_cols=79  Identities=15%  Similarity=0.225  Sum_probs=51.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH---------cCCCE-EEcCCCCC-ccHHHHHHHHc
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK---------FGVTD-FVNTSEHD-RPIQEVIAEMT  262 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~---------~G~~~-vv~~~~~~-~~~~~~i~~~~  262 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.+         .+... .+..+-.+ ..+.+.+....
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   95 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL   95 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHH
Confidence            4679999988 9999999998888998 89999999877654422         23322 22222222 12333333322


Q ss_pred             C--CCccEEEEccC
Q 018072          263 N--GGVDRSVECTG  274 (361)
Q Consensus       263 ~--~g~Dvvid~~g  274 (361)
                      .  +++|++|+++|
T Consensus        96 ~~~g~id~li~~Ag  109 (303)
T 1yxm_A           96 DTFGKINFLVNNGG  109 (303)
T ss_dssp             HHHSCCCEEEECCC
T ss_pred             HHcCCCCEEEECCC
Confidence            1  36999999998

>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}

Probab=96.31  E-value=0.045  Score=50.43  Aligned_cols=134  Identities=14%  Similarity=0.139  Sum_probs=85.2

Q ss_pred             CEEEEEcCCHHHHH-HHHHHHHc-CCCeEE-EEcCChhhHHH-HHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEc
Q 018072          197 SSVAVFGLGAVGLA-AAEGARIA-GASRII-GVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  272 (361)
Q Consensus       197 ~~VlI~G~g~vG~~-a~~~a~~~-g~~~Vi-~~~~~~~~~~~-~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~  272 (361)
                      -++.|+|+|.+|.. .+...+.. ++ +++ +.++++++.+. ++++|...++.  +    +.+.+.   +..+|+|+.+
T Consensus        24 irigiIG~G~ig~~~~~~~~~~~~~~-~lvav~d~~~~~a~~~a~~~g~~~~y~--d----~~ell~---~~~iDaV~I~   93 (350)
T 4had_A           24 LRFGIISTAKIGRDNVVPAIQDAENC-VVTAIASRDLTRAREMADRFSVPHAFG--S----YEEMLA---SDVIDAVYIP   93 (350)
T ss_dssp             EEEEEESCCHHHHHTHHHHHHHCSSE-EEEEEECSSHHHHHHHHHHHTCSEEES--S----HHHHHH---CSSCSEEEEC
T ss_pred             cEEEEEcChHHHHHHHHHHHHhCCCe-EEEEEECCCHHHHHHHHHHcCCCeeeC--C----HHHHhc---CCCCCEEEEe
Confidence            47999999999975 35555554 56 555 56788877555 56789876653  1    444442   2479999999


Q ss_pred             cCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecCh-hhhc--cccEEEEeeecCCCcCCcHHHHHHHHHcCCc
Q 018072          273 TGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKVI  344 (361)
Q Consensus       273 ~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~~--~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l  344 (361)
                      +....-.+.+.++|..  |+=|++-.+-....-.... ....  +++.+.-.+..++  .+.+.++-+++++|+|
T Consensus        94 tP~~~H~~~~~~al~a--GkhVl~EKPla~~~~ea~~l~~~a~~~~~~l~v~~~~R~--~p~~~~~k~~i~~G~i  164 (350)
T 4had_A           94 LPTSQHIEWSIKAADA--GKHVVCEKPLALKAGDIDAVIAARDRNKVVVTEAYMITY--SPVWQKVRSLIDEGAI  164 (350)
T ss_dssp             SCGGGHHHHHHHHHHT--TCEEEECSCCCSSGGGGHHHHHHHHHHTCCEEECCGGGG--SHHHHHHHHHHHTTTT
T ss_pred             CCCchhHHHHHHHHhc--CCEEEEeCCcccchhhHHHHHHHHHHcCCceeEeeeeec--CHHHHHhhHhhhcCCC
Confidence            9987788889988885  6778886543221111111 1111  3554433333333  4578888899999876

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=96.31  E-value=0.0084  Score=55.56  Aligned_cols=79  Identities=23%  Similarity=0.354  Sum_probs=52.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhh-----------HHHHHHcCCCEE-E--cCCCCCccHHHHHH
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-----------FEEAKKFGVTDF-V--NTSEHDRPIQEVIA  259 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~-----------~~~~~~~G~~~v-v--~~~~~~~~~~~~i~  259 (361)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++           .+.+++.|.... +  |..+. ..+.+.+.
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~-~~v~~~~~  121 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGA-NIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDE-QQISAAVE  121 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCH-HHHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCC-EEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCH-HHHHHHHH
Confidence            5789999988 9999999998888898 89999888763           233344555432 2  22222 12333333


Q ss_pred             HHcC--CCccEEEEccCC
Q 018072          260 EMTN--GGVDRSVECTGN  275 (361)
Q Consensus       260 ~~~~--~g~Dvvid~~g~  275 (361)
                      ....  +++|++|+++|.
T Consensus       122 ~~~~~~g~iDilVnnAG~  139 (346)
T 3kvo_A          122 KAIKKFGGIDILVNNASA  139 (346)
T ss_dssp             HHHHHHSCCCEEEECCCC
T ss_pred             HHHHHcCCCCEEEECCCC
Confidence            3322  379999999984

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=96.31  E-value=0.018  Score=51.37  Aligned_cols=80  Identities=25%  Similarity=0.371  Sum_probs=51.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCC------------hhhHHH----HHHcCCCEE-EcCCCCC-ccHH
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS------------SKRFEE----AKKFGVTDF-VNTSEHD-RPIQ  255 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~------------~~~~~~----~~~~G~~~v-v~~~~~~-~~~~  255 (361)
                      .|.++||+|+ |++|.+.++.+...|+ +|+.++++            .++++.    +++.|.... +..+-.+ .++.
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   87 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGA-DIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALE   87 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            4689999987 9999999999999999 89999886            333332    334555432 2222222 1233


Q ss_pred             HHHHHHcC--CCccEEEEccCC
Q 018072          256 EVIAEMTN--GGVDRSVECTGN  275 (361)
Q Consensus       256 ~~i~~~~~--~g~Dvvid~~g~  275 (361)
                      +.+.....  +++|++|+++|.
T Consensus        88 ~~~~~~~~~~g~id~lv~nAg~  109 (281)
T 3s55_A           88 SFVAEAEDTLGGIDIAITNAGI  109 (281)
T ss_dssp             HHHHHHHHHHTCCCEEEECCCC
T ss_pred             HHHHHHHHhcCCCCEEEECCCC
Confidence            33333222  379999999883

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=96.30  E-value=0.019  Score=50.81  Aligned_cols=78  Identities=22%  Similarity=0.177  Sum_probs=50.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcC--CCE-EEcCCCCCc-cHHHHHHHHcCCC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFG--VTD-FVNTSEHDR-PIQEVIAEMTNGG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G--~~~-vv~~~~~~~-~~~~~i~~~~~~g  265 (361)
                      .|.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.    +.+  ... .+..+-.+. .+.+.+..  -++
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~g~   85 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEK--YPK   85 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHH--CCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHh--cCC
Confidence            4678999987 8999999998888999 8999999987765432    222  221 222222221 12222222  137


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++++++|.
T Consensus        86 id~lv~nAg~   95 (267)
T 3t4x_A           86 VDILINNLGI   95 (267)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.30  E-value=0.0061  Score=53.02  Aligned_cols=79  Identities=16%  Similarity=0.254  Sum_probs=52.8

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcC--CCeEEEEcCChhhHHHHHHc-CCC-EEEcCCCCC-ccHHHHHHHH---cCC-C
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAG--ASRIIGVDRSSKRFEEAKKF-GVT-DFVNTSEHD-RPIQEVIAEM---TNG-G  265 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g--~~~Vi~~~~~~~~~~~~~~~-G~~-~vv~~~~~~-~~~~~~i~~~---~~~-g  265 (361)
                      +.++||+|+ |++|...++.+...|  . +|+++++++++.+.+.++ +.. ..+..+-.+ ..+.+.+...   .+. +
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~g~~~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~   81 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVKDKNIR-HIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG   81 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCC-EEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred             CCEEEEecCCchHHHHHHHHHHhcCCCc-EEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence            568999988 999999999888888  6 999999998887777665 322 222222222 1233333322   221 6


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++|+++|.
T Consensus        82 id~li~~Ag~   91 (250)
T 1yo6_A           82 LSLLINNAGV   91 (250)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECCcc
Confidence            9999999874

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=96.30  E-value=0.01  Score=52.94  Aligned_cols=79  Identities=18%  Similarity=0.217  Sum_probs=52.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-----HcCCCE-EEcCCCCC-ccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-----KFGVTD-FVNTSEHD-RPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-----~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~  264 (361)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.     ..|... .+..+-.+ .++.+.+.....  +
T Consensus        26 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  104 (277)
T 4fc7_A           26 RDKVAFITGGGSGIGFRIAEIFMRHGC-HTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFG  104 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5789999988 8999999998888899 9999999987655432     234432 22222222 123333333322  3


Q ss_pred             CccEEEEccC
Q 018072          265 GVDRSVECTG  274 (361)
Q Consensus       265 g~Dvvid~~g  274 (361)
                      ++|++|+++|
T Consensus       105 ~id~lv~nAg  114 (277)
T 4fc7_A          105 RIDILINCAA  114 (277)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCc
Confidence            7999999998

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=96.30  E-value=0.017  Score=51.40  Aligned_cols=80  Identities=21%  Similarity=0.269  Sum_probs=51.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCC------------hhhHHHH----HHcCCCEE-EcCCCCC-ccHH
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS------------SKRFEEA----KKFGVTDF-VNTSEHD-RPIQ  255 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~------------~~~~~~~----~~~G~~~v-v~~~~~~-~~~~  255 (361)
                      .|.++||+|+ +++|...++.+...|+ +|++++++            +++++.+    ++.+.... +..+-.+ .++.
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   90 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADGA-DIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLS   90 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            4789999988 8999999998889999 89999876            4444332    33454432 2222222 2233


Q ss_pred             HHHHHHcC--CCccEEEEccCC
Q 018072          256 EVIAEMTN--GGVDRSVECTGN  275 (361)
Q Consensus       256 ~~i~~~~~--~g~Dvvid~~g~  275 (361)
                      +.+.....  +++|++|+++|.
T Consensus        91 ~~~~~~~~~~g~id~lv~nAg~  112 (278)
T 3sx2_A           91 AALQAGLDELGRLDIVVANAGI  112 (278)
T ss_dssp             HHHHHHHHHHCCCCEEEECCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCC
Confidence            33333222  379999999884

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=96.30  E-value=0.02  Score=51.22  Aligned_cols=80  Identities=21%  Similarity=0.265  Sum_probs=50.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHHH----Hc-CCCEE-EcCCCCC-ccHHHHHHHHcC--
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEAK----KF-GVTDF-VNTSEHD-RPIQEVIAEMTN--  263 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~-~~~~~~~~~----~~-G~~~v-v~~~~~~-~~~~~~i~~~~~--  263 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++ ++++.+.+.    +. +.... +..+-.+ .++.+.+.....  
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  102 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKAGA-NIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRF  102 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHC
Confidence            3678999987 9999999999889999 8999988 555544432    22 33322 2222222 223333333322  


Q ss_pred             CCccEEEEccCC
Q 018072          264 GGVDRSVECTGN  275 (361)
Q Consensus       264 ~g~Dvvid~~g~  275 (361)
                      +++|++|+++|.
T Consensus       103 g~iD~lv~nAg~  114 (281)
T 3v2h_A          103 GGADILVNNAGV  114 (281)
T ss_dssp             SSCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999999884

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=96.29  E-value=0.013  Score=52.33  Aligned_cols=81  Identities=23%  Similarity=0.305  Sum_probs=52.0

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcC-------------ChhhHHHH----HHcCCCEE-EcCCCCC-cc
Q 018072          194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-------------SSKRFEEA----KKFGVTDF-VNTSEHD-RP  253 (361)
Q Consensus       194 ~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~-------------~~~~~~~~----~~~G~~~v-v~~~~~~-~~  253 (361)
                      -.|.++||+|+ +++|...++.+...|+ +|+++++             ++++++.+    ++.|.... +..+-.+ .+
T Consensus        13 l~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   91 (280)
T 3pgx_A           13 LQGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAA   91 (280)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence            35789999988 8999999998889999 8999887             55555443    23454332 2122222 12


Q ss_pred             HHHHHHHHcC--CCccEEEEccCC
Q 018072          254 IQEVIAEMTN--GGVDRSVECTGN  275 (361)
Q Consensus       254 ~~~~i~~~~~--~g~Dvvid~~g~  275 (361)
                      +.+.+.....  +++|++++++|.
T Consensus        92 v~~~~~~~~~~~g~id~lvnnAg~  115 (280)
T 3pgx_A           92 LRELVADGMEQFGRLDVVVANAGV  115 (280)
T ss_dssp             HHHHHHHHHHHHCCCCEEEECCCC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCC
Confidence            3333333222  379999999884

>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17

Probab=96.29  E-value=0.0091  Score=54.57  Aligned_cols=99  Identities=14%  Similarity=0.105  Sum_probs=65.1

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCC-------CEEEcCCCCCccHHHHHHHHcCCCc
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV-------TDFVNTSEHDRPIQEVIAEMTNGGV  266 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~-------~~vv~~~~~~~~~~~~i~~~~~~g~  266 (361)
                      ..+.+||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-.       +.-+.....+  ..+.+.. .++.|
T Consensus       107 ~~~~~VLdIG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D--~~~~l~~-~~~~f  182 (314)
T 2b2c_A          107 PDPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGD--GFEFLKN-HKNEF  182 (314)
T ss_dssp             SSCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSC--HHHHHHH-CTTCE
T ss_pred             CCCCEEEEEcCCc-CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEECh--HHHHHHh-cCCCc
Confidence            3557999999865 6667777776554599999999999998876321       1111112222  3344433 34489


Q ss_pred             cEEEEccCC----------hHHHHHHHHHhcCCCcEEEEEc
Q 018072          267 DRSVECTGN----------IDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       267 Dvvid~~g~----------~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      |+|+.....          .+.++.+.+.|+++ |.++.-.
T Consensus       183 D~Ii~d~~~~~~~~~~l~t~~~l~~~~~~Lkpg-G~lv~~~  222 (314)
T 2b2c_A          183 DVIITDSSDPVGPAESLFGQSYYELLRDALKED-GILSSQG  222 (314)
T ss_dssp             EEEEECCC-------------HHHHHHHHEEEE-EEEEEEC
T ss_pred             eEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCC-eEEEEEC
Confidence            999965421          35678889999997 9988764

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=96.29  E-value=0.012  Score=51.49  Aligned_cols=80  Identities=25%  Similarity=0.363  Sum_probs=52.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCCE--EEcCCCCC-ccHHHHHHHHc-CCCccE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD--FVNTSEHD-RPIQEVIAEMT-NGGVDR  268 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~~~--vv~~~~~~-~~~~~~i~~~~-~~g~Dv  268 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+. +++...  .+..+-.+ ..+.+.+.... .+++|+
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~   88 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGA-RLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSI   88 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcE
Confidence            4678999988 9999999998888998 8999999988766543 344332  22222222 12322222211 147999


Q ss_pred             EEEccCC
Q 018072          269 SVECTGN  275 (361)
Q Consensus       269 vid~~g~  275 (361)
                      +|+++|.
T Consensus        89 li~~Ag~   95 (254)
T 2wsb_A           89 LVNSAGI   95 (254)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9999873

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=96.29  E-value=0.049  Score=43.74  Aligned_cols=94  Identities=9%  Similarity=0.086  Sum_probs=59.4

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC-hhhHHHHHH---cCCCEEEcCCCCCccHHHHHHHHcCCCccEEEE
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS-SKRFEEAKK---FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  271 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~-~~~~~~~~~---~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid  271 (361)
                      ..+++|+|+|.+|...++.+...|. +|++++++ +++.+.+.+   .|.. ++.-+..+   .+.+....-.++|+|+-
T Consensus         3 ~~~vlI~G~G~vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~~~~~~-~i~gd~~~---~~~l~~a~i~~ad~vi~   77 (153)
T 1id1_A            3 KDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGDNAD-VIPGDSND---SSVLKKAGIDRCRAILA   77 (153)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCTTCE-EEESCTTS---HHHHHHHTTTTCSEEEE
T ss_pred             CCcEEEECCCHHHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhhcCCCe-EEEcCCCC---HHHHHHcChhhCCEEEE
Confidence            4679999999999999999999998 89999997 465555442   2443 33222222   22343332237999999


Q ss_pred             ccCChHHH---HHHHHHhcCCCcEEEE
Q 018072          272 CTGNIDNM---ISAFECVHDGWGVAVL  295 (361)
Q Consensus       272 ~~g~~~~~---~~~~~~l~~~~G~iv~  295 (361)
                      ++++.+.-   ....+.+.+. .+++.
T Consensus        78 ~~~~d~~n~~~~~~a~~~~~~-~~ii~  103 (153)
T 1id1_A           78 LSDNDADNAFVVLSAKDMSSD-VKTVL  103 (153)
T ss_dssp             CSSCHHHHHHHHHHHHHHTSS-SCEEE
T ss_pred             ecCChHHHHHHHHHHHHHCCC-CEEEE
Confidence            99885432   2333444443 45544

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=96.29  E-value=0.018  Score=50.26  Aligned_cols=100  Identities=22%  Similarity=0.257  Sum_probs=69.6

Q ss_pred             hhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCC--E-EEcCCCCCccHHHHHH
Q 018072          187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT--D-FVNTSEHDRPIQEVIA  259 (361)
Q Consensus       187 ~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~--~-vv~~~~~~~~~~~~i~  259 (361)
                      +.....++++.+||-+|+|. |..+..+++..+. +|+++|.+++.++.+++    .|..  . ++..+-.+  +     
T Consensus        28 l~~~~~~~~~~~VLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~--~-----   98 (256)
T 1nkv_A           28 LGRVLRMKPGTRILDLGSGS-GEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAG--Y-----   98 (256)
T ss_dssp             HHHHTCCCTTCEEEEETCTT-CHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTT--C-----
T ss_pred             HHHhcCCCCCCEEEEECCCC-CHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHh--C-----
Confidence            34556789999999999977 8888888888887 99999999988877754    3432  1 22111111  1     


Q ss_pred             HHcCCCccEEEEcc------CChHHHHHHHHHhcCCCcEEEEEc
Q 018072          260 EMTNGGVDRSVECT------GNIDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       260 ~~~~~g~Dvvid~~------g~~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                       ..++.||+|+..-      .....+..+.+.|+++ |++++..
T Consensus        99 -~~~~~fD~V~~~~~~~~~~~~~~~l~~~~r~Lkpg-G~l~~~~  140 (256)
T 1nkv_A           99 -VANEKCDVAACVGATWIAGGFAGAEELLAQSLKPG-GIMLIGE  140 (256)
T ss_dssp             -CCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEE-EEEEEEE
T ss_pred             -CcCCCCCEEEECCChHhcCCHHHHHHHHHHHcCCC-eEEEEec
Confidence             0134799999621      2345678888899997 9988753

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=96.29  E-value=0.018  Score=51.92  Aligned_cols=79  Identities=19%  Similarity=0.265  Sum_probs=51.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCC------------hhhHHH----HHHcCCCEE-EcCCCCC-ccHH
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS------------SKRFEE----AKKFGVTDF-VNTSEHD-RPIQ  255 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~------------~~~~~~----~~~~G~~~v-v~~~~~~-~~~~  255 (361)
                      .|.++||+|+ +++|.+.++.+...|+ +|++++++            +++++.    +++.|.... +..+-.+ .++.
T Consensus        27 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~  105 (299)
T 3t7c_A           27 EGKVAFITGAARGQGRSHAITLAREGA-DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQ  105 (299)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence            4789999988 8999999998889999 89998876            444333    334555432 2222222 1233


Q ss_pred             HHHHHHcC--CCccEEEEccC
Q 018072          256 EVIAEMTN--GGVDRSVECTG  274 (361)
Q Consensus       256 ~~i~~~~~--~g~Dvvid~~g  274 (361)
                      +.+.....  +++|++|+++|
T Consensus       106 ~~~~~~~~~~g~iD~lv~nAg  126 (299)
T 3t7c_A          106 AAVDDGVTQLGRLDIVLANAA  126 (299)
T ss_dssp             HHHHHHHHHHSCCCEEEECCC
T ss_pred             HHHHHHHHHhCCCCEEEECCC
Confidence            33333222  37999999987

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=96.29  E-value=0.04  Score=47.15  Aligned_cols=76  Identities=14%  Similarity=0.108  Sum_probs=55.8

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  276 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~  276 (361)
                      +|+|+|+|.+|...++.+...|. .|+++++++++.+.+. ..|... +.-+..+   .+.+....-.++|+++-+++..
T Consensus         2 ~iiIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~l~~~~~~~~-i~gd~~~---~~~l~~a~i~~ad~vi~~~~~d   76 (218)
T 3l4b_C            2 KVIIIGGETTAYYLARSMLSRKY-GVVIINKDRELCEEFAKKLKATI-IHGDGSH---KEILRDAEVSKNDVVVILTPRD   76 (218)
T ss_dssp             CEEEECCHHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHHSSSEE-EESCTTS---HHHHHHHTCCTTCEEEECCSCH
T ss_pred             EEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHcCCeE-EEcCCCC---HHHHHhcCcccCCEEEEecCCc
Confidence            58999999999999999999998 8999999999988765 466543 3333322   2234443233799999999985


Q ss_pred             HH
Q 018072          277 DN  278 (361)
Q Consensus       277 ~~  278 (361)
                      ..
T Consensus        77 ~~   78 (218)
T 3l4b_C           77 EV   78 (218)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=96.28  E-value=0.01  Score=51.80  Aligned_cols=78  Identities=26%  Similarity=0.313  Sum_probs=51.1

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-c----CCCE-EEcCCCCC-ccHHHHHHHHcC--CC
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F----GVTD-FVNTSEHD-RPIQEVIAEMTN--GG  265 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~----G~~~-vv~~~~~~-~~~~~~i~~~~~--~g  265 (361)
                      +.++||+|+ |++|...+..+...|+ +|+++++++++.+.+.+ +    +... .+..+-.+ ..+.+.+.....  ++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGD-RVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGA   80 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            568999988 9999999998888998 89999999877665432 2    3222 22222222 123333332221  36


Q ss_pred             ccEEEEccC
Q 018072          266 VDRSVECTG  274 (361)
Q Consensus       266 ~Dvvid~~g  274 (361)
                      +|++|+++|
T Consensus        81 id~li~~Ag   89 (250)
T 2cfc_A           81 IDVLVNNAG   89 (250)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=96.28  E-value=0.0081  Score=51.79  Aligned_cols=100  Identities=20%  Similarity=0.232  Sum_probs=69.5

Q ss_pred             hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCC---C-EEEcCCCCCccHHHHHHHHcC
Q 018072          188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV---T-DFVNTSEHDRPIQEVIAEMTN  263 (361)
Q Consensus       188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~---~-~vv~~~~~~~~~~~~i~~~~~  263 (361)
                      .+...++++++||-+|+|. |..+..+++.. . +|+++|.+++.++.+++...   . .++.. +    ..+..  ...
T Consensus        63 ~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~-~-~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~-d----~~~~~--~~~  132 (231)
T 1vbf_A           63 LDELDLHKGQKVLEIGTGI-GYYTALIAEIV-D-KVVSVEINEKMYNYASKLLSYYNNIKLILG-D----GTLGY--EEE  132 (231)
T ss_dssp             HHHTTCCTTCEEEEECCTT-SHHHHHHHHHS-S-EEEEEESCHHHHHHHHHHHTTCSSEEEEES-C----GGGCC--GGG
T ss_pred             HHhcCCCCCCEEEEEcCCC-CHHHHHHHHHc-C-EEEEEeCCHHHHHHHHHHHhhcCCeEEEEC-C----ccccc--ccC
Confidence            4556788999999999986 88888888774 4 99999999999988876421   1 12211 1    11100  012


Q ss_pred             CCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcC
Q 018072          264 GGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       264 ~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      +.||+|+....-......+.+.|+++ |++++.-.
T Consensus       133 ~~fD~v~~~~~~~~~~~~~~~~L~pg-G~l~~~~~  166 (231)
T 1vbf_A          133 KPYDRVVVWATAPTLLCKPYEQLKEG-GIMILPIG  166 (231)
T ss_dssp             CCEEEEEESSBBSSCCHHHHHTEEEE-EEEEEEEC
T ss_pred             CCccEEEECCcHHHHHHHHHHHcCCC-cEEEEEEc
Confidence            47999998765545567888999997 99887643

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=96.28  E-value=0.0071  Score=53.00  Aligned_cols=80  Identities=25%  Similarity=0.380  Sum_probs=51.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCC-hhhHHHH----HHcCCCE-EEcCCCCC-ccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS-SKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~-~~~~~~~----~~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~  264 (361)
                      .+.++||+|+ |++|...+..+...|+ +|++++++ +++.+.+    +..+... .+..+-.+ ..+.+.+.....  +
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   84 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGA-KVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFG   84 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            3578999988 9999999998888898 89999888 6655443    2234322 22222222 123333333221  3


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      ++|++|+++|.
T Consensus        85 ~id~vi~~Ag~   95 (258)
T 3afn_B           85 GIDVLINNAGG   95 (258)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=96.27  E-value=0.017  Score=52.04  Aligned_cols=79  Identities=14%  Similarity=0.201  Sum_probs=52.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-c----CCCE-EEcCCCCC-ccHHHHHHHHc--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F----GVTD-FVNTSEHD-RPIQEVIAEMT--NG  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~----G~~~-vv~~~~~~-~~~~~~i~~~~--~~  264 (361)
                      .+.++||+|+ |++|...+..+...|+ +|+++++++++.+.+.+ +    +... .+..+-.+ ..+.+.+....  .+
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  103 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG  103 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence            4678999988 9999999998888998 89999999877654322 2    4432 22222222 12333333321  23


Q ss_pred             CccEEEEccC
Q 018072          265 GVDRSVECTG  274 (361)
Q Consensus       265 g~Dvvid~~g  274 (361)
                      .+|++|+++|
T Consensus       104 ~id~li~~Ag  113 (302)
T 1w6u_A          104 HPNIVINNAA  113 (302)
T ss_dssp             SCSEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7899999988

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=96.27  E-value=0.011  Score=52.55  Aligned_cols=80  Identities=15%  Similarity=0.120  Sum_probs=51.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHHHH-c----CCCE-EE--cCCCCC---ccHHHHHHHH
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEAKK-F----GVTD-FV--NTSEHD---RPIQEVIAEM  261 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~-~~~~~~~~~~-~----G~~~-vv--~~~~~~---~~~~~~i~~~  261 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++ ++++.+.+.+ +    +... .+  |..+.+   ..+.+.+...
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   88 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCS   88 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHH
Confidence            4678999987 9999999998888998 8999998 8776654422 2    4432 22  333320   1233333322


Q ss_pred             cC--CCccEEEEccCC
Q 018072          262 TN--GGVDRSVECTGN  275 (361)
Q Consensus       262 ~~--~g~Dvvid~~g~  275 (361)
                      ..  +++|++|+++|.
T Consensus        89 ~~~~g~id~lv~nAg~  104 (276)
T 1mxh_A           89 FRAFGRCDVLVNNASA  104 (276)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHhcCCCCEEEECCCC
Confidence            21  379999999873

>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}

Probab=96.27  E-value=0.046  Score=50.03  Aligned_cols=131  Identities=18%  Similarity=0.215  Sum_probs=83.1

Q ss_pred             EEEEEcCCHHHHHHHHHHHHc-CCCeEE-EEcCChhhHHHH-HHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072          198 SVAVFGLGAVGLAAAEGARIA-GASRII-GVDRSSKRFEEA-KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~-g~~~Vi-~~~~~~~~~~~~-~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      +|.|+|+|.+|...+..+... +. +++ +.++++++.+.+ +++|+.  +  .+    +.+.+.   ...+|+|+.++.
T Consensus         5 ~vgiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~~~~~~~~--~--~~----~~~~l~---~~~~D~V~i~tp   72 (331)
T 4hkt_A            5 RFGLLGAGRIGKVHAKAVSGNADA-RLVAVADAFPAAAEAIAGAYGCE--V--RT----IDAIEA---AADIDAVVICTP   72 (331)
T ss_dssp             EEEEECCSHHHHHHHHHHHHCTTE-EEEEEECSSHHHHHHHHHHTTCE--E--CC----HHHHHH---CTTCCEEEECSC
T ss_pred             EEEEECCCHHHHHHHHHHhhCCCc-EEEEEECCCHHHHHHHHHHhCCC--c--CC----HHHHhc---CCCCCEEEEeCC
Confidence            689999999999888877765 56 555 678888876654 557764  2  22    444433   236899999999


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecC-hhhhc--cccEEEEeeecCCCcCCcHHHHHHHHHcCCc
Q 018072          275 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKVI  344 (361)
Q Consensus       275 ~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~-~~~~~--~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l  344 (361)
                      .....+.+..++..  |+-+++..+-....-... .....  +++.+.-.+..++  ...+.++.+++++|+|
T Consensus        73 ~~~h~~~~~~al~~--gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~--~p~~~~~~~~i~~g~i  141 (331)
T 4hkt_A           73 TDTHADLIERFARA--GKAIFCEKPIDLDAERVRACLKVVSDTKAKLMVGFNRRF--DPHFMAVRKAIDDGRI  141 (331)
T ss_dssp             GGGHHHHHHHHHHT--TCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCGGGG--CHHHHHHHHHHHTTTT
T ss_pred             chhHHHHHHHHHHc--CCcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEcccccC--CHHHHHHHHHHHcCCC
Confidence            87778888888876  566777543211111111 01111  4555543333333  4678888999998876

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=96.26  E-value=0.016  Score=52.93  Aligned_cols=76  Identities=20%  Similarity=0.261  Sum_probs=48.6

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhH--HHHHHcCC--C-EEEcCCCCCccHHHHHHHHcCC-CccE
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRF--EEAKKFGV--T-DFVNTSEHDRPIQEVIAEMTNG-GVDR  268 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~--~~~~~~G~--~-~vv~~~~~~~~~~~~i~~~~~~-g~Dv  268 (361)
                      +.+|||+|+ |.+|...++.+...|. +|+++++++++.  +.++.++.  . ..+..+-.+   .+.+.+...+ ++|+
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d---~~~~~~~~~~~~~d~   78 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGY-EVYGADRRSGEFASWRLKELGIENDVKIIHMDLLE---FSNIIRTIEKVQPDE   78 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTC---HHHHHHHHHHHCCSE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCCcccccccHhhccccCceeEEECCCCC---HHHHHHHHHhcCCCE
Confidence            578999998 9999999998888898 999998887543  23344421  1 122111122   1223332222 5899


Q ss_pred             EEEccCC
Q 018072          269 SVECTGN  275 (361)
Q Consensus       269 vid~~g~  275 (361)
                      ||++++.
T Consensus        79 vih~A~~   85 (345)
T 2z1m_A           79 VYNLAAQ   85 (345)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999874

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=96.26  E-value=0.007  Score=54.04  Aligned_cols=74  Identities=18%  Similarity=0.148  Sum_probs=51.9

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  273 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~-~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~  273 (361)
                      ++.+++|+|+|++|.++++.+...|. +|++++++.++.+.+ ++++....++..+.+     .+.+   +++|++++++
T Consensus       118 ~~k~vlViGaGg~g~a~a~~L~~~G~-~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~-----~~~~---~~~DivVn~t  188 (271)
T 1nyt_A          118 PGLRILLIGAGGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTGSIQALSMD-----ELEG---HEFDLIINAT  188 (271)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGSSEEECCSG-----GGTT---CCCSEEEECC
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHhhccCCeeEecHH-----Hhcc---CCCCEEEECC
Confidence            57899999999999999999999996 999999998886544 445431001111111     1111   4799999999


Q ss_pred             CChH
Q 018072          274 GNID  277 (361)
Q Consensus       274 g~~~  277 (361)
                      +...
T Consensus       189 ~~~~  192 (271)
T 1nyt_A          189 SSGI  192 (271)
T ss_dssp             SCGG
T ss_pred             CCCC
Confidence            8743

>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}

Probab=96.25  E-value=0.034  Score=51.48  Aligned_cols=134  Identities=16%  Similarity=0.179  Sum_probs=83.8

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHH-HHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072          197 SSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEA-KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~-g~~~Vi~~~~~~~~~~~~-~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      -+|.|+|+|.+|...+..++.. +.+-+.+.++++++.+.+ +++|+..   +.  +  +.+.+.   +..+|+|+.++.
T Consensus         6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~---~~--~--~~~~l~---~~~~D~V~i~tp   75 (354)
T 3db2_A            6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAG---DA--T--MEALLA---REDVEMVIITVP   75 (354)
T ss_dssp             EEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCC---CS--S--HHHHHH---CSSCCEEEECSC
T ss_pred             ceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCC---cC--C--HHHHhc---CCCCCEEEEeCC
Confidence            4799999999998887777666 663344668888877654 5577643   22  1  444432   237999999999


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecCh-hhhc--cccEEEEeeecCCCcCCcHHHHHHHHHcCCc
Q 018072          275 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKVI  344 (361)
Q Consensus       275 ~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~~--~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l  344 (361)
                      .....+.+..++..  |+-+++..+-....-.... ....  +++.+.-.+..++  ...+.++.+++++|+|
T Consensus        76 ~~~h~~~~~~al~~--gk~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~R~--~p~~~~~k~~i~~g~i  144 (354)
T 3db2_A           76 NDKHAEVIEQCARS--GKHIYVEKPISVSLDHAQRIDQVIKETGVKFLCGHSSRR--LGALRKMKEMIDTKEI  144 (354)
T ss_dssp             TTSHHHHHHHHHHT--TCEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEECGGGG--SHHHHHHHHHHHTTTT
T ss_pred             hHHHHHHHHHHHHc--CCEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEeechhc--CHHHHHHHHHHhcCCC
Confidence            87778888888876  5667775432111111110 1111  4554433333333  4678888899998876

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=96.24  E-value=0.01  Score=52.75  Aligned_cols=80  Identities=18%  Similarity=0.254  Sum_probs=51.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHH----HHcCCCE-EEcCCCCC-ccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~-~~~~~~~~----~~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~  264 (361)
                      .|.++||+|+ |++|...++.+...|+ +|+++++ +++..+.+    ++.+... ++..+-.+ .++.+.+.+...  +
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g  106 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGL-KVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDG  106 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4678999988 9999999998888999 8888888 44443333    3345443 23222222 123333333322  3


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      ++|++|+++|.
T Consensus       107 ~id~li~nAg~  117 (271)
T 4iin_A          107 GLSYLVNNAGV  117 (271)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999999884

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=96.24  E-value=0.012  Score=51.79  Aligned_cols=79  Identities=24%  Similarity=0.254  Sum_probs=50.5

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhh--HHHH-HH---cCCCE-EEcCCCCC-ccHHHHHHHHcC--C
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR--FEEA-KK---FGVTD-FVNTSEHD-RPIQEVIAEMTN--G  264 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~--~~~~-~~---~G~~~-vv~~~~~~-~~~~~~i~~~~~--~  264 (361)
                      +.++||+|+ |++|...++.+...|+ +|+++++++++  .+.+ ++   .+... .+..+-.+ ..+.+.+.....  +
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   80 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGF-DIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLG   80 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            578999988 9999999988888898 89999998776  4433 22   24332 22222222 123333333221  3


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      ++|++|+++|.
T Consensus        81 ~iD~lv~nAg~   91 (258)
T 3a28_C           81 GFDVLVNNAGI   91 (258)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*

Probab=96.23  E-value=0.05  Score=50.31  Aligned_cols=134  Identities=14%  Similarity=0.089  Sum_probs=83.5

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHc--CCCeEEEEcCChhhHHHH-HHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072          197 SSVAVFGLGAVGLAAAEGARIA--GASRIIGVDRSSKRFEEA-KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  273 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~--g~~~Vi~~~~~~~~~~~~-~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~  273 (361)
                      -+|.|+|+|.+|...+..++..  +.+-+.+.++++++.+.+ +++|+ ..+  .+    +.+.+..   ..+|+|+.++
T Consensus        14 ~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~-~~~--~~----~~~ll~~---~~~D~V~i~t   83 (354)
T 3q2i_A           14 IRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGA-RGH--AS----LTDMLAQ---TDADIVILTT   83 (354)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCC-EEE--SC----HHHHHHH---CCCSEEEECS
T ss_pred             ceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCC-cee--CC----HHHHhcC---CCCCEEEECC
Confidence            4799999999998877777766  563344678888886654 56786 332  11    4444432   3699999999


Q ss_pred             CChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecC-hhhhc--cccEEEEeeecCCCcCCcHHHHHHHHHcCCc
Q 018072          274 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKVI  344 (361)
Q Consensus       274 g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~-~~~~~--~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l  344 (361)
                      ......+.+..++..  |+-+++..+-....-... .....  +++.+.-.+..++  ...+.++.+++++|+|
T Consensus        84 p~~~h~~~~~~al~~--gk~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~~~~r~--~p~~~~~k~~i~~g~i  153 (354)
T 3q2i_A           84 PSGLHPTQSIECSEA--GFHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVKQNRR--NATLQLLKRAMQEKRF  153 (354)
T ss_dssp             CGGGHHHHHHHHHHT--TCEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECCGGGG--SHHHHHHHHHHHTTTT
T ss_pred             CcHHHHHHHHHHHHC--CCCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEEcccC--CHHHHHHHHHHhcCCC
Confidence            987777788888875  666777543211111110 01111  4554432222222  3578888899998876

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=96.23  E-value=0.0079  Score=53.66  Aligned_cols=78  Identities=14%  Similarity=0.196  Sum_probs=51.6

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCC--C-EEEcCCCCC-ccHHHHHHHHcC--CCccE
Q 018072          197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGV--T-DFVNTSEHD-RPIQEVIAEMTN--GGVDR  268 (361)
Q Consensus       197 ~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~--~-~vv~~~~~~-~~~~~~i~~~~~--~g~Dv  268 (361)
                      .++||+|+ |++|...++.+...|+ +|+++++++++++.+.+ +..  . ..+..+-.+ ..+.+.+.....  +++|+
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  100 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGW-SLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRG  100 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCE
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence            68999988 8999999998888998 89999999887766533 321  1 222222222 123333333222  26899


Q ss_pred             EEEccCC
Q 018072          269 SVECTGN  275 (361)
Q Consensus       269 vid~~g~  275 (361)
                      +|+++|.
T Consensus       101 lvnnAG~  107 (272)
T 2nwq_A          101 LINNAGL  107 (272)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999874

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=96.23  E-value=0.0097  Score=52.62  Aligned_cols=80  Identities=24%  Similarity=0.410  Sum_probs=52.5

Q ss_pred             CCCEEEEEcC-C-HHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCC-C-EEEcCCCCC-ccHHHHHHHHcC--
Q 018072          195 RGSSVAVFGL-G-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGV-T-DFVNTSEHD-RPIQEVIAEMTN--  263 (361)
Q Consensus       195 ~g~~VlI~G~-g-~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~-~-~vv~~~~~~-~~~~~~i~~~~~--  263 (361)
                      .+.++||+|+ | ++|...++.+...|+ +|+.+++++++.+.+.+    .+. . ..+..+-.+ ..+.+.+.....  
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   99 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKA   99 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence            4789999998 7 799999998888898 89999999887665432    232 2 222222222 123333333222  


Q ss_pred             CCccEEEEccCC
Q 018072          264 GGVDRSVECTGN  275 (361)
Q Consensus       264 ~g~Dvvid~~g~  275 (361)
                      +.+|++|+++|.
T Consensus       100 g~id~li~~Ag~  111 (266)
T 3o38_A          100 GRLDVLVNNAGL  111 (266)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCcEEEECCCc
Confidence            378999999983

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=96.22  E-value=0.018  Score=51.43  Aligned_cols=70  Identities=17%  Similarity=0.166  Sum_probs=51.4

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCC--CEEEcCCCCCccHHHHHHHHcCCCccEEEE
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGV--TDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  271 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~-~~~G~--~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid  271 (361)
                      .+.+++|+|+|++|.+++..+...|+.+|+++.++.+|.+.+ ++++.  ...+.+.+           +....+|+||+
T Consensus       119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~-----------l~~~~~DivIn  187 (272)
T 3pwz_A          119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEA-----------LEGQSFDIVVN  187 (272)
T ss_dssp             TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGG-----------GTTCCCSEEEE
T ss_pred             cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHH-----------hcccCCCEEEE
Confidence            578999999999999999988889977999999999886655 44543  12222211           11136899999


Q ss_pred             ccCC
Q 018072          272 CTGN  275 (361)
Q Consensus       272 ~~g~  275 (361)
                      +++.
T Consensus       188 aTp~  191 (272)
T 3pwz_A          188 ATSA  191 (272)
T ss_dssp             CSSG
T ss_pred             CCCC
Confidence            9864

>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*

Probab=96.22  E-value=0.044  Score=50.71  Aligned_cols=134  Identities=16%  Similarity=0.087  Sum_probs=83.0

Q ss_pred             CEEEEEcCCHHHH-HHHHHHHHc-CCCeEEEEcCChhhHHHH-HHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072          197 SSVAVFGLGAVGL-AAAEGARIA-GASRIIGVDRSSKRFEEA-KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  273 (361)
Q Consensus       197 ~~VlI~G~g~vG~-~a~~~a~~~-g~~~Vi~~~~~~~~~~~~-~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~  273 (361)
                      -+|.|+|+|.+|. ..+..++.. +.+-+.+.++++++.+.+ +++|+...-     +  +.+.+   ....+|+|+.++
T Consensus        28 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~~-----~--~~~ll---~~~~~D~V~i~t   97 (350)
T 3rc1_A           28 IRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPVE-----G--YPALL---ERDDVDAVYVPL   97 (350)
T ss_dssp             EEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEEE-----S--HHHHH---TCTTCSEEEECC
T ss_pred             eEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCcC-----C--HHHHh---cCCCCCEEEECC
Confidence            4799999999998 566666665 663334668888776654 567875431     1  33332   123799999999


Q ss_pred             CChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecCh-hhhc--cccEEEEeeecCCCcCCcHHHHHHHHHcCCc
Q 018072          274 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKVI  344 (361)
Q Consensus       274 g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~~--~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l  344 (361)
                      ......+.+..+|..  |+-+++-.+-....-.... ....  +++.+.-.+..++  ...+.++-+++++|+|
T Consensus        98 p~~~h~~~~~~al~a--Gk~Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~--~p~~~~~k~~i~~G~i  167 (350)
T 3rc1_A           98 PAVLHAEWIDRALRA--GKHVLAEKPLTTDRPQAERLFAVARERGLLLMENFMFLH--HPQHRQVADMLDEGVI  167 (350)
T ss_dssp             CGGGHHHHHHHHHHT--TCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEECGGGG--CTHHHHHHHHHHTTTT
T ss_pred             CcHHHHHHHHHHHHC--CCcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEecccC--CHHHHHHHHHHhcCCC
Confidence            987788888888875  6667775433111111110 1111  4555443333333  4678888999998876

>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}

Probab=96.21  E-value=0.021  Score=49.53  Aligned_cols=95  Identities=15%  Similarity=0.122  Sum_probs=66.2

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEE
Q 018072          192 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  271 (361)
Q Consensus       192 ~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid  271 (361)
                      .++++.+||=+|+|. |..+..+++. |. +|+++|.+++.++.+++. . .++   ..+  ..+.+..+.++.||+|+.
T Consensus        38 ~~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~gvD~s~~~~~~a~~~-~-~~~---~~d--~~~~~~~~~~~~fD~i~~  107 (240)
T 3dli_A           38 YFKGCRRVLDIGCGR-GEFLELCKEE-GI-ESIGVDINEDMIKFCEGK-F-NVV---KSD--AIEYLKSLPDKYLDGVMI  107 (240)
T ss_dssp             GTTTCSCEEEETCTT-THHHHHHHHH-TC-CEEEECSCHHHHHHHHTT-S-EEE---CSC--HHHHHHTSCTTCBSEEEE
T ss_pred             hhcCCCeEEEEeCCC-CHHHHHHHhC-CC-cEEEEECCHHHHHHHHhh-c-cee---ecc--HHHHhhhcCCCCeeEEEE
Confidence            357889999999864 5556666665 77 899999999999998876 2 222   222  333333344458999997


Q ss_pred             cc-----CC---hHHHHHHHHHhcCCCcEEEEEc
Q 018072          272 CT-----GN---IDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       272 ~~-----g~---~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      .-     ..   ...+..+.+.|+++ |++++..
T Consensus       108 ~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~  140 (240)
T 3dli_A          108 SHFVEHLDPERLFELLSLCYSKMKYS-SYIVIES  140 (240)
T ss_dssp             ESCGGGSCGGGHHHHHHHHHHHBCTT-CCEEEEE
T ss_pred             CCchhhCCcHHHHHHHHHHHHHcCCC-cEEEEEe
Confidence            32     22   35678888999997 9988764

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=96.20  E-value=0.012  Score=52.71  Aligned_cols=80  Identities=24%  Similarity=0.371  Sum_probs=51.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhh-----------HHHHHHcCCCEE-EcCCCCC-ccHHHHHHH
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-----------FEEAKKFGVTDF-VNTSEHD-RPIQEVIAE  260 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~-----------~~~~~~~G~~~v-v~~~~~~-~~~~~~i~~  260 (361)
                      .+.++||+|+ +++|...++.+...|+ +|+.+++++++           .+.+++.+.... +..+-.+ .++.+.+..
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   86 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGA-NVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAK   86 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            4679999988 8999999998888899 89999888762           223344455332 2222222 123333333


Q ss_pred             HcC--CCccEEEEccCC
Q 018072          261 MTN--GGVDRSVECTGN  275 (361)
Q Consensus       261 ~~~--~g~Dvvid~~g~  275 (361)
                      ...  +++|++|+++|.
T Consensus        87 ~~~~~g~id~lvnnAg~  103 (285)
T 3sc4_A           87 TVEQFGGIDICVNNASA  103 (285)
T ss_dssp             HHHHHSCCSEEEECCCC
T ss_pred             HHHHcCCCCEEEECCCC
Confidence            322  379999999884

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=96.20  E-value=0.015  Score=51.97  Aligned_cols=80  Identities=23%  Similarity=0.250  Sum_probs=51.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCC----------------hhhHHHH----HHcCCCEE-EcCCCCC-
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS----------------SKRFEEA----KKFGVTDF-VNTSEHD-  251 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~----------------~~~~~~~----~~~G~~~v-v~~~~~~-  251 (361)
                      .|.++||+|+ +++|...++.+...|+ +|++++++                +++++.+    ++.+.... +..+-.+ 
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   88 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGA-DIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDY   88 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCH
Confidence            5789999988 8999999998889999 89998876                4444433    22344332 2222222 


Q ss_pred             ccHHHHHHHHcC--CCccEEEEccCC
Q 018072          252 RPIQEVIAEMTN--GGVDRSVECTGN  275 (361)
Q Consensus       252 ~~~~~~i~~~~~--~g~Dvvid~~g~  275 (361)
                      .++.+.+.....  +++|++|+++|.
T Consensus        89 ~~v~~~~~~~~~~~g~id~lv~nAg~  114 (286)
T 3uve_A           89 DALKAAVDSGVEQLGRLDIIVANAGI  114 (286)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHHHHHhCCCCEEEECCcc
Confidence            123333333222  379999999873

>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}

Probab=96.17  E-value=0.041  Score=50.66  Aligned_cols=133  Identities=20%  Similarity=0.289  Sum_probs=82.6

Q ss_pred             EEEEEcCCHHHHHHHHHHHHc-CCCeEE-EEcCChhhHHH-HHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072          198 SVAVFGLGAVGLAAAEGARIA-GASRII-GVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~-g~~~Vi-~~~~~~~~~~~-~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      +|.|+|+|.+|...+..++.. +. .++ +.++++++.+. ++++|...++.  +    +.+.+.   ...+|+|+.++.
T Consensus         4 rvgiIG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~~~~~~~~~~~~--~----~~~ll~---~~~~D~V~i~tp   73 (344)
T 3ezy_A            4 RIGVIGLGRIGTIHAENLKMIDDA-ILYAISDVREDRLREMKEKLGVEKAYK--D----PHELIE---DPNVDAVLVCSS   73 (344)
T ss_dssp             EEEEECCSHHHHHHHHHGGGSTTE-EEEEEECSCHHHHHHHHHHHTCSEEES--S----HHHHHH---CTTCCEEEECSC
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCc-EEEEEECCCHHHHHHHHHHhCCCceeC--C----HHHHhc---CCCCCEEEEcCC
Confidence            689999999998877766554 55 555 56888887655 45678654442  1    443332   237999999999


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecC-hhhhc--cccEEEEeeecCCCcCCcHHHHHHHHHcCCc
Q 018072          275 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKVI  344 (361)
Q Consensus       275 ~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~-~~~~~--~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l  344 (361)
                      .....+.+..++..  |+-+++..+-....-... .....  +++.+.-.+..++  ...+.++.+++++|+|
T Consensus        74 ~~~h~~~~~~al~~--gk~v~~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~R~--~p~~~~~k~~i~~G~i  142 (344)
T 3ezy_A           74 TNTHSELVIACAKA--KKHVFCEKPLSLNLADVDRMIEETKKADVILFTGFNRRF--DRNFKKLKEAVENGTI  142 (344)
T ss_dssp             GGGHHHHHHHHHHT--TCEEEEESCSCSCHHHHHHHHHHHHHHTCCEEEECGGGG--CHHHHHHHHHHHTTTT
T ss_pred             CcchHHHHHHHHhc--CCeEEEECCCCCCHHHHHHHHHHHHHhCCcEEEeecccC--CHHHHHHHHHHHcCCC
Confidence            87777888888876  566666543211111111 11111  4554443333333  4678888899998876

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=96.17  E-value=0.0096  Score=53.03  Aligned_cols=97  Identities=18%  Similarity=0.177  Sum_probs=61.5

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHc--CCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072          198 SVAVFGL-GAVGLAAAEGARIA--GASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       198 ~VlI~G~-g~vG~~a~~~a~~~--g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      +|||+|+ |.+|...++.+...  |. +|+++++++++.+.+...+...+ ..+-.+   .+.+..... ++|+||++++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~l~~~~~~~~-~~D~~d---~~~l~~~~~-~~d~vi~~a~   75 (287)
T 2jl1_A            2 SIAVTGATGQLGGLVIQHLLKKVPAS-QIIAIVRNVEKASTLADQGVEVR-HGDYNQ---PESLQKAFA-GVSKLLFISG   75 (287)
T ss_dssp             CEEETTTTSHHHHHHHHHHTTTSCGG-GEEEEESCTTTTHHHHHTTCEEE-ECCTTC---HHHHHHHTT-TCSEEEECCC
T ss_pred             eEEEEcCCchHHHHHHHHHHHhCCCC-eEEEEEcCHHHHhHHhhcCCeEE-EeccCC---HHHHHHHHh-cCCEEEEcCC
Confidence            5899998 99999999888777  77 89999898877666555555432 222222   123444333 6899999987


Q ss_pred             Ch-------HHHHHHHHHhcCCC-cEEEEEcCCC
Q 018072          275 NI-------DNMISAFECVHDGW-GVAVLVGVPS  300 (361)
Q Consensus       275 ~~-------~~~~~~~~~l~~~~-G~iv~~g~~~  300 (361)
                      ..       ......++.+...+ ++++.++...
T Consensus        76 ~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~  109 (287)
T 2jl1_A           76 PHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAF  109 (287)
T ss_dssp             CCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEETT
T ss_pred             CCcCchHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence            41       12233444444331 4888887543

>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}

Probab=96.17  E-value=0.038  Score=51.53  Aligned_cols=135  Identities=16%  Similarity=0.108  Sum_probs=83.0

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHc--------CCCeEEEEcCChhhHHH-HHHcCCCEEEcCCCCCccHHHHHHHHcCCCcc
Q 018072          197 SSVAVFGLGAVGLAAAEGARIA--------GASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVD  267 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~--------g~~~Vi~~~~~~~~~~~-~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~D  267 (361)
                      =+|.|+|+|.+|...+...+..        +++-|-+.++++++.+. ++++|...++.  +    +.+.+.   +..+|
T Consensus        26 irvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~--d----~~ell~---~~~iD   96 (393)
T 4fb5_A           26 LGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATA--D----WRALIA---DPEVD   96 (393)
T ss_dssp             CEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEES--C----HHHHHH---CTTCC
T ss_pred             ccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecC--C----HHHHhc---CCCCc
Confidence            5899999999998765543321        44334555778777655 46689876552  1    444442   24799


Q ss_pred             EEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecCh-hhhc--cccEEEEeeecCCCcCCcHHHHHHHHHcCCc
Q 018072          268 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKVI  344 (361)
Q Consensus       268 vvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~~--~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l  344 (361)
                      +|+.++....-.+.+..+|..  |+=|++-.+-....-.... ....  +++.+.-.+..++  ...+.++-+++++|+|
T Consensus        97 aV~IatP~~~H~~~a~~al~a--GkhVl~EKPla~~~~ea~~l~~~a~~~g~~l~vg~~~R~--~p~~~~~k~~i~~G~i  172 (393)
T 4fb5_A           97 VVSVTTPNQFHAEMAIAALEA--GKHVWCEKPMAPAYADAERMLATAERSGKVAALGYNYIQ--NPVMRHIRKLVGDGVI  172 (393)
T ss_dssp             EEEECSCGGGHHHHHHHHHHT--TCEEEECSCSCSSHHHHHHHHHHHHHSSSCEEECCGGGG--CHHHHHHHHHHHTTTT
T ss_pred             EEEECCChHHHHHHHHHHHhc--CCeEEEccCCcccHHHHHHhhhhHHhcCCcccccccccc--ChHHHHHHHHHHcCCC
Confidence            999999987788899989886  7888886543221111110 1111  4554433333333  4678888999999876

>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}

Probab=96.17  E-value=0.015  Score=53.67  Aligned_cols=133  Identities=17%  Similarity=0.200  Sum_probs=81.9

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHc-CCCeEE-EEcCChhhHHH-HHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072          197 SSVAVFGLGAVGLAAAEGARIA-GASRII-GVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  273 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~-g~~~Vi-~~~~~~~~~~~-~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~  273 (361)
                      -+|.|+|+|.+|...+..++.. +. .++ +.++++++.+. ++++|+ ..+  .+    +.+.+   .+..+|+|+.++
T Consensus         5 ~rvgiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~a~~~g~-~~~--~~----~~~~l---~~~~~D~V~i~t   73 (344)
T 3euw_A            5 LRIALFGAGRIGHVHAANIAANPDL-ELVVIADPFIEGAQRLAEANGA-EAV--AS----PDEVF---ARDDIDGIVIGS   73 (344)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHCTTE-EEEEEECSSHHHHHHHHHTTTC-EEE--SS----HHHHT---TCSCCCEEEECS
T ss_pred             eEEEEECCcHHHHHHHHHHHhCCCc-EEEEEECCCHHHHHHHHHHcCC-cee--CC----HHHHh---cCCCCCEEEEeC
Confidence            3789999999999888877766 55 555 67888888665 455773 332  11    33222   223799999999


Q ss_pred             CChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecC-hhhhc--cccEEEEeeecCCCcCCcHHHHHHHHHcCCc
Q 018072          274 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKVI  344 (361)
Q Consensus       274 g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~-~~~~~--~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l  344 (361)
                      ......+.+..++..  |+-+++..+-....-... .....  +++.+.-.+..++  ...+.++.+++++|+|
T Consensus        74 p~~~h~~~~~~al~~--gk~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~--~p~~~~~k~~i~~g~i  143 (344)
T 3euw_A           74 PTSTHVDLITRAVER--GIPALCEKPIDLDIEMVRACKEKIGDGASKVMLGFNRRF--DPSFAAINARVANQEI  143 (344)
T ss_dssp             CGGGHHHHHHHHHHT--TCCEEECSCSCSCHHHHHHHHHHHGGGGGGEEECCGGGG--CHHHHHHHHHHHTTTT
T ss_pred             CchhhHHHHHHHHHc--CCcEEEECCCCCCHHHHHHHHHHHHhcCCeEEecchhhc--CHHHHHHHHHHhcCCC
Confidence            987778888888875  565676543211111110 11111  4454433332232  4678888899998876

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=96.16  E-value=0.021  Score=51.68  Aligned_cols=94  Identities=14%  Similarity=0.079  Sum_probs=61.7

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCCC--EEEcCCCCCccHHHHHHHHcCCCccEEEE
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVT--DFVNTSEHDRPIQEVIAEMTNGGVDRSVE  271 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~-~~~G~~--~vv~~~~~~~~~~~~i~~~~~~g~Dvvid  271 (361)
                      .+.+++|+|+|++|.+++..+...|+.+|++++++.+|.+.+ ++++..  .+++       +. .+.+.. .++|+||+
T Consensus       140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~-------~~-~~~~~~-~~aDivIn  210 (297)
T 2egg_A          140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFS-------LA-EAETRL-AEYDIIIN  210 (297)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEEC-------HH-HHHHTG-GGCSEEEE
T ss_pred             CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceee-------HH-HHHhhh-ccCCEEEE
Confidence            578999999999999999999889987999999998886554 456542  2221       21 222221 26899999


Q ss_pred             ccCChHH-----HHHHHHHhcCCCcEEEEEcC
Q 018072          272 CTGNIDN-----MISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       272 ~~g~~~~-----~~~~~~~l~~~~G~iv~~g~  298 (361)
                      +++....     .......++++ ..++.+..
T Consensus       211 ~t~~~~~~~~~~~~i~~~~l~~~-~~v~D~~y  241 (297)
T 2egg_A          211 TTSVGMHPRVEVQPLSLERLRPG-VIVSDIIY  241 (297)
T ss_dssp             CSCTTCSSCCSCCSSCCTTCCTT-CEEEECCC
T ss_pred             CCCCCCCCCCCCCCCCHHHcCCC-CEEEEcCC
Confidence            9986321     00112345554 55666654

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=96.15  E-value=0.006  Score=53.36  Aligned_cols=73  Identities=12%  Similarity=0.047  Sum_probs=49.8

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEE-c--CChhhHHHHH-Hc-CCCEEEcCCCCCccHHHHHHHHcC--CCcc
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-D--RSSKRFEEAK-KF-GVTDFVNTSEHDRPIQEVIAEMTN--GGVD  267 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~-~--~~~~~~~~~~-~~-G~~~vv~~~~~~~~~~~~i~~~~~--~g~D  267 (361)
                      |.++||+|+ |++|...++.+...|+ +|+++ +  +++++++.+. ++ +. .+.+..+    +.+.+.....  +++|
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~r~~~~~~~~~~~~~~~-~~~~~~~----v~~~~~~~~~~~g~iD   74 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGY-TVVCHDASFADAAERQRFESENPGT-IALAEQK----PERLVDATLQHGEAID   74 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHSTTE-EECCCCC----GGGHHHHHGGGSSCEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCcCCHHHHHHHHHHhCCC-cccCHHH----HHHHHHHHHHHcCCCC
Confidence            467899987 8999999999888999 89999 6  8888776554 34 32 2222222    3333333322  3799


Q ss_pred             EEEEccC
Q 018072          268 RSVECTG  274 (361)
Q Consensus       268 vvid~~g  274 (361)
                      ++|+++|
T Consensus        75 ~lv~~Ag   81 (244)
T 1zmo_A           75 TIVSNDY   81 (244)
T ss_dssp             EEEECCC
T ss_pred             EEEECCC
Confidence            9999987

>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*

Probab=96.15  E-value=0.023  Score=51.55  Aligned_cols=101  Identities=15%  Similarity=0.079  Sum_probs=66.5

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcC--------CCEEEcCCCCCccHHHHHHHHcCC
Q 018072          193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG--------VTDFVNTSEHDRPIQEVIAEMTNG  264 (361)
Q Consensus       193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G--------~~~vv~~~~~~~~~~~~i~~~~~~  264 (361)
                      .+++.+||++|+|. |..+..+++..+..+|+++|.+++-.+.+++.-        ...+ .....+  ..+.+....++
T Consensus        93 ~~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v-~~~~~D--~~~~~~~~~~~  168 (304)
T 3bwc_A           93 HPKPERVLIIGGGD-GGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRA-TVRVGD--GLAFVRQTPDN  168 (304)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTE-EEEESC--HHHHHHSSCTT
T ss_pred             CCCCCeEEEEcCCC-CHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcE-EEEECc--HHHHHHhccCC
Confidence            35678999998865 666777776655559999999999888887632        1111 111122  33333322344


Q ss_pred             CccEEEEccCC----------hHHHHHHHHHhcCCCcEEEEEcC
Q 018072          265 GVDRSVECTGN----------IDNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       265 g~Dvvid~~g~----------~~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      .||+|+.....          .+.+..+.+.|+++ |++++...
T Consensus       169 ~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~~  211 (304)
T 3bwc_A          169 TYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPD-GICCNQGE  211 (304)
T ss_dssp             CEEEEEEECC---------CCHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             ceeEEEECCCCccccchhhhHHHHHHHHHHhcCCC-cEEEEecC
Confidence            89999974421          35678889999997 99988753

>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*

Probab=96.14  E-value=0.024  Score=45.98  Aligned_cols=100  Identities=18%  Similarity=0.143  Sum_probs=64.5

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHH-HcCCCccEEE
Q 018072          193 PERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAE-MTNGGVDRSV  270 (361)
Q Consensus       193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~-~~~~g~Dvvi  270 (361)
                      ++++++||-+|+|. |..+..+++..|. .+++++|.++ ..+.    .--.++..+..+....+.+.. +.++.+|+|+
T Consensus        20 ~~~~~~vLd~G~G~-G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~   93 (180)
T 1ej0_A           20 FKPGMTVVDLGAAP-GGWSQYVVTQIGGKGRIIACDLLP-MDPI----VGVDFLQGDFRDELVMKALLERVGDSKVQVVM   93 (180)
T ss_dssp             CCTTCEEEEESCTT-CHHHHHHHHHHCTTCEEEEEESSC-CCCC----TTEEEEESCTTSHHHHHHHHHHHTTCCEEEEE
T ss_pred             CCCCCeEEEeCCCC-CHHHHHHHHHhCCCCeEEEEECcc-cccc----CcEEEEEcccccchhhhhhhccCCCCceeEEE
Confidence            68899999999987 8888888888642 4999999987 4322    111222222222112222333 3334899999


Q ss_pred             Ec-----cCC------------hHHHHHHHHHhcCCCcEEEEEcCC
Q 018072          271 EC-----TGN------------IDNMISAFECVHDGWGVAVLVGVP  299 (361)
Q Consensus       271 d~-----~g~------------~~~~~~~~~~l~~~~G~iv~~g~~  299 (361)
                      ..     .+.            ...+..+.+.|+++ |.+++....
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~~  138 (180)
T 1ej0_A           94 SDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPG-GSFVVKVFQ  138 (180)
T ss_dssp             ECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEEES
T ss_pred             ECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCC-cEEEEEEec
Confidence            83     333            35678888999997 998876543

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=96.14  E-value=0.035  Score=51.12  Aligned_cols=87  Identities=17%  Similarity=0.276  Sum_probs=62.3

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      .|.+|.|+|.|.+|...++.++..|. +|++++++.++ +.+.++|+..    .  +  +.+.+.     ..|+|+.++.
T Consensus       149 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~----~--~--l~~~l~-----~aDvVil~vp  213 (334)
T 2dbq_A          149 YGKTIGIIGLGRIGQAIAKRAKGFNM-RILYYSRTRKE-EVERELNAEF----K--P--LEDLLR-----ESDFVVLAVP  213 (334)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHHCCEE----C--C--HHHHHH-----HCSEEEECCC
T ss_pred             CCCEEEEEccCHHHHHHHHHHHhCCC-EEEEECCCcch-hhHhhcCccc----C--C--HHHHHh-----hCCEEEECCC
Confidence            56799999999999999999999998 89999998877 6666666531    1  1  333332     3688888876


Q ss_pred             ChH----HH-HHHHHHhcCCCcEEEEEc
Q 018072          275 NID----NM-ISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       275 ~~~----~~-~~~~~~l~~~~G~iv~~g  297 (361)
                      ...    .+ ...++.|+++ ..++.++
T Consensus       214 ~~~~t~~~i~~~~~~~mk~~-ailIn~s  240 (334)
T 2dbq_A          214 LTRETYHLINEERLKLMKKT-AILINIA  240 (334)
T ss_dssp             CCTTTTTCBCHHHHHHSCTT-CEEEECS
T ss_pred             CChHHHHhhCHHHHhcCCCC-cEEEECC
Confidence            533    12 3456677776 7776665

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=96.14  E-value=0.026  Score=49.68  Aligned_cols=79  Identities=18%  Similarity=0.184  Sum_probs=52.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-EEcCCCCC-ccHHHHHHHHc---CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHD-RPIQEVIAEMT---NG  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-vv~~~~~~-~~~~~~i~~~~---~~  264 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++++++.+.+.    +.+... .+..+-.+ .++.+.+....   .+
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g   82 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGA-TVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQG   82 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            3678999987 9999999998888998 8999999987765442    224332 22222222 22333333331   34


Q ss_pred             CccEEEEccC
Q 018072          265 GVDRSVECTG  274 (361)
Q Consensus       265 g~Dvvid~~g  274 (361)
                      .+|++|+++|
T Consensus        83 ~id~lvnnAg   92 (260)
T 2qq5_A           83 RLDVLVNNAY   92 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CceEEEECCc
Confidence            7999999994

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=96.14  E-value=0.017  Score=51.47  Aligned_cols=80  Identities=20%  Similarity=0.319  Sum_probs=51.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhh-------HH----HHHHcCCCEE-EcCCCCC-ccHHHHHHH
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-------FE----EAKKFGVTDF-VNTSEHD-RPIQEVIAE  260 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~-------~~----~~~~~G~~~v-v~~~~~~-~~~~~~i~~  260 (361)
                      .|.++||+|+ +++|...++.+...|+ +|+.+++++++       ++    .+++.+.... +..+-.+ .++.+.+..
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   83 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGA-NVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAA   83 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHH
Confidence            4689999988 8999999998888999 89999888653       22    2233454332 2222222 123333333


Q ss_pred             HcC--CCccEEEEccCC
Q 018072          261 MTN--GGVDRSVECTGN  275 (361)
Q Consensus       261 ~~~--~g~Dvvid~~g~  275 (361)
                      ...  +++|++|+++|.
T Consensus        84 ~~~~~g~iD~lvnnAG~  100 (274)
T 3e03_A           84 TVDTFGGIDILVNNASA  100 (274)
T ss_dssp             HHHHHSCCCEEEECCCC
T ss_pred             HHHHcCCCCEEEECCCc
Confidence            322  379999999984

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=96.14  E-value=0.018  Score=51.82  Aligned_cols=80  Identities=21%  Similarity=0.283  Sum_probs=52.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCC--CeEEEEcCChhhHHHHHH-c-----CCCE-EE--cCCCCCccHHHHHHHHc
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGA--SRIIGVDRSSKRFEEAKK-F-----GVTD-FV--NTSEHDRPIQEVIAEMT  262 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~--~~Vi~~~~~~~~~~~~~~-~-----G~~~-vv--~~~~~~~~~~~~i~~~~  262 (361)
                      .|.++||+|+ +++|...++.+...|+  .+|+.+++++++++.+.+ +     +... .+  |..+. .++.+.+....
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~  110 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQA-EKIKPFIENLP  110 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCG-GGHHHHHHTSC
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCH-HHHHHHHHHHH
Confidence            3679999988 8999998876666554  389999999888766543 1     3322 22  33222 23555555443


Q ss_pred             C--CCccEEEEccCC
Q 018072          263 N--GGVDRSVECTGN  275 (361)
Q Consensus       263 ~--~g~Dvvid~~g~  275 (361)
                      .  +++|++|+++|.
T Consensus       111 ~~~g~iD~lVnnAG~  125 (287)
T 3rku_A          111 QEFKDIDILVNNAGK  125 (287)
T ss_dssp             GGGCSCCEEEECCCC
T ss_pred             HhcCCCCEEEECCCc
Confidence            3  279999999883

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=96.14  E-value=0.0098  Score=52.17  Aligned_cols=75  Identities=23%  Similarity=0.310  Sum_probs=49.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCC-ccHHHHHHHHc--CCCccEEE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD-RPIQEVIAEMT--NGGVDRSV  270 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~-~~~~~~i~~~~--~~g~Dvvi  270 (361)
                      .+.++||+|+ |++|...++.+...|+ +|++++++++.    ++.+. ..+..+-.+ .++.+.+....  -+++|++|
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~----~~~~~-~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv   79 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGA-KVTGFDQAFTQ----EQYPF-ATEVMDVADAAQVAQVCQRLLAETERLDALV   79 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCCCS----SCCSS-EEEECCTTCHHHHHHHHHHHHHHCSCCCEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCchhh----hcCCc-eEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            3678999998 9999999999989998 89999888653    22342 222222222 12333333322  13799999


Q ss_pred             EccCC
Q 018072          271 ECTGN  275 (361)
Q Consensus       271 d~~g~  275 (361)
                      +++|.
T Consensus        80 ~~Ag~   84 (250)
T 2fwm_X           80 NAAGI   84 (250)
T ss_dssp             ECCCC
T ss_pred             ECCCc
Confidence            99874

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=96.12  E-value=0.042  Score=50.01  Aligned_cols=75  Identities=19%  Similarity=0.271  Sum_probs=50.0

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC---hhhHHHHH-Hc----CCC-EEEcCCCCCccHHHHHHHHcCCC
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS---SKRFEEAK-KF----GVT-DFVNTSEHDRPIQEVIAEMTNGG  265 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~---~~~~~~~~-~~----G~~-~vv~~~~~~~~~~~~i~~~~~~g  265 (361)
                      .+.++||+|+|++|.+++..+...|+++|+++.|+   .+|.+.+. ++    +.. ..++..+.+ ...+.+.     .
T Consensus       147 ~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~-~~~~~l~-----~  220 (312)
T 3t4e_A          147 RGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQH-AFTEALA-----S  220 (312)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHH-HHHHHHH-----H
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhh-hhHhhcc-----C
Confidence            57899999999999999999999999889999999   55555442 22    322 123222210 0111221     4


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|+||++++.
T Consensus       221 ~DiIINaTp~  230 (312)
T 3t4e_A          221 ADILTNGTKV  230 (312)
T ss_dssp             CSEEEECSST
T ss_pred             ceEEEECCcC
Confidence            8999999864

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=96.12  E-value=0.012  Score=52.21  Aligned_cols=80  Identities=23%  Similarity=0.245  Sum_probs=50.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHH----HHcCCCEE-EcCCCCC-ccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEA----KKFGVTDF-VNTSEHD-RPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~-~~~~~~~~----~~~G~~~v-v~~~~~~-~~~~~~i~~~~~--~  264 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++ ++++.+.+    ++.+.... +..+-.+ ..+.+.+.+...  +
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g  105 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGA-KVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWG  105 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4678999987 9999999998888999 7877777 55554433    33454432 2222222 123333333222  3


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      ++|++|+++|.
T Consensus       106 ~id~lv~nAg~  116 (269)
T 4dmm_A          106 RLDVLVNNAGI  116 (269)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=96.10  E-value=0.025  Score=51.76  Aligned_cols=78  Identities=18%  Similarity=0.244  Sum_probs=49.9

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCC-----hhhHHHHH----HcCCCE-EEcCCCCC-ccHHHHHHHHcC
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS-----SKRFEEAK----KFGVTD-FVNTSEHD-RPIQEVIAEMTN  263 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~-----~~~~~~~~----~~G~~~-vv~~~~~~-~~~~~~i~~~~~  263 (361)
                      +.++||+|+ |++|...++.+...|+ +|+++.++     +++++.+.    +.+... .+..+-.+ ..+.+.+.....
T Consensus         5 ~k~vlVTGas~GIG~aia~~L~~~G~-~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~   83 (324)
T 3u9l_A            5 KKIILITGASSGFGRLTAEALAGAGH-RVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIG   83 (324)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            578999988 9999999999999999 88887665     34444332    334432 22222222 224444443322


Q ss_pred             --CCccEEEEccC
Q 018072          264 --GGVDRSVECTG  274 (361)
Q Consensus       264 --~g~Dvvid~~g  274 (361)
                        +++|++|+++|
T Consensus        84 ~~g~iD~lVnnAG   96 (324)
T 3u9l_A           84 EDGRIDVLIHNAG   96 (324)
T ss_dssp             HHSCCSEEEECCC
T ss_pred             HcCCCCEEEECCC
Confidence              37999999998

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=96.10  E-value=0.021  Score=50.54  Aligned_cols=79  Identities=14%  Similarity=0.275  Sum_probs=50.5

Q ss_pred             CCCEEEEEcC---CHHHHHHHHHHHHcCCCeEEEEcCChhh-HHHH-HHcCCC-EEE--cCCCCCccHHHHHHHH---cC
Q 018072          195 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSSKR-FEEA-KKFGVT-DFV--NTSEHDRPIQEVIAEM---TN  263 (361)
Q Consensus       195 ~g~~VlI~G~---g~vG~~a~~~a~~~g~~~Vi~~~~~~~~-~~~~-~~~G~~-~vv--~~~~~~~~~~~~i~~~---~~  263 (361)
                      .+.++||+|+   |++|...++.+...|+ +|+.+++++++ ++.+ ++++.. ..+  |..+. .++.+.+...   .+
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g   83 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNE-EHLASLAGRVTEAIG   83 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCH-HHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHhcCCCceEEEccCCCH-HHHHHHHHHHHHHhC
Confidence            4678999984   7999999998888998 89999988765 2433 334432 122  32222 1233333322   22


Q ss_pred             --CCccEEEEccCC
Q 018072          264 --GGVDRSVECTGN  275 (361)
Q Consensus       264 --~g~Dvvid~~g~  275 (361)
                        +++|++|+++|.
T Consensus        84 ~~~~iD~lv~nAg~   97 (269)
T 2h7i_A           84 AGNKLDGVVHSIGF   97 (269)
T ss_dssp             TTCCEEEEEECCCC
T ss_pred             CCCCceEEEECCcc
Confidence              169999999873

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=96.09  E-value=0.052  Score=48.17  Aligned_cols=90  Identities=16%  Similarity=0.161  Sum_probs=62.2

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 018072          197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  276 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~  276 (361)
                      .+|||+|+|.+|...+..+...|. +|+++++++++.+.+...++..+. .+-.+  +.       -.++|+||++++..
T Consensus         6 ~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~-~D~~d--~~-------~~~~d~vi~~a~~~   74 (286)
T 3ius_A            6 GTLLSFGHGYTARVLSRALAPQGW-RIIGTSRNPDQMEAIRASGAEPLL-WPGEE--PS-------LDGVTHLLISTAPD   74 (286)
T ss_dssp             CEEEEETCCHHHHHHHHHHGGGTC-EEEEEESCGGGHHHHHHTTEEEEE-SSSSC--CC-------CTTCCEEEECCCCB
T ss_pred             CcEEEECCcHHHHHHHHHHHHCCC-EEEEEEcChhhhhhHhhCCCeEEE-ecccc--cc-------cCCCCEEEECCCcc
Confidence            589999999999999998888898 999999999988877776654432 22222  11       23799999998742


Q ss_pred             ----HHHHHHHHHhcC----CCcEEEEEcC
Q 018072          277 ----DNMISAFECVHD----GWGVAVLVGV  298 (361)
Q Consensus       277 ----~~~~~~~~~l~~----~~G~iv~~g~  298 (361)
                          ......++.++.    - .+++.++.
T Consensus        75 ~~~~~~~~~l~~a~~~~~~~~-~~~v~~Ss  103 (286)
T 3ius_A           75 SGGDPVLAALGDQIAARAAQF-RWVGYLST  103 (286)
T ss_dssp             TTBCHHHHHHHHHHHHTGGGC-SEEEEEEE
T ss_pred             ccccHHHHHHHHHHHhhcCCc-eEEEEeec
Confidence                122333444432    2 57887764

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=96.08  E-value=0.01  Score=52.78  Aligned_cols=97  Identities=12%  Similarity=0.167  Sum_probs=59.5

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHc--CCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072          198 SVAVFGL-GAVGLAAAEGARIA--GASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       198 ~VlI~G~-g~vG~~a~~~a~~~--g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      +|||+|+ |.+|...++.+...  |. +|+++++++++.+.+...+...+ ..+-.+  . +.+..... ++|+||++++
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~-~~D~~d--~-~~~~~~~~-~~d~vi~~a~   74 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPAS-QIVAIVRNPAKAQALAAQGITVR-QADYGD--E-AALTSALQ-GVEKLLLISS   74 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGG-GEEEEESCTTTCHHHHHTTCEEE-ECCTTC--H-HHHHHHTT-TCSEEEECC-
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCc-eEEEEEcChHhhhhhhcCCCeEE-EcCCCC--H-HHHHHHHh-CCCEEEEeCC
Confidence            4899998 99999999888777  77 89999898877665555555432 222222  1 23444333 6899999987


Q ss_pred             Ch-----HHHHHHHHHhcCCC-cEEEEEcCCC
Q 018072          275 NI-----DNMISAFECVHDGW-GVAVLVGVPS  300 (361)
Q Consensus       275 ~~-----~~~~~~~~~l~~~~-G~iv~~g~~~  300 (361)
                      ..     ......++.+...+ ++++.++...
T Consensus        75 ~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~  106 (286)
T 2zcu_A           75 SEVGQRAPQHRNVINAAKAAGVKFIAYTSLLH  106 (286)
T ss_dssp             -------CHHHHHHHHHHHHTCCEEEEEEETT
T ss_pred             CCchHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence            42     12233444443321 5788887543

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=96.07  E-value=0.024  Score=50.52  Aligned_cols=91  Identities=19%  Similarity=0.196  Sum_probs=60.5

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHH-HHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEE
Q 018072          193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  271 (361)
Q Consensus       193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~-~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid  271 (361)
                      ...+.+++|+|+|+++.+++..+...|+.+|+++.|+.+|.+. +++++.+ ..   . +  .       ....+|+||+
T Consensus       116 ~~~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~-~~---~-~--~-------~~~~~DivIn  181 (271)
T 1npy_A          116 LNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYA-YI---N-S--L-------ENQQADILVN  181 (271)
T ss_dssp             CCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCE-EE---S-C--C-------TTCCCSEEEE
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc-cc---h-h--h-------hcccCCEEEE
Confidence            3457899999999999999998999998789999999887554 4556642 11   0 0  0       0126899999


Q ss_pred             ccCChHH-------HHHHHHHhcCCCcEEEEEcC
Q 018072          272 CTGNIDN-------MISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       272 ~~g~~~~-------~~~~~~~l~~~~G~iv~~g~  298 (361)
                      +++....       .......+.++ ..++.+-.
T Consensus       182 aTp~gm~~~~~~~~~~~~~~~l~~~-~~v~DlvY  214 (271)
T 1npy_A          182 VTSIGMKGGKEEMDLAFPKAFIDNA-SVAFDVVA  214 (271)
T ss_dssp             CSSTTCTTSTTTTSCSSCHHHHHHC-SEEEECCC
T ss_pred             CCCCCccCccccCCCCCCHHHcCCC-CEEEEeec
Confidence            9875321       11113456665 66666543

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=96.06  E-value=0.02  Score=50.99  Aligned_cols=80  Identities=24%  Similarity=0.268  Sum_probs=51.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcC-------------ChhhHHHH----HHcCCCEE-EcCCCCC-ccH
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-------------SSKRFEEA----KKFGVTDF-VNTSEHD-RPI  254 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~-------------~~~~~~~~----~~~G~~~v-v~~~~~~-~~~  254 (361)
                      .|.++||+|+ +++|...++.+...|+ +|+++++             ++++++.+    .+.+.... +..+-.+ ..+
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRL   88 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            4789999988 8999999999889999 8999887             44444433    33444332 2222222 123


Q ss_pred             HHHHHHHcC--CCccEEEEccCC
Q 018072          255 QEVIAEMTN--GGVDRSVECTGN  275 (361)
Q Consensus       255 ~~~i~~~~~--~g~Dvvid~~g~  275 (361)
                      .+.+.....  +++|++|+++|.
T Consensus        89 ~~~~~~~~~~~g~id~lvnnAg~  111 (277)
T 3tsc_A           89 RKVVDDGVAALGRLDIIVANAGV  111 (277)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCC
Confidence            333333222  369999999874

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=96.06  E-value=0.018  Score=52.54  Aligned_cols=80  Identities=25%  Similarity=0.306  Sum_probs=51.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCC----------hhhHHH----HHHcCCCEEEcC-CCCC-ccHHHH
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS----------SKRFEE----AKKFGVTDFVNT-SEHD-RPIQEV  257 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~----------~~~~~~----~~~~G~~~vv~~-~~~~-~~~~~~  257 (361)
                      .|.++||+|+ +++|.+.++.+...|+ +|++++++          .++.+.    +.+.|....... +-.+ .++.+.
T Consensus        26 ~gk~vlVTGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~  104 (322)
T 3qlj_A           26 DGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL  104 (322)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            5788999987 8999999998888999 99999876          333333    334454433222 2222 123333


Q ss_pred             HHHHcC--CCccEEEEccCC
Q 018072          258 IAEMTN--GGVDRSVECTGN  275 (361)
Q Consensus       258 i~~~~~--~g~Dvvid~~g~  275 (361)
                      +.....  +++|++|+++|.
T Consensus       105 ~~~~~~~~g~iD~lv~nAg~  124 (322)
T 3qlj_A          105 IQTAVETFGGLDVLVNNAGI  124 (322)
T ss_dssp             HHHHHHHHSCCCEEECCCCC
T ss_pred             HHHHHHHcCCCCEEEECCCC
Confidence            333222  379999999984

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=96.05  E-value=0.014  Score=51.97  Aligned_cols=77  Identities=22%  Similarity=0.300  Sum_probs=50.1

Q ss_pred             CCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCC-ccHHHHHHHHcC--CCccE
Q 018072          193 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD-RPIQEVIAEMTN--GGVDR  268 (361)
Q Consensus       193 ~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~-~~~~~~i~~~~~--~g~Dv  268 (361)
                      ...|.+|||+|+ +++|.+.++.+...|+ +|+++++++++..     +....+..+-.+ .++.+.+.....  +++|+
T Consensus        11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   84 (269)
T 3vtz_A           11 EFTDKVAIVTGGSSGIGLAVVDALVRYGA-KVVSVSLDEKSDV-----NVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDI   84 (269)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCC--CT-----TSSEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhcc-----CceeEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            457889999988 8999999998888999 8999988876542     122222222222 123333333322  37999


Q ss_pred             EEEccCC
Q 018072          269 SVECTGN  275 (361)
Q Consensus       269 vid~~g~  275 (361)
                      +|+++|.
T Consensus        85 lv~nAg~   91 (269)
T 3vtz_A           85 LVNNAGI   91 (269)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9999874

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=96.04  E-value=0.021  Score=51.20  Aligned_cols=69  Identities=12%  Similarity=0.165  Sum_probs=50.5

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCC---CEEEcCCCCCccHHHHHHHHcCCCccEEE
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGV---TDFVNTSEHDRPIQEVIAEMTNGGVDRSV  270 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~-~~~G~---~~vv~~~~~~~~~~~~i~~~~~~g~Dvvi  270 (361)
                      .+.+++|+|+|++|.+.+..+...|+.+|+++.++.++.+.+ ++++.   .......+           +. .++|+||
T Consensus       125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~-----------l~-~~aDiII  192 (281)
T 3o8q_A          125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQ-----------LK-QSYDVII  192 (281)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG-----------CC-SCEEEEE
T ss_pred             cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHH-----------hc-CCCCEEE
Confidence            578999999999999999888889977999999999886654 33442   12222211           11 3689999


Q ss_pred             EccCC
Q 018072          271 ECTGN  275 (361)
Q Consensus       271 d~~g~  275 (361)
                      ++++.
T Consensus       193 naTp~  197 (281)
T 3o8q_A          193 NSTSA  197 (281)
T ss_dssp             ECSCC
T ss_pred             EcCcC
Confidence            99875

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=96.04  E-value=0.021  Score=52.00  Aligned_cols=80  Identities=23%  Similarity=0.308  Sum_probs=51.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCC------------hhhHHH----HHHcCCCEEE-cCCCCC-ccHH
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS------------SKRFEE----AKKFGVTDFV-NTSEHD-RPIQ  255 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~------------~~~~~~----~~~~G~~~vv-~~~~~~-~~~~  255 (361)
                      .|.++||+|+ +++|...++.+...|+ +|++++++            +++++.    +++.|....+ ..+-.+ .++.
T Consensus        45 ~gk~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~  123 (317)
T 3oec_A           45 QGKVAFITGAARGQGRTHAVRLAQDGA-DIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQ  123 (317)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-eEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            5789999987 9999999999989999 89888765            444333    2344554322 222222 2233


Q ss_pred             HHHHHHcC--CCccEEEEccCC
Q 018072          256 EVIAEMTN--GGVDRSVECTGN  275 (361)
Q Consensus       256 ~~i~~~~~--~g~Dvvid~~g~  275 (361)
                      +.+.....  +++|++|+++|.
T Consensus       124 ~~~~~~~~~~g~iD~lVnnAg~  145 (317)
T 3oec_A          124 AVVDEALAEFGHIDILVSNVGI  145 (317)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCC
Confidence            33333322  379999999883

>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}

Probab=96.04  E-value=0.0074  Score=52.06  Aligned_cols=96  Identities=18%  Similarity=0.088  Sum_probs=68.8

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC-EEEcCCCCCccHHHHHHHHc-CCCccEEE
Q 018072          193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMT-NGGVDRSV  270 (361)
Q Consensus       193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~-~vv~~~~~~~~~~~~i~~~~-~~g~Dvvi  270 (361)
                      ++++.+||-+|+|. |..+..+++. +. +|+++|.+++.++.+++.... .++..+-.+ .+     .+. ++.||+|+
T Consensus        46 ~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~-~~-----~~~~~~~fD~v~  116 (226)
T 3m33_A           46 LTPQTRVLEAGCGH-GPDAARFGPQ-AA-RWAAYDFSPELLKLARANAPHADVYEWNGKG-EL-----PAGLGAPFGLIV  116 (226)
T ss_dssp             CCTTCEEEEESCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHCTTSEEEECCSCS-SC-----CTTCCCCEEEEE
T ss_pred             CCCCCeEEEeCCCC-CHHHHHHHHc-CC-EEEEEECCHHHHHHHHHhCCCceEEEcchhh-cc-----CCcCCCCEEEEE
Confidence            36889999999875 6677777776 66 999999999999998875322 222221111 00     012 34799999


Q ss_pred             EccCChHHHHHHHHHhcCCCcEEEEEcC
Q 018072          271 ECTGNIDNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       271 d~~g~~~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      ........+..+.+.|+++ |+++..+.
T Consensus       117 ~~~~~~~~l~~~~~~Lkpg-G~l~~~~~  143 (226)
T 3m33_A          117 SRRGPTSVILRLPELAAPD-AHFLYVGP  143 (226)
T ss_dssp             EESCCSGGGGGHHHHEEEE-EEEEEEES
T ss_pred             eCCCHHHHHHHHHHHcCCC-cEEEEeCC
Confidence            9877767889999999997 99995543

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=96.03  E-value=0.032  Score=48.31  Aligned_cols=74  Identities=20%  Similarity=0.115  Sum_probs=49.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHc--CCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIA--GASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  271 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~--g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid  271 (361)
                      .+.+|||+|+ |.+|...++.+...  |. +|+++++++++.+.+ ..+... +..+-.+   .+.+.++.. ++|+||+
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~-~V~~~~r~~~~~~~~-~~~~~~-~~~D~~d---~~~~~~~~~-~~d~vi~   75 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKF-VAKGLVRSAQGKEKI-GGEADV-FIGDITD---ADSINPAFQ-GIDALVI   75 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTC-EEEEEESCHHHHHHT-TCCTTE-EECCTTS---HHHHHHHHT-TCSEEEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCc-EEEEEEcCCCchhhc-CCCeeE-EEecCCC---HHHHHHHHc-CCCEEEE
Confidence            3678999997 99999999988888  67 899999988776543 122322 2222222   123333332 5899999


Q ss_pred             ccCC
Q 018072          272 CTGN  275 (361)
Q Consensus       272 ~~g~  275 (361)
                      +++.
T Consensus        76 ~a~~   79 (253)
T 1xq6_A           76 LTSA   79 (253)
T ss_dssp             CCCC
T ss_pred             eccc
Confidence            9873

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.02  E-value=0.038  Score=48.64  Aligned_cols=34  Identities=32%  Similarity=0.407  Sum_probs=30.6

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  229 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~  229 (361)
                      +.+|+|+|+|++|..++..+.+.|..+++.+|.+
T Consensus        28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d   61 (251)
T 1zud_1           28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD   61 (251)
T ss_dssp             TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred             cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            4689999999999999999999999899998765

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=96.02  E-value=0.037  Score=49.25  Aligned_cols=85  Identities=22%  Similarity=0.321  Sum_probs=59.0

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCE-EEcCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  276 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~-vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~  276 (361)
                      +|.|+|+|.+|...+..+...|. +|+++++++++.+.+.+.|... ...  +    .    .+.  .+.|+||.++.. 
T Consensus         2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~~~--~----~----~~~--~~~D~vi~av~~-   67 (279)
T 2f1k_A            2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQLVDEAGQ--D----L----SLL--QTAKIIFLCTPI-   67 (279)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTSCSEEES--C----G----GGG--TTCSEEEECSCH-
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhCCCCccccC--C----H----HHh--CCCCEEEEECCH-
Confidence            68899999999999988888898 8999999999998888887642 211  1    1    112  358999999986 


Q ss_pred             HHHHHHHHH----hcCCCcEEEEEc
Q 018072          277 DNMISAFEC----VHDGWGVAVLVG  297 (361)
Q Consensus       277 ~~~~~~~~~----l~~~~G~iv~~g  297 (361)
                      ......++.    ++++ ..++.++
T Consensus        68 ~~~~~~~~~l~~~~~~~-~~vv~~~   91 (279)
T 2f1k_A           68 QLILPTLEKLIPHLSPT-AIVTDVA   91 (279)
T ss_dssp             HHHHHHHHHHGGGSCTT-CEEEECC
T ss_pred             HHHHHHHHHHHhhCCCC-CEEEECC
Confidence            444444443    3343 4555543

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=96.01  E-value=0.048  Score=48.20  Aligned_cols=81  Identities=16%  Similarity=0.146  Sum_probs=49.2

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEc-CChhhHHHH----HHcCCCE-EEcCCCCC-ccHHHHHHHHcC--
Q 018072          194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD-RSSKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMTN--  263 (361)
Q Consensus       194 ~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~-~~~~~~~~~----~~~G~~~-vv~~~~~~-~~~~~~i~~~~~--  263 (361)
                      ..+.++||+|+ |++|...++.+...|+ +|++++ ++.++.+..    ++.+... .+..+-.+ .++.+.+.....  
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  101 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGM-AVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF  101 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            35678899988 9999999998888899 888887 554443332    2234332 22222222 123333333222  


Q ss_pred             CCccEEEEccCC
Q 018072          264 GGVDRSVECTGN  275 (361)
Q Consensus       264 ~g~Dvvid~~g~  275 (361)
                      +++|++|+++|.
T Consensus       102 g~id~li~nAg~  113 (269)
T 3gk3_A          102 GKVDVLINNAGI  113 (269)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            379999999873

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=96.01  E-value=0.048  Score=49.70  Aligned_cols=77  Identities=19%  Similarity=0.213  Sum_probs=48.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHH----HHH-cCCC-EEEcCCCCCccHHHHHHHHcC-CCc
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE----AKK-FGVT-DFVNTSEHDRPIQEVIAEMTN-GGV  266 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~----~~~-~G~~-~vv~~~~~~~~~~~~i~~~~~-~g~  266 (361)
                      .+.+|||+|+ |.+|...++.+...|. +|++++++.++.+.    +.+ .+.. ..+..+-.+  . +.+..+.. .++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~-~~~~~~~~~~~~   79 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGY-DVVIADNLVNSKREAIARIEKITGKTPAFHETDVSD--E-RALARIFDAHPI   79 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTC--H-HHHHHHHHHSCC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCC-cEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCC--H-HHHHHHHhccCC
Confidence            4568999997 9999999999888998 89999886543222    221 1222 223222222  1 22333222 379


Q ss_pred             cEEEEccCC
Q 018072          267 DRSVECTGN  275 (361)
Q Consensus       267 Dvvid~~g~  275 (361)
                      |+||++++.
T Consensus        80 d~vih~A~~   88 (341)
T 3enk_A           80 TAAIHFAAL   88 (341)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEECccc
Confidence            999999874

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=96.01  E-value=0.046  Score=51.71  Aligned_cols=95  Identities=16%  Similarity=0.196  Sum_probs=60.0

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCC--CeEEEEcCChhhHHHHHH-cCC-----CEEEcCCCCC-ccHHHHHHHHcCCCccE
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGA--SRIIGVDRSSKRFEEAKK-FGV-----TDFVNTSEHD-RPIQEVIAEMTNGGVDR  268 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~--~~Vi~~~~~~~~~~~~~~-~G~-----~~vv~~~~~~-~~~~~~i~~~~~~g~Dv  268 (361)
                      +|+|+|+|.+|..+++.+...|.  ..|++.+++.++.+.+.+ ++.     -..+..+-.+ .++.+.+...   ++|+
T Consensus         3 kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~---~~Dv   79 (405)
T 4ina_A            3 KVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV---KPQI   79 (405)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH---CCSE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh---CCCE
Confidence            79999999999999988877773  389999999988776543 321     1222222222 1233333322   5899


Q ss_pred             EEEccCChHHHHHHHHHhcCCCcEEEEE
Q 018072          269 SVECTGNIDNMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       269 vid~~g~~~~~~~~~~~l~~~~G~iv~~  296 (361)
                      ||++++.......+..++..+ -.++.+
T Consensus        80 Vin~ag~~~~~~v~~a~l~~g-~~vvD~  106 (405)
T 4ina_A           80 VLNIALPYQDLTIMEACLRTG-VPYLDT  106 (405)
T ss_dssp             EEECSCGGGHHHHHHHHHHHT-CCEEES
T ss_pred             EEECCCcccChHHHHHHHHhC-CCEEEe
Confidence            999998654445555566654 455544

>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}

Probab=96.00  E-value=0.05  Score=51.43  Aligned_cols=135  Identities=16%  Similarity=0.096  Sum_probs=85.7

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHc---------CCCeEEEEcCChhhHHH-HHHcCCCEEEcCCCCCccHHHHHHHHcCCCc
Q 018072          197 SSVAVFGLGAVGLAAAEGARIA---------GASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGV  266 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~---------g~~~Vi~~~~~~~~~~~-~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~  266 (361)
                      -+|.|+|+|.+|...+...+..         +++-|-+.++++++.+. ++++|...++.  +    +.+.+.   +..+
T Consensus        27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~a~~~a~~~~~~~~y~--d----~~~ll~---~~~v   97 (412)
T 4gqa_A           27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAMAERHAAKLGAEKAYG--D----WRELVN---DPQV   97 (412)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHHHHHHHHHHTCSEEES--S----HHHHHH---CTTC
T ss_pred             ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHHHHHHHHHcCCCeEEC--C----HHHHhc---CCCC
Confidence            4789999999998877666543         34234455788877655 46688876652  1    544443   2379


Q ss_pred             cEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecCh-hhh-c-cccEEEEeeecCCCcCCcHHHHHHHHHcCC
Q 018072          267 DRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INV-L-NERTLKGTFFGNYKPRTDLPSVVDMYMNKV  343 (361)
Q Consensus       267 Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~-~-~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~  343 (361)
                      |+|+.++....-.+.+..+|..  |+=|++-.+-....-.... ... . +++.+.-.+..++  ...+.++-+++++|.
T Consensus        98 D~V~I~tp~~~H~~~~~~al~a--GkhVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~--~p~~~~~k~~i~~G~  173 (412)
T 4gqa_A           98 DVVDITSPNHLHYTMAMAAIAA--GKHVYCEKPLAVNEQQAQEMAQAARRAGVKTMVAFNNIK--TPAALLAKQIIARGD  173 (412)
T ss_dssp             CEEEECSCGGGHHHHHHHHHHT--TCEEEEESCSCSSHHHHHHHHHHHHHHTCCEEEECGGGT--SHHHHHHHHHHHHTT
T ss_pred             CEEEECCCcHHHHHHHHHHHHc--CCCeEeecCCcCCHHHHHHHHHHHHHhCCeeeeccceec--CHHHHHHHHHHhcCC
Confidence            9999999987788899999986  6778886543221111111 111 1 4544432333333  467788889999888


Q ss_pred             c
Q 018072          344 I  344 (361)
Q Consensus       344 l  344 (361)
                      |
T Consensus       174 i  174 (412)
T 4gqa_A          174 I  174 (412)
T ss_dssp             T
T ss_pred             c
Confidence            7

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=95.99  E-value=0.026  Score=50.58  Aligned_cols=73  Identities=19%  Similarity=0.209  Sum_probs=53.8

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChH
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  277 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~  277 (361)
                      +|.|+|.|.+|...++.+...|. +|+++++++++.+.+.+.|+...   .  +  ..+.+.     ..|+||.++..+.
T Consensus         3 ~I~iiG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~---~--~--~~~~~~-----~advvi~~v~~~~   69 (287)
T 3pdu_A            3 TYGFLGLGIMGGPMAANLVRAGF-DVTVWNRNPAKCAPLVALGARQA---S--S--PAEVCA-----ACDITIAMLADPA   69 (287)
T ss_dssp             CEEEECCSTTHHHHHHHHHHHTC-CEEEECSSGGGGHHHHHHTCEEC---S--C--HHHHHH-----HCSEEEECCSSHH
T ss_pred             eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec---C--C--HHHHHH-----cCCEEEEEcCCHH
Confidence            68899999999998888888898 89999999999988887775321   1  1  333332     3688888888764


Q ss_pred             HHHHHH
Q 018072          278 NMISAF  283 (361)
Q Consensus       278 ~~~~~~  283 (361)
                      .+...+
T Consensus        70 ~~~~v~   75 (287)
T 3pdu_A           70 AAREVC   75 (287)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            555544

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=95.98  E-value=0.013  Score=51.63  Aligned_cols=78  Identities=22%  Similarity=0.343  Sum_probs=48.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCE-EEcCCCCC-ccHHHHHHHHc-CCCccEEE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHD-RPIQEVIAEMT-NGGVDRSV  270 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~-vv~~~~~~-~~~~~~i~~~~-~~g~Dvvi  270 (361)
                      .+.++||+|+ +++|...++.+...|+ +|++++++.++  ..++++... .+..+-.+ .++.+.+.... .+++|+++
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~--~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv   84 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGA-QVVVLDIRGED--VVADLGDRARFAAADVTDEAAVASALDLAETMGTLRIVV   84 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCHH--HHHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCchHH--HHHhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEE
Confidence            3678999988 8999999998888898 89988886543  334455433 22222222 12222222211 24799999


Q ss_pred             EccCC
Q 018072          271 ECTGN  275 (361)
Q Consensus       271 d~~g~  275 (361)
                      +++|.
T Consensus        85 ~nAg~   89 (257)
T 3tl3_A           85 NCAGT   89 (257)
T ss_dssp             ECGGG
T ss_pred             ECCCC
Confidence            99983

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=95.98  E-value=0.019  Score=52.64  Aligned_cols=41  Identities=22%  Similarity=0.160  Sum_probs=34.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEc-CChhhHHHH
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD-RSSKRFEEA  236 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~-~~~~~~~~~  236 (361)
                      .+.++||+|+ |++|...++.+...|+ +|++++ +++++.+.+
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~-~Vv~~~~r~~~~~~~~   87 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANAL   87 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHH
Confidence            4678999987 9999999999989998 899998 888776554

>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}

Probab=95.97  E-value=0.02  Score=52.19  Aligned_cols=96  Identities=16%  Similarity=0.102  Sum_probs=64.9

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHHc-CCC--EEEcCCCCCccHHHHHHHHcCCCccEEEEc
Q 018072          197 SSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKF-GVT--DFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  272 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~-g~~~Vi~~~~~~~~~~~~~~~-G~~--~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~  272 (361)
                      .+||++|+|. |.++..+++.. +. +|++++.+++-.+.+++. +..  .-+.....+  ..+.+....++.||+||..
T Consensus        91 ~rVLdIG~G~-G~la~~la~~~p~~-~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~D--a~~~l~~~~~~~fDvIi~D  166 (317)
T 3gjy_A           91 LRITHLGGGA-CTMARYFADVYPQS-RNTVVELDAELARLSREWFDIPRAPRVKIRVDD--ARMVAESFTPASRDVIIRD  166 (317)
T ss_dssp             CEEEEESCGG-GHHHHHHHHHSTTC-EEEEEESCHHHHHHHHHHSCCCCTTTEEEEESC--HHHHHHTCCTTCEEEEEEC
T ss_pred             CEEEEEECCc-CHHHHHHHHHCCCc-EEEEEECCHHHHHHHHHhccccCCCceEEEECc--HHHHHhhccCCCCCEEEEC
Confidence            4899999865 67777888865 55 899999999999999873 321  001111122  4444444434589999874


Q ss_pred             cCC----------hHHHHHHHHHhcCCCcEEEEEc
Q 018072          273 TGN----------IDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       273 ~g~----------~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      ...          .+.+..+.+.|+++ |.++..-
T Consensus       167 ~~~~~~~~~~L~t~efl~~~~r~Lkpg-Gvlv~~~  200 (317)
T 3gjy_A          167 VFAGAITPQNFTTVEFFEHCHRGLAPG-GLYVANC  200 (317)
T ss_dssp             CSTTSCCCGGGSBHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             CCCccccchhhhHHHHHHHHHHhcCCC-cEEEEEe
Confidence            321          35678899999997 9987654

>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*

Probab=95.97  E-value=0.012  Score=52.87  Aligned_cols=101  Identities=15%  Similarity=0.122  Sum_probs=65.8

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc-CC------CEEEcCCCCCccHHHHHHHHcCCC
Q 018072          193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GV------TDFVNTSEHDRPIQEVIAEMTNGG  265 (361)
Q Consensus       193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~-G~------~~vv~~~~~~~~~~~~i~~~~~~g  265 (361)
                      ..++.+||++|+|. |..+..+++..+..+|++++.+++..+.+++. ..      +.-+.....+  ..+.+... ++.
T Consensus        76 ~~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D--~~~~l~~~-~~~  151 (283)
T 2i7c_A           76 SKEPKNVLVVGGGD-GGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIED--ASKFLENV-TNT  151 (283)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESC--HHHHHHHC-CSC
T ss_pred             CCCCCeEEEEeCCc-CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECC--hHHHHHhC-CCC
Confidence            34668999998764 56666677665555999999999999988763 21      1001111122  33333332 448


Q ss_pred             ccEEEEccCC----------hHHHHHHHHHhcCCCcEEEEEcC
Q 018072          266 VDRSVECTGN----------IDNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       266 ~Dvvid~~g~----------~~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      ||+|+-....          .+.++.+.+.|+++ |.++....
T Consensus       152 fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pg-G~lv~~~~  193 (283)
T 2i7c_A          152 YDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPN-GYCVAQCE  193 (283)
T ss_dssp             EEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             ceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEECC
Confidence            9999963311          35678889999997 99987743

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=95.96  E-value=0.0049  Score=53.89  Aligned_cols=74  Identities=12%  Similarity=0.218  Sum_probs=46.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHH-----HHHcC--CCc
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVI-----AEMTN--GGV  266 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i-----~~~~~--~g~  266 (361)
                      .+.++||+|+ |++|...++.+.. |. +|+++++++++.+.+.+..-...+..+     +.+..     .....  +++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D-----~~~~~~~~~~~~~~~~~~~i   76 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-DH-IVYALGRNPEHLAALAEIEGVEPIESD-----IVKEVLEEGGVDKLKNLDHV   76 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHHTSTTEEEEECC-----HHHHHHTSSSCGGGTTCSCC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHhhcCCcceecc-----cchHHHHHHHHHHHHhcCCC
Confidence            3678999988 9999988876654 76 899999999988877664322222211     21111     11111  268


Q ss_pred             cEEEEccCC
Q 018072          267 DRSVECTGN  275 (361)
Q Consensus       267 Dvvid~~g~  275 (361)
                      |++|+++|.
T Consensus        77 d~lv~~Ag~   85 (245)
T 3e9n_A           77 DTLVHAAAV   85 (245)
T ss_dssp             SEEEECC--
T ss_pred             CEEEECCCc
Confidence            999999884

>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17

Probab=95.95  E-value=0.01  Score=53.03  Aligned_cols=96  Identities=21%  Similarity=0.143  Sum_probs=65.5

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc------CC--CE-EEcCCCCCccHHHHHHHHcCCC
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF------GV--TD-FVNTSEHDRPIQEVIAEMTNGG  265 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~------G~--~~-vv~~~~~~~~~~~~i~~~~~~g  265 (361)
                      .+.+||++|+|. |..+..+++..+..+|++++.+++-.+.+++.      +.  .. -+...  |  ..+.+.. .++.
T Consensus        75 ~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~--D--~~~~l~~-~~~~  148 (275)
T 1iy9_A           75 NPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVD--D--GFMHIAK-SENQ  148 (275)
T ss_dssp             SCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEES--C--SHHHHHT-CCSC
T ss_pred             CCCEEEEECCch-HHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEEC--c--HHHHHhh-CCCC
Confidence            568999998864 66666777766666999999999988888763      22  11 11111  1  2223332 2347


Q ss_pred             ccEEEEccCC----------hHHHHHHHHHhcCCCcEEEEEc
Q 018072          266 VDRSVECTGN----------IDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       266 ~Dvvid~~g~----------~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      ||+|+-....          .+.++.+.+.|+++ |.++...
T Consensus       149 fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pg-G~lv~~~  189 (275)
T 1iy9_A          149 YDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKED-GIFVAQT  189 (275)
T ss_dssp             EEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEE-EEEEEEC
T ss_pred             eeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEEc
Confidence            9999975532          36788999999998 9998764

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=95.94  E-value=0.024  Score=51.75  Aligned_cols=78  Identities=23%  Similarity=0.263  Sum_probs=52.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcC---------ChhhHHH----HHHcCCCEEEcCCCCCccHHHHHHH
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR---------SSKRFEE----AKKFGVTDFVNTSEHDRPIQEVIAE  260 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~---------~~~~~~~----~~~~G~~~vv~~~~~~~~~~~~i~~  260 (361)
                      .|.++||+|+ |++|...++.+...|+ +|+++++         ++++.+.    +++.+...+.|..+.+ ++.+.+..
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga-~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~-~~~~~~~~   85 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVE-AGEKLVKT   85 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGG-GHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHH-HHHHHHHH
Confidence            4678999988 9999999998888998 8888654         4454433    2334555555655433 23333333


Q ss_pred             Hc--CCCccEEEEccC
Q 018072          261 MT--NGGVDRSVECTG  274 (361)
Q Consensus       261 ~~--~~g~Dvvid~~g  274 (361)
                      ..  -+++|++|+++|
T Consensus        86 ~~~~~g~iD~lVnnAG  101 (319)
T 1gz6_A           86 ALDTFGRIDVVVNNAG  101 (319)
T ss_dssp             HHHHTSCCCEEEECCC
T ss_pred             HHHHcCCCCEEEECCC
Confidence            22  237999999987

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=95.92  E-value=0.026  Score=49.37  Aligned_cols=92  Identities=22%  Similarity=0.296  Sum_probs=57.8

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcC---CCccEEEEc
Q 018072          197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN---GGVDRSVEC  272 (361)
Q Consensus       197 ~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~---~g~Dvvid~  272 (361)
                      .++||+|+ |++|...++.+...|+ +|+++++++++.+.      .     ...|..-.+.+..+..   +++|++|++
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~------~-----~~~Dl~~~~~v~~~~~~~~~~id~lv~~   69 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDAEVIA------D-----LSTAEGRKQAIADVLAKCSKGMDGLVLC   69 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSSSEEC------C-----TTSHHHHHHHHHHHHTTCTTCCSEEEEC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhhcc------c-----cccCCCCHHHHHHHHHHhCCCCCEEEEC
Confidence            36899988 9999999998888998 89999888765321      0     1111011122333222   468999999


Q ss_pred             cCChH------------------HHHHHHHHhcCC-CcEEEEEcCCC
Q 018072          273 TGNID------------------NMISAFECVHDG-WGVAVLVGVPS  300 (361)
Q Consensus       273 ~g~~~------------------~~~~~~~~l~~~-~G~iv~~g~~~  300 (361)
                      +|...                  ..+.+++.|... .|+++.++...
T Consensus        70 Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~  116 (257)
T 1fjh_A           70 AGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVA  116 (257)
T ss_dssp             CCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGG
T ss_pred             CCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChh
Confidence            88532                  133445555432 27999987643

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=95.92  E-value=0.04  Score=48.57  Aligned_cols=80  Identities=20%  Similarity=0.250  Sum_probs=51.5

Q ss_pred             CCCEEEEEcC---CHHHHHHHHHHHHcCCCeEEEEcCCh---hhHHHHHH-cCCCEEEcCCCCC-ccHHHHHHHHcCC--
Q 018072          195 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSS---KRFEEAKK-FGVTDFVNTSEHD-RPIQEVIAEMTNG--  264 (361)
Q Consensus       195 ~g~~VlI~G~---g~vG~~a~~~a~~~g~~~Vi~~~~~~---~~~~~~~~-~G~~~vv~~~~~~-~~~~~~i~~~~~~--  264 (361)
                      .+.++||+|+   |++|...++.+...|+ +|+.+++++   +..+.+.+ .+....+..+-.+ .++.+.+......  
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP   86 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4678999975   6999999998888998 899998876   33333332 3433333322222 2244444444333  


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      ++|++|+++|.
T Consensus        87 ~iD~lv~~Ag~   97 (265)
T 1qsg_A           87 KFDGFVHSIGF   97 (265)
T ss_dssp             SEEEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=95.92  E-value=0.054  Score=45.77  Aligned_cols=98  Identities=11%  Similarity=0.015  Sum_probs=62.7

Q ss_pred             hhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc-CC----------------C-EEEcCCCC
Q 018072          189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GV----------------T-DFVNTSEH  250 (361)
Q Consensus       189 ~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~-G~----------------~-~vv~~~~~  250 (361)
                      ....+.++.+||-+|+|. |..+..+++. |. +|+++|.+++-++.+++. +.                . .++.-+-.
T Consensus        16 ~~l~~~~~~~vLD~GCG~-G~~~~~la~~-g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~   92 (203)
T 1pjz_A           16 SSLNVVPGARVLVPLCGK-SQDMSWLSGQ-GY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFF   92 (203)
T ss_dssp             HHHCCCTTCEEEETTTCC-SHHHHHHHHH-CC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCS
T ss_pred             HhcccCCCCEEEEeCCCC-cHhHHHHHHC-CC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccc
Confidence            445677899999999876 6777777776 87 999999999998888653 21                1 11111111


Q ss_pred             CccHHHHHHHHcCCCccEEEEccC----Ch----HHHHHHHHHhcCCCcEEEEE
Q 018072          251 DRPIQEVIAEMTNGGVDRSVECTG----NI----DNMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       251 ~~~~~~~i~~~~~~g~Dvvid~~g----~~----~~~~~~~~~l~~~~G~iv~~  296 (361)
                      +..+.+      .+.||+|++...    .+    ..+....+.|+++ |+++++
T Consensus        93 ~l~~~~------~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~Lkpg-G~~~l~  139 (203)
T 1pjz_A           93 ALTARD------IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQA-CSGLLI  139 (203)
T ss_dssp             SSTHHH------HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSE-EEEEEE
T ss_pred             cCCccc------CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCC-cEEEEE
Confidence            111110      036999997321    11    2466788899997 984443

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=95.91  E-value=0.034  Score=51.46  Aligned_cols=90  Identities=20%  Similarity=0.255  Sum_probs=60.1

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHH-HcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEc
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGAR-IAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  272 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~-~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~  272 (361)
                      -.|.+|.|+|.|.+|...++.++ ..|. +|+++++++++.+.+.++|+..+     .+  +.+.+.     ..|+|+.+
T Consensus       161 l~g~~vgIIG~G~IG~~vA~~l~~~~G~-~V~~~d~~~~~~~~~~~~g~~~~-----~~--l~ell~-----~aDvVil~  227 (348)
T 2w2k_A          161 PRGHVLGAVGLGAIQKEIARKAVHGLGM-KLVYYDVAPADAETEKALGAERV-----DS--LEELAR-----RSDCVSVS  227 (348)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTCC-EEEEECSSCCCHHHHHHHTCEEC-----SS--HHHHHH-----HCSEEEEC
T ss_pred             CCCCEEEEEEECHHHHHHHHHHHHhcCC-EEEEECCCCcchhhHhhcCcEEe-----CC--HHHHhc-----cCCEEEEe
Confidence            45789999999999999999999 8998 89999998877666666665321     11  322222     25777777


Q ss_pred             cCChH----HH-HHHHHHhcCCCcEEEEEc
Q 018072          273 TGNID----NM-ISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       273 ~g~~~----~~-~~~~~~l~~~~G~iv~~g  297 (361)
                      +....    .+ ...++.|+++ ..++.++
T Consensus       228 vp~~~~t~~li~~~~l~~mk~g-ailin~s  256 (348)
T 2w2k_A          228 VPYMKLTHHLIDEAFFAAMKPG-SRIVNTA  256 (348)
T ss_dssp             CCCSGGGTTCBCHHHHHHSCTT-EEEEECS
T ss_pred             CCCChHHHHHhhHHHHhcCCCC-CEEEECC
Confidence            65422    11 2455566665 5555554

>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*

Probab=95.91  E-value=0.025  Score=51.40  Aligned_cols=99  Identities=14%  Similarity=0.158  Sum_probs=64.8

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcC------C--CEEEcCCCCCccHHHHHHHHcCC
Q 018072          193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG------V--TDFVNTSEHDRPIQEVIAEMTNG  264 (361)
Q Consensus       193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G------~--~~vv~~~~~~~~~~~~i~~~~~~  264 (361)
                      ...+.+||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-      .  ..+ .....+  ..+.+.. .++
T Consensus        93 ~~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv-~v~~~D--a~~~l~~-~~~  167 (304)
T 2o07_A           93 HPNPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKL-TLHVGD--GFEFMKQ-NQD  167 (304)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTE-EEEESC--HHHHHHT-CSS
T ss_pred             CCCCCEEEEECCCc-hHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcE-EEEECc--HHHHHhh-CCC
Confidence            35668999998864 666777777655459999999999888887631      1  111 111122  3333332 234


Q ss_pred             CccEEEEccCC----------hHHHHHHHHHhcCCCcEEEEEc
Q 018072          265 GVDRSVECTGN----------IDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       265 g~Dvvid~~g~----------~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      .||+|+.....          .+.++.+.+.|+++ |.++.-.
T Consensus       168 ~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~  209 (304)
T 2o07_A          168 AFDVIITDSSDPMGPAESLFKESYYQLMKTALKED-GVLCCQG  209 (304)
T ss_dssp             CEEEEEEECC-----------CHHHHHHHHHEEEE-EEEEEEE
T ss_pred             CceEEEECCCCCCCcchhhhHHHHHHHHHhccCCC-eEEEEec
Confidence            79999954332          24678899999997 9988754

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=95.90  E-value=0.068  Score=48.40  Aligned_cols=91  Identities=15%  Similarity=0.107  Sum_probs=64.8

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  275 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~  275 (361)
                      ..+|.|+|.|.+|...++.+...|. +|+++++++++.+.+.+.|+..   .  .+  ..+.+.     ..|+||.++..
T Consensus         9 ~~~IgiIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~---~--~~--~~e~~~-----~aDvVi~~vp~   75 (306)
T 3l6d_A            9 EFDVSVIGLGAMGTIMAQVLLKQGK-RVAIWNRSPGKAAALVAAGAHL---C--ES--VKAALS-----ASPATIFVLLD   75 (306)
T ss_dssp             SCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHTCEE---C--SS--HHHHHH-----HSSEEEECCSS
T ss_pred             CCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCee---c--CC--HHHHHh-----cCCEEEEEeCC
Confidence            4579999999999999998888898 8999999999999888877632   1  11  333332     36999999988


Q ss_pred             hHHHHHHH-----HHhcCCCcEEEEEcCCC
Q 018072          276 IDNMISAF-----ECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       276 ~~~~~~~~-----~~l~~~~G~iv~~g~~~  300 (361)
                      +..++..+     ..+.++ ..++.++...
T Consensus        76 ~~~~~~v~~~~~l~~~~~g-~ivid~st~~  104 (306)
T 3l6d_A           76 NHATHEVLGMPGVARALAH-RTIVDYTTNA  104 (306)
T ss_dssp             HHHHHHHHTSTTHHHHTTT-CEEEECCCCC
T ss_pred             HHHHHHHhcccchhhccCC-CEEEECCCCC
Confidence            65455433     334554 5666665433

>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41

Probab=95.89  E-value=0.034  Score=48.76  Aligned_cols=100  Identities=17%  Similarity=0.259  Sum_probs=67.4

Q ss_pred             hhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc----CCCE--EEcCCCCCccHHHHHHH
Q 018072          187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTD--FVNTSEHDRPIQEVIAE  260 (361)
Q Consensus       187 ~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~----G~~~--vv~~~~~~~~~~~~i~~  260 (361)
                      +.+...++++.+||-+|+| .|..+..+++.. . +|+++|.+++.++.+++.    |...  ++..+..+  +     .
T Consensus        29 l~~~l~~~~~~~vLDiGcG-~G~~~~~l~~~~-~-~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~--l-----~   98 (260)
T 1vl5_A           29 LMQIAALKGNEEVLDVATG-GGHVANAFAPFV-K-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQ--M-----P   98 (260)
T ss_dssp             HHHHHTCCSCCEEEEETCT-TCHHHHHHGGGS-S-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-C--C-----C
T ss_pred             HHHHhCCCCCCEEEEEeCC-CCHHHHHHHHhC-C-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHh--C-----C
Confidence            3455667899999999997 477777777654 4 999999999988887653    4321  22111111  0     0


Q ss_pred             HcCCCccEEEEccCC------hHHHHHHHHHhcCCCcEEEEEc
Q 018072          261 MTNGGVDRSVECTGN------IDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       261 ~~~~g~Dvvid~~g~------~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      +.++.||+|+....-      ...+..+.+.|+++ |++++..
T Consensus        99 ~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~l~~~~  140 (260)
T 1vl5_A           99 FTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKG-GQLLLVD  140 (260)
T ss_dssp             SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             CCCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCC-CEEEEEE
Confidence            223479999976331      35678899999997 9998763

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=95.89  E-value=0.015  Score=54.25  Aligned_cols=91  Identities=16%  Similarity=0.188  Sum_probs=60.7

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      .|.+|.|+|.|.+|...++.++..|.++|++.+++..+.+.+.++|+..+     .+  +.+.+.     ..|+|+.++.
T Consensus       163 ~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~-----~~--l~ell~-----~aDvV~l~~P  230 (364)
T 2j6i_A          163 EGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRV-----EN--IEELVA-----QADIVTVNAP  230 (364)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEEC-----SS--HHHHHH-----TCSEEEECCC
T ss_pred             CCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEec-----CC--HHHHHh-----cCCEEEECCC
Confidence            67899999999999999999999998339999988766666667775321     11  322221     3577777765


Q ss_pred             ChH----HH-HHHHHHhcCCCcEEEEEcC
Q 018072          275 NID----NM-ISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       275 ~~~----~~-~~~~~~l~~~~G~iv~~g~  298 (361)
                      ...    .+ ...++.|+++ +.++.++.
T Consensus       231 ~t~~t~~li~~~~l~~mk~g-a~lIn~ar  258 (364)
T 2j6i_A          231 LHAGTKGLINKELLSKFKKG-AWLVNTAR  258 (364)
T ss_dssp             CSTTTTTCBCHHHHTTSCTT-EEEEECSC
T ss_pred             CChHHHHHhCHHHHhhCCCC-CEEEECCC
Confidence            421    12 2445666665 66666643

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=95.88  E-value=0.06  Score=47.93  Aligned_cols=90  Identities=19%  Similarity=0.196  Sum_probs=61.4

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHHcCCCE-EEcCCCCCccHHHHHHHHcCC-CccEEEEccC
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKFGVTD-FVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG  274 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~~G~~~-vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g  274 (361)
                      +|.|+|+|.+|...++.++..|. .+|+++++++++.+.++++|... ..  .+    ..+.+     . +.|+||.++.
T Consensus         3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~--~~----~~~~~-----~~~aDvVilavp   71 (281)
T 2g5c_A            3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGT--TS----IAKVE-----DFSPDFVMLSSP   71 (281)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEE--SC----GGGGG-----GTCCSEEEECSC
T ss_pred             EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCccccc--CC----HHHHh-----cCCCCEEEEcCC
Confidence            68999999999999998888875 37999999999999888888742 11  11    11111     2 5799999998


Q ss_pred             ChHHH---HHHHHHhcCCCcEEEEEcCC
Q 018072          275 NIDNM---ISAFECVHDGWGVAVLVGVP  299 (361)
Q Consensus       275 ~~~~~---~~~~~~l~~~~G~iv~~g~~  299 (361)
                      .....   ......++++ ..++.++..
T Consensus        72 ~~~~~~v~~~l~~~l~~~-~iv~~~~~~   98 (281)
T 2g5c_A           72 VRTFREIAKKLSYILSED-ATVTDQGSV   98 (281)
T ss_dssp             HHHHHHHHHHHHHHSCTT-CEEEECCSC
T ss_pred             HHHHHHHHHHHHhhCCCC-cEEEECCCC
Confidence            74332   2233345665 666665543

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=95.88  E-value=0.05  Score=50.03  Aligned_cols=76  Identities=14%  Similarity=0.027  Sum_probs=48.1

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-Hc--CC-CEEEcCCCCCccHHHHHHHHcCC-CccEE
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF--GV-TDFVNTSEHDRPIQEVIAEMTNG-GVDRS  269 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~--G~-~~vv~~~~~~~~~~~~i~~~~~~-g~Dvv  269 (361)
                      +.+|||+|+ |.+|...++.+...|. +|+++++++++.+.+. .+  +. -..+..+-.+  . +.+..+..+ ++|+|
T Consensus         9 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~-~~~~~~~~~~~~d~v   84 (357)
T 1rkx_A            9 GKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLTAPTVPSLFETARVADGMQSEIGDIRD--Q-NKLLESIREFQPEIV   84 (357)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTC--H-HHHHHHHHHHCCSEE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCC-eEEEEeCCCcccchhhHhhccCCceEEEEccccC--H-HHHHHHHHhcCCCEE
Confidence            568999998 9999999998888898 8999988765433222 11  11 1223222222  1 122232222 58999


Q ss_pred             EEccCC
Q 018072          270 VECTGN  275 (361)
Q Consensus       270 id~~g~  275 (361)
                      |++++.
T Consensus        85 ih~A~~   90 (357)
T 1rkx_A           85 FHMAAQ   90 (357)
T ss_dssp             EECCSC
T ss_pred             EECCCC
Confidence            999983

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=95.88  E-value=0.023  Score=52.39  Aligned_cols=89  Identities=22%  Similarity=0.276  Sum_probs=63.9

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  273 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~  273 (361)
                      -.|.+|.|+|.|.+|...++.++..|. +|++++++.++ +.+.++|+..    .  +  +.+.+     ...|+|+.++
T Consensus       163 l~g~tvgIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~----~--~--l~ell-----~~aDvV~l~~  227 (335)
T 2g76_A          163 LNGKTLGILGLGRIGREVATRMQSFGM-KTIGYDPIISP-EVSASFGVQQ----L--P--LEEIW-----PLCDFITVHT  227 (335)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSSCH-HHHHHTTCEE----C--C--HHHHG-----GGCSEEEECC
T ss_pred             CCcCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCCcch-hhhhhcCcee----C--C--HHHHH-----hcCCEEEEec
Confidence            357899999999999999999999998 89999988766 4566777642    1  1  32222     1468888887


Q ss_pred             CChH----HH-HHHHHHhcCCCcEEEEEcC
Q 018072          274 GNID----NM-ISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       274 g~~~----~~-~~~~~~l~~~~G~iv~~g~  298 (361)
                      ....    .+ ...++.|+++ +.++.++.
T Consensus       228 P~t~~t~~li~~~~l~~mk~g-ailIN~ar  256 (335)
T 2g76_A          228 PLLPSTTGLLNDNTFAQCKKG-VRVVNCAR  256 (335)
T ss_dssp             CCCTTTTTSBCHHHHTTSCTT-EEEEECSC
T ss_pred             CCCHHHHHhhCHHHHhhCCCC-cEEEECCC
Confidence            6532    12 3566778886 77777765

>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}

Probab=95.87  E-value=0.032  Score=53.59  Aligned_cols=102  Identities=21%  Similarity=0.254  Sum_probs=66.6

Q ss_pred             hcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcCC
Q 018072          190 VAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNG  264 (361)
Q Consensus       190 ~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g-~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~~  264 (361)
                      ...+++|++||=+|+|+ |..++++|..++ ...|+++|.++++++.+++    +|...+.... .+  ..+ +....++
T Consensus       100 ~L~~~~g~~VLDlcaGp-Ggkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~-~D--a~~-l~~~~~~  174 (456)
T 3m4x_A          100 AAAAKPGEKVLDLCAAP-GGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTN-HA--PAE-LVPHFSG  174 (456)
T ss_dssp             HHCCCTTCEEEESSCTT-CHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEEC-CC--HHH-HHHHHTT
T ss_pred             HcCCCCCCEEEEECCCc-CHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEe-CC--HHH-hhhhccc
Confidence            34678999998888765 555666666543 3489999999999888754    6776432222 22  222 2222245


Q ss_pred             CccEEEE---ccCCh-------------------------HHHHHHHHHhcCCCcEEEEEc
Q 018072          265 GVDRSVE---CTGNI-------------------------DNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       265 g~Dvvid---~~g~~-------------------------~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      .||+|+-   |+|..                         ..+..+++.|+++ |+++...
T Consensus       175 ~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG-G~LvYsT  234 (456)
T 3m4x_A          175 FFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNK-GQLIYST  234 (456)
T ss_dssp             CEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             cCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEE
Confidence            7999986   33321                         4577888899997 9988653

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=95.86  E-value=0.067  Score=48.54  Aligned_cols=87  Identities=15%  Similarity=0.208  Sum_probs=61.4

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 018072          197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  276 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~  276 (361)
                      .+|.|+|+|.+|...+..+...|. +|+++++++++.+.+.+.|...   ..  +  ..+.+.     ..|+||.++..+
T Consensus        31 ~~I~iIG~G~mG~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~~--~--~~~~~~-----~~DvVi~av~~~   97 (316)
T 2uyy_A           31 KKIGFLGLGLMGSGIVSNLLKMGH-TVTVWNRTAEKCDLFIQEGARL---GR--T--PAEVVS-----TCDITFACVSDP   97 (316)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSSGGGGHHHHHTTCEE---CS--C--HHHHHH-----HCSEEEECCSSH
T ss_pred             CeEEEEcccHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHcCCEE---cC--C--HHHHHh-----cCCEEEEeCCCH
Confidence            579999999999998888888888 7999999999888887777531   11  1  333322     379999999865


Q ss_pred             HHHHHHHH-------HhcCCCcEEEEEc
Q 018072          277 DNMISAFE-------CVHDGWGVAVLVG  297 (361)
Q Consensus       277 ~~~~~~~~-------~l~~~~G~iv~~g  297 (361)
                      ..+...+.       .+.++ ..++.++
T Consensus        98 ~~~~~v~~~~~~~~~~l~~~-~~vv~~s  124 (316)
T 2uyy_A           98 KAAKDLVLGPSGVLQGIRPG-KCYVDMS  124 (316)
T ss_dssp             HHHHHHHHSTTCGGGGCCTT-CEEEECS
T ss_pred             HHHHHHHcCchhHhhcCCCC-CEEEECC
Confidence            66665553       24444 5555554

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=95.85  E-value=0.025  Score=52.37  Aligned_cols=89  Identities=18%  Similarity=0.188  Sum_probs=62.4

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      .|.+|.|+|.|.+|...++.++..|. +|++.++++.+.+.+.+.|+..+     .+  +.+.+     ...|+|+-++.
T Consensus       163 ~gktvGIIG~G~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-----~~--l~ell-----~~aDvV~l~~P  229 (351)
T 3jtm_A          163 EGKTIGTVGAGRIGKLLLQRLKPFGC-NLLYHDRLQMAPELEKETGAKFV-----ED--LNEML-----PKCDVIVINMP  229 (351)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGCC-EEEEECSSCCCHHHHHHHCCEEC-----SC--HHHHG-----GGCSEEEECSC
T ss_pred             cCCEEeEEEeCHHHHHHHHHHHHCCC-EEEEeCCCccCHHHHHhCCCeEc-----CC--HHHHH-----hcCCEEEECCC
Confidence            57899999999999999999999999 89999998777777777776421     11  22222     13677777765


Q ss_pred             Ch-HH---H-HHHHHHhcCCCcEEEEEc
Q 018072          275 NI-DN---M-ISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       275 ~~-~~---~-~~~~~~l~~~~G~iv~~g  297 (361)
                      .. ++   + ...++.|+++ ..++.++
T Consensus       230 lt~~t~~li~~~~l~~mk~g-ailIN~a  256 (351)
T 3jtm_A          230 LTEKTRGMFNKELIGKLKKG-VLIVNNA  256 (351)
T ss_dssp             CCTTTTTCBSHHHHHHSCTT-EEEEECS
T ss_pred             CCHHHHHhhcHHHHhcCCCC-CEEEECc
Confidence            31 11   1 4556677775 6676665

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=95.84  E-value=0.04  Score=49.76  Aligned_cols=73  Identities=14%  Similarity=0.167  Sum_probs=46.6

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcC-CCccEEEE
Q 018072          194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN-GGVDRSVE  271 (361)
Q Consensus       194 ~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~-~g~Dvvid  271 (361)
                      ++..+|||+|+ |.+|...++.+...|. +|+++++++++ +.   +++. .+..+-.+   .+.+..+.. +++|+||+
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~-~~---l~~~-~~~~Dl~d---~~~~~~~~~~~~~d~vih   80 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQNV-EVFGTSRNNEA-KL---PNVE-MISLDIMD---SQRVKKVISDIKPDYIFH   80 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCTTC-CC---TTEE-EEECCTTC---HHHHHHHHHHHCCSEEEE
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCCC-EEEEEecCCcc-cc---ceee-EEECCCCC---HHHHHHHHHhcCCCEEEE
Confidence            55678999988 9999999998888898 89999888765 21   2322 22222222   122332222 25899999


Q ss_pred             ccCC
Q 018072          272 CTGN  275 (361)
Q Consensus       272 ~~g~  275 (361)
                      +++.
T Consensus        81 ~A~~   84 (321)
T 2pk3_A           81 LAAK   84 (321)
T ss_dssp             CCSC
T ss_pred             cCcc
Confidence            9874

>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5

Probab=95.84  E-value=0.079  Score=48.70  Aligned_cols=136  Identities=17%  Similarity=0.078  Sum_probs=83.2

Q ss_pred             CCEEEEEcCC-HHHHHHHHHHHHc--CCCeEEEEcCChhhHHH-HHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEE
Q 018072          196 GSSVAVFGLG-AVGLAAAEGARIA--GASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  271 (361)
Q Consensus       196 g~~VlI~G~g-~vG~~a~~~a~~~--g~~~Vi~~~~~~~~~~~-~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid  271 (361)
                      --+|.|+|+| .+|...+..++..  +.+-+.+.++++++.+. ++++|...++.  +    +.+.+.   +..+|+|+.
T Consensus        18 ~irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~~~~~~~~~--~----~~~ll~---~~~vD~V~i   88 (340)
T 1zh8_A           18 KIRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFD--S----YEELLE---SGLVDAVDL   88 (340)
T ss_dssp             CEEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEES--C----HHHHHH---SSCCSEEEE
T ss_pred             ceeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHHHHHHHHhCCCcccC--C----HHHHhc---CCCCCEEEE
Confidence            3478999999 8898777766665  45334566888887665 45678644432  1    444432   236999999


Q ss_pred             ccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecC-hhhhc--cccEEEEeeecCCCcCCcHHHHHHHHHcCCc
Q 018072          272 CTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKVI  344 (361)
Q Consensus       272 ~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~-~~~~~--~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l  344 (361)
                      ++....-.+.+..+|..  |+=|++..+-....-... .....  +++.+.-.+..++  ...+.++.+++++|+|
T Consensus        89 ~tp~~~H~~~~~~al~a--GkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~R~--~p~~~~~k~~i~~g~i  160 (340)
T 1zh8_A           89 TLPVELNLPFIEKALRK--GVHVICEKPISTDVETGKKVVELSEKSEKTVYIAENFRH--VPAFWKAKELVESGAI  160 (340)
T ss_dssp             CCCGGGHHHHHHHHHHT--TCEEEEESSSSSSHHHHHHHHHHHHHCSSCEEEECGGGG--CHHHHHHHHHHHTTTT
T ss_pred             eCCchHHHHHHHHHHHC--CCcEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEecccC--CHHHHHHHHHHhcCCC
Confidence            99887778888888886  677777543211111110 01111  4554433332232  4677888899988876

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=95.84  E-value=0.038  Score=49.27  Aligned_cols=80  Identities=18%  Similarity=0.280  Sum_probs=52.2

Q ss_pred             CCCEEEEEcC-C--HHHHHHHHHHHHcCCCeEEEEcCCh--hhHHHHHH-cCCCEEEcCCCCC-ccHHHHHHHHcC--CC
Q 018072          195 RGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSS--KRFEEAKK-FGVTDFVNTSEHD-RPIQEVIAEMTN--GG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g--~vG~~a~~~a~~~g~~~Vi~~~~~~--~~~~~~~~-~G~~~vv~~~~~~-~~~~~~i~~~~~--~g  265 (361)
                      .+.++||+|+ |  ++|...++.+...|+ +|+.+++++  ++++.+.+ .+-...+..+-.+ .++.+.+.....  +.
T Consensus        25 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  103 (280)
T 3nrc_A           25 AGKKILITGLLSNKSIAYGIAKAMHREGA-ELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDG  103 (280)
T ss_dssp             TTCEEEECCCCSTTCHHHHHHHHHHHTTC-EEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSS
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHcCC-EEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            4689999985 4  499999998888999 899998887  55555544 3333333333222 223333333321  37


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++|+++|.
T Consensus       104 id~li~nAg~  113 (280)
T 3nrc_A          104 LDAIVHSIAF  113 (280)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            9999999874

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=95.83  E-value=0.036  Score=52.44  Aligned_cols=84  Identities=25%  Similarity=0.232  Sum_probs=53.7

Q ss_pred             cCC-CCCCEEEEEcC-CHHHHHHHHHHHH-cCCCeEEEEcCChhh----------------HHHHHHcCCCEE-EcCCCC
Q 018072          191 AKP-ERGSSVAVFGL-GAVGLAAAEGARI-AGASRIIGVDRSSKR----------------FEEAKKFGVTDF-VNTSEH  250 (361)
Q Consensus       191 ~~~-~~g~~VlI~G~-g~vG~~a~~~a~~-~g~~~Vi~~~~~~~~----------------~~~~~~~G~~~v-v~~~~~  250 (361)
                      ..+ +.+.++||+|+ +++|++.+..+.. .|+ +|++++++.+.                .+.+++.|.... +.-+-.
T Consensus        55 ~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA-~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvt  133 (422)
T 3s8m_A           55 GVRNDGPKKVLVIGASSGYGLASRITAAFGFGA-DTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAF  133 (422)
T ss_dssp             CCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred             cccccCCCEEEEECCChHHHHHHHHHHHHhCCC-EEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCC
Confidence            445 45788899988 8999998887777 899 88888776542                144566676432 322222


Q ss_pred             Cc-cHH---HHHHHHcCCCccEEEEccCC
Q 018072          251 DR-PIQ---EVIAEMTNGGVDRSVECTGN  275 (361)
Q Consensus       251 ~~-~~~---~~i~~~~~~g~Dvvid~~g~  275 (361)
                      +. ...   +.+.+..++++|++++++|.
T Consensus       134 d~~~v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          134 SDAARAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             SHHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence            21 222   23333332579999999875

>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*

Probab=95.83  E-value=0.017  Score=50.82  Aligned_cols=100  Identities=16%  Similarity=0.104  Sum_probs=64.9

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHH-HcCCCcc
Q 018072          193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAE-MTNGGVD  267 (361)
Q Consensus       193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~-~~~~g~D  267 (361)
                      ..++.+||=+|+|. |..++.+|...+..+|+++|.++++++.+++    +|...+ .....+  ..+.... ...+.||
T Consensus        78 ~~~~~~vLDiG~G~-G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v-~~~~~d--~~~~~~~~~~~~~fD  153 (249)
T 3g89_A           78 WQGPLRVLDLGTGA-GFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGA-RALWGR--AEVLAREAGHREAYA  153 (249)
T ss_dssp             CCSSCEEEEETCTT-TTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSE-EEEECC--HHHHTTSTTTTTCEE
T ss_pred             cCCCCEEEEEcCCC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCce-EEEECc--HHHhhcccccCCCce
Confidence            46788999998864 6666677777644499999999999888754    566432 222222  2211110 1124799


Q ss_pred             EEEEccCC--hHHHHHHHHHhcCCCcEEEEEc
Q 018072          268 RSVECTGN--IDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       268 vvid~~g~--~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      +|+...-.  +..++.+.+.|+++ |+++.+-
T Consensus       154 ~I~s~a~~~~~~ll~~~~~~Lkpg-G~l~~~~  184 (249)
T 3g89_A          154 RAVARAVAPLCVLSELLLPFLEVG-GAAVAMK  184 (249)
T ss_dssp             EEEEESSCCHHHHHHHHGGGEEEE-EEEEEEE
T ss_pred             EEEECCcCCHHHHHHHHHHHcCCC-eEEEEEe
Confidence            99975332  34567778899997 9988753

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=95.83  E-value=0.012  Score=50.96  Aligned_cols=100  Identities=18%  Similarity=0.193  Sum_probs=58.7

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCC-eEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  273 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~-~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~  273 (361)
                      +.+|||+|+ |.+|...++.+...|.. +|+++++++++.+....-++. .+..+-.+   .+.+..... ++|++|+++
T Consensus        18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~-~~~~D~~d---~~~~~~~~~-~~d~vi~~a   92 (242)
T 2bka_A           18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVN-QEVVDFEK---LDDYASAFQ-GHDVGFCCL   92 (242)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCE-EEECCGGG---GGGGGGGGS-SCSEEEECC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCce-EEecCcCC---HHHHHHHhc-CCCEEEECC
Confidence            578999997 99999999888888863 788888887654322111222 22111111   012222222 689999999


Q ss_pred             CChHH--------------HHHHHHHhcCC-CcEEEEEcCCC
Q 018072          274 GNIDN--------------MISAFECVHDG-WGVAVLVGVPS  300 (361)
Q Consensus       274 g~~~~--------------~~~~~~~l~~~-~G~iv~~g~~~  300 (361)
                      |....              ....++.+... .++++.++...
T Consensus        93 g~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~  134 (242)
T 2bka_A           93 GTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKG  134 (242)
T ss_dssp             CCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred             CcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCc
Confidence            85321              12333344332 16899887654

>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38

Probab=95.82  E-value=0.045  Score=49.89  Aligned_cols=103  Identities=22%  Similarity=0.315  Sum_probs=67.6

Q ss_pred             hhcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcC
Q 018072          189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN  263 (361)
Q Consensus       189 ~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g-~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~  263 (361)
                      ....+++|++||=+|+|+ |..+++++...+ ..+|+++|.++++++.+++    +|...+.........+.    . ..
T Consensus       112 ~~l~~~~g~~VLDlg~G~-G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~----~-~~  185 (315)
T 1ixk_A          112 VALDPKPGEIVADMAAAP-GGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIG----E-LN  185 (315)
T ss_dssp             HHHCCCTTCEEEECCSSC-SHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGG----G-GC
T ss_pred             HHhCCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcc----c-cc
Confidence            345678999999998875 667777887763 3489999999999888755    46643211111111111    1 23


Q ss_pred             CCccEEEE---ccCC-------------------------hHHHHHHHHHhcCCCcEEEEEcC
Q 018072          264 GGVDRSVE---CTGN-------------------------IDNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       264 ~g~Dvvid---~~g~-------------------------~~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      +.||+|+-   |+|.                         ...+..+.+.|+++ |+++....
T Consensus       186 ~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpG-G~lv~stc  247 (315)
T 1ixk_A          186 VEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPG-GILVYSTC  247 (315)
T ss_dssp             CCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEEES
T ss_pred             ccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCC-CEEEEEeC
Confidence            47999986   2221                         25677889999997 99987644

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=95.82  E-value=0.032  Score=51.74  Aligned_cols=88  Identities=17%  Similarity=0.214  Sum_probs=62.6

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      .|.+|.|+|.|.+|...++.++..|. +|++.+++. +.+.+.+.|+..+     .+  +.+.+.     ..|+|+-++.
T Consensus       159 ~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~~~~~g~~~~-----~~--l~ell~-----~aDiV~l~~P  224 (352)
T 3gg9_A          159 KGQTLGIFGYGKIGQLVAGYGRAFGM-NVLVWGREN-SKERARADGFAVA-----ES--KDALFE-----QSDVLSVHLR  224 (352)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSHH-HHHHHHHTTCEEC-----SS--HHHHHH-----HCSEEEECCC
T ss_pred             CCCEEEEEeECHHHHHHHHHHHhCCC-EEEEECCCC-CHHHHHhcCceEe-----CC--HHHHHh-----hCCEEEEecc
Confidence            47899999999999999999999999 999998875 3455566776421     11  333332     3688888775


Q ss_pred             ChH-H----HHHHHHHhcCCCcEEEEEc
Q 018072          275 NID-N----MISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       275 ~~~-~----~~~~~~~l~~~~G~iv~~g  297 (361)
                      ... +    -...++.|+++ ..++.++
T Consensus       225 lt~~t~~li~~~~l~~mk~g-ailIN~a  251 (352)
T 3gg9_A          225 LNDETRSIITVADLTRMKPT-ALFVNTS  251 (352)
T ss_dssp             CSTTTTTCBCHHHHTTSCTT-CEEEECS
T ss_pred             CcHHHHHhhCHHHHhhCCCC-cEEEECC
Confidence            322 1    13566778886 8888876

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=95.81  E-value=0.028  Score=49.58  Aligned_cols=82  Identities=17%  Similarity=0.227  Sum_probs=52.7

Q ss_pred             CCCCCEEEEEcC---CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCEEEcCCCCC-ccHHHHHHHHcC-
Q 018072          193 PERGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHD-RPIQEVIAEMTN-  263 (361)
Q Consensus       193 ~~~g~~VlI~G~---g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~vv~~~~~~-~~~~~~i~~~~~-  263 (361)
                      ..++.+|||+|+   +++|...++.+...|+ +|+.++++++..+.++    +.+....+..+-.+ .++.+.+..... 
T Consensus        11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   89 (271)
T 3ek2_A           11 FLDGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTH   89 (271)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHH
Confidence            456889999974   6999999998888999 8999988765444333    34433333333222 223333333321 


Q ss_pred             -CCccEEEEccCC
Q 018072          264 -GGVDRSVECTGN  275 (361)
Q Consensus       264 -~g~Dvvid~~g~  275 (361)
                       +++|++|+++|.
T Consensus        90 ~g~id~lv~nAg~  102 (271)
T 3ek2_A           90 WDSLDGLVHSIGF  102 (271)
T ss_dssp             CSCEEEEEECCCC
T ss_pred             cCCCCEEEECCcc
Confidence             379999999873

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=95.80  E-value=0.032  Score=51.24  Aligned_cols=88  Identities=23%  Similarity=0.217  Sum_probs=59.1

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      .|.+|.|+|.|.+|...++.++..|. +|++++++.++.+.+.++|....      +  +.+.+.     ..|+|+.++.
T Consensus       154 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~------~--l~e~l~-----~aDvVi~~vp  219 (330)
T 2gcg_A          154 TQSTVGIIGLGRIGQAIARRLKPFGV-QRFLYTGRQPRPEEAAEFQAEFV------S--TPELAA-----QSDFIVVACS  219 (330)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-CEEEEESSSCCHHHHHTTTCEEC------C--HHHHHH-----HCSEEEECCC
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcchhHHHhcCceeC------C--HHHHHh-----hCCEEEEeCC
Confidence            47799999999999999999999998 89999988776666666654321      1  322222     3577777775


Q ss_pred             ChH----HH-HHHHHHhcCCCcEEEEEc
Q 018072          275 NID----NM-ISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       275 ~~~----~~-~~~~~~l~~~~G~iv~~g  297 (361)
                      ...    .+ ...++.|+++ ..++.++
T Consensus       220 ~~~~t~~~i~~~~~~~mk~g-ailIn~s  246 (330)
T 2gcg_A          220 LTPATEGLCNKDFFQKMKET-AVFINIS  246 (330)
T ss_dssp             CCTTTTTCBSHHHHHHSCTT-CEEEECS
T ss_pred             CChHHHHhhCHHHHhcCCCC-cEEEECC
Confidence            421    12 3445666665 5665554

>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*

Probab=95.80  E-value=0.024  Score=51.19  Aligned_cols=98  Identities=13%  Similarity=0.112  Sum_probs=63.3

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcC--------CCEEEcCCCCCccHHHHHHHHcCCC
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG--------VTDFVNTSEHDRPIQEVIAEMTNGG  265 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G--------~~~vv~~~~~~~~~~~~i~~~~~~g  265 (361)
                      ..+.+||++|+|. |..+..+++..+..+|+++|.+++..+.+++.-        ...+ .....|  ..+.+.. .++.
T Consensus        89 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v-~~~~~D--~~~~l~~-~~~~  163 (296)
T 1inl_A           89 PNPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRA-EIVIAN--GAEYVRK-FKNE  163 (296)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTE-EEEESC--HHHHGGG-CSSC
T ss_pred             CCCCEEEEEcCCc-CHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCce-EEEECc--HHHHHhh-CCCC
Confidence            3458999998865 666677777656569999999999888887631        1111 111112  3222221 2347


Q ss_pred             ccEEEEccCC-----------hHHHHHHHHHhcCCCcEEEEEc
Q 018072          266 VDRSVECTGN-----------IDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       266 ~Dvvid~~g~-----------~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      ||+|+-....           .+.+..+.+.|+++ |.++...
T Consensus       164 fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~  205 (296)
T 1inl_A          164 FDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKED-GVFSAET  205 (296)
T ss_dssp             EEEEEEEC----------CCSHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             ceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCC-cEEEEEc
Confidence            9999954322           35678889999997 9998864

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=95.79  E-value=0.026  Score=52.06  Aligned_cols=77  Identities=19%  Similarity=0.220  Sum_probs=52.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHH-cCCC--EEEcCCCCCccHHHHHHHHcCCCccEE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKK-FGVT--DFVNTSEHDRPIQEVIAEMTNGGVDRS  269 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~-g~~~Vi~~~~~~~~~~~~~~-~G~~--~vv~~~~~~~~~~~~i~~~~~~g~Dvv  269 (361)
                      .+.+|||+|+ |.+|...++.+... |..+|+++++++.+.+.+.+ +...  ..+..+-.+   .+.+..... ++|+|
T Consensus        20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d---~~~l~~~~~-~~D~V   95 (344)
T 2gn4_A           20 DNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRD---LERLNYALE-GVDIC   95 (344)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTC---HHHHHHHTT-TCSEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCC---HHHHHHHHh-cCCEE
Confidence            4679999997 99999999888777 86689999999887765543 3211  222222222   123444433 69999


Q ss_pred             EEccCC
Q 018072          270 VECTGN  275 (361)
Q Consensus       270 id~~g~  275 (361)
                      |++++.
T Consensus        96 ih~Aa~  101 (344)
T 2gn4_A           96 IHAAAL  101 (344)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999874

>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A

Probab=95.78  E-value=0.042  Score=48.95  Aligned_cols=104  Identities=16%  Similarity=0.187  Sum_probs=67.0

Q ss_pred             hcCCCCCCEEEEEcCCHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHH--c
Q 018072          190 VAKPERGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEM--T  262 (361)
Q Consensus       190 ~~~~~~g~~VlI~G~g~vG~~a~~~a~~~-g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~--~  262 (361)
                      ..++++|++||=+|+|+ |..+..++... +..+|+++|.++++++.+++    +|...+.. ...+  ..+....+  .
T Consensus        78 ~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~-~~~D--~~~~~~~~~~~  153 (274)
T 3ajd_A           78 VLNPREDDFILDMCAAP-GGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTII-INAD--MRKYKDYLLKN  153 (274)
T ss_dssp             HHCCCTTCEEEETTCTT-CHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEE-EESC--HHHHHHHHHHT
T ss_pred             HhCCCCcCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEE-EeCC--hHhcchhhhhc
Confidence            45678999998888765 66666777765 43599999999998888754    46542211 1122  22222211  1


Q ss_pred             CCCccEEEEc---cCC---------------------hHHHHHHHHHhcCCCcEEEEEcC
Q 018072          263 NGGVDRSVEC---TGN---------------------IDNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       263 ~~g~Dvvid~---~g~---------------------~~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      .+.||+|+-.   .|.                     ...+..+.+.|+++ |+++....
T Consensus       154 ~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~lv~stc  212 (274)
T 3ajd_A          154 EIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKD-GELVYSTC  212 (274)
T ss_dssp             TCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEE-EEEEEEES
T ss_pred             cccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCC-CEEEEEEC
Confidence            3479998864   221                     34577888899997 99887543

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=95.78  E-value=0.054  Score=52.24  Aligned_cols=95  Identities=12%  Similarity=0.060  Sum_probs=58.5

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHH-cCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEc
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  272 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~-g~~~Vi~~~~~~~~~~~~~~-~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~  272 (361)
                      .+.+|+|+|+|.+|..++..+... +. +|++++++.++.+.+.+ .+... +..+-.+  .. .+.+.. .++|+||++
T Consensus        22 ~~k~VlIiGAGgiG~aia~~L~~~~g~-~V~v~~R~~~ka~~la~~~~~~~-~~~D~~d--~~-~l~~~l-~~~DvVIn~   95 (467)
T 2axq_A           22 MGKNVLLLGSGFVAQPVIDTLAANDDI-NVTVACRTLANAQALAKPSGSKA-ISLDVTD--DS-ALDKVL-ADNDVVISL   95 (467)
T ss_dssp             -CEEEEEECCSTTHHHHHHHHHTSTTE-EEEEEESSHHHHHHHHGGGTCEE-EECCTTC--HH-HHHHHH-HTSSEEEEC
T ss_pred             CCCEEEEECChHHHHHHHHHHHhCCCC-eEEEEECCHHHHHHHHHhcCCcE-EEEecCC--HH-HHHHHH-cCCCEEEEC
Confidence            356899999999999998888777 56 89999999988776654 34322 2222222  21 222221 158999999


Q ss_pred             cCChHHHHHHHHHhcCCCcEEEEE
Q 018072          273 TGNIDNMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       273 ~g~~~~~~~~~~~l~~~~G~iv~~  296 (361)
                      ++..........++..+ -.++..
T Consensus        96 tp~~~~~~v~~a~l~~g-~~vvd~  118 (467)
T 2axq_A           96 IPYTFHPNVVKSAIRTK-TDVVTS  118 (467)
T ss_dssp             SCGGGHHHHHHHHHHHT-CEEEEC
T ss_pred             CchhhhHHHHHHHHhcC-CEEEEe
Confidence            98643323344455553 444443

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=95.75  E-value=0.027  Score=49.01  Aligned_cols=70  Identities=27%  Similarity=0.386  Sum_probs=44.1

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 018072          197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  275 (361)
Q Consensus       197 ~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~  275 (361)
                      .+|||+|+ |++|...+..+...|. +|+++++++++.+.      ....|..+. ..+.+.+..+ .+++|++|+++|.
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~------~~~~D~~~~-~~~~~~~~~~-~~~~d~vi~~Ag~   72 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGH-TVIGIDRGQADIEA------DLSTPGGRE-TAVAAVLDRC-GGVLDGLVCCAGV   72 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSSSEEC------CTTSHHHHH-HHHHHHHHHH-TTCCSEEEECCCC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCChhHccc------cccCCcccH-HHHHHHHHHc-CCCccEEEECCCC
Confidence            36899998 9999999998888898 89999888764321      000000000 1122222222 2479999999874

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=95.75  E-value=0.026  Score=50.64  Aligned_cols=75  Identities=20%  Similarity=0.229  Sum_probs=51.4

Q ss_pred             CCCCEEEEEc-CCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-Hc----CCCE-EEcCCCCCccHHHHHHHHcCCCc
Q 018072          194 ERGSSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KF----GVTD-FVNTSEHDRPIQEVIAEMTNGGV  266 (361)
Q Consensus       194 ~~g~~VlI~G-~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~----G~~~-vv~~~~~~~~~~~~i~~~~~~g~  266 (361)
                      -+|.++||+| +|++|.+.+..+...|+ +|+++++++++.+.+. ++    +... ..+..+.     +.+.+... .+
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~-~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~-----~~~~~~~~-~~  189 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADD-----ASRAEAVK-GA  189 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSH-----HHHHHHTT-TC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCH-----HHHHHHHH-hC
Confidence            3678999999 59999999999999998 6999999987766543 22    3222 2333221     13333322 48


Q ss_pred             cEEEEccCC
Q 018072          267 DRSVECTGN  275 (361)
Q Consensus       267 Dvvid~~g~  275 (361)
                      |++|+++|.
T Consensus       190 DvlVn~ag~  198 (287)
T 1lu9_A          190 HFVFTAGAI  198 (287)
T ss_dssp             SEEEECCCT
T ss_pred             CEEEECCCc
Confidence            999999963

>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}

Probab=95.74  E-value=0.056  Score=50.92  Aligned_cols=99  Identities=15%  Similarity=0.137  Sum_probs=66.5

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcCCCccE
Q 018072          193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGGVDR  268 (361)
Q Consensus       193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dv  268 (361)
                      +++|++||=+|+|. |..++.+|+ .|+ .|+++|.+++.++.+++    .|.+.-+.  ..+  ..+.+..+.+ .||+
T Consensus       212 ~~~g~~VLDlg~Gt-G~~sl~~a~-~ga-~V~avDis~~al~~a~~n~~~ng~~~~~~--~~D--~~~~l~~~~~-~fD~  283 (393)
T 4dmg_A          212 VRPGERVLDVYSYV-GGFALRAAR-KGA-YALAVDKDLEALGVLDQAALRLGLRVDIR--HGE--ALPTLRGLEG-PFHH  283 (393)
T ss_dssp             CCTTCEEEEESCTT-THHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHHTCCCEEE--ESC--HHHHHHTCCC-CEEE
T ss_pred             hcCCCeEEEcccch-hHHHHHHHH-cCC-eEEEEECCHHHHHHHHHHHHHhCCCCcEE--Ecc--HHHHHHHhcC-CCCE
Confidence            45799999987753 555555555 377 59999999999888765    45542222  222  4444444433 5999


Q ss_pred             EEEccCC---------------hHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072          269 SVECTGN---------------IDNMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       269 vid~~g~---------------~~~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      |+-....               ...+..+.+.|+++ |.++.+....
T Consensus       284 Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpG-G~Lv~~s~s~  329 (393)
T 4dmg_A          284 VLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEE-GFLWLSSCSY  329 (393)
T ss_dssp             EEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEE-EEEEEEECCT
T ss_pred             EEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEECCC
Confidence            9975543               24677888999997 9998776544

>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*

Probab=95.73  E-value=0.037  Score=53.27  Aligned_cols=101  Identities=19%  Similarity=0.264  Sum_probs=67.3

Q ss_pred             hcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcCC
Q 018072          190 VAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNG  264 (361)
Q Consensus       190 ~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g-~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~~  264 (361)
                      ...+++|++||=+|+|+ |..++++|..++ ...|+++|.++++++.+++    +|.. + .....+  ..+ +.....+
T Consensus        96 ~L~~~~g~~VLDlgaGp-G~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v-~~~~~D--a~~-l~~~~~~  169 (464)
T 3m6w_A           96 LLDPKPGERVLDLAAAP-GGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-L-AVTQAP--PRA-LAEAFGT  169 (464)
T ss_dssp             HHCCCTTCEEEESSCTT-CHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-C-EEECSC--HHH-HHHHHCS
T ss_pred             hcCcCCCCEEEEEcCCc-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-E-EEEECC--HHH-hhhhccc
Confidence            34678999998888765 666777777764 2489999999999888754    5776 2 222222  222 2222345


Q ss_pred             CccEEEE---ccCC-------------------------hHHHHHHHHHhcCCCcEEEEEc
Q 018072          265 GVDRSVE---CTGN-------------------------IDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       265 g~Dvvid---~~g~-------------------------~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      .||+|+-   |+|.                         ...+..+++.|+++ |+++...
T Consensus       170 ~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpG-G~LvysT  229 (464)
T 3m6w_A          170 YFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPG-GVLVYST  229 (464)
T ss_dssp             CEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEE-EEEEEEE
T ss_pred             cCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCC-cEEEEEe
Confidence            7999985   3221                         34567888899997 9988643

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=95.73  E-value=0.019  Score=50.38  Aligned_cols=80  Identities=20%  Similarity=0.331  Sum_probs=50.9

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHH-cCCCEE-EcCCCCC-ccHHHHHHHHcC--CCccE
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK-FGVTDF-VNTSEHD-RPIQEVIAEMTN--GGVDR  268 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~-~G~~~v-v~~~~~~-~~~~~~i~~~~~--~g~Dv  268 (361)
                      |.++||+|+ +++|...++.+...|. .+|+.+++++++++.+.+ ++.... +..+-.+ ..+.+.+.....  +++|+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   81 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS   81 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence            568999987 8999998876666652 288999999888776643 444322 2222222 123333333222  37999


Q ss_pred             EEEccCC
Q 018072          269 SVECTGN  275 (361)
Q Consensus       269 vid~~g~  275 (361)
                      +++++|.
T Consensus        82 lvnnAg~   88 (254)
T 3kzv_A           82 LVANAGV   88 (254)
T ss_dssp             EEEECCC
T ss_pred             EEECCcc
Confidence            9999884

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=95.73  E-value=0.0074  Score=53.43  Aligned_cols=76  Identities=18%  Similarity=0.267  Sum_probs=49.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCC-ccHHHHHHHHcC--CCccEEE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD-RPIQEVIAEMTN--GGVDRSV  270 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~-~~~~~~i~~~~~--~g~Dvvi  270 (361)
                      .+.++||+|+ |++|...++.+...|+ +|++++++.++.+..   .+ ..+..+-.+ ..+.+.+.+...  +++|+++
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~---~~-~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv  101 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNY-RVVATSRSIKPSADP---DI-HTVAGDISKPETADRIVREGIERFGRIDSLV  101 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCCCCSST---TE-EEEESCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccC---ce-EEEEccCCCHHHHHHHHHHHHHHCCCCCEEE
Confidence            4678999987 9999999998888999 899998887653221   11 222222222 123333333222  3799999


Q ss_pred             EccCC
Q 018072          271 ECTGN  275 (361)
Q Consensus       271 d~~g~  275 (361)
                      +++|.
T Consensus       102 ~nAg~  106 (260)
T 3un1_A          102 NNAGV  106 (260)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99873

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=95.71  E-value=0.07  Score=49.55  Aligned_cols=91  Identities=14%  Similarity=0.175  Sum_probs=63.5

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  275 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~  275 (361)
                      ..+|.|+|.|.+|...++.+...|. .|+++++++++.+.+.+.|+..     ..+  ..+.+...  ..+|+||-++..
T Consensus        22 ~mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~~~g~~~-----~~s--~~e~~~~a--~~~DvVi~~vp~   91 (358)
T 4e21_A           22 SMQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLNVNAVQALEREGIAG-----ARS--IEEFCAKL--VKPRVVWLMVPA   91 (358)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTCBC-----CSS--HHHHHHHS--CSSCEEEECSCG
T ss_pred             CCEEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCEE-----eCC--HHHHHhcC--CCCCEEEEeCCH
Confidence            3689999999999999998888898 9999999999999888877531     111  44444332  245999999987


Q ss_pred             hHHHHHHHHH----hcCCCcEEEEEcC
Q 018072          276 IDNMISAFEC----VHDGWGVAVLVGV  298 (361)
Q Consensus       276 ~~~~~~~~~~----l~~~~G~iv~~g~  298 (361)
                      . .+...++.    ++++ ..++.++.
T Consensus        92 ~-~v~~vl~~l~~~l~~g-~iiId~st  116 (358)
T 4e21_A           92 A-VVDSMLQRMTPLLAAN-DIVIDGGN  116 (358)
T ss_dssp             G-GHHHHHHHHGGGCCTT-CEEEECSS
T ss_pred             H-HHHHHHHHHHhhCCCC-CEEEeCCC
Confidence            5 44444443    3443 45555543

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=95.71  E-value=0.027  Score=49.75  Aligned_cols=80  Identities=23%  Similarity=0.280  Sum_probs=51.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHH----HHcCCCE-EEcCCCCC-ccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEA----KKFGVTD-FVNTSEHD-RPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~-~~~~~~~~----~~~G~~~-vv~~~~~~-~~~~~~i~~~~~--~  264 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+++++ ++++.+.+    ++.+... .+..+-.+ ..+.+.+.....  +
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG   98 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4678999988 9999999998888998 8888888 66655433    3345543 22222222 123333332221  3


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      ++|++|+++|.
T Consensus        99 ~~d~vi~~Ag~  109 (274)
T 1ja9_A           99 GLDFVMSNSGM  109 (274)
T ss_dssp             CEEEEECCCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=95.70  E-value=0.02  Score=50.58  Aligned_cols=79  Identities=10%  Similarity=0.174  Sum_probs=49.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCh---hhHHHH----HHcCCCEE-EcCCCCC-ccHHHHHHHHcC-
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS---KRFEEA----KKFGVTDF-VNTSEHD-RPIQEVIAEMTN-  263 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~---~~~~~~----~~~G~~~v-v~~~~~~-~~~~~~i~~~~~-  263 (361)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++..   ++.+.+    ++.|.... +..+-.+ ..+.+.+..... 
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   88 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESV-NLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKE   88 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSC-EEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4689999987 8999999998888899 888876543   333332    22344322 2222222 123333333222 


Q ss_pred             -CCccEEEEccC
Q 018072          264 -GGVDRSVECTG  274 (361)
Q Consensus       264 -~g~Dvvid~~g  274 (361)
                       +++|++|+++|
T Consensus        89 ~g~iD~lvnnAg  100 (262)
T 3ksu_A           89 FGKVDIAINTVG  100 (262)
T ss_dssp             HCSEEEEEECCC
T ss_pred             cCCCCEEEECCC
Confidence             37999999998

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=95.70  E-value=0.026  Score=49.30  Aligned_cols=80  Identities=24%  Similarity=0.284  Sum_probs=50.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHH----HHcCCCEE-EcCCCCC-ccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEEA----KKFGVTDF-VNTSEHD-RPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~-~~~~~~~~----~~~G~~~v-v~~~~~~-~~~~~~i~~~~~--~  264 (361)
                      .+.++||+|+ |++|...++.+...|+ +|+.+++ ++++.+.+    ++.|.... +..+-.+ .++.+.+.+...  +
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGY-NVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG   81 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            3578999987 9999999998889999 7777665 44544433    33455432 2222222 123333333222  3


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      ++|++++++|.
T Consensus        82 ~id~lv~nAg~   92 (246)
T 3osu_A           82 SLDVLVNNAGI   92 (246)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999884

>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}

Probab=95.70  E-value=0.015  Score=51.36  Aligned_cols=101  Identities=16%  Similarity=0.144  Sum_probs=65.3

Q ss_pred             hcCCC-CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCC--EEEcCCCCCccHHHHHHHHc
Q 018072          190 VAKPE-RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT--DFVNTSEHDRPIQEVIAEMT  262 (361)
Q Consensus       190 ~~~~~-~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~--~vv~~~~~~~~~~~~i~~~~  262 (361)
                      ...++ ++++||=+|+|. |..+..+++.... +|+++|.+++..+.+++    .+..  ..+...+    +.+....+.
T Consensus        43 ~~~~~~~~~~vLDlG~G~-G~~~~~la~~~~~-~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D----~~~~~~~~~  116 (259)
T 3lpm_A           43 FSYLPIRKGKIIDLCSGN-GIIPLLLSTRTKA-KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYD----LKKITDLIP  116 (259)
T ss_dssp             HCCCCSSCCEEEETTCTT-THHHHHHHTTCCC-EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSC----GGGGGGTSC
T ss_pred             HhcCCCCCCEEEEcCCch-hHHHHHHHHhcCC-cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECc----HHHhhhhhc
Confidence            35667 889999988864 5666666666554 99999999998888765    3443  1121111    111111122


Q ss_pred             CCCccEEEEccCC--------------------------hHHHHHHHHHhcCCCcEEEEEc
Q 018072          263 NGGVDRSVECTGN--------------------------IDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       263 ~~g~Dvvid~~g~--------------------------~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      .+.||+|+....-                          ...+..+.+.|+++ |+++++-
T Consensus       117 ~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~  176 (259)
T 3lpm_A          117 KERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQG-GKANFVH  176 (259)
T ss_dssp             TTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             cCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCC-cEEEEEE
Confidence            3489999984220                          23667888999997 9998864

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=95.70  E-value=0.023  Score=49.35  Aligned_cols=80  Identities=16%  Similarity=0.196  Sum_probs=51.0

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCC------eEEEEcCChhhHHHHHH----cCCCE-EEcCCCCC-ccHHHHHHHHc
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGAS------RIIGVDRSSKRFEEAKK----FGVTD-FVNTSEHD-RPIQEVIAEMT  262 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~------~Vi~~~~~~~~~~~~~~----~G~~~-vv~~~~~~-~~~~~~i~~~~  262 (361)
                      +.++||+|+ |++|...++.+...|+.      +|+++++++++.+.+.+    .+... .+..+-.+ ..+.+.+....
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            567999988 99999988888778874      78899998877665432    24322 22222222 12333333322


Q ss_pred             --CCCccEEEEccCC
Q 018072          263 --NGGVDRSVECTGN  275 (361)
Q Consensus       263 --~~g~Dvvid~~g~  275 (361)
                        .+++|++|+++|.
T Consensus        82 ~~~g~id~li~~Ag~   96 (244)
T 2bd0_A           82 ERYGHIDCLVNNAGV   96 (244)
T ss_dssp             HHTSCCSEEEECCCC
T ss_pred             HhCCCCCEEEEcCCc
Confidence              1379999999873

>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18

Probab=95.69  E-value=0.071  Score=47.68  Aligned_cols=96  Identities=16%  Similarity=0.106  Sum_probs=67.0

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCC---EEEcCCCCCccHHHHHHHHcCC
Q 018072          192 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT---DFVNTSEHDRPIQEVIAEMTNG  264 (361)
Q Consensus       192 ~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~---~vv~~~~~~~~~~~~i~~~~~~  264 (361)
                      .++++.+||-+|+|. |..+..+++..|. +|+++|.+++.++.+++    .|..   .++..+-.+  +     .+.++
T Consensus        79 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~-----~~~~~  149 (297)
T 2o57_A           79 VLQRQAKGLDLGAGY-GGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLE--I-----PCEDN  149 (297)
T ss_dssp             CCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTS--C-----SSCTT
T ss_pred             CCCCCCEEEEeCCCC-CHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCccc--C-----CCCCC
Confidence            788999999999974 7788888887787 99999999988777754    3432   122211111  0     01234


Q ss_pred             CccEEEEccC-----C-hHHHHHHHHHhcCCCcEEEEEc
Q 018072          265 GVDRSVECTG-----N-IDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       265 g~Dvvid~~g-----~-~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      .||+|+..-.     . ...+..+.+.|+++ |++++..
T Consensus       150 ~fD~v~~~~~l~~~~~~~~~l~~~~~~Lkpg-G~l~~~~  187 (297)
T 2o57_A          150 SYDFIWSQDAFLHSPDKLKVFQECARVLKPR-GVMAITD  187 (297)
T ss_dssp             CEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             CEeEEEecchhhhcCCHHHHHHHHHHHcCCC-eEEEEEE
Confidence            7999997532     1 34678899999997 9988775

>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*

Probab=95.69  E-value=0.023  Score=50.81  Aligned_cols=72  Identities=15%  Similarity=0.079  Sum_probs=50.4

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChH
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  277 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~  277 (361)
                      +|.|+|+|.+|...+..+.. |. +|+++++++++.+.+.+.|.... .   .. +       .. ...|+||.++..+.
T Consensus         3 ~i~iiG~G~~G~~~a~~l~~-g~-~V~~~~~~~~~~~~~~~~g~~~~-~---~~-~-------~~-~~~D~vi~~v~~~~   67 (289)
T 2cvz_A            3 KVAFIGLGAMGYPMAGHLAR-RF-PTLVWNRTFEKALRHQEEFGSEA-V---PL-E-------RV-AEARVIFTCLPTTR   67 (289)
T ss_dssp             CEEEECCSTTHHHHHHHHHT-TS-CEEEECSSTHHHHHHHHHHCCEE-C---CG-G-------GG-GGCSEEEECCSSHH
T ss_pred             eEEEEcccHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHHCCCccc-C---HH-H-------HH-hCCCEEEEeCCChH
Confidence            58899999999988777767 88 79999999998888776665421 1   11 0       00 14788888888755


Q ss_pred             HHHHHHH
Q 018072          278 NMISAFE  284 (361)
Q Consensus       278 ~~~~~~~  284 (361)
                      .+...++
T Consensus        68 ~~~~v~~   74 (289)
T 2cvz_A           68 EVYEVAE   74 (289)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            4554443

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=95.69  E-value=0.032  Score=49.41  Aligned_cols=81  Identities=17%  Similarity=0.140  Sum_probs=51.4

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEE-cCChhhHHHHH----HcCCCE-EEcCCCCC-ccHHHHHHHHcC--
Q 018072          194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKRFEEAK----KFGVTD-FVNTSEHD-RPIQEVIAEMTN--  263 (361)
Q Consensus       194 ~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~-~~~~~~~~~~~----~~G~~~-vv~~~~~~-~~~~~~i~~~~~--  263 (361)
                      ..+.++||+|+ |++|...++.+...|+ +|+.+ .+++++.+.+.    +.+... .+..+-.+ .++.+.+.....  
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  102 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGW-RVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF  102 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            45778999988 9999999999999999 67665 77776655442    334432 22222222 123333333322  


Q ss_pred             CCccEEEEccCC
Q 018072          264 GGVDRSVECTGN  275 (361)
Q Consensus       264 ~g~Dvvid~~g~  275 (361)
                      +++|++|+++|.
T Consensus       103 g~id~li~nAg~  114 (272)
T 4e3z_A          103 GRLDGLVNNAGI  114 (272)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            378999999873

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=95.69  E-value=0.02  Score=50.78  Aligned_cols=73  Identities=21%  Similarity=0.237  Sum_probs=48.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEE--EcCCCCCccHHHHHHHHcC--CCccEE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF--VNTSEHDRPIQEVIAEMTN--GGVDRS  269 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~v--v~~~~~~~~~~~~i~~~~~--~g~Dvv  269 (361)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.++++++.     .+.....  .|..+.+ ++.+.+.....  +++|++
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~-----~~~~~~~~~~Dv~~~~-~v~~~~~~~~~~~G~iDil   82 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGA-QVLTTARARPE-----GLPEELFVEADLTTKE-GCAIVAEATRQRLGGVDVI   82 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTC-EEEEEESSCCT-----TSCTTTEEECCTTSHH-HHHHHHHHHHHHTSSCSEE
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCC-EEEEEECCchh-----CCCcEEEEEcCCCCHH-HHHHHHHHHHHHcCCCCEE
Confidence            5789999987 8999999999999999 89999887542     1111112  2222221 23333333222  379999


Q ss_pred             EEccC
Q 018072          270 VECTG  274 (361)
Q Consensus       270 id~~g  274 (361)
                      ++++|
T Consensus        83 VnnAG   87 (261)
T 4h15_A           83 VHMLG   87 (261)
T ss_dssp             EECCC
T ss_pred             EECCC
Confidence            99887

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=95.68  E-value=0.036  Score=48.72  Aligned_cols=79  Identities=15%  Similarity=0.178  Sum_probs=49.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCC-hhhHHHHHH----cCCCE-EEcCCCCC-ccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS-SKRFEEAKK----FGVTD-FVNTSEHD-RPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~-~~~~~~~~~----~G~~~-vv~~~~~~-~~~~~~i~~~~~--~  264 (361)
                      .+.++||+|+ |++|...++.+...|+ +|++++++ ++..+.+++    .+... .+..+-.+ .++.+.+.....  +
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   84 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGY-SVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFG   84 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            3578999988 9999999998888999 78877554 444444433    22222 22222222 223333333322  3


Q ss_pred             CccEEEEccC
Q 018072          265 GVDRSVECTG  274 (361)
Q Consensus       265 g~Dvvid~~g  274 (361)
                      ++|++|+++|
T Consensus        85 ~id~lv~~Ag   94 (264)
T 3i4f_A           85 KIDFLINNAG   94 (264)
T ss_dssp             CCCEEECCCC
T ss_pred             CCCEEEECCc
Confidence            7999999998

>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}

Probab=95.67  E-value=0.026  Score=47.59  Aligned_cols=98  Identities=13%  Similarity=0.093  Sum_probs=66.2

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC----EEEcCCCCCccHHHHHHHHcCCCccE
Q 018072          193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT----DFVNTSEHDRPIQEVIAEMTNGGVDR  268 (361)
Q Consensus       193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~----~vv~~~~~~~~~~~~i~~~~~~g~Dv  268 (361)
                      ++++.+||-+|+|. |..+..+++. |..+|+++|.++..++.+++....    .++..+..+  +     .+.++.+|+
T Consensus        40 ~~~~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~--~-----~~~~~~fD~  110 (215)
T 2pxx_A           40 LRPEDRILVLGCGN-SALSYELFLG-GFPNVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRK--L-----DFPSASFDV  110 (215)
T ss_dssp             CCTTCCEEEETCTT-CSHHHHHHHT-TCCCEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTS--C-----CSCSSCEEE
T ss_pred             cCCCCeEEEECCCC-cHHHHHHHHc-CCCcEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhc--C-----CCCCCcccE
Confidence            47889999999976 7777777766 444899999999999988774321    222211111  1     122347999


Q ss_pred             EEEccC---------------------ChHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072          269 SVECTG---------------------NIDNMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       269 vid~~g---------------------~~~~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      |+....                     ....+..+.+.|+++ |++++.....
T Consensus       111 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~li~~~~~~  162 (215)
T 2pxx_A          111 VLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPG-GRFISMTSAA  162 (215)
T ss_dssp             EEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEE-EEEEEEESCC
T ss_pred             EEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCC-CEEEEEeCCC
Confidence            996321                     135677888999997 9998886533

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=95.67  E-value=0.05  Score=47.87  Aligned_cols=80  Identities=20%  Similarity=0.321  Sum_probs=50.5

Q ss_pred             CCCEEEEEcC---CHHHHHHHHHHHHcCCCeEEEEcCChh---hHHHHHH-cCCCEEEcCCCCC-ccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSSK---RFEEAKK-FGVTDFVNTSEHD-RPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~---g~vG~~a~~~a~~~g~~~Vi~~~~~~~---~~~~~~~-~G~~~vv~~~~~~-~~~~~~i~~~~~--~  264 (361)
                      .+.++||+|+   |++|...++.+...|+ +|++++++++   ..+.+.+ .+....+..+-.+ .++.+.+.....  +
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFG   85 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            3678999985   6999999988888898 8999988875   3333332 3433333322222 123333333221  3


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      ++|++|+++|.
T Consensus        86 ~iD~lv~~Ag~   96 (261)
T 2wyu_A           86 GLDYLVHAIAF   96 (261)
T ss_dssp             SEEEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=95.67  E-value=0.019  Score=50.57  Aligned_cols=78  Identities=13%  Similarity=0.190  Sum_probs=50.3

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHH---cCCCeEEEEcCChhhHHHHHH-c-----CCCE-EEcCCCCC-ccHHHHHHHHcC
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARI---AGASRIIGVDRSSKRFEEAKK-F-----GVTD-FVNTSEHD-RPIQEVIAEMTN  263 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~---~g~~~Vi~~~~~~~~~~~~~~-~-----G~~~-vv~~~~~~-~~~~~~i~~~~~  263 (361)
                      +.++||+|+ |++|...++.+..   .|+ +|+.+++++++.+.+.+ +     +... .+..+-.+ ..+.+.+.....
T Consensus         6 ~k~~lVTGas~gIG~~ia~~l~~~~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (259)
T 1oaa_A            6 CAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             SEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHhhcCCC-eEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHh
Confidence            568899987 8999998887776   798 89999999887665432 2     3322 22222222 224444444322


Q ss_pred             ----CCcc--EEEEccC
Q 018072          264 ----GGVD--RSVECTG  274 (361)
Q Consensus       264 ----~g~D--vvid~~g  274 (361)
                          +.+|  ++|+++|
T Consensus        85 ~~~~g~~d~~~lvnnAg  101 (259)
T 1oaa_A           85 LPRPEGLQRLLLINNAA  101 (259)
T ss_dssp             SCCCTTCCEEEEEECCC
T ss_pred             ccccccCCccEEEECCc
Confidence                3678  9999887

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=95.66  E-value=0.032  Score=50.82  Aligned_cols=76  Identities=20%  Similarity=0.200  Sum_probs=50.6

Q ss_pred             CCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc-----CCC-EEE---cCCCCCccHHHHHHHHc
Q 018072          193 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-----GVT-DFV---NTSEHDRPIQEVIAEMT  262 (361)
Q Consensus       193 ~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~-----G~~-~vv---~~~~~~~~~~~~i~~~~  262 (361)
                      ..++.+|||+|+ |.+|...+..+...|. +|++++++.++.+.+.+.     +.. ..+   |..+.+     .+..+.
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~-----~~~~~~   81 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQG-----AYDEVI   81 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTT-----TTTTTT
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChH-----HHHHHH
Confidence            345789999998 9999999998888898 899999988776544331     222 122   222221     111221


Q ss_pred             CCCccEEEEccCC
Q 018072          263 NGGVDRSVECTGN  275 (361)
Q Consensus       263 ~~g~Dvvid~~g~  275 (361)
                       .++|+||++++.
T Consensus        82 -~~~d~vih~A~~   93 (342)
T 1y1p_A           82 -KGAAGVAHIASV   93 (342)
T ss_dssp             -TTCSEEEECCCC
T ss_pred             -cCCCEEEEeCCC
Confidence             168999999874

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=95.64  E-value=0.067  Score=49.31  Aligned_cols=92  Identities=16%  Similarity=0.129  Sum_probs=63.8

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 018072          197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  276 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~  276 (361)
                      .+|.|+|.|.+|...+..++..|. +|+++++++++.+.+.++|+...     .+  ..+.+... ..+.|+||-++.. 
T Consensus         9 ~kIgIIG~G~mG~slA~~L~~~G~-~V~~~dr~~~~~~~a~~~G~~~~-----~~--~~e~~~~a-~~~aDlVilavP~-   78 (341)
T 3ktd_A            9 RPVCILGLGLIGGSLLRDLHAANH-SVFGYNRSRSGAKSAVDEGFDVS-----AD--LEATLQRA-AAEDALIVLAVPM-   78 (341)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHTTCCEE-----SC--HHHHHHHH-HHTTCEEEECSCH-
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeee-----CC--HHHHHHhc-ccCCCEEEEeCCH-
Confidence            579999999999999999999997 89999999999999999997431     11  33333321 0146999999985 


Q ss_pred             HHHHHHHHH---hcCCCcEEEEEcCC
Q 018072          277 DNMISAFEC---VHDGWGVAVLVGVP  299 (361)
Q Consensus       277 ~~~~~~~~~---l~~~~G~iv~~g~~  299 (361)
                      ..+...++.   ++++ ..++.++..
T Consensus        79 ~~~~~vl~~l~~~~~~-~iv~Dv~Sv  103 (341)
T 3ktd_A           79 TAIDSLLDAVHTHAPN-NGFTDVVSV  103 (341)
T ss_dssp             HHHHHHHHHHHHHCTT-CCEEECCSC
T ss_pred             HHHHHHHHHHHccCCC-CEEEEcCCC
Confidence            443333332   3444 556566543

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=95.63  E-value=0.026  Score=49.59  Aligned_cols=80  Identities=20%  Similarity=0.281  Sum_probs=49.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHH----HcCCCE-EEcCCCCC-ccHHHHHHHHc--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFE-EAK----KFGVTD-FVNTSEHD-RPIQEVIAEMT--NG  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~-~~~----~~G~~~-vv~~~~~~-~~~~~~i~~~~--~~  264 (361)
                      .+.++||+|+ |++|...++.+...|+ +|++++++.++.+ .++    +.+... .+..+-.+ ..+.+.+....  -+
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   91 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLG   91 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            3578999988 9999999998888898 8999988654432 222    234432 22222222 12333333322  13


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      .+|++|+++|.
T Consensus        92 ~id~li~~Ag~  102 (265)
T 1h5q_A           92 PISGLIANAGV  102 (265)
T ss_dssp             SEEEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            69999999874

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=95.63  E-value=0.031  Score=50.16  Aligned_cols=93  Identities=16%  Similarity=0.254  Sum_probs=56.7

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCh-------hhHHHHH---HcCCCEEEcCCCCCccHHHHHHHHcCC
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS-------KRFEEAK---KFGVTDFVNTSEHDRPIQEVIAEMTNG  264 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~-------~~~~~~~---~~G~~~vv~~~~~~~~~~~~i~~~~~~  264 (361)
                      +.+|+|+|+ |.+|...++.+...|. +|+++++++       ++.+.++   ..|+..+ ..+-.+  . +.+..... 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v-~~D~~d--~-~~l~~~~~-   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGN-PTYALVRKTITAANPETKEELIDNYQSLGVILL-EGDIND--H-ETLVKAIK-   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTC-CEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEE-ECCTTC--H-HHHHHHHT-
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCC-cEEEEECCCcccCChHHHHHHHHHHHhCCCEEE-EeCCCC--H-HHHHHHHh-
Confidence            357999998 9999999998888897 888888886       5554433   3455432 222222  2 23333332 


Q ss_pred             CccEEEEccCCh--HHHHHHHHHhcCCC--cEEE
Q 018072          265 GVDRSVECTGNI--DNMISAFECVHDGW--GVAV  294 (361)
Q Consensus       265 g~Dvvid~~g~~--~~~~~~~~~l~~~~--G~iv  294 (361)
                      ++|+||++++..  ......++.+...+  .+++
T Consensus        76 ~~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v  109 (307)
T 2gas_A           76 QVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFF  109 (307)
T ss_dssp             TCSEEEECSSSSCGGGHHHHHHHHHHHCCCSEEE
T ss_pred             CCCEEEECCcccccccHHHHHHHHHhcCCceEEe
Confidence            699999998752  22234444444320  4665

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=95.62  E-value=0.038  Score=53.96  Aligned_cols=80  Identities=18%  Similarity=0.211  Sum_probs=52.9

Q ss_pred             CCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhh-------HHHHHHcCCCEEE-cCCCCC-ccHHHHHHHHc
Q 018072          193 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-------FEEAKKFGVTDFV-NTSEHD-RPIQEVIAEMT  262 (361)
Q Consensus       193 ~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~-------~~~~~~~G~~~vv-~~~~~~-~~~~~~i~~~~  262 (361)
                      ++++.++||+|+ |++|...+..+...|+.+|+.+.++...       .+.+++.|....+ .-+-.+ ..+.+.+..  
T Consensus       256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~--  333 (511)
T 2z5l_A          256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA--  333 (511)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH--
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc--
Confidence            578899999987 9999999988888898678888887531       2334445654322 222222 123333322  


Q ss_pred             CCCccEEEEccCC
Q 018072          263 NGGVDRSVECTGN  275 (361)
Q Consensus       263 ~~g~Dvvid~~g~  275 (361)
                       +.+|+||++.|.
T Consensus       334 -~~ld~VVh~AGv  345 (511)
T 2z5l_A          334 -YPPNAVFHTAGI  345 (511)
T ss_dssp             -SCCSEEEECCCC
T ss_pred             -CCCcEEEECCcc
Confidence             479999999873

>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*

Probab=95.61  E-value=0.044  Score=47.81  Aligned_cols=97  Identities=16%  Similarity=0.119  Sum_probs=68.4

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCC--E-EEcCCCCCccHHHHHHHHcC
Q 018072          191 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT--D-FVNTSEHDRPIQEVIAEMTN  263 (361)
Q Consensus       191 ~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~--~-vv~~~~~~~~~~~~i~~~~~  263 (361)
                      ..++++.+||-+|+|. |..+..+++..+. +|+++|.+++.++.+++    .|..  . ++..+-.+  +     .+.+
T Consensus        42 ~~~~~~~~vLDiG~G~-G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~-----~~~~  112 (257)
T 3f4k_A           42 NELTDDAKIADIGCGT-GGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDN--L-----PFQN  112 (257)
T ss_dssp             CCCCTTCEEEEETCTT-SHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS--C-----SSCT
T ss_pred             hcCCCCCeEEEeCCCC-CHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhh--C-----CCCC
Confidence            4678999999999986 8888899998876 99999999988887654    3432  1 22211111  1     0123


Q ss_pred             CCccEEEEc-----cCChHHHHHHHHHhcCCCcEEEEEc
Q 018072          264 GGVDRSVEC-----TGNIDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       264 ~g~Dvvid~-----~g~~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      +.||+|+..     ......+..+.+.|+++ |++++..
T Consensus       113 ~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pg-G~l~~~~  150 (257)
T 3f4k_A          113 EELDLIWSEGAIYNIGFERGMNEWSKYLKKG-GFIAVSE  150 (257)
T ss_dssp             TCEEEEEEESCSCCCCHHHHHHHHHTTEEEE-EEEEEEE
T ss_pred             CCEEEEEecChHhhcCHHHHHHHHHHHcCCC-cEEEEEE
Confidence            479999753     33345678888999997 9988775

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=95.60  E-value=0.022  Score=53.58  Aligned_cols=89  Identities=13%  Similarity=0.066  Sum_probs=59.2

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      .|.+|.|+|.|.+|...++.++..|. +|++.+++..+.+.+.++|+...   .  +  +.+.+     ...|+|+.++.
T Consensus       190 ~gktvGIIGlG~IG~~vA~~l~a~G~-~V~~~d~~~~~~~~~~~~G~~~~---~--~--l~ell-----~~aDvV~l~~P  256 (393)
T 2nac_A          190 EAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKELNLTWH---A--T--REDMY-----PVCDVVTLNCP  256 (393)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHHTCEEC---S--S--HHHHG-----GGCSEEEECSC
T ss_pred             CCCEEEEEeECHHHHHHHHHHHhCCC-EEEEEcCCccchhhHhhcCceec---C--C--HHHHH-----hcCCEEEEecC
Confidence            57899999999999999999999998 89999988766666666775421   0  1  22211     13577777665


Q ss_pred             Ch-H---HH-HHHHHHhcCCCcEEEEEc
Q 018072          275 NI-D---NM-ISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       275 ~~-~---~~-~~~~~~l~~~~G~iv~~g  297 (361)
                      .. +   .+ ...++.|+++ ..++.++
T Consensus       257 lt~~t~~li~~~~l~~mk~g-ailIN~a  283 (393)
T 2nac_A          257 LHPETEHMINDETLKLFKRG-AYIVNTA  283 (393)
T ss_dssp             CCTTTTTCBSHHHHTTSCTT-EEEEECS
T ss_pred             CchHHHHHhhHHHHhhCCCC-CEEEECC
Confidence            31 1   12 3445566665 6666665

>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}

Probab=95.60  E-value=0.064  Score=47.26  Aligned_cols=101  Identities=17%  Similarity=0.258  Sum_probs=69.2

Q ss_pred             hhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCC---EEEcCCCCCccHHHHHH
Q 018072          187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT---DFVNTSEHDRPIQEVIA  259 (361)
Q Consensus       187 ~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~---~vv~~~~~~~~~~~~i~  259 (361)
                      +.+...++++.+||-+|+|. |..+..+++..+. +|+++|.+++.++.+++    .|..   .++..+-.+  +     
T Consensus        53 l~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~--~-----  123 (273)
T 3bus_A           53 MIALLDVRSGDRVLDVGCGI-GKPAVRLATARDV-RVTGISISRPQVNQANARATAAGLANRVTFSYADAMD--L-----  123 (273)
T ss_dssp             HHHHSCCCTTCEEEEESCTT-SHHHHHHHHHSCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS--C-----
T ss_pred             HHHhcCCCCCCEEEEeCCCC-CHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECcccc--C-----
Confidence            45667788999999999976 7788888888777 99999999988877754    2432   122211111  0     


Q ss_pred             HHcCCCccEEEEcc-----C-ChHHHHHHHHHhcCCCcEEEEEc
Q 018072          260 EMTNGGVDRSVECT-----G-NIDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       260 ~~~~~g~Dvvid~~-----g-~~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      .+.++.||+|+..-     . ....+..+.+.|+++ |++++..
T Consensus       124 ~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~i~~  166 (273)
T 3bus_A          124 PFEDASFDAVWALESLHHMPDRGRALREMARVLRPG-GTVAIAD  166 (273)
T ss_dssp             CSCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEE-EEEEEEE
T ss_pred             CCCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCC-eEEEEEE
Confidence            01224799998532     2 234577888899997 9988764

>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X

Probab=95.59  E-value=0.083  Score=48.35  Aligned_cols=134  Identities=12%  Similarity=0.128  Sum_probs=82.1

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcC---CCeEEEEcCChhhHHH-HHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072          198 SVAVFGLGAVGLAAAEGARIAG---ASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  273 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g---~~~Vi~~~~~~~~~~~-~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~  273 (361)
                      ++.|+|+|.+|...+..++..+   .+-+.+.++++++.+. ++++|...++.    +  +.+.+.   +..+|+|+.++
T Consensus         4 rigiiG~G~ig~~~~~~l~~~~~~~~~l~av~d~~~~~a~~~a~~~~~~~~~~----~--~~~ll~---~~~vD~V~i~t   74 (334)
T 3ohs_X            4 RWGIVSVGLISSDFTAVLQTLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYG----S--YEELAK---DPNVEVAYVGT   74 (334)
T ss_dssp             EEEEECCSHHHHHHHHHHTTSCTTTEEEEEEECSSHHHHHHHHHHHTCSCEES----S--HHHHHH---CTTCCEEEECC
T ss_pred             EEEEECchHHHHHHHHHHHhCCCCCeEEEEEEcCCHHHHHHHHHHcCCCcccC----C--HHHHhc---CCCCCEEEECC
Confidence            6889999999988777666553   2234455778777554 45688754432    1  444432   23799999999


Q ss_pred             CChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecC-hhhhc--cccEEEEeeecCCCcCCcHHHHHHHHHcCCc
Q 018072          274 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKVI  344 (361)
Q Consensus       274 g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~-~~~~~--~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l  344 (361)
                      ......+.+..+|..  |+-|++-.+-....-... .....  +++.+.-.+..++  ...+.++.+++++|++
T Consensus        75 p~~~H~~~~~~al~~--GkhVl~EKP~a~~~~e~~~l~~~a~~~~~~~~v~~~~r~--~p~~~~~k~~i~~g~i  144 (334)
T 3ohs_X           75 QHPQHKAAVMLCLAA--GKAVLCEKPMGVNAAEVREMVTEARSRGLFLMEAIWTRF--FPASEALRSVLAQGTL  144 (334)
T ss_dssp             CGGGHHHHHHHHHHT--TCEEEEESSSSSSHHHHHHHHHHHHHTTCCEEEECGGGG--SHHHHHHHHHHHHTTT
T ss_pred             CcHHHHHHHHHHHhc--CCEEEEECCCCCCHHHHHHHHHHHHHhCCEEEEEEhHhc--CHHHHHHHHHHhcCCC
Confidence            987778888888886  676777543311111111 01111  4554433332232  3567888888988776

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=95.59  E-value=0.032  Score=49.17  Aligned_cols=98  Identities=15%  Similarity=0.049  Sum_probs=62.2

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCC-------------------EEEcCCCCC
Q 018072          192 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVT-------------------DFVNTSEHD  251 (361)
Q Consensus       192 ~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~-------------------~vv~~~~~~  251 (361)
                      ..+++.+||.+|+|. |..+..+|+. |. +|+++|.++.-++.+++ .+..                   .-+.+...+
T Consensus        65 ~~~~~~~vLD~GCG~-G~~~~~La~~-G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D  141 (252)
T 2gb4_A           65 KGQSGLRVFFPLCGK-AIEMKWFADR-GH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCS  141 (252)
T ss_dssp             TTCCSCEEEETTCTT-CTHHHHHHHT-TC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESC
T ss_pred             cCCCCCeEEEeCCCC-cHHHHHHHHC-CC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECc
Confidence            346789999999875 7777777765 88 99999999999988864 3310                   001111111


Q ss_pred             ccHHHHHHHHcC-CCccEEEEccC-----C---hHHHHHHHHHhcCCCcEEEEEc
Q 018072          252 RPIQEVIAEMTN-GGVDRSVECTG-----N---IDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       252 ~~~~~~i~~~~~-~g~Dvvid~~g-----~---~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                        +.+ + .... +.||+|++...     .   ...+..+.+.|+++ |+++++.
T Consensus       142 --~~~-l-~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpG-G~l~l~~  191 (252)
T 2gb4_A          142 --IFD-L-PRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKE-FQYLVAV  191 (252)
T ss_dssp             --TTT-G-GGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             --ccc-C-CcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCC-eEEEEEE
Confidence              100 0 0112 47999997432     1   12466788899997 9986543

>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}

Probab=95.58  E-value=0.047  Score=49.06  Aligned_cols=45  Identities=29%  Similarity=0.343  Sum_probs=37.6

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF  239 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~  239 (361)
                      .++.+||=+|+|. |..++.+++..+..+|+++|.++.-++.+++.
T Consensus        45 ~~~~~VLDiGCG~-G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~   89 (292)
T 3g07_A           45 FRGRDVLDLGCNV-GHLTLSIACKWGPSRMVGLDIDSRLIHSARQN   89 (292)
T ss_dssp             TTTSEEEEESCTT-CHHHHHHHHHTCCSEEEEEESCHHHHHHHHHT
T ss_pred             cCCCcEEEeCCCC-CHHHHHHHHHcCCCEEEEECCCHHHHHHHHHH
Confidence            4678999999875 78888899887656999999999988888763

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=95.58  E-value=0.036  Score=53.12  Aligned_cols=103  Identities=16%  Similarity=0.184  Sum_probs=68.1

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHc-CC--CeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEE
Q 018072          193 PERGSSVAVFGLGAVGLAAAEGARIA-GA--SRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRS  269 (361)
Q Consensus       193 ~~~g~~VlI~G~g~vG~~a~~~a~~~-g~--~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvv  269 (361)
                      ++...+|+|+|+|+||..++.++... +.  ..|+..+.++.+.+..+.+|.... ...-+.+++.+.+..+..++ |+|
T Consensus        10 ~~~~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g~~~~-~~~Vdadnv~~~l~aLl~~~-DvV   87 (480)
T 2ph5_A           10 ILFKNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGVSFK-LQQITPQNYLEVIGSTLEEN-DFL   87 (480)
T ss_dssp             BCCCSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHTCEEE-ECCCCTTTHHHHTGGGCCTT-CEE
T ss_pred             ecCCCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcCCcee-EEeccchhHHHHHHHHhcCC-CEE
Confidence            45556899999999999998876654 44  368888888776666666776433 22222222555666565554 999


Q ss_pred             EEccCChHHHHHHHHHhcCCCcEEEEEcC
Q 018072          270 VECTGNIDNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       270 id~~g~~~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      ++++-....+..+-.++..+ --++....
T Consensus        88 IN~s~~~~~l~Im~acleaG-v~YlDTa~  115 (480)
T 2ph5_A           88 IDVSIGISSLALIILCNQKG-ALYINAAT  115 (480)
T ss_dssp             EECCSSSCHHHHHHHHHHHT-CEEEESSC
T ss_pred             EECCccccCHHHHHHHHHcC-CCEEECCC
Confidence            99876655666666677764 55565553

>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*

Probab=95.58  E-value=0.072  Score=48.42  Aligned_cols=136  Identities=14%  Similarity=0.072  Sum_probs=83.1

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHH---HH--cCCCccEEE
Q 018072          197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIA---EM--TNGGVDRSV  270 (361)
Q Consensus       197 ~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~---~~--~~~g~Dvvi  270 (361)
                      -+|.|+|+ |.+|...+...+..+.+.+.+.++++++....+.++...++.  +    +.+.+.   .+  .+..+|+|+
T Consensus         4 irvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~~~~~~~~~~~~~~--~----~~~ll~~~~~l~~~~~~vD~V~   77 (312)
T 3o9z_A            4 TRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVGLVDSFFPEAEFFT--E----PEAFEAYLEDLRDRGEGVDYLS   77 (312)
T ss_dssp             CEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCCGGGGGTCTTCEEES--C----HHHHHHHHHHHHHTTCCCSEEE
T ss_pred             eEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHHhhCCCCceeC--C----HHHHHHHhhhhcccCCCCcEEE
Confidence            47899999 679998888888888755566677777644444444444432  1    333332   22  334899999


Q ss_pred             EccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecCh-hhhc--cccEEEEeeecCCCcCCcHHHHHHHHHcC
Q 018072          271 ECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNK  342 (361)
Q Consensus       271 d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~~--~~~~l~g~~~~~~~~~~~~~~~~~~~~~~  342 (361)
                      .++....-.+.+..+|..  |+=|++-.+-....-.... ....  +++.+.-.+..++  ...+.++-+++++|
T Consensus        78 I~tP~~~H~~~~~~al~a--GkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~R~--~p~~~~~k~~i~~g  148 (312)
T 3o9z_A           78 IASPNHLHYPQIRMALRL--GANALSEKPLVLWPEEIARLKELEARTGRRVYTVLQLRV--HPSLLALKERLGQE  148 (312)
T ss_dssp             ECSCGGGHHHHHHHHHHT--TCEEEECSSSCSCHHHHHHHHHHHHHHCCCEEECCGGGG--CHHHHHHHHHHHTC
T ss_pred             ECCCchhhHHHHHHHHHC--CCeEEEECCCCCCHHHHHHHHHHHHHcCCEEEEEeehhc--CHHHHHHHHHHHcC
Confidence            999987788888888886  6777775433111111111 1111  4554433332232  46778888888887

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=95.58  E-value=0.048  Score=49.87  Aligned_cols=90  Identities=12%  Similarity=0.178  Sum_probs=60.9

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEc
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR-SSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  272 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~-~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~  272 (361)
                      -.|.+|.|+|.|.+|...++.++..|. +|+++++ +.++ +.+.++|+..    .. +  +.+.+.     ..|+|+.+
T Consensus       144 l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~~g~~~----~~-~--l~ell~-----~aDvVil~  209 (320)
T 1gdh_A          144 LDNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRASS-SDEASYQATF----HD-S--LDSLLS-----VSQFFSLN  209 (320)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCCH-HHHHHHTCEE----CS-S--HHHHHH-----HCSEEEEC
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcCh-hhhhhcCcEE----cC-C--HHHHHh-----hCCEEEEe
Confidence            367899999999999999999999998 9999998 7766 3555667632    11 1  333322     36788877


Q ss_pred             cCChH----HH-HHHHHHhcCCCcEEEEEcC
Q 018072          273 TGNID----NM-ISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       273 ~g~~~----~~-~~~~~~l~~~~G~iv~~g~  298 (361)
                      +....    .+ ...++.|+++ ..++.++.
T Consensus       210 ~p~~~~t~~~i~~~~l~~mk~g-ailIn~ar  239 (320)
T 1gdh_A          210 APSTPETRYFFNKATIKSLPQG-AIVVNTAR  239 (320)
T ss_dssp             CCCCTTTTTCBSHHHHTTSCTT-EEEEECSC
T ss_pred             ccCchHHHhhcCHHHHhhCCCC-cEEEECCC
Confidence            76421    12 3455667775 66666654

>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*

Probab=95.58  E-value=0.02  Score=52.41  Aligned_cols=99  Identities=15%  Similarity=0.113  Sum_probs=65.1

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC-------EEEcCCCCCccHHHHHHHHcCCCc
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-------DFVNTSEHDRPIQEVIAEMTNGGV  266 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~-------~vv~~~~~~~~~~~~i~~~~~~g~  266 (361)
                      .++.+||.+|+|. |..+..+++..+..+|+++|.+++..+.+++.-..       .-+.....|  ..+.+.. .++.|
T Consensus       115 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D--~~~~l~~-~~~~f  190 (321)
T 2pt6_A          115 KEPKNVLVVGGGD-GGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIED--ASKFLEN-VTNTY  190 (321)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESC--HHHHHHH-CCSCE
T ss_pred             CCCCEEEEEcCCc-cHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEcc--HHHHHhh-cCCCc
Confidence            4568999998865 66667777765555999999999999988763211       001111122  3333332 23479


Q ss_pred             cEEEEccCC----------hHHHHHHHHHhcCCCcEEEEEc
Q 018072          267 DRSVECTGN----------IDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       267 Dvvid~~g~----------~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      |+|+.....          .+.++.+.+.|+++ |.++...
T Consensus       191 DvIi~d~~~p~~~~~~l~~~~~l~~~~~~Lkpg-G~lv~~~  230 (321)
T 2pt6_A          191 DVIIVDSSDPIGPAETLFNQNFYEKIYNALKPN-GYCVAQC  230 (321)
T ss_dssp             EEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             eEEEECCcCCCCcchhhhHHHHHHHHHHhcCCC-cEEEEEc
Confidence            999954321          46678889999997 9988754

>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}

Probab=95.57  E-value=0.099  Score=48.55  Aligned_cols=132  Identities=17%  Similarity=0.202  Sum_probs=79.4

Q ss_pred             CEEEEEcCCHHHHH-HHHHHHHc-CCCeEE-EEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072          197 SSVAVFGLGAVGLA-AAEGARIA-GASRII-GVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  273 (361)
Q Consensus       197 ~~VlI~G~g~vG~~-a~~~a~~~-g~~~Vi-~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~  273 (361)
                      -+|.|+|+|.+|.. .+..++.. ++ +++ +.++++++.+  ++++...++.  +    +.+.+   .+..+|+|+.++
T Consensus         8 ~rvgiiG~G~~g~~~~~~~l~~~~~~-~l~av~d~~~~~~~--~~~~~~~~~~--~----~~~ll---~~~~~D~V~i~t   75 (364)
T 3e82_A            8 INIALIGYGFVGKTFHAPLIRSVPGL-NLAFVASRDEEKVK--RDLPDVTVIA--S----PEAAV---QHPDVDLVVIAS   75 (364)
T ss_dssp             EEEEEECCSHHHHHTHHHHHHTSTTE-EEEEEECSCHHHHH--HHCTTSEEES--C----HHHHH---TCTTCSEEEECS
T ss_pred             ceEEEECCCHHHHHHHHHHHhhCCCe-EEEEEEcCCHHHHH--hhCCCCcEEC--C----HHHHh---cCCCCCEEEEeC
Confidence            37899999999984 66666555 56 554 5677777654  4454434331  1    43333   223799999999


Q ss_pred             CChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecCh-hhhc--cccEEEEeeecCCCcCCcHHHHHHHHHcCCc
Q 018072          274 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKVI  344 (361)
Q Consensus       274 g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~~--~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l  344 (361)
                      ......+.+..+|..  |+-+++..+-....-.... ....  +++.+.-.+..++  ...+.++.+++++|+|
T Consensus        76 p~~~H~~~~~~al~a--Gk~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~v~~~~r~--~p~~~~~~~~i~~g~i  145 (364)
T 3e82_A           76 PNATHAPLARLALNA--GKHVVVDKPFTLDMQEARELIALAEEKQRLLSVFHNRRW--DSDYLGIRQVIEQGTL  145 (364)
T ss_dssp             CGGGHHHHHHHHHHT--TCEEEECSCSCSSHHHHHHHHHHHHHTTCCEEECCCCTT--CHHHHHHHHHHHHTTT
T ss_pred             ChHHHHHHHHHHHHC--CCcEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEeeccc--CHHHHHHHHHHHcCCC
Confidence            987778888888886  6777775432111111110 1111  4555433322222  3567888899988876

>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}

Probab=95.57  E-value=0.05  Score=49.81  Aligned_cols=134  Identities=13%  Similarity=0.037  Sum_probs=82.4

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHc-CCCeEE-EEcCChhhHHH-HHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072          197 SSVAVFGLGAVGLAAAEGARIA-GASRII-GVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  273 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~-g~~~Vi-~~~~~~~~~~~-~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~  273 (361)
                      -+|.|+|+|.+|...+..++.. +. .++ +.++++++.+. ++++|...++    .+  +.+.+.   +..+|+|+.++
T Consensus         6 ~~igiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~~~~~~~~~~~----~~--~~~ll~---~~~~D~V~i~t   75 (330)
T 3e9m_A            6 IRYGIMSTAQIVPRFVAGLRESAQA-EVRGIASRRLENAQKMAKELAIPVAY----GS--YEELCK---DETIDIIYIPT   75 (330)
T ss_dssp             EEEEECSCCTTHHHHHHHHHHSSSE-EEEEEBCSSSHHHHHHHHHTTCCCCB----SS--HHHHHH---CTTCSEEEECC
T ss_pred             EEEEEECchHHHHHHHHHHHhCCCc-EEEEEEeCCHHHHHHHHHHcCCCcee----CC--HHHHhc---CCCCCEEEEcC
Confidence            3789999999998888777765 55 555 55788777655 4557764222    11  443332   23799999999


Q ss_pred             CChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecCh-hhhc--cccEEEEeeecCCCcCCcHHHHHHHHHcCCc
Q 018072          274 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKVI  344 (361)
Q Consensus       274 g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~~--~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l  344 (361)
                      ......+.+..++..  |+-+++..+-....-.... ....  +++.+.-.+..++  ...+.++.+++++|+|
T Consensus        76 p~~~h~~~~~~al~~--gk~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~r~--~p~~~~~k~~i~~g~i  145 (330)
T 3e9m_A           76 YNQGHYSAAKLALSQ--GKPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEAQKSVF--LPITQKVKATIQEGGL  145 (330)
T ss_dssp             CGGGHHHHHHHHHHT--TCCEEECSSCCSSHHHHHHHHHHHHHTTCCEEECCSGGG--CHHHHHHHHHHHTTTT
T ss_pred             CCHHHHHHHHHHHHC--CCeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEEhhhh--CHHHHHHHHHHhCCCC
Confidence            987778888888876  5656665432111111110 1111  4555433333332  4677888899998876

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=95.57  E-value=0.04  Score=49.20  Aligned_cols=80  Identities=20%  Similarity=0.241  Sum_probs=50.4

Q ss_pred             CCCEEEEEcC---CHHHHHHHHHHHHcCCCeEEEEcCChh---hHHHHHH-cCCCEEEcCCCCC-ccHHHHHHHHc--CC
Q 018072          195 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSSK---RFEEAKK-FGVTDFVNTSEHD-RPIQEVIAEMT--NG  264 (361)
Q Consensus       195 ~g~~VlI~G~---g~vG~~a~~~a~~~g~~~Vi~~~~~~~---~~~~~~~-~G~~~vv~~~~~~-~~~~~~i~~~~--~~  264 (361)
                      .|.++||+|+   |++|...++.+...|+ +|++++++++   ..+.+.+ .+....+..+-.+ ..+.+.+....  -+
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   98 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGA-QLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWG   98 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4678999986   6999999998888898 8999988875   3333322 3432233222222 12333333322  13


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      ++|++|+++|.
T Consensus        99 ~iD~lv~~Ag~  109 (285)
T 2p91_A           99 SLDIIVHSIAY  109 (285)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=95.57  E-value=0.03  Score=47.00  Aligned_cols=62  Identities=29%  Similarity=0.438  Sum_probs=43.3

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072          198 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       198 ~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      ++||+|+ |++|...++.+. .|. +|++++++++          ....|..+.+ .+.+.+..+  +++|++|+++|
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~-~V~~~~r~~~----------~~~~D~~~~~-~~~~~~~~~--~~~d~vi~~ag   67 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKA-EVITAGRHSG----------DVTVDITNID-SIKKMYEQV--GKVDAIVSATG   67 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTS-EEEEEESSSS----------SEECCTTCHH-HHHHHHHHH--CCEEEEEECCC
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCC-eEEEEecCcc----------ceeeecCCHH-HHHHHHHHh--CCCCEEEECCC
Confidence            7999988 999999998887 898 8999988765          1223333221 233334333  46899999987

>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*

Probab=95.57  E-value=0.099  Score=49.35  Aligned_cols=111  Identities=13%  Similarity=0.137  Sum_probs=70.7

Q ss_pred             hhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-----------cCC--CEE--Ec
Q 018072          182 TGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----------FGV--TDF--VN  246 (361)
Q Consensus       182 ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-----------~G~--~~v--v~  246 (361)
                      ..+..+++...++++++||=+|+|. |..++++|+..|..+|+++|.+++-.+.+++           +|.  ..+  +.
T Consensus       160 ~~i~~il~~l~l~~gd~VLDLGCGt-G~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~  238 (438)
T 3uwp_A          160 DLVAQMIDEIKMTDDDLFVDLGSGV-GQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLER  238 (438)
T ss_dssp             HHHHHHHHHHCCCTTCEEEEESCTT-SHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEE
T ss_pred             HHHHHHHHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEE
Confidence            3344456778899999999999875 7888888888888679999999865555532           343  222  22


Q ss_pred             CCCCCccHHHHHHHHcCCCccEEEEccC--Ch---HHHHHHHHHhcCCCcEEEEEcCC
Q 018072          247 TSEHDRPIQEVIAEMTNGGVDRSVECTG--NI---DNMISAFECVHDGWGVAVLVGVP  299 (361)
Q Consensus       247 ~~~~~~~~~~~i~~~~~~g~Dvvid~~g--~~---~~~~~~~~~l~~~~G~iv~~g~~  299 (361)
                      -+-.+..+.+   .+  ..+|+|+-..-  .+   ..+....+.|+++ |+++..-..
T Consensus       239 GD~~~lp~~d---~~--~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPG-GrIVssE~f  290 (438)
T 3uwp_A          239 GDFLSEEWRE---RI--ANTSVIFVNNFAFGPEVDHQLKERFANMKEG-GRIVSSKPF  290 (438)
T ss_dssp             CCTTSHHHHH---HH--HTCSEEEECCTTCCHHHHHHHHHHHTTSCTT-CEEEESSCS
T ss_pred             CcccCCcccc---cc--CCccEEEEcccccCchHHHHHHHHHHcCCCC-cEEEEeecc
Confidence            1211211111   11  15899985321  22   2455667789997 999987543

>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*

Probab=95.56  E-value=0.027  Score=49.92  Aligned_cols=97  Identities=21%  Similarity=0.256  Sum_probs=64.5

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHc---CCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcCCC
Q 018072          193 PERGSSVAVFGLGAVGLAAAEGARIA---GASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGG  265 (361)
Q Consensus       193 ~~~g~~VlI~G~g~vG~~a~~~a~~~---g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~~g  265 (361)
                      +++|.+||=+|+|. |..+..+++..   |+ +|+++|.+++-++.+++    .+...-+.....+  +    ..+..+.
T Consensus        68 ~~~~~~vLDlGcGt-G~~~~~la~~~~~~~~-~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D--~----~~~~~~~  139 (261)
T 4gek_A           68 VQPGTQVYDLGCSL-GAATLSVRRNIHHDNC-KIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGD--I----RDIAIEN  139 (261)
T ss_dssp             CCTTCEEEEETCTT-THHHHHHHHTCCSSSC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESC--T----TTCCCCS
T ss_pred             CCCCCEEEEEeCCC-CHHHHHHHHhcCCCCC-EEEEEECCHHHHHHHHHHHHhhccCceEEEeecc--c----ccccccc
Confidence            78999999999975 77777888765   45 89999999998887765    3432211111111  1    1122236


Q ss_pred             ccEEEEccC-----C---hHHHHHHHHHhcCCCcEEEEEcC
Q 018072          266 VDRSVECTG-----N---IDNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       266 ~Dvvid~~g-----~---~~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      +|+|+-...     .   ...+....+.|+|+ |++++.-.
T Consensus       140 ~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpG-G~lii~e~  179 (261)
T 4gek_A          140 ASMVVLNFTLQFLEPSERQALLDKIYQGLNPG-GALVLSEK  179 (261)
T ss_dssp             EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             cccceeeeeeeecCchhHhHHHHHHHHHcCCC-cEEEEEec
Confidence            888876432     1   13577888999997 99987643

>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}

Probab=95.56  E-value=0.022  Score=49.26  Aligned_cols=104  Identities=17%  Similarity=0.224  Sum_probs=67.2

Q ss_pred             hhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCc
Q 018072          187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGV  266 (361)
Q Consensus       187 ~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~  266 (361)
                      +.......++.+||-+|+|. |..+..+++. |..+|+++|.+++.++.+++.....-+.....+  +.+.  .+.++.+
T Consensus        35 l~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d--~~~~--~~~~~~f  108 (243)
T 3bkw_A           35 LRAMLPEVGGLRIVDLGCGF-GWFCRWAHEH-GASYVLGLDLSEKMLARARAAGPDTGITYERAD--LDKL--HLPQDSF  108 (243)
T ss_dssp             HHHHSCCCTTCEEEEETCTT-CHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCSSSEEEEECC--GGGC--CCCTTCE
T ss_pred             HHHhccccCCCEEEEEcCcC-CHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhcccCCceEEEcC--hhhc--cCCCCCc
Confidence            34455667889999999875 6666667665 555899999999999999875432101111111  1000  0123379


Q ss_pred             cEEEEccC------ChHHHHHHHHHhcCCCcEEEEEc
Q 018072          267 DRSVECTG------NIDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       267 Dvvid~~g------~~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      |+|+....      ....+..+.+.|+++ |++++.-
T Consensus       109 D~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~~~~  144 (243)
T 3bkw_A          109 DLAYSSLALHYVEDVARLFRTVHQALSPG-GHFVFST  144 (243)
T ss_dssp             EEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             eEEEEeccccccchHHHHHHHHHHhcCcC-cEEEEEe
Confidence            99997532      134677888999997 9988753

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=95.56  E-value=0.062  Score=52.12  Aligned_cols=84  Identities=19%  Similarity=0.229  Sum_probs=54.9

Q ss_pred             CCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhh-------HHHHHHcCCCEE-EcCCCCC-ccHHHHHHHH
Q 018072          192 KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR-------FEEAKKFGVTDF-VNTSEHD-RPIQEVIAEM  261 (361)
Q Consensus       192 ~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~-------~~~~~~~G~~~v-v~~~~~~-~~~~~~i~~~  261 (361)
                      .++++.++||+|+ |++|...++.+...|+.+|+.++++...       .+.+++.|.... +.-+-.+ ..+.+.+...
T Consensus       222 ~~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i  301 (486)
T 2fr1_A          222 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI  301 (486)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             CcCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH
Confidence            3578899999987 9999998888878898668888887641       233445666432 2222222 2234444443


Q ss_pred             cC-CCccEEEEccCC
Q 018072          262 TN-GGVDRSVECTGN  275 (361)
Q Consensus       262 ~~-~g~Dvvid~~g~  275 (361)
                      .. +.+|.||++.|.
T Consensus       302 ~~~g~ld~VIh~AG~  316 (486)
T 2fr1_A          302 GDDVPLSAVFHAAAT  316 (486)
T ss_dssp             CTTSCEEEEEECCCC
T ss_pred             HhcCCCcEEEECCcc
Confidence            22 268999999883

>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=95.53  E-value=0.011  Score=51.39  Aligned_cols=99  Identities=15%  Similarity=0.183  Sum_probs=63.9

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCC---CEEEcCCCCCccHHHHHHHHcCCCccEE
Q 018072          193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV---TDFVNTSEHDRPIQEVIAEMTNGGVDRS  269 (361)
Q Consensus       193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~---~~vv~~~~~~~~~~~~i~~~~~~g~Dvv  269 (361)
                      .+++.+||=+|+|. |..+..+++. +..+|+++|.+++.++.+++...   ..+ .....+  +.+.+..+.++.||+|
T Consensus        58 ~~~~~~vLDiGcGt-G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~v-~~~~~d--~~~~~~~~~~~~fD~V  132 (236)
T 1zx0_A           58 SSKGGRVLEVGFGM-AIAASKVQEA-PIDEHWIIECNDGVFQRLRDWAPRQTHKV-IPLKGL--WEDVAPTLPDGHFDGI  132 (236)
T ss_dssp             TTTCEEEEEECCTT-SHHHHHHHTS-CEEEEEEEECCHHHHHHHHHHGGGCSSEE-EEEESC--HHHHGGGSCTTCEEEE
T ss_pred             CCCCCeEEEEeccC-CHHHHHHHhc-CCCeEEEEcCCHHHHHHHHHHHHhcCCCe-EEEecC--HHHhhcccCCCceEEE
Confidence            56889999999874 6666666543 33489999999999888876321   121 112222  3332223334579999


Q ss_pred             EE-ccC----Ch------HHHHHHHHHhcCCCcEEEEEc
Q 018072          270 VE-CTG----NI------DNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       270 id-~~g----~~------~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      +. +..    ..      ..+..+.+.|+++ |+++++.
T Consensus       133 ~~d~~~~~~~~~~~~~~~~~l~~~~r~Lkpg-G~l~~~~  170 (236)
T 1zx0_A          133 LYDTYPLSEETWHTHQFNFIKNHAFRLLKPG-GVLTYCN  170 (236)
T ss_dssp             EECCCCCBGGGTTTHHHHHHHHTHHHHEEEE-EEEEECC
T ss_pred             EECCcccchhhhhhhhHHHHHHHHHHhcCCC-eEEEEEe
Confidence            87 221    11      2367888999997 9988764

>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A

Probab=95.53  E-value=0.036  Score=52.86  Aligned_cols=103  Identities=14%  Similarity=0.229  Sum_probs=69.3

Q ss_pred             hhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCE-EEcCCCCCccHHHHHHHHcC
Q 018072          189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FVNTSEHDRPIQEVIAEMTN  263 (361)
Q Consensus       189 ~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~-vv~~~~~~~~~~~~i~~~~~  263 (361)
                      ....+++|++||=+|+|+ |..+.+++...+..+|+++|.++.+++.+++    +|... ++..+..+  +.+   .+.+
T Consensus       240 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~--~~~---~~~~  313 (429)
T 1sqg_A          240 TWLAPQNGEHILDLCAAP-GGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRY--PSQ---WCGE  313 (429)
T ss_dssp             HHHCCCTTCEEEEESCTT-CHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTC--THH---HHTT
T ss_pred             HHcCCCCcCeEEEECCCc-hHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhh--chh---hccc
Confidence            345678999999999877 7777788887753499999999998888754    46532 22222221  211   1233


Q ss_pred             CCccEEEE---ccCC-------------------------hHHHHHHHHHhcCCCcEEEEEcC
Q 018072          264 GGVDRSVE---CTGN-------------------------IDNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       264 ~g~Dvvid---~~g~-------------------------~~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      +.||+|+-   |+|.                         ...+..+.+.|+++ |+++....
T Consensus       314 ~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpG-G~lvystc  375 (429)
T 1sqg_A          314 QQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTG-GTLVYATC  375 (429)
T ss_dssp             CCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEE-EEEEEEES
T ss_pred             CCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEEC
Confidence            47999986   4332                         14567788889997 99887653

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=95.53  E-value=0.067  Score=51.98  Aligned_cols=83  Identities=20%  Similarity=0.270  Sum_probs=54.5

Q ss_pred             CCCC--CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChh-------hHHHHHHcCCCEEEc-CCCCC-ccHHHHHHH
Q 018072          193 PERG--SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK-------RFEEAKKFGVTDFVN-TSEHD-RPIQEVIAE  260 (361)
Q Consensus       193 ~~~g--~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~-------~~~~~~~~G~~~vv~-~~~~~-~~~~~~i~~  260 (361)
                      ++++  .++||+|+ |++|...++.+...|+.+|+.+.++..       ..+.+++.|....+. -+-.+ ..+.+.+..
T Consensus       234 ~~~~~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~  313 (496)
T 3mje_A          234 KRPPVHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAE  313 (496)
T ss_dssp             CCCCCCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred             CCCCCCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence            3455  89999987 999999998888889878888877531       233445567654332 22222 224444444


Q ss_pred             HcCC-CccEEEEccCC
Q 018072          261 MTNG-GVDRSVECTGN  275 (361)
Q Consensus       261 ~~~~-g~Dvvid~~g~  275 (361)
                      .... ++|++|++.|.
T Consensus       314 i~~~g~ld~vVh~AGv  329 (496)
T 3mje_A          314 LPEDAPLTAVFHSAGV  329 (496)
T ss_dssp             CCTTSCEEEEEECCCC
T ss_pred             HHHhCCCeEEEECCcc
Confidence            3333 79999999885

>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}

Probab=95.51  E-value=0.075  Score=45.37  Aligned_cols=95  Identities=18%  Similarity=0.248  Sum_probs=64.7

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC-----------EEEcCCCCCccHHHHHHHH
Q 018072          193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-----------DFVNTSEHDRPIQEVIAEM  261 (361)
Q Consensus       193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~-----------~vv~~~~~~~~~~~~i~~~  261 (361)
                      ++++.+||-+|+|. |..+..+++. +. +|+++|.+++.++.+++....           .++..+..+  +     .+
T Consensus        28 ~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~--~-----~~   97 (235)
T 3sm3_A           28 LQEDDEILDIGCGS-GKISLELASK-GY-SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASS--L-----SF   97 (235)
T ss_dssp             CCTTCEEEEETCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTS--C-----CS
T ss_pred             CCCCCeEEEECCCC-CHHHHHHHhC-CC-eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccc--c-----CC
Confidence            56889999999875 7777777776 77 999999999998888773221           122111111  0     01


Q ss_pred             cCCCccEEEEcc-----CCh----HHHHHHHHHhcCCCcEEEEEcC
Q 018072          262 TNGGVDRSVECT-----GNI----DNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       262 ~~~g~Dvvid~~-----g~~----~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      .++.+|+|+-..     ..+    ..+..+.+.|+++ |++++...
T Consensus        98 ~~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pg-G~l~~~~~  142 (235)
T 3sm3_A           98 HDSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPG-AYLYLVEF  142 (235)
T ss_dssp             CTTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             CCCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCC-eEEEEEEC
Confidence            234799999642     122    4678888999997 99988754

>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}

Probab=95.51  E-value=0.024  Score=50.31  Aligned_cols=100  Identities=15%  Similarity=0.134  Sum_probs=65.0

Q ss_pred             hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCE--EEcCCCCCccHHHHHHHHcCCC
Q 018072          188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--FVNTSEHDRPIQEVIAEMTNGG  265 (361)
Q Consensus       188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~--vv~~~~~~~~~~~~i~~~~~~g  265 (361)
                      .....++++.+||=+|+|. |..+..+++. |. +|+++|.+++-++.+++.-...  ..+..+.+..    .....++.
T Consensus        38 l~~l~l~~g~~VLDlGcGt-G~~a~~La~~-g~-~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~----~~~~~~~~  110 (261)
T 3iv6_A           38 IFLENIVPGSTVAVIGAST-RFLIEKALER-GA-SVTVFDFSQRMCDDLAEALADRCVTIDLLDITAE----IPKELAGH  110 (261)
T ss_dssp             HHTTTCCTTCEEEEECTTC-HHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSC----CCGGGTTC
T ss_pred             HHhcCCCCcCEEEEEeCcc-hHHHHHHHhc-CC-EEEEEECCHHHHHHHHHHHHhccceeeeeecccc----cccccCCC
Confidence            4556789999999999975 7788888765 66 9999999999999987643221  1111111100    00011347


Q ss_pred             ccEEEEccC----C----hHHHHHHHHHhcCCCcEEEEE
Q 018072          266 VDRSVECTG----N----IDNMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       266 ~Dvvid~~g----~----~~~~~~~~~~l~~~~G~iv~~  296 (361)
                      ||+|+.+..    .    ...+....+.+ ++ |++++.
T Consensus       111 fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PG-G~l~lS  147 (261)
T 3iv6_A          111 FDFVLNDRLINRFTTEEARRACLGMLSLV-GS-GTVRAS  147 (261)
T ss_dssp             CSEEEEESCGGGSCHHHHHHHHHHHHHHH-TT-SEEEEE
T ss_pred             ccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cC-cEEEEE
Confidence            999997532    1    12466677788 87 998754

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=95.51  E-value=0.094  Score=47.09  Aligned_cols=87  Identities=20%  Similarity=0.207  Sum_probs=60.1

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 018072          197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  276 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~  276 (361)
                      .+|.|+|+|.+|...+..+...|. +|+++++++++.+.+.+.|...   ..  +  ..+.+.     ..|+||.++..+
T Consensus         5 ~~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~~--~--~~~~~~-----~~D~vi~~vp~~   71 (301)
T 3cky_A            5 IKIGFIGLGAMGKPMAINLLKEGV-TVYAFDLMEANVAAVVAQGAQA---CE--N--NQKVAA-----ASDIIFTSLPNA   71 (301)
T ss_dssp             CEEEEECCCTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHTTTCEE---CS--S--HHHHHH-----HCSEEEECCSSH
T ss_pred             CEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCee---cC--C--HHHHHh-----CCCEEEEECCCH
Confidence            479999999999998888888888 8999999999888877666431   11  1  333332     379999999775


Q ss_pred             HHHHHHH-------HHhcCCCcEEEEEc
Q 018072          277 DNMISAF-------ECVHDGWGVAVLVG  297 (361)
Q Consensus       277 ~~~~~~~-------~~l~~~~G~iv~~g  297 (361)
                      ..++..+       ..++++ ..++.++
T Consensus        72 ~~~~~v~~~~~~l~~~l~~~-~~vv~~~   98 (301)
T 3cky_A           72 GIVETVMNGPGGVLSACKAG-TVIVDMS   98 (301)
T ss_dssp             HHHHHHHHSTTCHHHHSCTT-CEEEECC
T ss_pred             HHHHHHHcCcchHhhcCCCC-CEEEECC
Confidence            5555444       345554 4555543

>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}

Probab=95.51  E-value=0.055  Score=49.51  Aligned_cols=135  Identities=16%  Similarity=0.127  Sum_probs=79.8

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHc-CCCeEEEEcCChhhHHH-HHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072          197 SSVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~-g~~~Vi~~~~~~~~~~~-~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      -+|.|+|+|.+|...+..++.. +.+.+.+.++++++.+. ++++|....+.    +  +.+.+   .+..+|+|+.++.
T Consensus         6 ~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~~~a~~~~~~~~~~----~--~~~ll---~~~~~D~V~i~tp   76 (329)
T 3evn_A            6 VRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQAFANKYHLPKAYD----K--LEDML---ADESIDVIYVATI   76 (329)
T ss_dssp             EEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTCC---CCCCSCEES----C--HHHHH---TCTTCCEEEECSC
T ss_pred             eEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHHcCCCcccC----C--HHHHh---cCCCCCEEEECCC
Confidence            3789999999998777666555 44233455787776544 44566643331    1  33333   2237999999999


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecC-hhhhc--cccEEEEeeecCCCcCCcHHHHHHHHHcCCc
Q 018072          275 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKVI  344 (361)
Q Consensus       275 ~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~-~~~~~--~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l  344 (361)
                      .....+.+..+|..  |+-+++..+-....-... .....  +++.+.-.+..++  ...+..+.+++++|++
T Consensus        77 ~~~h~~~~~~al~a--Gk~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~v~~~~r~--~p~~~~~~~~i~~g~i  145 (329)
T 3evn_A           77 NQDHYKVAKAALLA--GKHVLVEKPFTLTYDQANELFALAESCNLFLMEAQKSVF--IPMTQVIKKLLASGEI  145 (329)
T ss_dssp             GGGHHHHHHHHHHT--TCEEEEESSCCSSHHHHHHHHHHHHHTTCCEEEECSSCS--SHHHHHHHHHHHTTTT
T ss_pred             cHHHHHHHHHHHHC--CCeEEEccCCcCCHHHHHHHHHHHHHcCCEEEEEEcccC--CHHHHHHHHHHhCCCC
Confidence            87778888888876  666777543311111111 01111  4555433332222  3567888899998876

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=95.50  E-value=0.033  Score=49.70  Aligned_cols=77  Identities=21%  Similarity=0.298  Sum_probs=56.3

Q ss_pred             CCCCEEEEEcCC-HHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEc
Q 018072          194 ERGSSVAVFGLG-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  272 (361)
Q Consensus       194 ~~g~~VlI~G~g-~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~  272 (361)
                      -.|.+++|+|.| .+|..+++++...|+ +|+...+...                   +  +.+.+     ..+|+||.+
T Consensus       159 l~Gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~hs~t~-------------------~--L~~~~-----~~ADIVI~A  211 (285)
T 3l07_A          159 TEGAYAVVVGASNVVGKPVSQLLLNAKA-TVTTCHRFTT-------------------D--LKSHT-----TKADILIVA  211 (285)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTCS-------------------S--HHHHH-----TTCSEEEEC
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCch-------------------h--HHHhc-----ccCCEEEEC
Confidence            478999999985 589999999999999 8888754321                   1  33222     248999999


Q ss_pred             cCChHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072          273 TGNIDNMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       273 ~g~~~~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      +|.+..+..  +.++++ ..++.+|...
T Consensus       212 vg~p~~I~~--~~vk~G-avVIDvgi~~  236 (285)
T 3l07_A          212 VGKPNFITA--DMVKEG-AVVIDVGINH  236 (285)
T ss_dssp             CCCTTCBCG--GGSCTT-CEEEECCCEE
T ss_pred             CCCCCCCCH--HHcCCC-cEEEEecccC
Confidence            998765443  457876 7888888643

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=95.50  E-value=0.052  Score=47.93  Aligned_cols=78  Identities=9%  Similarity=0.103  Sum_probs=53.6

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 018072          197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  275 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~  275 (361)
                      -+|.|+|+|.+|...++.+...|.+.|.++++++++.+.+.+ +|.... .  +    +.    +.. ...|+||.++..
T Consensus        11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~-~--~----~~----~~~-~~~Dvvi~av~~   78 (266)
T 3d1l_A           11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYT-T--D----LA----EVN-PYAKLYIVSLKD   78 (266)
T ss_dssp             CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEE-S--C----GG----GSC-SCCSEEEECCCH
T ss_pred             CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCcee-C--C----HH----HHh-cCCCEEEEecCH
Confidence            479999999999998888777788448899999988877655 475421 1  1    10    011 258999999987


Q ss_pred             hHHHHHHHHHhc
Q 018072          276 IDNMISAFECVH  287 (361)
Q Consensus       276 ~~~~~~~~~~l~  287 (361)
                      . .....++.+.
T Consensus        79 ~-~~~~v~~~l~   89 (266)
T 3d1l_A           79 S-AFAELLQGIV   89 (266)
T ss_dssp             H-HHHHHHHHHH
T ss_pred             H-HHHHHHHHHH
Confidence            5 3455554443

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=95.49  E-value=0.034  Score=49.62  Aligned_cols=77  Identities=22%  Similarity=0.268  Sum_probs=56.8

Q ss_pred             CCCCEEEEEcCC-HHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEc
Q 018072          194 ERGSSVAVFGLG-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  272 (361)
Q Consensus       194 ~~g~~VlI~G~g-~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~  272 (361)
                      -.|.+++|+|.| .+|..+++++...|+ +|+.+.+..+.                     +.+.+     ..+|+||.+
T Consensus       158 l~Gk~vvVvGrs~iVG~p~A~lL~~~gA-tVtv~h~~t~~---------------------L~~~~-----~~ADIVI~A  210 (285)
T 3p2o_A          158 LEGKDAVIIGASNIVGRPMATMLLNAGA-TVSVCHIKTKD---------------------LSLYT-----RQADLIIVA  210 (285)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTCSC---------------------HHHHH-----TTCSEEEEC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCchh---------------------HHHHh-----hcCCEEEEC
Confidence            478999999985 589999999999999 88888543211                     32222     248999999


Q ss_pred             cCChHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072          273 TGNIDNMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       273 ~g~~~~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      +|.+..+..  +.++++ ..++.+|...
T Consensus       211 vg~p~~I~~--~~vk~G-avVIDVgi~~  235 (285)
T 3p2o_A          211 AGCVNLLRS--DMVKEG-VIVVDVGINR  235 (285)
T ss_dssp             SSCTTCBCG--GGSCTT-EEEEECCCEE
T ss_pred             CCCCCcCCH--HHcCCC-eEEEEeccCc
Confidence            998766543  457876 7888888643

>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5

Probab=95.48  E-value=0.039  Score=50.38  Aligned_cols=132  Identities=14%  Similarity=0.121  Sum_probs=77.7

Q ss_pred             EEEEEcCCHHHH-HHHHHHHHc-CCCeEEEEcCChhhHHHH-HHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072          198 SVAVFGLGAVGL-AAAEGARIA-GASRIIGVDRSSKRFEEA-KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       198 ~VlI~G~g~vG~-~a~~~a~~~-g~~~Vi~~~~~~~~~~~~-~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      +|.|+|+|.+|. ..+..++.. +. ++++.++++++.+.+ +++|....  +.+..    +.   + ...+|+|+.++.
T Consensus         4 ~igiIG~G~ig~~~~~~~l~~~~~~-~l~v~d~~~~~~~~~a~~~g~~~~--~~~~~----~~---l-~~~~D~V~i~tp   72 (323)
T 1xea_A            4 KIAMIGLGDIAQKAYLPVLAQWPDI-ELVLCTRNPKVLGTLATRYRVSAT--CTDYR----DV---L-QYGVDAVMIHAA   72 (323)
T ss_dssp             EEEEECCCHHHHHTHHHHHTTSTTE-EEEEECSCHHHHHHHHHHTTCCCC--CSSTT----GG---G-GGCCSEEEECSC
T ss_pred             EEEEECCCHHHHHHHHHHHHhCCCc-eEEEEeCCHHHHHHHHHHcCCCcc--ccCHH----HH---h-hcCCCEEEEECC
Confidence            688999999997 466655444 55 555888998887654 55776431  11111    11   2 236999999999


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecC-hhhhc--cccEEEEeeecCCCcCCcHHHHHHHHHcCCc
Q 018072          275 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKVI  344 (361)
Q Consensus       275 ~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~-~~~~~--~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l  344 (361)
                      .....+.+..++..  |+-+++..+-....-... .....  +++.+.-.+..++  .+.+.++.+++++|++
T Consensus        73 ~~~h~~~~~~al~~--Gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~--~p~~~~~~~~i~~g~i  141 (323)
T 1xea_A           73 TDVHSTLAAFFLHL--GIPTFVDKPLAASAQECENLYELAEKHHQPLYVGFNRRH--IPLYNQHLSELAQQEC  141 (323)
T ss_dssp             GGGHHHHHHHHHHT--TCCEEEESCSCSSHHHHHHHHHHHHHTTCCEEEECGGGC--CHHHHHHCHHHHHTSC
T ss_pred             chhHHHHHHHHHHC--CCeEEEeCCCcCCHHHHHHHHHHHHhcCCeEEEeecccc--CHHHHHHHHHHhcCCc
Confidence            87677777788875  565555432211110100 01111  4555443333333  3567888888888876

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=95.47  E-value=0.05  Score=48.28  Aligned_cols=80  Identities=11%  Similarity=0.140  Sum_probs=50.7

Q ss_pred             CCCEEEEEcC---CHHHHHHHHHHHHcCCCeEEEEcCChh---hHHHHHH-cCCCEEEcCCCCC-ccHHHHHHHHc--CC
Q 018072          195 RGSSVAVFGL---GAVGLAAAEGARIAGASRIIGVDRSSK---RFEEAKK-FGVTDFVNTSEHD-RPIQEVIAEMT--NG  264 (361)
Q Consensus       195 ~g~~VlI~G~---g~vG~~a~~~a~~~g~~~Vi~~~~~~~---~~~~~~~-~G~~~vv~~~~~~-~~~~~~i~~~~--~~  264 (361)
                      .+.++||+|+   |++|...++.+...|+ +|+.++++++   ..+.+.+ .+....+..+-.+ ..+.+.+....  -+
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   83 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG   83 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3678999985   6999999998888898 8999988875   3333332 3422233222222 12333333322  13


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      ++|++|+++|.
T Consensus        84 ~id~lv~nAg~   94 (275)
T 2pd4_A           84 SLDFIVHSVAF   94 (275)
T ss_dssp             CEEEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            79999999873

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=95.47  E-value=0.022  Score=52.36  Aligned_cols=46  Identities=24%  Similarity=0.417  Sum_probs=39.3

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCC
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV  241 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~  241 (361)
                      .|.+|.|+|.|.+|...++.++..|. +|++.+++..+.+.+.++|+
T Consensus       144 ~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~  189 (330)
T 4e5n_A          144 DNATVGFLGMGAIGLAMADRLQGWGA-TLQYHEAKALDTQTEQRLGL  189 (330)
T ss_dssp             TTCEEEEECCSHHHHHHHHHTTTSCC-EEEEECSSCCCHHHHHHHTE
T ss_pred             CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCCCcHhHHHhcCc
Confidence            57899999999999999999999999 89999998755566656664

>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4

Probab=95.46  E-value=0.078  Score=43.65  Aligned_cols=101  Identities=12%  Similarity=0.072  Sum_probs=67.5

Q ss_pred             hhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc----CCC----EEEcCCCCCccHHHHH
Q 018072          187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVT----DFVNTSEHDRPIQEVI  258 (361)
Q Consensus       187 ~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~----G~~----~vv~~~~~~~~~~~~i  258 (361)
                      +.+....+++++||-+|+|. |..+..+++. +. +|+++|.+++..+.+++.    +..    .++..+..+  .    
T Consensus        44 l~~~~~~~~~~~vLdiG~G~-G~~~~~~~~~-~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~--~----  114 (194)
T 1dus_A           44 LVENVVVDKDDDILDLGCGY-GVIGIALADE-VK-STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE--N----  114 (194)
T ss_dssp             HHHHCCCCTTCEEEEETCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT--T----
T ss_pred             HHHHcccCCCCeEEEeCCCC-CHHHHHHHHc-CC-eEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhc--c----
Confidence            34556677999999999874 6777777776 66 999999999988877652    433    122211111  0    


Q ss_pred             HHHcCCCccEEEEccCC-------hHHHHHHHHHhcCCCcEEEEEcCC
Q 018072          259 AEMTNGGVDRSVECTGN-------IDNMISAFECVHDGWGVAVLVGVP  299 (361)
Q Consensus       259 ~~~~~~g~Dvvid~~g~-------~~~~~~~~~~l~~~~G~iv~~g~~  299 (361)
                        ...+.+|+|+....-       ...+..+.+.|+++ |++++....
T Consensus       115 --~~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~g-G~l~~~~~~  159 (194)
T 1dus_A          115 --VKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDN-GEIWVVIQT  159 (194)
T ss_dssp             --CTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEE-EEEEEEEES
T ss_pred             --cccCCceEEEECCCcccchhHHHHHHHHHHHHcCCC-CEEEEEECC
Confidence              113479999975431       24567778889997 998877543

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=95.46  E-value=0.064  Score=49.28  Aligned_cols=36  Identities=22%  Similarity=0.370  Sum_probs=32.3

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  230 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~  230 (361)
                      .+.+|+|+|+|++|..+++.+...|..+++.+|.+.
T Consensus        33 ~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~   68 (340)
T 3rui_A           33 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT   68 (340)
T ss_dssp             HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred             hCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence            467999999999999999999999999999997753

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=95.45  E-value=0.014  Score=53.30  Aligned_cols=80  Identities=14%  Similarity=0.085  Sum_probs=47.3

Q ss_pred             CCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhH--HHHHHcC--CC-EEEcCCCCCccHHHHHHHHcCC-
Q 018072          192 KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRF--EEAKKFG--VT-DFVNTSEHDRPIQEVIAEMTNG-  264 (361)
Q Consensus       192 ~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~--~~~~~~G--~~-~vv~~~~~~~~~~~~i~~~~~~-  264 (361)
                      ...++.+|||+|+ |.+|...++.+...|. +|+++++++++.  +.+..+.  .. .++..+-.+   .+.+..+..+ 
T Consensus        10 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d---~~~~~~~~~~~   85 (335)
T 1rpn_A           10 HGSMTRSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMAD---ACSVQRAVIKA   85 (335)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTC---HHHHHHHHHHH
T ss_pred             ccccCCeEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCCccccccchhhccccCceEEEECCCCC---HHHHHHHHHHc
Confidence            4568899999998 9999999998888898 899998876531  2222221  11 122222222   1223333223 


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      ++|+||++++.
T Consensus        86 ~~d~Vih~A~~   96 (335)
T 1rpn_A           86 QPQEVYNLAAQ   96 (335)
T ss_dssp             CCSEEEECCSC
T ss_pred             CCCEEEECccc
Confidence            58999999874

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=95.44  E-value=0.019  Score=52.39  Aligned_cols=73  Identities=22%  Similarity=0.267  Sum_probs=47.7

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 018072          197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  275 (361)
Q Consensus       197 ~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~  275 (361)
                      -+|||+|+ |.+|...++.+...|. +|+++++++++.+.+...++.. +..+-.+  . +.+..... ++|+||++++.
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~~-~~~Dl~d--~-~~~~~~~~-~~d~vih~a~~   87 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGH-DLVLIHRPSSQIQRLAYLEPEC-RVAEMLD--H-AGLERALR-GLDGVIFSAGY   87 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECTTSCGGGGGGGCCEE-EECCTTC--H-HHHHHHTT-TCSEEEEC---
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecChHhhhhhccCCeEE-EEecCCC--H-HHHHHHHc-CCCEEEECCcc
Confidence            47999998 9999999998888898 8999988877654333334433 2222222  1 23444433 69999999874

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=95.42  E-value=0.023  Score=49.76  Aligned_cols=82  Identities=20%  Similarity=0.225  Sum_probs=49.1

Q ss_pred             CCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEc-CChhhH----HHHHHcCCCE-EEcCCCCC-ccHHHHHHHHcC-
Q 018072          193 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD-RSSKRF----EEAKKFGVTD-FVNTSEHD-RPIQEVIAEMTN-  263 (361)
Q Consensus       193 ~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~-~~~~~~----~~~~~~G~~~-vv~~~~~~-~~~~~~i~~~~~-  263 (361)
                      ..++.+|||+|+ |++|...+..+...|+ +|++++ ++.++.    +.+++.+... .+..+-.+ .++.+.+..... 
T Consensus        10 ~~~~k~vlITGas~giG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   88 (256)
T 3ezl_A           10 VMSQRIAYVTGGMGGIGTSICQRLHKDGF-RVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAE   88 (256)
T ss_dssp             ---CEEEEETTTTSHHHHHHHHHHHHTTE-EEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHh
Confidence            356788999987 9999999998888898 777766 444433    2333445432 22222222 123333333221 


Q ss_pred             -CCccEEEEccCC
Q 018072          264 -GGVDRSVECTGN  275 (361)
Q Consensus       264 -~g~Dvvid~~g~  275 (361)
                       +++|++|+++|.
T Consensus        89 ~g~id~lv~~Ag~  101 (256)
T 3ezl_A           89 VGEIDVLVNNAGI  101 (256)
T ss_dssp             TCCEEEEEECCCC
T ss_pred             cCCCCEEEECCCC
Confidence             379999999873

>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}

Probab=95.40  E-value=0.072  Score=49.57  Aligned_cols=134  Identities=15%  Similarity=0.139  Sum_probs=83.6

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcC--------CCeEEEEcCChhhHHH-HHHcCCCEEEcCCCCCccHHHHHHHHcCCCccE
Q 018072          198 SVAVFGLGAVGLAAAEGARIAG--------ASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDR  268 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g--------~~~Vi~~~~~~~~~~~-~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dv  268 (361)
                      +|.|+|+|.+|...+...+...        ++-+.+.++++++.+. ++++|...++.  +    +.+.+   .+..+|+
T Consensus         8 rvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a~~~a~~~g~~~~~~--d----~~~ll---~~~~iDa   78 (390)
T 4h3v_A            8 GIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAVRAAAGKLGWSTTET--D----WRTLL---ERDDVQL   78 (390)
T ss_dssp             EEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHHHHHHHHHTCSEEES--C----HHHHT---TCTTCSE
T ss_pred             cEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHHHHHHHHcCCCcccC--C----HHHHh---cCCCCCE
Confidence            7889999999987666555432        2234556888877665 45688876542  1    33322   2237999


Q ss_pred             EEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecCh-hhh---c--cccEEEEeeecCCCcCCcHHHHHHHHHcC
Q 018072          269 SVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INV---L--NERTLKGTFFGNYKPRTDLPSVVDMYMNK  342 (361)
Q Consensus       269 vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~---~--~~~~l~g~~~~~~~~~~~~~~~~~~~~~~  342 (361)
                      |+.++....-.+.+..+|..  |+=|++-.+-....-.... ..+   .  +++.+.-.+..++  ...+.++.+++++|
T Consensus        79 V~I~tP~~~H~~~~~~al~a--GkhVl~EKPla~t~~ea~~l~~~~~~~~~~g~~~~v~~~~R~--~p~~~~~k~~i~~g  154 (390)
T 4h3v_A           79 VDVCTPGDSHAEIAIAALEA--GKHVLCEKPLANTVAEAEAMAAAAAKAAAGGIRSMVGFTYRR--VPAIALARKLVADG  154 (390)
T ss_dssp             EEECSCGGGHHHHHHHHHHT--TCEEEEESSSCSSHHHHHHHHHHHHHHHHTTCCEEEECGGGG--SHHHHHHHHHHHTT
T ss_pred             EEEeCChHHHHHHHHHHHHc--CCCceeecCcccchhHHHHHHHHHHHHHhcCCceEEEeeecc--CchHHHHHHHHHcC
Confidence            99999987888899999986  6778886543221111110 011   1  3444433333333  35788889999998


Q ss_pred             Cc
Q 018072          343 VI  344 (361)
Q Consensus       343 ~l  344 (361)
                      +|
T Consensus       155 ~i  156 (390)
T 4h3v_A          155 KI  156 (390)
T ss_dssp             SS
T ss_pred             CC
Confidence            87

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=95.39  E-value=0.088  Score=50.48  Aligned_cols=88  Identities=10%  Similarity=0.037  Sum_probs=54.1

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      +.+|+|+|+|.+|...++.+...|. +|++++++.++.+.+.+ ++....+..+-.+  .. .+.++.. ++|+|+++++
T Consensus         3 ~k~VlViGaG~iG~~ia~~L~~~G~-~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d--~~-~l~~~l~-~~DvVIn~a~   77 (450)
T 1ff9_A            3 TKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQHSTPISLDVND--DA-ALDAEVA-KHDLVISLIP   77 (450)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESSHHHHHHTTTTCTTEEEEECCTTC--HH-HHHHHHT-TSSEEEECCC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCcC-EEEEEECCHHHHHHHHHhcCCceEEEeecCC--HH-HHHHHHc-CCcEEEECCc
Confidence            5689999999999999888888887 79999999887765433 3321222222222  22 2223222 6999999998


Q ss_pred             ChHHHHHHHHHhcC
Q 018072          275 NIDNMISAFECVHD  288 (361)
Q Consensus       275 ~~~~~~~~~~~l~~  288 (361)
                      .......+..++..
T Consensus        78 ~~~~~~i~~a~l~~   91 (450)
T 1ff9_A           78 YTFHATVIKSAIRQ   91 (450)
T ss_dssp             --CHHHHHHHHHHH
T ss_pred             cccchHHHHHHHhC
Confidence            63222233344544

>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}

Probab=95.39  E-value=0.03  Score=48.90  Aligned_cols=101  Identities=17%  Similarity=0.123  Sum_probs=68.3

Q ss_pred             hhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC-EEEcCCCCCccHHHHHHHHcCCC
Q 018072          187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNGG  265 (361)
Q Consensus       187 ~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~-~vv~~~~~~~~~~~~i~~~~~~g  265 (361)
                      +.....++++.+||-+|+|. |..+..+++.....+|+++|.+++.++.+++.... .++..+..+  +      ..++.
T Consensus        25 l~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~--~------~~~~~   95 (259)
T 2p35_A           25 LLAQVPLERVLNGYDLGCGP-GNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGKADLAT--W------KPAQK   95 (259)
T ss_dssp             HHTTCCCSCCSSEEEETCTT-THHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEECCTTT--C------CCSSC
T ss_pred             HHHhcCCCCCCEEEEecCcC-CHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEECChhh--c------CccCC
Confidence            34556678899999999874 77777888776333899999999999988775222 222221111  1      01237


Q ss_pred             ccEEEEccC------ChHHHHHHHHHhcCCCcEEEEEc
Q 018072          266 VDRSVECTG------NIDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       266 ~Dvvid~~g------~~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      ||+|+....      ....+..+.+.|+++ |++++.-
T Consensus        96 fD~v~~~~~l~~~~~~~~~l~~~~~~L~pg-G~l~~~~  132 (259)
T 2p35_A           96 ADLLYANAVFQWVPDHLAVLSQLMDQLESG-GVLAVQM  132 (259)
T ss_dssp             EEEEEEESCGGGSTTHHHHHHHHGGGEEEE-EEEEEEE
T ss_pred             cCEEEEeCchhhCCCHHHHHHHHHHhcCCC-eEEEEEe
Confidence            999997542      234567778889997 9988764

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=95.38  E-value=0.069  Score=48.00  Aligned_cols=92  Identities=14%  Similarity=0.154  Sum_probs=56.8

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCC-----hhhHHHHHH---cCCCEEEcCCCCCccHHHHHHHHcCCCcc
Q 018072          197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS-----SKRFEEAKK---FGVTDFVNTSEHDRPIQEVIAEMTNGGVD  267 (361)
Q Consensus       197 ~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~-----~~~~~~~~~---~G~~~vv~~~~~~~~~~~~i~~~~~~g~D  267 (361)
                      .+|+|+|+ |.+|...++.+...|. +|++++++     +++.+.++.   .++. ++..+-.+  . +.+..... ++|
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~d--~-~~l~~~~~-~~d   78 (313)
T 1qyd_A            5 SRVLIVGGTGYIGKRIVNASISLGH-PTYVLFRPEVVSNIDKVQMLLYFKQLGAK-LIEASLDD--H-QRLVDALK-QVD   78 (313)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCSCCSSCHHHHHHHHHHHTTTCE-EECCCSSC--H-HHHHHHHT-TCS
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhCCC-cEEEEECCCcccchhHHHHHHHHHhCCeE-EEeCCCCC--H-HHHHHHHh-CCC
Confidence            57999998 9999999998888897 89999887     445444332   3443 33222222  2 23333333 699


Q ss_pred             EEEEccCCh------HHHHHHHHHhcCCC--cEEE
Q 018072          268 RSVECTGNI------DNMISAFECVHDGW--GVAV  294 (361)
Q Consensus       268 vvid~~g~~------~~~~~~~~~l~~~~--G~iv  294 (361)
                      +||++++..      ......++.+...+  .+++
T Consensus        79 ~vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v  113 (313)
T 1qyd_A           79 VVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFL  113 (313)
T ss_dssp             EEEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEE
T ss_pred             EEEECCccccchhhHHHHHHHHHHHHhcCCCceEE
Confidence            999998753      12334455554431  3666

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=95.38  E-value=0.016  Score=52.33  Aligned_cols=71  Identities=13%  Similarity=0.067  Sum_probs=51.8

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 018072          197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  276 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~  276 (361)
                      .+|.|+|.|.+|...++.+...|. +|+++++++++.+.+.+.|+...     .+  ..+    ...  .|+||.++..+
T Consensus        16 ~~I~vIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-----~~--~~~----~~~--aDvvi~~vp~~   81 (296)
T 3qha_A           16 LKLGYIGLGNMGAPMATRMTEWPG-GVTVYDIRIEAMTPLAEAGATLA-----DS--VAD----VAA--ADLIHITVLDD   81 (296)
T ss_dssp             CCEEEECCSTTHHHHHHHHTTSTT-CEEEECSSTTTSHHHHHTTCEEC-----SS--HHH----HTT--SSEEEECCSSH
T ss_pred             CeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCEEc-----CC--HHH----HHh--CCEEEEECCCh
Confidence            479999999999998888888898 89999999999888888775321     11  222    222  67888888765


Q ss_pred             HHHHH
Q 018072          277 DNMIS  281 (361)
Q Consensus       277 ~~~~~  281 (361)
                      ..++.
T Consensus        82 ~~~~~   86 (296)
T 3qha_A           82 AQVRE   86 (296)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            44443

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=95.37  E-value=0.052  Score=53.17  Aligned_cols=84  Identities=17%  Similarity=0.132  Sum_probs=54.7

Q ss_pred             CCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEE-cCCh-----------------hhHHHHHHcCCCEEEc-CCCCC
Q 018072          192 KPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSS-----------------KRFEEAKKFGVTDFVN-TSEHD  251 (361)
Q Consensus       192 ~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~-~~~~-----------------~~~~~~~~~G~~~vv~-~~~~~  251 (361)
                      .++++.++||+|+ |++|...++.+...|+.+|+.+ +++.                 +..+.+++.|....+. -+-.+
T Consensus       247 ~~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd  326 (525)
T 3qp9_A          247 WWQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTD  326 (525)
T ss_dssp             SSCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTS
T ss_pred             eecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCC
Confidence            3578899999987 9999999988888898667777 7762                 2233345567654322 22222


Q ss_pred             -ccHHHHHHHHcC-CCccEEEEccCC
Q 018072          252 -RPIQEVIAEMTN-GGVDRSVECTGN  275 (361)
Q Consensus       252 -~~~~~~i~~~~~-~g~Dvvid~~g~  275 (361)
                       ..+.+.+..... +.+|.||+++|.
T Consensus       327 ~~~v~~~~~~i~~~g~id~vVh~AGv  352 (525)
T 3qp9_A          327 AEAAARLLAGVSDAHPLSAVLHLPPT  352 (525)
T ss_dssp             HHHHHHHHHTSCTTSCEEEEEECCCC
T ss_pred             HHHHHHHHHHHHhcCCCcEEEECCcC
Confidence             224444444332 278999999884

>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}

Probab=95.36  E-value=0.098  Score=46.10  Aligned_cols=104  Identities=16%  Similarity=0.175  Sum_probs=64.7

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc-------CCC---EEEcCCCCCccHHHHHHH
Q 018072          191 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-------GVT---DFVNTSEHDRPIQEVIAE  260 (361)
Q Consensus       191 ~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~-------G~~---~vv~~~~~~~~~~~~i~~  260 (361)
                      ...+++++||=+|+|. |..++.+++.....+|+++|.+++..+.+++.       +..   .++..+-.+ ...+....
T Consensus        32 ~~~~~~~~VLDlG~G~-G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~-~~~~~~~~  109 (260)
T 2ozv_A           32 VADDRACRIADLGAGA-GAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTL-RAKARVEA  109 (260)
T ss_dssp             CCCCSCEEEEECCSSS-SHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTC-CHHHHHHT
T ss_pred             hcccCCCEEEEeCChH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHH-Hhhhhhhh
Confidence            4567788999888754 55666667666334999999999998888763       222   122222222 11111111


Q ss_pred             -HcCCCccEEEEccC------------------------ChHHHHHHHHHhcCCCcEEEEEc
Q 018072          261 -MTNGGVDRSVECTG------------------------NIDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       261 -~~~~g~Dvvid~~g------------------------~~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                       +..+.||+|+-...                        -...+..+.+.|+++ |+++++-
T Consensus       110 ~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~  170 (260)
T 2ozv_A          110 GLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSG-GQLSLIS  170 (260)
T ss_dssp             TCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             ccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCC-CEEEEEE
Confidence             22347999998621                        123467788899997 9988763

>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}

Probab=95.33  E-value=0.13  Score=48.70  Aligned_cols=138  Identities=16%  Similarity=0.208  Sum_probs=84.9

Q ss_pred             CEEEEEcCCH---HHHHHHHHHHHcCCCeEE--EEcCChhhHHH-HHHcCCC--EEEcCCCCCccHHHHHHHHc--CCCc
Q 018072          197 SSVAVFGLGA---VGLAAAEGARIAGASRII--GVDRSSKRFEE-AKKFGVT--DFVNTSEHDRPIQEVIAEMT--NGGV  266 (361)
Q Consensus       197 ~~VlI~G~g~---vG~~a~~~a~~~g~~~Vi--~~~~~~~~~~~-~~~~G~~--~vv~~~~~~~~~~~~i~~~~--~~g~  266 (361)
                      -+|.|+|+|.   +|...+..++..+.-.++  +.++++++.+. ++++|..  .++  .+    +.+.+....  +..+
T Consensus        38 ~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a~~~a~~~g~~~~~~~--~~----~~~ll~~~~~~~~~v  111 (417)
T 3v5n_A           38 IRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKAEASGRELGLDPSRVY--SD----FKEMAIREAKLKNGI  111 (417)
T ss_dssp             EEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHHHHHHHHHTCCGGGBC--SC----HHHHHHHHHHCTTCC
T ss_pred             ceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHcCCCccccc--CC----HHHHHhcccccCCCC
Confidence            5899999987   998887777766532555  45888887655 4568875  222  21    655655421  1258


Q ss_pred             cEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecC-hhhhc--cccEEEEeeecCCCcCCcHHHHHHHHHcCC
Q 018072          267 DRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKV  343 (361)
Q Consensus       267 Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~-~~~~~--~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~  343 (361)
                      |+|+.++....-.+.+..+|..  |+-|++-.+-....-... .....  +++.+.-.+..++  ...+.++.+++++|+
T Consensus       112 D~V~I~tp~~~H~~~~~~al~a--GkhVl~EKPla~~~~ea~~l~~~a~~~g~~~~v~~~~R~--~p~~~~~k~~i~~G~  187 (417)
T 3v5n_A          112 EAVAIVTPNHVHYAAAKEFLKR--GIHVICDKPLTSTLADAKKLKKAADESDALFVLTHNYTG--YPMVRQAREMIENGD  187 (417)
T ss_dssp             SEEEECSCTTSHHHHHHHHHTT--TCEEEEESSSCSSHHHHHHHHHHHHHCSSCEEEECGGGG--SHHHHHHHHHHHTTT
T ss_pred             cEEEECCCcHHHHHHHHHHHhC--CCeEEEECCCcCCHHHHHHHHHHHHHcCCEEEEEecccC--CHHHHHHHHHHhcCC
Confidence            9999999987778888888875  677777654311111111 01111  4554433332232  467888899999887


Q ss_pred             c
Q 018072          344 I  344 (361)
Q Consensus       344 l  344 (361)
                      |
T Consensus       188 i  188 (417)
T 3v5n_A          188 I  188 (417)
T ss_dssp             T
T ss_pred             C
Confidence            6

>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A

Probab=95.32  E-value=0.063  Score=45.99  Aligned_cols=102  Identities=18%  Similarity=0.158  Sum_probs=66.1

Q ss_pred             hhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHHcC---CC-EEEcCCCCCccHHHHHHHHcC
Q 018072          189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKFG---VT-DFVNTSEHDRPIQEVIAEMTN  263 (361)
Q Consensus       189 ~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~~G---~~-~vv~~~~~~~~~~~~i~~~~~  263 (361)
                      +...++++++||-+|+|. |..+..+++..|. .+|+++|.+++..+.+++.-   .. .++..+..+  .. ... ...
T Consensus        67 ~~~~~~~~~~vLDlG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~--~~-~~~-~~~  141 (227)
T 1g8a_A           67 KNFPIKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATK--PE-EYR-ALV  141 (227)
T ss_dssp             CCCCCCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTC--GG-GGT-TTC
T ss_pred             HhcCCCCCCEEEEEeccC-CHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCC--cc-hhh-ccc
Confidence            344578999999999976 8888888888652 49999999997666654321   11 122211111  00 000 112


Q ss_pred             CCccEEEEccCChH---H-HHHHHHHhcCCCcEEEEE
Q 018072          264 GGVDRSVECTGNID---N-MISAFECVHDGWGVAVLV  296 (361)
Q Consensus       264 ~g~Dvvid~~g~~~---~-~~~~~~~l~~~~G~iv~~  296 (361)
                      +.+|+|+.....+.   . +..+.+.|+++ |++++.
T Consensus       142 ~~~D~v~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~  177 (227)
T 1g8a_A          142 PKVDVIFEDVAQPTQAKILIDNAEVYLKRG-GYGMIA  177 (227)
T ss_dssp             CCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             CCceEEEECCCCHhHHHHHHHHHHHhcCCC-CEEEEE
Confidence            37999997765432   3 77888999997 998877

>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*

Probab=95.32  E-value=0.095  Score=46.93  Aligned_cols=74  Identities=23%  Similarity=0.236  Sum_probs=54.2

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChH
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  277 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~  277 (361)
                      +|.|+|+|.+|...+..+...|. +|+++++++++.+.+.+.|+..   .  .+  ..+.+.     ..|+||.++..+.
T Consensus         2 ~i~iiG~G~mG~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~--~~--~~~~~~-----~~Dvvi~~vp~~~   68 (296)
T 2gf2_A            2 PVGFIGLGNMGNPMAKNLMKHGY-PLIIYDVFPDACKEFQDAGEQV---V--SS--PADVAE-----KADRIITMLPTSI   68 (296)
T ss_dssp             CEEEECCSTTHHHHHHHHHHTTC-CEEEECSSTHHHHHHHTTTCEE---C--SS--HHHHHH-----HCSEEEECCSSHH
T ss_pred             eEEEEeccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCee---c--CC--HHHHHh-----cCCEEEEeCCCHH
Confidence            58899999999998888888888 8999999999988888776531   1  11  333322     3689999987666


Q ss_pred             HHHHHHH
Q 018072          278 NMISAFE  284 (361)
Q Consensus       278 ~~~~~~~  284 (361)
                      .++..+.
T Consensus        69 ~~~~v~~   75 (296)
T 2gf2_A           69 NAIEAYS   75 (296)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            6666554

>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*

Probab=95.32  E-value=0.14  Score=43.75  Aligned_cols=98  Identities=14%  Similarity=0.149  Sum_probs=66.4

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHH-HcCCCccEE
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAE-MTNGGVDRS  269 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~-~~~~g~Dvv  269 (361)
                      ++.+||=+|+|. |..++.+|+.....+|+++|.+++.++.+++    .|.+.+ .....+  ..+.+.. +.++.+|.|
T Consensus        34 ~~~~vLDiGcG~-G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv-~~~~~D--a~~~l~~~~~~~~~d~v  109 (218)
T 3dxy_A           34 EAPVTLEIGFGM-GASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNL-RVMCHD--AVEVLHKMIPDNSLRMV  109 (218)
T ss_dssp             CCCEEEEESCTT-CHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSE-EEECSC--HHHHHHHHSCTTCEEEE
T ss_pred             CCCeEEEEeeeC-hHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcE-EEEECC--HHHHHHHHcCCCChheE
Confidence            667888889875 7778888887644489999999987777643    455432 222223  3333443 334478988


Q ss_pred             EEccCCh--------------HHHHHHHHHhcCCCcEEEEEc
Q 018072          270 VECTGNI--------------DNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       270 id~~g~~--------------~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      +-....+              ..+..+.+.|+++ |.+++..
T Consensus       110 ~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpG-G~l~i~t  150 (218)
T 3dxy_A          110 QLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLG-GVFHMAT  150 (218)
T ss_dssp             EEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             EEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCC-cEEEEEe
Confidence            8663322              4788889999997 9987764

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=95.31  E-value=0.12  Score=48.13  Aligned_cols=111  Identities=16%  Similarity=0.147  Sum_probs=71.6

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC----hhh---------HHHHHHcCCCEEEcCCCCCccHHHHHHHH
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS----SKR---------FEEAKKFGVTDFVNTSEHDRPIQEVIAEM  261 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~----~~~---------~~~~~~~G~~~vv~~~~~~~~~~~~i~~~  261 (361)
                      ++.+|+|+|+|..|..+++++..+|+++|+.+|++    .+|         .+++++...      .....++.+.++  
T Consensus       191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~------~~~~~~L~eav~--  262 (388)
T 1vl6_A          191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNP------ERLSGDLETALE--  262 (388)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCT------TCCCSCHHHHHT--
T ss_pred             CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhc------cCchhhHHHHHc--
Confidence            56799999999999999999999999899999998    544         444444321      111112444442  


Q ss_pred             cCCCccEEEEccCChHHH-HHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEee
Q 018072          262 TNGGVDRSVECTGNIDNM-ISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTF  322 (361)
Q Consensus       262 ~~~g~Dvvid~~g~~~~~-~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~  322 (361)
                         ++|++|-+++. ..+ +..++.|+++ ..+..+..+.    ....+...+ .+..+..+.
T Consensus       263 ---~ADVlIG~Sap-~l~t~emVk~Ma~~-pIIfalSNPt----~E~~p~~a~~~g~~i~atG  316 (388)
T 1vl6_A          263 ---GADFFIGVSRG-NILKPEWIKKMSRK-PVIFALANPV----PEIDPELAREAGAFIVATG  316 (388)
T ss_dssp             ---TCSEEEECSCS-SCSCHHHHTTSCSS-CEEEECCSSS----CSSCHHHHHHTTCSEEEES
T ss_pred             ---cCCEEEEeCCC-CccCHHHHHhcCCC-CEEEEcCCCC----CCCCHHHHHHhcCeEEEeC
Confidence               47999999874 443 4667778875 6665555433    133344333 344555553

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=95.30  E-value=0.048  Score=48.68  Aligned_cols=77  Identities=21%  Similarity=0.331  Sum_probs=57.2

Q ss_pred             CCCCEEEEEcCC-HHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEc
Q 018072          194 ERGSSVAVFGLG-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  272 (361)
Q Consensus       194 ~~g~~VlI~G~g-~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~  272 (361)
                      -.|.+++|+|.| .+|..+++++...|+ +|+.+.+...                   +  +.+.++     .+|+||.+
T Consensus       159 l~Gk~vvVvGrs~iVG~plA~lL~~~gA-tVtv~hs~T~-------------------~--L~~~~~-----~ADIVI~A  211 (286)
T 4a5o_A          159 LYGMDAVVVGASNIVGRPMALELLLGGC-TVTVTHRFTR-------------------D--LADHVS-----RADLVVVA  211 (286)
T ss_dssp             CTTCEEEEECTTSTTHHHHHHHHHHTTC-EEEEECTTCS-------------------C--HHHHHH-----TCSEEEEC
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCCc-------------------C--HHHHhc-----cCCEEEEC
Confidence            479999999985 699999999999999 8888754321                   1  333332     47999999


Q ss_pred             cCChHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072          273 TGNIDNMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       273 ~g~~~~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      +|.+..+..  +.++++ ..++.+|...
T Consensus       212 vg~p~~I~~--~~vk~G-avVIDvgi~~  236 (286)
T 4a5o_A          212 AGKPGLVKG--EWIKEG-AIVIDVGINR  236 (286)
T ss_dssp             CCCTTCBCG--GGSCTT-CEEEECCSCS
T ss_pred             CCCCCCCCH--HHcCCC-eEEEEecccc
Confidence            998766543  457886 8888898654

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=95.28  E-value=0.068  Score=48.13  Aligned_cols=90  Identities=18%  Similarity=0.238  Sum_probs=59.4

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEc-------CCCCCccHHHHHHHHcC--CCccE
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN-------TSEHDRPIQEVIAEMTN--GGVDR  268 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~-------~~~~~~~~~~~i~~~~~--~g~Dv  268 (361)
                      +|.|+|+|.+|...+..+...|. +|+++++++++.+.+++.|......       ....+  .    .+...  ..+|+
T Consensus         5 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~d~   77 (316)
T 2ew2_A            5 KIAIAGAGAMGSRLGIMLHQGGN-DVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFS--P----EEIDHQNEQVDL   77 (316)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEEC--G----GGCCTTSCCCSE
T ss_pred             eEEEECcCHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeec--c----hhhcccCCCCCE
Confidence            79999999999998888888888 8999999999988887766432210       00000  0    01111  16899


Q ss_pred             EEEccCChHHHHHHHHHhc----CCCcEEEEE
Q 018072          269 SVECTGNIDNMISAFECVH----DGWGVAVLV  296 (361)
Q Consensus       269 vid~~g~~~~~~~~~~~l~----~~~G~iv~~  296 (361)
                      ||-++.. ......++.+.    ++ ..++.+
T Consensus        78 vi~~v~~-~~~~~v~~~l~~~l~~~-~~iv~~  107 (316)
T 2ew2_A           78 IIALTKA-QQLDAMFKAIQPMITEK-TYVLCL  107 (316)
T ss_dssp             EEECSCH-HHHHHHHHHHGGGCCTT-CEEEEC
T ss_pred             EEEEecc-ccHHHHHHHHHHhcCCC-CEEEEe
Confidence            9999986 44555555443    33 455555

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=95.28  E-value=0.047  Score=49.10  Aligned_cols=78  Identities=19%  Similarity=0.247  Sum_probs=56.3

Q ss_pred             CCCCEEEEEcCC-HHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEc
Q 018072          194 ERGSSVAVFGLG-AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  272 (361)
Q Consensus       194 ~~g~~VlI~G~g-~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~  272 (361)
                      -.|.+++|+|.| .+|..+++++...|+ +|+.+.+....++                   +.+.++     .+|+||.+
T Consensus       163 l~Gk~vvVIG~s~iVG~p~A~lL~~~gA-tVtv~~~~T~~l~-------------------l~~~~~-----~ADIVI~A  217 (300)
T 4a26_A          163 MAGKRAVVLGRSNIVGAPVAALLMKENA-TVTIVHSGTSTED-------------------MIDYLR-----TADIVIAA  217 (300)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTSCHHH-------------------HHHHHH-----TCSEEEEC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCCCCch-------------------hhhhhc-----cCCEEEEC
Confidence            478999999985 589999999999999 8988866332221                   002221     47999999


Q ss_pred             cCChHHHHHHHHHhcCCCcEEEEEcCC
Q 018072          273 TGNIDNMISAFECVHDGWGVAVLVGVP  299 (361)
Q Consensus       273 ~g~~~~~~~~~~~l~~~~G~iv~~g~~  299 (361)
                      +|.+..+..  +.++++ ..++.+|..
T Consensus       218 vg~p~~I~~--~~vk~G-avVIDvgi~  241 (300)
T 4a26_A          218 MGQPGYVKG--EWIKEG-AAVVDVGTT  241 (300)
T ss_dssp             SCCTTCBCG--GGSCTT-CEEEECCCE
T ss_pred             CCCCCCCcH--HhcCCC-cEEEEEecc
Confidence            998765543  357886 788888854

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=95.27  E-value=0.18  Score=46.52  Aligned_cols=98  Identities=15%  Similarity=0.171  Sum_probs=59.6

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhH--HHHHHc-CCCEEEcCC-CCCccHHHHHHHHcCCCccEEE
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRF--EEAKKF-GVTDFVNTS-EHDRPIQEVIAEMTNGGVDRSV  270 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~--~~~~~~-G~~~vv~~~-~~~~~~~~~i~~~~~~g~Dvvi  270 (361)
                      +.+|+|+|+ |.+|...++.+...|. +|+++++++++.  +.+.+. ++ .++..+ -.+  . +.+..... ++|+||
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~l~~~~~v-~~v~~D~l~d--~-~~l~~~~~-~~d~Vi   78 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGH-HVRAQVHSLKGLIAEELQAIPNV-TLFQGPLLNN--V-PLMDTLFE-GAHLAF   78 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCSCSHHHHHHHTSTTE-EEEESCCTTC--H-HHHHHHHT-TCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCCChhhHHHHhhcCCc-EEEECCccCC--H-HHHHHHHh-cCCEEE
Confidence            467999998 9999999988888888 898888887664  333332 33 233222 222  1 23333332 589999


Q ss_pred             EccCCh-----HHHHHHHHHhcCCC--cEEEEEcCC
Q 018072          271 ECTGNI-----DNMISAFECVHDGW--GVAVLVGVP  299 (361)
Q Consensus       271 d~~g~~-----~~~~~~~~~l~~~~--G~iv~~g~~  299 (361)
                      .+.+..     ......++.+...+  ++++.++..
T Consensus        79 ~~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~  114 (352)
T 1xgk_A           79 INTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMP  114 (352)
T ss_dssp             ECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECC
T ss_pred             EcCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCc
Confidence            877642     11234444444331  588888764

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=95.26  E-value=0.0079  Score=53.44  Aligned_cols=75  Identities=24%  Similarity=0.286  Sum_probs=47.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcC--CCccEEEE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN--GGVDRSVE  271 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~--~g~Dvvid  271 (361)
                      .|.++||+|+ |++|...++.+...|+ +|+.++++.++.+....+    ..|..+. ....+.+.....  +++|++|+
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~----~~Dv~~~-~~~~~~~~~~~~~~g~iD~lvn  100 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGA-RVAVADRAVAGIAADLHL----PGDLREA-AYADGLPGAVAAGLGRLDIVVN  100 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECSSCCTTSCCSEEC----CCCTTSH-HHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHhhhcc----CcCCCCH-HHHHHHHHHHHHhcCCCCEEEE
Confidence            4688999988 8999999998888999 899998887654321110    1111111 112222222221  37999999


Q ss_pred             ccCC
Q 018072          272 CTGN  275 (361)
Q Consensus       272 ~~g~  275 (361)
                      ++|.
T Consensus       101 nAg~  104 (266)
T 3uxy_A          101 NAGV  104 (266)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9884

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	361
d1d1ta2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	3e-49
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	1e-44
d1e3ia2	174	c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (	2e-43
d2fzwa1	197	b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase	3e-43
d1cdoa1	199	b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase	1e-42
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	2e-41
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	1e-40
d1e3ia1	202	b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase	2e-40
d2jhfa1	198	b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase	5e-39
d1p0fa1	198	b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro	3e-38
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	3e-34
d1f8fa2	174	c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {	4e-34
d1f8fa1	194	b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr	5e-27
d1uufa1	179	b.35.1.2 (A:3-144,A:313-349) Hypothetical protein	3e-22
d1vj0a1	184	b.35.1.2 (A:2-155,A:338-367) Hypothetical protein	2e-18
d1llua1	175	b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase	5e-18
d1jqba2	174	c.2.1.1 (A:1140-1313) Bacterial secondary alcohol	6e-18
d1piwa1	192	b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy	5e-17
d1jvba1	177	b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase	6e-17
d1vj0a2	182	c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T	1e-14
d1e3ja1	178	b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor	3e-14
d1h2ba1	171	b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenas	6e-14
d1rjwa1	171	b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase	9e-14
d1h2ba2	172	c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo	1e-12
d1kola1	201	b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog	2e-12
d1pl8a2	171	c.2.1.1 (A:146-316) Ketose reductase (sorbitol deh	3e-12
d1uufa2	168	c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc	7e-11
d1pl8a1	185	b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor	9e-11
d1jqba1	177	b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secon	2e-10
d1kola2	195	c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps	5e-10
d1iz0a1	131	b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase	3e-06
d1yb5a1	150	b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductas	4e-06
d1gu7a1	175	b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA redu	4e-04

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score =  161 bits (408), Expect = 3e-49
 Identities = 71/175 (40%), Positives = 104/175 (59%)

Query: 168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD 227
           AP +KVC++ CG STG GA +   K + GS+  VFGLG VGL+   G + AGASRIIG+D
Sbjct: 2   APPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGID 61

Query: 228 RSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH 287
            +  +FE+A   G T+ ++  +  +PI EV++EMT   V  + E  G+++ MI A    H
Sbjct: 62  LNKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCH 121

Query: 288 DGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 342
             +G +V+VGVP    +    P+ +   RT KG  FG  K R D+P +V  ++ K
Sbjct: 122 MNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTEFLAK 176

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score =  149 bits (376), Expect = 1e-44
 Identities = 79/175 (45%), Positives = 113/175 (64%), Gaps = 2/175 (1%)

Query: 168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD 227
           APL+  C++ CG +TG GA +N AK   GS+ AVFGLG VG +A  G + AGASRIIGV 
Sbjct: 1   APLES-CLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVG 59

Query: 228 RSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH 287
               +F +A + G T+ +N  ++D+PI EVI E TNGGVD +VEC G I+ M++A +  +
Sbjct: 60  THKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTY 119

Query: 288 DGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 342
            G GV V++G+ S +      P+ +L  R+LKG+ FG +K   ++  +VD YM K
Sbjct: 120 CGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGFKGE-EVSRLVDDYMKK 173

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score =  146 bits (368), Expect = 2e-43
 Identities = 77/175 (44%), Positives = 112/175 (64%), Gaps = 2/175 (1%)

Query: 168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD 227
           A L++VC++ CG S+G GA +N AK   GS+ AVFGLG VGL+A  G +IAGASRII +D
Sbjct: 1   ANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAID 60

Query: 228 RSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH 287
            + ++F +AK  G TD +N  E D+P+Q+VI E+T GGVD S++C G    + +A +C  
Sbjct: 61  INGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTV 120

Query: 288 DGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 342
            GWG   +VG    +       ++V+  R++ GTFFG +K    +P++V  Y NK
Sbjct: 121 LGWGSCTVVGAKVDEMTIP--TVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNK 173

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score =  146 bits (370), Expect = 3e-43
 Identities = 88/197 (44%), Positives = 124/197 (62%), Gaps = 1/197 (0%)

Query: 5   AGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF 64
           A  ++ CKAAVAWEAGKPL I+++EVAPP+A EVRIKI  T++C TD Y          F
Sbjct: 1   ANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCF 60

Query: 65  PRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRG 124
           P I GH  AG+VESVGEGV+ L+ GD V+P++  +CG+C+ C +  +N+C  +R+   +G
Sbjct: 61  PVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG 120

Query: 125 VMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGL 184
           +M  DG SRF+  G+ + H++GTSTFSEYTVV    VAKI+PL  +D+    +       
Sbjct: 121 LM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFVTHNLSFDEIN 179

Query: 185 GATLNVAKPERGSSVAV 201
            A   +   +   +V  
Sbjct: 180 KAFELMHSGKSIRTVVK 196

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score =  145 bits (365), Expect = 1e-42
 Identities = 84/200 (42%), Positives = 118/200 (59%), Gaps = 1/200 (0%)

Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           +T G ++ CKAAVAWEA KPL+I+++EV  P A E+RIKI  T +C TDLY         
Sbjct: 1   ATVGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKD 60

Query: 63  LFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV 122
            FP + GHE AG+VESVG GV++ + G+ V+P+F  +CG+CR C+S  +N C     N  
Sbjct: 61  GFPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANES 120

Query: 123 RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 182
             VM +  ++RF+  G  V  FLGTSTFS+YTVV+   VAKI+P   LD+       + +
Sbjct: 121 PDVM-SPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLES 179

Query: 183 GLGATLNVAKPERGSSVAVF 202
              A   +   +   +V   
Sbjct: 180 VNDAIDLMKHGKCIRTVLSL 199

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score =  141 bits (355), Expect = 2e-41
 Identities = 81/175 (46%), Positives = 117/175 (66%)

Query: 168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD 227
           +PL+KVC++ CG STG G+ + VAK  +GS+ AVFGLG VGL+   G + AGA+RIIGVD
Sbjct: 1   SPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVD 60

Query: 228 RSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH 287
            +  +F +AK+ G T+ VN  ++ +PIQEV+ EM+NGGVD S E  G +D M++A  C  
Sbjct: 61  INKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQ 120

Query: 288 DGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 342
           + +GV+V+VGVP         P+ +L+ RT KG  FG +K +  +P +V  +M K
Sbjct: 121 EAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAK 175

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score =  139 bits (350), Expect = 1e-40
 Identities = 93/175 (53%), Positives = 119/175 (68%)

Query: 168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD 227
           APLDKVC+L CG+STG GA +N AK E GS  AVFGLG VGLA   G ++AGASRIIGVD
Sbjct: 1   APLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVD 60

Query: 228 RSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH 287
            +  +F  AK+FG T+ +N  +  +PIQEV+ EMT+GGVD S EC GN+  M +A E  H
Sbjct: 61  INKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACH 120

Query: 288 DGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 342
            GWGV+V+VGV +      T+P  ++  RT KGT FG +K    +P +V  YM+K
Sbjct: 121 KGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSK 175

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score =  139 bits (350), Expect = 2e-40
 Identities = 75/201 (37%), Positives = 121/201 (60%), Gaps = 7/201 (3%)

Query: 4   TAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL 63
           T G ++ CKAA+AW+ G PL I+++EV+PP+A EVRI++  T +C TD+   + K +  L
Sbjct: 2   TQGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK-KKAL 60

Query: 64  FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRI---N 120
           FP + GHE AG+VESVG GV++ + GD V+P F  +C  C+ C S ++N+C  LR     
Sbjct: 61  FPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYP 120

Query: 121 PVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGV 180
            +   ++ D  SRF+  G  + HF+G S+FS+YTVV    +A+++    LD +   +   
Sbjct: 121 TIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEFDLDLLVTHALPF 180

Query: 181 STGLGATLNVAKPERGSSVAV 201
            + +   +++ K   G S+  
Sbjct: 181 ES-INDAIDLMKE--GKSIRT 198

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score =  135 bits (341), Expect = 5e-39
 Identities = 92/203 (45%), Positives = 123/203 (60%), Gaps = 9/203 (4%)

Query: 3   STAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           STAG ++ CKAAV WE  KP  I++VEVAPP+A EVRIK+  T +CR+D +       TP
Sbjct: 1   STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP 60

Query: 63  LFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV 122
             P I GHEAAG+VES+GEGV+ +  GD V+P+FT +CG CR C+    N C    ++  
Sbjct: 61  -LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMP 119

Query: 123 RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDK--VCILSCGV 180
           RG M  DG SRF+  G+P++HFLGTSTFS+YTVV    VAKI+    LD     +L    
Sbjct: 120 RGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAAFALDPLITHVLPFE- 177

Query: 181 STGLGATLNVAKPERGSSVAVFG 203
              +    ++ +   G S+    
Sbjct: 178 --KINEGFDLLRS--GESIRTIL 196

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score =  133 bits (335), Expect = 3e-38
 Identities = 77/206 (37%), Positives = 116/206 (56%), Gaps = 12/206 (5%)

Query: 4   TAGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL 63
           TAG  +TCKAAVAWE  KPL ++ + VAPP+A EVRIKI  + +C +D    +    +  
Sbjct: 2   TAGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPSKF 61

Query: 64  FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVR 123
              +  HEA GVVES+G GV+ ++ GD V+P+F  +CG CR C+S  SN C+   +   +
Sbjct: 62  PVILG-HEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGA-K 119

Query: 124 GVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTG 183
             ++AD  SRF+  G+P+ + +GTSTF+EYTVV    VAKI+P   ++ +          
Sbjct: 120 TGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKINVNFLVSTKLT---- 175

Query: 184 LGATLNVAKPERGSSVAVFGLGAVGL 209
                 + +  +   +   G G   +
Sbjct: 176 ------LDQINKAFELLSSGQGVRSI 195

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score =  122 bits (306), Expect = 3e-34
 Identities = 95/175 (54%), Positives = 121/175 (69%), Gaps = 1/175 (0%)

Query: 168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD 227
           APLD VC+L CGVSTG GA +N AK E GS+ AVFGLGAVGLAA  G   AGA RII VD
Sbjct: 1   APLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVD 60

Query: 228 RSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH 287
            +  +FE+AK FG TDFVN ++H  PI +V+++MTNGGVD S+EC GN+  M +A E   
Sbjct: 61  LNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCL 120

Query: 288 DGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNK 342
            GWGV+VLVG      V  T+PI ++  RT KG+ FG +K +  +P +V  Y++K
Sbjct: 121 KGWGVSVLVGWTDLHDVA-TRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDK 174

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score =  122 bits (306), Expect = 4e-34
 Identities = 56/174 (32%), Positives = 87/174 (50%), Gaps = 4/174 (2%)

Query: 169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR 228
           P++ +  L CG+ TG GA +N  K    SS   +G GAVGL+A   A++ GAS II VD 
Sbjct: 2   PIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDI 61

Query: 229 SSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHD 288
              R E AK+ G T  +N+   D      I E+T+GGV+ ++E TG+ + +    +    
Sbjct: 62  VESRLELAKQLGATHVINSKTQD--PVAAIKEITDGGVNFALESTGSPEILKQGVDA-LG 118

Query: 289 GWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKPRTDLPSVVDMYMN 341
             G   +VG P           ++L   +T+ G   G+  P+  +P +V +Y  
Sbjct: 119 ILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQ 172

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score =  103 bits (257), Expect = 5e-27
 Identities = 51/219 (23%), Positives = 86/219 (39%), Gaps = 30/219 (13%)

Query: 10  TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFG 69
              AAV    G    +Q +++  PQ  EV +K+  T +C TDL   + K   P  P + G
Sbjct: 3   DIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVP-LPAVLG 61

Query: 70  HEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLAD 129
           HE +G++E++G  V++L+VGDHV+ +  G CG C  C +     C         G   ++
Sbjct: 62  HEGSGIIEAIGPNVTELQVGDHVV-LSYGYCGKCTQCNTGNPAYCSEFFGRNFSGAD-SE 119

Query: 130 GQSRFSINGE--PVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGAT 187
           G      + +    +HF   S+F+ Y +       K+    P D++              
Sbjct: 120 GNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDFPFDQLVKFYAF-------- 171

Query: 188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGV 226
                              +  AA +  +      II +
Sbjct: 172 -----------------DEINQAAIDSRKGITLKPIIKI 193

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 90.0 bits (222), Expect = 3e-22
 Identities = 42/180 (23%), Positives = 69/180 (38%), Gaps = 16/180 (8%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHE 71
           KA  A+ A +PL   D+    P   +V+I+I Y  +C +DL+   S+    ++P + GHE
Sbjct: 2   KAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHE 61

Query: 72  AAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADG 130
             G V +VG+ V     GD V +      C  C  C   + N C              D 
Sbjct: 62  IVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYC--------------DH 107

Query: 131 QSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP-LAPLDKVCILSCGVSTGLGATLN 189
            +    +  P         +S+  VVH   V +I      + +   ++      L   + 
Sbjct: 108 MTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRVADIEMIRADQINEAYERMLRGDVK 167

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 184

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 79.9 bits (196), Expect = 2e-18
 Identities = 36/201 (17%), Positives = 70/201 (34%), Gaps = 28/201 (13%)

Query: 9   LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIF 68
           L   A V  +  +PL+ ++ E++      + ++I    +C +D++ +  +      P I 
Sbjct: 3   LKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIIL 62

Query: 69  GHEAAGVVESVGEGVSDLEVGD-----HVLPVFTGECGDCRHCRSDV-SNMCDLLRINPV 122
           GHE AG V  V     DL          ++      CG+C  C+      +C   ++  +
Sbjct: 63  GHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGI 122

Query: 123 RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG-CVAKINPLAPLDKVCILSCGVS 181
                  G S +        H  G   +S + V+     V K++          L     
Sbjct: 123 NR-----GCSEYP-------HLRG--CYSSHIVLDPETDVLKVSEKITHRLP--LKEAN- 165

Query: 182 TGLGATLNVAKPERGSSVAVF 202
                 L + +      V ++
Sbjct: 166 ----KALELMESREALKVILY 182

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 78.8 bits (193), Expect = 5e-18
 Identities = 50/196 (25%), Positives = 78/196 (39%), Gaps = 30/196 (15%)

Query: 10  TCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIF 68
           T KAAV    G PL I++V+V  P   +V +KI+ + +C TDL+  E      P  P I 
Sbjct: 5   TMKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIP 64

Query: 69  GHEAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVML 127
           GHE  G V +VG GV+ ++ GD V +P     CG C HC +    +C+            
Sbjct: 65  GHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCE------------ 112

Query: 128 ADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGAT 187
                      +    +     ++EY +     V  +    P +    +  G    +   
Sbjct: 113 ----------SQQNTGYSVNGGYAEYVLADPNYVGIL----PKNVKATIHPGKLDDINQI 158

Query: 188 LNVAK--PERGSSVAV 201
           L+  +     G  V  
Sbjct: 159 LDQMRAGQIEGRIVLE 174

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 78.4 bits (192), Expect = 6e-18
 Identities = 47/166 (28%), Positives = 76/166 (45%), Gaps = 6/166 (3%)

Query: 169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR 228
           PL+   +++  ++TG      +A  E GSSV V G+GAVGL    GA++ GA RIIGV  
Sbjct: 2   PLENAVMITDMMTTGFHG-AELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGS 60

Query: 229 SSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHD 288
                E AK +G TD +N  ++     +V+      GVDR +   G  + +  A + V  
Sbjct: 61  RPICVEAAKFYGATDILNY-KNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKP 119

Query: 289 GWGVAVLVGVPSKDAVFMTKPIN---VLNERTLKGTFFGNYKPRTD 331
           G G+   +         +   +     +  +T+KG      + R +
Sbjct: 120 G-GIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRLRAE 164

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 76.0 bits (186), Expect = 5e-17
 Identities = 31/188 (16%), Positives = 63/188 (33%), Gaps = 18/188 (9%)

Query: 18  EAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVE 77
           E  K       +  P    ++ IKI+   +C +D++           P + GHE  G V 
Sbjct: 16  EDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVV 75

Query: 78  SVG-EGVSDLEVGDH-VLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFS 135
            +G +  S L+VG    +      C +C  C++D    C                +   +
Sbjct: 76  KLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCT---------------KFVTT 120

Query: 136 INGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVAKPER 195
            +    + ++    ++ Y  VH   V  I     ++ + +   GV       +       
Sbjct: 121 YSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIWVETLPVGEAGVHEAFER-MEKGDVRY 179

Query: 196 GSSVAVFG 203
             ++  + 
Sbjct: 180 RFTLVGYD 187

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 75.8 bits (185), Expect = 6e-17
 Identities = 43/199 (21%), Positives = 75/199 (37%), Gaps = 33/199 (16%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE--------SKGQTPL 63
           +A    E GKPL +Q++ V  P+  +V IK++   +C +D++  +         +     
Sbjct: 2   RAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVK 61

Query: 64  FPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVR 123
            P   GHE AG +E VG+ V     GD V        G+C +CR    ++CD  R   + 
Sbjct: 62  LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGIN 121

Query: 124 GVMLADGQSRFSINGEPVNHFLGTSTFSEYTVV-HSGCVAKINPLAPLDKVCILSCGVST 182
                                     ++EY +V H   + K+  + P+    +     + 
Sbjct: 122 FDG----------------------AYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANE 159

Query: 183 GLGATLNVAKPERGSSVAV 201
            +    N      G  V +
Sbjct: 160 AIDNLENFKA--IGRQVLI 176

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 69.2 bits (168), Expect = 1e-14
 Identities = 39/173 (22%), Positives = 66/173 (38%), Gaps = 8/173 (4%)

Query: 170 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 229
           LD + +  C  +T   A     +   G +V + G G +GL     AR  GA  +I +  S
Sbjct: 3   LDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGS 62

Query: 230 SKRFEEAKKFGVTDFVNTSEH--DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH 287
             R + A++ G    +N  E   +   + ++      G D  +E TG+   ++   E + 
Sbjct: 63  PNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLR 122

Query: 288 DGWGVAVLVGVPSKDAVFMTKPIN--VLNERTLKGTFFGNYKPRTDLPSVVDM 338
            G G   + GV         K     VL   T KG +  +    +     V +
Sbjct: 123 RG-GFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSD---TSHFVKTVSI 171

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 68.1 bits (165), Expect = 3e-14
 Identities = 36/194 (18%), Positives = 73/194 (37%), Gaps = 26/194 (13%)

Query: 13  AAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWES---KGQTPLFPRIFG 69
           +AV ++    L ++   +  P+  EV +++ Y  +C +D++++E           P + G
Sbjct: 4   SAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIG 62

Query: 70  HEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLAD 129
           HEA+G V  VG+ V  L+ GD V       C  C+ C+    N+C               
Sbjct: 63  HEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCP-------------- 108

Query: 130 GQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN 189
                  +             + Y V  +    K+     + ++   S  +   + A   
Sbjct: 109 -------DLTFCATPPDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVDA-FE 160

Query: 190 VAKPERGSSVAVFG 203
            A+ +  +++ V  
Sbjct: 161 AARKKADNTIKVMI 174

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 67.0 bits (162), Expect = 6e-14
 Identities = 40/194 (20%), Positives = 65/194 (33%), Gaps = 28/194 (14%)

Query: 12  KAAVAWEAGKPLIIQDVEV-APPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGH 70
           KAA   E  KPL I+DV+        +V ++I    +C TDL+  +      L P++   
Sbjct: 1   KAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYT 60

Query: 71  EAAGVVESV---GEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVML 127
                V  +    EGV  LE GD V+       G C  CR+     C+            
Sbjct: 61  LGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCE------------ 108

Query: 128 ADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGAT 187
                     G  ++       F+E+       V K+     ++        ++  L   
Sbjct: 109 -----NLEFPGLNIDGG-----FAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERL 158

Query: 188 LNVAKPERGSSVAV 201
                   G +V +
Sbjct: 159 EKGEVL--GRAVLI 170

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 66.5 bits (161), Expect = 9e-14
 Identities = 51/196 (26%), Positives = 76/196 (38%), Gaps = 32/196 (16%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWE-SKGQTPLFPRIFGH 70
           KAAV  +  +PL I++VE       EV ++IK   +C TDL+         P  P I GH
Sbjct: 2   KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGH 61

Query: 71  EAAGVVESVGEGVSDLEVGDHV-LPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLAD 129
           E  G+VE VG GV+ L+VGD V +P     CG C +C S    +C               
Sbjct: 62  EGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLC--------------- 106

Query: 130 GQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCI--LSCGVSTGLGAT 187
                    +    +     ++EY    +  V KI     ++   +  ++      L   
Sbjct: 107 -------EHQKNAGYSVDGGYAEYCRAAADYVVKIPDNTIIEVQPLEKINEVFDRMLKGQ 159

Query: 188 LNVAKPERGSSVAVFG 203
           +N      G  V    
Sbjct: 160 IN------GRVVLTLE 169

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 63.0 bits (152), Expect = 1e-12
 Identities = 32/166 (19%), Positives = 73/166 (43%), Gaps = 9/166 (5%)

Query: 176 LSCGVSTGLGATLNVAKPER-GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE 234
           L+    T   A    A+    G+ VA+ G+G +G  A +  ++   + +I +D   ++ +
Sbjct: 12  LADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLK 71

Query: 235 EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAV 294
            A++ G    V+      P+++V+      GV+ +++  G+   +      +    G  +
Sbjct: 72  LAERLGADHVVDARRD--PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRM-GRLI 128

Query: 295 LVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYM 340
           +VG   +      + I   +E + +G+  GNY    +L  +V + +
Sbjct: 129 IVGYGGELRFPTIRVI--SSEVSFEGSLVGNYV---ELHELVTLAL 169

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 63.4 bits (153), Expect = 2e-12
 Identities = 39/218 (17%), Positives = 74/218 (33%), Gaps = 28/218 (12%)

Query: 12  KAAVAWEAGKPLIIQDVEV-------APPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLF 64
           +  V   +GK + +Q ++               V +K+  T++C +D +    +      
Sbjct: 3   RGVVYLGSGK-VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTAQ-V 60

Query: 65  PRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRG 124
             + GHE  G V   G  V +L++GD V   F   CG CR C+   + +C  +      G
Sbjct: 61  GLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGG 120

Query: 125 VMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHS--GCVAKINPLAPLDKVCILSCGVST 182
                    ++               +EY +V      + K+       +   ++  V  
Sbjct: 121 AYGYVDMGDWTG------------GQAEYVLVPYADFNLLKLPDRDKAMEKINIAEVVGV 168

Query: 183 GLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA 220
            + + L+ A    G     F  G       +  +   A
Sbjct: 169 QVIS-LDDAPRGYG----EFDAGVPKKFVIDPHKTFSA 201

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.2 bits (150), Expect = 3e-12
 Identities = 39/170 (22%), Positives = 66/170 (38%), Gaps = 12/170 (7%)

Query: 176 LSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE 235
           LS G+               G  V V G G +G+     A+  GA++++  D S+ R  +
Sbjct: 12  LSVGI-----HACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSK 66

Query: 236 AKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAV 294
           AK+ G    +  S+          E   G   + ++ECTG   ++ +       G G  V
Sbjct: 67  AKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLV 125

Query: 295 LVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVI 344
           LVG+ S+           + E  +KG F    +     P  + M  +K +
Sbjct: 126 LVGLGSEMTTVPLLHA-AIREVDIKGVF----RYCNTWPVAISMLASKSV 170

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 58.1 bits (139), Expect = 7e-11
 Identities = 36/179 (20%), Positives = 54/179 (30%), Gaps = 12/179 (6%)

Query: 166 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIG 225
           P   L  V  L C   T     L   +   G  V V G+G +G    + A   GA  +  
Sbjct: 2   PQEQLAAVAPLLCAGITTYSP-LRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAF 60

Query: 226 VDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFEC 285
               +KR E AK  G  + VN                    D  +       N+      
Sbjct: 61  TTSEAKR-EAAKALGADEVVN------SRNADEMAAHLKSFDFILNTVAAPHNLDDFTTL 113

Query: 286 VHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVI 344
           +    G   LVG P+           ++  R + G+  G      +   ++D      I
Sbjct: 114 LKRD-GTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGG---IPETQEMLDFCAEHGI 168

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.0 bits (139), Expect = 9e-11
 Identities = 30/198 (15%), Positives = 60/198 (30%), Gaps = 28/198 (14%)

Query: 14  AVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPL---FPRIFGH 70
           ++       L +++  +  P   EV +++    +C +D+++WE           P + GH
Sbjct: 10  SLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGH 69

Query: 71  EAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADG 130
           EA+G VE VG  V  L+ GD V         +   C+    N+   +             
Sbjct: 70  EASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDD---- 125

Query: 131 QSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNV 190
                                 +   ++    K+     +  +      +   L A    
Sbjct: 126 -----------------GNLCRFYKHNAAFCYKLPDN--VKPLVTHRFPLEKALEA-FET 165

Query: 191 AKPERGSSVAVFGLGAVG 208
            K   G  + +       
Sbjct: 166 FKKGLGLKIML-KCDPSD 182

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 56.9 bits (136), Expect = 2e-10
 Identities = 35/201 (17%), Positives = 57/201 (28%), Gaps = 29/201 (14%)

Query: 12  KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHE 71
           K        K L   + E     + +  ++    S C +D++             I GHE
Sbjct: 2   KGFAMLGINK-LGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHE 60

Query: 72  AAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQ 131
           A G V  VG  V D + GD V+   T         ++      +                
Sbjct: 61  AVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSN---------------- 104

Query: 132 SRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLNVA 191
               +             F EY  V+   +     LA L K   LS  V+       ++ 
Sbjct: 105 ---GMLAGWKFSNFKDGVFGEYFHVNDADMN----LAILPKDVDLSKLVTHVYHGFDHI- 156

Query: 192 KPERGSSVAVFGLGAVGLAAA 212
                 ++ +       L  A
Sbjct: 157 ----EEALLLMKDKPKDLIKA 173

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 56.4 bits (135), Expect = 5e-10
 Identities = 37/150 (24%), Positives = 56/150 (37%), Gaps = 20/150 (13%)

Query: 170 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS 229
           +  +  LS  + TG       A    GS+V V G G VGLAAA  AR+ GA+ +I  D +
Sbjct: 1   IRDLTCLSDILPTGYHG-AVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLN 59

Query: 230 SKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG-------------- 274
             R   AK  G      + +    + E IA +     VD +V+  G              
Sbjct: 60  PARLAHAKAQGFEIADLSLDTP--LHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHE 117

Query: 275 -NIDNMISAFECVHDGWGVAVLVGVPSKDA 303
                + S  +      G   + G+   + 
Sbjct: 118 APATVLNSLMQVTRVA-GKIGIPGLYVTED 146

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 131

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 44.0 bits (103), Expect = 3e-06
 Identities = 14/59 (23%), Positives = 21/59 (35%)

Query: 12 KAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGH 70
          KA V    G PL + D+     +  EV ++++   L   D         T L P     
Sbjct: 2  KAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPG 60

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 150

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.9 bits (102), Expect = 4e-06
 Identities = 24/107 (22%), Positives = 41/107 (38%), Gaps = 4/107 (3%)

Query: 12  KAAVAWEAGKPL---IIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIF 68
           +A   +E G P    +  D+ V  P+  +V IK+    +   + Y               
Sbjct: 4   RAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYT 63

Query: 69  -GHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMC 114
            G + AGV+E+VG+  S  + GD V    T   G   +  +    + 
Sbjct: 64  PGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVY 110

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 38.6 bits (88), Expect = 4e-04
 Identities = 20/183 (10%), Positives = 49/183 (26%), Gaps = 19/183 (10%)

Query: 8   ILTCKAAVAWEAGKP-----LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTP 62
           ++T +A +  + G+P         +++       EV +K   + +  +D+          
Sbjct: 1   MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQI------- 53

Query: 63  LFPRIFGHEAAGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV 122
                 G   +   ++ G G ++         +F            +  +      +N  
Sbjct: 54  -----QGVYPSKPAKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFG 108

Query: 123 RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAPLDKVCILSCGVST 182
                A G     I              +  T          +   PL ++       ++
Sbjct: 109 TWRTHALGNDDDFIKLPNPAQSKANGKPNGLTDAK-SIETLYDGTKPLHELYQDGVA-NS 166

Query: 183 GLG 185
             G
Sbjct: 167 KDG 169

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	361
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	100.0
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	100.0
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	100.0
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	100.0
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	100.0
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	100.0
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	100.0
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	100.0
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	100.0
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	100.0
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	100.0
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	100.0
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	100.0
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	100.0
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	100.0
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	100.0
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	99.97
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.97
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.97
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.97
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.96
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.96
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.96
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.95
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.95
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.95
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.95
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.95
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.95
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.95
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.95
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.95
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.94
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.94
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.94
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.94
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.93
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.93
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.93
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.93
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.92
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.92
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.92
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.92
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.92
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.91
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.9
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.9
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.9
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.89
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.85
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.82
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.64
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	99.63
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.45
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	98.13
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	98.12
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	97.88
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	97.69
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.66
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	97.61
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	97.58
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	97.56
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	97.49
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	97.48
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	97.35
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.34
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	97.34
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	97.3
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	97.3
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	97.28
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	97.28
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	97.25
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	97.23
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	97.21
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	97.2
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.16
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.16
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.12
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	97.12
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	97.1
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.1
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.09
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	97.07
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	97.06
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	97.06
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	97.04
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	97.04
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	97.03
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	97.03
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.0
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	97.0
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	96.98
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	96.97
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	96.96
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	96.96
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	96.94
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	96.94
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	96.92
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	96.91
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	96.89
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	96.89
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	96.88
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	96.85
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	96.85
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	96.85
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	96.83
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	96.83
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	96.82
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	96.8
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	96.8
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	96.8
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	96.79
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	96.79
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	96.76
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	96.76
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	96.73
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.72
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	96.72
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	96.69
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	96.69
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	96.69
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	96.68
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	96.67
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	96.67
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	96.66
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.66
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	96.64
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	96.63
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	96.62
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	96.59
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	96.59
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.57
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	96.57
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	96.55
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	96.52
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	96.5
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	96.5
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	96.49
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	96.44
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	96.43
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	96.36
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	96.34
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	96.34
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	96.31
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.26
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	96.24
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	96.23
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.23
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	96.2
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	96.19
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.18
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	96.12
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	96.05
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	95.93
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	95.87
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	95.81
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.75
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	95.74
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	95.68
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	95.64
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.56
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	95.53
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	95.52
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	95.51
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	95.36
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	95.31
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	95.25
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	95.24
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	95.21
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	95.2
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	95.17
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	95.17
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	95.16
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	95.14
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	95.13
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.07
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	95.05
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	95.04
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	95.04
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	94.96
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	94.94
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	94.85
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	94.85
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	94.81
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	94.78
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	94.75
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	94.73
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	94.73
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	94.65
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	94.63
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.59
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	94.52
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	94.43
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	94.43
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	94.42
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	94.4
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	94.36
d1iy9a_	274	Spermidine synthase {Bacillus subtilis [TaxId: 142	94.33
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	94.23
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	94.16
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	94.11
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	94.01
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	93.96
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	93.95
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	93.92
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	93.88
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.87
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	93.86
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	93.84
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	93.77
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	93.69
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	93.69
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	93.69
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	93.68
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	93.68
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	93.68
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	93.67
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	93.67
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	93.6
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	93.6
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	93.59
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	93.5
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	93.43
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	93.39
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	93.39
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	93.38
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	93.38
d1uira_	312	Spermidine synthase {Thermus thermophilus [TaxId:	93.32
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	93.26
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	93.2
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	93.2
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	93.12
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	93.11
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	93.0
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	92.99
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	92.95
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	92.92
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.92
d2fcaa1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil	92.81
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	92.78
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	92.77
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	92.72
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	92.7
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	92.69
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	92.66
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	92.58
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	92.56
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	92.56
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	92.54
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	92.42
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	92.39
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	92.34
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	92.33
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	92.31
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	92.21
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	92.1
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	92.07
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	92.07
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	92.06
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	92.0
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	91.99
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	91.99
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	91.96
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	91.96
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	91.93
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	91.93
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	91.82
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	91.81
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	91.75
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	91.67
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	91.64
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	91.64
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	91.63
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	91.57
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	91.57
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	91.54
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	91.23
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	91.23
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	91.19
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	91.07
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	91.06
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	91.06
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	91.04
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	91.04
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	91.0
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	90.99
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	90.92
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.89
d1y7la1	310	O-acetylserine sulfhydrylase (Cysteine synthase) {	90.88
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	90.86
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	90.8
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	90.67
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	90.63
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	90.57
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	90.56
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	90.55
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	90.54
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	90.51
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	90.48
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	90.27
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	90.27
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	90.24
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	90.17
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	90.0
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	89.99
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	89.9
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	89.89
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	89.8
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	89.61
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	89.58
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	89.54
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	89.45
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	89.43
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	89.42
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	89.31
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	89.25
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	89.22
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	89.1
d3lada1	229	Dihydrolipoamide dehydrogenase {Azotobacter vinela	89.06
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	88.99
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	88.96
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	88.79
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	88.74
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	88.72
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	88.64
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	88.57
d1jqea_	280	Histamine methyltransferase {Human (Homo sapiens)	88.52
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	88.35
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	88.3
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	88.24
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	87.96
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	87.94
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	87.88
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	87.85
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	87.84
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	87.83
d1sqga2	284	Ribosomal RNA small subunit methyltransferase B, R	87.75
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	87.71
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	87.56
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	87.48
d1fcja_	302	O-acetylserine sulfhydrylase (Cysteine synthase) {	87.07
d1h6va1	235	Mammalian thioredoxin reductase {Rat (Rattus norve	87.01
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	86.96
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	86.93
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	86.83
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	86.74
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	86.68
d1vlma_	208	Possible histamine N-methyltransferase TM1293 {The	86.66
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	86.54
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	86.15
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	86.12
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	86.07
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	85.93
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	85.54
d1qzza2	256	Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu	85.33
d1z7wa1	320	O-acetylserine sulfhydrylase (Cysteine synthase) {	85.32
d2gmha1	380	Electron transfer flavoprotein-ubiquinone oxidored	85.24
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	85.2
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	85.2
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	85.2
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	85.15
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	85.08
d1p3ha_	99	Chaperonin-10 (GroES) {Mycobacterium tuberculosis	85.06
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	85.04
d2bs2a2	336	Fumarate reductase {Wolinella succinogenes [TaxId:	84.97
d1onfa1	259	Glutathione reductase {Plasmodium falciparum [TaxI	84.97
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	84.9
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	84.79
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	84.69
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	84.6
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	84.58
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	84.42
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	84.41
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	84.39
d1u8fo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	84.26
d1tdja1	331	Threonine deaminase {Escherichia coli [TaxId: 562]	84.2
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	84.09
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	83.98
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	83.74
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	83.72
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	83.63
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	83.54
d2nvwa1	237	Galactose/lactose metabolism regulatory protein GA	83.21
d3cmco1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	82.58
d1wkva1	382	O-acetylserine sulfhydrylase (Cysteine synthase) {	82.57
d2cula1	230	GidA-related protein TTHA1897 {Thermus thermophilu	82.38
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	82.13
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	81.98
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	81.85
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	81.81
d2dula1	375	N(2),N(2)-dimethylguanosine tRNA methyltransferase	81.49
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	81.45
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	81.37
d1aoga1	238	Trypanothione reductase {Trypanosoma cruzi [TaxId:	81.3
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	81.19
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	80.79
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	80.37
d1mo9a1	261	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	80.37
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	80.31
d1feca1	240	Trypanothione reductase {Crithidia fasciculata [Ta	80.31
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	80.16
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	80.11

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=100.00  E-value=6.5e-39  Score=276.77  Aligned_cols=195  Identities=42%  Similarity=0.690  Sum_probs=174.5

Q ss_pred             cccceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCC
Q 018072            7 LILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDL   86 (361)
Q Consensus         7 ~~~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~   86 (361)
                      -++|+||+++++++++++++|++.|+|+++||||||.++|||++|++.+.+......+|.++|||++|+|+++|+++++|
T Consensus         5 ~~~~~kAav~~~~~~pl~i~ev~~P~p~~~eVlIkv~a~giCgsD~~~~~g~~~~~~~p~i~GhE~~G~v~~vG~~v~~~   84 (199)
T d1cdoa1           5 KVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGIVESVGPGVTEF   84 (199)
T ss_dssp             SCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCTTSCSEECCCCEEEEEEEECTTCCSC
T ss_pred             CceEEEEEEEecCCCCcEEEEEECCCCCCCEEEEEEEEEEEecchhhhhhhcccccccccccccccceEEEEEcCCCcee
Confidence            46788899999999999999999999999999999999999999999999977777889999999999999999999999


Q ss_pred             CCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCC
Q 018072           87 EVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINP  166 (361)
Q Consensus        87 ~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~  166 (361)
                      ++||||++.+..+|+.|++|++++++.|.+.......+.. ..+...+..+|.......+.|+||||++++++.+++||+
T Consensus        85 ~~GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~Ggfaey~~v~~~~~~~iP~  163 (199)
T d1cdoa1          85 QPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVM-SPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDP  163 (199)
T ss_dssp             CTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTT-SCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEECCT
T ss_pred             cCCCEEEEeeeccccccccccCCCcccccccccccccccc-cCcccceeeccceeecccccCCceEEEEEchHHEEECCC
Confidence            9999999999999999999999999999987766443433 444455555665556666678999999999999999999


Q ss_pred             CCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEE
Q 018072          167 LAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVF  202 (361)
Q Consensus       167 ~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~  202 (361)
                      +++++++|++.+++.|+++++....+.+.|++|||+
T Consensus       164 ~~~~~~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~  199 (199)
T d1cdoa1         164 SVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL  199 (199)
T ss_dssp             TSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            999999999999999999998777889999999984

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=100.00  E-value=6.6e-38  Score=269.66  Aligned_cols=194  Identities=45%  Similarity=0.781  Sum_probs=170.8

Q ss_pred             ccceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 018072            8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLE   87 (361)
Q Consensus         8 ~~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~   87 (361)
                      +++|||+++++++++|+++++|.|+|+++||||||+++|||++|++++.|.+....+|.++|||++|+|+++|+++++++
T Consensus         4 ~~~~kAav~~~~g~~l~i~evp~P~p~~~eVLVkv~a~gic~sD~~~~~G~~~~~~~p~v~GhE~~G~V~~vG~~V~~~~   83 (197)
T d2fzwa1           4 VIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTKLK   83 (197)
T ss_dssp             CEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTCCSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             ceEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEecCCCCcHHHHcCCcccccccccCCcceeeEEEeecCCceecC
Confidence            57899999999999999999999999999999999999999999999999877788999999999999999999999999


Q ss_pred             CCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072           88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  167 (361)
Q Consensus        88 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~  167 (361)
                      +||+|++.+..+|+.|..|..+.++.|.+.......|.. .+....+..+|.+...+.+.|+||||+++|+..++++|++
T Consensus        84 ~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~-~~~~~~~~~~g~~v~~~~g~GgfAey~vvp~~~~~~vp~~  162 (197)
T d2fzwa1          84 AGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPL  162 (197)
T ss_dssp             TTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCC-TTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCTT
T ss_pred             CCCEEEEccccccccccccccCccccCcccccccccccc-CCccceeccCCcceecccccccceeEEEechHHEEECCCC
Confidence            999999999999999999999999999886555332332 3444445556666666777789999999999999999999


Q ss_pred             CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEE
Q 018072          168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVF  202 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~  202 (361)
                      ++++++|.+++++.|++.++.....-+.+++|||+
T Consensus       163 l~~~~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi  197 (197)
T d2fzwa1         163 IKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI  197 (197)
T ss_dssp             SCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             CCHHHHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence            99999999999999999986444455788999884

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=100.00  E-value=9.1e-37  Score=264.13  Aligned_cols=195  Identities=38%  Similarity=0.709  Sum_probs=167.0

Q ss_pred             cccccceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCC
Q 018072            5 AGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVS   84 (361)
Q Consensus         5 ~~~~~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~   84 (361)
                      ..-++||||+++++++++++++++|.|+|+++||||||.++|||++|++++.|..+ ..+|.++|||++|+|+++|++++
T Consensus         3 ~~~~~~~KAaV~~~~g~pl~i~evp~P~p~~geVlVkv~a~gic~sD~~~~~G~~~-~~~P~v~GHE~~G~V~~vG~~V~   81 (202)
T d1e3ia1           3 QGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKK-ALFPVVLGHECAGIVESVGPGVT   81 (202)
T ss_dssp             TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTTSC-CCSSBCCCCEEEEEEEEECTTCC
T ss_pred             CCCeEEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEeccccceeeeecc-cccccccccccceEEeeecCCce
Confidence            34578999999999999999999999999999999999999999999999998664 56799999999999999999999


Q ss_pred             CCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCc---ccccccCCCcccccCCCccccccCcccceeeEEEeccce
Q 018072           85 DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPV---RGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCV  161 (361)
Q Consensus        85 ~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~---~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~  161 (361)
                      ++++||||++.+..+|+.|..|+.++++.|.+......   .+....++...+..+|....+..+.|+|+||+++|++.+
T Consensus        82 ~~~~GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~faey~~v~~~~l  161 (202)
T d1e3ia1          82 NFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANL  161 (202)
T ss_dssp             SCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGE
T ss_pred             eccCCCEEEEEeeccccccccccCCcccccccccccccCccceecccccccccccCceeeecccccCCceEEEEEehhhE
Confidence            99999999999999999999999999999998776511   111123334445566666666677799999999999999


Q ss_pred             EECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEc
Q 018072          162 AKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG  203 (361)
Q Consensus       162 ~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G  203 (361)
                      ++||++++++.++.+.+++.++++++ +  .+|+|++|.|+.
T Consensus       162 ~~lP~~~~~~~~~~~~~~~~~~~~a~-~--~~k~G~~V~vi~  200 (202)
T d1e3ia1         162 ARVDDEFDLDLLVTHALPFESINDAI-D--LMKEGKSIRTIL  200 (202)
T ss_dssp             EECCTTSCGGGGEEEEEEGGGHHHHH-H--HHHTTCCSEEEE
T ss_pred             EECCCCCCHHHHHHHHHHHHHHHHHH-H--hCCCCCEEEEEE
Confidence            99999999998888888888888775 3  257899998863

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=100.00  E-value=1.8e-36  Score=259.77  Aligned_cols=191  Identities=27%  Similarity=0.514  Sum_probs=156.6

Q ss_pred             ccceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 018072            8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLE   87 (361)
Q Consensus         8 ~~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~   87 (361)
                      +.+|+|+++.+.+++|+++++|.|+|+++||||||.++|||++|++++.|.++ .++|+++|||++|+|+++|+++++|+
T Consensus         1 ~k~~~Aav~~~~g~~l~l~~v~~P~p~~geVlVkv~a~gic~sD~~~~~G~~~-~~~P~i~GHE~~G~V~~vG~~v~~~~   79 (194)
T d1f8fa1           1 LKDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP-VPLPAVLGHEGSGIIEAIGPNVTELQ   79 (194)
T ss_dssp             CEEEEEEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             CceeEEEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEEecCchHhhhhhccc-ccCCcccccceEEEeeecCccceeEc
Confidence            35799999999999999999999999999999999999999999999998765 56899999999999999999999999


Q ss_pred             CCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCccccc--CCCccccccCcccceeeEEEeccceEECC
Q 018072           88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSI--NGEPVNHFLGTSTFSEYTVVHSGCVAKIN  165 (361)
Q Consensus        88 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~--~g~~~~~~~~~G~~ae~v~v~~~~~~~iP  165 (361)
                      +||||+.. ..+|++|++|++++++.|++.......|.. .+|......  .+....++.+.|+|+||.+++..+++++|
T Consensus        80 vGDrVv~~-~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~-~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~~~~~~~ip  157 (194)
T d1f8fa1          80 VGDHVVLS-YGYCGKCTQCNTGNPAYCSEFFGRNFSGAD-SEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVT  157 (194)
T ss_dssp             TTCEEEEC-CCCCSSSHHHHTTCGGGCTTHHHHSSSSSC-SSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEEC
T ss_pred             cCceeeee-cccccCChhhhCCCcccccccccceecccc-ccceeeeecCCceeeccccccccccceeEEEehHHEEECC
Confidence            99999655 558999999999999999976443222332 333322221  22233445566899999999999999999


Q ss_pred             CCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEE
Q 018072          166 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGV  226 (361)
Q Consensus       166 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~  226 (361)
                      ++++++++                         ++|.|+|++|++|+|+|+.+|+.+|+++
T Consensus       158 ~~i~~~~~-------------------------~~i~g~g~~g~~aiq~a~~~g~~~iiaV  193 (194)
T d1f8fa1         158 KDFPFDQL-------------------------VKFYAFDEINQAAIDSRKGITLKPIIKI  193 (194)
T ss_dssp             TTCCGGGG-------------------------EEEEEGGGHHHHHHHHHHTSCSEEEEEC
T ss_pred             CCCCcccE-------------------------EEEeCcHHHHHHHHHHHHHcCCCEEEEe
Confidence            99876543                         3456789999999999999999778775

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=100.00  E-value=4.5e-37  Score=260.84  Aligned_cols=171  Identities=22%  Similarity=0.384  Sum_probs=152.8

Q ss_pred             eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCC---CCCCCcccccceeEEEEEeCCCCCCCC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESVGEGVSDLE   87 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~~G~~v~~~~   87 (361)
                      |.|++++++++ |+++++|+|+|+++||||||+++|||++|++++.+...   ..++|+++|||++|+|+++|+++++|+
T Consensus         2 ~maAVl~g~~~-l~~~e~~~P~~~~~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~Vv~vG~~v~~~~   80 (178)
T d1e3ja1           2 NLSAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLK   80 (178)
T ss_dssp             CEEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCSCC
T ss_pred             ceEEEEEcCCc-EEEEEeECCCCCCCEEEEEEEEEcccCchhhhhccCccccccccCCeeeccccceEEEecCcccCCCC
Confidence            34556778887 99999999999999999999999999999998876432   245789999999999999999999999


Q ss_pred             CCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072           88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  167 (361)
Q Consensus        88 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~  167 (361)
                      +||||++.+..+|+.|..|..++.+.|.+..+.   |....+                  |+||||+++|+++++++|++
T Consensus        81 ~GdrV~~~~~~~~~~c~~c~~g~~~~c~~~~~~---~~~~~~------------------G~~aey~~v~~~~~~~iP~~  139 (178)
T d1e3ja1          81 KGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFC---ATPPDD------------------GNLARYYVHAADFCHKLPDN  139 (178)
T ss_dssp             TTCEEEECCEECCSSSHHHHTTCGGGCTTCEET---TBTTBC------------------CSCBSEEEEEGGGEEECCTT
T ss_pred             CCCEEEECcccccCCccccccCCccccccccce---eccccc------------------cccceeeeecccceeeCCCC
Confidence            999999999999999999999999999987766   332222                  48999999999999999999


Q ss_pred             CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC
Q 018072          168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL  204 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~  204 (361)
                      ++++++|.+++++.|+|+++ +.+++++|++|+|+|+
T Consensus       140 ~~~~~aa~~~~~~~ta~~a~-~~~~~~~g~~VlVig~  175 (178)
T d1e3ja1         140 CNVKQLVTHSFKLEQTVDAF-EAARKKADNTIKVMIS  175 (178)
T ss_dssp             CCCGGGEEEEEEGGGHHHHH-HHHHHCCTTCSEEEEE
T ss_pred             CCHHHHHHHHhHHHHHHHHH-HHhCCCCCCEEEEEcc
Confidence            99999999999999999985 7889999999999975

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=1e-35  Score=251.76  Aligned_cols=173  Identities=29%  Similarity=0.398  Sum_probs=152.7

Q ss_pred             ccccceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCC
Q 018072            6 GLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVS   84 (361)
Q Consensus         6 ~~~~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~   84 (361)
                      ++|.||||+++.++|++++++++|.|.|+++||||||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|++++
T Consensus         1 ~~P~tMkA~v~~~~g~pl~l~evp~P~~~~~evlVkv~a~gic~~D~~~~~G~~~~~~~~P~i~GhE~~G~V~~~G~~v~   80 (175)
T d1llua1           1 TLPQTMKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEGVGYVAAVGSGVT   80 (175)
T ss_dssp             CCCSEEEEEEBCSTTSCCEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCC
T ss_pred             CcchhcEEEEEEeCCCCCEEEEeECCCCCCCEEEEEEEEecCcccchhhhccCccccccCCcCCCCcceEEEEEeCCCcc
Confidence            46899999999999999999999999999999999999999999999999987753 56899999999999999999999


Q ss_pred             CCCCCCEEeecCCC-CCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEE
Q 018072           85 DLEVGDHVLPVFTG-ECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAK  163 (361)
Q Consensus        85 ~~~~Gd~V~~~~~~-~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~  163 (361)
                      ++++||||++.+.. .|+.|..|+.++++.|.+....   |.. .                  .|+|+||++++++++++
T Consensus        81 ~~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~~---G~~-~------------------~gg~aey~~v~~~~~~~  138 (175)
T d1llua1          81 RVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNT---GYS-V------------------NGGYAEYVLADPNYVGI  138 (175)
T ss_dssp             SCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEEB---TTT-B------------------CCSSBSEEEECTTTSEE
T ss_pred             ccccCCEEEeccccccCCccccccCCccccccccccc---ccc-c------------------ccccceEEEechHHEEE
Confidence            99999999876544 7999999999999999987665   432 2                  24899999999999999


Q ss_pred             CCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEE
Q 018072          164 INPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVF  202 (361)
Q Consensus       164 iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~  202 (361)
                      +|++++++.++++.+++.|+++++ + +...+|++|||+
T Consensus       139 iPd~l~~~~a~~~~~~~~t~~~~~-~-~g~~~G~~VLVl  175 (175)
T d1llua1         139 LPKNVKATIHPGKLDDINQILDQM-R-AGQIEGRIVLEM  175 (175)
T ss_dssp             CCTTCCCCEEEECGGGHHHHHHHH-H-TTCCSSEEEEEC
T ss_pred             CCCCCChhHHHHHHhHHHHHHHHH-H-hCCCCCCEEEeC
Confidence            999999988888888888888764 4 344579999984

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=100.00  E-value=5.7e-37  Score=263.97  Aligned_cols=190  Identities=42%  Similarity=0.724  Sum_probs=158.1

Q ss_pred             ccceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 018072            8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLE   87 (361)
Q Consensus         8 ~~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~   87 (361)
                      ..||||+++++++++++++++|.|+|+++||||||.++|||++|++++.|.++ ..+|.++|||++|+|+++|+++.+++
T Consensus         6 ~~~~KAav~~~~g~~l~i~ev~~P~p~~~eVlVkv~a~gICgsDlh~~~G~~~-~~~P~i~GHE~~G~Vv~~G~~v~~~~   84 (198)
T d1p0fa1           6 DITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIP-SKFPVILGHEAVGVVESIGAGVTCVK   84 (198)
T ss_dssp             CEEEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred             ceEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEecccceeeeeccc-cccccccceeeeeeeeecCcccccCc
Confidence            57999999999999999999999999999999999999999999999998765 46899999999999999999999999


Q ss_pred             CCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072           88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  167 (361)
Q Consensus        88 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~  167 (361)
                      +||||++.+..+|+.|++|+++++++|.+.......|.. .++...+..+|.+.......|+|+||+.+++..++++|++
T Consensus        85 ~GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~g~faey~~v~~~~~~kip~~  163 (198)
T d1p0fa1          85 PGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLM-ADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPK  163 (198)
T ss_dssp             TTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSC-TTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEECTT
T ss_pred             CCCEEEEEeeccccccccccccccccchhhhcccccccc-CCCceeEeeCCeeccccCCCccceeeEEecHHHEEECCCC
Confidence            999999999999999999999999999987766333322 3333334555555555566789999999999999999999


Q ss_pred             CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHH
Q 018072          168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGL  209 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~  209 (361)
                      ++.+.++...+.+          ..++++++|||.|+|++|+
T Consensus       164 ~~~~~~~~~~~~~----------~~v~~~~~vlv~G~G~iGl  195 (198)
T d1p0fa1         164 INVNFLVSTKLTL----------DQINKAFELLSSGQGVRSI  195 (198)
T ss_dssp             SCGGGGEEEEECG----------GGHHHHHHHTTTSSCSEEE
T ss_pred             CCHHHHHHhhcch----------hhcCCCCEEEEECCCcceE
Confidence            9877655443332          2234555688889888775

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=100.00  E-value=2.9e-35  Score=253.76  Aligned_cols=193  Identities=45%  Similarity=0.734  Sum_probs=164.8

Q ss_pred             cccccceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCC
Q 018072            5 AGLILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVS   84 (361)
Q Consensus         5 ~~~~~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~   84 (361)
                      ...+++|||++++++++++++++++.|+|+++||||||.++|||++|++.+.|.++ .++|.++|||++|+|+++|++++
T Consensus         3 ~~~~~k~KAavl~~~~~~l~i~ev~~P~p~~~eVlVkV~a~giC~sDl~~~~G~~~-~~~P~i~GHE~~G~Vv~vG~~v~   81 (198)
T d2jhfa1           3 AGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLV-TPLPVIAGHEAAGIVESIGEGVT   81 (198)
T ss_dssp             TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSC-CCSSBCCCCSEEEEEEEECTTCC
T ss_pred             CCCceEEEEEEEecCCCCCEEEEEECCCCCCCEEEEEEEEEecccccceeecCCcc-cccceecccceeEEEEecCcccc
Confidence            34678999999999999999999999999999999999999999999999998665 56899999999999999999999


Q ss_pred             CCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEEC
Q 018072           85 DLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKI  164 (361)
Q Consensus        85 ~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~i  164 (361)
                      ++++||||++.+..+|+.|..|+.++.+.|.+.......|.. .++...+..+|.+...+...|+|+||+++|+.+++++
T Consensus        82 ~~~vGdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~G~fAEy~~v~~~~~~~~  160 (198)
T d2jhfa1          82 TVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKI  160 (198)
T ss_dssp             SCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSC-TTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEEC
T ss_pred             CcCCCCEEEEeeeecccccccccCCccceeccccccccCccc-cCccccccccCceeccCCCCCcccCeEEeCHHHeEEC
Confidence            999999999999999999999999999999998777544433 4455566777877777778899999999999999999


Q ss_pred             CCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEE
Q 018072          165 NPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVF  202 (361)
Q Consensus       165 P~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~  202 (361)
                      |+.++++.++....++.+...+   ...+++|++|+|+
T Consensus       161 p~~~~~e~l~~~~~~~~~v~~g---~~~l~~G~~VaVi  195 (198)
T d2jhfa1         161 DAAFALDPLITHVLPFEKINEG---FDLLRSGESIRTI  195 (198)
T ss_dssp             CTTSCCGGGEEEEEEGGGHHHH---HHHHHTTCCSEEE
T ss_pred             CCCCCHHHHHHHHHHHHhhhhC---CceeeCCCEEEEE
Confidence            9999887766554444433222   2336889999886

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-35  Score=250.80  Aligned_cols=172  Identities=19%  Similarity=0.278  Sum_probs=150.9

Q ss_pred             cceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCC---CCCCCcccccceeEEEEEeCCCCCC
Q 018072            9 LTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESVGEGVSD   85 (361)
Q Consensus         9 ~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~~G~~v~~   85 (361)
                      .+|+|++++++++ ++++++|+|+|+++||||||.++|||++|++++++...   ..++|+++|||++|+|+++|+++++
T Consensus         6 p~~~a~V~~gp~~-l~l~evp~P~p~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~   84 (185)
T d1pl8a1           6 PNNLSLVVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKH   84 (185)
T ss_dssp             CCCEEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCS
T ss_pred             CCCEEEEEeCCCe-EEEEEeECCCCCCCEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeeeeeeEEEeccceee
Confidence            4688999999988 99999999999999999999999999999999876432   3467999999999999999999999


Q ss_pred             CCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECC
Q 018072           86 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN  165 (361)
Q Consensus        86 ~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP  165 (361)
                      |++||||++.+..+|+.|++|+.|+++.|.+..+.   |....+                  |+|+||++++.+++++||
T Consensus        85 ~~~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~~---g~~~~~------------------G~~aey~~~~~~~~~~lP  143 (185)
T d1pl8a1          85 LKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFC---ATPPDD------------------GNLCRFYKHNAAFCYKLP  143 (185)
T ss_dssp             CCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEET---TBTTBC------------------CSCBSEEEEEGGGEEECC
T ss_pred             ecccccceecceeccccchhhccchhchhccceee---eccccc------------------ccceEEEEEchHHEEECC
Confidence            99999999999999999999999999999988776   332222                  489999999999999999


Q ss_pred             CCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCH
Q 018072          166 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGA  206 (361)
Q Consensus       166 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~  206 (361)
                      ++++++++++++  +.+++++ ++..++++|++||| |+|+
T Consensus       144 ~~~~~~~aa~~p--l~~a~~a-~~~~~~~~G~~VlI-g~GP  180 (185)
T d1pl8a1         144 DNVKPLVTHRFP--LEKALEA-FETFKKGLGLKIML-KCDP  180 (185)
T ss_dssp             TTCGGGEEEEEE--GGGHHHH-HHHHHTTCCSEEEE-ECCT
T ss_pred             CCCCHHHHHHHH--HHHHHHH-HHHhCCCCCCEEEE-EeCC
Confidence            999999887654  5677877 46788999999998 6665

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=100.00  E-value=5.7e-35  Score=245.85  Aligned_cols=166  Identities=28%  Similarity=0.390  Sum_probs=150.1

Q ss_pred             eEEEeecCCCCeEEEEeecCCC-CCCeEEEEEeEEecCccchhccccCCC---CCCCCcccccceeEEEEEeCCCCCCCC
Q 018072           12 KAAVAWEAGKPLIIQDVEVAPP-QAMEVRIKIKYTSLCRTDLYFWESKGQ---TPLFPRIFGHEAAGVVESVGEGVSDLE   87 (361)
Q Consensus        12 ~a~~~~~~~~~~~~~~~~~p~~-~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~~G~~v~~~~   87 (361)
                      ||+++.++|+++++++++.|++ .++||||||.++|||++|++++.|...   .+.+|+++|||++|+|+++|+++++++
T Consensus         1 kA~~~~~~g~pl~i~~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G~V~~vG~~v~~~~   80 (171)
T d1h2ba1           1 KAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLE   80 (171)
T ss_dssp             CEEEESSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCCSCC
T ss_pred             CEEEEEeCCCCCEEEEeeCCCCCCCCEEEEEEEecccceeeehccCCCcccccCCccccccceeeeeeeecccCCCCcCC
Confidence            7999999999999999999986 689999999999999999999888653   356899999999999999999999999


Q ss_pred             CCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072           88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  167 (361)
Q Consensus        88 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~  167 (361)
                      +||||++.+..+|+.|..|+++++++|.+..+.   |.. .                  .|+||||+++|.+.++++|++
T Consensus        81 ~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~~---g~~-~------------------~G~~aey~~v~~~~~~~iP~~  138 (171)
T d1h2ba1          81 KGDPVILHPAVTDGTCLACRAGEDMHCENLEFP---GLN-I------------------DGGFAEFMRTSHRSVIKLPKD  138 (171)
T ss_dssp             TTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCB---TTT-B------------------CCSSBSEEEECGGGEEECCTT
T ss_pred             CCCEEEEcCccCCCCcccccccccccccccccc---eee-c------------------ccccceeeeehhhcceecCCC
Confidence            999999999999999999999999999887665   432 2                  248999999999999999999


Q ss_pred             CChhhhhccccchhhhhhhhhhhcCCCCCCEEEE
Q 018072          168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAV  201 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI  201 (361)
                      ++++.++++.+++.|+|+++ +.+++ .|++|||
T Consensus       139 ~~~e~aa~~~~~~~ta~~al-~~~~~-~G~~VlI  170 (171)
T d1h2ba1         139 VRVEVDIHKLDEINDVLERL-EKGEV-LGRAVLI  170 (171)
T ss_dssp             CCCCEEEEEGGGHHHHHHHH-HTTCC-SSEEEEE
T ss_pred             CCHHHHHHHHhHHHHHHHHH-HhcCC-CCCEEEe
Confidence            99988888888999999996 56777 8999998

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=6.4e-35  Score=247.44  Aligned_cols=174  Identities=21%  Similarity=0.321  Sum_probs=147.7

Q ss_pred             ccceeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCC---
Q 018072            8 ILTCKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVS---   84 (361)
Q Consensus         8 ~~~m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~---   84 (361)
                      +++|||+++.++++++++++++.|+|+++||||||.++|||++|+++++|..+..++|+++|||++|+|+++|++|+   
T Consensus         2 ~~k~kA~v~~~~~~pl~i~ev~~P~~~~~evlVkv~a~gIC~sD~~~~~G~~~~~~~P~vlGHE~~G~V~~vG~~v~~~~   81 (184)
T d1vj0a1           2 GLKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVNGEKRDLN   81 (184)
T ss_dssp             CEEEEEEEBCSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEESSCCBCTT
T ss_pred             CceEEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEECCCCCchhheeccCCccccccccceeeeeeeeEEeccccccc
Confidence            58899999999999999999999999999999999999999999999999887778999999999999999999986   


Q ss_pred             --CCCCCCEEeecCCCCCCCCccccCCCC-CCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEe-ccc
Q 018072           85 --DLEVGDHVLPVFTGECGDCRHCRSDVS-NMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVH-SGC  160 (361)
Q Consensus        85 --~~~~Gd~V~~~~~~~c~~c~~c~~~~~-~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~-~~~  160 (361)
                        .+++||+|++.+..+|+.|.+|+.|++ +.|.++...   |+..  +...+         ..-.|+||||++++ ..+
T Consensus        82 ~~~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~~---G~~~--~~~~~---------~~~~Gg~ae~~~v~~~~~  147 (184)
T d1vj0a1          82 GELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVY---GINR--GCSEY---------PHLRGCYSSHIVLDPETD  147 (184)
T ss_dssp             SCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEET---TTTC--CSSST---------TCCCSSSBSEEEECTTCC
T ss_pred             cccccceeeeEeccccccccChhHhCccccccCCCceee---ccCC--CCCCC---------CCcceeCcCcEEechhHc
Confidence              468999999999999999999999985 568887766   4320  00000         11235999999996 578


Q ss_pred             eEECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEE
Q 018072          161 VAKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVF  202 (361)
Q Consensus       161 ~~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~  202 (361)
                      ++++|++++.++      ++.+|+++ .+.+++++|++|||+
T Consensus       148 v~~ip~~l~~~~------pl~~A~~a-~~~~~~~~G~~VlI~  182 (184)
T d1vj0a1         148 VLKVSEKITHRL------PLKEANKA-LELMESREALKVILY  182 (184)
T ss_dssp             EEEECTTCCEEE------EGGGHHHH-HHHHHHTSCSCEEEE
T ss_pred             EEECCCCCCHHH------HHHHHHHH-HHHhCCCcCCEEEEe
Confidence            999999998653      46678887 477899999999997

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.6e-34  Score=245.67  Aligned_cols=180  Identities=17%  Similarity=0.229  Sum_probs=152.2

Q ss_pred             cccceeEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCC-
Q 018072            7 LILTCKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGV-   83 (361)
Q Consensus         7 ~~~~m~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v-   83 (361)
                      +|.+|||+++.++++.  +++++++.++++++||||||.++|||++|++++.|..+..++|+++|||++|+|+++|+++ 
T Consensus         3 ~P~~~ka~~~~~~~~~~~~~~~~~~p~p~~~~eVlVkv~a~giC~sDl~~~~g~~~~~~~P~i~GHE~~G~Vv~vG~~v~   82 (192)
T d1piwa1           3 YPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKSN   82 (192)
T ss_dssp             TTTCEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCCCSSEECCCCEEEEEEEECTTCC
T ss_pred             CCceeEEEEEeCCCcCCcceEeeccCCCCCCCeEEEEEeeeCCCcchHHHHcCCCCCCCCCcCcccccccchhhcccccc
Confidence            6999999999888764  7788887777899999999999999999999999987778899999999999999999988 


Q ss_pred             CCCCCCCEEeecCCC-CCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceE
Q 018072           84 SDLEVGDHVLPVFTG-ECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVA  162 (361)
Q Consensus        84 ~~~~~Gd~V~~~~~~-~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~  162 (361)
                      +.+++||||.+.+.. .|+.|..|+.++++.|.+........     ...+          ....|+||||+++|+++++
T Consensus        83 ~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~-----~~~G----------~~~~Ggfaey~~v~~~~~~  147 (192)
T d1piwa1          83 SGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQP-----YEDG----------YVSQGGYANYVRVHEHFVV  147 (192)
T ss_dssp             SSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCB-----CTTS----------CBCCCSSBSEEEEEGGGEE
T ss_pred             cccCCCCeeeEeeeccCCCCchhhhcCCcccccccccccccc-----cccc----------cccccceeeEEEeehHHeE
Confidence            569999999877655 79999999999999999876552110     0111          2223599999999999999


Q ss_pred             ECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEE
Q 018072          163 KINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVF  202 (361)
Q Consensus       163 ~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~  202 (361)
                      ++|+++++++|+.+...+.|||+++ +++++++|++|||.
T Consensus       148 ~iP~~l~~e~Aal~~~~~~ta~~~l-~~~~vk~g~~Vvv~  186 (192)
T d1piwa1         148 PIPENIWVETLPVGEAGVHEAFERM-EKGDVRYRFTLVGY  186 (192)
T ss_dssp             ECCTTCCEEEEESSHHHHHHHHHHH-HHTCCSSEEEEECC
T ss_pred             ECCCCCCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEE
Confidence            9999999988877765578999985 67999999999974

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=100.00  E-value=3.7e-36  Score=253.86  Aligned_cols=171  Identities=19%  Similarity=0.133  Sum_probs=142.2

Q ss_pred             eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   90 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd   90 (361)
                      |||+++.++++ ++++|+|.|+|+++||||||+++|||++|++.+.+.....++|+++|||++|+|+++|+++++|++||
T Consensus         1 MKa~v~~~~~~-l~i~e~p~P~~~~~eVlIkv~a~gic~sD~~~~~~~~~~~~~P~i~GhE~~G~V~~vG~~v~~~~vGd   79 (177)
T d1jqba1           1 MKGFAMLGINK-LGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGSEVKDFKPGD   79 (177)
T ss_dssp             CEEEEEEETTE-EEEEECCCCCCCTTCEEEEEEEECCCHHHHHHHHHCTTCCCSSEECCCCEEEEEEEECTTCCSCCTTC
T ss_pred             CeEEEEEeCCC-eEEEEeeCCCCCCCEEEEEEEEEecCCCcccccccCCCCCCCCccCcceeeEEeeecccccceecCCC
Confidence            89999999998 99999999999999999999999999999988876566678899999999999999999999999999


Q ss_pred             EEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEec--cceEECCCCC
Q 018072           91 HVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHS--GCVAKINPLA  168 (361)
Q Consensus        91 ~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~--~~~~~iP~~~  168 (361)
                      ||++.+..+|++|++|++++.+.|.+......+|.                   ...|+|+||+++|.  .+++++|+++
T Consensus        80 rV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~-------------------~~~G~~aEy~~vp~a~~~l~~iP~~~  140 (177)
T d1jqba1          80 RVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSN-------------------FKDGVFGEYFHVNDADMNLAILPKDV  140 (177)
T ss_dssp             EEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTT-------------------TBCCSSBSSEEESSHHHHCEECCTTS
T ss_pred             cEEEeeeeccccccchhhhhhcccccccccccccC-------------------CCChhcCeeEEEEhhhCeEEECCCCc
Confidence            99999999999999999999999987654322221                   12358999999986  4699999999


Q ss_pred             ChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHH
Q 018072          169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAA  212 (361)
Q Consensus       169 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~  212 (361)
                      ++++++...   .+++.++        ++.++|+|+|++|+.++
T Consensus       141 ~~~~~~~~~---~~~~~~~--------~~~vlv~g~gp~gl~aa  173 (177)
T d1jqba1         141 DLSKLVTHV---YHGFDHI--------EEALLLMKDKPKDLIKA  173 (177)
T ss_dssp             CGGGGEEEE---EESGGGH--------HHHHHHHHHCCTTCSEE
T ss_pred             chHHHHHHH---HHHHHHh--------cCceEEECCCHHHhhee
Confidence            987765433   2233322        34477888888887554

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=100.00  E-value=2.5e-36  Score=260.14  Aligned_cols=191  Identities=20%  Similarity=0.260  Sum_probs=156.7

Q ss_pred             eeEEEeecCCCCeEEEEeecCCC-------CCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPP-------QAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGV   83 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~-------~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v   83 (361)
                      +||++++++++ ++++|+|.|++       .++||||||.++|||++|++++.|..+ .++|+++|||++|+|+++|++|
T Consensus         2 ~kA~v~~~~~~-le~~e~~~P~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~G~~~-~~~P~v~GHE~~G~Vv~vG~~V   79 (201)
T d1kola1           2 NRGVVYLGSGK-VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT-AQVGLVLGHEITGEVIEKGRDV   79 (201)
T ss_dssp             EEEEEEEETTE-EEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC-CCTTCBCCCCEEEEEEEECTTC
T ss_pred             cEEEEEeCCCc-eEEEEecCCcccCCCCCCCCCEEEEEEEEEEEcchhhhhhcCCcc-cccceeccceeeeeeecccccc
Confidence            79999999998 99999999965       469999999999999999999998765 5689999999999999999999


Q ss_pred             CCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEecc--ce
Q 018072           84 SDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG--CV  161 (361)
Q Consensus        84 ~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~--~~  161 (361)
                      ++|++||||++.+..+|++|++|++++++.|.+.......|...      +...      ....|+|+||+++|..  ++
T Consensus        80 ~~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g------~~~~------~~~~Gg~aeyv~vp~~~~~l  147 (201)
T d1kola1          80 ENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYG------YVDM------GDWTGGQAEYVLVPYADFNL  147 (201)
T ss_dssp             CSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBT------CTTS------CCBCCCSBSEEEESSHHHHC
T ss_pred             ccccccceeEEeeeeeccCChhhhCCCccccccccccccccccc------ccCC------CccccccccEEEeehHHCeE
Confidence            99999999999999999999999999999997765442222210      1000      1123699999999853  69


Q ss_pred             EECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC
Q 018072          162 AKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA  220 (361)
Q Consensus       162 ~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~  220 (361)
                      ++|||+.+..+++.+..++.++++++ .....+.++    +|+|++|++++|+||++|+
T Consensus       148 ~~iPd~~~~~~~~~~~~~~~~~~~a~-~~~~~~~g~----~g~G~vG~~~i~~ak~~GA  201 (201)
T d1kola1         148 LKLPDRDKAMEKINIAEVVGVQVISL-DDAPRGYGE----FDAGVPKKFVIDPHKTFSA  201 (201)
T ss_dssp             EECSCHHHHHHTCCHHHHHTEEEECG-GGHHHHHHH----HHHTCSCEEEECTTCSSCC
T ss_pred             EECCCCCChHHHHHHHHHHHHHHHHH-HhCCCCCeE----EeeCHHHHHHHHHHHHcCC
Confidence            99999877777777777888888874 445555553    5889999999999998885

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=100.00  E-value=1.6e-33  Score=238.52  Aligned_cols=167  Identities=26%  Similarity=0.404  Sum_probs=143.1

Q ss_pred             eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCC--------CCCCCcccccceeEEEEEeCCC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQ--------TPLFPRIFGHEAAGVVESVGEG   82 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~--------~~~~p~~~G~e~~G~V~~~G~~   82 (361)
                      |||++++++|+++++++++.|+|+++||||||.++|||++|+++++|.+.        ..++|+++|||++|+|+++|+.
T Consensus         1 MKA~~~~~~G~pl~i~dv~~P~p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~~G~V~~~g~~   80 (177)
T d1jvba1           1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDE   80 (177)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTT
T ss_pred             CeEEEEEeCCCCCEEEEeeCCCCCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceEEEEEeeeccC
Confidence            89999999999999999999999999999999999999999999988642        3468999999999999999999


Q ss_pred             CCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEecc-ce
Q 018072           83 VSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSG-CV  161 (361)
Q Consensus        83 v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~-~~  161 (361)
                      +++|++||||++.+..+|+.|..|++++++.|.+....   |.. .                  .|+||||++++.. .+
T Consensus        81 v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~~---g~~-~------------------~G~~aey~~vp~~~~~  138 (177)
T d1jvba1          81 VVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWL---GIN-F------------------DGAYAEYVIVPHYKYM  138 (177)
T ss_dssp             CCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEB---TTT-B------------------CCSSBSEEEESCGGGE
T ss_pred             ccccccCceEeeeeccccccccccccccccccCCccee---eec-c------------------ccccccEEEEEhHHeE
Confidence            99999999999999999999999999999999987665   322 1                  2499999999765 56


Q ss_pred             EECCCCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEE
Q 018072          162 AKINPLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAV  201 (361)
Q Consensus       162 ~~iP~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI  201 (361)
                      +++|+..+.+.|+.+..++.++++++ +..++ .|++|||
T Consensus       139 ~~~~~~~~~~~a~~~~~~~~~a~~~~-~~~~~-~G~~VlI  176 (177)
T d1jvba1         139 YKLRRVKPMITKTMKLEEANEAIDNL-ENFKA-IGRQVLI  176 (177)
T ss_dssp             EECSSSCCCCEEEEEGGGHHHHHHHH-HTTCC-CSEEEEE
T ss_pred             EECCCCChHHHHHHHHHHHHHHHHHH-Hhhcc-cCCceEC
Confidence            67776665555555556888999885 55666 5899987

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=100.00  E-value=1.2e-32  Score=231.91  Aligned_cols=168  Identities=30%  Similarity=0.415  Sum_probs=143.3

Q ss_pred             eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCC-CCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKG-QTPLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~-~~~~~p~~~G~e~~G~V~~~G~~v~~~~~G   89 (361)
                      |||+++++++++++++++|.|+|+++||||||+++|||++|++++.+.. ....+|.++|||++|+|+++|++++++++|
T Consensus         1 MkA~v~~~~g~pl~i~~v~~P~~~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~p~v~GhE~~G~Vv~vG~~v~~~~vG   80 (171)
T d1rjwa1           1 MKAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVG   80 (171)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCCTT
T ss_pred             CeEEEEecCCCCcEEEEeECCCCCCCeEEEEEEEeeccccceeeeecccccccccccccCCEEEEEEEEecccccCceee
Confidence            8999999999999999999999999999999999999999999887543 446789999999999999999999999999


Q ss_pred             CEEeecCCC-CCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCC
Q 018072           90 DHVLPVFTG-ECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLA  168 (361)
Q Consensus        90 d~V~~~~~~-~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~  168 (361)
                      |||++.+.. .|+.|..|..+..+.|.+....   |.. .                  .|+||||+++|+++++++|+++
T Consensus        81 drV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~-~------------------~G~~aey~~v~~~~~~~iP~~~  138 (171)
T d1rjwa1          81 DRVGIPWLYSACGHCDYCLSGQETLCEHQKNA---GYS-V------------------DGGYAEYCRAAADYVVKIPDNT  138 (171)
T ss_dssp             CEEEECSEEECCSCSHHHHTTCGGGCTTCEEB---TTT-B------------------CCSSBSEEEEEGGGCEECCTTC
T ss_pred             eEEeeccccccccccccccCCCcccccccccc---cee-c------------------cCccccceEecHHHEEECCCCC
Confidence            999876654 6899999999999999887665   432 2                  2489999999999999999999


Q ss_pred             ChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC
Q 018072          169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL  204 (361)
Q Consensus       169 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~  204 (361)
                      +++.|+ +. .+.++++++ ....+ +|++|||+|.
T Consensus       139 ~~e~A~-l~-~~~~~~~~~-~~~~~-~G~tVlViG~  170 (171)
T d1rjwa1         139 IIEVQP-LE-KINEVFDRM-LKGQI-NGRVVLTLED  170 (171)
T ss_dssp             CEEEEE-GG-GHHHHHHHH-HTTCC-SSEEEEECCC
T ss_pred             CHHHHH-HH-HHHHHHHHH-HhcCC-CCCEEEEeCC
Confidence            986654 44 456777664 33555 5999999984

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=1.1e-31  Score=226.73  Aligned_cols=166  Identities=24%  Similarity=0.313  Sum_probs=135.1

Q ss_pred             eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVGD   90 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd   90 (361)
                      |||++.++++++|+++|+|.|+|++|||||||.++|||++|++.+.|......+|+++|||++|+|+++|++|+++++||
T Consensus         1 m~a~~~~~~~~pl~i~ev~~P~pg~geVlVkv~a~gic~sDl~~~~g~~~~~~~P~i~GhE~~G~V~~vG~~V~~~~vGd   80 (179)
T d1uufa1           1 IKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGD   80 (179)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCCCSSBCCCCCEEEEEEEECTTCCSCCTTC
T ss_pred             CeEEEEccCCCCCEEEEecCCCCCCCEEEEEEEEECCCCCcceeeeeeeccccccccccccccccchhhccccccCCCCC
Confidence            89999999999999999999999999999999999999999999999877788999999999999999999999999999


Q ss_pred             EEeecCC-CCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCC
Q 018072           91 HVLPVFT-GECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP  169 (361)
Q Consensus        91 ~V~~~~~-~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~  169 (361)
                      +|.+.+. .+|++|..|+.+++++|.+...... +....             ......|+|+||+++|++++++||+...
T Consensus        81 rV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~-~~~~~-------------~~~~~~GgfaEy~~v~~~~~~~ip~~~~  146 (179)
T d1uufa1          81 LVGVGCIVDSCKHCEECEDGLENYCDHMTGTYN-SPTPD-------------EPGHTLGGYSQQIVVHERYVLRIRVADI  146 (179)
T ss_dssp             EEEECSEEECCSSSHHHHTTCGGGCTTCEETTT-SBCSS-------------TTSBCCCSSBSEEEEEGGGCEECCCCCE
T ss_pred             EEEEcccccccCccccccCcccccCCCcccccc-ccCCC-------------CCcccccccceEEEechHHEEECCCCCc
Confidence            9987764 4899999999999999998654311 10000             0012246999999999999999996643


Q ss_pred             hhhhhccccchhhhhhhhhhhcCCC
Q 018072          170 LDKVCILSCGVSTGLGATLNVAKPE  194 (361)
Q Consensus       170 ~~~aa~l~~~~~ta~~a~~~~~~~~  194 (361)
                      ..  +.. .++.++++++ .++.++
T Consensus       147 ~~--~~a-~~l~~a~~a~-~~a~v~  167 (179)
T d1uufa1         147 EM--IRA-DQINEAYERM-LRGDVK  167 (179)
T ss_dssp             EE--ECG-GGHHHHHHHH-HTTCSS
T ss_pred             Ch--hHh-chhHHHHHHH-HHhCcc
Confidence            22  222 2566788774 334443

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.97  E-value=4.5e-30  Score=216.58  Aligned_cols=172  Identities=33%  Similarity=0.511  Sum_probs=157.2

Q ss_pred             ChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCC
Q 018072          169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  248 (361)
Q Consensus       169 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~  248 (361)
                      +++.|+.++|++.|||+++++.+++++|++|+|+|+|++|++++|+|+.+|+.+|++++++++|+++++++|++++++++
T Consensus         2 P~e~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~~~   81 (174)
T d1f8fa2           2 PIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSK   81 (174)
T ss_dssp             CGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEETT
T ss_pred             CHHHHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCCCHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEEeCC
Confidence            46789999999999999998999999999999999999999999999999998889999999999999999999999988


Q ss_pred             CCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeecCCC
Q 018072          249 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYK  327 (361)
Q Consensus       249 ~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~~~~  327 (361)
                      +.+  +.+.+++++++++|+||||+|+++.++.+++.++++ |+++++|........+++...++ +++++.|++++++.
T Consensus        82 ~~~--~~~~i~~~t~gg~D~vid~~G~~~~~~~~~~~~~~~-G~i~~~G~~~~~~~~~~~~~~~~~k~~~i~Gs~~g~~~  158 (174)
T d1f8fa2          82 TQD--PVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL-GKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGS  158 (174)
T ss_dssp             TSC--HHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEE-EEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGGGSC
T ss_pred             CcC--HHHHHHHHcCCCCcEEEEcCCcHHHHHHHHhcccCc-eEEEEEeecCCCcccccCHHHHHHCCCEEEEEEecCCC
Confidence            766  899999999889999999999999999999999998 99999998765566667666655 99999999988877


Q ss_pred             cCCcHHHHHHHHHcCC
Q 018072          328 PRTDLPSVVDMYMNKV  343 (361)
Q Consensus       328 ~~~~~~~~~~~~~~~~  343 (361)
                      .+++++++++++++||
T Consensus       159 ~~~~~~~~~~l~~~Gk  174 (174)
T d1f8fa2         159 PKKFIPELVRLYQQGK  174 (174)
T ss_dssp             HHHHHHHHHHHHHTTS
T ss_pred             hHHHHHHHHHHHHcCC
Confidence            7788999999999986

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.97  E-value=2.1e-29  Score=212.24  Aligned_cols=173  Identities=44%  Similarity=0.770  Sum_probs=153.5

Q ss_pred             hhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCC
Q 018072          170 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE  249 (361)
Q Consensus       170 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~  249 (361)
                      |.+||++.|++.|+|+++++.+++++|++|+|+|+|++|++++|+|+++|+.+|++++++++|+++++++|+++++|+..
T Consensus         2 P~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~GaGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~~   81 (174)
T d1p0fa2           2 PLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKD   81 (174)
T ss_dssp             CGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGG
T ss_pred             HHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCCC
Confidence            56799999999999999889999999999999999999999999999999989999999999999999999999999877


Q ss_pred             CCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCCCcC
Q 018072          250 HDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPR  329 (361)
Q Consensus       250 ~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~  329 (361)
                      .+....+..+..+++++|++||++|++.+++.++..+.+++|+++++|.......+++++..++++++|.|+++|++. .
T Consensus        82 ~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~-~  160 (174)
T d1p0fa2          82 YDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGFK-G  160 (174)
T ss_dssp             CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTCEEEECSGGGCC-G
T ss_pred             chhHHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCccccccCHHHHhCCCEEEEEEeCCCC-H
Confidence            664456566666666999999999999999999998876338999999887777888877766789999999998864 4


Q ss_pred             CcHHHHHHHHHcCC
Q 018072          330 TDLPSVVDMYMNKV  343 (361)
Q Consensus       330 ~~~~~~~~~~~~~~  343 (361)
                      +|++++++++++||
T Consensus       161 ~d~~~lidl~~~gK  174 (174)
T d1p0fa2         161 EEVSRLVDDYMKKK  174 (174)
T ss_dssp             GGHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHcCC
Confidence            69999999999986

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=6.4e-30  Score=210.02  Aligned_cols=145  Identities=22%  Similarity=0.322  Sum_probs=130.5

Q ss_pred             ceeEEEeecCCCC--eEEE-EeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCCC
Q 018072           10 TCKAAVAWEAGKP--LIIQ-DVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSD   85 (361)
Q Consensus        10 ~m~a~~~~~~~~~--~~~~-~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~~   85 (361)
                      .|||++++++|.+  ++++ ++|.|+|+++||||||.++|||++|++.++|.++. ..+|.++|||++|+|+++|+++++
T Consensus         2 ~MkAv~~~~~G~p~~l~~~~~~~~P~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~~vG~~v~~   81 (150)
T d1yb5a1           2 LMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASA   81 (150)
T ss_dssp             EEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTTCTT
T ss_pred             ceeEEEEEccCCcceEEEEeecCCCCCCCCeEEEEEEEecCcccchhhhcCCcCccccccccCccceeeeeEeecceeec
Confidence            4999999988876  7774 68999999999999999999999999999987654 468999999999999999999999


Q ss_pred             CCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECC
Q 018072           86 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN  165 (361)
Q Consensus        86 ~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP  165 (361)
                      |++||||+..+..                                                .|+|+||++++++.++++|
T Consensus        82 ~~vGdrV~~~~~~------------------------------------------------~G~~ae~~~v~~~~~~~iP  113 (150)
T d1yb5a1          82 FKKGDRVFTSSTI------------------------------------------------SGGYAEYALAADHTVYKLP  113 (150)
T ss_dssp             CCTTCEEEESCCS------------------------------------------------SCSSBSEEEEEGGGEEECC
T ss_pred             cccCccccccccc------------------------------------------------ccccccccccccccccccc
Confidence            9999999854211                                                2489999999999999999


Q ss_pred             CCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEE
Q 018072          166 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVF  202 (361)
Q Consensus       166 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~  202 (361)
                      +++++++||+++++..|+|+++...+..+.|+++||+
T Consensus       114 ~~ls~~~Aa~~~~~~~ta~~~~~~~g~~~~G~~vliL  150 (150)
T d1yb5a1         114 EKLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL  150 (150)
T ss_dssp             TTCCCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             CCCCHHHHHHhhhhhhhehhhheEEcCcccCCEEEEC
Confidence            9999999999999999999998888899999999984

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.96  E-value=3.9e-29  Score=210.36  Aligned_cols=173  Identities=44%  Similarity=0.839  Sum_probs=151.2

Q ss_pred             ChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCC
Q 018072          169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  248 (361)
Q Consensus       169 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~  248 (361)
                      ++++||.++|++.|+|+++.+.+++++|++|+|+|+|++|++++|+|+++|+.+|++++.+++|+++++++|+++++++.
T Consensus         2 ~Le~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~   81 (174)
T d1e3ia2           2 NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPR   81 (174)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCCc
Confidence            46889999999999999988899999999999999999999999999999998999999999999999999999999876


Q ss_pred             CCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCCCc
Q 018072          249 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP  328 (361)
Q Consensus       249 ~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~  328 (361)
                      ..+.......+...++++|++|||+|++++++.+++++++++|+++++|.....  ..+++..++.+++|.|+++|++..
T Consensus        82 ~~~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~~~--~~i~~~~~~~~k~i~Gs~~Gs~~~  159 (174)
T d1e3ia2          82 ELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDE--MTIPTVDVILGRSINGTFFGGWKS  159 (174)
T ss_dssp             GCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSE--EEEEHHHHHTTCEEEECSGGGCCH
T ss_pred             cchhhhhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCCCc--cccchHHHhccCEEEEEEeeCCCh
Confidence            655445555556666699999999999999999999999832999999986644  444455555678999999999888


Q ss_pred             CCcHHHHHHHHHcCC
Q 018072          329 RTDLPSVVDMYMNKV  343 (361)
Q Consensus       329 ~~~~~~~~~~~~~~~  343 (361)
                      .++++++++++++||
T Consensus       160 ~~d~p~li~l~~~GK  174 (174)
T d1e3ia2         160 VDSVPNLVSDYKNKK  174 (174)
T ss_dssp             HHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHCcC
Confidence            889999999999986

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.96  E-value=2.9e-28  Score=205.67  Aligned_cols=174  Identities=49%  Similarity=0.818  Sum_probs=150.8

Q ss_pred             ChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCC
Q 018072          169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  248 (361)
Q Consensus       169 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~  248 (361)
                      ++++||.++|++.|+|+++.+.++++||++|||+|+|++|++++|+|+++|+.+|++++++++|+++++++|+++++++.
T Consensus         2 P~e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~GaGGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~~   81 (176)
T d2fzwa2           2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQ   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecchhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeCC
Confidence            46789999999999999988889999999999999999999999999999988999999999999999999999999987


Q ss_pred             CCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCC-CCceeecChhhhccccEEEEeeecCCC
Q 018072          249 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS-KDAVFMTKPINVLNERTLKGTFFGNYK  327 (361)
Q Consensus       249 ~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~-~~~~~~~~~~~~~~~~~l~g~~~~~~~  327 (361)
                      +.+++..+.++..+++++|+|||++|++..++.+...++++ |+++.++... ...........+++++++.|+++|++.
T Consensus        82 ~~~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g-~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~  160 (176)
T d2fzwa2          82 DFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG-WGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWK  160 (176)
T ss_dssp             GCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTT-TCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCC
T ss_pred             chhhHHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCC-ceeEEEEeeccccccccccHHHHHCCCEEEEEeeeCCc
Confidence            65555777777777779999999999988999999999986 8887775443 333344444555699999999999987


Q ss_pred             cCCcHHHHHHHHHcCC
Q 018072          328 PRTDLPSVVDMYMNKV  343 (361)
Q Consensus       328 ~~~~~~~~~~~~~~~~  343 (361)
                      ..++++++++++++||
T Consensus       161 ~~~d~~~li~l~~~GK  176 (176)
T d2fzwa2         161 SVESVPKLVSEYMSKK  176 (176)
T ss_dssp             HHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHcCC
Confidence            7889999999999986

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.96  E-value=3.1e-28  Score=205.29  Aligned_cols=173  Identities=37%  Similarity=0.703  Sum_probs=152.2

Q ss_pred             ChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCC
Q 018072          169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  248 (361)
Q Consensus       169 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~  248 (361)
                      ++++||.++|++.|+|+|+.+.+++++|++|+|+|+|++|++++|+|+..|+.+|+++|.+++|++.++++|+++++|+.
T Consensus         3 P~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~~   82 (176)
T d1d1ta2           3 PPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPK   82 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred             CHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECcc
Confidence            57899999999999999988889999999999999999999999999999988999999999999999999999999987


Q ss_pred             CCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCCC
Q 018072          249 EHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK  327 (361)
Q Consensus       249 ~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~  327 (361)
                      +.+. ..+.+.+++.+ |+|++||++|++..++.++..+.+++|+++++|.......+.+++..++++++++|+++|+..
T Consensus        83 ~~~~-~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~  161 (176)
T d1d1ta2          83 DSTK-PISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLK  161 (176)
T ss_dssp             GCSS-CHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCC
T ss_pred             ccch-HHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccccccCCCHHHHhCCCEEEEEEEeCCC
Confidence            6553 33455555544 999999999998888888887765449999999988777778877777789999999999988


Q ss_pred             cCCcHHHHHHHHHcC
Q 018072          328 PRTDLPSVVDMYMNK  342 (361)
Q Consensus       328 ~~~~~~~~~~~~~~~  342 (361)
                      .++|++++++++.++
T Consensus       162 ~~~dip~li~~~~~k  176 (176)
T d1d1ta2         162 SRDDVPKLVTEFLAK  176 (176)
T ss_dssp             HHHHHHHHHHHHTTT
T ss_pred             cHHHHHHHHHHHhCC
Confidence            889999999998764

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.95  E-value=2.9e-28  Score=205.11  Aligned_cols=170  Identities=31%  Similarity=0.503  Sum_probs=149.9

Q ss_pred             CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcC
Q 018072          168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  247 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~  247 (361)
                      +|+++|+.+++++.|+|+++ +.+++++|++|+|+|+|++|++++|+|+.+|+.+|++++++++|+++++++|+++++++
T Consensus         1 ip~e~A~~l~~~~~ta~~a~-~~a~~~~g~~VlI~GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~~   79 (174)
T d1jqba2           1 MPLENAVMITDMMTTGFHGA-ELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNY   79 (174)
T ss_dssp             SCHHHHHTTTTHHHHHHHHH-HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEECG
T ss_pred             CCHHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEEcCCcchhhhhhhhhcccccccccccchhhhHHHHHhhCccccccc
Confidence            47889999999999999995 77999999999999999999999999999999889999999999999999999999998


Q ss_pred             CCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhh---hccccEEEEeee
Q 018072          248 SEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN---VLNERTLKGTFF  323 (361)
Q Consensus       248 ~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~---~~~~~~l~g~~~  323 (361)
                      ++.+  +.+.+.+++++ ++|+|||++|+++.+++++++++++ |+++++|.......++++...   .++++++.|+.+
T Consensus        80 ~~~~--~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~-G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~  156 (174)
T d1jqba2          80 KNGH--IEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPG-GIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLC  156 (174)
T ss_dssp             GGSC--HHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCCSSSEEEEETTTTGGGTBCCEEEEBCC
T ss_pred             cchh--HHHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcC-CEEEEEeecCCCCcCcCcHhHHHHHhCccEEEEecC
Confidence            8766  88999999988 9999999999989999999999997 999999987766666654432   348899999887


Q ss_pred             cCCCcCCcHHHHHHHHHcCC
Q 018072          324 GNYKPRTDLPSVVDMYMNKV  343 (361)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~  343 (361)
                      +.+  +..+++++++++.||
T Consensus       157 ~~~--r~~~e~l~~li~~gk  174 (174)
T d1jqba2         157 PGG--RLRAERLRDMVVYNR  174 (174)
T ss_dssp             CCH--HHHHHHHHHHHHTTS
T ss_pred             CCC--cccHHHHHHHHHcCC
Confidence            664  356788889998875

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.95  E-value=1.1e-27  Score=202.11  Aligned_cols=175  Identities=46%  Similarity=0.867  Sum_probs=150.7

Q ss_pred             ChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCC
Q 018072          169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  248 (361)
Q Consensus       169 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~  248 (361)
                      ++++||.++|++.|+|+++.+.+++++||+|||+|+|++|++++|+++..|..+|++++++++|+++++++|+++++++.
T Consensus         2 Ple~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~GaGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~   81 (176)
T d2jhfa2           2 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECCCCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecC
Confidence            46789999999999999998999999999999999999999999999999988999999999999999999999999887


Q ss_pred             CCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCCCc
Q 018072          249 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP  328 (361)
Q Consensus       249 ~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~  328 (361)
                      +.++...+.++...++++|++||++|.+..++.++..+++++|+++..+...........+..+++++++.|+++|++..
T Consensus        82 ~~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~~  161 (176)
T d2jhfa2          82 DYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKS  161 (176)
T ss_dssp             GCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCCH
T ss_pred             CchhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCCCcccccccHHHHhCCCEEEEEEEeCCCH
Confidence            65544666666666669999999999999999999999986245555555554455555556666999999999998877


Q ss_pred             CCcHHHHHHHHHcCC
Q 018072          329 RTDLPSVVDMYMNKV  343 (361)
Q Consensus       329 ~~~~~~~~~~~~~~~  343 (361)
                      +++++++++++++||
T Consensus       162 ~~~~~~li~~~~~GK  176 (176)
T d2jhfa2         162 KDSVPKLVADFMAKK  176 (176)
T ss_dssp             HHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHCcC
Confidence            889999999999986

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=5e-28  Score=198.09  Aligned_cols=141  Identities=22%  Similarity=0.292  Sum_probs=123.0

Q ss_pred             eEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 018072           12 KAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (361)
Q Consensus        12 ~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~G   89 (361)
                      ++++|.++|.+  |++++.+.|+|+++||+|||++++||++|++++.|.++...+|.++|||++|+|+++|+++++|++|
T Consensus         2 ~~i~~~~~G~pe~l~~~e~~~P~p~~~eVlVkv~a~~in~~D~~~~~G~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vG   81 (147)
T d1qora1           2 TRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKAG   81 (147)
T ss_dssp             EEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCSCEEEEEEEECTTCCSCCTT
T ss_pred             eEEEEcccCCCceeEEEEecCCCCCCCEEEEEEEEecccceeeeeecCCCCCCcceeeeccccccceeeeeeeccccccc
Confidence            57889999987  9999999999999999999999999999999999988888899999999999999999999999999


Q ss_pred             CEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCC
Q 018072           90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP  169 (361)
Q Consensus        90 d~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~  169 (361)
                      |||+...                                                ...|+|+||+.++.+.++++|++++
T Consensus        82 drV~~~~------------------------------------------------~~~G~~ae~~~v~~~~~~~~P~~~~  113 (147)
T d1qora1          82 DRVVYAQ------------------------------------------------SALGAYSSVHNIIADKAAILPAAIK  113 (147)
T ss_dssp             CEEEESC------------------------------------------------CSSCCSBSEEEEEGGGEEECCTTSC
T ss_pred             ceeeeec------------------------------------------------cccccceeEEEEehHHeEEcCcccc
Confidence            9997321                                                1125899999999999999999998


Q ss_pred             hhhh--hccccchhhhhhhhhhhcCCCCCCEEEE
Q 018072          170 LDKV--CILSCGVSTGLGATLNVAKPERGSSVAV  201 (361)
Q Consensus       170 ~~~a--a~l~~~~~ta~~a~~~~~~~~~g~~VlI  201 (361)
                      ++++  +.++....++++++++ .++++|++|||
T Consensus       114 ~~~a~a~~~~~~~~~~~~~l~~-~~~~~G~~VLI  146 (147)
T d1qora1         114 VDVAEQQKYPLKDAQRAHEILE-SRATQGSSLLI  146 (147)
T ss_dssp             CCCCGGGEEEGGGHHHHHHHHH-TTCCCBCCEEE
T ss_pred             hHHHHHHHHHHHHHHHHHHHHH-hCCCCCCEEEe
Confidence            8754  4456666777777654 67999999998

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.95  E-value=6e-28  Score=198.70  Aligned_cols=148  Identities=17%  Similarity=0.160  Sum_probs=125.4

Q ss_pred             cceeEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCCC
Q 018072            9 LTCKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSD   85 (361)
Q Consensus         9 ~~m~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~~   85 (361)
                      .+|||+++.+++++  ++++++++|+|++|||||||.++|||++|++.+.|.++. ...|+++|||++|+|++  +.+..
T Consensus         2 ~~~KA~v~~~~~~~~~~~i~~v~~P~~~~~eVlVkV~a~gin~~D~~~~~g~~~~~~~~p~v~g~e~~G~v~~--~~~~~   79 (152)
T d1xa0a1           2 SAFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVS--SQHPR   79 (152)
T ss_dssp             CEEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEE--CCSSS
T ss_pred             CceEEEEEEecCCceEEEEEEccCCCCCCCEEEEEEEEeCCChHHHHHHhhcccccccccceeeeeeeeeeec--cCCCc
Confidence            46999999999886  558899999999999999999999999999998887654 56899999999999999  55678


Q ss_pred             CCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECC
Q 018072           86 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN  165 (361)
Q Consensus        86 ~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP  165 (361)
                      |++||+|+.....                          .       +          ....|+||||+++|++.++++|
T Consensus        80 ~~~g~~v~~~~~~--------------------------~-------~----------~~~~G~~aEy~~v~~~~~~~iP  116 (152)
T d1xa0a1          80 FREGDEVIATGYE--------------------------I-------G----------VTHFGGYSEYARLHGEWLVPLP  116 (152)
T ss_dssp             CCTTCEEEEESTT--------------------------B-------T----------TTBCCSSBSEEEECGGGCEECC
T ss_pred             cccCCEEEEecCc--------------------------c-------c----------cccCCCcceeeeehhhccccCC
Confidence            9999999854211                          0       0          1123599999999999999999


Q ss_pred             CCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEc
Q 018072          166 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFG  203 (361)
Q Consensus       166 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G  203 (361)
                      ++++ ++||+++++..|+|.++....+++ |++|||+|
T Consensus       117 ~~l~-~~aa~l~~a~~ta~~~~~~~~~~~-G~tVL~l~  152 (152)
T d1xa0a1         117 KGLE-RIAQEISLAELPQALKRILRGELR-GRTVVRLA  152 (152)
T ss_dssp             TTHH-HHEEEEEGGGHHHHHHHHHHTCCC-SEEEEECC
T ss_pred             CCCC-HHHHHHHHHHHHHHHHHHHhcCCC-CCEEEEcC
Confidence            9998 578889889999999888888886 99999975

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.2e-27  Score=201.48  Aligned_cols=166  Identities=21%  Similarity=0.298  Sum_probs=146.3

Q ss_pred             CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEc
Q 018072          168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  246 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~  246 (361)
                      +|+++||++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++|+++++++|+++++|
T Consensus         1 ls~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~vi~   79 (174)
T d1yb5a2           1 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFN   79 (174)
T ss_dssp             SCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEE
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCc-ccccccccccccccccccCcccccc
Confidence            5889999999999999999988899999999999997 9999999999999999 8999989999999999999999999


Q ss_pred             CCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeec
Q 018072          247 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFG  324 (361)
Q Consensus       247 ~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~  324 (361)
                      +++.+  +.+.+++.+++ ++|++||++|+ ..++.++++++++ |+++.+|... .  .++++..++ |++++.|++++
T Consensus        80 ~~~~~--~~~~i~~~t~~~g~d~v~d~~g~-~~~~~~~~~l~~~-G~iv~~G~~~-~--~~~~~~~~~~k~~~i~g~~~~  152 (174)
T d1yb5a2          80 HREVN--YIDKIKKYVGEKGIDIIIEMLAN-VNLSKDLSLLSHG-GRVIVVGSRG-T--IEINPRDTMAKESSIIGVTLF  152 (174)
T ss_dssp             TTSTT--HHHHHHHHHCTTCEEEEEESCHH-HHHHHHHHHEEEE-EEEEECCCCS-C--EEECTHHHHTTTCEEEECCGG
T ss_pred             ccccc--HHHHhhhhhccCCceEEeecccH-HHHHHHHhccCCC-CEEEEEecCC-C--CCCCHHHHHHCCCEEEEEEec
Confidence            98876  89999999887 89999999997 7899999999998 9999999654 3  444444444 99999999876


Q ss_pred             CCCcCCcHHHHHHHHHcC
Q 018072          325 NYKPRTDLPSVVDMYMNK  342 (361)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~  342 (361)
                      +. +++++++++++++++
T Consensus       153 ~~-~~~~~~~~~~~l~~g  169 (174)
T d1yb5a2         153 SS-TKEEFQQYAAALQAG  169 (174)
T ss_dssp             GC-CHHHHHHHHHHHHHH
T ss_pred             CC-CHHHHHHHHHHHHHH
Confidence            54 357888888888764

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.95  E-value=2.5e-27  Score=201.07  Aligned_cols=170  Identities=25%  Similarity=0.362  Sum_probs=148.3

Q ss_pred             hhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCC
Q 018072          170 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE  249 (361)
Q Consensus       170 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~  249 (361)
                      ++.+|.+.|+..|||+++.+..++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|+++++++.+
T Consensus         3 ~~~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~GaG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~   82 (182)
T d1vj0a2           3 LDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRE   82 (182)
T ss_dssp             HHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTT
T ss_pred             HHHHHHhhcHHHHHHHHHHHHhCCCCCCEEEEECCCccchhheecccccccccccccccccccccccccccceEEEeccc
Confidence            45788889999999999888889999999999999999999999999999888999999999999999999999999887


Q ss_pred             CC-ccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhh--hccccEEEEeeecC
Q 018072          250 HD-RPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPIN--VLNERTLKGTFFGN  325 (361)
Q Consensus       250 ~~-~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~--~~~~~~l~g~~~~~  325 (361)
                      .+ .+..+.+.+++++ ++|+|||++|++..++.++++++++ |+++++|.......+++++..  ++|++++.|++.++
T Consensus        83 ~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~-G~iv~~G~~~~~~~~~~~~~~~l~~k~l~i~G~~~~~  161 (182)
T d1vj0a2          83 TSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRG-GFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSD  161 (182)
T ss_dssp             SCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEE-EEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCCCC
T ss_pred             cchHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCC-CEEEEEeecCCCCccccccHHHHHHCCcEEEEEEeCC
Confidence            65 2345567777877 8999999999988999999999998 999999987656667766543  34999999998765


Q ss_pred             CCcCCcHHHHHHHHHcCC
Q 018072          326 YKPRTDLPSVVDMYMNKV  343 (361)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~  343 (361)
                         ++++++++++++++.
T Consensus       162 ---~~~~~~~~~~i~~~~  176 (182)
T d1vj0a2         162 ---TSHFVKTVSITSRNY  176 (182)
T ss_dssp             ---HHHHHHHHHHHHTCH
T ss_pred             ---HHHHHHHHHHHHHCh
Confidence               478999999988764

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.95  E-value=8e-28  Score=192.25  Aligned_cols=130  Identities=22%  Similarity=0.201  Sum_probs=117.0

Q ss_pred             eeEEEeecCCCCeEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCCCCCCC
Q 018072           11 CKAAVAWEAGKPLIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLEVG   89 (361)
Q Consensus        11 m~a~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~~~~~G   89 (361)
                      |||+++.++|+++++++++.|+|+++||+|||+++|||++|++.++|.++. ..+|+++|||++|+|           +|
T Consensus         1 MkA~~~~~~G~~l~~~e~~~p~p~~~eVlVkv~a~gin~~D~~~~~G~~~~~~~~P~v~G~E~~G~V-----------vG   69 (131)
T d1iz0a1           1 MKAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVV-----------EG   69 (131)
T ss_dssp             CEEEEECSTTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEE-----------TT
T ss_pred             CcEEEEccCCCCCEEEEccCCCCCCCEEEEEEEEEeccccccccccccccccccceeEeeeeeEEee-----------cc
Confidence            899999999999999999999999999999999999999999999987755 468999999999999           39


Q ss_pred             CEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCCCC
Q 018072           90 DHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPLAP  169 (361)
Q Consensus        90 d~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~~~  169 (361)
                      |+|+....                                                 .|+|+||++++++.++++|++++
T Consensus        70 d~V~~~~~-------------------------------------------------~G~~aey~~v~~~~~~~~P~~~~  100 (131)
T d1iz0a1          70 RRYAALVP-------------------------------------------------QGGLAERVAVPKGALLPLPEGRP  100 (131)
T ss_dssp             EEEEEECS-------------------------------------------------SCCSBSEEEEEGGGCEECCTTCC
T ss_pred             ceEEEEec-------------------------------------------------cCccceeeeeCHHHeEEccCCCC
Confidence            99974421                                                 24899999999999999999999


Q ss_pred             hhhhhccccchhhhhhhhhhhcCCCCCCEEEEE
Q 018072          170 LDKVCILSCGVSTGLGATLNVAKPERGSSVAVF  202 (361)
Q Consensus       170 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~  202 (361)
                      +++||.+++++.|||+++.+++  +.|++||++
T Consensus       101 ~~~aa~~~~~~~Ta~~al~~~g--~~g~tvl~l  131 (131)
T d1iz0a1         101 VVGPVFPFAEAEAAFRALLDRG--HTGKVVVRL  131 (131)
T ss_dssp             CEEEEEEGGGHHHHHHHTTCTT--CCBEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHHhcc--cCCCEEEEC
Confidence            9999999999999999987766  569999873

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.95  E-value=8e-27  Score=196.65  Aligned_cols=174  Identities=53%  Similarity=0.917  Sum_probs=145.2

Q ss_pred             ChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCC
Q 018072          169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  248 (361)
Q Consensus       169 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~  248 (361)
                      ++++||.++|++.|+|+++.+.+++++|++|+|+|+|++|+++++.++..|+.+|++++++++|++.++++|+++++|+.
T Consensus         2 P~e~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~~   81 (175)
T d1cdoa2           2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPN   81 (175)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGG
T ss_pred             CHHHHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEecCCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcCC
Confidence            56889999999999999988899999999999999999999999999999998999999999999999999999999987


Q ss_pred             CCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCCCc
Q 018072          249 EHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKP  328 (361)
Q Consensus       249 ~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~  328 (361)
                      +.+....+..+...++++|++||++|++.++..++.++++++++++..|... .......+..+++++++.|++.|++..
T Consensus        82 ~~~~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~-~~~~~~~~~~~~~~~~i~Gs~~G~~~~  160 (175)
T d1cdoa2          82 DHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTD-LHDVATRPIQLIAGRTWKGSMFGGFKG  160 (175)
T ss_dssp             GCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCS-SSCEEECHHHHHTTCEEEECSGGGCCH
T ss_pred             CcchhHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecC-CcccCccHHHHHCCcEEEEEEEeCCcH
Confidence            6653344444444455999999999998899999999887624445555544 333333334456899999999998877


Q ss_pred             CCcHHHHHHHHHcCC
Q 018072          329 RTDLPSVVDMYMNKV  343 (361)
Q Consensus       329 ~~~~~~~~~~~~~~~  343 (361)
                      +++++++++++++||
T Consensus       161 ~~d~~~~i~l~~~gK  175 (175)
T d1cdoa2         161 KDGVPKMVKAYLDKK  175 (175)
T ss_dssp             HHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHcCC
Confidence            889999999999986

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=8.3e-27  Score=195.82  Aligned_cols=169  Identities=22%  Similarity=0.358  Sum_probs=142.1

Q ss_pred             CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcC
Q 018072          168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  247 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~  247 (361)
                      +|+++||++. ++.+||+++ +++++++|++|+|+|+|++|++++|+|+.+|+.+|++++++++|+++++++|+++++++
T Consensus         1 vS~e~Aal~e-pla~a~~a~-~~~~~~~gd~VlI~G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~   78 (171)
T d1pl8a2           1 VTFEEGALIE-PLSVGIHAC-RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQI   78 (171)
T ss_dssp             SCHHHHHHHH-HHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred             CCHHHHHHHH-HHHHHHHHH-HHhCCCCCCEEEEECCCccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCcccccc
Confidence            4778888775 889999984 77899999999999999999999999999999899999999999999999999999998


Q ss_pred             CCCCcc-HHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeecC
Q 018072          248 SEHDRP-IQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGN  325 (361)
Q Consensus       248 ~~~~~~-~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~~  325 (361)
                      ...+.. ..+.+....+.++|++||++|++..++.++++++++ |+++++|.......++  ...++ |++++.|++.+ 
T Consensus        79 ~~~~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~g-G~iv~~G~~~~~~~~~--~~~~~~k~l~i~Gs~~~-  154 (171)
T d1pl8a2          79 SKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG-GTLVLVGLGSEMTTVP--LLHAAIREVDIKGVFRY-  154 (171)
T ss_dssp             SSCCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCCSCCCCC--HHHHHHTTCEEEECCSC-
T ss_pred             cccccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCC-CEEEEEecCCCCCccC--HHHHHHCCcEEEEEeCC-
Confidence            876621 222222333448999999999999999999999998 9999999877555544  44444 99999998632 


Q ss_pred             CCcCCcHHHHHHHHHcCCcc
Q 018072          326 YKPRTDLPSVVDMYMNKVIR  345 (361)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~l~  345 (361)
                         .++|+++++++++|+|+
T Consensus       155 ---~~~~~~al~li~~gkid  171 (171)
T d1pl8a2         155 ---CNTWPVAISMLASKSVN  171 (171)
T ss_dssp             ---SSCHHHHHHHHHTTSCC
T ss_pred             ---HhHHHHHHHHHHcCCCC
Confidence               47899999999999974

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.94  E-value=4e-27  Score=197.58  Aligned_cols=168  Identities=23%  Similarity=0.311  Sum_probs=149.3

Q ss_pred             CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEc
Q 018072          168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  246 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~  246 (361)
                      +++.+||.++|++.|||+++ ++.++++|++|+|+|+ |++|++++|+++..|..+|++++++++|+++++++|++++++
T Consensus         1 l~~~eAA~l~c~~~Ta~~al-~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~   79 (170)
T d1jvba2           1 LNAVEAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVIN   79 (170)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCceeec
Confidence            57899999999999999995 7789999999999996 999999999999999879999999999999999999999999


Q ss_pred             CCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecC
Q 018072          247 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGN  325 (361)
Q Consensus       247 ~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~  325 (361)
                      +.+.+  +.+.+++.+.+ ++|++||++|++..++.++++++++ |+++++|....+..++... .++|++++.|++.++
T Consensus        80 ~~~~~--~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~-G~iv~~G~~~~~~~~~~~~-~~~k~i~i~Gs~~~~  155 (170)
T d1jvba2          80 ASMQD--PLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQ-GKYVMVGLFGADLHYHAPL-ITLSEIQFVGSLVGN  155 (170)
T ss_dssp             TTTSC--HHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEE-EEEEECCSSCCCCCCCHHH-HHHHTCEEEECCSCC
T ss_pred             cCCcC--HHHHHHHHhhcccchhhhcccccchHHHhhhhhcccC-CEEEEeccccCccccCHHH-HHhCCcEEEEEecCC
Confidence            87766  78888888877 8999999999989999999999998 9999999876555555432 244999999998766


Q ss_pred             CCcCCcHHHHHHHHHcCC
Q 018072          326 YKPRTDLPSVVDMYMNKV  343 (361)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~  343 (361)
                         +++++++++++++||
T Consensus       156 ---~~d~~~~l~lv~~GK  170 (170)
T d1jvba2         156 ---QSDFLGIMRLAEAGK  170 (170)
T ss_dssp             ---HHHHHHHHHHHHTTS
T ss_pred             ---HHHHHHHHHHHHcCC
Confidence               488999999999986

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.94  E-value=2.5e-26  Score=193.05  Aligned_cols=164  Identities=21%  Similarity=0.333  Sum_probs=142.0

Q ss_pred             hhhhhccccchhhhhhhhhhhc-CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCC
Q 018072          170 LDKVCILSCGVSTGLGATLNVA-KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  248 (361)
Q Consensus       170 ~~~aa~l~~~~~ta~~a~~~~~-~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~  248 (361)
                      +.++|.+++++.|||+++.+.. .++||++|+|+|+|++|++++|+|+.+|+.+|++++++++|+++++++|+++++++.
T Consensus         6 l~eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~~   85 (172)
T d1h2ba2           6 LVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDAR   85 (172)
T ss_dssp             HHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETT
T ss_pred             HHHHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCCChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeecCc
Confidence            4688999999999999987655 489999999999999999999999999988999999999999999999999999987


Q ss_pred             CCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeecCC
Q 018072          249 EHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNY  326 (361)
Q Consensus       249 ~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~~~  326 (361)
                      ++   ..+.+.+.+.+ ++|+|||++|++..++.+++.++++ |+++++|... .  .+++...++ |++++.|++.++ 
T Consensus        86 ~~---~~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~-G~iv~~G~~~-~--~~~~~~~l~~k~~~i~Gs~~~~-  157 (172)
T d1h2ba2          86 RD---PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRM-GRLIIVGYGG-E--LRFPTIRVISSEVSFEGSLVGN-  157 (172)
T ss_dssp             SC---HHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEE-EEEEECCCSS-C--CCCCHHHHHHTTCEEEECCSCC-
T ss_pred             cc---HHHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCC-CEEEEEeCcc-c--ccCCHHHHHhCCcEEEEEEecC-
Confidence            54   44555666766 9999999999988999999999998 9999999644 3  344444444 999999998776 


Q ss_pred             CcCCcHHHHHHHHHcCC
Q 018072          327 KPRTDLPSVVDMYMNKV  343 (361)
Q Consensus       327 ~~~~~~~~~~~~~~~~~  343 (361)
                        +++++++++++++||
T Consensus       158 --~~d~~~~l~l~~~GK  172 (172)
T d1h2ba2         158 --YVELHELVTLALQGK  172 (172)
T ss_dssp             --HHHHHHHHHHHHTTS
T ss_pred             --HHHHHHHHHHHHcCC
Confidence              478999999999986

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.94  E-value=1e-25  Score=188.80  Aligned_cols=166  Identities=25%  Similarity=0.351  Sum_probs=138.7

Q ss_pred             CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcC
Q 018072          168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  247 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~  247 (361)
                      +|+++||++. ++.+||+++ +++++++|++|+|+|+|++|++++|+|+.+|+ +|++++++++|+++++++|++..++.
T Consensus         1 VS~e~Aal~e-Pla~a~~a~-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~Ga-~vi~v~~~~~r~~~a~~~ga~~~~~~   77 (170)
T d1e3ja2           1 VSLEEGALLE-PLSVGVHAC-RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVV   77 (170)
T ss_dssp             SCHHHHHTHH-HHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred             CCHHHHHHHH-HHHHHHHHH-HHhCCCCCCEEEEEcccccchhhHhhHhhhcc-cccccchHHHHHHHHHHcCCcEEEec
Confidence            4788988875 889999995 77899999999999999999999999999999 99999999999999999999987766


Q ss_pred             CCCCccH---HHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeee
Q 018072          248 SEHDRPI---QEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFF  323 (361)
Q Consensus       248 ~~~~~~~---~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~  323 (361)
                      +....+.   .+.+++..++++|+|||++|++..++.++++++++ |+++++|.......  ++...++ |++++.|++.
T Consensus        78 ~~~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~-G~iv~~G~~~~~~~--~~~~~~~~k~i~i~gs~~  154 (170)
T d1e3ja2          78 DPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG-GTLMLVGMGSQMVT--VPLVNACAREIDIKSVFR  154 (170)
T ss_dssp             CTTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTT-CEEEECSCCSSCCC--CCHHHHHTTTCEEEECCS
T ss_pred             cccccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcC-CceEEEecCCCCCC--cCHHHHHHCCCEEEEEEC
Confidence            5543233   34444445558999999999988999999999998 99999998764444  4444444 9999999863


Q ss_pred             cCCCcCCcHHHHHHHHHcCC
Q 018072          324 GNYKPRTDLPSVVDMYMNKV  343 (361)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~  343 (361)
                      +    .++|+++++++++||
T Consensus       155 ~----~~~~~~ai~li~~Gk  170 (170)
T d1e3ja2         155 Y----CNDYPIALEMVASGR  170 (170)
T ss_dssp             C----SSCHHHHHHHHHTTS
T ss_pred             C----HHHHHHHHHHHHcCC
Confidence            2    468999999999986

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.94  E-value=4.3e-26  Score=190.46  Aligned_cols=164  Identities=23%  Similarity=0.336  Sum_probs=142.6

Q ss_pred             CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcC
Q 018072          168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  247 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~  247 (361)
                      +++++||.++|++.|||+++ +++++++|++|+|+|+|++|++++|+|+.+|+ +|++++++++|+++++++|+++++++
T Consensus         1 v~f~~aA~l~ca~~Ta~~al-~~~~~~~g~~VlV~GaG~vG~~~~~~ak~~G~-~Vi~~~~~~~~~~~a~~~Ga~~~i~~   78 (166)
T d1llua2           1 VEFAEIAPILCAGVTVYKGL-KQTNARPGQWVAISGIGGLGHVAVQYARAMGL-HVAAIDIDDAKLELARKLGASLTVNA   78 (166)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEET
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeeccccHHHHHHHHHHcCC-ccceecchhhHHHhhhccCccccccc
Confidence            47899999999999999996 56899999999999999999999999999997 99999999999999999999999998


Q ss_pred             CCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeecCC
Q 018072          248 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNY  326 (361)
Q Consensus       248 ~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~~~  326 (361)
                      .+.+  +.+.++..+. ++|.+++++++++.++.++++++++ |+++.+|.......++  ...++ |++++.|++.++ 
T Consensus        79 ~~~~--~~~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~--~~~~~~k~~~i~Gs~~~~-  151 (166)
T d1llua2          79 RQED--PVEAIQRDIG-GAHGVLVTAVSNSAFGQAIGMARRG-GTIALVGLPPGDFPTP--IFDVVLKGLHIAGSIVGT-  151 (166)
T ss_dssp             TTSC--HHHHHHHHHS-SEEEEEECCSCHHHHHHHHTTEEEE-EEEEECCCCSSEEEEE--HHHHHHTTCEEEECCSCC-
T ss_pred             cchh--HHHHHHHhhc-CCcccccccccchHHHHHHHHhcCC-cEEEEEEecCCCccCC--HHHHHhCCcEEEEEeecC-
Confidence            8776  7777777655 5677777888889999999999997 9999999876544444  44444 999999998766 


Q ss_pred             CcCCcHHHHHHHHHcC
Q 018072          327 KPRTDLPSVVDMYMNK  342 (361)
Q Consensus       327 ~~~~~~~~~~~~~~~~  342 (361)
                        +++++++++++++|
T Consensus       152 --~~d~~e~l~l~~~G  165 (166)
T d1llua2         152 --RADLQEALDFAGEG  165 (166)
T ss_dssp             --HHHHHHHHHHHHTT
T ss_pred             --HHHHHHHHHHHHCc
Confidence              47899999999987

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.93  E-value=1.6e-26  Score=196.07  Aligned_cols=171  Identities=19%  Similarity=0.231  Sum_probs=147.0

Q ss_pred             hhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCC
Q 018072          171 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSE  249 (361)
Q Consensus       171 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~  249 (361)
                      +|||+++++++|||+++++.+++++|++|||+|+ |++|++++|+|+..|+ +|+++.++++++++++++|+++++++++
T Consensus         1 eeAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~-~vi~~~~~~~~~~~l~~~Ga~~vi~~~~   79 (183)
T d1pqwa_           1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSRLGVEYVGDSRS   79 (183)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHTTCCSEEEETTC
T ss_pred             CchhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccc-cceeeecccccccccccccccccccCCc
Confidence            4799999999999999999999999999999987 9999999999999999 8888889999999999999999999887


Q ss_pred             CCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCCC-
Q 018072          250 HDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYK-  327 (361)
Q Consensus       250 ~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~-  327 (361)
                      .+  +.+.+++++++ ++|++||++|+ +.++.++++|+++ |+++.+|..............+.+++++.++...... 
T Consensus        80 ~~--~~~~v~~~t~~~g~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (183)
T d1pqwa_          80 VD--FADEILELTDGYGVDVVLNSLAG-EAIQRGVQILAPG-GRFIELGKKDVYADASLGLAALAKSASFSVVDLDLNLK  155 (183)
T ss_dssp             ST--HHHHHHHHTTTCCEEEEEECCCT-HHHHHHHHTEEEE-EEEEECSCGGGTTTCEEEGGGGTTTCEEEECCHHHHHH
T ss_pred             cC--HHHHHHHHhCCCCEEEEEecccc-hHHHHHHHHhcCC-CEEEEEccCCCCCCcccchHHHhCCcEEEEEEccceec
Confidence            76  99999999987 99999999998 7899999999998 9999999765444444444445589999887643321 


Q ss_pred             -----cCCcHHHHHHHHHcCCccc
Q 018072          328 -----PRTDLPSVVDMYMNKVIRF  346 (361)
Q Consensus       328 -----~~~~~~~~~~~~~~~~l~~  346 (361)
                           .++.++++++++++|+|++
T Consensus       156 ~~~~~~~~~~~~v~~~i~~G~i~p  179 (183)
T d1pqwa_         156 LQPARYRQLLQHILQHVADGKLEV  179 (183)
T ss_dssp             HCHHHHHHHHHHHHHHHHTTSSCC
T ss_pred             cCHHHHHHHHHHHHHHHHCCCCce
Confidence                 1356788899999999975

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.93  E-value=2e-25  Score=186.61  Aligned_cols=167  Identities=25%  Similarity=0.422  Sum_probs=145.2

Q ss_pred             CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcC
Q 018072          168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  247 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~  247 (361)
                      +|+++||++++++.|||+++ +..+++||++|||+|+|++|++++|+|+..|+ +|++++++++|+++++++|++.++++
T Consensus         1 ls~eeAA~l~~~~~Ta~~al-~~~~~~~g~~vlv~G~G~iG~~a~~~a~~~g~-~v~~~~~~~~r~~~~k~~Ga~~~~~~   78 (168)
T d1rjwa2           1 LSFEEAAPIFCAGVTTYKAL-KVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNP   78 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeecccchhhhhHHHhcCCC-eEeccCCCHHHhhhhhhcCcceeccc
Confidence            58899999999999999996 56889999999999999999999999999999 89999999999999999999999998


Q ss_pred             CCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh-ccccEEEEeeecCC
Q 018072          248 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNY  326 (361)
Q Consensus       248 ~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~~~  326 (361)
                      .+.+  +.+.++..+++. |.+++++++++.++.++++++++ |+++++|.......++  ...+ ++++++.|++.++ 
T Consensus        79 ~~~~--~~~~~~~~~~~~-~~~v~~~~~~~~~~~a~~~l~~~-G~i~~~g~~~~~~~~~--~~~~~~~~~~i~gs~~~~-  151 (168)
T d1rjwa2          79 LKED--AAKFMKEKVGGV-HAAVVTAVSKPAFQSAYNSIRRG-GACVLVGLPPEEMPIP--IFDTVLNGIKIIGSIVGT-  151 (168)
T ss_dssp             TTSC--HHHHHHHHHSSE-EEEEESSCCHHHHHHHHHHEEEE-EEEEECCCCSSEEEEE--HHHHHHTTCEEEECCSCC-
T ss_pred             ccch--hhhhcccccCCC-ceEEeecCCHHHHHHHHHHhccC-CceEecccccCCCCCC--HHHHHHCCcEEEEEeeCC-
Confidence            8876  888888888754 44556667778999999999998 9999999876555444  3334 4999999998665 


Q ss_pred             CcCCcHHHHHHHHHcCCcc
Q 018072          327 KPRTDLPSVVDMYMNKVIR  345 (361)
Q Consensus       327 ~~~~~~~~~~~~~~~~~l~  345 (361)
                        +++++++++++++|+|+
T Consensus       152 --~~~~~~~l~l~~~Gkik  168 (168)
T d1rjwa2         152 --RKDLQEALQFAAEGKVK  168 (168)
T ss_dssp             --HHHHHHHHHHHHTTSCC
T ss_pred             --HHHHHHHHHHHHhCCCC
Confidence              47899999999999984

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.93  E-value=4.5e-26  Score=190.68  Aligned_cols=165  Identities=22%  Similarity=0.327  Sum_probs=139.3

Q ss_pred             ChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCC
Q 018072          169 PLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTS  248 (361)
Q Consensus       169 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~  248 (361)
                      +.+.||.+.|+..|+|+++ ++.++++|++|+|+|+|++|++++|+|+.+|+ +|++++++++|+++++++|+++++++.
T Consensus         2 p~e~AApl~cag~Ta~~al-~~~~~~~g~~vlI~GaG~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~a~~lGa~~~i~~~   79 (168)
T d1piwa2           2 PSHLAAPLLCGGLTVYSPL-VRNGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMGADHYIATL   79 (168)
T ss_dssp             CHHHHGGGGTHHHHHHHHH-HHTTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEEGG
T ss_pred             CHHHHHHHHHHHHHHHHHH-HHhCcCCCCEEEEECCCCcchhHHHHhhhccc-cccccccchhHHHHhhccCCcEEeecc
Confidence            3466889999999999996 56899999999999999999999999999999 899999999999999999999999876


Q ss_pred             CCCccHHHHHHHHcCCCccEEEEccCChH--HHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEEEEeeecCC
Q 018072          249 EHDRPIQEVIAEMTNGGVDRSVECTGNID--NMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNY  326 (361)
Q Consensus       249 ~~~~~~~~~i~~~~~~g~Dvvid~~g~~~--~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~  326 (361)
                      +.+ ++.+    ...+++|+++|++++..  .++.++++++++ |+++++|.......+++.+. ++|++++.|++.++ 
T Consensus        80 ~~~-~~~~----~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~-G~iv~~G~~~~~~~~~~~~~-~~k~~~i~Gs~~g~-  151 (168)
T d1piwa2          80 EEG-DWGE----KYFDTFDLIVVCASSLTDIDFNIMPKAMKVG-GRIVSISIPEQHEMLSLKPY-GLKAVSISYSALGS-  151 (168)
T ss_dssp             GTS-CHHH----HSCSCEEEEEECCSCSTTCCTTTGGGGEEEE-EEEEECCCCCSSCCEEECGG-GCBSCEEEECCCCC-
T ss_pred             chH-HHHH----hhhcccceEEEEecCCccchHHHHHHHhhcc-ceEEEeccccccccccHHHH-HhCCcEEEEEeeCC-
Confidence            543 2322    23348999999988644  467899999997 99999998776666666543 45999999998776 


Q ss_pred             CcCCcHHHHHHHHHcCCcc
Q 018072          327 KPRTDLPSVVDMYMNKVIR  345 (361)
Q Consensus       327 ~~~~~~~~~~~~~~~~~l~  345 (361)
                        +++++++++++++|+|+
T Consensus       152 --~~~~~e~l~li~~gkIk  168 (168)
T d1piwa2         152 --IKELNQLLKLVSEKDIK  168 (168)
T ss_dssp             --HHHHHHHHHHHHHTTCC
T ss_pred             --HHHHHHHHHHHHhCCCC
Confidence              47999999999999874

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.93  E-value=5.3e-26  Score=190.73  Aligned_cols=171  Identities=13%  Similarity=0.113  Sum_probs=135.0

Q ss_pred             CChhhhhccccchhhhhhhh---hhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCE
Q 018072          168 APLDKVCILSCGVSTGLGAT---LNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD  243 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~---~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~  243 (361)
                      +|++|||++++++.|||+++   .+....++|++|||+|+ |++|.+++|+|+.+|+ +|+++.++++|.++++++|+++
T Consensus         1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga-~Viat~~s~~k~~~~~~lGa~~   79 (176)
T d1xa0a2           1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLGAKE   79 (176)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTTCSE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCC-ceEEecCchHHHHHHHhcccce
Confidence            58899999999999999664   45678899999999987 9999999999999999 8999999999999999999999


Q ss_pred             EEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEee
Q 018072          244 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTF  322 (361)
Q Consensus       244 vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~  322 (361)
                      +++++..   +.+.++...++++|+|||++|+ +.+..++++|+++ |+++.+|... ....+++...++ |++++.|..
T Consensus        80 vi~~~~~---~~~~~~~~~~~gvD~vid~vgg-~~~~~~l~~l~~~-Griv~~G~~~-g~~~~~~~~~~~~k~~~i~Gv~  153 (176)
T d1xa0a2          80 VLAREDV---MAERIRPLDKQRWAAAVDPVGG-RTLATVLSRMRYG-GAVAVSGLTG-GAEVPTTVHPFILRGVSLLGID  153 (176)
T ss_dssp             EEECC------------CCSCCEEEEEECSTT-TTHHHHHHTEEEE-EEEEECSCCS-SSCCCCCSHHHHHTTCEEEECC
T ss_pred             eeecchh---HHHHHHHhhccCcCEEEEcCCc-hhHHHHHHHhCCC-ceEEEeeccc-CcccCCCHHHHHHCCcEEEEEe
Confidence            9998653   3344444444599999999998 7899999999998 9999999875 334455555555 999999975


Q ss_pred             ecCCCcCCcHHHHHHHHHcCCcccC
Q 018072          323 FGNYKPRTDLPSVVDMYMNKVIRFS  347 (361)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~~l~~~  347 (361)
                      ... .+.++..++++.+. ++++++
T Consensus       154 ~~~-~~~~~~~~~~~~la-g~lkP~  176 (176)
T d1xa0a2         154 SVY-CPMDLRLRIWERLA-GDLKPD  176 (176)
T ss_dssp             SSS-CCHHHHHHHHHHHH-TTTCCC
T ss_pred             CCc-CCHHHHHHHHHHHh-cccCCC
Confidence            333 23456677777764 777653

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.92  E-value=3.6e-27  Score=198.76  Aligned_cols=156  Identities=17%  Similarity=0.092  Sum_probs=128.4

Q ss_pred             ccceeEEEeecCCCC-----eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC----------CCCCcccccce
Q 018072            8 ILTCKAAVAWEAGKP-----LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT----------PLFPRIFGHEA   72 (361)
Q Consensus         8 ~~~m~a~~~~~~~~~-----~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~----------~~~p~~~G~e~   72 (361)
                      |.||||+++.++|+|     ++..++|.|+|+++||||||++++||++|+++++|.++.          ...|.++|+|+
T Consensus         1 m~t~kA~v~~~~G~p~~~l~l~~~~~p~p~~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~G~e~   80 (175)
T d1gu7a1           1 MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEG   80 (175)
T ss_dssp             CEEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCC
T ss_pred             CceeEEEEEccCCCcccccEEEEEECCCCCCCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCccccccc
Confidence            468999999999886     444577777889999999999999999999998886532          24678999999


Q ss_pred             eEEEEEeCCCCCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCccccee
Q 018072           73 AGVVESVGEGVSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSE  152 (361)
Q Consensus        73 ~G~V~~~G~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae  152 (361)
                      +|+|++.|..+..++.||+|.....                                                ..|+|+|
T Consensus        81 ~g~V~~~~~~~~~~~~g~~v~~~~~------------------------------------------------~~g~~ae  112 (175)
T d1gu7a1          81 LFEVIKVGSNVSSLEAGDWVIPSHV------------------------------------------------NFGTWRT  112 (175)
T ss_dssp             EEEEEEECTTCCSCCTTCEEEESSS------------------------------------------------CCCCSBS
T ss_pred             ccccccccccccccccccceecccc------------------------------------------------ccccccc
Confidence            9999999999999999999975421                                                1248999


Q ss_pred             eEEEeccceEECCCCCChhhhhccccchhhhhhhhhh-hcCCCCCCEEEEEc-C-CHHHHHHHH
Q 018072          153 YTVVHSGCVAKINPLAPLDKVCILSCGVSTGLGATLN-VAKPERGSSVAVFG-L-GAVGLAAAE  213 (361)
Q Consensus       153 ~v~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~a~~~-~~~~~~g~~VlI~G-~-g~vG~~a~~  213 (361)
                      |+++|+++++++|++++.+.+  +.+...|||+++.. ..++++|++|||+| + |++|++++|
T Consensus       113 y~~v~~~~~~~iP~~~~~~~a--~~~~~~ta~~~l~~~~~~~~~g~~vli~gaa~~gvG~~~iQ  174 (175)
T d1gu7a1         113 HALGNDDDFIKLPNPAQSKAN--GKPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLIT  174 (175)
T ss_dssp             EEEEEGGGEEEECCHHHHHHT--TCSCCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEE
T ss_pred             eeeehhhhccCCCccchhhhh--ccchHHHHHHHHHHHhcCCCCCCEEEEECccchhhhheEEe
Confidence            999999999999998754443  34567889988654 46799999999997 4 679988776

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=3.4e-25  Score=187.18  Aligned_cols=169  Identities=18%  Similarity=0.203  Sum_probs=136.6

Q ss_pred             CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEc
Q 018072          168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  246 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~  246 (361)
                      +|+++||+++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|++++++++|+++++++|+++++|
T Consensus         1 isfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga-~Vi~~~~s~~k~~~~~~lGa~~vi~   79 (179)
T d1qora2           1 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVIN   79 (179)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCC-eEeecccchHHHHHHHhcCCeEEEE
Confidence            5789999999999999999988899999999999977 8899999999999999 9999999999999999999999999


Q ss_pred             CCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc--cccEEEEeee
Q 018072          247 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL--NERTLKGTFF  323 (361)
Q Consensus       247 ~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~--~~~~l~g~~~  323 (361)
                      +++.+  +.+.+++++++ ++|+++|++|+ +.+..++++++++ |+++.+|..... ....+...+.  +.+.+.+..+
T Consensus        80 ~~~~d--~~~~v~~~t~g~g~d~v~d~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~l  154 (179)
T d1qora2          80 YREED--LVERLKEITGGKKVRVVYDSVGR-DTWERSLDCLQRR-GLMVSFGNSSGA-VTGVNLGILNQKGSLYVTRPSL  154 (179)
T ss_dssp             TTTSC--HHHHHHHHTTTCCEEEEEECSCG-GGHHHHHHTEEEE-EEEEECCCTTCC-CCCBCTHHHHHTTSCEEECCCH
T ss_pred             CCCCC--HHHHHHHHhCCCCeEEEEeCccH-HHHHHHHHHHhcC-CeeeecccccCC-ccccchhhhhccceEEEEeeEE
Confidence            98876  99999999988 99999999987 7899999999998 999999876633 2223222222  3333332222


Q ss_pred             cC-CCcCC----cHHHHHHHHHcC
Q 018072          324 GN-YKPRT----DLPSVVDMYMNK  342 (361)
Q Consensus       324 ~~-~~~~~----~~~~~~~~~~~~  342 (361)
                      .. ...++    .++++++++++|
T Consensus       155 ~~~~~~~~~~~~~~~~l~~lv~~G  178 (179)
T d1qora2         155 QGYITTREELTEASNELFSLIASG  178 (179)
T ss_dssp             HHHCCSHHHHHHHHHHHHHHHHTT
T ss_pred             eeecCCHHHHHHHHHHHHHHHHCc
Confidence            11 12222    345677788776

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=5.9e-25  Score=183.82  Aligned_cols=164  Identities=21%  Similarity=0.312  Sum_probs=134.1

Q ss_pred             CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcC
Q 018072          168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  247 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~  247 (361)
                      .+++.+|.+.|+..|+|+++ +.+++++|++|+|+|+|++|++++|+|+.+|+ ++++++++++|+++++++|+++++++
T Consensus         4 ~~~a~~Apl~Cag~Tay~al-~~~~~~~G~~VlI~GaG~vG~~a~qlak~~Ga-~~i~~~~~~~~~~~a~~lGad~~i~~   81 (168)
T d1uufa2           4 EQLAAVAPLLCAGITTYSPL-RHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKALGADEVVNS   81 (168)
T ss_dssp             GGHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEET
T ss_pred             ccHHHHHHHHhHHHHHHHHH-HHhCCCCCCEEEEeccchHHHHHHHHhhcccc-cchhhccchhHHHHHhccCCcEEEEC
Confidence            34667888899999999996 67999999999999999999999999999999 77789999999999999999999998


Q ss_pred             CCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhh-ccccEEEEeeecCC
Q 018072          248 SEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINV-LNERTLKGTFFGNY  326 (361)
Q Consensus       248 ~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~~~  326 (361)
                      .+.+  .    .....+++|++||++|++..++.++++++++ |+++++|..... ...++...+ +|++++.|++.++ 
T Consensus        82 ~~~~--~----~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~-G~iv~~G~~~~~-~~~~~~~~l~~k~~~i~Gs~~~~-  152 (168)
T d1uufa2          82 RNAD--E----MAAHLKSFDFILNTVAAPHNLDDFTTLLKRD-GTMTLVGAPATP-HKSPEVFNLIMKRRAIAGSMIGG-  152 (168)
T ss_dssp             TCHH--H----HHTTTTCEEEEEECCSSCCCHHHHHTTEEEE-EEEEECCCC--------CHHHHHTTTCEEEECCSCC-
T ss_pred             chhh--H----HHHhcCCCceeeeeeecchhHHHHHHHHhcC-CEEEEeccCCCC-cccccHHHHHHCCcEEEEEeecC-
Confidence            7643  1    1111238999999999988999999999998 999999976533 333344434 4999999998776 


Q ss_pred             CcCCcHHHHHHHHHcCCc
Q 018072          327 KPRTDLPSVVDMYMNKVI  344 (361)
Q Consensus       327 ~~~~~~~~~~~~~~~~~l  344 (361)
                        +.+++++++++++++|
T Consensus       153 --~~d~~e~l~l~a~~~I  168 (168)
T d1uufa2         153 --IPETQEMLDFCAEHGI  168 (168)
T ss_dssp             --HHHHHHHHHHHHHHTC
T ss_pred             --HHHHHHHHHHHHHcCC
Confidence              4789999999988764

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.92  E-value=2.9e-26  Score=190.58  Aligned_cols=152  Identities=18%  Similarity=0.175  Sum_probs=126.0

Q ss_pred             cceeEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCCC
Q 018072            9 LTCKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSD   85 (361)
Q Consensus         9 ~~m~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~~   85 (361)
                      .+|||+++.+++++  +++++++.|++++|||||||+++|||++|++.+.|.++. ...|.++|+|++|+|++  +.+.+
T Consensus         2 ~~~ka~~~~~~g~~~~l~~~~v~~p~l~~~eVLVkV~a~gin~~D~~~~~g~~~~~~~~~~~~g~e~~G~v~~--~~~~~   79 (162)
T d1tt7a1           2 TLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVS--SNDPR   79 (162)
T ss_dssp             CEEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEE--CSSTT
T ss_pred             CcEEEEEEEecCCCeEEEEEEcCCCCCCCCEEEEEEEEecccchhhheeeecccccccceeeeeeeccccccc--ccccc
Confidence            46999999987765  999999999999999999999999999999998887764 45688999999999998  56678


Q ss_pred             CCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECC
Q 018072           86 LEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKIN  165 (361)
Q Consensus        86 ~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP  165 (361)
                      +++||+|+.....                                 .++          ...|+||||+++|++.++++|
T Consensus        80 ~~~g~~v~~~~~~---------------------------------~g~----------~~~G~~aey~~v~~~~l~~iP  116 (162)
T d1tt7a1          80 FAEGDEVIATSYE---------------------------------LGV----------SRDGGLSEYASVPGDWLVPLP  116 (162)
T ss_dssp             CCTTCEEEEESTT---------------------------------BTT----------TBCCSSBSSEEECGGGEEECC
T ss_pred             cccceeeEeeecc---------------------------------cee----------ccccccceEEEecHHHEEECC
Confidence            9999999855321                                 011          112499999999999999999


Q ss_pred             CCCChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CH
Q 018072          166 PLAPLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GA  206 (361)
Q Consensus       166 ~~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~  206 (361)
                      +++++++||.+++...|||.++. ...++.+++|||.|+ |.
T Consensus       117 ~~ls~~~Aa~~~~~~~ta~~~~~-~~~~~~~~~Vli~ga~G~  157 (162)
T d1tt7a1         117 QNLSLKEAMVDQLLTIVDREVSL-EETPGALKDILQNRIQGR  157 (162)
T ss_dssp             TTCCHHHHHHSCSTTSEEEEECS-TTHHHHHHHTTTTCCSSE
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHH-hcCCCCCCEEEEECCcce
Confidence            99999999999999999998753 344555677888776 53

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.92  E-value=1e-24  Score=177.49  Aligned_cols=131  Identities=17%  Similarity=0.158  Sum_probs=109.6

Q ss_pred             eeEEEeecCCCC--eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 018072           11 CKAAVAWEAGKP--LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQT-PLFPRIFGHEAAGVVESVGEGVSDLE   87 (361)
Q Consensus        11 m~a~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~v~~~~   87 (361)
                      |||+++.+++++  +++++++.|+|++|||+|||.++|||++|.+...|.++. ..+|.++|+|++|+|+++|.  ..++
T Consensus         1 MkA~v~~~~~~~~~l~i~~v~~p~~~~geVlVkV~a~gin~~D~~~~~G~~~~~~~~p~v~G~e~~G~V~~~~~--~~~~   78 (146)
T d1o89a1           1 LQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAGTVRTSED--PRFH   78 (146)
T ss_dssp             CEEEEEECC---CEEEEEECCGGGSCSCSEEEEEEEEECCHHHHHHHHTCSSCCCSSSBCCCSEEEEEEEEECS--TTCC
T ss_pred             CeEEEEEcCCCceEEEEEEcCCCCCCCCEEEEEEeeccCccceeeEEEeecccccccceeccccccccceeecc--CCcc
Confidence            899999999887  778999999999999999999999999999998887654 46899999999999999766  5799


Q ss_pred             CCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceEECCCC
Q 018072           88 VGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVAKINPL  167 (361)
Q Consensus        88 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~~iP~~  167 (361)
                      +||+|++....                        .|                   ....|+||||+++|++.++++|++
T Consensus        79 ~g~~v~~~~~~------------------------~g-------------------~~~~G~~Aey~~v~~~~vv~lP~~  115 (146)
T d1o89a1          79 AGQEVLLTGWG------------------------VG-------------------ENHWGGLAEQARVKGDWLVAMPQG  115 (146)
T ss_dssp             TTCEEEEECTT------------------------BT-------------------TTBCCSSBSEEEECGGGCEECCTT
T ss_pred             ceeeEEeeccc------------------------ce-------------------ecCCCcceeeeeeeeeeEEECCCC
Confidence            99999854211                        01                   112359999999999999999999


Q ss_pred             CChhhhhccccchhhhhhh
Q 018072          168 APLDKVCILSCGVSTGLGA  186 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a  186 (361)
                      +|+++||++++++.||+..
T Consensus       116 ls~~eAA~l~~a~~tA~~~  134 (146)
T d1o89a1         116 QAAKEISLSEAPNFAEAII  134 (146)
T ss_dssp             SCCEEECGGGHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHH
Confidence            9999999999888888654

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.91  E-value=1.4e-24  Score=183.89  Aligned_cols=164  Identities=17%  Similarity=0.227  Sum_probs=136.4

Q ss_pred             hccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCc
Q 018072          174 CILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDR  252 (361)
Q Consensus       174 a~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~  252 (361)
                      ++++++++|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +||++++++++.++++++|+++++++.+.+ 
T Consensus         8 ~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~Ga~~vi~~~~~~-   85 (182)
T d1v3va2           8 GTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQIGFDAAFNYKTVN-   85 (182)
T ss_dssp             TTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTSCS-
T ss_pred             HHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCC-EEEEeCCCHHHHHHHHhhhhhhhccccccc-
Confidence            4677889999999999999999999999988 8999999999999999 999999999999999999999999988776 


Q ss_pred             cHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCC-----CceeecChhhhc-cccEEEEeeecC
Q 018072          253 PIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSK-----DAVFMTKPINVL-NERTLKGTFFGN  325 (361)
Q Consensus       253 ~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-----~~~~~~~~~~~~-~~~~l~g~~~~~  325 (361)
                       +.+.+.+.+.+ ++|+|||++|+ +.++.++++++++ |+++.+|....     .....+++..++ |++++.|++..+
T Consensus        86 -~~~~~~~~~~~~Gvd~v~D~vG~-~~~~~~~~~l~~~-G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~~~~  162 (182)
T d1v3va2          86 -SLEEALKKASPDGYDCYFDNVGG-EFLNTVLSQMKDF-GKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYR  162 (182)
T ss_dssp             -CHHHHHHHHCTTCEEEEEESSCH-HHHHHHGGGEEEE-EEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECCGGG
T ss_pred             -HHHHHHHHhhcCCCceeEEecCc-hhhhhhhhhccCC-CeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEEEec
Confidence             66666666655 99999999997 7899999999998 99999986432     122233344444 999999998777


Q ss_pred             CCc---CCcHHHHHHHHHcC
Q 018072          326 YKP---RTDLPSVVDMYMNK  342 (361)
Q Consensus       326 ~~~---~~~~~~~~~~~~~~  342 (361)
                      +..   .+.++++++|+++|
T Consensus       163 ~~~~~~~~~~~~l~~~i~~G  182 (182)
T d1v3va2         163 WQGDVREKALRDLMKWVLEG  182 (182)
T ss_dssp             CCHHHHHHHHHHHHHHHHTT
T ss_pred             cChHHHHHHHHHHHHHHhCc
Confidence            642   24467888888875

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.90  E-value=1.5e-24  Score=181.72  Aligned_cols=146  Identities=19%  Similarity=0.306  Sum_probs=119.1

Q ss_pred             CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEc
Q 018072          168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVN  246 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~  246 (361)
                      +|+++||++++++.|||+++ +.++++||++|||+|+ |++|++++|+|+..|+ +|++++++++|++.++++|++++++
T Consensus         1 ls~eeAA~l~~~~~TA~~al-~~~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~-~vi~~~~~~~~~~~~~~lGa~~~i~   78 (171)
T d1iz0a2           1 LSPEEAAAFPVSFLTAYLAL-KRAQARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAAT   78 (171)
T ss_dssp             CCHHHHHTSHHHHHHHHHHH-HHTTCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEeccccchhhhhhhhccccc-ccccccccccccccccccccceeee
Confidence            57899999999999999997 5589999999999987 9999999999999999 8999999999999999999999998


Q ss_pred             CCCCCccHHHHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeec
Q 018072          247 TSEHDRPIQEVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFG  324 (361)
Q Consensus       247 ~~~~~~~~~~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~  324 (361)
                      +.+    ..   ...+.+ ++|+|||++|.  .++.++++++++ |+++.+|...+ ....+++..++ |++++.|++.+
T Consensus        79 ~~~----~~---~~~~~~~g~D~v~d~~G~--~~~~~~~~l~~~-G~~v~~G~~~g-~~~~~~~~~~~~k~~~i~g~~~~  147 (171)
T d1iz0a2          79 YAE----VP---ERAKAWGGLDLVLEVRGK--EVEESLGLLAHG-GRLVYIGAAEG-EVAPIPPLRLMRRNLAVLGFWLT  147 (171)
T ss_dssp             GGG----HH---HHHHHTTSEEEEEECSCT--THHHHHTTEEEE-EEEEEC--------CCCCTTHHHHTTCEEEECCHH
T ss_pred             hhh----hh---hhhhccccccccccccch--hHHHHHHHHhcC-CcEEEEeCCCC-CCCCccHHHHHHCCcEEEEEeCc
Confidence            753    22   233334 89999999874  689999999998 99999997652 23334444444 99999999877


Q ss_pred             CC
Q 018072          325 NY  326 (361)
Q Consensus       325 ~~  326 (361)
                      .+
T Consensus       148 ~~  149 (171)
T d1iz0a2         148 PL  149 (171)
T ss_dssp             HH
T ss_pred             Ch
Confidence            65

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.90  E-value=3e-24  Score=182.93  Aligned_cols=172  Identities=16%  Similarity=0.194  Sum_probs=136.4

Q ss_pred             CChhhhhccccchhhhhhhhhhhcCCCCCCEEEEE-cC-CHHHHHHHHHHHHcCCCeEEEEcCCh----hhHHHHHHcCC
Q 018072          168 APLDKVCILSCGVSTGLGATLNVAKPERGSSVAVF-GL-GAVGLAAAEGARIAGASRIIGVDRSS----KRFEEAKKFGV  241 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~-G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~----~~~~~~~~~G~  241 (361)
                      +|+++||+++++++|||+++.+..+++||++|+|+ |+ |++|++++|+|+.+|+ +||++.++.    ++.+.++++|+
T Consensus         1 ls~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga-~vI~~v~~~~~~~~~~~~~~~lGa   79 (189)
T d1gu7a2           1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNF-NSISVIRDRPNLDEVVASLKELGA   79 (189)
T ss_dssp             CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTC-EEEEEECCCTTHHHHHHHHHHHTC
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCC-eEEEEEecccccchHHhhhhhccc
Confidence            58899999999999999999899999999999997 55 9999999999999999 777775443    45667889999


Q ss_pred             CEEEcCCCC-CccHHHHHHHHc---CCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-ccc
Q 018072          242 TDFVNTSEH-DRPIQEVIAEMT---NGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NER  316 (361)
Q Consensus       242 ~~vv~~~~~-~~~~~~~i~~~~---~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~  316 (361)
                      +++++++.. ..++.+.+++++   ++++|++||++|+ +.++.++++|+++ |+++.+|.... ....++...++ |++
T Consensus        80 d~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~-~~~~~~~~~l~~~-G~~v~~G~~~~-~~~~~~~~~l~~k~~  156 (189)
T d1gu7a2          80 TQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGG-KSSTGIARKLNNN-GLMLTYGGMSF-QPVTIPTSLYIFKNF  156 (189)
T ss_dssp             SEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCH-HHHHHHHHTSCTT-CEEEECCCCSS-CCEEECHHHHHHSCC
T ss_pred             cEEEeccccchhHHHHHHHHHHhhccCCceEEEECCCc-chhhhhhhhhcCC-cEEEEECCccC-CCccCcHHHHHHCCc
Confidence            999987542 223555555543   3489999999997 6789999999998 99999997653 23444454444 999


Q ss_pred             EEEEeeecCCCc------CCcHHHHHHHHHcCC
Q 018072          317 TLKGTFFGNYKP------RTDLPSVVDMYMNKV  343 (361)
Q Consensus       317 ~l~g~~~~~~~~------~~~~~~~~~~~~~~~  343 (361)
                      ++.|++++.+..      ++.++++++++++||
T Consensus       157 ~i~G~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk  189 (189)
T d1gu7a2         157 TSAGFWVTELLKNNKELKTSTLNQIIAWYEEGK  189 (189)
T ss_dssp             EEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTC
T ss_pred             EEEEEEehHhhhhCHHHHHHHHHHHHHHHHcCC
Confidence            999998765421      345788999999886

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.90  E-value=7e-23  Score=174.89  Aligned_cols=166  Identities=23%  Similarity=0.211  Sum_probs=138.4

Q ss_pred             hhhhccccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCC
Q 018072          171 DKVCILSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH  250 (361)
Q Consensus       171 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~  250 (361)
                      ++.+.+..++.|||+++ +.+++++|++|||+|+|++|++++|+|+..|+.+|++++.+++|+++++++|+++++++.+.
T Consensus         2 ~d~~~l~d~~~ta~~a~-~~a~v~~G~tVlV~GaG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~~   80 (195)
T d1kola2           2 RDLTCLSDILPTGYHGA-VTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLDT   80 (195)
T ss_dssp             HHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSSS
T ss_pred             chHHhcccHHHHHHHHH-HHhCCCCCCEEEEECcCHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEEeCCCc
Confidence            46677888999999995 77999999999999999999999999999999899999999999999999999999988776


Q ss_pred             CccHHHHHHHHcCC-CccEEEEccCC---------------hHHHHHHHHHhcCCCcEEEEEcCCCCCce----------
Q 018072          251 DRPIQEVIAEMTNG-GVDRSVECTGN---------------IDNMISAFECVHDGWGVAVLVGVPSKDAV----------  304 (361)
Q Consensus       251 ~~~~~~~i~~~~~~-g~Dvvid~~g~---------------~~~~~~~~~~l~~~~G~iv~~g~~~~~~~----------  304 (361)
                      +  +.+.+.+++++ ++|++||++|.               ++.++.+++.++++ |+++++|.......          
T Consensus        81 ~--~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~g-G~v~~~G~~~~~~~~~~~~~~~~~  157 (195)
T d1kola2          81 P--LHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVA-GKIGIPGLYVTEDPGAVDAAAKIG  157 (195)
T ss_dssp             C--HHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEE-EEEEECSCCCSCCTTCSSHHHHTT
T ss_pred             C--HHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcC-CEEEEeeecCCCcccchhhhhhcC
Confidence            6  88899999988 99999999984               46899999999997 99999997653322          


Q ss_pred             -eecChhhhc-cccEEEEeeecCCCcCCcHHHHHHHHHcCC
Q 018072          305 -FMTKPINVL-NERTLKGTFFGNYKPRTDLPSVVDMYMNKV  343 (361)
Q Consensus       305 -~~~~~~~~~-~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~  343 (361)
                       +.++...++ |++++.+   |....+..++++++++.++|
T Consensus       158 ~~~~~~~~~~~k~~~i~~---g~~~v~~~~~~Ll~~I~~~k  195 (195)
T d1kola2         158 SLSIRFGLGWAKSHSFHT---GQTPVMKYNRALMQAIMWDR  195 (195)
T ss_dssp             CCCCCHHHHHHTTCEEEE---SSCCHHHHHHHHHHHHHTTS
T ss_pred             ceeeeHHHHHhhcceecc---CCCchHHHHHHHHHHHHcCC
Confidence             122222233 8888753   34444566889999998875

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=1.2e-23  Score=178.78  Aligned_cols=172  Identities=18%  Similarity=0.173  Sum_probs=132.1

Q ss_pred             CCChhhhhccccchhhhhhhhhhhcCCCCC--CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhH-HHHHHcCCC
Q 018072          167 LAPLDKVCILSCGVSTGLGATLNVAKPERG--SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRF-EEAKKFGVT  242 (361)
Q Consensus       167 ~~~~~~aa~l~~~~~ta~~a~~~~~~~~~g--~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~-~~~~~~G~~  242 (361)
                      ++|+...| ++++..|||+++.+..++++|  ++|||+|+ |++|++++|+|+..|+.+|+++++++++. ++++++|++
T Consensus         1 ~~~~~~ga-lg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad   79 (187)
T d1vj1a2           1 HLSYFLGA-IGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFD   79 (187)
T ss_dssp             CGGGGGTT-TSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCS
T ss_pred             CccHHHHH-hhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccce
Confidence            35666654 666899999999999999988  88999986 99999999999999997788776666554 455679999


Q ss_pred             EEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCC-ceeecC-------hhhh-c
Q 018072          243 DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD-AVFMTK-------PINV-L  313 (361)
Q Consensus       243 ~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~-~~~~~~-------~~~~-~  313 (361)
                      +++|+.+++  +.+.+++.++.|+|+|||++|+ +.++.++++++++ |+++.+|..++. ...+..       ...+ .
T Consensus        80 ~vi~~~~~~--~~~~~~~~~~~GvDvv~D~vGg-~~~~~~~~~l~~~-G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~~  155 (187)
T d1vj1a2          80 AAVNYKTGN--VAEQLREACPGGVDVYFDNVGG-DISNTVISQMNEN-SHIILCGQISQYNKDVPYPPPLPPAVEAIRKE  155 (187)
T ss_dssp             EEEETTSSC--HHHHHHHHCTTCEEEEEESSCH-HHHHHHHTTEEEE-EEEEEC------------CCCCCHHHHHHHHH
T ss_pred             EEeeccchh--HHHHHHHHhccCceEEEecCCc-hhHHHHhhhcccc-ccEEEeccccccccccccCCchHHHHHHHHHh
Confidence            999999877  8899999987799999999997 7899999999998 999999975431 111111       1112 3


Q ss_pred             cccEEEEeeecCCCc--CCcHHHHHHHHHcCC
Q 018072          314 NERTLKGTFFGNYKP--RTDLPSVVDMYMNKV  343 (361)
Q Consensus       314 ~~~~l~g~~~~~~~~--~~~~~~~~~~~~~~~  343 (361)
                      |++++.|+....+.+  .+.++++.+++++||
T Consensus       156 k~i~~~g~~~~~~~~~~~e~~~~l~~~i~~Gk  187 (187)
T d1vj1a2         156 RNITRERFTVLNYKDKFEPGILQLSQWFKEGK  187 (187)
T ss_dssp             TTCEEEECCGGGCGGGHHHHHHHHHHHHHHTS
T ss_pred             cceEEEEeEecchHHHHHHHHHHHHHHHHCcC
Confidence            899999987766532  345677888888886

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.85  E-value=3.5e-22  Score=167.55  Aligned_cols=160  Identities=14%  Similarity=0.186  Sum_probs=125.6

Q ss_pred             CChhhhhccccchhhhhhhhh---hhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCE
Q 018072          168 APLDKVCILSCGVSTGLGATL---NVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD  243 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~---~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~  243 (361)
                      +|+.+||.++++..|||++++   +....+++++|||+|+ |++|++++|+||.+|+ +||++.++++|.+.++++|+++
T Consensus         1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga-~Via~~~~~~k~~~~~~lGad~   79 (177)
T d1o89a2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSLGASR   79 (177)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTEEE
T ss_pred             CCHHHHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCC-CeEEEecchhHHHHHHhhcccc
Confidence            578899999999999997753   3334455679999987 9999999999999999 8999999999999999999999


Q ss_pred             EEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEee
Q 018072          244 FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTF  322 (361)
Q Consensus       244 vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~  322 (361)
                      ++++++.+  +.   +.+.+..+|.++|++|+ ..+..++++++++ |+++.+|.... ...+++...++ |++++.|++
T Consensus        80 vi~~~~~~--~~---~~l~~~~~~~vvD~Vgg-~~~~~~l~~l~~~-Griv~~G~~~~-~~~~~~~~~~~~k~~~i~G~~  151 (177)
T d1o89a2          80 VLPRDEFA--ES---RPLEKQVWAGAIDTVGD-KVLAKVLAQMNYG-GCVAACGLAGG-FTLPTTVMPFILRNVRLQGVD  151 (177)
T ss_dssp             EEEGGGSS--SC---CSSCCCCEEEEEESSCH-HHHHHHHHTEEEE-EEEEECCCTTC-SCCCCCSHHHHHHCCEEEECC
T ss_pred             ccccccHH--HH---HHHHhhcCCeeEEEcch-HHHHHHHHHhccc-cceEeecccCC-ccccccHHHHHHCCCeEEEEe
Confidence            99987654  21   22333478999999998 7899999999998 99999998763 33444444444 999999986


Q ss_pred             ecCCCcCCcHHHHHH
Q 018072          323 FGNYKPRTDLPSVVD  337 (361)
Q Consensus       323 ~~~~~~~~~~~~~~~  337 (361)
                      .... ++++..++++
T Consensus       152 ~~~~-~~~~~~~~~~  165 (177)
T d1o89a2         152 SVMT-PPERRAQAWQ  165 (177)
T ss_dssp             SSSC-CHHHHHHHHH
T ss_pred             cccC-CHHHHHHHHH
Confidence            5433 2344444443

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.82  E-value=4.7e-21  Score=159.07  Aligned_cols=154  Identities=14%  Similarity=0.136  Sum_probs=116.7

Q ss_pred             chhhhhh---hhhhhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccH
Q 018072          179 GVSTGLG---ATLNVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPI  254 (361)
Q Consensus       179 ~~~ta~~---a~~~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~  254 (361)
                      +..|||.   ++.+....+++++|||+|+ |++|++++|+|+.+|+ +|+++.++++|.++++++|+++++++++..   
T Consensus         4 aGlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~~~~lGad~vi~~~~~~---   79 (167)
T d1tt7a2           4 AGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQLGASEVISREDVY---   79 (167)
T ss_dssp             HHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHHTCSEEEEHHHHC---
T ss_pred             hHHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCC-ceEEEecCHHHHHHHHhhcccceEeccchh---
Confidence            4556664   4555666778889999987 9999999999999999 899999999999999999999999875321   


Q ss_pred             HHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhc-cccEEEEeeecCCCcCCcHH
Q 018072          255 QEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVL-NERTLKGTFFGNYKPRTDLP  333 (361)
Q Consensus       255 ~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~-~~~~l~g~~~~~~~~~~~~~  333 (361)
                      .+.++...++++|+|||++|+ +.+..++++|+++ |+++.+|...+ ...+++...++ |+++++|+..... +.+...
T Consensus        80 ~~~~~~~~~~gvd~vid~vgg-~~~~~~~~~l~~~-G~iv~~G~~~g-~~~~~~~~~l~~k~~~i~G~~~~~~-~~~~~~  155 (167)
T d1tt7a2          80 DGTLKALSKQQWQGAVDPVGG-KQLASLLSKIQYG-GSVAVSGLTGG-GEVPATVYPFILRGVSLLGIDSVYC-PMDVRA  155 (167)
T ss_dssp             SSCCCSSCCCCEEEEEESCCT-HHHHHHHTTEEEE-EEEEECCCSSC-SCEEECSHHHHTSCCEEEECCSSSC-CHHHHH
T ss_pred             chhhhcccCCCceEEEecCcH-HHHHHHHHHhccC-ceEEEeeccCC-CcccCCHHHHHHCCcEEEEEecCCC-CHHHHH
Confidence            111222233489999999998 7899999999998 99999998774 34444444444 9999999764332 234445


Q ss_pred             HHHHHHH
Q 018072          334 SVVDMYM  340 (361)
Q Consensus       334 ~~~~~~~  340 (361)
                      ++.+.+.
T Consensus       156 ~~~~~l~  162 (167)
T d1tt7a2         156 AVWERMS  162 (167)
T ss_dssp             HHHHHTT
T ss_pred             HHHHHHH
Confidence            5555553

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.64  E-value=2e-15  Score=121.54  Aligned_cols=133  Identities=16%  Similarity=0.107  Sum_probs=100.3

Q ss_pred             cceeEEEeecC--CCC----eEEEEeecCCCCCCeEEEEEeEEecCccchhccccCCCCCCCCcccccceeEEEEEeCCC
Q 018072            9 LTCKAAVAWEA--GKP----LIIQDVEVAPPQAMEVRIKIKYTSLCRTDLYFWESKGQTPLFPRIFGHEAAGVVESVGEG   82 (361)
Q Consensus         9 ~~m~a~~~~~~--~~~----~~~~~~~~p~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~   82 (361)
                      ++.|+|++.+.  |.|    |++++.++|+|++||||||+++.++++..+.....    .....++..+++|+|++  |+
T Consensus         2 ~~~k~~vl~~~P~G~P~~~~f~l~e~~ip~~~~gevLvk~~~~svDp~~R~~~~~----~~~g~~~~g~~vg~Vv~--S~   75 (147)
T d1v3va1           2 VKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIASKR----LKEGAVMMGQQVARVVE--SK   75 (147)
T ss_dssp             CEEEEEEESSCCCSSCCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHGGG----SCTTSBCCCCEEEEEEE--ES
T ss_pred             cccEEEEEccCCCCCCcccceEEEEEECCCCCCCEEEEEEEEEeEcccccccccc----cccCCccccceEEEEEE--eC
Confidence            56789998875  433    99999999999999999999999998865543221    22333456688999998  77


Q ss_pred             CCCCCCCCEEeecCCCCCCCCccccCCCCCCCcccccCCcccccccCCCcccccCCCccccccCcccceeeEEEeccceE
Q 018072           83 VSDLEVGDHVLPVFTGECGDCRHCRSDVSNMCDLLRINPVRGVMLADGQSRFSINGEPVNHFLGTSTFSEYTVVHSGCVA  162 (361)
Q Consensus        83 v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~ae~v~v~~~~~~  162 (361)
                      .++|++||+|+..                                                    ++|+||.+++.+.+.
T Consensus        76 ~~~f~~GD~V~g~----------------------------------------------------~gw~ey~v~~~~~l~  103 (147)
T d1v3va1          76 NSAFPAGSIVLAQ----------------------------------------------------SGWTTHFISDGKGLE  103 (147)
T ss_dssp             CTTSCTTCEEEEC----------------------------------------------------CCSBSEEEECSSSCE
T ss_pred             CCcccCCCEEEEc----------------------------------------------------cCCEeEEEeccceee
Confidence            7899999999832                                                    279999999999999


Q ss_pred             ECCCCCC-----hhhhhccccchhhh-hhhhhhhcCCCCCCEEEE
Q 018072          163 KINPLAP-----LDKVCILSCGVSTG-LGATLNVAKPERGSSVAV  201 (361)
Q Consensus       163 ~iP~~~~-----~~~aa~l~~~~~ta-~~a~~~~~~~~~g~~VlI  201 (361)
                      ++|++.+     ....+++....+|| |..++  ...+.|++||+
T Consensus       104 kv~~~~~~~~~~~~~~~~lG~~Gmtaay~gl~--~~~k~Getvv~  146 (147)
T d1v3va1         104 KLLTEWPDKKIQYHEHVTKGFENMPAAFIEML--NGANLGKAVVT  146 (147)
T ss_dssp             ECCTTCCTTSSCCCEEEEECGGGHHHHHHHHH--TTCCSSEEEEE
T ss_pred             EccccccccccchhhhHhccccchHHHHHHhh--CCCCCCCEEEe
Confidence            9987643     33445566667775 43543  34578999986

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.45  E-value=4.3e-14  Score=100.00  Aligned_cols=73  Identities=19%  Similarity=0.245  Sum_probs=66.1

Q ss_pred             CChhhhhccccchhhhhhhhh---hhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCC
Q 018072          168 APLDKVCILSCGVSTGLGATL---NVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV  241 (361)
Q Consensus       168 ~~~~~aa~l~~~~~ta~~a~~---~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~  241 (361)
                      +|+++|+.++++..|||.+++   +....+++++|||+|+ |++|.+++|+|+.+|+ +|+++.+++++.++++++|+
T Consensus         1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~-~Vi~~t~s~~k~~~~~~lGA   77 (77)
T d1o8ca2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSLGA   77 (77)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCC-eEEEEECCHHHHHHHHHCCC
Confidence            578999999999999988754   4566799999999987 9999999999999999 89999999999999999985

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=98.13  E-value=2.5e-06  Score=69.18  Aligned_cols=103  Identities=19%  Similarity=0.203  Sum_probs=74.1

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCC------------------ccHHH
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD------------------RPIQE  256 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~------------------~~~~~  256 (361)
                      +..+|+|+|+|.+|+.|+..|+.+|+ +|.++|.+.++++++++++...+.......                  ....+
T Consensus        28 ~pa~VvViGaGvaG~~Aa~~A~~lGA-~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~  106 (183)
T d1l7da1          28 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  106 (183)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCcEEEEEcCcHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence            35689999999999999999999999 999999999999999999886542110000                  00122


Q ss_pred             HHHHHcCCCccEEEEccCChH------HHHHHHHHhcCCCcEEEEEcCCC
Q 018072          257 VIAEMTNGGVDRSVECTGNID------NMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       257 ~i~~~~~~g~Dvvid~~g~~~------~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      .+.+... ..|+||-++--+.      .-+..++.|+++ +.++.+....
T Consensus       107 ~l~~~l~-~aDlVI~talipG~~aP~lit~~mv~~Mk~G-SVIVDvaidq  154 (183)
T d1l7da1         107 AVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPG-SVIIDLAVEA  154 (183)
T ss_dssp             HHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTT-CEEEETTGGG
T ss_pred             HHHHHHH-hhhhheeeeecCCcccceeehHHHHHhcCCC-cEEEEEeecC
Confidence            2222221 5899999864222      236888999997 9999997544

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=98.12  E-value=2.5e-06  Score=68.19  Aligned_cols=99  Identities=22%  Similarity=0.160  Sum_probs=72.5

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      +..+|+|+|+|.+|+.|++.|+.+|+ .|.++|.+.+++++++......+.........+.+.++     ..|+||.++-
T Consensus        31 ~pa~V~ViGaGvaG~~A~~~A~~lGA-~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~-----~aDivI~aal  104 (168)
T d1pjca1          31 KPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVA-----EADLLIGAVL  104 (168)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHH-----TCSEEEECCC
T ss_pred             CCcEEEEECCChHHHHHHHHHhhCCC-EEEEEeCcHHHHHHHHHhhcccceeehhhhhhHHHhhc-----cCcEEEEeee
Confidence            45799999999999999999999999 99999999999999987543321111111112333332     4899999874


Q ss_pred             ChH------HHHHHHHHhcCCCcEEEEEcCCC
Q 018072          275 NID------NMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       275 ~~~------~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      -+.      .-+..++.|+++ +.++.+....
T Consensus       105 ipG~~aP~lIt~~mv~~Mk~G-SVIVDvaidq  135 (168)
T d1pjca1         105 VPGRRAPILVPASLVEQMRTG-SVIVDVAVDQ  135 (168)
T ss_dssp             CTTSSCCCCBCHHHHTTSCTT-CEEEETTCTT
T ss_pred             cCCcccCeeecHHHHhhcCCC-cEEEEeecCC
Confidence            322      236788999997 9999997654

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=97.88  E-value=5.3e-06  Score=69.81  Aligned_cols=110  Identities=18%  Similarity=0.210  Sum_probs=78.1

Q ss_pred             cccchhhhhhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCEEEcCCCC-
Q 018072          176 LSCGVSTGLGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDFVNTSEH-  250 (361)
Q Consensus       176 l~~~~~ta~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~vv~~~~~-  250 (361)
                      +..+...|.  +.+..++++|++||.+|+|. |+.++.+|+..|. +|++++.+++-.+.+    +++|.+.+.....+ 
T Consensus        61 is~P~~~a~--ml~~L~l~~g~~VLeIGsGs-GY~taila~l~g~-~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~  136 (215)
T d1jg1a_          61 VSAPHMVAI--MLEIANLKPGMNILEVGTGS-GWNAALISEIVKT-DVYTIERIPELVEFAKRNLERAGVKNVHVILGDG  136 (215)
T ss_dssp             ECCHHHHHH--HHHHHTCCTTCCEEEECCTT-SHHHHHHHHHHCS-CEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG
T ss_pred             hhhhhhHHH--HHHhhccCccceEEEecCCC-ChhHHHHHHhhCc-eeEEEeccHHHHHHHHHHHHHcCCceeEEEECcc
Confidence            333555554  35778999999999999876 8888888888785 799999998766555    44677654332221 


Q ss_pred             CccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEE
Q 018072          251 DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       251 ~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~  296 (361)
                      ...+      ...+.||+|+.+.+-+..-...+++|+++ |+++..
T Consensus       137 ~~g~------~~~~pfD~Iiv~~a~~~ip~~l~~qL~~g-GrLv~p  175 (215)
T d1jg1a_         137 SKGF------PPKAPYDVIIVTAGAPKIPEPLIEQLKIG-GKLIIP  175 (215)
T ss_dssp             GGCC------GGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             ccCC------cccCcceeEEeecccccCCHHHHHhcCCC-CEEEEE
Confidence            1000      11237999999887766667889999997 999864

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.69  E-value=2.7e-05  Score=65.34  Aligned_cols=102  Identities=21%  Similarity=0.261  Sum_probs=73.5

Q ss_pred             hhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHH----cCCCEEEcC-CCCCccHHHHHHH
Q 018072          187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNT-SEHDRPIQEVIAE  260 (361)
Q Consensus       187 ~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~----~G~~~vv~~-~~~~~~~~~~i~~  260 (361)
                      +.+..++++|++||-+|+|. |..++.+|+..|. .+|++++.+++..+.+++    .+.+.+... .+....+      
T Consensus        67 ~l~~l~l~~g~~VLdiG~Gt-G~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~------  139 (213)
T d1dl5a1          67 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV------  139 (213)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC------
T ss_pred             HHHhhhccccceEEEecCcc-chhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHcc------
Confidence            45778899999999999987 8888899988763 489999999988877755    444432221 1111000      


Q ss_pred             HcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEE
Q 018072          261 MTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       261 ~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~  296 (361)
                      ...+.||+|+.+..-....+..++.|+++ |+++..
T Consensus       140 ~~~~~fD~I~~~~~~~~~p~~l~~~LkpG-G~lv~p  174 (213)
T d1dl5a1         140 PEFSPYDVIFVTVGVDEVPETWFTQLKEG-GRVIVP  174 (213)
T ss_dssp             GGGCCEEEEEECSBBSCCCHHHHHHEEEE-EEEEEE
T ss_pred             ccccchhhhhhhccHHHhHHHHHHhcCCC-cEEEEE
Confidence            11236999999877655667788999997 999773

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.66  E-value=0.0001  Score=59.12  Aligned_cols=73  Identities=21%  Similarity=0.237  Sum_probs=56.2

Q ss_pred             hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCEEEcCCCCCccHHHHHHHHcCCCc
Q 018072          188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGV  266 (361)
Q Consensus       188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~vv~~~~~~~~~~~~i~~~~~~g~  266 (361)
                      ++...+.++.+|+|+|+|+++.+++..++..|.++|.++.|+.+|.+.+.+ ++... ++...             ...+
T Consensus         9 l~~~~~~~~~~vlIlGaGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~-~~~~~-------------~~~~   74 (167)
T d1npya1           9 IEKYHLNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAY-INSLE-------------NQQA   74 (167)
T ss_dssp             HHHTTCCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEE-ESCCT-------------TCCC
T ss_pred             HHHcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhh-hhccc-------------ccch
Confidence            455666778999999999999999999999998899999999998777654 55433 22111             1258


Q ss_pred             cEEEEccC
Q 018072          267 DRSVECTG  274 (361)
Q Consensus       267 Dvvid~~g  274 (361)
                      |+||+|+.
T Consensus        75 DliINaTp   82 (167)
T d1npya1          75 DILVNVTS   82 (167)
T ss_dssp             SEEEECSS
T ss_pred             hhheeccc
Confidence            99999875

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=97.61  E-value=9.1e-05  Score=63.48  Aligned_cols=104  Identities=25%  Similarity=0.201  Sum_probs=73.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEE-EcCCCCCccHHHHHHHHcC--CCccEEE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTN--GGVDRSV  270 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~v-v~~~~~~~~~~~~i~~~~~--~g~Dvvi  270 (361)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+++.+...+ .|..+. .++.+.+.+...  +++|+++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~G~iDiLV   81 (248)
T d2d1ya1           4 AGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGGAFFQVDLEDE-RERVRFVEEAAYALGRVDVLV   81 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTCEEEECCTTCH-HHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeEEEEeCCCH-HHHHHHHHHHHHhcCCCCeEE
Confidence            6899999987 8999999999999999 99999999999998888877543 222222 223333433322  3799999


Q ss_pred             EccCCh----------H---------------HHHHHHHHhcC-CCcEEEEEcCCC
Q 018072          271 ECTGNI----------D---------------NMISAFECVHD-GWGVAVLVGVPS  300 (361)
Q Consensus       271 d~~g~~----------~---------------~~~~~~~~l~~-~~G~iv~~g~~~  300 (361)
                      +++|..          +               ....+++.|.+ ++|+++.++...
T Consensus        82 nnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~  137 (248)
T d2d1ya1          82 NNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQ  137 (248)
T ss_dssp             ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGG
T ss_pred             EeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccc
Confidence            998741          1               12455566654 228999987544

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=97.58  E-value=3.7e-05  Score=65.97  Aligned_cols=102  Identities=16%  Similarity=0.204  Sum_probs=69.8

Q ss_pred             hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHH----cC-CCEEEcCCCCCccHHHHHHHH
Q 018072          188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FG-VTDFVNTSEHDRPIQEVIAEM  261 (361)
Q Consensus       188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~----~G-~~~vv~~~~~~~~~~~~i~~~  261 (361)
                      ....+++||++||=+|+|. |.++..+|++.|. .+|++++.+++.++.+++    ++ ...+. ....+  +.+.   +
T Consensus        78 i~~l~i~pG~rVLEiG~Gs-G~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~-~~~~D--i~~~---~  150 (250)
T d1yb2a1          78 IMRCGLRPGMDILEVGVGS-GNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVR-TSRSD--IADF---I  150 (250)
T ss_dssp             ---CCCCTTCEEEEECCTT-SHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEE-EECSC--TTTC---C
T ss_pred             HHHcCCCCcCEEEEeeeeC-cHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCceE-EEEee--eecc---c
Confidence            4678999999999999876 7778888888753 489999999999888865    22 22221 11111  1111   2


Q ss_pred             cCCCccEEEEccCC-hHHHHHHHHHhcCCCcEEEEEc
Q 018072          262 TNGGVDRSVECTGN-IDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       262 ~~~g~Dvvid~~g~-~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      .++.||.|+-.... ...++.+.+.|+++ |+++.+.
T Consensus       151 ~~~~fD~V~ld~p~p~~~l~~~~~~LKpG-G~lv~~~  186 (250)
T d1yb2a1         151 SDQMYDAVIADIPDPWNHVQKIASMMKPG-SVATFYL  186 (250)
T ss_dssp             CSCCEEEEEECCSCGGGSHHHHHHTEEEE-EEEEEEE
T ss_pred             ccceeeeeeecCCchHHHHHHHHHhcCCC-ceEEEEe
Confidence            23379988855544 35788999999997 9998764

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=97.56  E-value=0.00034  Score=59.92  Aligned_cols=105  Identities=16%  Similarity=0.167  Sum_probs=71.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCCCEEEcCCC-CC-ccHHHHHHHHcC--CCccE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDFVNTSE-HD-RPIQEVIAEMTN--GGVDR  268 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~-~~~G~~~vv~~~~-~~-~~~~~~i~~~~~--~g~Dv  268 (361)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+ ++++........+ .+ .++.+.+.....  +++|+
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDi   83 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCe
Confidence            5788999987 8999999999999999 899999999887765 4566654332222 22 223333333222  37899


Q ss_pred             EEEccCChH-------------------------HHHHHHHHhcCCCcEEEEEcCCC
Q 018072          269 SVECTGNID-------------------------NMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       269 vid~~g~~~-------------------------~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      +++++|...                         ....+++.|+..+|+++.++...
T Consensus        84 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~  140 (253)
T d1hxha_          84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVS  140 (253)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGG
T ss_pred             EEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchh
Confidence            999998411                         13456667765449999997644

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.49  E-value=0.00019  Score=61.15  Aligned_cols=79  Identities=23%  Similarity=0.346  Sum_probs=56.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCEE-EcCCCCCccHHHHHHHHcC--CCccEE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDF-VNTSEHDRPIQEVIAEMTN--GGVDRS  269 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~v-v~~~~~~~~~~~~i~~~~~--~g~Dvv  269 (361)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+.+ +++..+ .|..+. +++.+.+.....  +++|++
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g~iDil   81 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGAHPVVMDVADP-ASVERGFAEALAHLGRLDGV   81 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTCEEEECCTTCH-HHHHHHHHHHHHHHSSCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCeEEEEecCCH-HHHHHHHHHHHHhcCCceEE
Confidence            4789999988 8999999999999999 89999999998887654 555432 222222 224444433322  379999


Q ss_pred             EEccCC
Q 018072          270 VECTGN  275 (361)
Q Consensus       270 id~~g~  275 (361)
                      ++++|.
T Consensus        82 VnnAG~   87 (242)
T d1ulsa_          82 VHYAGI   87 (242)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999874

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=97.48  E-value=3.7e-05  Score=64.87  Aligned_cols=100  Identities=20%  Similarity=0.259  Sum_probs=70.5

Q ss_pred             hhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCC--CE-EEcCCCCCccHHHHHHHHcC
Q 018072          187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV--TD-FVNTSEHDRPIQEVIAEMTN  263 (361)
Q Consensus       187 ~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~--~~-vv~~~~~~~~~~~~i~~~~~  263 (361)
                      +.+...+++|++||-+|+|. |..++.+|+.. . +|++++.+++..+.+++.-.  .. .+...+....+      ...
T Consensus        62 ml~~L~l~~g~~VLdIG~Gs-Gy~ta~La~l~-~-~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~~~g~------~~~  132 (224)
T d1vbfa_          62 MLDELDLHKGQKVLEIGTGI-GYYTALIAEIV-D-KVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGY------EEE  132 (224)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHS-S-EEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCC------GGG
T ss_pred             HHHHhhhcccceEEEecCCC-CHHHHHHHHHh-c-ccccccccHHHHHHHHHHHhcccccccccCchhhcc------hhh
Confidence            35778999999999999974 78888888764 3 89999999998888876321  11 11111111001      112


Q ss_pred             CCccEEEEccCChHHHHHHHHHhcCCCcEEEEE
Q 018072          264 GGVDRSVECTGNIDNMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       264 ~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~  296 (361)
                      +.||+|+-+.+-+......+++|+++ |+++..
T Consensus       133 ~pfD~Iiv~~a~~~ip~~l~~qLk~G-GrLV~p  164 (224)
T d1vbfa_         133 KPYDRVVVWATAPTLLCKPYEQLKEG-GIMILP  164 (224)
T ss_dssp             CCEEEEEESSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             hhHHHHHhhcchhhhhHHHHHhcCCC-CEEEEE
Confidence            36999998877666677888999997 999875

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.35  E-value=0.00079  Score=57.20  Aligned_cols=77  Identities=22%  Similarity=0.274  Sum_probs=55.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCCEEEcCCCCCccHHHHHHHHcC--CCccEEE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDFVNTSEHDRPIQEVIAEMTN--GGVDRSV  270 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~~~vv~~~~~~~~~~~~i~~~~~--~g~Dvvi  270 (361)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+. +++....+..+-.+.   +.+++..+  +++|+++
T Consensus         6 ~GK~~lITGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~---~~v~~~~~~~g~iDilV   81 (244)
T d1pr9a_           6 AGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDLGDW---EATERALGSVGPVDLLV   81 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCH---HHHHHHHTTCCCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeCCCH---HHHHHHHHHhCCceEEE
Confidence            6899999988 8999999999999999 8999999999887764 344433333332231   22333333  3799999


Q ss_pred             EccCC
Q 018072          271 ECTGN  275 (361)
Q Consensus       271 d~~g~  275 (361)
                      +++|.
T Consensus        82 nnAg~   86 (244)
T d1pr9a_          82 NNAAV   86 (244)
T ss_dssp             ECCCC
T ss_pred             ecccc
Confidence            98874

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.34  E-value=0.00046  Score=54.71  Aligned_cols=77  Identities=22%  Similarity=0.253  Sum_probs=57.3

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEE
Q 018072          191 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE-EAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRS  269 (361)
Q Consensus       191 ~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~-~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvv  269 (361)
                      .+--.+.+|||+|+|.+|.+.++.+...|...++++.++.+|.+ +++++|.. .+.+.+    +.+.+.     .+|+|
T Consensus        19 ~~~l~~~~ilviGaG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~-~~~~~~----~~~~l~-----~~Div   88 (159)
T d1gpja2          19 LGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRFDE----LVDHLA-----RSDVV   88 (159)
T ss_dssp             HSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCGGG----HHHHHH-----TCSEE
T ss_pred             hCCcccCeEEEECCCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcc-cccchh----HHHHhc-----cCCEE
Confidence            33346789999999999999999999999988999999987765 55677753 333221    333332     48999


Q ss_pred             EEccCChH
Q 018072          270 VECTGNID  277 (361)
Q Consensus       270 id~~g~~~  277 (361)
                      |.|++.+.
T Consensus        89 i~atss~~   96 (159)
T d1gpja2          89 VSATAAPH   96 (159)
T ss_dssp             EECCSSSS
T ss_pred             EEecCCCC
Confidence            99998754

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=97.34  E-value=0.00068  Score=57.58  Aligned_cols=102  Identities=23%  Similarity=0.339  Sum_probs=69.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCCE---EEcCCCCCccHHHHHHHHcC--CCcc
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTD---FVNTSEHDRPIQEVIAEMTN--GGVD  267 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~~~---vv~~~~~~~~~~~~i~~~~~--~g~D  267 (361)
                      +|.++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+. +++...   ..|..+. .++.+.+.....  +++|
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~g~iD   80 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGA-KVIGTATSENGAQAISDYLGANGKGLMLNVTDP-ASIESVLEKIRAEFGEVD   80 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCTTCH-HHHHHHHHHHHHHTCSCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCH-HHhhhhhhhhhcccCCcc
Confidence            4788999987 8999999999999999 9999999999877664 355432   2333322 223334443322  3799


Q ss_pred             EEEEccCChH-------------------------HHHHHHHHhc--CCCcEEEEEcCC
Q 018072          268 RSVECTGNID-------------------------NMISAFECVH--DGWGVAVLVGVP  299 (361)
Q Consensus       268 vvid~~g~~~-------------------------~~~~~~~~l~--~~~G~iv~~g~~  299 (361)
                      ++++++|...                         ....+++.|.  .+ |+++.++..
T Consensus        81 ilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~-G~II~isS~  138 (243)
T d1q7ba_          81 ILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRH-GRIITIGSV  138 (243)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-EEEEEECCH
T ss_pred             eehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCC-CEeeeecch
Confidence            9999987411                         1245556663  44 999999753

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=97.30  E-value=0.0003  Score=60.75  Aligned_cols=104  Identities=18%  Similarity=0.263  Sum_probs=74.0

Q ss_pred             hhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHH
Q 018072          187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEM  261 (361)
Q Consensus       187 ~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~  261 (361)
                      +...++++||++||=+|+|. |.+++.+|+..+. .+|+++|.+++..+.+++    +|....+.....+  +.   ..+
T Consensus        95 Ii~~l~i~pG~~VLDiG~Gs-G~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~d--~~---~~~  168 (266)
T d1o54a_          95 IAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRD--IS---EGF  168 (266)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCC--GG---GCC
T ss_pred             HHHhhCCCCCCEEEECCCCC-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEecc--cc---ccc
Confidence            35778999999999999877 7888888988763 489999999998888754    5653222212211  10   011


Q ss_pred             cCCCccEEEEccCCh-HHHHHHHHHhcCCCcEEEEEc
Q 018072          262 TNGGVDRSVECTGNI-DNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       262 ~~~g~Dvvid~~g~~-~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      ....+|.|+.-...+ ..++.+.+.|+++ |+++.+.
T Consensus       169 ~~~~~D~V~~d~p~p~~~l~~~~~~LKpG-G~lv~~~  204 (266)
T d1o54a_         169 DEKDVDALFLDVPDPWNYIDKCWEALKGG-GRFATVC  204 (266)
T ss_dssp             SCCSEEEEEECCSCGGGTHHHHHHHEEEE-EEEEEEE
T ss_pred             cccceeeeEecCCCHHHHHHHHHhhcCCC-CEEEEEe
Confidence            222688877766664 4789999999997 9998764

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.30  E-value=0.00036  Score=58.66  Aligned_cols=97  Identities=16%  Similarity=0.203  Sum_probs=68.2

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHH----cCCC-----EE-EcCCCCCccHHHHHHH
Q 018072          192 KPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVT-----DF-VNTSEHDRPIQEVIAE  260 (361)
Q Consensus       192 ~~~~g~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~----~G~~-----~v-v~~~~~~~~~~~~i~~  260 (361)
                      .+++|++||-+|+|. |..++.+|+..|. .+|++++.+++-.+.+++    .+..     .+ +...+....+      
T Consensus        73 ~l~~g~~VLdiG~Gs-Gy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~------  145 (224)
T d1i1na_          73 QLHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY------  145 (224)
T ss_dssp             TSCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC------
T ss_pred             ccCCCCeEEEecCCC-CHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeeccccc------
Confidence            789999999999976 8888888888763 489999999987777643    2221     11 1111110000      


Q ss_pred             HcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEE
Q 018072          261 MTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       261 ~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~  296 (361)
                      ...+.||+|+.+..-+...+..++.|+++ |+++..
T Consensus       146 ~~~~~fD~I~~~~~~~~ip~~l~~~LkpG-G~LV~p  180 (224)
T d1i1na_         146 AEEAPYDAIHVGAAAPVVPQALIDQLKPG-GRLILP  180 (224)
T ss_dssp             GGGCCEEEEEECSBBSSCCHHHHHTEEEE-EEEEEE
T ss_pred             chhhhhhhhhhhcchhhcCHHHHhhcCCC-cEEEEE
Confidence            11137999999877766778889999997 999874

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.28  E-value=0.00057  Score=58.37  Aligned_cols=104  Identities=16%  Similarity=0.181  Sum_probs=70.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC-EEEcCCCCC-ccHHHHHHHHcC--CCccEE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHD-RPIQEVIAEMTN--GGVDRS  269 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~-~vv~~~~~~-~~~~~~i~~~~~--~g~Dvv  269 (361)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+.+.... ..+.-+-.+ +++.+.+.+...  +++|++
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDil   83 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCV   83 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            5889999988 8999999999999999 899999999998887654333 333222222 223333333322  379999


Q ss_pred             EEccCChH--------------------------HHHHHHHHhcCCCcEEEEEcCC
Q 018072          270 VECTGNID--------------------------NMISAFECVHDGWGVAVLVGVP  299 (361)
Q Consensus       270 id~~g~~~--------------------------~~~~~~~~l~~~~G~iv~~g~~  299 (361)
                      ++++|...                          ....+++.|++++|+++.++..
T Consensus        84 VnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~  139 (250)
T d1ydea1          84 VNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSL  139 (250)
T ss_dssp             EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCH
T ss_pred             EecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccc
Confidence            99987310                          1245555665534899998753

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=97.28  E-value=0.00045  Score=56.45  Aligned_cols=76  Identities=21%  Similarity=0.253  Sum_probs=54.8

Q ss_pred             CCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-----cCCC-EEEcCCCCCccHHHHHHHHcCCC
Q 018072          193 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVT-DFVNTSEHDRPIQEVIAEMTNGG  265 (361)
Q Consensus       193 ~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-----~G~~-~vv~~~~~~~~~~~~i~~~~~~g  265 (361)
                      -=+|.+++|+|+ |++|...++.+...|+ +|+.+++++++.+.+.+     .... ...|..+     .+.+.+.. ++
T Consensus        20 ~l~gK~vlItGasgGIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~-----~~~~~~~~-~~   92 (191)
T d1luaa1          20 SVKGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETAD-----DASRAEAV-KG   92 (191)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCS-----HHHHHHHT-TT
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHhhcc-chhhcccchHHHHHHHHHHHhccchhhhhhhccc-----HHHHHHHh-cC
Confidence            347899999997 9999999999999999 89999999988776643     2222 2333332     12333333 36


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++|+++|.
T Consensus        93 iDilin~Ag~  102 (191)
T d1luaa1          93 AHFVFTAGAI  102 (191)
T ss_dssp             CSEEEECCCT
T ss_pred             cCeeeecCcc
Confidence            8999999874

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.25  E-value=0.0012  Score=55.93  Aligned_cols=77  Identities=18%  Similarity=0.226  Sum_probs=54.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCCEEEcCCCCCccHHHHHHHHcC--CCccEEE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDFVNTSEHDRPIQEVIAEMTN--GGVDRSV  270 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~~~vv~~~~~~~~~~~~i~~~~~--~g~Dvvi  270 (361)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+. +++....+..+-.+.   +.+++..+  +++|+++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~---~~v~~~~~~~g~iDilV   79 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGIEPVCVDLGDW---DATEKALGGIGPVDLLV   79 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCH---HHHHHHHTTCCCCSEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeCCCH---HHHHHHHHHcCCCeEEE
Confidence            5889999988 8999999999999999 9999999998877664 444333333332321   22333333  3799999


Q ss_pred             EccCC
Q 018072          271 ECTGN  275 (361)
Q Consensus       271 d~~g~  275 (361)
                      +++|.
T Consensus        80 nnAg~   84 (242)
T d1cyda_          80 NNAAL   84 (242)
T ss_dssp             ECCCC
T ss_pred             ECCcc
Confidence            99874

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.23  E-value=0.00047  Score=58.71  Aligned_cols=79  Identities=18%  Similarity=0.208  Sum_probs=56.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  273 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~  273 (361)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+.+.........+....+..+...... ++.|+++++.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~id~lVn~a   82 (245)
T d2ag5a1           5 DGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEV-ERLDVLFNVA   82 (245)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHC-SCCSEEEECC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhccCCceeeeecccccccccccccc-ccceeEEecc
Confidence            5788999987 8999999999999999 99999999999888776443333222222222333333322 3799999988


Q ss_pred             CC
Q 018072          274 GN  275 (361)
Q Consensus       274 g~  275 (361)
                      |.
T Consensus        83 g~   84 (245)
T d2ag5a1          83 GF   84 (245)
T ss_dssp             CC
T ss_pred             cc
Confidence            74

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.21  E-value=9.1e-05  Score=62.38  Aligned_cols=99  Identities=17%  Similarity=0.251  Sum_probs=64.4

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHc---CC---CeEEEEcCChhhHHHHHHc---------CCCEEE-cCCCCCccH
Q 018072          191 AKPERGSSVAVFGLGAVGLAAAEGARIA---GA---SRIIGVDRSSKRFEEAKKF---------GVTDFV-NTSEHDRPI  254 (361)
Q Consensus       191 ~~~~~g~~VlI~G~g~vG~~a~~~a~~~---g~---~~Vi~~~~~~~~~~~~~~~---------G~~~vv-~~~~~~~~~  254 (361)
                      ..+++|++||.+|+|. |+.++.+++..   |.   .+|++++.+++-.+.+++.         +...+. ...+....+
T Consensus        76 ~~l~~g~~VLeIGtGs-GY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~~  154 (223)
T d1r18a_          76 DHLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGY  154 (223)
T ss_dssp             TTCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCC
T ss_pred             hccCCCCeEEEecCCC-CHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEeccccccc
Confidence            3789999999998754 55555555544   42   3799999999877666431         222221 111111000


Q ss_pred             HHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEE-Ec
Q 018072          255 QEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVL-VG  297 (361)
Q Consensus       255 ~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~-~g  297 (361)
                            ...+.||+|+-+.+-+...+..+++|+++ |+++. +|
T Consensus       155 ------~~~~~fD~Iiv~~a~~~~p~~l~~~Lk~g-G~lV~pvg  191 (223)
T d1r18a_         155 ------PPNAPYNAIHVGAAAPDTPTELINQLASG-GRLIVPVG  191 (223)
T ss_dssp             ------GGGCSEEEEEECSCBSSCCHHHHHTEEEE-EEEEEEES
T ss_pred             ------ccccceeeEEEEeechhchHHHHHhcCCC-cEEEEEEe
Confidence                  11237999999887766677889999997 99976 44

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=97.20  E-value=0.0013  Score=56.32  Aligned_cols=80  Identities=21%  Similarity=0.282  Sum_probs=56.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCEE-EcCCCCC-ccH---HHHHHHHcCC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF-VNTSEHD-RPI---QEVIAEMTNG  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~v-v~~~~~~-~~~---~~~i~~~~~~  264 (361)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+    ++.+.... +..+-.+ .++   .+.+.+..++
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g   83 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG   83 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            6899999987 8999999999999999 999999999776654    44565442 2222222 122   2333344445


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      ..|++++++|.
T Consensus        84 ~idilinnag~   94 (258)
T d1ae1a_          84 KLNILVNNAGV   94 (258)
T ss_dssp             CCCEEEECCCC
T ss_pred             CcEEEeccccc
Confidence            68999998875

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.16  E-value=0.0039  Score=45.96  Aligned_cols=93  Identities=14%  Similarity=-0.010  Sum_probs=62.9

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh--hhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEc
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS--KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  272 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~--~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~  272 (361)
                      .|.+|||+|+|.+|..-++.+...|+ .|++++...  +-.+++++-.. ..+...-.+.++         .++++|+-+
T Consensus        11 ~~k~vlVvG~G~va~~ka~~ll~~ga-~v~v~~~~~~~~~~~~~~~~~i-~~~~~~~~~~dl---------~~~~lv~~a   79 (113)
T d1pjqa1          11 RDRDCLIVGGGDVAERKARLLLEAGA-RLTVNALTFIPQFTVWANEGML-TLVEGPFDETLL---------DSCWLAIAA   79 (113)
T ss_dssp             BTCEEEEECCSHHHHHHHHHHHHTTB-EEEEEESSCCHHHHHHHTTTSC-EEEESSCCGGGG---------TTCSEEEEC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeccCChHHHHHHhcCCc-eeeccCCCHHHh---------CCCcEEeec
Confidence            36899999999999999999999999 777775543  33333333222 222221111111         268999999


Q ss_pred             cCChHHHHHHHHHhcCCCcEEEEEcCC
Q 018072          273 TGNIDNMISAFECVHDGWGVAVLVGVP  299 (361)
Q Consensus       273 ~g~~~~~~~~~~~l~~~~G~iv~~g~~  299 (361)
                      ++.+..-....+..++. |.++.+...
T Consensus        80 t~d~~~n~~i~~~a~~~-~ilVNv~D~  105 (113)
T d1pjqa1          80 TDDDTVNQRVSDAAESR-RIFCNVVDA  105 (113)
T ss_dssp             CSCHHHHHHHHHHHHHT-TCEEEETTC
T ss_pred             CCCHHHHHHHHHHHHHc-CCEEEeCCC
Confidence            99966656777788887 888887543

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.16  E-value=0.0015  Score=51.99  Aligned_cols=97  Identities=11%  Similarity=-0.009  Sum_probs=63.4

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  275 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~  275 (361)
                      +.+|+|+|+|.+|...++.+...|. .|++++++.++.+.+.+-.....+....... ....-..+  ...|+++.++..
T Consensus         2 ~K~IliiGaG~~G~~~a~~L~~~g~-~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~-~~~~~~~i--~~~~~~i~~~~~   77 (182)
T d1e5qa1           2 TKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQHSTPISLDVND-DAALDAEV--AKHDLVISLIPY   77 (182)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESCHHHHHHHHTTCTTEEEEECCTTC-HHHHHHHH--TTSSEEEECSCG
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECChHHHHHHHhcccccccccccccc-hhhhHhhh--hccceeEeeccc
Confidence            5799999999999999998888898 8999999999998887633333332222221 11111112  246888888776


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEc
Q 018072          276 IDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       276 ~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      ......+..++... -.++...
T Consensus        78 ~~~~~~~~~~~~~~-~~~~~~~   98 (182)
T d1e5qa1          78 TFHATVIKSAIRQK-KHVVTTS   98 (182)
T ss_dssp             GGHHHHHHHHHHHT-CEEECSS
T ss_pred             hhhhHHHHHHHhhc-cceeecc
Confidence            55555555555554 4554443

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.12  E-value=0.0012  Score=52.62  Aligned_cols=73  Identities=18%  Similarity=0.192  Sum_probs=51.7

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCC-EEEcCCCCCccHHHHHHHHcCCCccEEE
Q 018072          193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVT-DFVNTSEHDRPIQEVIAEMTNGGVDRSV  270 (361)
Q Consensus       193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~-~vv~~~~~~~~~~~~i~~~~~~g~Dvvi  270 (361)
                      ..+|.+|||+|+|+.+.+++..+..+|. +|+.+.|+.+|.+.+.+ +... .+......+         .....+|++|
T Consensus        15 ~~~~k~vlIlGaGGaarai~~al~~~g~-~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~---------~~~~~~dliI   84 (170)
T d1nyta1          15 IRPGLRILLIGAGGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTGSIQALSMDE---------LEGHEFDLII   84 (170)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGSSEEECCSGG---------GTTCCCSEEE
T ss_pred             CCCCCEEEEECCcHHHHHHHHHhcccce-EEEeccchHHHHHHHHHHHhhccccccccccc---------ccccccceee
Confidence            4678999999999999999999999998 79999999988777654 2211 111111111         1123689999


Q ss_pred             EccCC
Q 018072          271 ECTGN  275 (361)
Q Consensus       271 d~~g~  275 (361)
                      +|+..
T Consensus        85 N~Tp~   89 (170)
T d1nyta1          85 NATSS   89 (170)
T ss_dssp             ECCSC
T ss_pred             ccccc
Confidence            99864

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.12  E-value=0.00064  Score=57.84  Aligned_cols=80  Identities=15%  Similarity=0.161  Sum_probs=55.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCCEE-EcCCCCC-ccHHHHHHHHcC--CCccE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDF-VNTSEHD-RPIQEVIAEMTN--GGVDR  268 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~~~v-v~~~~~~-~~~~~~i~~~~~--~g~Dv  268 (361)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+. +++.... +..+-.+ +++.+.+++...  +++|+
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idi   83 (244)
T d1nffa_           5 TGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV   83 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeE
Confidence            5789999988 8999999999999999 8999999999887664 4544322 2222222 223333433332  37999


Q ss_pred             EEEccCC
Q 018072          269 SVECTGN  275 (361)
Q Consensus       269 vid~~g~  275 (361)
                      +++++|.
T Consensus        84 linnAG~   90 (244)
T d1nffa_          84 LVNNAGI   90 (244)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9999885

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=97.10  E-value=0.00055  Score=58.67  Aligned_cols=79  Identities=22%  Similarity=0.313  Sum_probs=56.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCCCEEE---cCCCCCccHHHHHHHHcC--CCcc
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDFV---NTSEHDRPIQEVIAEMTN--GGVD  267 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~-~~~G~~~vv---~~~~~~~~~~~~i~~~~~--~g~D  267 (361)
                      +|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+ +++|.....   |..+. .++.+.+.....  +++|
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~-~~v~~~~~~~~~~~g~iD   81 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGA-RVAIADINLEAARATAAEIGPAACAIALDVTDQ-ASIDRCVAELLDRWGSID   81 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTE-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCH-HHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEeeCCCH-HHHHHHHHHHHHHhCCcc
Confidence            4788999988 8999999999999999 899999999887765 457765432   22222 223333333322  3799


Q ss_pred             EEEEccCC
Q 018072          268 RSVECTGN  275 (361)
Q Consensus       268 vvid~~g~  275 (361)
                      ++++++|.
T Consensus        82 ilVnnAg~   89 (256)
T d1k2wa_          82 ILVNNAAL   89 (256)
T ss_dssp             EEEECCCC
T ss_pred             EEEeeccc
Confidence            99999884

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.10  E-value=0.0015  Score=51.69  Aligned_cols=43  Identities=33%  Similarity=0.494  Sum_probs=39.0

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCC
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV  241 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~  241 (361)
                      +|.|+|+|.+|...+..++..|. +|+++++++++.+.+++.|.
T Consensus         2 kI~iIG~G~mG~~lA~~l~~~g~-~V~~~d~~~~~~~~a~~~~~   44 (165)
T d2f1ka2           2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQL   44 (165)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTS
T ss_pred             EEEEEeecHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHhhc
Confidence            68899999999988888888898 99999999999999998885

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.09  E-value=0.0044  Score=46.93  Aligned_cols=75  Identities=17%  Similarity=0.263  Sum_probs=56.5

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  276 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~  276 (361)
                      +|+|+|.|.+|...++.+...|. .|++++.++++.+.+.+ ++.. ++.-+..+   .+.+++..-..+|.++-++.++
T Consensus         2 ~IvI~G~G~~G~~la~~L~~~g~-~v~vid~d~~~~~~~~~~~~~~-vi~Gd~~~---~~~l~~~~i~~a~~vv~~t~~d   76 (132)
T d1lssa_           2 YIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDAL-VINGDCTK---IKTLEDAGIEDADMYIAVTGKE   76 (132)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSE-EEESCTTS---HHHHHHTTTTTCSEEEECCSCH
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-CcceecCChhhhhhhhhhhhhh-hccCcccc---hhhhhhcChhhhhhhcccCCcH
Confidence            68999999999999999999998 99999999999988765 5654 44333333   2344444334789999998885


Q ss_pred             H
Q 018072          277 D  277 (361)
Q Consensus       277 ~  277 (361)
                      +
T Consensus        77 ~   77 (132)
T d1lssa_          77 E   77 (132)
T ss_dssp             H
T ss_pred             H
Confidence            4

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=97.07  E-value=0.00093  Score=57.30  Aligned_cols=80  Identities=23%  Similarity=0.288  Sum_probs=55.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCEE-EcCCCCC-ccHHHHHHHHcC--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDF-VNTSEHD-RPIQEVIAEMTN--GG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~v-v~~~~~~-~~~~~~i~~~~~--~g  265 (361)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+.    +.|.+.. +.-+-.+ .++.+.+.....  ++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK   82 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5889999988 8999999999999999 8999999998876653    3455432 2222122 223333333322  37


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++++++|.
T Consensus        83 iDilVnnaG~   92 (260)
T d1zema1          83 IDFLFNNAGY   92 (260)
T ss_dssp             CCEEEECCCC
T ss_pred             CCeehhhhcc
Confidence            9999998873

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=97.06  E-value=0.0012  Score=56.72  Aligned_cols=79  Identities=16%  Similarity=0.254  Sum_probs=54.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCC---CEEEcCCCCC-ccHHHHHHHHcC--CCc
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGV---TDFVNTSEHD-RPIQEVIAEMTN--GGV  266 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~---~~vv~~~~~~-~~~~~~i~~~~~--~g~  266 (361)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+.+ ++.   ...+..+-.+ +++.+.+.....  +.+
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL   83 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCc
Confidence            5789999987 8999999999999999 89999999998877643 332   2222222222 224333333322  379


Q ss_pred             cEEEEccC
Q 018072          267 DRSVECTG  274 (361)
Q Consensus       267 Dvvid~~g  274 (361)
                      |++++++|
T Consensus        84 D~lVnnAG   91 (268)
T d2bgka1          84 DIMFGNVG   91 (268)
T ss_dssp             CEEEECCC
T ss_pred             ceeccccc
Confidence            99999887

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=97.06  E-value=0.002  Score=55.16  Aligned_cols=80  Identities=19%  Similarity=0.221  Sum_probs=54.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCEE-EcCCCCC-ccHHHHHHHH---cCC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDF-VNTSEHD-RPIQEVIAEM---TNG  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~v-v~~~~~~-~~~~~~i~~~---~~~  264 (361)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+.    +.|.... +..+-.+ .++.+.+...   .++
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   85 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG   85 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence            5889999988 8999999999999999 8999999998876553    3454332 2222222 2233333332   233


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      .+|++++++|.
T Consensus        86 ~idilvnnAG~   96 (259)
T d2ae2a_          86 KLNILVNNAGI   96 (259)
T ss_dssp             CCCEEEECCCC
T ss_pred             CceEEEECCce
Confidence            69999999884

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=97.04  E-value=0.0008  Score=57.54  Aligned_cols=80  Identities=26%  Similarity=0.264  Sum_probs=55.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCCEE-EcCCCCC-ccHHHHHHHHcC--CCccE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDF-VNTSEHD-RPIQEVIAEMTN--GGVDR  268 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~~~v-v~~~~~~-~~~~~~i~~~~~--~g~Dv  268 (361)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+. +++.... +..+-.+ +++.+.+.....  +++|+
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   82 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDG   82 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccE
Confidence            5789999988 8999999999989999 8999999998877654 4654432 2222222 223333333322  37999


Q ss_pred             EEEccCC
Q 018072          269 SVECTGN  275 (361)
Q Consensus       269 vid~~g~  275 (361)
                      +++++|.
T Consensus        83 lVnnAg~   89 (254)
T d1hdca_          83 LVNNAGI   89 (254)
T ss_dssp             EEECCCC
T ss_pred             EEecCcc
Confidence            9999874

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.04  E-value=0.001  Score=56.78  Aligned_cols=102  Identities=23%  Similarity=0.374  Sum_probs=68.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-----HHcCCCEE-E--cCCCCCccHHHHHHHHcC--
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-----KKFGVTDF-V--NTSEHDRPIQEVIAEMTN--  263 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~-----~~~G~~~v-v--~~~~~~~~~~~~i~~~~~--  263 (361)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+     ++.|.... +  |..+. +++.+.+.....  
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~-~~v~~~~~~~~~~~   81 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNY-EEVKKLLEAVKEKF   81 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCH-HHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCH-HHHHHHHHHHHHHc
Confidence            4789999988 8999999999999999 899999998876543     34566532 2  33222 223333333322  


Q ss_pred             CCccEEEEccCChH-------------------------HHHHHHHHhcCC-CcEEEEEcC
Q 018072          264 GGVDRSVECTGNID-------------------------NMISAFECVHDG-WGVAVLVGV  298 (361)
Q Consensus       264 ~g~Dvvid~~g~~~-------------------------~~~~~~~~l~~~-~G~iv~~g~  298 (361)
                      +++|++++++|...                         ....+++.|... +|+++.++.
T Consensus        82 g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S  142 (251)
T d1vl8a_          82 GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGS  142 (251)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECC
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccccccccccccc
Confidence            37999999987411                         124566677532 279998875

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.03  E-value=0.0016  Score=56.68  Aligned_cols=103  Identities=17%  Similarity=0.189  Sum_probs=72.7

Q ss_pred             hhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCEEEcCCCCCccHHHHHHHH
Q 018072          186 ATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAEM  261 (361)
Q Consensus       186 a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~vv~~~~~~~~~~~~i~~~  261 (361)
                      -+.+.+++++|++||=+|+|- |.++..+|+..|+ +|++++.+++..+.++    +.|....+.....+  +     ..
T Consensus        52 ~~~~~l~l~~G~~VLDiGCG~-G~~~~~~a~~~g~-~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~~d--~-----~~  122 (291)
T d1kpia_          52 LALDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQG--W-----EE  122 (291)
T ss_dssp             HHHHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHSCCSSCEEEEECC--G-----GG
T ss_pred             HHHHhcCCCCCCEEEEecCcc-hHHHHHHHHhcCc-ceeeccchHHHHHHHHHHHHhhccchhhhhhhhc--c-----cc
Confidence            356888999999999999874 4467788888898 9999999998766653    45665433322222  1     12


Q ss_pred             cCCCccEEEE-----ccCC----------hHHHHHHHHHhcCCCcEEEEEcC
Q 018072          262 TNGGVDRSVE-----CTGN----------IDNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       262 ~~~g~Dvvid-----~~g~----------~~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      .++.||.|+.     .++.          +..+..+.+.|+|+ |++++-..
T Consensus       123 ~~~~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~Lkpg-G~~~l~~i  173 (291)
T d1kpia_         123 FDEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDD-GRMLLHTI  173 (291)
T ss_dssp             CCCCCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTT-CEEEEEEE
T ss_pred             cccccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCC-CceEEEEE
Confidence            3457998875     3333          34678899999998 99886543

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=97.03  E-value=0.00078  Score=58.35  Aligned_cols=79  Identities=19%  Similarity=0.303  Sum_probs=55.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCCEEEc-CCCCC-ccHHHHHHHHcC--CCccE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDFVN-TSEHD-RPIQEVIAEMTN--GGVDR  268 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~~~vv~-~~~~~-~~~~~~i~~~~~--~g~Dv  268 (361)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+. ++|...... .+-.+ .++.+.+.....  +.+|+
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idi   82 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGA-KVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDT   82 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCccc
Confidence            5889999988 8999999999999999 9999999999886654 466543222 12122 223333333322  37999


Q ss_pred             EEEccC
Q 018072          269 SVECTG  274 (361)
Q Consensus       269 vid~~g  274 (361)
                      +++++|
T Consensus        83 lvnnAG   88 (276)
T d1bdba_          83 LIPNAG   88 (276)
T ss_dssp             EECCCC
T ss_pred             cccccc
Confidence            999987

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.00  E-value=0.0027  Score=50.75  Aligned_cols=84  Identities=20%  Similarity=0.190  Sum_probs=57.9

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCC--------CccHHHHHHHHcCCCccE
Q 018072          197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEH--------DRPIQEVIAEMTNGGVDR  268 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~--------~~~~~~~i~~~~~~g~Dv  268 (361)
                      .++.|+|+|.+|++.+..+...|. .|..+++++++.+.+++.+..........        ..+..+.+     ..+|+
T Consensus         2 k~iaIiGaG~~G~~~A~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-----~~aD~   75 (184)
T d1bg6a2           2 KTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAV-----KDADV   75 (184)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHH-----TTCSE
T ss_pred             CEEEEECccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHh-----cCCCE
Confidence            589999999999999999999998 99999999999999887664322111000        00122222     25899


Q ss_pred             EEEccCChHHHHHHHHHhc
Q 018072          269 SVECTGNIDNMISAFECVH  287 (361)
Q Consensus       269 vid~~g~~~~~~~~~~~l~  287 (361)
                      +|-++... ..+..++.++
T Consensus        76 iii~v~~~-~~~~~~~~i~   93 (184)
T d1bg6a2          76 ILIVVPAI-HHASIAANIA   93 (184)
T ss_dssp             EEECSCGG-GHHHHHHHHG
T ss_pred             EEEEEchh-HHHHHHHHhh
Confidence            99999774 4444444444

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.00  E-value=0.001  Score=57.01  Aligned_cols=104  Identities=19%  Similarity=0.257  Sum_probs=71.9

Q ss_pred             hhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHH----cC---CCEEEcCCCCCccHHHHH
Q 018072          187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FG---VTDFVNTSEHDRPIQEVI  258 (361)
Q Consensus       187 ~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~----~G---~~~vv~~~~~~~~~~~~i  258 (361)
                      +....+++||++||=.|+|. |.++..+|+..|. .+|+++|.+++.++.+++    ++   .+.+... ..+  ..+  
T Consensus        88 Ii~~l~i~PG~~VLE~G~Gs-G~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~-~~d--~~~--  161 (264)
T d1i9ga_          88 IVHEGDIFPGARVLEAGAGS-GALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLV-VSD--LAD--  161 (264)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEE-CSC--GGG--
T ss_pred             HHHHhCCCCCCEEEecCcCC-cHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEE-ecc--ccc--
Confidence            35678999999999999876 8888899998864 499999999999888865    21   1222111 111  100  


Q ss_pred             HHHcCCCccEEEEccCC-hHHHHHHHHHhcCCCcEEEEEc
Q 018072          259 AEMTNGGVDRSVECTGN-IDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       259 ~~~~~~g~Dvvid~~g~-~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      ..+.++.||.||--... ...++.+.+.|+++ |+++.+-
T Consensus       162 ~~~~~~~fDaV~ldlp~P~~~l~~~~~~LkpG-G~lv~~~  200 (264)
T d1i9ga_         162 SELPDGSVDRAVLDMLAPWEVLDAVSRLLVAG-GVLMVYV  200 (264)
T ss_dssp             CCCCTTCEEEEEEESSCGGGGHHHHHHHEEEE-EEEEEEE
T ss_pred             ccccCCCcceEEEecCCHHHHHHHHHhccCCC-CEEEEEe
Confidence            01123378976655544 34788999999997 9998774

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=96.98  E-value=0.00033  Score=59.54  Aligned_cols=103  Identities=22%  Similarity=0.234  Sum_probs=70.3

Q ss_pred             hhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHH
Q 018072          186 ATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEM  261 (361)
Q Consensus       186 a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~  261 (361)
                      .+.+..+++||++||=+|+|. |..+..+++..|+ +|+++|.+++-.+.+++    .|....+.....+  +.+   ..
T Consensus        24 ~l~~~~~l~pg~~VLDiGCG~-G~~~~~la~~~~~-~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d--~~~---~~   96 (245)
T d1nkva_          24 TLGRVLRMKPGTRILDLGSGS-GEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHND--AAG---YV   96 (245)
T ss_dssp             HHHHHTCCCTTCEEEEETCTT-CHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESC--CTT---CC
T ss_pred             HHHHHcCCCCCCEEEEEcCCC-CHHHHHHHHhcCC-EEEEEecccchhhHHHHHHHHhhccccchhhhhH--Hhh---cc
Confidence            456788999999999999875 5667778888887 99999999987776654    4653211111111  100   01


Q ss_pred             cCCCccEEEEc------cCChHHHHHHHHHhcCCCcEEEEE
Q 018072          262 TNGGVDRSVEC------TGNIDNMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       262 ~~~g~Dvvid~------~g~~~~~~~~~~~l~~~~G~iv~~  296 (361)
                      .++.||+|+..      ..-...+..+.+.|+++ |++++.
T Consensus        97 ~~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPG-G~l~i~  136 (245)
T d1nkva_          97 ANEKCDVAACVGATWIAGGFAGAEELLAQSLKPG-GIMLIG  136 (245)
T ss_dssp             CSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEE-EEEEEE
T ss_pred             ccCceeEEEEEehhhccCCHHHHHHHHHHHcCcC-cEEEEE
Confidence            23479999853      12345778888999997 998775

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.97  E-value=0.0002  Score=60.77  Aligned_cols=99  Identities=17%  Similarity=0.264  Sum_probs=63.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCC----ccHHHHHHHHcCC-CccE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD----RPIQEVIAEMTNG-GVDR  268 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~----~~~~~~i~~~~~~-g~Dv  268 (361)
                      +|.+|||+|+ +++|.+.++.+...|+ +|+.+++++++..     .....+.....+    +.+...+...... ++|+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~-~V~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~   74 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEA-----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA   74 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTS-----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCccccc-----cccceeecccCcHHHHHHHHHHHHHHhCCCCceE
Confidence            4789999998 8999999999999999 8999888765421     111122222211    1122233333333 7999


Q ss_pred             EEEccCCh-----------H---------------HHHHHHHHhcCCCcEEEEEcCCC
Q 018072          269 SVECTGNI-----------D---------------NMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       269 vid~~g~~-----------~---------------~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      +++++|..           +               ....+++.|+++ |+++.++...
T Consensus        75 lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-G~Iv~isS~~  131 (236)
T d1dhra_          75 ILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEG-GLLTLAGAKA  131 (236)
T ss_dssp             EEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCGG
T ss_pred             EEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccc-cceeEEccHH
Confidence            99998731           1               123455677887 9999997544

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.96  E-value=0.0013  Score=57.06  Aligned_cols=104  Identities=16%  Similarity=0.180  Sum_probs=71.0

Q ss_pred             hhhhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHH
Q 018072          184 LGATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIA  259 (361)
Q Consensus       184 ~~a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~  259 (361)
                      +..+.+..++++|++||=+|+|. |.++..+++..|. +|++++.+++..+.+++    .|....+.....+  +     
T Consensus        41 ~~~~~~~l~l~~g~~VLDiGCG~-G~~a~~~a~~~g~-~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~~d--~-----  111 (280)
T d2fk8a1          41 VDLNLDKLDLKPGMTLLDIGCGW-GTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQG--W-----  111 (280)
T ss_dssp             HHHHHTTSCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESC--G-----
T ss_pred             HHHHHHHcCCCCCCEEEEecCCc-hHHHHHHHHhCce-eEEEecchHHHHHHHHHHHHhhccccchhhhhhh--h-----
Confidence            33456788999999999999975 3456778888898 99999999998877754    3543222111111  1     


Q ss_pred             HHcCCCccEEEE-----ccCC---hHHHHHHHHHhcCCCcEEEEEc
Q 018072          260 EMTNGGVDRSVE-----CTGN---IDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       260 ~~~~~g~Dvvid-----~~g~---~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      ...++.||.|+.     .++.   +..+....+.|+|+ |++++-.
T Consensus       112 ~~~~~~fD~i~si~~~eh~~~~~~~~~f~~i~~~Lkpg-G~~~i~~  156 (280)
T d2fk8a1         112 EDFAEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPAD-GRMTVQS  156 (280)
T ss_dssp             GGCCCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTT-CEEEEEE
T ss_pred             hhhccchhhhhHhhHHHHhhhhhHHHHHHHHHhccCCC-ceEEEEE
Confidence            012347888864     3333   24578889999998 9998743

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.96  E-value=0.0017  Score=55.03  Aligned_cols=107  Identities=16%  Similarity=0.156  Sum_probs=70.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-EEcCCCCC-ccHHHHHHHHc--CCC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHD-RPIQEVIAEMT--NGG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-vv~~~~~~-~~~~~~i~~~~--~~g  265 (361)
                      .|.++||+|+ +++|...+..+...|+ +|+.+++++++++.+.    +.|... .+..+-.+ +...+.++...  .+.
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G~-~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~   84 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD   84 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            5789999998 8999998888888899 9999999999877653    355543 22222222 22333443332  237


Q ss_pred             ccEEEEccCChH-------------------------HHHHHHHHhcCC-CcEEEEEcCCCCC
Q 018072          266 VDRSVECTGNID-------------------------NMISAFECVHDG-WGVAVLVGVPSKD  302 (361)
Q Consensus       266 ~Dvvid~~g~~~-------------------------~~~~~~~~l~~~-~G~iv~~g~~~~~  302 (361)
                      .|++++++|...                         ....+++.|... +|+++.++.....
T Consensus        85 idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~  147 (244)
T d1yb1a_          85 VSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGH  147 (244)
T ss_dssp             CSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-C
T ss_pred             CceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhc
Confidence            999999988521                         123455555432 2889999876643

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.94  E-value=0.0019  Score=56.07  Aligned_cols=102  Identities=17%  Similarity=0.121  Sum_probs=71.2

Q ss_pred             hhhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHH
Q 018072          186 ATLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEM  261 (361)
Q Consensus       186 a~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~  261 (361)
                      -+.+++++++|++||=+|+|- |..++.+|+..|+ +|++++.+++..+.+++    .|...-+.....+  +     ..
T Consensus        53 ~~~~~l~l~~G~~VLDiGCG~-G~~a~~~a~~~g~-~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~d--~-----~~  123 (285)
T d1kpga_          53 LALGKLGLQPGMTLLDVGCGW-GATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAG--W-----EQ  123 (285)
T ss_dssp             HHHTTTTCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESC--G-----GG
T ss_pred             HHHHHcCCCCCCEEEEecCcc-hHHHHHHHhcCCc-ceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHhh--h-----hc
Confidence            346788999999999999975 6778888999998 99999999998887754    3332212111111  1     01


Q ss_pred             cCCCccEEEE-----ccCC---hHHHHHHHHHhcCCCcEEEEEc
Q 018072          262 TNGGVDRSVE-----CTGN---IDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       262 ~~~g~Dvvid-----~~g~---~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      .++.+|.|+.     .++.   ...+..+.+.|+++ |++++..
T Consensus       124 ~~~~fD~i~si~~~eh~~~~~~~~~~~~~~r~Lkpg-G~~~l~~  166 (285)
T d1kpga_         124 FDEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPAD-GVMLLHT  166 (285)
T ss_dssp             CCCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTT-CEEEEEE
T ss_pred             ccccccceeeehhhhhcCchhHHHHHHHHHhhcCCC-CcEEEEE
Confidence            2347888775     3433   24577888999998 9988644

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.94  E-value=0.002  Score=55.13  Aligned_cols=79  Identities=23%  Similarity=0.228  Sum_probs=54.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCEE---EcCCCCCccHHHHHH---HHcC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDF---VNTSEHDRPIQEVIA---EMTN  263 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~v---v~~~~~~~~~~~~i~---~~~~  263 (361)
                      +|.++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+.    +.+....   .|..+. .++.+.+.   +..+
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~~~   84 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLR-PEREKLMQTVSSMFG   84 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSH-HHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCH-HHHHHHHHHHHHHhC
Confidence            4889999988 8999999999999999 8999999998876653    2343322   222222 12333333   3333


Q ss_pred             CCccEEEEccCC
Q 018072          264 GGVDRSVECTGN  275 (361)
Q Consensus       264 ~g~Dvvid~~g~  275 (361)
                      +.+|++++++|.
T Consensus        85 g~idilvnnAG~   96 (259)
T d1xq1a_          85 GKLDILINNLGA   96 (259)
T ss_dssp             TCCSEEEEECCC
T ss_pred             CCcccccccccc
Confidence            469999999885

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=96.92  E-value=0.0027  Score=51.09  Aligned_cols=100  Identities=10%  Similarity=-0.015  Sum_probs=66.2

Q ss_pred             hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCE----------EEcC--------CC
Q 018072          188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD----------FVNT--------SE  249 (361)
Q Consensus       188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~----------vv~~--------~~  249 (361)
                      +....+.||.+||.+|+|. |..+..+|+. |. +|+++|.+++-++.+++.....          ....        +-
T Consensus        13 ~~~l~~~~~~rvLd~GCG~-G~~a~~la~~-G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~   89 (201)
T d1pjza_          13 WSSLNVVPGARVLVPLCGK-SQDMSWLSGQ-GY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF   89 (201)
T ss_dssp             HHHHCCCTTCEEEETTTCC-SHHHHHHHHH-CC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC
T ss_pred             HHHcCCCCCCEEEEecCcC-CHHHHHHHHc-CC-ceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccc
Confidence            4556789999999999976 7788888864 88 9999999999999987632110          0000        00


Q ss_pred             CCccHHHHHHHHcCCCccEEEEccC--------ChHHHHHHHHHhcCCCcEEEEEc
Q 018072          250 HDRPIQEVIAEMTNGGVDRSVECTG--------NIDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       250 ~~~~~~~~i~~~~~~g~Dvvid~~g--------~~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      .+  ....    ....+|+|++...        ....+....+.|+++ |++++..
T Consensus        90 ~~--l~~~----~~~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~Lkpg-G~l~l~~  138 (201)
T d1pjza_          90 FA--LTAR----DIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQA-CSGLLIT  138 (201)
T ss_dssp             SS--STHH----HHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSE-EEEEEEE
T ss_pred             cc--cccc----cccceeEEEEEeeeEecchhhhHHHHHHHHHhcCCC-cEEEEEE
Confidence            00  0000    0125899988543        123567888899997 9876543

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.91  E-value=0.00095  Score=57.08  Aligned_cols=80  Identities=19%  Similarity=0.267  Sum_probs=55.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCEE-EcCCCCC-ccHHHHHHHHcC--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF-VNTSEHD-RPIQEVIAEMTN--GG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~v-v~~~~~~-~~~~~~i~~~~~--~g  265 (361)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+    ++.|.... +..+-.+ +++.+.+.....  ++
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~   88 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK   88 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            5789999988 8999999999999999 899999998876654    44565432 2222222 223333333222  37


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++++++|.
T Consensus        89 iDilvnnAG~   98 (255)
T d1fmca_          89 VDILVNNAGG   98 (255)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEeeeCCcC
Confidence            9999999874

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=96.89  E-value=0.0046  Score=49.71  Aligned_cols=41  Identities=22%  Similarity=0.430  Sum_probs=36.1

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHH
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE  235 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~  235 (361)
                      .+.+|+|+|+|+++.+++..+...|.+.++.+.+++++.+.
T Consensus        17 ~~k~vlIlGaGGaarai~~al~~~g~~~i~i~nR~~~~~~~   57 (182)
T d1vi2a1          17 KGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDK   57 (182)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHH
T ss_pred             CCCEEEEECCcHHHHHHHHHHhhcCCceEeeeccchHHHHH
Confidence            67899999999999999999999999899999998776554

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.89  E-value=0.0017  Score=51.09  Aligned_cols=107  Identities=22%  Similarity=0.207  Sum_probs=76.0

Q ss_pred             hhhhhhhcC-CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHc
Q 018072          184 LGATLNVAK-PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMT  262 (361)
Q Consensus       184 ~~a~~~~~~-~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~  262 (361)
                      +.++.+..+ .-.|++|+|+|-|-+|.-.++.++.+|+ +|++++.++-+.-++.--|... ..       +.+.+    
T Consensus        11 ~~~~~r~t~~~l~Gk~v~V~GyG~iG~g~A~~~rg~G~-~V~v~e~dp~~al~A~~dG~~v-~~-------~~~a~----   77 (163)
T d1li4a1          11 IDGIKRATDVMIAGKVAVVAGYGDVGKGCAQALRGFGA-RVIITEIDPINALQAAMEGYEV-TT-------MDEAC----   77 (163)
T ss_dssp             HHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE-CC-------HHHHT----
T ss_pred             HHHHHHHhCceecCCEEEEeccccccHHHHHHHHhCCC-eeEeeecccchhHHhhcCceEe-ee-------hhhhh----
Confidence            334444333 5689999999999999999999999999 9999999997765555445432 11       22221    


Q ss_pred             CCCccEEEEccCChHHH-HHHHHHhcCCCcEEEEEcCCCCCceeec
Q 018072          263 NGGVDRSVECTGNIDNM-ISAFECVHDGWGVAVLVGVPSKDAVFMT  307 (361)
Q Consensus       263 ~~g~Dvvid~~g~~~~~-~~~~~~l~~~~G~iv~~g~~~~~~~~~~  307 (361)
                       ...|+++-++|+...+ ..-++.|+++ ..+..+|...  .++++
T Consensus        78 -~~adivvtaTGn~~vI~~eh~~~MKdg-aIL~N~Ghfd--~EId~  119 (163)
T d1li4a1          78 -QEGNIFVTTTGCIDIILGRHFEQMKDD-AIVCNIGHFD--VEIDV  119 (163)
T ss_dssp             -TTCSEEEECSSCSCSBCHHHHTTCCTT-EEEEECSSST--TSBCH
T ss_pred             -hhccEEEecCCCccchhHHHHHhccCC-eEEEEecccc--ceecH
Confidence             2479999999986544 4778889986 6777777544  44443

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.88  E-value=0.0045  Score=53.12  Aligned_cols=103  Identities=21%  Similarity=0.234  Sum_probs=68.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCh-hhHH----HHHHcCCCEEEcC-CCCC-ccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS-KRFE----EAKKFGVTDFVNT-SEHD-RPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~-~~~~----~~~~~G~~~vv~~-~~~~-~~~~~~i~~~~~--~  264 (361)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.++++. ++++    .+++.|.+..... +-.+ +++.+.+.....  +
T Consensus        17 ~gK~~lITGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g   95 (272)
T d1g0oa_          17 EGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG   95 (272)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhC
Confidence            3789999987 8999999999999999 888887664 4433    3455666543322 2222 234444444332  3


Q ss_pred             CccEEEEccCChH-------------------------HHHHHHHHhcCCCcEEEEEcCC
Q 018072          265 GVDRSVECTGNID-------------------------NMISAFECVHDGWGVAVLVGVP  299 (361)
Q Consensus       265 g~Dvvid~~g~~~-------------------------~~~~~~~~l~~~~G~iv~~g~~  299 (361)
                      ++|+++++.|...                         ....+++.|... |+++.++..
T Consensus        96 ~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~-g~~i~i~s~  154 (272)
T d1g0oa_          96 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG-GRLILMGSI  154 (272)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT-CEEEEECCG
T ss_pred             CCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccc-ccccccccc
Confidence            7899999887421                         235667778887 888888643

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.85  E-value=0.0033  Score=52.79  Aligned_cols=72  Identities=21%  Similarity=0.261  Sum_probs=51.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEE-cCCCCCccHHHHHHHHcCCCccEEEEc
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFV-NTSEHDRPIQEVIAEMTNGGVDRSVEC  272 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv-~~~~~~~~~~~~i~~~~~~g~Dvvid~  272 (361)
                      +|.++||+|+ +++|.+.++.+...|+ +|+.+++++++++   +.+...+. |..+   ++...+.++  +.+|+++++
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga-~V~~~~r~~~~l~---~~~~~~~~~Dv~~---~~~~~~~~~--g~iD~lVnn   73 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEELLK---RSGHRYVVCDLRK---DLDLLFEKV--KEVDILVLN   73 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHH---HTCSEEEECCTTT---CHHHHHHHS--CCCSEEEEC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHH---hcCCcEEEcchHH---HHHHHHHHh--CCCcEEEec
Confidence            4789999987 8999999999999999 8999999887654   44544332 2221   243333333  479999999


Q ss_pred             cCC
Q 018072          273 TGN  275 (361)
Q Consensus       273 ~g~  275 (361)
                      +|.
T Consensus        74 AG~   76 (234)
T d1o5ia_          74 AGG   76 (234)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            874

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=96.85  E-value=0.0022  Score=54.19  Aligned_cols=103  Identities=25%  Similarity=0.374  Sum_probs=70.0

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCCEEE---cCCCCCccHHHHHHHHcC--CCcc
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDFV---NTSEHDRPIQEVIAEMTN--GGVD  267 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~~~vv---~~~~~~~~~~~~i~~~~~--~g~D  267 (361)
                      .|.++||+|+ +++|.+.++-+...|+ +|+.+++++++++.+. +++.+...   |..+. +++.+.+.....  +++|
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~-~~i~~~~~~i~~~~g~iD   81 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADVSDP-KAVEAVFAEALEEFGRLH   81 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTTSH-HHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCceEEEEecCCCH-HHHHHHHHHHHHHhCCcc
Confidence            5889999988 8999999999999999 9999999998876654 47765422   22221 224343443332  3799


Q ss_pred             EEEEccCChH-------------------------HHHHHHHHhcCCCcEEEEEcCCC
Q 018072          268 RSVECTGNID-------------------------NMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       268 vvid~~g~~~-------------------------~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      +.++++|...                         .....+..+... +.++.++...
T Consensus        82 iLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~-~~i~~~ss~a  138 (241)
T d2a4ka1          82 GVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG-GSLVLTGSVA  138 (241)
T ss_dssp             EEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT-CEEEEECCCT
T ss_pred             Eeccccccccccchhhhhccccccccccccccccccccccccccccc-cceeeccccc
Confidence            9999887421                         123445667776 7777776554

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.85  E-value=0.0013  Score=56.16  Aligned_cols=79  Identities=24%  Similarity=0.393  Sum_probs=54.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCC-EE--E--cCCCCCccHHHHHHHHcC-
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVT-DF--V--NTSEHDRPIQEVIAEMTN-  263 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~-~v--v--~~~~~~~~~~~~i~~~~~-  263 (361)
                      +|.++||+|+ +++|.+.+..+...|+ +|+.+++++++++.+.    +.+.. .+  +  |..+. +++.+.+..... 
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~-~~v~~~v~~~~~~   86 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNE-EDILSMFSAIRSQ   86 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCH-HHHHHHHHHHHHh
Confidence            4789999988 8999999999999999 8999999998877653    33432 22  2  23222 223333333332 


Q ss_pred             -CCccEEEEccCC
Q 018072          264 -GGVDRSVECTGN  275 (361)
Q Consensus       264 -~g~Dvvid~~g~  275 (361)
                       +++|++|+++|.
T Consensus        87 ~g~iD~lVnnAg~   99 (257)
T d1xg5a_          87 HSGVDICINNAGL   99 (257)
T ss_dssp             HCCCSEEEECCCC
T ss_pred             cCCCCEEEecccc
Confidence             379999999875

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=96.83  E-value=0.002  Score=55.03  Aligned_cols=78  Identities=22%  Similarity=0.324  Sum_probs=54.1

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCEE---EcCCCCCccHHHHHHHHcC--CC
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF---VNTSEHDRPIQEVIAEMTN--GG  265 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~v---v~~~~~~~~~~~~i~~~~~--~g  265 (361)
                      |+.+||+|+ +++|.+.++.+...|+ +|+.+++++++++.+    ++.|....   .|..+. +++.+.+....+  ++
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~-~~v~~~~~~~~~~~g~   79 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSV-PEIEALVAAVVERYGP   79 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHTCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCH-HHHHHHHHHHHHHhCC
Confidence            567789987 8999999999999999 899999998876654    34565432   222222 224444433322  37


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|++++++|.
T Consensus        80 iDilVnnAG~   89 (257)
T d2rhca1          80 VDVLVNNAGR   89 (257)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEecccc
Confidence            9999999874

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=96.83  E-value=0.0023  Score=48.58  Aligned_cols=75  Identities=13%  Similarity=0.244  Sum_probs=55.9

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChH
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  277 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~  277 (361)
                      +++|+|.|.+|...++.+...|. .|++++.++++.+.+++.|...++- +..+.+   .+.+..-..+|.++-++++..
T Consensus         2 ~~iIiG~G~~G~~la~~L~~~g~-~vvvid~d~~~~~~~~~~~~~~~~g-d~~~~~---~l~~a~i~~a~~vi~~~~~~~   76 (134)
T d2hmva1           2 QFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASYATHAVIA-NATEEN---ELLSLGIRNFEYVIVAIGANI   76 (134)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHHTTTTCSEEEEC-CTTCTT---HHHHHTGGGCSEEEECCCSCH
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-eEEEecCcHHHHHHHHHhCCcceee-ecccch---hhhccCCccccEEEEEcCchH
Confidence            57888999999999999999999 8999999999999998888755443 222222   233332126788888887643

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=96.82  E-value=0.002  Score=54.87  Aligned_cols=80  Identities=25%  Similarity=0.294  Sum_probs=54.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCC--C-EEEcCCCCC-ccHHHHHHHHcC--CCc
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGV--T-DFVNTSEHD-RPIQEVIAEMTN--GGV  266 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~--~-~vv~~~~~~-~~~~~~i~~~~~--~g~  266 (361)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+.+ ++.  . ..+..+-.+ .++.+.+.....  +++
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   83 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV   83 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCc
Confidence            4788999987 8999999999999999 89999999988877643 332  2 222222222 223333333222  379


Q ss_pred             cEEEEccCC
Q 018072          267 DRSVECTGN  275 (361)
Q Consensus       267 Dvvid~~g~  275 (361)
                      |++++++|.
T Consensus        84 DiLVnnAg~   92 (251)
T d1zk4a1          84 STLVNNAGI   92 (251)
T ss_dssp             CEEEECCCC
T ss_pred             eEEEecccc
Confidence            999999874

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=96.80  E-value=0.0018  Score=55.39  Aligned_cols=78  Identities=23%  Similarity=0.298  Sum_probs=53.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----c--CCCEE-E--cCCCCCccHHHHHHHHcC-
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----F--GVTDF-V--NTSEHDRPIQEVIAEMTN-  263 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~--G~~~v-v--~~~~~~~~~~~~i~~~~~-  263 (361)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+.+    .  +.... +  |..+. +++.+.+..... 
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~-~~v~~~~~~~~~~   80 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDE-AQVEAYVTATTER   80 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCH-HHHHHHHHHHHHH
Confidence            4788999988 8999999999999999 89999999988765532    2  22222 2  33332 223333333322 


Q ss_pred             -CCccEEEEccC
Q 018072          264 -GGVDRSVECTG  274 (361)
Q Consensus       264 -~g~Dvvid~~g  274 (361)
                       +++|++++++|
T Consensus        81 ~G~iDiLVnnAG   92 (258)
T d1iy8a_          81 FGRIDGFFNNAG   92 (258)
T ss_dssp             HSCCSEEEECCC
T ss_pred             hCCCCEEEECCc
Confidence             37999999987

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.80  E-value=0.0023  Score=55.16  Aligned_cols=102  Identities=23%  Similarity=0.250  Sum_probs=63.3

Q ss_pred             CCCEE-EEEcC-CHHHHHHHH-HHHHcCCCeEEEEcCChhhHHHHH----HcCCCE-EEcCCCCC-ccHHHHHHHHcC--
Q 018072          195 RGSSV-AVFGL-GAVGLAAAE-GARIAGASRIIGVDRSSKRFEEAK----KFGVTD-FVNTSEHD-RPIQEVIAEMTN--  263 (361)
Q Consensus       195 ~g~~V-lI~G~-g~vG~~a~~-~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~-vv~~~~~~-~~~~~~i~~~~~--  263 (361)
                      .|.+| ||+|+ +++|++.++ +++..|+ +|+.+++++++++.+.    +.|... .+.-+-.+ ..+.+.+.....  
T Consensus         1 ~g~rVAlVTGas~GIG~a~A~~la~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~   79 (275)
T d1wmaa1           1 SGIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY   79 (275)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCeEEEECCCCCHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhc
Confidence            36778 55687 899998776 5555577 9999999998876653    334432 22222222 123322232222  


Q ss_pred             CCccEEEEccCCh----------H---------------HHHHHHHHhcCCCcEEEEEcC
Q 018072          264 GGVDRSVECTGNI----------D---------------NMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       264 ~g~Dvvid~~g~~----------~---------------~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      +++|++|+++|-.          +               ....++..|++. |+++.++.
T Consensus        80 g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-g~ivnisS  138 (275)
T d1wmaa1          80 GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQ-GRVVNVSS  138 (275)
T ss_dssp             SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEE-EEEEEECC
T ss_pred             CCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcccccc
Confidence            3799999998841          0               123445567787 99999875

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.80  E-value=0.00085  Score=55.16  Aligned_cols=97  Identities=18%  Similarity=0.161  Sum_probs=62.9

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      .++|+|+|+ |.+|...+..+...|. +|+++.++++++......+++. +.-+-.+  .. .+.+.. .+.|+||.++|
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~-~~gD~~d--~~-~l~~al-~~~d~vi~~~g   76 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGPRPAHV-VVGDVLQ--AA-DVDKTV-AGQDAVIVLLG   76 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSCCCSEE-EESCTTS--HH-HHHHHH-TTCSEEEECCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEEcChhhccccccccccc-ccccccc--hh-hHHHHh-cCCCEEEEEec
Confidence            468999998 9999999998888898 8999999998876544445443 3323233  22 233322 25899999987


Q ss_pred             ChH----------HHHHHHHHhcCCC-cEEEEEcC
Q 018072          275 NID----------NMISAFECVHDGW-GVAVLVGV  298 (361)
Q Consensus       275 ~~~----------~~~~~~~~l~~~~-G~iv~~g~  298 (361)
                      ...          .....++.++..+ .+++.++.
T Consensus        77 ~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss  111 (205)
T d1hdoa_          77 TRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS  111 (205)
T ss_dssp             CTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             cCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEee
Confidence            521          1223444455431 37777753

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.79  E-value=0.00048  Score=61.09  Aligned_cols=104  Identities=17%  Similarity=0.223  Sum_probs=68.9

Q ss_pred             hhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHH----cC-----------CCE--EEcCC
Q 018072          187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FG-----------VTD--FVNTS  248 (361)
Q Consensus       187 ~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~----~G-----------~~~--vv~~~  248 (361)
                      +....+++||++||=.|+|. |.+++.+|++.|. .+|++++.+++.++.+++    ++           .+.  ++..+
T Consensus        90 Il~~l~i~pG~rVLE~GtGs-G~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~d  168 (324)
T d2b25a1          90 ILSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKD  168 (324)
T ss_dssp             HHHHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESC
T ss_pred             HHHHhCCCCCCEEEEecccc-cHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEEecc
Confidence            35678999999999999876 8889999998874 489999999998888764    11           111  11111


Q ss_pred             CCCccHHHHHHHHcCCCccEEEEccCCh-HHHHHHHHHhcCCCcEEEEEc
Q 018072          249 EHDRPIQEVIAEMTNGGVDRSVECTGNI-DNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       249 ~~~~~~~~~i~~~~~~g~Dvvid~~g~~-~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      -.+  +   ...+....+|.||--...| ..++.+.+.|+++ |+++.+-
T Consensus       169 i~~--~---~~~~~~~~fD~V~LD~p~P~~~l~~~~~~LKpG-G~lv~~~  212 (324)
T d2b25a1         169 ISG--A---TEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHG-GVCAVYV  212 (324)
T ss_dssp             TTC--C---C-------EEEEEECSSSTTTTHHHHGGGEEEE-EEEEEEE
T ss_pred             hhh--c---ccccCCCCcceEeecCcCHHHHHHHHHHhccCC-CEEEEEe
Confidence            111  1   1112223688777444433 4788999999997 9998764

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.79  E-value=0.0017  Score=55.44  Aligned_cols=103  Identities=18%  Similarity=0.321  Sum_probs=67.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-c----C-CCE-E--EcCCCCCccHHHHHHHHcC-
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F----G-VTD-F--VNTSEHDRPIQEVIAEMTN-  263 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~----G-~~~-v--v~~~~~~~~~~~~i~~~~~-  263 (361)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+.+ +    + ... .  .|..+. .++.+.+..... 
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~~   79 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQ-QQLRDTFRKVVDH   79 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSH-HHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCH-HHHHHHHHHHHHH
Confidence            4789999988 8999999999999999 89999999988766533 2    1 122 1  233222 223344433322 


Q ss_pred             -CCccEEEEccCChH-----------------HHHHHHHHhcC-----CCcEEEEEcCCC
Q 018072          264 -GGVDRSVECTGNID-----------------NMISAFECVHD-----GWGVAVLVGVPS  300 (361)
Q Consensus       264 -~g~Dvvid~~g~~~-----------------~~~~~~~~l~~-----~~G~iv~~g~~~  300 (361)
                       +++|++++++|...                 ....+++.|.+     + |+++.++...
T Consensus        80 ~G~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~-g~Iv~isS~~  138 (254)
T d2gdza1          80 FGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEG-GIIINMSSLA  138 (254)
T ss_dssp             HSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCC-EEEEEECCGG
T ss_pred             cCCcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCC-cEEEeeccHh
Confidence             37999999988521                 12345555543     3 7899887543

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.76  E-value=0.0025  Score=54.96  Aligned_cols=78  Identities=31%  Similarity=0.404  Sum_probs=53.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCC--E--EE--cCCCCCccHHHHHHHHcC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVT--D--FV--NTSEHDRPIQEVIAEMTN  263 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~--~--vv--~~~~~~~~~~~~i~~~~~  263 (361)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+.    +.|..  .  .+  |..+. .++.+.+.....
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~~~   80 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEA-SGQDDIINTTLA   80 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSH-HHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCH-HHHHHHHHHHHH
Confidence            4789999988 8999999999999999 8999999998876653    34432  1  22  22222 223333333322


Q ss_pred             --CCccEEEEccC
Q 018072          264 --GGVDRSVECTG  274 (361)
Q Consensus       264 --~g~Dvvid~~g  274 (361)
                        +.+|++++++|
T Consensus        81 ~~G~iDilVnnAG   93 (274)
T d1xhla_          81 KFGKIDILVNNAG   93 (274)
T ss_dssp             HHSCCCEEEECCC
T ss_pred             HcCCceEEEeecc
Confidence              37899999987

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.76  E-value=0.00099  Score=56.69  Aligned_cols=80  Identities=18%  Similarity=0.233  Sum_probs=54.0

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHHcCCC--EEEcCCCCC-cc---HHHHHHHHcCC-Cc
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKFGVT--DFVNTSEHD-RP---IQEVIAEMTNG-GV  266 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~~G~~--~vv~~~~~~-~~---~~~~i~~~~~~-g~  266 (361)
                      ..+|||+|+ +++|.+.++.+...|+ .+|+.+.+++++++.+++....  +++..+-.+ +.   +.+.+.+..+. +.
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~i   82 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL   82 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCe
Confidence            378999998 8999998887777786 3789999999998888775332  223222222 12   23333333333 68


Q ss_pred             cEEEEccCC
Q 018072          267 DRSVECTGN  275 (361)
Q Consensus       267 Dvvid~~g~  275 (361)
                      |++++++|.
T Consensus        83 dilinnAG~   91 (250)
T d1yo6a1          83 SLLINNAGV   91 (250)
T ss_dssp             CEEEECCCC
T ss_pred             EEEEEcCcc
Confidence            999999883

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.73  E-value=0.0023  Score=51.71  Aligned_cols=101  Identities=20%  Similarity=0.272  Sum_probs=66.5

Q ss_pred             hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcC
Q 018072          188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTN  263 (361)
Q Consensus       188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~  263 (361)
                      ....++++|++||=+|+|. |..++.+|+. +. +|+++|.+++.++.+++    +|...-+.....+  ..+.   +..
T Consensus        26 l~~l~~~~g~~VLDiGcGs-G~~s~~lA~~-~~-~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gd--a~~~---~~~   97 (186)
T d1l3ia_          26 MCLAEPGKNDVAVDVGCGT-GGVTLELAGR-VR-RVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGD--APEA---LCK   97 (186)
T ss_dssp             HHHHCCCTTCEEEEESCTT-SHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESC--HHHH---HTT
T ss_pred             HHhcCCCCCCEEEEEECCe-Eccccccccc-ce-EEEEecCCHHHHHHHHHHHHHcCCCcceEEEECc--hhhc---ccc
Confidence            4557889999999998854 4555566654 34 89999999998888754    5653111111222  2222   222


Q ss_pred             -CCccEEEEccCC---hHHHHHHHHHhcCCCcEEEEEc
Q 018072          264 -GGVDRSVECTGN---IDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       264 -~g~Dvvid~~g~---~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                       ..+|.|+..-..   .+.++.+.+.|+++ |+++...
T Consensus        98 ~~~~D~v~~~~~~~~~~~~~~~~~~~Lkpg-G~lvi~~  134 (186)
T d1l3ia_          98 IPDIDIAVVGGSGGELQEILRIIKDKLKPG-GRIIVTA  134 (186)
T ss_dssp             SCCEEEEEESCCTTCHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             cCCcCEEEEeCccccchHHHHHHHHHhCcC-CEEEEEe
Confidence             379999876443   34577888899997 9987764

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.72  E-value=0.0072  Score=47.71  Aligned_cols=91  Identities=15%  Similarity=0.160  Sum_probs=61.3

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHHcCCC-EEEcCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  275 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~~G~~-~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~  275 (361)
                      +|+|+|+|.+|...+..++..|. .+|+++|++++.++.+++.+.. ........          ......|+|+-++..
T Consensus         3 ~I~IIG~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~----------~~~~~~dlIila~p~   72 (171)
T d2g5ca2           3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAK----------VEDFSPDFVMLSSPV   72 (171)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGG----------GGGTCCSEEEECSCH
T ss_pred             EEEEEccCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhh----------hhccccccccccCCc
Confidence            69999999999999988888885 4899999999999999998863 33322111          111246788877765


Q ss_pred             hHH---HHHHHHHhcCCCcEEEEEcCC
Q 018072          276 IDN---MISAFECVHDGWGVAVLVGVP  299 (361)
Q Consensus       276 ~~~---~~~~~~~l~~~~G~iv~~g~~  299 (361)
                      ...   ++...+.+.++ ..++.++..
T Consensus        73 ~~~~~vl~~l~~~~~~~-~ii~d~~s~   98 (171)
T d2g5ca2          73 RTFREIAKKLSYILSED-ATVTDQGSV   98 (171)
T ss_dssp             HHHHHHHHHHHHHSCTT-CEEEECCSC
T ss_pred             hhhhhhhhhhhcccccc-ccccccccc
Confidence            332   23344455554 566666543

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.72  E-value=0.0027  Score=55.47  Aligned_cols=82  Identities=15%  Similarity=0.239  Sum_probs=55.0

Q ss_pred             CCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-c--------CCCEE-EcCCCCC-ccHHHHHHH
Q 018072          193 PERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-F--------GVTDF-VNTSEHD-RPIQEVIAE  260 (361)
Q Consensus       193 ~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~--------G~~~v-v~~~~~~-~~~~~~i~~  260 (361)
                      .=.|.++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+.+ +        +.... +..+-.+ +++.+.+..
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga-~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~   87 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   87 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHH
Confidence            346899999988 8999999999999999 89999999988765432 2        22222 2222222 223333433


Q ss_pred             HcC--CCccEEEEccCC
Q 018072          261 MTN--GGVDRSVECTGN  275 (361)
Q Consensus       261 ~~~--~g~Dvvid~~g~  275 (361)
                      ...  +++|++++++|.
T Consensus        88 ~~~~~G~iDiLVnnAg~  104 (297)
T d1yxma1          88 TLDTFGKINFLVNNGGG  104 (297)
T ss_dssp             HHHHHSCCCEEEECCCC
T ss_pred             HHHHhCCeEEEEeeccc
Confidence            322  379999999874

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.69  E-value=0.00033  Score=59.25  Aligned_cols=97  Identities=23%  Similarity=0.294  Sum_probs=61.3

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCC-----ccHHHHHHHH-cCCCccE
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHD-----RPIQEVIAEM-TNGGVDR  268 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~-----~~~~~~i~~~-~~~g~Dv  268 (361)
                      +.+|||+|+ +++|.+.++.+...|+ +|+.++++++...      ........+.+     ....+.+... ..+.+|+
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~-~V~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~   74 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQA------DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDG   74 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTS------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCchhcc------cccceeccccCchhHHHHHHHHHHHHhcCCCeeE
Confidence            357999988 8999999999999999 8999999876421      11122111111     0111222222 2347999


Q ss_pred             EEEccCCh-----------H---------------HHHHHHHHhcCCCcEEEEEcCCC
Q 018072          269 SVECTGNI-----------D---------------NMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       269 vid~~g~~-----------~---------------~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      +++++|..           +               ....++..|+++ |+++.++...
T Consensus        75 linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-g~Iv~isS~~  131 (235)
T d1ooea_          75 VFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPG-GLLQLTGAAA  131 (235)
T ss_dssp             EEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE-EEEEEECCGG
T ss_pred             EEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccc-eEEEEeccHH
Confidence            99998730           0               123556677887 9999997543

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.69  E-value=0.0015  Score=56.28  Aligned_cols=79  Identities=24%  Similarity=0.353  Sum_probs=54.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCC--E----EEcCCCCCccHHHHHHHHcC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT--D----FVNTSEHDRPIQEVIAEMTN  263 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~--~----vv~~~~~~~~~~~~i~~~~~  263 (361)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+.+    .+..  .    ..|..+. .++.+.+.....
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~-~~v~~~~~~~~~   81 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTE-DGQDQIINSTLK   81 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSH-HHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCH-HHHHHHHHHHHH
Confidence            4788999987 8999999999999999 99999999988776543    3321  1    2222222 223333433322


Q ss_pred             --CCccEEEEccCC
Q 018072          264 --GGVDRSVECTGN  275 (361)
Q Consensus       264 --~g~Dvvid~~g~  275 (361)
                        +++|++++++|.
T Consensus        82 ~~g~iDilvnnAG~   95 (272)
T d1xkqa_          82 QFGKIDVLVNNAGA   95 (272)
T ss_dssp             HHSCCCEEEECCCC
T ss_pred             HhCCceEEEeCCcc
Confidence              379999999774

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.69  E-value=0.0024  Score=54.89  Aligned_cols=81  Identities=20%  Similarity=0.252  Sum_probs=53.5

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-----cCCCE-EEcCCCCCccHHHH-HHHHc--C
Q 018072          194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----FGVTD-FVNTSEHDRPIQEV-IAEMT--N  263 (361)
Q Consensus       194 ~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-----~G~~~-vv~~~~~~~~~~~~-i~~~~--~  263 (361)
                      =.|.++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+.+     .+... .+.....+....+. .....  .
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~-~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   90 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM   90 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHh
Confidence            35889999998 8999999999989999 99999999998877643     23322 22222222112222 22221  2


Q ss_pred             CCccEEEEccCC
Q 018072          264 GGVDRSVECTGN  275 (361)
Q Consensus       264 ~g~Dvvid~~g~  275 (361)
                      +..|+++++.|.
T Consensus        91 g~~~~li~nag~  102 (269)
T d1xu9a_          91 GGLDMLILNHIT  102 (269)
T ss_dssp             TSCSEEEECCCC
T ss_pred             CCcccccccccc
Confidence            368999987764

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.68  E-value=0.0019  Score=55.38  Aligned_cols=79  Identities=23%  Similarity=0.325  Sum_probs=53.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCC----EEE--cCCCCCccHHHHHHHHcC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVT----DFV--NTSEHDRPIQEVIAEMTN  263 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~----~vv--~~~~~~~~~~~~i~~~~~  263 (361)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+.    +.|..    ..+  |..+. .++.+.+.....
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~-~~v~~~~~~~~~   81 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTD-AGQDEILSTTLG   81 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSH-HHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCH-HHHHHHHHHHHH
Confidence            5788899987 8999999999999999 8999999998876653    23322    122  22222 223333433322


Q ss_pred             --CCccEEEEccCC
Q 018072          264 --GGVDRSVECTGN  275 (361)
Q Consensus       264 --~g~Dvvid~~g~  275 (361)
                        +++|++++++|.
T Consensus        82 ~~g~iDilvnnAG~   95 (264)
T d1spxa_          82 KFGKLDILVNNAGA   95 (264)
T ss_dssp             HHSCCCEEEECCC-
T ss_pred             HhCCCCEeeccccc
Confidence              379999999873

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=96.67  E-value=0.0019  Score=55.32  Aligned_cols=80  Identities=19%  Similarity=0.229  Sum_probs=52.5

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChh-hHH----HHHHcCCCEEE-cCCCCC-ccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK-RFE----EAKKFGVTDFV-NTSEHD-RPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~-~~~----~~~~~G~~~vv-~~~~~~-~~~~~~i~~~~~--~  264 (361)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.++++.+ +.+    .+++.|.+... ..+-.+ .++.+.+.....  +
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   84 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG   84 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            4788999987 8999999998889999 8999888754 333    34556664322 222222 223333333222  3


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      ++|++++++|.
T Consensus        85 ~iDiLVnnAG~   95 (261)
T d1geea_          85 KLDVMINNAGL   95 (261)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEeecccee
Confidence            79999999874

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=96.67  E-value=0.0017  Score=55.52  Aligned_cols=80  Identities=23%  Similarity=0.317  Sum_probs=54.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-----HHcCCCEE-EcCCCCC-ccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-----KKFGVTDF-VNTSEHD-RPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~-----~~~G~~~v-v~~~~~~-~~~~~~i~~~~~--~  264 (361)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+     +++|.... +.-+-.+ +++.+.+.....  +
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   86 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLG   86 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            4789999988 8999999999999999 899999998765443     34565432 2222222 223334433322  3


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      ++|++++++|.
T Consensus        87 ~iDilVnnAg~   97 (260)
T d1h5qa_          87 PISGLIANAGV   97 (260)
T ss_dssp             SEEEEEECCCC
T ss_pred             CCcEecccccc
Confidence            79999999873

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=96.66  E-value=0.0032  Score=53.36  Aligned_cols=79  Identities=19%  Similarity=0.218  Sum_probs=53.9

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhh--HHHHHHcCCCEEE---cCCCCCccHHHHHHHHcC--CCc
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR--FEEAKKFGVTDFV---NTSEHDRPIQEVIAEMTN--GGV  266 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~--~~~~~~~G~~~vv---~~~~~~~~~~~~i~~~~~--~g~  266 (361)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++  .+.++++|.....   |..+. .++.+.+.+...  +++
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~-~~v~~~~~~~~~~~G~i   81 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQP-GDVEAFGKQVISTFGRC   81 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCH-HHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCH-HHHHHHHHHHHHHcCCC
Confidence            4788999988 8999999999999999 89999887643  3445667765422   22222 223333333322  379


Q ss_pred             cEEEEccCC
Q 018072          267 DRSVECTGN  275 (361)
Q Consensus       267 Dvvid~~g~  275 (361)
                      |++++++|.
T Consensus        82 DilVnnAG~   90 (247)
T d2ew8a1          82 DILVNNAGI   90 (247)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999874

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.66  E-value=0.0065  Score=47.70  Aligned_cols=89  Identities=18%  Similarity=0.237  Sum_probs=63.1

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChH
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  277 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~  277 (361)
                      +|-|+|.|.+|...+.-+...|. .|++.++++++.+.+.+.++...   .  +  ..+.++     ..|+||-|+.+++
T Consensus         2 kIgiIGlG~MG~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~~~~~---~--~--~~e~~~-----~~d~ii~~v~~~~   68 (161)
T d1vpda2           2 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAETA---S--T--AKAIAE-----QCDVIITMLPNSP   68 (161)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC---S--S--HHHHHH-----HCSEEEECCSSHH
T ss_pred             EEEEEehhHHHHHHHHHHHHCCC-eEEEEeCCcchhHHHHHhhhhhc---c--c--HHHHHh-----CCCeEEEEcCCHH
Confidence            58899999999998888888898 89999999999999988876431   1  1  232322     3688888887766


Q ss_pred             HHHHH-------HHHhcCCCcEEEEEcCCC
Q 018072          278 NMISA-------FECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       278 ~~~~~-------~~~l~~~~G~iv~~g~~~  300 (361)
                      ..+..       ...++++ ..++.++...
T Consensus        69 ~v~~v~~~~~~~~~~~~~g-~iiid~sT~~   97 (161)
T d1vpda2          69 HVKEVALGENGIIEGAKPG-TVLIDMSSIA   97 (161)
T ss_dssp             HHHHHHHSTTCHHHHCCTT-CEEEECSCCC
T ss_pred             HHHHHHhCCcchhhccCCC-CEEEECCCCC
Confidence            65543       3344554 5566665443

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.64  E-value=0.0022  Score=54.50  Aligned_cols=80  Identities=21%  Similarity=0.252  Sum_probs=54.2

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCEE-EcCCCCC-ccHHHHHHHHcC--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDF-VNTSEHD-RPIQEVIAEMTN--GG  265 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~v-v~~~~~~-~~~~~~i~~~~~--~g  265 (361)
                      .+..+||+|+ +++|.+.++.+...|+ +|+.+++++++++.+.    +.|.... +..+-.+ +++.+.+.....  ++
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~   87 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKN   87 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            3678889988 8999999998888898 8999999998876543    3555432 2222222 223334433322  37


Q ss_pred             ccEEEEccCC
Q 018072          266 VDRSVECTGN  275 (361)
Q Consensus       266 ~Dvvid~~g~  275 (361)
                      +|+++++.|.
T Consensus        88 iDilvnnag~   97 (251)
T d2c07a1          88 VDILVNNAGI   97 (251)
T ss_dssp             CCEEEECCCC
T ss_pred             ceeeeecccc
Confidence            9999998874

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=96.63  E-value=0.0013  Score=56.19  Aligned_cols=104  Identities=10%  Similarity=0.123  Sum_probs=61.8

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEE--EcCCCC-C-ccHHHHHHHHcC--
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDF--VNTSEH-D-RPIQEVIAEMTN--  263 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~v--v~~~~~-~-~~~~~~i~~~~~--  263 (361)
                      .|++|||+|+ +++|.+.+..+...|+ +|+.+.++.++.+.+.+    .+-..+  +..+.. + ..+.+.+.....  
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~-~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   82 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNL-KNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCC-SEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHc
Confidence            4889999987 8999999998889999 66666555544443322    222221  222221 2 223333333332  


Q ss_pred             CCccEEEEccCChH-----------------HHHHHHHHhc-----CCCcEEEEEcCCC
Q 018072          264 GGVDRSVECTGNID-----------------NMISAFECVH-----DGWGVAVLVGVPS  300 (361)
Q Consensus       264 ~g~Dvvid~~g~~~-----------------~~~~~~~~l~-----~~~G~iv~~g~~~  300 (361)
                      +++|++++++|..+                 ....+++.|.     .. |+++.++...
T Consensus        83 g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~-g~Ii~isS~~  140 (254)
T d1sbya1          83 KTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPG-GIIANICSVT  140 (254)
T ss_dssp             SCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCC-EEEEEECCGG
T ss_pred             CCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCC-ceEEEEechh
Confidence            37999999998522                 1234445553     24 8888886544

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=96.62  E-value=0.004  Score=54.05  Aligned_cols=80  Identities=14%  Similarity=0.190  Sum_probs=54.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-----HHcCCCE-EEcCCCCC-ccHHHHHHHHc--CC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-----KKFGVTD-FVNTSEHD-RPIQEVIAEMT--NG  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~-----~~~G~~~-vv~~~~~~-~~~~~~i~~~~--~~  264 (361)
                      .|.++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+     .+.|... .+..+-.+ +++.+.+....  .+
T Consensus        24 ~gK~alITGas~GIG~aiA~~la~~Ga-~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g  102 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG  102 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhcc
Confidence            5789999987 9999999999999999 999999998876543     2345543 33222222 22333333222  23


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      ++|++++++|.
T Consensus       103 ~iDilvnnAg~  113 (294)
T d1w6ua_         103 HPNIVINNAAG  113 (294)
T ss_dssp             SCSEEEECCCC
T ss_pred             ccchhhhhhhh
Confidence            79999999874

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.59  E-value=0.0048  Score=52.35  Aligned_cols=80  Identities=21%  Similarity=0.320  Sum_probs=53.2

Q ss_pred             CCCEEEEEcC-C--HHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----HcCCCEEEcCCCCC-ccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHD-RPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g--~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~----~~G~~~vv~~~~~~-~~~~~~i~~~~~--~  264 (361)
                      .|+++||+|+ |  ++|.+.++.+...|+ +|+.++++++..+.++    ..+....+..+-.+ .++.+.+.....  +
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFG   85 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcC
Confidence            5789999997 5  799999998889999 8988888876555443    23444444433333 223333333222  3


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      ++|++++++|.
T Consensus        86 ~iDilVnnag~   96 (256)
T d1ulua_          86 GLDYLVHAIAF   96 (256)
T ss_dssp             SEEEEEECCCC
T ss_pred             CceEEEecccc
Confidence            79999998864

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=96.59  E-value=0.0057  Score=51.88  Aligned_cols=85  Identities=20%  Similarity=0.244  Sum_probs=55.1

Q ss_pred             cCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChh-------hHHHHHHcCCCEEE-cCCCCC-ccHHHHHHH
Q 018072          191 AKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK-------RFEEAKKFGVTDFV-NTSEHD-RPIQEVIAE  260 (361)
Q Consensus       191 ~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~-------~~~~~~~~G~~~vv-~~~~~~-~~~~~~i~~  260 (361)
                      -.++|+.++||+|+ +++|++.+..+...|+.+|+.+.+++.       ..+.+++.|....+ ..+-.+ .++.+.+..
T Consensus         4 ~~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~   83 (259)
T d2fr1a1           4 DEWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGG   83 (259)
T ss_dssp             CCCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred             cccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcc
Confidence            35789999999987 999999999888889866777766532       22334556765432 222222 223333333


Q ss_pred             HcCC-CccEEEEccCC
Q 018072          261 MTNG-GVDRSVECTGN  275 (361)
Q Consensus       261 ~~~~-g~Dvvid~~g~  275 (361)
                      +... ..|.++++.|.
T Consensus        84 i~~~~~i~~vv~~ag~   99 (259)
T d2fr1a1          84 IGDDVPLSAVFHAAAT   99 (259)
T ss_dssp             SCTTSCEEEEEECCCC
T ss_pred             cccccccccccccccc
Confidence            3333 68999998874

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.57  E-value=0.011  Score=45.79  Aligned_cols=82  Identities=24%  Similarity=0.263  Sum_probs=56.8

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  276 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~  276 (361)
                      +|.++|+|.+|.+.++-+...|..+|+++++++++++.+.+ +|... .+..+.-            ...|+||-++- |
T Consensus         2 kI~fIG~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~-~~~~~~v------------~~~Div~lavk-P   67 (152)
T d1yqga2           2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVET-SATLPEL------------HSDDVLILAVK-P   67 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEE-ESSCCCC------------CTTSEEEECSC-H
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhccccc-ccccccc------------cccceEEEecC-H
Confidence            68899999999987774444454499999999999888765 66543 2221110            14689998886 4


Q ss_pred             HHHHHHHHHhcCCCcEEE
Q 018072          277 DNMISAFECVHDGWGVAV  294 (361)
Q Consensus       277 ~~~~~~~~~l~~~~G~iv  294 (361)
                      +.+...++.+++. +.++
T Consensus        68 ~~~~~v~~~l~~~-~~~v   84 (152)
T d1yqga2          68 QDMEAACKNIRTN-GALV   84 (152)
T ss_dssp             HHHHHHHTTCCCT-TCEE
T ss_pred             HHHHHhHHHHhhc-ccEE
Confidence            6677777777765 5544

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=96.57  E-value=0.0022  Score=53.64  Aligned_cols=99  Identities=19%  Similarity=0.188  Sum_probs=67.9

Q ss_pred             hhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEE--EcCCCCCccHHHHHHH
Q 018072          187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDF--VNTSEHDRPIQEVIAE  260 (361)
Q Consensus       187 ~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~v--v~~~~~~~~~~~~i~~  260 (361)
                      +.+.++++||++||=+|+|. |..+..+++. +. +|+++|.+++-++.+++    .+.+.+  +.-+..+  +     .
T Consensus         8 l~~~~~~~~~~rILDiGcGt-G~~~~~la~~-~~-~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~--~-----~   77 (234)
T d1xxla_           8 MIKTAECRAEHRVLDIGAGA-GHTALAFSPY-VQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAES--L-----P   77 (234)
T ss_dssp             HHHHHTCCTTCEEEEESCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTB--C-----C
T ss_pred             HHHHhCCCCCCEEEEeCCcC-cHHHHHHHHh-CC-eEEEEeCChhhhhhhhhhhccccccccccccccccc--c-----c
Confidence            46788999999999999976 7777777764 55 89999999987776643    444321  1111111  0     1


Q ss_pred             HcCCCccEEEEccC------ChHHHHHHHHHhcCCCcEEEEE
Q 018072          261 MTNGGVDRSVECTG------NIDNMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       261 ~~~~g~Dvvid~~g------~~~~~~~~~~~l~~~~G~iv~~  296 (361)
                      +.++.||+|+..-.      -...+..+.+.|+++ |++++.
T Consensus        78 ~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~~~~~  118 (234)
T d1xxla_          78 FPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQD-GRFLLV  118 (234)
T ss_dssp             SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             ccccccceeeeeceeecccCHHHHHHHHHHeeCCC-cEEEEE
Confidence            22347999986422      234678889999997 998775

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=96.55  E-value=0.0038  Score=53.10  Aligned_cols=77  Identities=19%  Similarity=0.206  Sum_probs=52.0

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCEE-EcCCCCC-ccHHHHHHHHcC--CCccE
Q 018072          198 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDF-VNTSEHD-RPIQEVIAEMTN--GGVDR  268 (361)
Q Consensus       198 ~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~v-v~~~~~~-~~~~~~i~~~~~--~g~Dv  268 (361)
                      .+||+|+ +++|.+.++.+...|+ +|+.+++++++++.+    ++.|.... +.-+-.+ +++.+.+....+  +++|+
T Consensus         3 ValITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           3 VALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             EEEEcCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            4588887 8999999998888999 899999999887655    34565432 2222222 223333333322  37999


Q ss_pred             EEEccCC
Q 018072          269 SVECTGN  275 (361)
Q Consensus       269 vid~~g~  275 (361)
                      +++++|.
T Consensus        82 lVnnAG~   88 (255)
T d1gega_          82 IVNNAGV   88 (255)
T ss_dssp             EEECCCC
T ss_pred             EEecccc
Confidence            9999874

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=96.52  E-value=0.0075  Score=51.21  Aligned_cols=95  Identities=24%  Similarity=0.277  Sum_probs=64.5

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcCCCccE
Q 018072          193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGGVDR  268 (361)
Q Consensus       193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dv  268 (361)
                      .++|++||=+|+|. |.+++.++ ..|+ +|+++|.+++..+.+++    .|....+.  ..+  ..+   .+..+.||+
T Consensus       118 ~~~g~~VLDiGcGs-G~l~i~aa-~~g~-~V~gvDis~~av~~A~~na~~n~~~~~~~--~~d--~~~---~~~~~~fD~  187 (254)
T d2nxca1         118 LRPGDKVLDLGTGS-GVLAIAAE-KLGG-KALGVDIDPMVLPQAEANAKRNGVRPRFL--EGS--LEA---ALPFGPFDL  187 (254)
T ss_dssp             CCTTCEEEEETCTT-SHHHHHHH-HTTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEE--ESC--HHH---HGGGCCEEE
T ss_pred             cCccCEEEEcccch-hHHHHHHH-hcCC-EEEEEECChHHHHHHHHHHHHcCCceeEE--ecc--ccc---cccccccch
Confidence            58999999999875 66666555 4687 89999999998888764    45543221  111  222   233358999


Q ss_pred             EEEccCCh---HHHHHHHHHhcCCCcEEEEEcC
Q 018072          269 SVECTGNI---DNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       269 vid~~g~~---~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      |+.+....   +.++...+.|+++ |++++.|.
T Consensus       188 V~ani~~~~l~~l~~~~~~~LkpG-G~lilSgi  219 (254)
T d2nxca1         188 LVANLYAELHAALAPRYREALVPG-GRALLTGI  219 (254)
T ss_dssp             EEEECCHHHHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             hhhccccccHHHHHHHHHHhcCCC-cEEEEEec
Confidence            99765432   2345677889997 99988664

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=96.50  E-value=0.003  Score=49.51  Aligned_cols=94  Identities=23%  Similarity=0.299  Sum_probs=71.7

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEE
Q 018072          192 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  271 (361)
Q Consensus       192 ~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid  271 (361)
                      -+=.|.+++|.|=|-+|.-.++-++.+|+ +|++++.++-+.=++.--|.. +..       ..+.+     +..|+++-
T Consensus        19 ~~laGk~vvV~GYG~vGrG~A~~~rg~Ga-~V~V~E~DPi~alqA~mdGf~-v~~-------~~~a~-----~~aDi~vT   84 (163)
T d1v8ba1          19 FLISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGFN-VVT-------LDEIV-----DKGDFFIT   84 (163)
T ss_dssp             CCCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTCE-ECC-------HHHHT-----TTCSEEEE
T ss_pred             ceecCCEEEEecccccchhHHHHHHhCCC-EEEEEecCchhhHHHHhcCCc-cCc-------hhHcc-----ccCcEEEE
Confidence            35789999999999999999999999999 999999999765555434442 211       22221     24799999


Q ss_pred             ccCChHHH-HHHHHHhcCCCcEEEEEcCCC
Q 018072          272 CTGNIDNM-ISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       272 ~~g~~~~~-~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      ++|+.+.+ ..-++.|+.+ ..+...|...
T Consensus        85 aTGn~~vI~~~h~~~MKdg-aIl~N~GHfd  113 (163)
T d1v8ba1          85 CTGNVDVIKLEHLLKMKNN-AVVGNIGHFD  113 (163)
T ss_dssp             CCSSSSSBCHHHHTTCCTT-CEEEECSSTT
T ss_pred             cCCCCccccHHHHHHhhCC-eEEEeccccc
Confidence            99997754 4778899987 8888888654

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=96.50  E-value=0.0046  Score=51.62  Aligned_cols=93  Identities=18%  Similarity=0.225  Sum_probs=68.5

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEc
Q 018072          193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  272 (361)
Q Consensus       193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~  272 (361)
                      ++++.+||=+|+|. |..+..+++ .|+ +|+++|.+++.++.+++.+....+.....+  +     .+.++.||+|+..
T Consensus        40 ~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~giD~s~~~l~~a~~~~~~~~~~~~~~~--l-----~~~~~~fD~ii~~  109 (246)
T d2avna1          40 LKNPCRVLDLGGGT-GKWSLFLQE-RGF-EVVLVDPSKEMLEVAREKGVKNVVEAKAED--L-----PFPSGAFEAVLAL  109 (246)
T ss_dssp             CCSCCEEEEETCTT-CHHHHHHHT-TTC-EEEEEESCHHHHHHHHHHTCSCEEECCTTS--C-----CSCTTCEEEEEEC
T ss_pred             cCCCCEEEEECCCC-chhcccccc-cce-EEEEeecccccccccccccccccccccccc--c-----ccccccccceeee
Confidence            56788999999985 888888876 487 899999999999999998776665543333  1     1223479999864


Q ss_pred             cC------C-hHHHHHHHHHhcCCCcEEEEE
Q 018072          273 TG------N-IDNMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       273 ~g------~-~~~~~~~~~~l~~~~G~iv~~  296 (361)
                      ..      . ...+....+.|+++ |.+++.
T Consensus       110 ~~~~~~~~d~~~~l~~i~r~Lk~g-G~~ii~  139 (246)
T d2avna1         110 GDVLSYVENKDKAFSEIRRVLVPD-GLLIAT  139 (246)
T ss_dssp             SSHHHHCSCHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             cchhhhhhhHHHHHHHHHhhcCcC-cEEEEE
Confidence            32      2 23567888999997 988753

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.49  E-value=0.00042  Score=58.34  Aligned_cols=99  Identities=16%  Similarity=0.177  Sum_probs=65.3

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCE--EEcCCCCCccHHHHHHHHcCCCccEEE
Q 018072          193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--FVNTSEHDRPIQEVIAEMTNGGVDRSV  270 (361)
Q Consensus       193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~--vv~~~~~~~~~~~~i~~~~~~g~Dvvi  270 (361)
                      ..+|.+||-+|+|. |..+..+++..+. +|++++.+++.++.+++.....  .+.....+  .......+.++.||.|+
T Consensus        51 ~~~g~~VLdIGcG~-G~~a~~~a~~~~~-~v~~id~s~~~~~~a~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~fD~i~  126 (229)
T d1zx0a1          51 SSKGGRVLEVGFGM-AIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGL--WEDVAPTLPDGHFDGIL  126 (229)
T ss_dssp             TTTCEEEEEECCTT-SHHHHHHHTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEESC--HHHHGGGSCTTCEEEEE
T ss_pred             ccCCCeEEEeeccc-hHHHHHHHHcCCC-eEEEeCCCHHHHHHHHHHhhhccccccccccc--cccccccccccccccee
Confidence            36789999999875 6777888876555 8999999999999987643221  11111111  33333344455788885


Q ss_pred             -EccCC----------hHHHHHHHHHhcCCCcEEEEE
Q 018072          271 -ECTGN----------IDNMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       271 -d~~g~----------~~~~~~~~~~l~~~~G~iv~~  296 (361)
                       |.+..          +..+..+.+.|+++ |+++..
T Consensus       127 fD~~~~~~~~~~~~~~~~~~~~~~r~LkpG-G~~~~~  162 (229)
T d1zx0a1         127 YDTYPLSEETWHTHQFNFIKNHAFRLLKPG-GVLTYC  162 (229)
T ss_dssp             ECCCCCBGGGTTTHHHHHHHHTHHHHEEEE-EEEEEC
T ss_pred             ecccccccccccccCHHHHHHHHHHHcCCC-cEEEEE
Confidence             54432          12456788899997 998764

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=96.44  E-value=0.0041  Score=53.03  Aligned_cols=80  Identities=20%  Similarity=0.314  Sum_probs=52.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHH-----HHcCCCEEEcC-CCCC-ccHHHHHHHHcC--
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS-KRFEEA-----KKFGVTDFVNT-SEHD-RPIQEVIAEMTN--  263 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~-~~~~~~-----~~~G~~~vv~~-~~~~-~~~~~~i~~~~~--  263 (361)
                      +|.++||+|+ +++|.+.++.+...|+ +|+.+++++ ++++.+     .+.|....... +-.+ +++.+.+.....  
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            5788999987 8999999999999999 899998864 444433     23455443222 2222 223333333222  


Q ss_pred             CCccEEEEccCC
Q 018072          264 GGVDRSVECTGN  275 (361)
Q Consensus       264 ~g~Dvvid~~g~  275 (361)
                      +++|++++++|.
T Consensus        82 G~iDiLVnnAG~   93 (260)
T d1x1ta1          82 GRIDILVNNAGI   93 (260)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCcEEEeeccc
Confidence            379999999874

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.43  E-value=0.0037  Score=53.25  Aligned_cols=102  Identities=21%  Similarity=0.267  Sum_probs=66.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEE-cCChhhHHH----HHHcCCCEE-EcCCCCC-ccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKRFEE----AKKFGVTDF-VNTSEHD-RPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~-~~~~~~~~~----~~~~G~~~v-v~~~~~~-~~~~~~i~~~~~--~  264 (361)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+ .++++..+.    +++.|.+.. +..+-.+ .+..+.+.....  +
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~G~-~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g   83 (259)
T d1ja9a_           5 AGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG   83 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcC
Confidence            5889999988 8999999999999999 67665 555554443    455676543 3222222 223333333322  3


Q ss_pred             CccEEEEccCChH-------------------------HHHHHHHHhcCCCcEEEEEcC
Q 018072          265 GVDRSVECTGNID-------------------------NMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       265 g~Dvvid~~g~~~-------------------------~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      ++|++++++|...                         ....+++.|+++ |.++.+..
T Consensus        84 ~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-g~~iii~s  141 (259)
T d1ja9a_          84 GLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSS  141 (259)
T ss_dssp             CEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             CCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC-Cccccccc
Confidence            7999999988411                         235667778887 87777754

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.36  E-value=0.017  Score=48.06  Aligned_cols=103  Identities=19%  Similarity=0.178  Sum_probs=69.1

Q ss_pred             hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHHc----CCCEEEcCCCCCccHHHHHHHHc
Q 018072          188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMT  262 (361)
Q Consensus       188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~~----G~~~vv~~~~~~~~~~~~i~~~~  262 (361)
                      .+...++||++||=+|+|. |..+..+|+..|. .+|+++|.+++.++.+++.    +....+..+...  . +... ..
T Consensus        66 l~~l~i~pG~~VLDlGaGs-G~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~--~-~~~~-~~  140 (227)
T d1g8aa_          66 LKNFPIKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATK--P-EEYR-AL  140 (227)
T ss_dssp             CCCCCCCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTC--G-GGGT-TT
T ss_pred             ccccccCCCCEEEEeccCC-CHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCC--c-cccc-cc
Confidence            3567799999999999976 8888888888763 4999999999988887653    222222222221  0 0100 11


Q ss_pred             CCCccEEEEccCChH----HHHHHHHHhcCCCcEEEEE
Q 018072          263 NGGVDRSVECTGNID----NMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       263 ~~g~Dvvid~~g~~~----~~~~~~~~l~~~~G~iv~~  296 (361)
                      ...+|+++..+..++    .+..+.+.|+++ |+++++
T Consensus       141 ~~~vD~i~~d~~~~~~~~~~l~~~~~~Lkpg-G~lvi~  177 (227)
T d1g8aa_         141 VPKVDVIFEDVAQPTQAKILIDNAEVYLKRG-GYGMIA  177 (227)
T ss_dssp             CCCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             ccceEEEEEEccccchHHHHHHHHHHhcccC-CeEEEE
Confidence            136888887654322    467778899997 988765

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=96.34  E-value=0.0071  Score=48.49  Aligned_cols=37  Identities=32%  Similarity=0.386  Sum_probs=33.3

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 018072          193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  230 (361)
Q Consensus       193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~  230 (361)
                      ...+.+|+|+|+|+.|+.|+..+...|. +|+.+++.+
T Consensus        40 ~~~~k~V~IIGaGPAGL~AA~~la~~G~-~Vtl~E~~~   76 (179)
T d1ps9a3          40 AVQKKNLAVVGAGPAGLAFAINAAARGH-QVTLFDAHS   76 (179)
T ss_dssp             CSSCCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSS
T ss_pred             CCCCcEEEEECccHHHHHHHHHHHhhcc-ceEEEeccC
Confidence            4556899999999999999999999999 999998875

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.34  E-value=0.0056  Score=53.44  Aligned_cols=102  Identities=19%  Similarity=0.265  Sum_probs=66.6

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCh---------hhHHH----HHHcCCCEEEcCCCCCccHHHHHHH
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS---------KRFEE----AKKFGVTDFVNTSEHDRPIQEVIAE  260 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~---------~~~~~----~~~~G~~~vv~~~~~~~~~~~~i~~  260 (361)
                      .|.++||+|+ +++|.+.++.+...|+ +|+..+++.         ++++.    ....+.....+..+.+ +..+.+..
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga-~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~v~~   83 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVE-AGEKLVKT   83 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGG-GHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHH-HHHHHHHH
Confidence            4788999998 8999999999999999 899886543         23332    2334555556555433 24444443


Q ss_pred             HcC--CCccEEEEccCCh----------H---------------HHHHHHHHhc--CCCcEEEEEcCC
Q 018072          261 MTN--GGVDRSVECTGNI----------D---------------NMISAFECVH--DGWGVAVLVGVP  299 (361)
Q Consensus       261 ~~~--~g~Dvvid~~g~~----------~---------------~~~~~~~~l~--~~~G~iv~~g~~  299 (361)
                      ...  +++|++|+++|..          +               ....+++.|+  .+ |+|+.++..
T Consensus        84 ~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~-G~IV~isS~  150 (302)
T d1gz6a_          84 ALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNY-GRIIMTASA  150 (302)
T ss_dssp             HHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEECCH
T ss_pred             HHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCC-cEEEEeCCh
Confidence            322  3799999998841          1               1245556664  34 899999753

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=96.31  E-value=0.0021  Score=55.53  Aligned_cols=102  Identities=16%  Similarity=0.089  Sum_probs=69.7

Q ss_pred             hhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCE---EEcCCCCCccHHHHHH
Q 018072          187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD---FVNTSEHDRPIQEVIA  259 (361)
Q Consensus       187 ~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~---vv~~~~~~~~~~~~i~  259 (361)
                      +.....+++|++||=+|+|. |..+..+++..|+ +|++++.++..++.+++    .|...   ++.-+-.+  +     
T Consensus        59 l~~~~~l~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~--l-----  129 (282)
T d2o57a1          59 LAMTGVLQRQAKGLDLGAGY-GGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLE--I-----  129 (282)
T ss_dssp             HHHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTS--C-----
T ss_pred             HHHhcCCCCCCEEEEeCCCC-cHHHhhhhccCCc-EEEEEeccchhhhhhhccccccccccccccccccccc--c-----
Confidence            34567899999999999975 6777788887788 89999999987776654    34431   22211111  0     


Q ss_pred             HHcCCCccEEEEcc-----CC-hHHHHHHHHHhcCCCcEEEEEcC
Q 018072          260 EMTNGGVDRSVECT-----GN-IDNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       260 ~~~~~g~Dvvid~~-----g~-~~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      .+.++.||+|+-.-     .. ...+..+.+.|+++ |++++...
T Consensus       130 ~~~~~sfD~V~~~~~l~h~~d~~~~l~~~~~~Lkpg-G~l~~~~~  173 (282)
T d2o57a1         130 PCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPR-GVMAITDP  173 (282)
T ss_dssp             SSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             cccccccchhhccchhhhccCHHHHHHHHHHhcCCC-cEEEEEEe
Confidence            11224799998632     22 23577899999997 99887643

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.26  E-value=0.01  Score=47.07  Aligned_cols=71  Identities=15%  Similarity=0.147  Sum_probs=49.9

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCC---CEEEcCCCCCccHHHHHHHHcCCCccE
Q 018072          193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGV---TDFVNTSEHDRPIQEVIAEMTNGGVDR  268 (361)
Q Consensus       193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~---~~vv~~~~~~~~~~~~i~~~~~~g~Dv  268 (361)
                      ..++.+|+|+|+|+++.+++..+...+ .+|+.+.|+.++.+.+.+ ++.   ...+....           .....+|+
T Consensus        15 ~~~~k~vlIlGaGGaarai~~aL~~~~-~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~-----------~~~~~~di   82 (171)
T d1p77a1          15 LRPNQHVLILGAGGATKGVLLPLLQAQ-QNIVLANRTFSKTKELAERFQPYGNIQAVSMDS-----------IPLQTYDL   82 (171)
T ss_dssp             CCTTCEEEEECCSHHHHTTHHHHHHTT-CEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG-----------CCCSCCSE
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHcccC-ceeeeccchHHHHHHHHHHHhhccccchhhhcc-----------ccccccce
Confidence            457889999999999999988877655 499999999988776644 321   11111111           11136899


Q ss_pred             EEEccCC
Q 018072          269 SVECTGN  275 (361)
Q Consensus       269 vid~~g~  275 (361)
                      +|+|++.
T Consensus        83 iIN~tp~   89 (171)
T d1p77a1          83 VINATSA   89 (171)
T ss_dssp             EEECCCC
T ss_pred             eeecccc
Confidence            9999875

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=96.24  E-value=0.0078  Score=49.79  Aligned_cols=100  Identities=17%  Similarity=0.222  Sum_probs=68.6

Q ss_pred             hhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCE--EEcCCCCCccHHHHHHH
Q 018072          187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD--FVNTSEHDRPIQEVIAE  260 (361)
Q Consensus       187 ~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~--vv~~~~~~~~~~~~i~~  260 (361)
                      +.+.++++++++||=+|+| .|..+..+++. |. +|+++|.+++-++.+++    .+.+.  ++..+..+  +     .
T Consensus         7 ll~~~~l~~~~rVLDiGcG-~G~~~~~l~~~-~~-~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~--l-----~   76 (231)
T d1vl5a_           7 LMQIAALKGNEEVLDVATG-GGHVANAFAPF-VK-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQ--M-----P   76 (231)
T ss_dssp             HHHHHTCCSCCEEEEETCT-TCHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-C--C-----C
T ss_pred             HHHhcCCCCcCEEEEeccc-CcHHHHHHHHh-CC-EEEEEECCHHHHhhhhhccccccccccccccccccc--c-----c
Confidence            4677899999999999997 47777777654 65 89999999987777643    45442  22222211  1     1


Q ss_pred             HcCCCccEEEEccC-----Ch-HHHHHHHHHhcCCCcEEEEEc
Q 018072          261 MTNGGVDRSVECTG-----NI-DNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       261 ~~~~g~Dvvid~~g-----~~-~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      +.++.||+|+..-.     .+ ..+..+.+.|+++ |++++.-
T Consensus        77 ~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~Lkpg-G~l~i~~  118 (231)
T d1vl5a_          77 FTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKG-GQLLLVD  118 (231)
T ss_dssp             SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             ccccccccccccccccccCCHHHHHHHHHHhcCCC-cEEEEEe
Confidence            22347999986422     22 4678999999997 9988753

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.23  E-value=0.0044  Score=54.74  Aligned_cols=103  Identities=25%  Similarity=0.274  Sum_probs=66.6

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHc--CCCc
Q 018072          193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT--NGGV  266 (361)
Q Consensus       193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~--~~g~  266 (361)
                      +++|++||=+++|. |..++.+|+ .|+.+|+++|.+++.++.+++    .|....+.....+  ..+.+..+.  ++.|
T Consensus       143 ~~~g~~VLDl~~g~-G~~si~~a~-~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d--~~~~~~~~~~~~~~f  218 (324)
T d2as0a2         143 VQPGDRVLDVFTYT-GGFAIHAAI-AGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGS--AFEEMEKLQKKGEKF  218 (324)
T ss_dssp             CCTTCEEEETTCTT-THHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESC--HHHHHHHHHHTTCCE
T ss_pred             cCCCCeeecccCcc-cchhhhhhh-cCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeech--hhhhhHHHHhccCCC
Confidence            58899998886632 333444443 477799999999999888755    5653222222233  444444432  2389


Q ss_pred             cEEEEccCC---------------hHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072          267 DRSVECTGN---------------IDNMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       267 Dvvid~~g~---------------~~~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      |+|+-....               .+.+..++++|+++ |.++.+....
T Consensus       219 D~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pG-G~lv~~s~s~  266 (324)
T d2as0a2         219 DIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDG-GILVTCSCSQ  266 (324)
T ss_dssp             EEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEE-EEEEEEECCT
T ss_pred             CchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCC-cEEEEEeCCc
Confidence            999964432               12467788899997 9999887554

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.23  E-value=0.0088  Score=48.83  Aligned_cols=82  Identities=26%  Similarity=0.246  Sum_probs=60.5

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  273 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~  273 (361)
                      -.|.+|+|.|.|.+|..+++++...|+ +|++++.+.++.+....+|.+.+- .  .         ++.....|+++=|.
T Consensus        25 L~gk~v~IqG~G~VG~~~A~~L~~~Ga-kvvv~d~d~~~~~~~~~~g~~~~~-~--~---------~~~~~~~DI~iPcA   91 (201)
T d1c1da1          25 LDGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHTAVA-L--E---------DVLSTPCDVFAPCA   91 (201)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEECC-G--G---------GGGGCCCSEEEECS
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEecchHHHHHHHHhhcccccC-c--c---------ccccccceeeeccc
Confidence            368899999999999999999999998 999999999999999888875421 1  1         11222678888776


Q ss_pred             CChHHHHHHHHHhcC
Q 018072          274 GNIDNMISAFECVHD  288 (361)
Q Consensus       274 g~~~~~~~~~~~l~~  288 (361)
                      .+...-+...+.++-
T Consensus        92 ~~~~I~~~~a~~i~a  106 (201)
T d1c1da1          92 MGGVITTEVARTLDC  106 (201)
T ss_dssp             CSCCBCHHHHHHCCC
T ss_pred             ccccccHHHHhhhhh
Confidence            543433455555643

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.20  E-value=0.00089  Score=56.62  Aligned_cols=75  Identities=23%  Similarity=0.245  Sum_probs=51.3

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcC--CCccEEEE
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN--GGVDRSVE  271 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~--~g~Dvvid  271 (361)
                      .|+++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.    ....|..+.+ ++.+.+.....  +++|++++
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~----~~~~Dv~~~~-~v~~~~~~~~~~~g~iDiLVn   79 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKGLF----GVEVDVTDSD-AVDRAFTAVEEHQGPVEVLVS   79 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTTSE----EEECCTTCHH-HHHHHHHHHHHHHSSCSEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCcchhcCce----EEEEecCCHH-HHHHHHHHHHHhcCCceEEEe
Confidence            5789999988 8999999999999999 9999999887654321    1223333322 23333333322  37999999


Q ss_pred             ccCC
Q 018072          272 CTGN  275 (361)
Q Consensus       272 ~~g~  275 (361)
                      ++|.
T Consensus        80 nAG~   83 (237)
T d1uzma1          80 NAGL   83 (237)
T ss_dssp             ECSC
T ss_pred             eecc
Confidence            9874

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.19  E-value=0.00074  Score=57.67  Aligned_cols=72  Identities=24%  Similarity=0.200  Sum_probs=50.0

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcC----CCEEEcCCCCCccHHHHHHHHcC--CCccEEE
Q 018072          198 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG----VTDFVNTSEHDRPIQEVIAEMTN--GGVDRSV  270 (361)
Q Consensus       198 ~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G----~~~vv~~~~~~~~~~~~i~~~~~--~g~Dvvi  270 (361)
                      ++||+|+ +++|++.++.+...|+ +|+..+++.++++.+++.+    ...+.+..    +..+.+....+  +++|+++
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~----~~~~~~~~~~~~~G~iDiLV   76 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKPMSEQ----EPAELIEAVTSAYGQVDVLV   76 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEECCCC----SHHHHHHHHHHHHSCCCEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhhhCcEEEeccCCHH----HHHHHHHHHHHHcCCCCEEE
Confidence            6889988 8999999998889999 9999999988887775532    22222221    13333333222  3799999


Q ss_pred             EccC
Q 018072          271 ECTG  274 (361)
Q Consensus       271 d~~g  274 (361)
                      +++|
T Consensus        77 nNAg   80 (252)
T d1zmta1          77 SNDI   80 (252)
T ss_dssp             EECC
T ss_pred             ECCc
Confidence            8766

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.18  E-value=0.0034  Score=44.56  Aligned_cols=36  Identities=25%  Similarity=0.366  Sum_probs=32.1

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChh
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK  231 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~  231 (361)
                      .|.+|+|+|.|..|+.+++++...|+ +|+++|.+..
T Consensus         4 ~~K~v~ViGlG~sG~s~a~~L~~~g~-~v~~~D~~~~   39 (93)
T d2jfga1           4 QGKNVVIIGLGLTGLSCVDFFLARGV-TPRVMDTRMT   39 (93)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHHHTTC-CCEEEESSSS
T ss_pred             CCCEEEEEeECHHHHHHHHHHHHCCC-EEEEeeCCcC
Confidence            46789999999999999999999998 8999988553

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=96.12  E-value=0.019  Score=48.25  Aligned_cols=101  Identities=20%  Similarity=0.251  Sum_probs=62.2

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCeEEEE-cCChhhHHHH----HHcCCCEE-EcCCCCC-ccHHHHHHHHcC--CCcc
Q 018072          198 SVAVFGL-GAVGLAAAEGARIAGASRIIGV-DRSSKRFEEA----KKFGVTDF-VNTSEHD-RPIQEVIAEMTN--GGVD  267 (361)
Q Consensus       198 ~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~-~~~~~~~~~~----~~~G~~~v-v~~~~~~-~~~~~~i~~~~~--~g~D  267 (361)
                      .+||+|+ +++|.+.++.+...|+ +|+.. .+++++++.+    ++.|.... +..+-.+ .++.+.+....+  +++|
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGC-KVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5677787 8999999999999999 77765 4566555444    44565432 2222222 223333333322  3799


Q ss_pred             EEEEccCChH-------------------------HHHHHHHHh--cCCCcEEEEEcCCC
Q 018072          268 RSVECTGNID-------------------------NMISAFECV--HDGWGVAVLVGVPS  300 (361)
Q Consensus       268 vvid~~g~~~-------------------------~~~~~~~~l--~~~~G~iv~~g~~~  300 (361)
                      ++++++|...                         ....+++.|  +.+ |+++.++...
T Consensus        82 iLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~-G~IVnisS~~  140 (244)
T d1edoa_          82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRK-GRIINIASVV  140 (244)
T ss_dssp             EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-EEEEEECCTH
T ss_pred             ccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCC-cEEEEEcChh
Confidence            9999987411                         124555555  345 9999997643

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=96.05  E-value=0.0091  Score=50.96  Aligned_cols=80  Identities=10%  Similarity=0.079  Sum_probs=51.4

Q ss_pred             CCCEEEEEcC-C--HHHHHHHHHHHHcCCCeEEEEcCChhhHHHH---HHcCC-CEEEcCCCCC-ccHHHHHHHHcC--C
Q 018072          195 RGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSKRFEEA---KKFGV-TDFVNTSEHD-RPIQEVIAEMTN--G  264 (361)
Q Consensus       195 ~g~~VlI~G~-g--~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~---~~~G~-~~vv~~~~~~-~~~~~~i~~~~~--~  264 (361)
                      +|.++||+|+ |  ++|.+.++.+...|+ +|+.++++++..+.+   .+.+. ..++.....+ .+..+.+.....  +
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~Ga-~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   82 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG   82 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcC
Confidence            5899999986 5  799999999999999 899999987533333   33232 2333222222 223333333222  3


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      .+|+++.+.|.
T Consensus        83 ~id~lV~nag~   93 (274)
T d2pd4a1          83 SLDFIVHSVAF   93 (274)
T ss_dssp             CEEEEEECCCC
T ss_pred             CCCeEEeeccc
Confidence            78999998874

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.93  E-value=0.023  Score=46.47  Aligned_cols=102  Identities=17%  Similarity=0.052  Sum_probs=66.3

Q ss_pred             hhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcCC
Q 018072          189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNG  264 (361)
Q Consensus       189 ~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~~  264 (361)
                      ....++||++||=+|+|. |..+..++...+..+|+++|.+++.++.+++    .+....+..+..+...   . .....
T Consensus        50 ~~l~lkpg~~VLDlGcG~-G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~---~-~~~~~  124 (209)
T d1nt2a_          50 HRLKLRGDERVLYLGAAS-GTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWK---Y-SGIVE  124 (209)
T ss_dssp             CCCCCCSSCEEEEETCTT-SHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGG---T-TTTCC
T ss_pred             ccCCCCCCCEEEEeCCcC-CHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCccc---c-ccccc
Confidence            346799999999999976 6677778887775699999999988877644    3332222222221000   0 01112


Q ss_pred             CccEEEEccCChH----HHHHHHHHhcCCCcEEEEE
Q 018072          265 GVDRSVECTGNID----NMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       265 g~Dvvid~~g~~~----~~~~~~~~l~~~~G~iv~~  296 (361)
                      .+|+++.....+.    .+..+.+.|+++ |++++.
T Consensus       125 ~vd~v~~~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~  159 (209)
T d1nt2a_         125 KVDLIYQDIAQKNQIEILKANAEFFLKEK-GEVVIM  159 (209)
T ss_dssp             CEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             eEEEEEecccChhhHHHHHHHHHHHhccC-CeEEEE
Confidence            5788876553222    456777899997 998776

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=95.87  E-value=0.03  Score=44.29  Aligned_cols=44  Identities=14%  Similarity=0.229  Sum_probs=38.2

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCC
Q 018072          197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV  241 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~  241 (361)
                      .+|-++|.|.+|...+.-+...|. +|+++++++++.+.+.+.++
T Consensus         3 ~nIg~IGlG~MG~~mA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~   46 (176)
T d2pgda2           3 ADIALIGLAVMGQNLILNMNDHGF-VVCAFNRTVSKVDDFLANEA   46 (176)
T ss_dssp             BSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSTHHHHHHHHTTT
T ss_pred             CcEEEEeEhHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHhcc
Confidence            468899999999998888888898 89999999999988876554

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.81  E-value=0.011  Score=49.71  Aligned_cols=77  Identities=13%  Similarity=0.200  Sum_probs=49.0

Q ss_pred             CEEEEEcC-CHHHHHHHHHHH---HcCCCeEEEEcCChhhHHHHHH---cCCCE-EE--cCCCCCccHHHHHH---HHcC
Q 018072          197 SSVAVFGL-GAVGLAAAEGAR---IAGASRIIGVDRSSKRFEEAKK---FGVTD-FV--NTSEHDRPIQEVIA---EMTN  263 (361)
Q Consensus       197 ~~VlI~G~-g~vG~~a~~~a~---~~g~~~Vi~~~~~~~~~~~~~~---~G~~~-vv--~~~~~~~~~~~~i~---~~~~  263 (361)
                      .+|||+|+ +++|++.++.+.   ..|+ +|+.+++++++++.+++   .+... ++  |..+. +++.+.+.   ....
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~-~~v~~~~~~i~~~~~   80 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNF-DAYDKLVADIEGVTK   80 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCG-GGHHHHHHHHHHHHG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccH-HHHHHHHhhhHHHhh
Confidence            47999998 899999876554   3466 89999999987766543   23222 22  23232 22333333   3333


Q ss_pred             -CCccEEEEccCC
Q 018072          264 -GGVDRSVECTGN  275 (361)
Q Consensus       264 -~g~Dvvid~~g~  275 (361)
                       +++|+++++.|.
T Consensus        81 ~~~iDiLvnNAg~   93 (248)
T d1snya_          81 DQGLNVLFNNAGI   93 (248)
T ss_dssp             GGCCSEEEECCCC
T ss_pred             cCCcceEEeeccc
Confidence             379999998873

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.75  E-value=0.038  Score=43.10  Aligned_cols=44  Identities=23%  Similarity=0.261  Sum_probs=38.5

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT  242 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~  242 (361)
                      +|.++|.|.+|...+.-+...|. .|.+.++++++.+.+.+.+..
T Consensus         3 kIg~IGlG~MG~~iA~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~   46 (162)
T d3cuma2           3 QIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVAAGAS   46 (162)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCE
T ss_pred             EEEEEEEHHHHHHHHHHHHHCCC-eEEEEECchhhhhhhhhhhcc
Confidence            68899999999988887777898 999999999999988887764

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.74  E-value=0.061  Score=44.56  Aligned_cols=103  Identities=18%  Similarity=0.162  Sum_probs=65.6

Q ss_pred             hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc----CCCEEEcCCCCCccHHHHHHHHcC
Q 018072          188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVNTSEHDRPIQEVIAEMTN  263 (361)
Q Consensus       188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~----G~~~vv~~~~~~~~~~~~i~~~~~  263 (361)
                      .+...++||++||=+|+|. |..+..+|.......|+++|.+++.++.+++.    +....+......  .. ..... .
T Consensus        67 l~~l~ikpG~~VLDlGcGs-G~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~--~~-~~~~~-~  141 (230)
T d1g8sa_          67 LKVMPIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANK--PQ-EYANI-V  141 (230)
T ss_dssp             CCCCCCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTC--GG-GGTTT-C
T ss_pred             HHhCCCCCCCEEEEeCEEc-CHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeecc--Cc-ccccc-c
Confidence            3567799999999999976 77777788765445999999999988877663    222222222221  10 00010 1


Q ss_pred             CCccEEEEccCChH----HHHHHHHHhcCCCcEEEEE
Q 018072          264 GGVDRSVECTGNID----NMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       264 ~g~Dvvid~~g~~~----~~~~~~~~l~~~~G~iv~~  296 (361)
                      ..+|+++.......    .+..+.+.|+++ |++++.
T Consensus       142 ~~v~~i~~~~~~~~~~~~~l~~~~r~LKpg-G~~~i~  177 (230)
T d1g8sa_         142 EKVDVIYEDVAQPNQAEILIKNAKWFLKKG-GYGMIA  177 (230)
T ss_dssp             CCEEEEEECCCSTTHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             ceeEEeeccccchHHHHHHHHHHHHhcccC-ceEEEE
Confidence            14566766554222    366777889997 987765

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=95.68  E-value=0.029  Score=47.18  Aligned_cols=80  Identities=18%  Similarity=0.236  Sum_probs=53.1

Q ss_pred             CCCEEEEEcC-C--HHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCC-ccHHHHHHHHcCC--
Q 018072          195 RGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHD-RPIQEVIAEMTNG--  264 (361)
Q Consensus       195 ~g~~VlI~G~-g--~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~-~~~~~~i~~~~~~--  264 (361)
                      .|+++||+|+ +  ++|.+.+..+...|+ +|+.++++++..+.+.+    .+....+.....+ .+..+........  
T Consensus         4 ~gK~~lITGass~~GIG~aiA~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (258)
T d1qsga_           4 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP   82 (258)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhccc
Confidence            6889999987 5  688999898889999 89989898776555433    4544444433333 2233333333332  


Q ss_pred             CccEEEEccCC
Q 018072          265 GVDRSVECTGN  275 (361)
Q Consensus       265 g~Dvvid~~g~  275 (361)
                      ..|+.+++++.
T Consensus        83 ~~d~~v~~a~~   93 (258)
T d1qsga_          83 KFDGFVHSIGF   93 (258)
T ss_dssp             SEEEEEECCCC
T ss_pred             ccceEEEeecc
Confidence            78999998654

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.64  E-value=0.0049  Score=51.37  Aligned_cols=106  Identities=15%  Similarity=0.027  Sum_probs=66.6

Q ss_pred             hhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCE-------------EEcCCCCCcc-H
Q 018072          189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD-------------FVNTSEHDRP-I  254 (361)
Q Consensus       189 ~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~-------------vv~~~~~~~~-~  254 (361)
                      +...+.++.+||.+|+|. |..+..+|+ .|+ +|+++|.+++.++.+++.....             .........+ +
T Consensus        39 ~~l~~~~~~rvLd~GCG~-G~~a~~LA~-~G~-~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  115 (229)
T d2bzga1          39 TFLKGKSGLRVFFPLCGK-AVEMKWFAD-RGH-SVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLY  115 (229)
T ss_dssp             HHHTTCCSCEEEETTCTT-CTHHHHHHH-TTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEE
T ss_pred             HhcCCCCCCEEEEeCCCC-cHHHHHHHh-CCC-cEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEE
Confidence            445678999999999976 777777776 588 9999999999998876532211             1000000000 0


Q ss_pred             HHHHHHH---cCCCccEEEEccC--------ChHHHHHHHHHhcCCCcEEEEEcC
Q 018072          255 QEVIAEM---TNGGVDRSVECTG--------NIDNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       255 ~~~i~~~---~~~g~Dvvid~~g--------~~~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      ...+..+   ..+.+|+|+++.-        ....+....++|+++ |++++...
T Consensus       116 ~~d~~~l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~Lkpg-G~~~l~~~  169 (229)
T d2bzga1         116 CCSIFDLPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKK-FQYLLCVL  169 (229)
T ss_dssp             ESCGGGGGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEE-EEEEEEEE
T ss_pred             EcchhhccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCc-ceEEEEEc
Confidence            0001111   1236899998652        123567888999997 98776643

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.56  E-value=0.05  Score=42.93  Aligned_cols=100  Identities=19%  Similarity=0.219  Sum_probs=64.7

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcC-CCeEEEE-cCC-hhhHHHHHHcCCCEEEcCCCCCccHHH-------HHHHHcCCCcc
Q 018072          198 SVAVFGLGAVGLAAAEGARIAG-ASRIIGV-DRS-SKRFEEAKKFGVTDFVNTSEHDRPIQE-------VIAEMTNGGVD  267 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g-~~~Vi~~-~~~-~~~~~~~~~~G~~~vv~~~~~~~~~~~-------~i~~~~~~g~D  267 (361)
                      +|.|.|-|-+|...+..+.... . .++++ +.+ ......+.+.+.+...........+.+       .+.++. .++|
T Consensus         4 rIaINGfGRIGR~v~Ral~~~~di-eiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~vD   81 (172)
T d2czca2           4 KVGVNGYGTIGKRVAYAVTKQDDM-ELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLL-EKVD   81 (172)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTE-EEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHH-TTCS
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCc-eEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhhh-ccCC
Confidence            6899999999999888776543 4 45544 333 345566677776544322211100111       001111 2699


Q ss_pred             EEEEccCChHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072          268 RSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       268 vvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      +|+||+|.-...+.+-..+..+ -+.++++.+.
T Consensus        82 vViEcTG~f~~~~~~~~hl~~G-~k~Vi~s~~~  113 (172)
T d2czca2          82 IIVDATPGGIGAKNKPLYEKAG-VKAIFQGGEK  113 (172)
T ss_dssp             EEEECCSTTHHHHHHHHHHHHT-CEEEECTTSC
T ss_pred             EEEECCCCCCCHHHHHHHHHcC-CCEEEECCCC
Confidence            9999999988888888999987 8888888755

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.53  E-value=0.025  Score=48.77  Aligned_cols=99  Identities=19%  Similarity=0.132  Sum_probs=67.4

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCC---------CEEEcCCCCCccHHHHHHHHcCC
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV---------TDFVNTSEHDRPIQEVIAEMTNG  264 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~---------~~vv~~~~~~~~~~~~i~~~~~~  264 (361)
                      ...++|||+|+|. |..+-.+++..+..+|..++.+++-.+.++++-.         ..-+...  |  -.+.+++..++
T Consensus        79 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~~--D--a~~~l~~~~~~  153 (290)
T d1xj5a_          79 PNPKKVLVIGGGD-GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIG--D--GVAFLKNAAEG  153 (290)
T ss_dssp             SCCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEES--C--HHHHHHTSCTT
T ss_pred             CCCcceEEecCCc-hHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEEc--c--HHHHHhhcccc
Confidence            4457999998765 5555577777677799999999999999887431         1111111  1  44566555445


Q ss_pred             CccEEEEccC----------ChHHHHHHHHHhcCCCcEEEEEcC
Q 018072          265 GVDRSVECTG----------NIDNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       265 g~Dvvid~~g----------~~~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      .||+||--..          +.+.++.+.+.|+++ |.++.-..
T Consensus       154 ~yDvIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~-Gi~v~q~~  196 (290)
T d1xj5a_         154 SYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPG-GVVCTQAE  196 (290)
T ss_dssp             CEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             CccEEEEcCCCCCCcchhhCCHHHHHHHHHhcCCC-cEEEEecC
Confidence            8998875332          234678999999998 99887653

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.52  E-value=0.073  Score=46.57  Aligned_cols=104  Identities=15%  Similarity=0.162  Sum_probs=68.0

Q ss_pred             hhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-----------cCCC----EEEcCCCCC
Q 018072          187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-----------FGVT----DFVNTSEHD  251 (361)
Q Consensus       187 ~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-----------~G~~----~vv~~~~~~  251 (361)
                      +.+..+++++++|+=+|+|. |..+.++|+..+..++++++.+++..+.+++           +|..    .++.-+-.+
T Consensus       143 ~~~~~~l~~~~~vlD~GcG~-G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~~~  221 (328)
T d1nw3a_         143 MIDEIKMTDDDLFVDLGSGV-GQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLS  221 (328)
T ss_dssp             HHHHSCCCTTCEEEEETCTT-SHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCTTS
T ss_pred             HHHHcCCCCCCEEEEcCCCC-CHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECcccc
Confidence            46778899999999999876 8888899999998789999999987776643           1221    122222222


Q ss_pred             ccHHHHHHHHcCCCccEEEEccC--ChH---HHHHHHHHhcCCCcEEEEEc
Q 018072          252 RPIQEVIAEMTNGGVDRSVECTG--NID---NMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       252 ~~~~~~i~~~~~~g~Dvvid~~g--~~~---~~~~~~~~l~~~~G~iv~~g  297 (361)
                      ..+.+.+.     .+|+|+-..-  .++   .+....+.|+++ |+++..-
T Consensus       222 ~~~~~~~~-----~advi~~~~~~f~~~~~~~l~e~~r~LKpG-g~iv~~~  266 (328)
T d1nw3a_         222 EEWRERIA-----NTSVIFVNNFAFGPEVDHQLKERFANMKEG-GRIVSSK  266 (328)
T ss_dssp             HHHHHHHH-----HCSEEEECCTTTCHHHHHHHHHHHTTCCTT-CEEEESS
T ss_pred             cccccccC-----cceEEEEcceecchHHHHHHHHHHHhCCCC-cEEEEec
Confidence            22222221     2578875321  222   355667778997 9998653

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.51  E-value=0.0056  Score=49.15  Aligned_cols=36  Identities=19%  Similarity=0.271  Sum_probs=31.7

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChh
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK  231 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~  231 (361)
                      +++|+|+|+|+.|+.++..++..|+..|+++++.+.
T Consensus         4 ~~kVaIIGaGpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEECChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            578999999999999999999999856888887654

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=95.36  E-value=0.38  Score=36.37  Aligned_cols=94  Identities=17%  Similarity=0.125  Sum_probs=63.9

Q ss_pred             CEEEEEc-CCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCC--CccEEEEcc
Q 018072          197 SSVAVFG-LGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG--GVDRSVECT  273 (361)
Q Consensus       197 ~~VlI~G-~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~--g~Dvvid~~  273 (361)
                      .+|.|+| .|.+|...+..++..|. .|.+.+++++........+++.++...... ...+.+.+..+.  .=.+++|+.
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~G~-~V~~~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~v~~~~~~~~~~~~iiiD~~   87 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRASGY-PISILDREDWAVAESILANADVVIVSVPIN-LTLETIERLKPYLTENMLLADLT   87 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTC-CEEEECTTCGGGHHHHHTTCSEEEECSCGG-GHHHHHHHHGGGCCTTSEEEECC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHcCC-CcEecccccccccchhhhhccccccccchh-hheeeeecccccccCCceEEEec
Confidence            5899999 69999999999999999 899999998877776667777776654433 244455554432  235888887


Q ss_pred             CChHHHHHHHHHhcCCCcEEE
Q 018072          274 GNIDNMISAFECVHDGWGVAV  294 (361)
Q Consensus       274 g~~~~~~~~~~~l~~~~G~iv  294 (361)
                      .........+....+  .+++
T Consensus        88 Svk~~~~~~~~~~~~--~~~v  106 (152)
T d2pv7a2          88 SVKREPLAKMLEVHT--GAVL  106 (152)
T ss_dssp             SCCHHHHHHHHHHCS--SEEE
T ss_pred             ccCHHHHHHHHHHcc--CCEE
Confidence            654443344444333  4554

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=95.31  E-value=0.073  Score=41.26  Aligned_cols=92  Identities=16%  Similarity=0.206  Sum_probs=55.6

Q ss_pred             CEEEEEcCCHHHH-HHHHHHHHcCCCeEEEE-cCCh--hhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcC-CCccEEEE
Q 018072          197 SSVAVFGLGAVGL-AAAEGARIAGASRIIGV-DRSS--KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN-GGVDRSVE  271 (361)
Q Consensus       197 ~~VlI~G~g~vG~-~a~~~a~~~g~~~Vi~~-~~~~--~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~-~g~Dvvid  271 (361)
                      -+|.|+|+|.+|. +.+++++....-.++++ +++.  ...++++++|......       ..+.+.+..+ .++|+||+
T Consensus         5 irvaIIGaG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~~-------~~d~l~~~~~~~~iDiVf~   77 (157)
T d1nvmb1           5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYA-------GVEGLIKLPEFADIDFVFD   77 (157)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESS-------HHHHHHHSGGGGGEEEEEE
T ss_pred             cEEEEEcCcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCccccc-------ceeeeeecccccccCEEEE
Confidence            4789999999987 46677776654355555 5554  3456788888764321       2223332222 27999999


Q ss_pred             ccCChHHHHHH--HHHhcCCCcEEEEEc
Q 018072          272 CTGNIDNMISA--FECVHDGWGVAVLVG  297 (361)
Q Consensus       272 ~~g~~~~~~~~--~~~l~~~~G~iv~~g  297 (361)
                      ++......+..  .+.+..  |.++.--
T Consensus        78 ATpag~h~~~~~~~~aa~~--G~~VID~  103 (157)
T d1nvmb1          78 ATSASAHVQNEALLRQAKP--GIRLIDL  103 (157)
T ss_dssp             CSCHHHHHHHHHHHHHHCT--TCEEEEC
T ss_pred             cCCchhHHHhHHHHHHHHc--CCEEEEc
Confidence            98764444433  344554  5554443

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=95.25  E-value=0.031  Score=48.45  Aligned_cols=74  Identities=18%  Similarity=0.226  Sum_probs=46.4

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCC-----hhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCC-CccEE
Q 018072          197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS-----SKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRS  269 (361)
Q Consensus       197 ~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~-----~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~-g~Dvv  269 (361)
                      .+|||+|+ |.+|...+..+...|. +|++++.-     .++++.+...+--+++.-+-.+   .+.+.+...+ ++|+|
T Consensus         1 ~KILVTGatGfIGs~lv~~Ll~~g~-~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~---~~~l~~~~~~~~~d~V   76 (338)
T d1orra_           1 AKLLITGGCGFLGSNLASFALSQGI-DLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRN---KNDVTRLITKYMPDSC   76 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTC---HHHHHHHHHHHCCSEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCCcccchhHHHHhhccCCcEEEEcccCC---HHHHHHHHHhcCCceE
Confidence            37999998 9999999998888898 89998631     1233444444333333332222   1233333333 68999


Q ss_pred             EEccC
Q 018072          270 VECTG  274 (361)
Q Consensus       270 id~~g  274 (361)
                      |++++
T Consensus        77 ih~aa   81 (338)
T d1orra_          77 FHLAG   81 (338)
T ss_dssp             EECCC
T ss_pred             Eeecc
Confidence            99875

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=95.24  E-value=0.12  Score=40.79  Aligned_cols=136  Identities=15%  Similarity=0.103  Sum_probs=80.4

Q ss_pred             EEEEEcCCHHHHH-HHHHHHHcCCC-eEE-EEcCChhhHHHH-HHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072          198 SVAVFGLGAVGLA-AAEGARIAGAS-RII-GVDRSSKRFEEA-KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  273 (361)
Q Consensus       198 ~VlI~G~g~vG~~-a~~~a~~~g~~-~Vi-~~~~~~~~~~~~-~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~  273 (361)
                      +|.|+|+|.+|.- .+...+..+.. .++ +.++++++.+.+ ++++...++.  +    +.+.+.   +..+|+|+.++
T Consensus         5 rigiIG~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~--~----~~ell~---~~~id~v~I~t   75 (181)
T d1zh8a1           5 RLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFD--S----YEELLE---SGLVDAVDLTL   75 (181)
T ss_dssp             EEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEES--C----HHHHHH---SSCCSEEEECC
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccccceee--e----eecccc---ccccceeeccc
Confidence            6889999999964 56666654421 455 557878776654 5577765542  1    444432   34799999999


Q ss_pred             CChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecCh-hhhc--cccEEEEeeecCCC-cCCcHHHHHHHHHcCCc
Q 018072          274 GNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKP-INVL--NERTLKGTFFGNYK-PRTDLPSVVDMYMNKVI  344 (361)
Q Consensus       274 g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~-~~~~--~~~~l~g~~~~~~~-~~~~~~~~~~~~~~~~l  344 (361)
                      ......+.+..++..  |.=+++-.+-....-.... ....  ++..+.-.+..++. ..+.+.++.+++++|++
T Consensus        76 p~~~h~~~~~~al~~--gk~V~~EKPl~~~~~e~~~l~~~~~~~~~~~~v~~~~R~~~~~~~~~~~~~~i~~G~i  148 (181)
T d1zh8a1          76 PVELNLPFIEKALRK--GVHVICEKPISTDVETGKKVVELSEKSEKTVYIAENFRENSYQKEFEDFYQVVAEGKP  148 (181)
T ss_dssp             CGGGHHHHHHHHHHT--TCEEEEESSSSSSHHHHHHHHHHHHHCSSCEEEECGGGCCHHHHHHHHHHHHHHSCCC
T ss_pred             ccccccccccccccc--chhhhcCCCCcCCHHHHHHHHHHHHHhCCeEEEEeeccccccCHHHHHHHHHHHCCCC
Confidence            886677788777775  6667775433221111111 1111  34443222211211 12567888899999887

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.21  E-value=0.072  Score=47.99  Aligned_cols=104  Identities=13%  Similarity=0.129  Sum_probs=68.1

Q ss_pred             hhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc---------------CCCEEEcCCC-C
Q 018072          187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF---------------GVTDFVNTSE-H  250 (361)
Q Consensus       187 ~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~---------------G~~~vv~~~~-~  250 (361)
                      +++..++++|+++|=+|+|. |..+.++|+..|..+|++++.++...+.+++.               +........+ .
T Consensus       208 Il~~l~Lkpgd~fLDLGCG~-G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~~~f~  286 (406)
T d1u2za_         208 VYQQCQLKKGDTFMDLGSGV-GNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFV  286 (406)
T ss_dssp             HHHHTTCCTTCEEEEESCTT-SHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCST
T ss_pred             HHHHhCCCCCCEEEeCCCCC-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeeeeechh
Confidence            46778999999999899876 89999999999977999999999877776542               1111111111 1


Q ss_pred             CccHHHHHHHHcCCCccEEEEcc--CCh---HHHHHHHHHhcCCCcEEEEE
Q 018072          251 DRPIQEVIAEMTNGGVDRSVECT--GNI---DNMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       251 ~~~~~~~i~~~~~~g~Dvvid~~--g~~---~~~~~~~~~l~~~~G~iv~~  296 (361)
                      +.+.   ..... ..+|+++...  -.+   ..+....+.|+++ |+++..
T Consensus       287 ~~~~---~d~~~-~~adVV~inn~~f~~~l~~~L~ei~r~LKPG-GrIVs~  332 (406)
T d1u2za_         287 DNNR---VAELI-PQCDVILVNNFLFDEDLNKKVEKILQTAKVG-CKIISL  332 (406)
T ss_dssp             TCHH---HHHHG-GGCSEEEECCTTCCHHHHHHHHHHHTTCCTT-CEEEES
T ss_pred             hccc---ccccc-ccceEEEEecccCchHHHHHHHHHHHhcCCC-cEEEEe
Confidence            1111   11111 1477887532  122   3466777889997 999875

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.20  E-value=0.015  Score=48.73  Aligned_cols=47  Identities=30%  Similarity=0.326  Sum_probs=39.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCCC
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVT  242 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~-~~~G~~  242 (361)
                      +|.++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+ ++++..
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~   52 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGNN   52 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCC
Confidence            5889999988 8999999999999999 899999998877665 446554

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.17  E-value=0.078  Score=42.55  Aligned_cols=40  Identities=28%  Similarity=0.412  Sum_probs=35.3

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 018072          197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK  237 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~  237 (361)
                      .+|.|+|+|.+|...++++...|. +|+.+|++++.++.+.
T Consensus         5 kkvaViGaG~mG~~iA~~~a~~G~-~V~l~D~~~~~l~~a~   44 (192)
T d1f0ya2           5 KHVTVIGGGLMGAGIAQVAAATGH-TVVLVDQTEDILAKSK   44 (192)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHH
T ss_pred             EEEEEECcCHHHHHHHHHHHhCCC-cEEEEECChHHHHHHH
Confidence            479999999999999999999999 9999999998766553

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.17  E-value=0.01  Score=50.49  Aligned_cols=93  Identities=16%  Similarity=0.172  Sum_probs=60.6

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCE---EEcCCCCCccHHHHHHHHcCC
Q 018072          192 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD---FVNTSEHDRPIQEVIAEMTNG  264 (361)
Q Consensus       192 ~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~---vv~~~~~~~~~~~~i~~~~~~  264 (361)
                      .+++|++||-.|+|. |.+++.+|+. |+.+|+++|.+++..+.+++    .|.+.   ++..+..         .+...
T Consensus       104 ~~~~g~~VlD~~aG~-G~~~l~~a~~-~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~---------~~~~~  172 (260)
T d2frna1         104 VAKPDELVVDMFAGI-GHLSLPIAVY-GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNR---------DFPGE  172 (260)
T ss_dssp             HCCTTCEEEETTCTT-TTTHHHHHHH-TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTT---------TCCCC
T ss_pred             hcCCccEEEECcceE-cHHHHHHHHh-CCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchH---------HhccC
Confidence            368999999987643 4555566665 44499999999998888754    45532   2222111         12223


Q ss_pred             -CccEEEE-cc-CChHHHHHHHHHhcCCCcEEEEE
Q 018072          265 -GVDRSVE-CT-GNIDNMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       265 -g~Dvvid-~~-g~~~~~~~~~~~l~~~~G~iv~~  296 (361)
                       .+|.|+- .. .+.+.+..+++.++++ |.+...
T Consensus       173 ~~~D~Ii~~~p~~~~~~l~~a~~~l~~g-G~lh~~  206 (260)
T d2frna1         173 NIADRILMGYVVRTHEFIPKALSIAKDG-AIIHYH  206 (260)
T ss_dssp             SCEEEEEECCCSSGGGGHHHHHHHEEEE-EEEEEE
T ss_pred             CCCCEEEECCCCchHHHHHHHHhhcCCC-CEEEEE
Confidence             6886654 32 3445788999999997 877544

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=95.16  E-value=0.021  Score=47.87  Aligned_cols=102  Identities=15%  Similarity=0.187  Sum_probs=63.8

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCC------eEEEEcCChhhHHHHH----HcCCCEE-EcCCCCC-ccHHHHHHHHcC-
Q 018072          198 SVAVFGL-GAVGLAAAEGARIAGAS------RIIGVDRSSKRFEEAK----KFGVTDF-VNTSEHD-RPIQEVIAEMTN-  263 (361)
Q Consensus       198 ~VlI~G~-g~vG~~a~~~a~~~g~~------~Vi~~~~~~~~~~~~~----~~G~~~v-v~~~~~~-~~~~~~i~~~~~-  263 (361)
                      .|||+|+ +++|.+.+..+...|++      .|+.+++++++++.+.    +.|.... +.-+-.+ .++.+.+..... 
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER   82 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            3678888 89999999888888873      3888999998876653    3454332 2222222 223333333322 


Q ss_pred             -CCccEEEEccCCh----------H---------------HHHHHHHHhc--CCCcEEEEEcCCC
Q 018072          264 -GGVDRSVECTGNI----------D---------------NMISAFECVH--DGWGVAVLVGVPS  300 (361)
Q Consensus       264 -~g~Dvvid~~g~~----------~---------------~~~~~~~~l~--~~~G~iv~~g~~~  300 (361)
                       +.+|++++++|..          +               ....+++.|+  .+ |+++.++...
T Consensus        83 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~-G~Ii~isS~~  146 (240)
T d2bd0a1          83 YGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHS-GHIFFITSVA  146 (240)
T ss_dssp             TSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-EEEEEECCGG
T ss_pred             cCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCC-CceEEEechh
Confidence             3799999998741          1               1244555664  34 8999987544

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.14  E-value=0.056  Score=43.86  Aligned_cols=93  Identities=13%  Similarity=0.164  Sum_probs=62.1

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCE-EEcCCCCCccHHHHHHHHcCCCcc
Q 018072          193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FVNTSEHDRPIQEVIAEMTNGGVD  267 (361)
Q Consensus       193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~-vv~~~~~~~~~~~~i~~~~~~g~D  267 (361)
                      ++++++||=+|+|. |..+..+++ .|. +|+++|.+++.++.+++    .+... .+..+..+  +     .+.++.+|
T Consensus        35 l~~~~~ILDiGcG~-G~~~~~la~-~~~-~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~--l-----~~~~~~fD  104 (226)
T d1ve3a1          35 MKKRGKVLDLACGV-GGFSFLLED-YGF-EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARK--L-----SFEDKTFD  104 (226)
T ss_dssp             CCSCCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTS--C-----CSCTTCEE
T ss_pred             cCCCCEEEEECCCc-chhhhhHhh-hhc-ccccccccccchhhhhhhhcccccccccccccccc--c-----cccCcCce
Confidence            57889999999976 777778876 477 89999999998877754    33322 22221111  0     01223799


Q ss_pred             EEEEccC-----ChH---HHHHHHHHhcCCCcEEEEE
Q 018072          268 RSVECTG-----NID---NMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       268 vvid~~g-----~~~---~~~~~~~~l~~~~G~iv~~  296 (361)
                      +|+-.-.     ..+   .+..+.+.|+++ |++++.
T Consensus       105 ~I~~~~~l~~~~~~d~~~~l~~i~~~Lkpg-G~lii~  140 (226)
T d1ve3a1         105 YVIFIDSIVHFEPLELNQVFKEVRRVLKPS-GKFIMY  140 (226)
T ss_dssp             EEEEESCGGGCCHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             EEEEecchhhCChhHHHHHHHHHHHHcCcC-cEEEEE
Confidence            9886432     112   467888899997 998754

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=95.13  E-value=0.047  Score=42.65  Aligned_cols=131  Identities=14%  Similarity=0.172  Sum_probs=78.4

Q ss_pred             EEEEEcCCHHHHH-HHHHHHHcCCCeEEEEcCChhhHHHHH-HcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 018072          198 SVAVFGLGAVGLA-AAEGARIAGASRIIGVDRSSKRFEEAK-KFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  275 (361)
Q Consensus       198 ~VlI~G~g~vG~~-a~~~a~~~g~~~Vi~~~~~~~~~~~~~-~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~  275 (361)
                      +|.|+|+|.+|.- .+...+..+...+++++.++++.+.+. +++...++  .+    +.+.+    +..+|+|+-++..
T Consensus         3 rvgiiG~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~--~~----~~~ll----~~~iD~V~I~tp~   72 (167)
T d1xeaa1           3 KIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATC--TD----YRDVL----QYGVDAVMIHAAT   72 (167)
T ss_dssp             EEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCC--SS----TTGGG----GGCCSEEEECSCG
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhccccccc--cc----HHHhc----ccccceecccccc
Confidence            6889999999954 566665554336778888887766654 47765432  22    21121    1268999999998


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEcCCCCCceeecC-hhhhc--cccEE-EEeeecCCCcCCcHHHHHHHHHcCCc
Q 018072          276 IDNMISAFECVHDGWGVAVLVGVPSKDAVFMTK-PINVL--NERTL-KGTFFGNYKPRTDLPSVVDMYMNKVI  344 (361)
Q Consensus       276 ~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~-~~~~~--~~~~l-~g~~~~~~~~~~~~~~~~~~~~~~~l  344 (361)
                      ....+.+..++..  |.=+++-.+-....-... .....  ++..+ .|+  .++  ...+.++++.+..|++
T Consensus        73 ~~H~~~~~~al~~--gk~V~~EKP~~~~~~e~~~l~~~a~~~~~~~~vg~--~r~--~~~~~~~~~~~~~G~i  139 (167)
T d1xeaa1          73 DVHSTLAAFFLHL--GIPTFVDKPLAASAQECENLYELAEKHHQPLYVGF--NGF--DAMVQDWLQVAAAGKL  139 (167)
T ss_dssp             GGHHHHHHHHHHT--TCCEEEESCSCSSHHHHHHHHHHHHHTTCCEEEEC--GTH--HHHHHHHHHHHHHTCC
T ss_pred             ccccccccccccc--ccccccCCCCcCCHHHHHHHHHHHHHcCCEEEEEe--CcC--CHHHHHHHHHhhcCCC
Confidence            7778888888886  555666543322111111 11111  34433 332  222  2456788888888886

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.07  E-value=0.054  Score=43.76  Aligned_cols=87  Identities=20%  Similarity=0.150  Sum_probs=59.8

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      .|.+|.|+|.|.+|...++.++.+|. +|++.+.........  .+..      ..+  +.+.+.+     .|+|+.++.
T Consensus        42 ~gk~vgIiG~G~IG~~va~~l~~fg~-~V~~~d~~~~~~~~~--~~~~------~~~--l~~~l~~-----sDii~~~~p  105 (197)
T d1j4aa1          42 RDQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDIFRNPELEK--KGYY------VDS--LDDLYKQ-----ADVISLHVP  105 (197)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHH--TTCB------CSC--HHHHHHH-----CSEEEECSC
T ss_pred             cCCeEEEecccccchhHHHhHhhhcc-cccccCccccccccc--ceee------ecc--ccccccc-----cccccccCC
Confidence            47899999999999999999999999 999998765443222  2211      111  4444432     688887765


Q ss_pred             C-hHH---H-HHHHHHhcCCCcEEEEEcC
Q 018072          275 N-IDN---M-ISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       275 ~-~~~---~-~~~~~~l~~~~G~iv~~g~  298 (361)
                      - +++   + ...++.|+++ ..++.++-
T Consensus       106 lt~~T~~li~~~~l~~mk~~-a~lIN~sR  133 (197)
T d1j4aa1         106 DVPANVHMINDESIAKMKQD-VVIVNVSR  133 (197)
T ss_dssp             CCGGGTTCBSHHHHHHSCTT-EEEEECSC
T ss_pred             ccccccccccHHHHhhhCCc-cEEEecCc
Confidence            2 222   2 4677888887 88888764

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=95.05  E-value=0.11  Score=39.82  Aligned_cols=97  Identities=14%  Similarity=0.201  Sum_probs=62.2

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHc--CCCeEEEEcCChh---hHHHHHHcCCCEEEcCCCCCcc---------------HH
Q 018072          197 SSVAVFGL-GAVGLAAAEGARIA--GASRIIGVDRSSK---RFEEAKKFGVTDFVNTSEHDRP---------------IQ  255 (361)
Q Consensus       197 ~~VlI~G~-g~vG~~a~~~a~~~--g~~~Vi~~~~~~~---~~~~~~~~G~~~vv~~~~~~~~---------------~~  255 (361)
                      .+|.|+|+ |.+|..++++.+..  .+ +|+++..+..   -.++++++.+..++..+.....               ..
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~~~~~~l~~~~~~~~~~v~~g~   81 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRY-QVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAGA   81 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGE-EEEEEEESSCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTTCSSEEEESH
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCc-EEEEEEeCCCHHHHHHHHHhhccccceeccHHHHHHHHHHhhhcccccccCc
Confidence            68999999 99999999999886  35 7777766554   2444577888887655433210               11


Q ss_pred             HHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEE
Q 018072          256 EVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVL  295 (361)
Q Consensus       256 ~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~  295 (361)
                      +.+.++....+|+++.+..+-..+...+..++.+ -++.+
T Consensus        82 ~~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~g-k~iaL  120 (150)
T d1r0ka2          82 DALVEAAMMGADWTMAAIIGCAGLKATLAAIRKG-KTVAL  120 (150)
T ss_dssp             HHHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTT-SEEEE
T ss_pred             cchheecccccceeeeecCchhHHHHHHHHHhcC-CEEEE
Confidence            1112222225678888766657777777777764 44433

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=95.04  E-value=0.013  Score=49.09  Aligned_cols=35  Identities=34%  Similarity=0.305  Sum_probs=31.3

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  230 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~  230 (361)
                      ..++|+|+|+|+.|++++..++..|. +|+++++++
T Consensus         3 ~~~kV~IiGaG~aGl~~A~~L~~~G~-~v~v~Er~~   37 (265)
T d2voua1           3 TTDRIAVVGGSISGLTAALMLRDAGV-DVDVYERSP   37 (265)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCCcEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            35789999999999999999999999 999998754

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.04  E-value=0.065  Score=44.42  Aligned_cols=96  Identities=17%  Similarity=0.229  Sum_probs=65.3

Q ss_pred             hhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc----CCCE-EEcCCCCCccHHHHHHHH
Q 018072          187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTD-FVNTSEHDRPIQEVIAEM  261 (361)
Q Consensus       187 ~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~----G~~~-vv~~~~~~~~~~~~i~~~  261 (361)
                      ++.....++..+||=+|+|. |..+..+++ .|+ .|+++|.+++-++.+++.    +... ++.-+-         .++
T Consensus        33 ~~~~~~~~~~~~iLDiGcGt-G~~~~~l~~-~~~-~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~---------~~l  100 (251)
T d1wzna1          33 IFKEDAKREVRRVLDLACGT-GIPTLELAE-RGY-EVVGLDLHEEMLRVARRKAKERNLKIEFLQGDV---------LEI  100 (251)
T ss_dssp             HHHHTCSSCCCEEEEETCTT-CHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEESCG---------GGC
T ss_pred             HHHHhcCCCCCEEEEeCCCC-Cccchhhcc-cce-EEEEEeeccccccccccccccccccchheehhh---------hhc
Confidence            44556677888999999986 777777776 577 899999999888877652    3322 221111         112


Q ss_pred             c-CCCccEEEEccCC------h---HHHHHHHHHhcCCCcEEEE
Q 018072          262 T-NGGVDRSVECTGN------I---DNMISAFECVHDGWGVAVL  295 (361)
Q Consensus       262 ~-~~g~Dvvid~~g~------~---~~~~~~~~~l~~~~G~iv~  295 (361)
                      . ++.||+|+...+.      +   ..+..+.+.|+++ |++++
T Consensus       101 ~~~~~fD~I~~~~~~~~~~~~~~~~~~L~~~~~~Lkpg-G~lii  143 (251)
T d1wzna1         101 AFKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPG-GVFIT  143 (251)
T ss_dssp             CCCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEE-EEEEE
T ss_pred             ccccccchHhhhhhhhhcCChHHHHHHHHHHHHHcCCC-cEEEE
Confidence            2 2379999875321      1   3567888999997 98875

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.96  E-value=0.037  Score=45.07  Aligned_cols=73  Identities=22%  Similarity=0.183  Sum_probs=47.4

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCC-eEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072          197 SSVAVFGL-GAVGLAAAEGARIAGAS-RIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       197 ~~VlI~G~-g~vG~~a~~~a~~~g~~-~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      .+|||+|+ |.+|...+..+...|.. .|+.+.+++++.+.+.. +...+ ..+..+  .. .+.+.. .++|.|+++++
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~-~~~~~-~~d~~~--~~-~~~~~~-~~~d~vi~~a~   77 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG-EADVF-IGDITD--AD-SINPAF-QGIDALVILTS   77 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTC-CTTEE-ECCTTS--HH-HHHHHH-TTCSEEEECCC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccC-CcEEE-Eeeecc--cc-cccccc-ccceeeEEEEe
Confidence            58999997 99999999999888863 57777888877665432 33332 222222  22 222222 25899999875


Q ss_pred             C
Q 018072          275 N  275 (361)
Q Consensus       275 ~  275 (361)
                      .
T Consensus        78 ~   78 (252)
T d2q46a1          78 A   78 (252)
T ss_dssp             C
T ss_pred             e
Confidence            3

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=94.94  E-value=0.044  Score=43.81  Aligned_cols=40  Identities=25%  Similarity=0.297  Sum_probs=34.8

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 018072          197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK  237 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~  237 (361)
                      .+|.|+|+|.+|...++++...|. +|+..|.+++.++.+.
T Consensus         5 ~~vaViGaG~mG~~iA~~~a~~G~-~V~l~D~~~~~l~~~~   44 (186)
T d1wdka3           5 KQAAVLGAGIMGGGIAYQSASKGT-PILMKDINEHGIEQGL   44 (186)
T ss_dssp             SSEEEECCHHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHH
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCC-eEEEEECCHHHHhhhh
Confidence            569999999999998888888898 8999999998766653

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=94.85  E-value=0.078  Score=37.40  Aligned_cols=72  Identities=21%  Similarity=0.296  Sum_probs=52.3

Q ss_pred             CCCCCCEEEEEcCCHHHHHH-HHHHHHcCCCeEEEEcCCh-hhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEE
Q 018072          192 KPERGSSVAVFGLGAVGLAA-AEGARIAGASRIIGVDRSS-KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRS  269 (361)
Q Consensus       192 ~~~~g~~VlI~G~g~vG~~a-~~~a~~~g~~~Vi~~~~~~-~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvv  269 (361)
                      .++...++.++|.|++|..+ +++++..|. .|.+.|... ...+.+.+.|+.....+....  +         .+.|+|
T Consensus         4 ~~~~~~~ihfiGigG~GMs~LA~~L~~~G~-~VsGSD~~~~~~~~~L~~~Gi~v~~g~~~~~--i---------~~~d~v   71 (96)
T d1p3da1           4 EMRRVQQIHFIGIGGAGMSGIAEILLNEGY-QISGSDIADGVVTQRLAQAGAKIYIGHAEEH--I---------EGASVV   71 (96)
T ss_dssp             CCTTCCEEEEETTTSTTHHHHHHHHHHHTC-EEEEEESCCSHHHHHHHHTTCEEEESCCGGG--G---------TTCSEE
T ss_pred             cchhCCEEEEEEECHHHHHHHHHHHHhCCC-EEEEEeCCCChhhhHHHHCCCeEEECCcccc--C---------CCCCEE
Confidence            34667889999999889777 889999999 999999863 455666778986554333221  1         257888


Q ss_pred             EEccCC
Q 018072          270 VECTGN  275 (361)
Q Consensus       270 id~~g~  275 (361)
                      +-+.+-
T Consensus        72 V~S~AI   77 (96)
T d1p3da1          72 VVSSAI   77 (96)
T ss_dssp             EECTTS
T ss_pred             EECCCc
Confidence            877664

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=94.85  E-value=0.089  Score=43.84  Aligned_cols=34  Identities=32%  Similarity=0.428  Sum_probs=30.8

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  229 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~  229 (361)
                      ..+|+|+|+|++|..+++.+.+.|.++++.+|.+
T Consensus        30 ~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          30 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             CCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCc
Confidence            4689999999999999999999999999999754

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.81  E-value=0.018  Score=50.16  Aligned_cols=98  Identities=17%  Similarity=0.237  Sum_probs=56.2

Q ss_pred             hhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHH---HHHHcCCCE---EEcCCCCCccHHHHHHH
Q 018072          187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE---EAKKFGVTD---FVNTSEHDRPIQEVIAE  260 (361)
Q Consensus       187 ~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~---~~~~~G~~~---vv~~~~~~~~~~~~i~~  260 (361)
                      +.+.....+|++||-+|+| .|.+++.+|+ .|+++|++++.++.-..   ..++.+...   ++..+..+  +     .
T Consensus        27 i~~~~~~~~~~~VLDiGcG-~G~lsl~aa~-~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~--l-----~   97 (311)
T d2fyta1          27 IYQNPHIFKDKVVLDVGCG-TGILSMFAAK-AGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEE--V-----H   97 (311)
T ss_dssp             HHHCGGGTTTCEEEEETCT-TSHHHHHHHH-TTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTT--S-----C
T ss_pred             HHhccccCCcCEEEEECCC-CCHHHHHHHH-cCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHH--h-----c
Confidence            3344456789999999987 4666666555 57779999999886432   223344422   22222221  1     0


Q ss_pred             HcCCCccEEEEcc-----CChH---H-HHHHHHHhcCCCcEEE
Q 018072          261 MTNGGVDRSVECT-----GNID---N-MISAFECVHDGWGVAV  294 (361)
Q Consensus       261 ~~~~g~Dvvid~~-----g~~~---~-~~~~~~~l~~~~G~iv  294 (361)
                      +..+.+|+|+...     ..+.   . +...-+.|+++ |+++
T Consensus        98 ~~~~~~D~Ivse~~~~~~~~e~~~~~~~~a~~~~Lkp~-G~ii  139 (311)
T d2fyta1          98 LPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKG-GSVY  139 (311)
T ss_dssp             CSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEE-EEEE
T ss_pred             CccccceEEEEeeeeeecccccccHHHHHHHHhcCCCC-cEEe
Confidence            1223799998621     1212   2 22334578897 8775

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=94.78  E-value=0.0048  Score=48.35  Aligned_cols=89  Identities=13%  Similarity=0.152  Sum_probs=53.5

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCE--EEcCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--FVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  275 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~--vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~  275 (361)
                      +|+|+|+|.+|.+.+..+...|. .|..+++++++.+.....+.+.  .......+  ..+.+     +.+|++|-++-.
T Consensus         2 kI~IiGaG~iG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-----~~~D~iii~vka   73 (167)
T d1ks9a2           2 KITVLGCGALGQLWLTALCKQGH-EVQGWLRVPQPYCSVNLVETDGSIFNESLTAN--DPDFL-----ATSDLLLVTLKA   73 (167)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSEEEEEEECTTSCEEEEEEEES--CHHHH-----HTCSEEEECSCG
T ss_pred             EEEEECcCHHHHHHHHHHHHCCC-ceEEEEcCHHHhhhhccccCCccccccccccc--hhhhh-----cccceEEEeecc
Confidence            68999999999998888888898 8999999887554333222211  10000001  11111     258999999987


Q ss_pred             hHHHHHHHHHh----cCCCcEEEEE
Q 018072          276 IDNMISAFECV----HDGWGVAVLV  296 (361)
Q Consensus       276 ~~~~~~~~~~l----~~~~G~iv~~  296 (361)
                      .+ .+.+++.+    .++ ..++.+
T Consensus        74 ~~-~~~~~~~l~~~~~~~-~~Iv~~   96 (167)
T d1ks9a2          74 WQ-VSDAVKSLASTLPVT-TPILLI   96 (167)
T ss_dssp             GG-HHHHHHHHHTTSCTT-SCEEEE
T ss_pred             cc-hHHHHHhhccccCcc-cEEeec
Confidence            43 34444433    344 455554

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=94.75  E-value=0.013  Score=49.59  Aligned_cols=34  Identities=35%  Similarity=0.473  Sum_probs=30.6

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  230 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~  230 (361)
                      |++|+|+|+|+.|+.|+..++..|. +|+++++++
T Consensus         1 ~KkV~IIGaG~aGL~aA~~La~~G~-~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGAGVSGLAAAYKLKIHGL-NVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTSC-EEEEECSSS
T ss_pred             CCEEEEECcCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence            5789999999999999999999999 899998754

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=94.73  E-value=0.036  Score=40.73  Aligned_cols=43  Identities=21%  Similarity=0.186  Sum_probs=36.5

Q ss_pred             hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChh
Q 018072          188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK  231 (361)
Q Consensus       188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~  231 (361)
                      .+.....++.+|+|+|+|.+|+-.++.++..|. .|..+.+.+.
T Consensus        14 ~~~l~~~~~~~vvVvGgG~ig~E~A~~l~~~g~-~vt~i~~~~~   56 (121)
T d1mo9a2          14 VEELDYEPGSTVVVVGGSKTAVEYGCFFNATGR-RTVMLVRTEP   56 (121)
T ss_dssp             HHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCT
T ss_pred             HHHHhhCCCCEEEEECCCHHHHHHHHHHHhcch-hheEeeccch
Confidence            445567789999999999999999999999998 8888877653

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.73  E-value=0.053  Score=41.74  Aligned_cols=84  Identities=15%  Similarity=0.178  Sum_probs=60.6

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA-KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  276 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~-~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~  276 (361)
                      +|.++|+|.+|.+.+.-....|. ++++.+++.++.+.+ +++|....    . +  ..+.+.     ..|+||-++- |
T Consensus         2 kIg~IG~G~mG~al~~~l~~~~~-~i~v~~r~~~~~~~l~~~~g~~~~----~-~--~~~~~~-----~~dvIilavk-p   67 (152)
T d2ahra2           2 KIGIIGVGKMASAIIKGLKQTPH-ELIISGSSLERSKEIAEQLALPYA----M-S--HQDLID-----QVDLVILGIK-P   67 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHTTSSC-EEEEECSSHHHHHHHHHHHTCCBC----S-S--HHHHHH-----TCSEEEECSC-G
T ss_pred             EEEEEeccHHHHHHHHHHHhCCC-eEEEEcChHHhHHhhccccceeee----c-h--hhhhhh-----ccceeeeecc-h
Confidence            57899999999987776666676 899999999887776 56776432    1 1  322322     4799999995 4


Q ss_pred             HHHHHHHHHhcCCCcEEEEE
Q 018072          277 DNMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       277 ~~~~~~~~~l~~~~G~iv~~  296 (361)
                      +.+...++.+.++ ..++.+
T Consensus        68 ~~~~~vl~~l~~~-~~iis~   86 (152)
T d2ahra2          68 QLFETVLKPLHFK-QPIISM   86 (152)
T ss_dssp             GGHHHHHTTSCCC-SCEEEC
T ss_pred             HhHHHHhhhcccc-eeEecc
Confidence            7778888888876 666644

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.65  E-value=0.031  Score=44.90  Aligned_cols=101  Identities=12%  Similarity=0.130  Sum_probs=63.4

Q ss_pred             hhhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCE-EEcCCCCCccHHHHHHHH
Q 018072          187 TLNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FVNTSEHDRPIQEVIAEM  261 (361)
Q Consensus       187 ~~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~-vv~~~~~~~~~~~~i~~~  261 (361)
                      +.+...+.++++||=+|+|. |..++.+++ .+. +|+++|.++...+.+++    .+... .+.....+  +.   ..+
T Consensus        44 Li~~l~~~~~~~VLDiGcG~-G~~~~~la~-~~~-~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d--~~---~~~  115 (194)
T d1dusa_          44 LVENVVVDKDDDILDLGCGY-GVIGIALAD-EVK-STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSD--LY---ENV  115 (194)
T ss_dssp             HHHHCCCCTTCEEEEETCTT-SHHHHHHGG-GSS-EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECS--TT---TTC
T ss_pred             HHHhCCcCCCCeEEEEeecC-ChhHHHHHh-hcc-ccceeeeccccchhHHHHHHHhCCccceEEEEEcc--hh---hhh
Confidence            45667788999999998865 555666665 344 89999999988888764    33321 01111111  10   112


Q ss_pred             cCCCccEEEEccC---Ch----HHHHHHHHHhcCCCcEEEEE
Q 018072          262 TNGGVDRSVECTG---NI----DNMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       262 ~~~g~Dvvid~~g---~~----~~~~~~~~~l~~~~G~iv~~  296 (361)
                      .++.||+|+-...   +.    ..+..+.+.|+++ |+++++
T Consensus       116 ~~~~fD~Ii~~~p~~~~~~~~~~~l~~~~~~Lkpg-G~l~i~  156 (194)
T d1dusa_         116 KDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDN-GEIWVV  156 (194)
T ss_dssp             TTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEE-EEEEEE
T ss_pred             ccCCceEEEEcccEEecchhhhhHHHHHHHhcCcC-cEEEEE
Confidence            2347999997432   22    2467788899997 987654

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=94.63  E-value=0.05  Score=45.81  Aligned_cols=80  Identities=15%  Similarity=0.249  Sum_probs=51.9

Q ss_pred             CCCCEEEEEcC-C--HHHHHHHHHHHHcCCCeEEEEcCChhhHHH-H-HHcCCCE---EEcCCCCC--ccHHHHHHHHcC
Q 018072          194 ERGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSKRFEE-A-KKFGVTD---FVNTSEHD--RPIQEVIAEMTN  263 (361)
Q Consensus       194 ~~g~~VlI~G~-g--~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~-~-~~~G~~~---vv~~~~~~--~~~~~~i~~~~~  263 (361)
                      =.|.++||+|+ |  ++|.+.++.+...|+ +|+.++++++++.. + ++++...   ..|..+.+  .+..+.+.+...
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga-~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~   82 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIG   82 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccc
Confidence            46889999985 4  699999998999999 89999888876532 3 3455432   22222211  123333443332


Q ss_pred             C--CccEEEEccC
Q 018072          264 G--GVDRSVECTG  274 (361)
Q Consensus       264 ~--g~Dvvid~~g  274 (361)
                      .  ..|+++++.|
T Consensus        83 ~~~~ld~~i~~ag   95 (268)
T d2h7ma1          83 AGNKLDGVVHSIG   95 (268)
T ss_dssp             TTCCEEEEEECCC
T ss_pred             cCCCcceeeeccc
Confidence            2  6899999987

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=94.59  E-value=0.12  Score=40.56  Aligned_cols=101  Identities=22%  Similarity=0.258  Sum_probs=63.1

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEE-cCC-hhhHHHHHHcCCCEEEcCCCCCccHHH-------HHHHHcCCCccE
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGV-DRS-SKRFEEAKKFGVTDFVNTSEHDRPIQE-------VIAEMTNGGVDR  268 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~-~~~-~~~~~~~~~~G~~~vv~~~~~~~~~~~-------~i~~~~~~g~Dv  268 (361)
                      +|.|.|-|-+|...++++...+--.++++ +.+ ......+..++.+......+....+.+       ...++. .++|+
T Consensus         3 ~VgINGfGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~-~~vDv   81 (171)
T d1cf2o1           3 AVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDML-DEADI   81 (171)
T ss_dssp             EEEEECCSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHH-HTCSE
T ss_pred             EEEEEcCcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhh-cCCCE
Confidence            68899999999999997766552245554 333 244456666676554332221100100       001111 26899


Q ss_pred             EEEccCChHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072          269 SVECTGNIDNMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       269 vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      |+||+|.-...+.+-..+..+ -+.++.+...
T Consensus        82 ViEcTG~f~~~~~~~~hl~~G-~K~vi~~~~~  112 (171)
T d1cf2o1          82 VIDCTPEGIGAKNLKMYKEKG-IKAIFQGGEK  112 (171)
T ss_dssp             EEECCSTTHHHHHHHHHHHTT-CEEEECTTSC
T ss_pred             EEEccCCCCCHHHHHHHHHcC-CCEEEECCCC
Confidence            999999988888888889886 7877776544

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=94.52  E-value=0.084  Score=44.19  Aligned_cols=35  Identities=20%  Similarity=0.187  Sum_probs=29.9

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhH
Q 018072          198 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRF  233 (361)
Q Consensus       198 ~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~  233 (361)
                      +.||+|+ +++|.+.+..+...|+ +|+.++++.++.
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~-~Vvi~~r~~~~~   38 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEGA   38 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchHH
Confidence            4678888 8999999999999999 899999886543

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.43  E-value=0.33  Score=36.28  Aligned_cols=75  Identities=23%  Similarity=0.395  Sum_probs=42.6

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 018072          198 SVAVFGL-GAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  275 (361)
Q Consensus       198 ~VlI~G~-g~vG~~a~~~a~~~-g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~  275 (361)
                      +|.|.|+ |-+|...++..... +.+-+-++++.+ ....                         ....++|++||.+..
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~-~~~~-------------------------~~~~~~DvvIDFS~p   54 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGD-PLSL-------------------------LTDGNTEVVIDFTHP   54 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTC-CTHH-------------------------HHTTTCSEEEECCCT
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC-chhh-------------------------hccccCCEEEEcccH
Confidence            5889997 99999988877665 453333343321 1111                         112356777777755


Q ss_pred             hHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072          276 IDNMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       276 ~~~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                       +.....++.+... |.=+.+|.++
T Consensus        55 -~~~~~~~~~~~~~-~~~~ViGTTG   77 (135)
T d1yl7a1          55 -DVVMGNLEFLIDN-GIHAVVGTTG   77 (135)
T ss_dssp             -TTHHHHHHHHHHT-TCEEEECCCC
T ss_pred             -HHHHHHHHHHHhc-CCCEEEeccc
Confidence             4444444444444 5555666555

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=94.43  E-value=0.17  Score=35.06  Aligned_cols=66  Identities=21%  Similarity=0.335  Sum_probs=48.8

Q ss_pred             EEEEEcCCHHHHHH-HHHHHHcCCCeEEEEcCCh-hhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCC
Q 018072          198 SVAVFGLGAVGLAA-AEGARIAGASRIIGVDRSS-KRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGN  275 (361)
Q Consensus       198 ~VlI~G~g~vG~~a-~~~a~~~g~~~Vi~~~~~~-~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~  275 (361)
                      +|-++|-|++|..+ +++++..|. .|.+.|..+ +..+.++++|+.........+  +         .+.|+|+-+.+-
T Consensus         3 ~ihfiGIgG~GMs~LA~~L~~~G~-~VsGSD~~~~~~t~~L~~~Gi~i~~gh~~~~--i---------~~~d~vV~SsAI   70 (89)
T d1j6ua1           3 KIHFVGIGGIGMSAVALHEFSNGN-DVYGSNIEETERTAYLRKLGIPIFVPHSADN--W---------YDPDLVIKTPAV   70 (89)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHTTCCEESSCCTTS--C---------CCCSEEEECTTC
T ss_pred             EEEEEeECHHHHHHHHHHHHhCCC-eEEEEeCCCChhHHHHHHCCCeEEeeecccc--c---------CCCCEEEEecCc
Confidence            57778998889865 688999999 999999887 566778899987654333322  1         257899887664

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=94.42  E-value=0.034  Score=48.79  Aligned_cols=46  Identities=28%  Similarity=0.314  Sum_probs=38.7

Q ss_pred             cCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 018072          191 AKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK  237 (361)
Q Consensus       191 ~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~  237 (361)
                      .-+++|.+|||+|+ |.+|...+..+...|. .|+++.++.++.+.++
T Consensus         6 ~~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~-~V~~~vR~~~~~~~~~   52 (342)
T d1y1pa1           6 AVLPEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQ   52 (342)
T ss_dssp             CSSCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHH
T ss_pred             CCCCCcCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCchhHHHHH
Confidence            44688999999998 9999999988888898 8999888887766554

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=94.40  E-value=0.066  Score=44.24  Aligned_cols=103  Identities=18%  Similarity=0.174  Sum_probs=69.9

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHH----
Q 018072          191 AKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEM----  261 (361)
Q Consensus       191 ~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~----  261 (361)
                      .+.....+||-+|.+. |+.++.+|++++. .+|+.++.+++..+.+++    .|....+.....+  ..+.+.++    
T Consensus        55 ~~~~~~k~iLEiGT~~-GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~g~--a~~~L~~l~~~~  131 (227)
T d1susa1          55 LKLINAKNTMEIGVYT-GYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGP--ALPVLDEMIKDE  131 (227)
T ss_dssp             HHHHTCCEEEEECCGG-GHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESC--HHHHHHHHHHCG
T ss_pred             HHhcCCCcEEEecchh-hhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeeehH--HHHHHHHHHhcc
Confidence            3345567899998743 7777788887742 399999999998877754    5765433333333  44455444    


Q ss_pred             -cCCCccEEEEccCCh---HHHHHHHHHhcCCCcEEEEEc
Q 018072          262 -TNGGVDRSVECTGNI---DNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       262 -~~~g~Dvvid~~g~~---~~~~~~~~~l~~~~G~iv~~g  297 (361)
                       ..+.||.||--....   ..++.+++.|+++ |.++.=.
T Consensus       132 ~~~~~fD~iFiDa~k~~y~~~~e~~~~ll~~g-Giii~DN  170 (227)
T d1susa1         132 KNHGSYDFIFVDADKDNYLNYHKRLIDLVKVG-GVIGYDN  170 (227)
T ss_dssp             GGTTCBSEEEECSCSTTHHHHHHHHHHHBCTT-CCEEEET
T ss_pred             ccCCceeEEEeccchhhhHHHHHHHHhhcCCC-cEEEEcc
Confidence             234799999765543   3577999999997 8877654

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=94.36  E-value=0.14  Score=44.18  Aligned_cols=100  Identities=14%  Similarity=0.073  Sum_probs=65.4

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC--EEEcC-----CCCCccHHHHHHHHcCCCc
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT--DFVNT-----SEHDRPIQEVIAEMTNGGV  266 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~--~vv~~-----~~~~~~~~~~i~~~~~~g~  266 (361)
                      ....+|||+|+|. |..+-.+++..+..+|.+++.+++-.+.++++-..  ...+.     .-.|  ..+.++. ++..|
T Consensus       105 ~~pk~VLIiGgG~-G~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i~D--a~~~l~~-~~~~y  180 (312)
T d2b2ca1         105 PDPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGD--GFEFLKN-HKNEF  180 (312)
T ss_dssp             SSCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSC--HHHHHHH-CTTCE
T ss_pred             CCCCeEEEeCCCc-hHHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEEch--HHHHHHh-CCCCC
Confidence            3457899998865 44555677766666999999999999999885321  00000     1112  4455654 44589


Q ss_pred             cEEEEccCC----------hHHHHHHHHHhcCCCcEEEEEcC
Q 018072          267 DRSVECTGN----------IDNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       267 Dvvid~~g~----------~~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      |+||--+..          .+.++.+.+.|+++ |.++.-+.
T Consensus       181 DvII~D~~dp~~~~~~L~t~eFy~~~~~~L~~~-Gi~v~q~~  221 (312)
T d2b2ca1         181 DVIITDSSDPVGPAESLFGQSYYELLRDALKED-GILSSQGE  221 (312)
T ss_dssp             EEEEECCC-------------HHHHHHHHEEEE-EEEEEECC
T ss_pred             CEEEEcCCCCCCcchhhhhHHHHHHHHhhcCCC-cEEEEecC
Confidence            999964322          23467888899998 99887754

>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Bacillus subtilis [TaxId: 1423]

Probab=94.33  E-value=0.034  Score=47.49  Aligned_cols=98  Identities=19%  Similarity=0.088  Sum_probs=66.1

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcC-----C--C--EEEcCCCCCccHHHHHHHHcCC
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG-----V--T--DFVNTSEHDRPIQEVIAEMTNG  264 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G-----~--~--~vv~~~~~~~~~~~~i~~~~~~  264 (361)
                      ....+|||+|+|. |..+..+++..+..+|.+++.+++-.+.++++-     +  +  .-+...+    ..+.++. ++.
T Consensus        74 ~~p~~vLiiGgG~-G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~~D----~~~~l~~-~~~  147 (274)
T d1iy9a_          74 PNPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDD----GFMHIAK-SEN  147 (274)
T ss_dssp             SSCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESC----SHHHHHT-CCS
T ss_pred             CCcceEEecCCCC-cHHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEech----HHHHHhh-cCC
Confidence            4557999998765 556666777777779999999999988887742     2  1  1111111    3334443 334


Q ss_pred             CccEEEEccC----------ChHHHHHHHHHhcCCCcEEEEEcC
Q 018072          265 GVDRSVECTG----------NIDNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       265 g~Dvvid~~g----------~~~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      .+|+|+--..          +.+.++.+.+.|+++ |.++.-..
T Consensus       148 ~yDvIi~D~~~p~~~~~~L~t~eFy~~~~~~L~~~-Gv~v~q~~  190 (274)
T d1iy9a_         148 QYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKED-GIFVAQTD  190 (274)
T ss_dssp             CEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEE-EEEEEECC
T ss_pred             CCCEEEEcCCCCCCcchhhccHHHHHHHHhhcCCC-ceEEEecC
Confidence            8999975332          334688999999998 99887653

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=94.23  E-value=0.053  Score=47.28  Aligned_cols=100  Identities=18%  Similarity=0.174  Sum_probs=63.4

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHc--CCCcc
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT--NGGVD  267 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~--~~g~D  267 (361)
                      .+|++||=+++|. |..++.+|+  |+..|+++|.+++.++.+++    .|.+.+-. ...+  ..+.++.+.  ++.||
T Consensus       144 ~~g~rVLDl~~gt-G~~s~~~a~--g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~-i~~d--~~~~~~~~~~~~~~fD  217 (318)
T d1wxxa2         144 FRGERALDVFSYA-GGFALHLAL--GFREVVAVDSSAEALRRAEENARLNGLGNVRV-LEAN--AFDLLRRLEKEGERFD  217 (318)
T ss_dssp             CCEEEEEEETCTT-THHHHHHHH--HEEEEEEEESCHHHHHHHHHHHHHTTCTTEEE-EESC--HHHHHHHHHHTTCCEE
T ss_pred             hCCCeeeccCCCC-cHHHHHHHh--cCCcEEeecchHHHHHHHHHHHHHcCCCCcce-eecc--HHHHhhhhHhhhcCCC
Confidence            4689999887644 334445554  33489999999999888864    56543211 1222  344444432  23799


Q ss_pred             EEEEccCC---------------hHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072          268 RSVECTGN---------------IDNMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       268 vvid~~g~---------------~~~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      +|+--...               .+.+..+++.|+++ |.++.+....
T Consensus       218 ~Vi~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpG-G~Lv~~scs~  264 (318)
T d1wxxa2         218 LVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEG-GILATASCSH  264 (318)
T ss_dssp             EEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEE-EEEEEEECCT
T ss_pred             EEEEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCC-CEEEEEeCCc
Confidence            99864321               12456788889997 9999887654

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.16  E-value=0.013  Score=50.61  Aligned_cols=99  Identities=17%  Similarity=0.153  Sum_probs=62.3

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc----CCCEEEc---CCCCCccHHHHHHHHcC
Q 018072          191 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF----GVTDFVN---TSEHDRPIQEVIAEMTN  263 (361)
Q Consensus       191 ~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~----G~~~vv~---~~~~~~~~~~~i~~~~~  263 (361)
                      .+.+++.+||=+|+|. |..+..+|+. |. +|+++|.+++-++.+++.    +......   ....+  +...-..+..
T Consensus        52 l~~~~~~~vLD~GcG~-G~~~~~la~~-g~-~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  126 (292)
T d1xvaa_          52 LRQHGCHRVLDVACGT-GVDSIMLVEE-GF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEAN--WLTLDKDVPA  126 (292)
T ss_dssp             HHHTTCCEEEESSCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECC--GGGHHHHSCC
T ss_pred             hhhcCCCEEEEecCCC-cHHHHHHHHc-CC-eeeeccCchHHHHHHHHHHHhcccccccceeeeeecc--ccccccccCC
Confidence            3446678999999876 7778888765 87 899999999988877542    2211000   00111  1111122232


Q ss_pred             -CCccEEEEccCC--------------hHHHHHHHHHhcCCCcEEEE
Q 018072          264 -GGVDRSVECTGN--------------IDNMISAFECVHDGWGVAVL  295 (361)
Q Consensus       264 -~g~Dvvid~~g~--------------~~~~~~~~~~l~~~~G~iv~  295 (361)
                       +.+|+|+.....              ...+..+.+.|+++ |++++
T Consensus       127 ~~~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~li~  172 (292)
T d1xvaa_         127 GDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPG-GLLVI  172 (292)
T ss_dssp             TTCEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEE-EEEEE
T ss_pred             CCCceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcC-cEEEE
Confidence             379999864321              12678889999997 99876

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=94.11  E-value=0.034  Score=40.56  Aligned_cols=38  Identities=26%  Similarity=0.418  Sum_probs=32.9

Q ss_pred             CCCC-CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChh
Q 018072          193 PERG-SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK  231 (361)
Q Consensus       193 ~~~g-~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~  231 (361)
                      +.++ .+|.|+|+|-+|.+.++.|+.+|. ++++.|.+++
T Consensus         7 ~~~~~~kigIlGgGQL~rMla~aA~~lG~-~v~v~d~~~~   45 (111)
T d1kjqa2           7 LRPAATRVMLLGSGELGKEVAIECQRLGV-EVIAVDRYAD   45 (111)
T ss_dssp             TSTTCCEEEEESCSHHHHHHHHHHHTTTC-EEEEEESSTT
T ss_pred             CCCCCCEEEEEeCCHHHHHHHHHHHHCCC-EEEEEcCCCC
Confidence            3444 569999999999999999999999 8999988765

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.01  E-value=0.087  Score=45.08  Aligned_cols=98  Identities=14%  Similarity=0.146  Sum_probs=64.4

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCC---------CEEEcCCCCCccHHHHHHHHcCC
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV---------TDFVNTSEHDRPIQEVIAEMTNG  264 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~---------~~vv~~~~~~~~~~~~i~~~~~~  264 (361)
                      ...++|||+|+|. |..+-.+++..+..+|++++.+++-.+.++++-.         ..-+...  |  ..+.++. +.+
T Consensus        77 ~~pk~vLiiGgG~-G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~~--D--a~~~l~~-~~~  150 (285)
T d2o07a1          77 PNPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVG--D--GFEFMKQ-NQD  150 (285)
T ss_dssp             SSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEES--C--HHHHHHT-CSS
T ss_pred             cCcCeEEEeCCCc-hHHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEEc--c--HHHHHhc-CCC
Confidence            4457999998765 4555566776667799999999999998877421         1111111  2  3445543 334


Q ss_pred             CccEEEEccCC----------hHHHHHHHHHhcCCCcEEEEEcC
Q 018072          265 GVDRSVECTGN----------IDNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       265 g~Dvvid~~g~----------~~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      .||+||--...          .+.++.+-+.|+++ |.++.-..
T Consensus       151 ~yDvIi~D~~~p~~~~~~L~t~eF~~~~~~~L~~~-Gi~v~q~~  193 (285)
T d2o07a1         151 AFDVIITDSSDPMGPAESLFKESYYQLMKTALKED-GVLCCQGE  193 (285)
T ss_dssp             CEEEEEEECC-----------CHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             CCCEEEEcCCCCCCcccccccHHHHHHHHHhcCCC-CeEEEecc
Confidence            89999854322          23467888899998 99887643

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=93.96  E-value=0.035  Score=45.93  Aligned_cols=39  Identities=26%  Similarity=0.284  Sum_probs=34.1

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChh
Q 018072          192 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK  231 (361)
Q Consensus       192 ~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~  231 (361)
                      ..+.+.+|+|+|+|+.|+.++..++..|. .|+.++.+++
T Consensus        45 ~~~~~k~VvIIGaGpAGl~aA~~l~~~G~-~v~l~E~~~~   83 (233)
T d1djqa3          45 QTKNKDSVLIVGAGPSGSEAARVLMESGY-TVHLTDTAEK   83 (233)
T ss_dssp             CCSSCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred             cccCCceEEEEcccHHHHHHHHHHHHhcc-ceeeEeeccc
Confidence            34678999999999999999999999999 8999987653

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=93.95  E-value=0.067  Score=46.67  Aligned_cols=72  Identities=17%  Similarity=0.190  Sum_probs=44.4

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcC----ChhhHHHHHH---cCCCEEEcCCCCCccHHHHHHHHcC-CCccE
Q 018072          198 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDR----SSKRFEEAKK---FGVTDFVNTSEHDRPIQEVIAEMTN-GGVDR  268 (361)
Q Consensus       198 ~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~----~~~~~~~~~~---~G~~~vv~~~~~~~~~~~~i~~~~~-~g~Dv  268 (361)
                      +|||+|+ |.+|...+..+...|. .|+++++    ........+.   -++..+ ..+-.+  . +.+.+... .++|+
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~d--~-~~l~~~~~~~~~d~   76 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGH-DVIILDNLCNSKRSVLPVIERLGGKHPTFV-EGDIRN--E-ALMTEILHDHAIDT   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCTTHHHHHHHHHTSCCEEE-ECCTTC--H-HHHHHHHHHTTCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcchhhHHHHHhhcCCCCEEE-EeecCC--H-HHHHHHHhccCCCE
Confidence            6999998 9999999999999998 8998864    2222333222   233322 222222  2 23333222 37999


Q ss_pred             EEEccC
Q 018072          269 SVECTG  274 (361)
Q Consensus       269 vid~~g  274 (361)
                      ||++++
T Consensus        77 ViHlAa   82 (338)
T d1udca_          77 VIHFAG   82 (338)
T ss_dssp             EEECCS
T ss_pred             EEECCC
Confidence            999875

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=93.92  E-value=0.076  Score=41.83  Aligned_cols=43  Identities=28%  Similarity=0.340  Sum_probs=37.6

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCC
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV  241 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~  241 (361)
                      +|-|+|.|.+|...+.-+...|. +|++.++++++.+.+.+.+.
T Consensus         3 kIGvIGlG~MG~~ma~~L~~~G~-~V~~~dr~~~~~~~l~~~~~   45 (178)
T d1pgja2           3 DVGVVGLGVMGANLALNIAEKGF-KVAVFNRTYSKSEEFMKANA   45 (178)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHTT
T ss_pred             EEEEEeehHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCC
Confidence            47789999999998888888898 89999999999998876554

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.88  E-value=0.098  Score=39.94  Aligned_cols=41  Identities=17%  Similarity=0.229  Sum_probs=32.3

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcC--ChhhHHHH
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR--SSKRFEEA  236 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~--~~~~~~~~  236 (361)
                      .|.+|||+|+|.+|.--+..+...|+ +|++++.  +++-..++
T Consensus        12 ~gkrvLViGgG~va~~ka~~Ll~~GA-~VtVvap~~~~~l~~~~   54 (150)
T d1kyqa1          12 KDKRILLIGGGEVGLTRLYKLMPTGC-KLTLVSPDLHKSIIPKF   54 (150)
T ss_dssp             TTCEEEEEEESHHHHHHHHHHGGGTC-EEEEEEEEECTTHHHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCCHHHHHHH
Confidence            57899999999999999999999999 7877743  34444443

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.87  E-value=0.059  Score=39.83  Aligned_cols=42  Identities=26%  Similarity=0.365  Sum_probs=34.6

Q ss_pred             hhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChh
Q 018072          189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK  231 (361)
Q Consensus       189 ~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~  231 (361)
                      +...-+.+.+|+|+|+|.+|+-+++.+..+|. +|+.+++.+.
T Consensus        23 ~~~~~~~~k~vvViGgG~iG~E~A~~l~~~g~-~Vtlie~~~~   64 (123)
T d1nhpa2          23 QKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGK-KVTVIDILDR   64 (123)
T ss_dssp             HHHTCTTCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred             HHhhccCCCEEEEECChHHHHHHHHHhhccce-EEEEEEecCc
Confidence            33344567899999999999999999999999 8999977653

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=93.86  E-value=0.074  Score=45.01  Aligned_cols=95  Identities=17%  Similarity=0.132  Sum_probs=65.8

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEE-EcCCCCCccHHHHHHHHcCCCccEEEE
Q 018072          193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVE  271 (361)
Q Consensus       193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~v-v~~~~~~~~~~~~i~~~~~~g~Dvvid  271 (361)
                      ..++.+||=+|+|. |..+..+++...-.+++++|.+++.++.+++...... +.-+..+.       .+.++.+|+|+.
T Consensus        82 ~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~d~~~l-------~~~~~sfD~v~~  153 (268)
T d1p91a_          82 DDKATAVLDIGCGE-GYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRL-------PFSDTSMDAIIR  153 (268)
T ss_dssp             CTTCCEEEEETCTT-STTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSC-------SBCTTCEEEEEE
T ss_pred             CCCCCEEEEeCCCC-cHHHHHHHHHCCCCEEEEecchHhhhhhhhcccccccceeeehhhc-------cCCCCCEEEEee
Confidence            46778999999876 6777777776633389999999999999877543322 21111110       122347999997


Q ss_pred             ccCChHHHHHHHHHhcCCCcEEEEEc
Q 018072          272 CTGNIDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       272 ~~g~~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      .-. +..++...+.|+++ |.++...
T Consensus       154 ~~~-~~~~~e~~rvLkpg-G~l~~~~  177 (268)
T d1p91a_         154 IYA-PCKAEELARVVKPG-GWVITAT  177 (268)
T ss_dssp             ESC-CCCHHHHHHHEEEE-EEEEEEE
T ss_pred             cCC-HHHHHHHHHHhCCC-cEEEEEe
Confidence            544 46788899999997 9988774

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.84  E-value=0.021  Score=49.85  Aligned_cols=94  Identities=18%  Similarity=0.183  Sum_probs=54.7

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhH---HHHHHcCCCE---EEcCCCCCccHHHHHHHHcCC
Q 018072          191 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRF---EEAKKFGVTD---FVNTSEHDRPIQEVIAEMTNG  264 (361)
Q Consensus       191 ~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~---~~~~~~G~~~---vv~~~~~~~~~~~~i~~~~~~  264 (361)
                      ..+.+|++||-+|+|. |.+++.+|+ .|+.+|++++.++.-.   +.+++.+...   ++.....+  +     .+..+
T Consensus        29 ~~~~~~~~VLDiGcG~-G~ls~~aa~-~Ga~~V~avd~s~~~~~a~~~~~~n~~~~~v~~~~~~~~~--~-----~~~~~   99 (316)
T d1oria_          29 RHLFKDKVVLDVGSGT-GILCMFAAK-AGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEE--V-----ELPVE   99 (316)
T ss_dssp             HHHHTTCEEEEETCTT-SHHHHHHHH-TTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTT--C-----CCSSS
T ss_pred             cccCCcCEEEEEecCC-cHHHHHHHH-hCCCEEEEEcCcHHHhhhhhHHHHhCCccccceEeccHHH--c-----ccccc
Confidence            3456899999999875 666665555 6877999999886422   2223344432   22222221  1     01123


Q ss_pred             CccEEEEccC-----C----hHHHHHHHHHhcCCCcEEE
Q 018072          265 GVDRSVECTG-----N----IDNMISAFECVHDGWGVAV  294 (361)
Q Consensus       265 g~Dvvid~~g-----~----~~~~~~~~~~l~~~~G~iv  294 (361)
                      .+|+|+...-     .    +..+...-+.|+++ |+++
T Consensus       100 ~~D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~-G~ii  137 (316)
T d1oria_         100 KVDIIISEWMGYCLFYESMLNTVLHARDKWLAPD-GLIF  137 (316)
T ss_dssp             CEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEE-EEEE
T ss_pred             eeEEEeeeeeeeeeccHHHHHHHHHHHHhcCCCC-eEEE
Confidence            7899976321     1    12344556789997 8764

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=93.77  E-value=0.094  Score=41.93  Aligned_cols=83  Identities=14%  Similarity=0.106  Sum_probs=54.9

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEE----EcCCCC---CccHHHHHHHHcCCCccEEE
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDF----VNTSEH---DRPIQEVIAEMTNGGVDRSV  270 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~v----v~~~~~---~~~~~~~i~~~~~~g~Dvvi  270 (361)
                      +|.|+|+|..|.+.+.++...|. .|..++++++..+.+.+-+....    +.....   ..++.+.+     .+.|++|
T Consensus         9 KI~ViGaG~wGtAlA~~La~~g~-~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~t~~l~~a~-----~~ad~ii   82 (189)
T d1n1ea2           9 KAVVFGSGAFGTALAMVLSKKCR-EVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAY-----NGAEIIL   82 (189)
T ss_dssp             EEEEECCSHHHHHHHHHHHTTEE-EEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHH-----TTCSCEE
T ss_pred             eEEEECCCHHHHHHHHHHHHcCC-eEEEEEecHHHHHHHhhcccccccccccccccccccchhhhhcc-----CCCCEEE
Confidence            69999999999998888877776 89999999998888765332110    000000   01133222     2579999


Q ss_pred             EccCChHHHHHHHHHhc
Q 018072          271 ECTGNIDNMISAFECVH  287 (361)
Q Consensus       271 d~~g~~~~~~~~~~~l~  287 (361)
                      -++.+ ..+...++.+.
T Consensus        83 iavPs-~~~~~~~~~~~   98 (189)
T d1n1ea2          83 FVIPT-QFLRGFFEKSG   98 (189)
T ss_dssp             ECSCH-HHHHHHHHHHC
T ss_pred             EcCcH-HHHHHHHHHHH
Confidence            99987 56666665543

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=93.69  E-value=0.36  Score=36.61  Aligned_cols=95  Identities=9%  Similarity=0.025  Sum_probs=59.5

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhH----HHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEE
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRF----EEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  271 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~----~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid  271 (361)
                      -+.++|+|.|.+|...++.+...|. .|++++.++++.    +.+...|...+. -+..+   .+.++...-+.+|.++-
T Consensus         3 knHiII~G~g~~g~~l~~~L~~~~~-~v~vId~d~~~~~~~~~~~~~~~~~vi~-Gd~~d---~~~L~~a~i~~a~~vi~   77 (153)
T d1id1a_           3 KDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGDNADVIP-GDSND---SSVLKKAGIDRCRAILA   77 (153)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCTTCEEEE-SCTTS---HHHHHHHTTTTCSEEEE
T ss_pred             CCEEEEECCCHHHHHHHHHHHHcCC-CEEEEeccchhHHHHHHHhhcCCcEEEE-ccCcc---hHHHHHhccccCCEEEE
Confidence            3579999999999999999999998 788888887643    222334554433 22222   23444443347899999


Q ss_pred             ccCChHHHH---HHHHHhcCCCcEEEEE
Q 018072          272 CTGNIDNMI---SAFECVHDGWGVAVLV  296 (361)
Q Consensus       272 ~~g~~~~~~---~~~~~l~~~~G~iv~~  296 (361)
                      ++++...-.   ...+.+.+. -+++.-
T Consensus        78 ~~~~d~~n~~~~~~~r~~~~~-~~iia~  104 (153)
T d1id1a_          78 LSDNDADNAFVVLSAKDMSSD-VKTVLA  104 (153)
T ss_dssp             CSSCHHHHHHHHHHHHHHTSS-SCEEEE
T ss_pred             ccccHHHHHHHHHHHHHhCCC-CceEEE
Confidence            998754322   333345454 454443

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=93.69  E-value=0.037  Score=47.50  Aligned_cols=38  Identities=26%  Similarity=0.317  Sum_probs=32.7

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 018072          192 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  230 (361)
Q Consensus       192 ~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~  230 (361)
                      ......+|+|+|+|+.|+.++..+...|. +|++++.++
T Consensus        26 ~~~~pkkV~IIGaG~aGLsaA~~L~~~G~-~V~vlE~~~   63 (370)
T d2iida1          26 ATSNPKHVVIVGAGMAGLSAAYVLAGAGH-QVTVLEASE   63 (370)
T ss_dssp             CCSSCCEEEEECCBHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            34556799999999999999998888998 899998764

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=93.69  E-value=0.069  Score=46.64  Aligned_cols=76  Identities=16%  Similarity=0.093  Sum_probs=48.4

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHH-HHHc----CCCEEEcCCCCCccHHHHHHHHcCC-Ccc
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEE-AKKF----GVTDFVNTSEHDRPIQEVIAEMTNG-GVD  267 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~-~~~~----G~~~vv~~~~~~~~~~~~i~~~~~~-g~D  267 (361)
                      .+.+|||+|+ |.+|...++.+...|. .|+++++++.+... .+..    +.. .+.-+-.+  . +.+.+.... .+|
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~i~-~~~~Dl~d--~-~~l~~~~~~~~~~   81 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLTAPTVPSLFETARVADGMQ-SEIGDIRD--Q-NKLLESIREFQPE   81 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCSSSSCHHHHTTTTTTSE-EEECCTTC--H-HHHHHHHHHHCCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCCccHHHHhhhhcccCCe-EEEeeccC--h-Hhhhhhhhhchhh
Confidence            5789999998 9999999999999999 89999887653221 1211    222 22222122  1 222222223 679


Q ss_pred             EEEEccCC
Q 018072          268 RSVECTGN  275 (361)
Q Consensus       268 vvid~~g~  275 (361)
                      +|+.+++.
T Consensus        82 ~v~~~aa~   89 (356)
T d1rkxa_          82 IVFHMAAQ   89 (356)
T ss_dssp             EEEECCSC
T ss_pred             hhhhhhcc
Confidence            99998874

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=93.68  E-value=0.057  Score=39.86  Aligned_cols=38  Identities=29%  Similarity=0.413  Sum_probs=33.8

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChh
Q 018072          193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK  231 (361)
Q Consensus       193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~  231 (361)
                      ++++.+++|+|+|.+|.-.+..++.+|. +|..+++.++
T Consensus        27 ~~~~~~vvIIGgG~iG~E~A~~l~~~g~-~Vtli~~~~~   64 (121)
T d1d7ya2          27 LRPQSRLLIVGGGVIGLELAATARTAGV-HVSLVETQPR   64 (121)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred             hhcCCeEEEECcchhHHHHHHHhhcccc-eEEEEeeccc
Confidence            4678999999999999999999999998 8999987764

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=93.68  E-value=0.083  Score=43.63  Aligned_cols=82  Identities=20%  Similarity=0.168  Sum_probs=56.7

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH-cCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEc
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK-FGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  272 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~-~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~  272 (361)
                      -.|.+|+|.|.|.+|..+++++...|+ +|++++.+..+.+.+.. .|... ++..           ++.....|+.+=|
T Consensus        37 l~g~~v~IqG~GnVG~~~a~~L~~~Ga-kvv~~d~~~~~~~~~~~~~g~~~-~~~~-----------~~~~~~cDIl~Pc  103 (230)
T d1leha1          37 LEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVAEEGADA-VAPN-----------AIYGVTCDIFAPC  103 (230)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCCEE-CCGG-----------GTTTCCCSEEEEC
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEeecccHHHHHHHHHhcCCcc-cCCc-----------ccccccccEeccc
Confidence            468999999999999999999999999 99999999888876654 55532 2111           0112257777777


Q ss_pred             cCChHHHHHHHHHhcC
Q 018072          273 TGNIDNMISAFECVHD  288 (361)
Q Consensus       273 ~g~~~~~~~~~~~l~~  288 (361)
                      .-+...-+...+.|+-
T Consensus       104 A~~~~I~~~~~~~l~a  119 (230)
T d1leha1         104 ALGAVLNDFTIPQLKA  119 (230)
T ss_dssp             SCSCCBSTTHHHHCCC
T ss_pred             ccccccChHHhhccCc
Confidence            6553333344455543

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=93.68  E-value=0.22  Score=39.59  Aligned_cols=92  Identities=15%  Similarity=0.226  Sum_probs=60.1

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEE--EcCCCCCccHHHHHHHHcCCCc
Q 018072          193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDF--VNTSEHDRPIQEVIAEMTNGGV  266 (361)
Q Consensus       193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~v--v~~~~~~~~~~~~i~~~~~~g~  266 (361)
                      +++| +||=+|+| .|..+..+++ .|. +|+++|.+++.++.+++    .+.+.+  ...+-.+  +      ..++.|
T Consensus        29 ~~~g-rvLDiGcG-~G~~~~~la~-~g~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~--~------~~~~~f   96 (198)
T d2i6ga1          29 VAPG-RTLDLGCG-NGRNSLYLAA-NGY-DVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNT--L------TFDGEY   96 (198)
T ss_dssp             SCSC-EEEEETCT-TSHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTT--C------CCCCCE
T ss_pred             CCCC-cEEEECCC-CCHHHHHHHH-Hhh-hhccccCcHHHHHHHHHHhhhccccchhhhheeccc--c------cccccc
Confidence            4555 89999997 5888777775 477 89999999988877643    455422  1111111  0      012379


Q ss_pred             cEEEEcc-----CC---hHHHHHHHHHhcCCCcEEEEEc
Q 018072          267 DRSVECT-----GN---IDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       267 Dvvid~~-----g~---~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      |+|+...     ..   ...+..+.+.|+++ |.+++..
T Consensus        97 D~I~~~~~~~~~~~~~~~~~l~~~~~~L~pg-G~~~~~~  134 (198)
T d2i6ga1          97 DFILSTVVMMFLEAQTIPGLIANMQRCTKPG-GYNLIVA  134 (198)
T ss_dssp             EEEEEESCGGGSCTTHHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             cEEEEeeeeecCCHHHHHHHHHHHHHHcCCC-cEEEEEE
Confidence            9998633     11   13567788889997 9988764

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.67  E-value=0.053  Score=39.62  Aligned_cols=36  Identities=17%  Similarity=0.279  Sum_probs=31.7

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChh
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK  231 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~  231 (361)
                      ...+++|+|+|.+|+-+++.+..+|. +|+.+++.++
T Consensus        21 ~p~~v~IiGgG~ig~E~A~~l~~~G~-~Vtlve~~~~   56 (117)
T d1ebda2          21 VPKSLVVIGGGYIGIELGTAYANFGT-KVTILEGAGE   56 (117)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred             cCCeEEEECCCccceeeeeeeccccc-EEEEEEecce
Confidence            34789999999999999999999998 8999877654

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.67  E-value=0.05  Score=48.57  Aligned_cols=31  Identities=35%  Similarity=0.321  Sum_probs=27.7

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEc
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVD  227 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~  227 (361)
                      |.+|||+|+ |.+|...+..+...|. .|+++|
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~-~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNY-EVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEe
Confidence            689999998 9999999999999998 899986

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=93.60  E-value=0.056  Score=39.63  Aligned_cols=38  Identities=11%  Similarity=0.175  Sum_probs=32.8

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 018072          192 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  230 (361)
Q Consensus       192 ~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~  230 (361)
                      .++...+|+|+|+|.+|+-.++.+..+|. +|..+++.+
T Consensus        18 ~l~~p~~v~IiGgG~iG~E~A~~l~~~g~-~Vtlv~~~~   55 (117)
T d1onfa2          18 NIKESKKIGIVGSGYIAVELINVIKRLGI-DSYIFARGN   55 (117)
T ss_dssp             TCCCCSEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSS
T ss_pred             ccCCCCEEEEECCchHHHHHHHHHHhccc-cceeeehhc
Confidence            34556899999999999999999999998 899997764

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.60  E-value=0.17  Score=37.64  Aligned_cols=72  Identities=11%  Similarity=0.238  Sum_probs=46.5

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 018072          198 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  276 (361)
Q Consensus       198 ~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~  276 (361)
                      +|.|+|+ |-+|.+..+++...+..-+..++.+...                    .+         ..+|++||.+.. 
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~--------------------~~---------~~~DVvIDFS~p-   51 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVE--------------------EL---------DSPDVVIDFSSP-   51 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEE--------------------EC---------SCCSEEEECSCG-
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHH--------------------Hh---------ccCCEEEEecCH-
Confidence            6899997 9999999999998888444444432110                    00         146888888765 


Q ss_pred             HHHHHHHHHhcCCCcEEEEEcCCC
Q 018072          277 DNMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       277 ~~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      +.....++....+ +.=+.+|.++
T Consensus        52 ~~~~~~l~~~~~~-~~p~ViGTTG   74 (128)
T d1vm6a3          52 EALPKTVDLCKKY-RAGLVLGTTA   74 (128)
T ss_dssp             GGHHHHHHHHHHH-TCEEEECCCS
T ss_pred             HHHHHHHHHHHhc-CCCEEEEcCC
Confidence            4545555554454 5666777655

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.59  E-value=0.037  Score=46.38  Aligned_cols=34  Identities=26%  Similarity=0.395  Sum_probs=29.7

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChh
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK  231 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~  231 (361)
                      +|+|+|+|+.|++++.+++..|...|++++++++
T Consensus         3 ~V~IvGaG~aGl~~A~~L~~~Gi~~V~V~Er~~~   36 (288)
T d3c96a1           3 DILIAGAGIGGLSCALALHQAGIGKVTLLESSSE   36 (288)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence            6999999999999999999999658888887653

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=93.50  E-value=0.025  Score=43.56  Aligned_cols=84  Identities=12%  Similarity=-0.058  Sum_probs=51.8

Q ss_pred             EEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChHHH
Q 018072          200 AVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNIDNM  279 (361)
Q Consensus       200 lI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~~~  279 (361)
                      -++|+|.+|...+..++..+. .+.+..|+.++.+.+.+.+.....+..+..            ...|+||-++.. +.+
T Consensus         3 gfIG~G~mg~~l~~~L~~~~~-~~~v~~R~~~~~~~l~~~~~~~~~~~~~~~------------~~~DiVil~v~d-~~i   68 (153)
T d2i76a2           3 NFVGTGTLTRFFLECLKDRYE-IGYILSRSIDRARNLAEVYGGKAATLEKHP------------ELNGVVFVIVPD-RYI   68 (153)
T ss_dssp             EEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCCCCCSSCCCC------------C---CEEECSCT-TTH
T ss_pred             EEEeCcHHHHHHHHHHHhCCC-EEEEEeCChhhhcchhhcccccccchhhhh------------ccCcEEEEeccc-hhh
Confidence            367999999988776654332 345788999998888876654332222111            257999999976 677


Q ss_pred             HHHHHHhcCCCcEEEEEc
Q 018072          280 ISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       280 ~~~~~~l~~~~G~iv~~g  297 (361)
                      ....+.|+..+..++.++
T Consensus        69 ~~v~~~l~~~~~ivi~~s   86 (153)
T d2i76a2          69 KTVANHLNLGDAVLVHCS   86 (153)
T ss_dssp             HHHHTTTCCSSCCEEECC
T ss_pred             hHHHhhhcccceeeeecc
Confidence            777888875414445554

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=93.43  E-value=0.03  Score=46.05  Aligned_cols=33  Identities=27%  Similarity=0.446  Sum_probs=28.9

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  230 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~  230 (361)
                      +|+|+|+|+.|+.++..+...|..+|+++++++
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGAGMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECCcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            589999999999999999999964699998765

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=93.39  E-value=0.088  Score=44.82  Aligned_cols=97  Identities=18%  Similarity=0.172  Sum_probs=60.9

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCC-------------CEEEcCCCCCccHHHHHHH
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV-------------TDFVNTSEHDRPIQEVIAE  260 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~-------------~~vv~~~~~~~~~~~~i~~  260 (361)
                      ....+|||+|+|. |..+-.+++. +..+|.+++.+++-.+.++++-.             +.-+.....|  ..+.+++
T Consensus        71 ~~p~~vLiiG~G~-G~~~~~~l~~-~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~~D--a~~~l~~  146 (276)
T d1mjfa_          71 PKPKRVLVIGGGD-GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGD--GFEFIKN  146 (276)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESC--HHHHHHH
T ss_pred             CCCceEEEecCCc-hHHHHHHHHh-CCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEECh--HHHHHhc
Confidence            4557999998764 3334444553 44589999999999998886321             1101111112  3445543


Q ss_pred             HcCCCccEEEEccCC----------hHHHHHHHHHhcCCCcEEEEEc
Q 018072          261 MTNGGVDRSVECTGN----------IDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       261 ~~~~g~Dvvid~~g~----------~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                        ++++|+||.-...          .+.++.+.+.|+++ |.++.-+
T Consensus       147 --~~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~-Gv~v~q~  190 (276)
T d1mjfa_         147 --NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNP-GIYVTQA  190 (276)
T ss_dssp             --CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             --cCCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCC-ceEEEec
Confidence              3589999863221          34578899999998 9987654

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=93.39  E-value=0.073  Score=43.56  Aligned_cols=96  Identities=22%  Similarity=0.248  Sum_probs=62.6

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHH---cCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcCCC
Q 018072          193 PERGSSVAVFGLGAVGLAAAEGARI---AGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGG  265 (361)
Q Consensus       193 ~~~g~~VlI~G~g~vG~~a~~~a~~---~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~~g  265 (361)
                      ++++.+||=+|+|. |..+..+++.   .++ +|+++|.+++-++.+++    .+....+.....+  .    ..+....
T Consensus        37 ~~~~~~vLDlGCGt-G~~~~~l~~~~~~~~~-~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d--~----~~~~~~~  108 (225)
T d1im8a_          37 VTADSNVYDLGCSR-GAATLSARRNINQPNV-KIIGIDNSQPMVERCRQHIAAYHSEIPVEILCND--I----RHVEIKN  108 (225)
T ss_dssp             CCTTCEEEEESCTT-CHHHHHHHHTCCCSSC-EEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSC--T----TTCCCCS
T ss_pred             cCCCCEEEEeccch-hhHHHHHHHhhcCCCC-ceEEeCCCHHHHHHHHHHhHhhcccchhhhccch--h----hcccccc
Confidence            68899999999875 6666677765   355 99999999998888865    2332222111111  0    0112235


Q ss_pred             ccEEEEccC--------ChHHHHHHHHHhcCCCcEEEEEc
Q 018072          266 VDRSVECTG--------NIDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       266 ~Dvvid~~g--------~~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      +|+++-+..        ....+....+.|+++ |.+++.-
T Consensus       109 ~d~i~~~~~l~~~~~~d~~~~l~~i~~~Lkpg-G~li~~~  147 (225)
T d1im8a_         109 ASMVILNFTLQFLPPEDRIALLTKIYEGLNPN-GVLVLSE  147 (225)
T ss_dssp             EEEEEEESCGGGSCGGGHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             ceeeEEeeeccccChhhHHHHHHHHHHhCCCC-ceeeccc
Confidence            677665422        124688999999998 9998764

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.38  E-value=0.11  Score=39.75  Aligned_cols=39  Identities=26%  Similarity=0.377  Sum_probs=33.0

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhh
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKR  232 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~  232 (361)
                      ..+.+|.|+|+|.+|...+..+...+. .+++.+|.++++
T Consensus         4 ~~~~KI~IiGaG~vG~~~a~~l~~~~l~~el~L~Di~~~~   43 (148)
T d1ldna1           4 NGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESK   43 (148)
T ss_dssp             TTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             CCCCeEEEECcCHHHHHHHHHHHhcCCCceEEEEeecccc
Confidence            456789999999999998888877774 589999999887

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=93.38  E-value=0.059  Score=42.45  Aligned_cols=40  Identities=25%  Similarity=0.314  Sum_probs=34.3

Q ss_pred             EEEEE-cCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH
Q 018072          198 SVAVF-GLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK  238 (361)
Q Consensus       198 ~VlI~-G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~  238 (361)
                      +|.|+ |+|.+|.+.++.+...|+ +|+..+|++++.+.+.+
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~-~V~l~~R~~e~~~~l~~   42 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGH-EIVVGSRREEKAEAKAA   42 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSHHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHH
Confidence            58888 569999999999999999 89999999998776643

>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=93.32  E-value=0.061  Score=46.77  Aligned_cols=98  Identities=17%  Similarity=0.142  Sum_probs=63.4

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcC------C--CEEEcCCCCCccHHHHHHHHcCCC
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG------V--TDFVNTSEHDRPIQEVIAEMTNGG  265 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G------~--~~vv~~~~~~~~~~~~i~~~~~~g  265 (361)
                      ...++|||+|+|. |..+-.+++.....+|.+++.+++-.+.++++-      +  +.-+.....|  ..+.+++ +++.
T Consensus        76 ~~pk~VLiiG~G~-G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~~D--a~~~l~~-~~~~  151 (312)
T d1uira_          76 PEPKRVLIVGGGE-GATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDD--ARAYLER-TEER  151 (312)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESC--HHHHHHH-CCCC
T ss_pred             CCcceEEEeCCCc-hHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEEch--HHHHhhh-cCCc
Confidence            4457999998865 555666666666669999999999988887641      1  0000001112  4555554 4448


Q ss_pred             ccEEEEcc----C---------ChHHHHHHHHHhcCCCcEEEEE
Q 018072          266 VDRSVECT----G---------NIDNMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       266 ~Dvvid~~----g---------~~~~~~~~~~~l~~~~G~iv~~  296 (361)
                      ||+||--.    +         +.+.++.+.+.|+++ |.++.-
T Consensus       152 yDvIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~-Gvlv~~  194 (312)
T d1uira_         152 YDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPG-GVMGMQ  194 (312)
T ss_dssp             EEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEE-EEEEEE
T ss_pred             ccEEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCC-ceEEEe
Confidence            99998532    1         123567888999998 988764

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.26  E-value=0.031  Score=47.60  Aligned_cols=33  Identities=27%  Similarity=0.392  Sum_probs=29.9

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChh
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK  231 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~  231 (361)
                      .|+|+|+|++|++++..++..|. +|+++++.++
T Consensus         4 ~V~IvGaGp~Gl~~A~~L~~~G~-~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGAGPSGLLLGQLLHKAGI-DNVILERQTP   36 (292)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTC-CEEEECSSCH
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCCC
Confidence            58999999999999999999999 8999988754

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=93.20  E-value=0.062  Score=47.38  Aligned_cols=33  Identities=24%  Similarity=0.281  Sum_probs=27.6

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCh
Q 018072          197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS  230 (361)
Q Consensus       197 ~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~  230 (361)
                      ..|||+|+ |.+|...+..+...|. .|+++++..
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~-~V~~~~r~~   35 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGY-EVHGIKRRA   35 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC--
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-EEEEEECCC
Confidence            46889997 9999999998888898 999998843

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=93.20  E-value=0.11  Score=40.21  Aligned_cols=133  Identities=11%  Similarity=0.110  Sum_probs=74.3

Q ss_pred             EEEEEcCCHHHHH-HHHHHHHc-CCCeEEEEcCChhhHHH-HHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072          198 SVAVFGLGAVGLA-AAEGARIA-GASRIIGVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       198 ~VlI~G~g~vG~~-a~~~a~~~-g~~~Vi~~~~~~~~~~~-~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      +|.|+|+|.+|.- .+...+.. +.+-+.+.++++++.+. +++++...    .+ +  +.+.+     ..+|+|+.++.
T Consensus         3 ri~iIG~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~----~~-~--~~~l~-----~~~D~V~I~tp   70 (164)
T d1tlta1           3 RIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPY----AD-S--LSSLA-----ASCDAVFVHSS   70 (164)
T ss_dssp             EEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCB----CS-S--HHHHH-----TTCSEEEECSC
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcccccc----cc-c--chhhh-----hhccccccccc
Confidence            6889999999864 56655554 55334455777766555 45677642    11 1  32221     25899999998


Q ss_pred             ChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChh-hhc--cccEEEEeeecCCCcCCcHHHHHHHHHcCCcc
Q 018072          275 NIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPI-NVL--NERTLKGTFFGNYKPRTDLPSVVDMYMNKVIR  345 (361)
Q Consensus       275 ~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~-~~~--~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l~  345 (361)
                      .....+.+..+|..  |.=+++-.+-....-..... ...  +++.+.-.+..++ .+...+.+.++++++.+.
T Consensus        71 ~~~h~~~~~~al~~--gk~V~~EKPla~~~~e~~~l~~~a~~~~~~~~v~~~~r~-~~~~~~~~~~~i~~g~ig  141 (164)
T d1tlta1          71 TASHFDVVSTLLNA--GVHVCVDKPLAENLRDAERLVELAARKKLTLMVGFNRRF-FVGCARHFIECVQNQTVP  141 (164)
T ss_dssp             TTHHHHHHHHHHHT--TCEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEECGGGG-HHHHHHHHHHHHHHTCCC
T ss_pred             chhccccccccccc--cceeeccccccCCHHHHHHHHHHHHHcCCcEEEEecccc-CHHHHHHHHHHHHCCCCC
Confidence            87778888888876  56666654332211111111 111  3443322222221 122335677788888773

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=93.12  E-value=0.1  Score=39.93  Aligned_cols=39  Identities=18%  Similarity=0.245  Sum_probs=31.5

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK  237 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~  237 (361)
                      +|-|+|.|.+|...+.-++..|. .|++.+++.++....+
T Consensus         2 kIgiIG~G~mG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~   40 (152)
T d1i36a2           2 RVGFIGFGEVAQTLASRLRSRGV-EVVTSLEGRSPSTIER   40 (152)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTC-EEEECCTTCCHHHHHH
T ss_pred             EEEEEcHHHHHHHHHHHHHHCCC-eEEEEcCchhHHHHHh
Confidence            58899999999999998888898 8888877765554443

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=93.11  E-value=0.063  Score=44.27  Aligned_cols=35  Identities=26%  Similarity=0.315  Sum_probs=30.8

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  229 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~  229 (361)
                      +.-.+|+|+|+|..|++++..+...|. +|++++++
T Consensus         4 ~~~~kVvVIGaGiaGl~~A~~L~~~G~-~V~vier~   38 (268)
T d1c0pa1           4 HSQKRVVVLGSGVIGLSSALILARKGY-SVHILARD   38 (268)
T ss_dssp             CCSCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred             CCCCcEEEECccHHHHHHHHHHHHCCC-CEEEEeCC
Confidence            445689999999999999999999999 89999875

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=93.00  E-value=0.16  Score=44.13  Aligned_cols=102  Identities=13%  Similarity=0.091  Sum_probs=65.5

Q ss_pred             cCCCCCCEEEEEcC--CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCC--EEEcCCCCCccHHHHHHHHc
Q 018072          191 AKPERGSSVAVFGL--GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVT--DFVNTSEHDRPIQEVIAEMT  262 (361)
Q Consensus       191 ~~~~~g~~VlI~G~--g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~--~vv~~~~~~~~~~~~i~~~~  262 (361)
                      ..+.+|++||=+.+  |+.++.    |...|+..|+.+|.++..++.+++    .|.+  .+ .....+  ..+.++.+.
T Consensus       140 ~~~~~g~~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~-~~i~~d--~~~~l~~~~  212 (317)
T d2b78a2         140 NGSAAGKTVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANH-QLVVMD--VFDYFKYAR  212 (317)
T ss_dssp             HTTTBTCEEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTE-EEEESC--HHHHHHHHH
T ss_pred             HHhhCCCceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcce-EEEEcc--HHHHHHHHH
Confidence            45678999998854  555543    234677789999999998888764    2332  11 111122  445555432


Q ss_pred             -CC-CccEEEEccCC---------------hHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072          263 -NG-GVDRSVECTGN---------------IDNMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       263 -~~-g~Dvvid~~g~---------------~~~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                       .+ .||+||--...               .+.+..++++|+++ |.++.+....
T Consensus       213 ~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pg-G~l~~~scs~  266 (317)
T d2b78a2         213 RHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSEN-GLIIASTNAA  266 (317)
T ss_dssp             HTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEE-EEEEEEECCT
T ss_pred             hhcCCCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCC-CEEEEEeCCc
Confidence             23 79999864331               13566788999997 9998877644

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=92.99  E-value=0.21  Score=42.80  Aligned_cols=98  Identities=13%  Similarity=0.110  Sum_probs=63.9

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCC---------CEEEcCCCCCccHHHHHHHHcCC
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGV---------TDFVNTSEHDRPIQEVIAEMTNG  264 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~---------~~vv~~~~~~~~~~~~i~~~~~~  264 (361)
                      ....+|||+|+|. |..+-.+++..+..+|.+++.+++-.+.++++-.         ..-+..  .|  ..+.+++ +++
T Consensus        88 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~--~D--a~~~l~~-~~~  161 (295)
T d1inla_          88 PNPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVI--AN--GAEYVRK-FKN  161 (295)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE--SC--HHHHGGG-CSS
T ss_pred             CCCceEEEecCCc-hHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEh--hh--HHHHHhc-CCC
Confidence            3457999998754 4455566776666699999999999888877421         111111  12  3444443 334


Q ss_pred             CccEEEEccC-----------ChHHHHHHHHHhcCCCcEEEEEcC
Q 018072          265 GVDRSVECTG-----------NIDNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       265 g~Dvvid~~g-----------~~~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      .||+||--..           +.+.++.+.+.|+++ |.++.-..
T Consensus       162 ~yDvIi~D~~dp~~~~~~~L~t~efy~~~~~~L~~~-Gi~v~q~~  205 (295)
T d1inla_         162 EFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKED-GVFSAETE  205 (295)
T ss_dssp             CEEEEEEEC----------CCSHHHHHHHHHHEEEE-EEEEEECC
T ss_pred             CCCEEEEcCCCCCcCchhhhccHHHHHHHHhhcCCC-cEEEEecC
Confidence            8999985321           234577889999998 99887654

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=92.95  E-value=0.082  Score=38.55  Aligned_cols=35  Identities=23%  Similarity=0.201  Sum_probs=31.3

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChh
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK  231 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~  231 (361)
                      .++|+|+|+|.+|+-+++.++.+|. +|..+++.+.
T Consensus        21 p~~vvIiGgG~ig~E~A~~l~~~G~-~Vtlve~~~~   55 (116)
T d1gesa2          21 PERVAVVGAGYIGVELGGVINGLGA-KTHLFEMFDA   55 (116)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred             CCEEEEECCChhhHHHHHHhhcccc-EEEEEeecch
Confidence            4789999999999999999999999 8999977654

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.92  E-value=0.11  Score=42.56  Aligned_cols=104  Identities=13%  Similarity=0.154  Sum_probs=67.9

Q ss_pred             hcCCCCCCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHH---
Q 018072          190 VAKPERGSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEM---  261 (361)
Q Consensus       190 ~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g-~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~---  261 (361)
                      ..+.....+||=+|.+. |+.++.+|+++. -.+|+.++.+++..+.+++    .|....+.....+  ..+.+..+   
T Consensus        54 L~~~~~~k~vLEiGt~~-GyStl~~a~al~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~Gd--a~e~l~~~~~~  130 (219)
T d2avda1          54 LARLIQAKKALDLGTFT-GYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKP--ALETLDELLAA  130 (219)
T ss_dssp             HHHHTTCCEEEEECCTT-SHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESC--HHHHHHHHHHT
T ss_pred             HHHccCCCeEEEEechh-hHHHHHHHHhCCCCceEEEEeechhHHHHHHHHHHhcCccceEEEEEee--hhhcchhhhhh
Confidence            34445667999999754 666777777663 2399999999998777654    4665433333333  33344333   


Q ss_pred             -cCCCccEEEEccCChH---HHHHHHHHhcCCCcEEEEEc
Q 018072          262 -TNGGVDRSVECTGNID---NMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       262 -~~~g~Dvvid~~g~~~---~~~~~~~~l~~~~G~iv~~g  297 (361)
                       ..+.||.||--.....   .++.+++.|+++ |.++.=.
T Consensus       131 ~~~~~fD~ifiD~dk~~y~~~~~~~~~lL~~G-Gvii~Dn  169 (219)
T d2avda1         131 GEAGTFDVAVVDADKENCSAYYERCLQLLRPG-GILAVLR  169 (219)
T ss_dssp             TCTTCEEEEEECSCSTTHHHHHHHHHHHEEEE-EEEEEEC
T ss_pred             cccCCccEEEEeCCHHHHHHHHHHHHHHhcCC-cEEEEeC
Confidence             2337999987665433   467999999996 8876643

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=92.92  E-value=0.43  Score=37.47  Aligned_cols=100  Identities=20%  Similarity=0.194  Sum_probs=58.8

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEE-cCCh-hhHHHHHHcCCCEEEcCCCCCccHHH-------HHHHHcCCCccE
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGV-DRSS-KRFEEAKKFGVTDFVNTSEHDRPIQE-------VIAEMTNGGVDR  268 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~-~~~~-~~~~~~~~~G~~~vv~~~~~~~~~~~-------~i~~~~~~g~Dv  268 (361)
                      +|.|.|.|-+|...++.+....--.++++ +..+ .....+...+......... ...+.+       .+.+.. .++|+
T Consensus         3 KVaINGfGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~g~~~~~~-~~vDi   80 (178)
T d1b7go1           3 NVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQS-IKKFEESGIPVAGTVEDLI-KTSDI   80 (178)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGG-HHHHHTTTCCCCCCHHHHH-HHCSE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCcc-ceeccccceecCCchhhhh-hcCCE
Confidence            68899999999999998876642266665 3333 3334444444332211110 000000       001110 15899


Q ss_pred             EEEccCChHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072          269 SVECTGNIDNMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       269 vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      |+||+|.....+.+-..+..+ -++++.+...
T Consensus        81 ViecTG~f~~~e~a~~hl~~G-~KvIi~~~~~  111 (178)
T d1b7go1          81 VVDTTPNGVGAQYKPIYLQLQ-RNAIFQGGEK  111 (178)
T ss_dssp             EEECCSTTHHHHHHHHHHHTT-CEEEECTTSC
T ss_pred             EEECCCCcCCHHHHHHHHHcC-CEEEEECCCC
Confidence            999999877788888888875 6777765433

>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Bacillus subtilis [TaxId: 1423]

Probab=92.81  E-value=0.53  Score=37.74  Aligned_cols=97  Identities=14%  Similarity=0.072  Sum_probs=65.2

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEE
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVE  271 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid  271 (361)
                      ...||=+|+|. |..++.+|+...-..+++++.++..+..+    ++.|.+.+......   .......+.++.+|.|+-
T Consensus        30 ~PlvLeIGcG~-G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~D---a~~l~~~~~~~~~d~v~i  105 (204)
T d2fcaa1          30 NPIHIEVGTGK-GQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNID---ADTLTDVFEPGEVKRVYL  105 (204)
T ss_dssp             CCEEEEECCTT-SHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCC---GGGHHHHCCTTSCCEEEE
T ss_pred             CceEEEEEecC-cHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhcccc---hhhhhcccCchhhhcccc
Confidence            34566679876 88888899887545999999999877665    44677643322221   112233344447888776


Q ss_pred             ccCC--------------hHHHHHHHHHhcCCCcEEEEEc
Q 018072          272 CTGN--------------IDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       272 ~~g~--------------~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      ....              ++.+....+.|+++ |.+.+..
T Consensus       106 ~fp~P~~k~~h~k~Rl~~~~~l~~~~r~Lkpg-G~l~i~T  144 (204)
T d2fcaa1         106 NFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKG-GSIHFKT  144 (204)
T ss_dssp             ESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTS-CEEEEEE
T ss_pred             ccccccchhhhcchhhhHHHHHHHHHHhCCCC-cEEEEEE
Confidence            5433              35788999999998 9987763

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=92.78  E-value=0.15  Score=40.81  Aligned_cols=90  Identities=21%  Similarity=0.240  Sum_probs=57.7

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  273 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~  273 (361)
                      =.|.+|.|+|.|.+|...++.++..|. +|++.++..... .....+....     .+  +.+.++.     .|+|.-++
T Consensus        47 L~gktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~-~~~~~~~~~~-----~~--l~~ll~~-----sD~i~~~~  112 (193)
T d1mx3a1          47 IRGETLGIIGLGRVGQAVALRAKAFGF-NVLFYDPYLSDG-VERALGLQRV-----ST--LQDLLFH-----SDCVTLHC  112 (193)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCTT-HHHHHTCEEC-----SS--HHHHHHH-----CSEEEECC
T ss_pred             eeCceEEEeccccccccceeeeecccc-ceeeccCccccc-chhhhccccc-----cc--hhhcccc-----CCEEEEee
Confidence            357899999999999999999999999 999998765432 2223343211     11  3333322     57776655


Q ss_pred             CC-hHH----HHHHHHHhcCCCcEEEEEcC
Q 018072          274 GN-IDN----MISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       274 g~-~~~----~~~~~~~l~~~~G~iv~~g~  298 (361)
                      .- +++    -...++.|+++ ..++.++-
T Consensus       113 plt~~T~~li~~~~l~~mk~~-a~lIN~sR  141 (193)
T d1mx3a1         113 GLNEHNHHLINDFTVKQMRQG-AFLVNTAR  141 (193)
T ss_dssp             CCCTTCTTSBSHHHHTTSCTT-EEEEECSC
T ss_pred             cccccchhhhhHHHHhccCCC-CeEEecCC
Confidence            42 222    13556777776 77777764

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=92.77  E-value=0.098  Score=39.19  Aligned_cols=39  Identities=23%  Similarity=0.297  Sum_probs=34.1

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChh
Q 018072          192 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK  231 (361)
Q Consensus       192 ~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~  231 (361)
                      .++++.+|+|+|+|.+|+-++..++.+|. .|..+++.+.
T Consensus        31 ~~~~~k~v~VIGgG~iG~E~A~~l~~~g~-~Vtvie~~~~   69 (133)
T d1q1ra2          31 QLIADNRLVVIGGGYIGLEVAATAIKANM-HVTLLDTAAR   69 (133)
T ss_dssp             TCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred             hhccCCEEEEECCchHHHHHHHHHHhhCc-ceeeeeeccc
Confidence            45678999999999999999999999998 8999987654

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=92.72  E-value=0.49  Score=36.72  Aligned_cols=96  Identities=20%  Similarity=0.124  Sum_probs=55.1

Q ss_pred             CCCCCCEEEEEcC--CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcCCC
Q 018072          192 KPERGSSVAVFGL--GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGG  265 (361)
Q Consensus       192 ~~~~g~~VlI~G~--g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~~g  265 (361)
                      .+..|.+||=.++  |.+|+   . |...|+ .|+++|.+++..+.+++    +|...-+...+.+ .+. .......+.
T Consensus        38 ~~~~g~~vLDl~~G~G~~~i---~-a~~~ga-~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~d-~~~-~~~~~~~~~  110 (171)
T d1ws6a1          38 RYPRRGRFLDPFAGSGAVGL---E-AASEGW-EAVLVEKDPEAVRLLKENVRRTGLGARVVALPVE-VFL-PEAKAQGER  110 (171)
T ss_dssp             HCTTCCEEEEETCSSCHHHH---H-HHHTTC-EEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHH-HHH-HHHHHTTCC
T ss_pred             cccCCCeEEEeccccchhhh---h-hhhccc-hhhhcccCHHHHhhhhHHHHhhccccceeeeehh-ccc-ccccccCCc
Confidence            4678889888765  55554   3 334588 78899999998887754    5664322222221 111 112233348


Q ss_pred             ccEEEEcc----CChHHHHHHHH--HhcCCCcEEEE
Q 018072          266 VDRSVECT----GNIDNMISAFE--CVHDGWGVAVL  295 (361)
Q Consensus       266 ~Dvvid~~----g~~~~~~~~~~--~l~~~~G~iv~  295 (361)
                      ||+||-..    +-...+...++  .++++ |.+++
T Consensus       111 fD~If~DPPY~~~~~~~l~~l~~~~ll~~~-g~ivi  145 (171)
T d1ws6a1         111 FTVAFMAPPYAMDLAALFGELLASGLVEAG-GLYVL  145 (171)
T ss_dssp             EEEEEECCCTTSCTTHHHHHHHHHTCEEEE-EEEEE
T ss_pred             cceeEEccccccCHHHHHHHHHHcCCcCCC-eEEEE
Confidence            99998643    22234444433  47776 76654

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=92.70  E-value=0.19  Score=40.18  Aligned_cols=90  Identities=12%  Similarity=0.171  Sum_probs=56.4

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      .|.++.|+|.|.+|...+++++..|. +|++.+............+...   ..  +  +.+.+..     .|+|..++.
T Consensus        46 ~g~tvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~~~~~~---~~--~--l~~ll~~-----sD~v~l~~p  112 (191)
T d1gdha1          46 DNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRASSSDEASYQATF---HD--S--LDSLLSV-----SQFFSLNAP  112 (191)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCCHHHHHHHTCEE---CS--S--HHHHHHH-----CSEEEECCC
T ss_pred             cccceEEeecccchHHHHHHHHhhcc-ccccccccccccchhhcccccc---cC--C--HHHHHhh-----CCeEEecCC
Confidence            47999999999999999999999999 8999987655433333322211   11  1  3333322     467766543


Q ss_pred             -ChHH----HHHHHHHhcCCCcEEEEEcC
Q 018072          275 -NIDN----MISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       275 -~~~~----~~~~~~~l~~~~G~iv~~g~  298 (361)
                       ++++    =...++.|+++ ..++.++-
T Consensus       113 lt~~T~~li~~~~l~~mk~~-a~lIN~sR  140 (191)
T d1gdha1         113 STPETRYFFNKATIKSLPQG-AIVVNTAR  140 (191)
T ss_dssp             CCTTTTTCBSHHHHTTSCTT-EEEEECSC
T ss_pred             CCchHhheecHHHhhCcCCc-cEEEecCC
Confidence             2222    13566677775 66666653

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.69  E-value=0.092  Score=38.68  Aligned_cols=36  Identities=17%  Similarity=0.274  Sum_probs=31.6

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChh
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK  231 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~  231 (361)
                      ...+++|+|+|.+|+-.++.+..+|. .|..+++.++
T Consensus        22 ~p~~~vIiG~G~ig~E~A~~l~~lG~-~Vtii~~~~~   57 (122)
T d1v59a2          22 IPKRLTIIGGGIIGLEMGSVYSRLGS-KVTVVEFQPQ   57 (122)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred             CCCeEEEECCCchHHHHHHHHHhhCc-ceeEEEeccc
Confidence            34799999999999999999999999 8999977653

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.66  E-value=0.064  Score=45.81  Aligned_cols=36  Identities=25%  Similarity=0.386  Sum_probs=31.7

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  230 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~  230 (361)
                      ++..+|+|+|+|..|+.|+..+...|. +|++++.++
T Consensus         3 ~~~~kViVIGaG~aGL~aA~~L~~~G~-~V~VlEa~~   38 (449)
T d2dw4a2           3 KKTGKVIIIGSGVSGLAAARQLQSFGM-DVTLLEARD   38 (449)
T ss_dssp             SCCCEEEEECCBHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCCCcEEEECCCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence            456789999999999999999999999 899997764

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=92.58  E-value=0.042  Score=46.24  Aligned_cols=32  Identities=16%  Similarity=0.278  Sum_probs=28.3

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCh
Q 018072          198 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS  230 (361)
Q Consensus       198 ~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~  230 (361)
                      +|||+|+ |.+|...+..++..|. .|+++++++
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~-~Vi~~~r~~   35 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNV-EVIPTDVQD   35 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSE-EEEEECTTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEeechh
Confidence            6899998 9999999999988898 899998753

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=92.56  E-value=0.048  Score=36.88  Aligned_cols=35  Identities=20%  Similarity=0.294  Sum_probs=30.8

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhh
Q 018072          197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR  232 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~  232 (361)
                      .+|.|+|+|-+|.+.++.++.+|. ++.+.+.+++-
T Consensus         2 k~vgIlG~GQLgrMl~~Aa~~LG~-~v~vldp~~~~   36 (78)
T d3etja2           2 KQVCVLGNGQLGRMLRQAGEPLGI-AVWPVGLDAEP   36 (78)
T ss_dssp             EEEEEEBCSHHHHHHHHHHGGGTE-EEEEECTTSCG
T ss_pred             CEEEEEcCCHHHHHHHHHHHHcCC-EEEEEcCCCCC
Confidence            478999999999999999999999 88888876543

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.56  E-value=0.23  Score=43.08  Aligned_cols=74  Identities=16%  Similarity=0.156  Sum_probs=44.2

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCh----hhHHHH---HHcCCCEEEcCCCCCccHHHHHHHHcCC-Ccc
Q 018072          197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS----KRFEEA---KKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVD  267 (361)
Q Consensus       197 ~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~----~~~~~~---~~~G~~~vv~~~~~~~~~~~~i~~~~~~-g~D  267 (361)
                      +.|||+|+ |.+|...+..+...|. +|+++++..    +.....   ..-+...+. .+-.+   .+.+...... ++|
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~-~Dl~d---~~~l~~~~~~~~~d   76 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGY-DCVVADNLSNSTYDSVARLEVLTKHHIPFYE-VDLCD---RKGLEKVFKEYKID   76 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCTHHHHHHHHHHTSCCCEEE-CCTTC---HHHHHHHHHHSCCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-eEEEEECCCCcchhHHHhHHhhcccCCeEEE-eecCC---HHHHHHHHhccCCC
Confidence            46889998 9999999998888898 898886421    122222   222333322 12122   1223332222 799


Q ss_pred             EEEEccCC
Q 018072          268 RSVECTGN  275 (361)
Q Consensus       268 vvid~~g~  275 (361)
                      +||++++.
T Consensus        77 ~VihlAa~   84 (347)
T d1z45a2          77 SVIHFAGL   84 (347)
T ss_dssp             EEEECCSC
T ss_pred             EEEEcccc
Confidence            99998764

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=92.54  E-value=0.099  Score=38.29  Aligned_cols=37  Identities=22%  Similarity=0.303  Sum_probs=31.5

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChh
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK  231 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~  231 (361)
                      +..++++|+|+|.+|+-.++.++.+|. .|..+.+.+.
T Consensus        20 ~~p~~i~IiG~G~ig~E~A~~l~~~G~-~Vtiv~~~~~   56 (119)
T d3lada2          20 NVPGKLGVIGAGVIGLELGSVWARLGA-EVTVLEAMDK   56 (119)
T ss_dssp             SCCSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred             cCCCeEEEECCChHHHHHHHHHHHcCC-ceEEEEeecc
Confidence            345889999999999999999999999 8888866543

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=92.42  E-value=0.11  Score=40.88  Aligned_cols=42  Identities=19%  Similarity=0.287  Sum_probs=33.6

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAK  237 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~  237 (361)
                      -++.+|+|+|+|+++.+++..+..  ..+|.++.|+.+|.+.+.
T Consensus        16 ~~~k~vlIlGaGG~arai~~aL~~--~~~i~I~nR~~~ka~~l~   57 (177)
T d1nvta1          16 VKDKNIVIYGAGGAARAVAFELAK--DNNIIIANRTVEKAEALA   57 (177)
T ss_dssp             CCSCEEEEECCSHHHHHHHHHHTS--SSEEEEECSSHHHHHHHH
T ss_pred             cCCCEEEEECCcHHHHHHHHHHcc--ccceeeehhhhhHHHHHH
Confidence            467899999999999988766643  448999999988877653

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=92.39  E-value=0.097  Score=38.02  Aligned_cols=35  Identities=26%  Similarity=0.355  Sum_probs=31.0

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChh
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK  231 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~  231 (361)
                      +++++|+|+|.+|+-+++.++.+|. +|..+++.+.
T Consensus        21 p~~vvIiGgG~~G~E~A~~l~~~g~-~Vtlve~~~~   55 (115)
T d1lvla2          21 PQHLVVVGGGYIGLELGIAYRKLGA-QVSVVEARER   55 (115)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSSS
T ss_pred             CCeEEEECCCHHHHHHHHHHhhccc-ceEEEeeecc
Confidence            4799999999999999999999998 8999877653

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=92.34  E-value=0.98  Score=38.03  Aligned_cols=59  Identities=17%  Similarity=0.144  Sum_probs=44.0

Q ss_pred             hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEc--CChhhHHHHHHcCCCEEEc
Q 018072          188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD--RSSKRFEEAKKFGVTDFVN  246 (361)
Q Consensus       188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~--~~~~~~~~~~~~G~~~vv~  246 (361)
                      .+...++++.+|+...+|..|++++..|+.+|.+-++.+.  .++.|.+.++.+|++.++.
T Consensus        52 ~~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v  112 (292)
T d2bhsa1          52 EKRGEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILV  112 (292)
T ss_dssp             HHTTSCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHHHHHTTCEEEEE
T ss_pred             HHhCCcCCCceeeeecccchhHHHHHHHHhcCcceEeeeccCchhhhhHHHHHhCCCccee
Confidence            3445567777766667899999999999999985444443  3567888999999976543

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.33  E-value=0.97  Score=39.41  Aligned_cols=109  Identities=17%  Similarity=0.181  Sum_probs=70.1

Q ss_pred             hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEc--CChhhHHHHHHcCCCEEEcCCCC------C--------
Q 018072          188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD--RSSKRFEEAKKFGVTDFVNTSEH------D--------  251 (361)
Q Consensus       188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~--~~~~~~~~~~~~G~~~vv~~~~~------~--------  251 (361)
                      .+...++++..|+...+|..|.+.+..|+.+|.+-++.+.  .+++|.+.++.+|++.+......      +        
T Consensus        89 ~~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~~~GA~vv~v~~~~~~~~~~~~~~~~~~~  168 (355)
T d1jbqa_          89 ERDGTLKPGDTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRL  168 (355)
T ss_dssp             HHHTCSCTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CCHHHHHHHH
T ss_pred             HHcCCcccCceEEEecccchhhHHHHHHHhccCCeEEEeeccchHHHHHHHHhcCCeEEEecccccchhhhhhhhHHHHH
Confidence            3445567777777767899999999999999995555553  34578999999999865432110      0        


Q ss_pred             --------------c---------cHHHHHHHHcCCCccEEEEccCChHHHH---HHHHHhcCCCcEEEEEc
Q 018072          252 --------------R---------PIQEVIAEMTNGGVDRSVECTGNIDNMI---SAFECVHDGWGVAVLVG  297 (361)
Q Consensus       252 --------------~---------~~~~~i~~~~~~g~Dvvid~~g~~~~~~---~~~~~l~~~~G~iv~~g  297 (361)
                                    .         +....+.+..++.+|.|+.++|+..++.   ..++...+. -+++.+.
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~-~kii~ve  239 (355)
T d1jbqa_         169 KNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPG-CRIIGVD  239 (355)
T ss_dssp             HHHSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTT-CEEEEEE
T ss_pred             HHhccccccccccCcccchhhhcccchhhhhhhcCCCCCeeEecccCCchHHHHHHHHhhcCCc-ceEEeec
Confidence                          0         0111121222346899999999766554   444455555 6776664

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.31  E-value=0.2  Score=43.15  Aligned_cols=32  Identities=22%  Similarity=0.185  Sum_probs=28.6

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCC
Q 018072          197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS  229 (361)
Q Consensus       197 ~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~  229 (361)
                      .++||+|+ |.+|...+..+...|. .|+++++.
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~-~V~~~~r~   34 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGY-EVHGLIRR   34 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcC-EEEEEECC
Confidence            47899998 9999999999999998 89999874

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.21  E-value=0.27  Score=38.61  Aligned_cols=90  Identities=14%  Similarity=0.206  Sum_probs=62.0

Q ss_pred             EEEEEcCCHHHHHHHHHHHHc-CCCeEEE-EcCChhhHHHH-HHcCCCE---EEcCCCCCccHHHHHHHHcCCCccEEEE
Q 018072          198 SVAVFGLGAVGLAAAEGARIA-GASRIIG-VDRSSKRFEEA-KKFGVTD---FVNTSEHDRPIQEVIAEMTNGGVDRSVE  271 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~-g~~~Vi~-~~~~~~~~~~~-~~~G~~~---vv~~~~~~~~~~~~i~~~~~~g~Dvvid  271 (361)
                      ++.|+|+|.+|...++.++.. +. ++++ .++++++.+.+ ++++...   ++  .    ++.+.+.   +..+|+|+.
T Consensus         3 ki~iIG~G~~g~~~~~~l~~~~~~-~i~ai~d~~~~~~~~~~~~~~~~~~~~~~--~----~~~~ll~---~~~iD~v~I   72 (184)
T d1ydwa1           3 RIGVMGCADIARKVSRAIHLAPNA-TISGVASRSLEKAKAFATANNYPESTKIH--G----SYESLLE---DPEIDALYV   72 (184)
T ss_dssp             EEEEESCCTTHHHHHHHHHHCTTE-EEEEEECSSHHHHHHHHHHTTCCTTCEEE--S----SHHHHHH---CTTCCEEEE
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCC-EEEEEEeCCccccccchhccccccceeec--C----cHHHhhh---ccccceeee
Confidence            688999999999888888776 45 6664 47787775554 5566431   22  1    1444432   237999999


Q ss_pred             ccCChHHHHHHHHHhcCCCcEEEEEcCC
Q 018072          272 CTGNIDNMISAFECVHDGWGVAVLVGVP  299 (361)
Q Consensus       272 ~~g~~~~~~~~~~~l~~~~G~iv~~g~~  299 (361)
                      ++......+.+..++..  |.=+++..+
T Consensus        73 ~tp~~~h~~~~~~~l~~--g~~v~~EKP   98 (184)
T d1ydwa1          73 PLPTSLHVEWAIKAAEK--GKHILLEKP   98 (184)
T ss_dssp             CCCGGGHHHHHHHHHTT--TCEEEECSS
T ss_pred             cccchhhcchhhhhhhc--cceeecccc
Confidence            99987788888888886  566666543

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.07  E-value=0.31  Score=38.50  Aligned_cols=90  Identities=19%  Similarity=0.235  Sum_probs=59.9

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEcc
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECT  273 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~  273 (361)
                      -.|.++.|+|.|.+|...++.++..|. +|++.++...+.+. ...+...    .  +  +.+.+++     .|+|+-++
T Consensus        42 l~~k~vgiiG~G~IG~~va~~~~~fg~-~v~~~d~~~~~~~~-~~~~~~~----~--~--l~ell~~-----sDiv~~~~  106 (184)
T d1ygya1          42 IFGKTVGVVGLGRIGQLVAQRIAAFGA-YVVAYDPYVSPARA-AQLGIEL----L--S--LDDLLAR-----ADFISVHL  106 (184)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCHHHH-HHHTCEE----C--C--HHHHHHH-----CSEEEECC
T ss_pred             ccceeeeeccccchhHHHHHHhhhccc-eEEeecCCCChhHH-hhcCcee----c--c--HHHHHhh-----CCEEEEcC
Confidence            357899999999999999999999999 99999887654433 2333321    1  1  4333332     57777765


Q ss_pred             CC-hHH---H-HHHHHHhcCCCcEEEEEcCC
Q 018072          274 GN-IDN---M-ISAFECVHDGWGVAVLVGVP  299 (361)
Q Consensus       274 g~-~~~---~-~~~~~~l~~~~G~iv~~g~~  299 (361)
                      .- +++   + ...++.|+++ ..++.++-.
T Consensus       107 Plt~~T~~lin~~~l~~mk~~-a~lIN~sRG  136 (184)
T d1ygya1         107 PKTPETAGLIDKEALAKTKPG-VIIVNAARG  136 (184)
T ss_dssp             CCSTTTTTCBCHHHHTTSCTT-EEEEECSCT
T ss_pred             CCCchhhhhhhHHHHhhhCCC-ceEEEecch
Confidence            42 222   1 3666777776 777777643

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=92.07  E-value=0.1  Score=40.31  Aligned_cols=36  Identities=25%  Similarity=0.358  Sum_probs=30.3

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCCh
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSS  230 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~  230 (361)
                      .|.+|+|+|+|.+|+.+++.++..+. .+|+.++.++
T Consensus         1 ~gkrivIvGgG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            47899999999999999998888875 2788887665

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.06  E-value=0.25  Score=41.24  Aligned_cols=42  Identities=24%  Similarity=0.264  Sum_probs=32.1

Q ss_pred             CCCEEEEEcC-CHHHHHHHH-HHHH--cCCCeEEEEcCChhhHHHHH
Q 018072          195 RGSSVAVFGL-GAVGLAAAE-GARI--AGASRIIGVDRSSKRFEEAK  237 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~-~a~~--~g~~~Vi~~~~~~~~~~~~~  237 (361)
                      .|..++|+|+ +++|.+.++ +|+.  .|+ +|+.+++++++++.+.
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~-~Vv~~~r~~~~l~~~~   50 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLK   50 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCC-EEEEEECCHHHHHHHH
Confidence            3566777788 899998766 5553  577 9999999999887663

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=92.00  E-value=0.069  Score=44.53  Aligned_cols=33  Identities=27%  Similarity=0.354  Sum_probs=29.5

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChh
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK  231 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~  231 (361)
                      .|+|+|+|+.|++++..|...|. +|++++++++
T Consensus         6 DViIIGaG~aGl~aA~~la~~G~-~V~vlEk~~~   38 (253)
T d2gqfa1           6 ENIIIGAGAAGLFCAAQLAKLGK-SVTVFDNGKK   38 (253)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred             cEEEECcCHHHHHHHHHHHHCCC-cEEEEecCCC
Confidence            48899999999999999999998 8999998764

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.99  E-value=0.054  Score=44.67  Aligned_cols=74  Identities=23%  Similarity=0.306  Sum_probs=45.2

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHHcCCCEE-EcCCCCCccHHHHHHHHcCCCccEEEEc
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKFGVTDF-VNTSEHDRPIQEVIAEMTNGGVDRSVEC  272 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~~G~~~v-v~~~~~~~~~~~~i~~~~~~g~Dvvid~  272 (361)
                      ..+|||+|+ |.+|...++.+...|. .+|+++.+++.+...-..-..... .|..+    . +.+.... .++|+++.+
T Consensus        14 ~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~~D~~~----~-~~~~~~~-~~~d~vi~~   87 (232)
T d2bkaa1          14 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEK----L-DDYASAF-QGHDVGFCC   87 (232)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGG----G-GGGGGGG-SSCSEEEEC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeeeecccc----c-ccccccc-ccccccccc
Confidence            468999998 9999999998877774 479999887644322111122221 12211    1 1111111 268999999


Q ss_pred             cCC
Q 018072          273 TGN  275 (361)
Q Consensus       273 ~g~  275 (361)
                      +|.
T Consensus        88 ~~~   90 (232)
T d2bkaa1          88 LGT   90 (232)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            875

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=91.99  E-value=0.069  Score=44.12  Aligned_cols=33  Identities=42%  Similarity=0.584  Sum_probs=28.9

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChh
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK  231 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~  231 (361)
                      .|+|+|+|+.|++++..+...|. +|+.+++++.
T Consensus         4 DViIIGaG~aGl~aA~~la~~G~-~V~liEk~~~   36 (251)
T d2i0za1           4 DVIVIGGGPSGLMAAIGAAEEGA-NVLLLDKGNK   36 (251)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-cEEEEeCCCC
Confidence            38899999999999988888999 8999988753

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=91.96  E-value=0.099  Score=45.44  Aligned_cols=73  Identities=16%  Similarity=0.133  Sum_probs=45.4

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc-CCCEEEcCCCCC-ccHHHHHHHHcCCCccEEEEccC
Q 018072          198 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GVTDFVNTSEHD-RPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       198 ~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~-G~~~vv~~~~~~-~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      +|||+|+ |.+|...++.+...|...|++++....+...+.+. .+. .+.-+-.+ .++.+...    .++|+|+.+++
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~-~i~~Di~~~~~~~~~~~----~~~d~Vih~a~   76 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFH-FVEGDISIHSEWIEYHV----KKCDVVLPLVA   76 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEE-EEECCTTTCSHHHHHHH----HHCSEEEECBC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeE-EEECccCChHHHHHHHH----hCCCccccccc
Confidence            6999998 99999999888888854899998866554433322 222 22222111 12332221    25899999887


Q ss_pred             C
Q 018072          275 N  275 (361)
Q Consensus       275 ~  275 (361)
                      -
T Consensus        77 ~   77 (342)
T d2blla1          77 I   77 (342)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.96  E-value=0.11  Score=41.80  Aligned_cols=40  Identities=35%  Similarity=0.591  Sum_probs=35.8

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK  238 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~  238 (361)
                      +|.|+|+|-+|+..+..+...|. +|+++|.++++.+.+.+
T Consensus         2 kI~ViGlG~vGl~~a~~la~~g~-~V~g~D~n~~~i~~ln~   41 (202)
T d1mv8a2           2 RISIFGLGYVGAVCAGCLSARGH-EVIGVDVSSTKIDLINQ   41 (202)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHT
T ss_pred             EEEEECCCHhHHHHHHHHHhCCC-cEEEEeCCHHHHHHhcc
Confidence            58899999999998888888898 99999999999988875

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=91.93  E-value=0.084  Score=38.95  Aligned_cols=38  Identities=24%  Similarity=0.272  Sum_probs=33.2

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhh
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKR  232 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~  232 (361)
                      +..++++|+|+|.+|+-.++..+.+|. +|..+.+++.-
T Consensus        23 ~~p~~~viiG~G~iglE~A~~~~~~G~-~Vtvi~~~~~~   60 (123)
T d1dxla2          23 EIPKKLVVIGAGYIGLEMGSVWGRIGS-EVTVVEFASEI   60 (123)
T ss_dssp             SCCSEEEESCCSHHHHHHHHHHHHHTC-EEEEECSSSSS
T ss_pred             ccCCeEEEEccchHHHHHHHHHHhcCC-eEEEEEEcccc
Confidence            445899999999999999999999998 99999877653

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.93  E-value=0.049  Score=47.65  Aligned_cols=94  Identities=24%  Similarity=0.274  Sum_probs=53.5

Q ss_pred             hcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCE---EEcCCCCCccHHHHHHHHc
Q 018072          190 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTD---FVNTSEHDRPIQEVIAEMT  262 (361)
Q Consensus       190 ~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~---vv~~~~~~~~~~~~i~~~~  262 (361)
                      .....+|++||-+|+|. |.++..+| ..|+++|++++.++. .+.+    ++.+...   ++.-...+  +     .+.
T Consensus        33 ~~~~~~~~~VLDlGcGt-G~ls~~aa-~~Ga~~V~avd~s~~-~~~a~~~~~~~~~~~~i~~i~~~~~~--l-----~~~  102 (328)
T d1g6q1_          33 NKDLFKDKIVLDVGCGT-GILSMFAA-KHGAKHVIGVDMSSI-IEMAKELVELNGFSDKITLLRGKLED--V-----HLP  102 (328)
T ss_dssp             HHHHHTTCEEEEETCTT-SHHHHHHH-HTCCSEEEEEESSTH-HHHHHHHHHHTTCTTTEEEEESCTTT--S-----CCS
T ss_pred             ccccCCcCEEEEeCCCC-CHHHHHHH-HhCCCEEEEEeCCHH-HHHHHHHHHHhCccccceEEEeehhh--c-----cCc
Confidence            34456889999999874 66665444 468879999998862 2333    3344432   22222222  1     122


Q ss_pred             CCCccEEEEccC-----C---hH-HHHHHHHHhcCCCcEEE
Q 018072          263 NGGVDRSVECTG-----N---ID-NMISAFECVHDGWGVAV  294 (361)
Q Consensus       263 ~~g~Dvvid~~g-----~---~~-~~~~~~~~l~~~~G~iv  294 (361)
                      ++.+|+|+...-     .   .. .+...-+.|+++ |+++
T Consensus       103 ~~~~D~i~se~~~~~~~~e~~~~~~~~a~~r~Lkpg-G~ii  142 (328)
T d1g6q1_         103 FPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEG-GLIF  142 (328)
T ss_dssp             SSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEE-EEEE
T ss_pred             ccceeEEEEEecceeeccchhHHHHHHHHHhccCCC-eEEE
Confidence            337999876321     1   11 233444789997 8763

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=91.82  E-value=0.12  Score=38.16  Aligned_cols=36  Identities=22%  Similarity=0.286  Sum_probs=31.8

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  230 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~  230 (361)
                      +.+++++|+|+|.+|+-.++..+.+|. +|..+.+.+
T Consensus        24 ~~p~~vvIiGgG~IG~E~A~~~~~~G~-~Vtive~~~   59 (125)
T d1ojta2          24 EVPGKLLIIGGGIIGLEMGTVYSTLGS-RLDVVEMMD   59 (125)
T ss_dssp             CCCSEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             ccCCeEEEECCCHHHHHHHHHhhcCCC-EEEEEEeec
Confidence            446899999999999999999999999 899987654

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.81  E-value=0.1  Score=38.44  Aligned_cols=34  Identities=24%  Similarity=0.102  Sum_probs=29.4

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  229 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~  229 (361)
                      ..++++|+|+|.+|+-.++.++.+|. .|..+.++
T Consensus        19 ~P~~vvIIGgG~iG~E~A~~l~~lG~-~Vtii~~~   52 (122)
T d1h6va2          19 CPGKTLVVGASYVALECAGFLAGIGL-DVTVMVRS   52 (122)
T ss_dssp             CCCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             CCCeEEEECCCccHHHHHHHHhhcCC-eEEEEEec
Confidence            34689999999999999999999999 77777654

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=91.75  E-value=0.18  Score=40.17  Aligned_cols=89  Identities=13%  Similarity=0.057  Sum_probs=57.2

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      .+.++.|+|.|.+|...++.++..|. +|++.++........+..+....   .+    ..+.+     ...|+|.-+..
T Consensus        43 ~~~~vgiiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~~~~~~~---~~----l~~~l-----~~sD~v~~~~p  109 (188)
T d2naca1          43 EAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKELNLTWH---AT----REDMY-----PVCDVVTLNCP  109 (188)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHHTCEEC---SS----HHHHG-----GGCSEEEECSC
T ss_pred             cccceeeccccccchhhhhhhhccCc-eEEEEeecccccccccccccccc---CC----HHHHH-----Hhccchhhccc
Confidence            57899999999999999999999999 99999887655555555443221   11    22221     13567766544


Q ss_pred             C-hHH----HHHHHHHhcCCCcEEEEEc
Q 018072          275 N-IDN----MISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       275 ~-~~~----~~~~~~~l~~~~G~iv~~g  297 (361)
                      - +++    =...++.|+++ ..++.++
T Consensus       110 lt~~T~~li~~~~l~~mk~g-a~lIN~a  136 (188)
T d2naca1         110 LHPETEHMINDETLKLFKRG-AYIVNTA  136 (188)
T ss_dssp             CCTTTTTCBSHHHHTTSCTT-EEEEECS
T ss_pred             ccccchhhhHHHHHHhCCCC-CEEEecC
Confidence            2 111    23556667665 6666665

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=91.67  E-value=0.25  Score=40.86  Aligned_cols=33  Identities=24%  Similarity=0.426  Sum_probs=28.5

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChh
Q 018072          198 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK  231 (361)
Q Consensus       198 ~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~  231 (361)
                      .|||+|+ +++|.+.++.+...|+ +|+.++++++
T Consensus         3 VvlITGas~GIG~aiA~~la~~Ga-~V~~~~~~~~   36 (257)
T d1fjha_           3 IIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDA   36 (257)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECChH
Confidence            5788887 8999999999999999 8999988754

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=91.64  E-value=0.46  Score=37.18  Aligned_cols=88  Identities=10%  Similarity=0.049  Sum_probs=50.0

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh--hhHHHHHHcCCCEEEcC--CCCCccHHHHHHHHcCCCccEEEEcc
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS--KRFEEAKKFGVTDFVNT--SEHDRPIQEVIAEMTNGGVDRSVECT  273 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~--~~~~~~~~~G~~~vv~~--~~~~~~~~~~i~~~~~~g~Dvvid~~  273 (361)
                      +|.|+|+|..|.+.+..+...|. .|..+.++.  +..+.+.+..-...+..  ..........+.+.. ...|+|+.++
T Consensus         2 kI~ViGaG~~GtalA~~la~~g~-~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~ad~Ii~av   79 (180)
T d1txga2           2 IVSILGAGAMGSALSVPLVDNGN-EVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCL-ENAEVVLLGV   79 (180)
T ss_dssp             EEEEESCCHHHHHHHHHHHHHCC-EEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHH-TTCSEEEECS
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-EEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHH-hccchhhccc
Confidence            68899999999998888877787 888887743  33444433211100000  000000011111111 2589999999


Q ss_pred             CChHHHHHHHHHhcC
Q 018072          274 GNIDNMISAFECVHD  288 (361)
Q Consensus       274 g~~~~~~~~~~~l~~  288 (361)
                      .. ..++..++.+.+
T Consensus        80 ps-~~~~~~~~~l~~   93 (180)
T d1txga2          80 ST-DGVLPVMSRILP   93 (180)
T ss_dssp             CG-GGHHHHHHHHTT
T ss_pred             ch-hhhHHHHHhhcc
Confidence            87 666666666554

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.64  E-value=0.08  Score=42.90  Aligned_cols=32  Identities=19%  Similarity=0.389  Sum_probs=28.7

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  230 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~  230 (361)
                      .|+|+|+|..|+.++..+...|. +|+++++++
T Consensus         7 DviViGaG~~Gl~~A~~La~~G~-~V~vlE~~~   38 (297)
T d2bcgg1           7 DVIVLGTGITECILSGLLSVDGK-KVLHIDKQD   38 (297)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-CEEEEcCCC
Confidence            38899999999999998889998 899999875

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.63  E-value=0.15  Score=37.67  Aligned_cols=34  Identities=15%  Similarity=0.154  Sum_probs=30.7

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  230 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~  230 (361)
                      .++++|+|+|.+|+-.++.++.+|. +|+.+.+++
T Consensus        22 pk~vvIvGgG~iG~E~A~~l~~~G~-~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGAGYIAVEMAGILSALGS-KTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCEEEEEcCCccHHHHHHHHhcCCc-EEEEEeecc
Confidence            3789999999999999999999999 899997765

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.57  E-value=0.19  Score=42.76  Aligned_cols=77  Identities=19%  Similarity=0.193  Sum_probs=43.7

Q ss_pred             EEEEcC-CHHHHHHHHHHHHcCCC--eEEEEcCChhhHH----HHHHc---CCCE-EEcCCCCC-ccHHHHHHHHcCCCc
Q 018072          199 VAVFGL-GAVGLAAAEGARIAGAS--RIIGVDRSSKRFE----EAKKF---GVTD-FVNTSEHD-RPIQEVIAEMTNGGV  266 (361)
Q Consensus       199 VlI~G~-g~vG~~a~~~a~~~g~~--~Vi~~~~~~~~~~----~~~~~---G~~~-vv~~~~~~-~~~~~~i~~~~~~g~  266 (361)
                      |||+|+ +++|.+.+..+...|++  .|..+.++.++.+    .++++   +... .+..+-.+ .++.+.+.....+..
T Consensus         5 vlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g~i   84 (285)
T d1jtva_           5 VLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEGRV   84 (285)
T ss_dssp             EEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTSCC
T ss_pred             EEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccccch
Confidence            456687 89999999888888873  2334445443332    22333   3222 22222222 224444444444589


Q ss_pred             cEEEEccCC
Q 018072          267 DRSVECTGN  275 (361)
Q Consensus       267 Dvvid~~g~  275 (361)
                      |+++++.|.
T Consensus        85 dilvnnag~   93 (285)
T d1jtva_          85 DVLVCNAGL   93 (285)
T ss_dssp             SEEEECCCC
T ss_pred             hhhhhcccc
Confidence            999998864

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=91.57  E-value=0.81  Score=38.01  Aligned_cols=32  Identities=31%  Similarity=0.430  Sum_probs=28.7

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEE
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGV  226 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~  226 (361)
                      -.|.+|+|.|.|.+|..+++++...|+ +|+++
T Consensus        34 l~g~~v~IQGfGnVG~~~a~~L~e~Ga-kvvav   65 (255)
T d1bgva1          34 LVGKTVALAGFGNVAWGAAKKLAELGA-KAVTL   65 (255)
T ss_dssp             STTCEEEECCSSHHHHHHHHHHHHHTC-EEEEE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEE
Confidence            467899999999999999999999999 77766

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=91.54  E-value=0.31  Score=41.02  Aligned_cols=34  Identities=21%  Similarity=0.190  Sum_probs=28.9

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCh
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSS  230 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~  230 (361)
                      -.+|||+|+ |.+|...+..+...|. .|+++.+++
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~   37 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGH-PTYVLFRPE   37 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCC
Confidence            357999998 9999999998888998 888887754

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=91.23  E-value=0.17  Score=44.33  Aligned_cols=75  Identities=13%  Similarity=0.202  Sum_probs=46.7

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEc
Q 018072          194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  272 (361)
Q Consensus       194 ~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~  272 (361)
                      ...-+|||+|+ |.+|...+..+...|. .|+++++....... ...........+-.+  .......+  .++|.|+.+
T Consensus        13 ~~nMKILVTGgsGfIGs~lv~~L~~~g~-~V~~~d~~~~~~~~-~~~~~~~~~~~D~~~--~~~~~~~~--~~~d~Vih~   86 (363)
T d2c5aa1          13 SENLKISITGAGGFIASHIARRLKHEGH-YVIASDWKKNEHMT-EDMFCDEFHLVDLRV--MENCLKVT--EGVDHVFNL   86 (363)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCSSSC-GGGTCSEEEECCTTS--HHHHHHHH--TTCSEEEEC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCCccchh-hhcccCcEEEeechh--HHHHHHHh--hcCCeEeec
Confidence            35778999988 9999999999999998 89998765432111 112222222222222  33333322  368999997


Q ss_pred             cC
Q 018072          273 TG  274 (361)
Q Consensus       273 ~g  274 (361)
                      ++
T Consensus        87 a~   88 (363)
T d2c5aa1          87 AA   88 (363)
T ss_dssp             CC
T ss_pred             cc
Confidence            74

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=91.23  E-value=0.091  Score=42.44  Aligned_cols=32  Identities=25%  Similarity=0.343  Sum_probs=28.2

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  230 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~  230 (361)
                      -|+|+|+|+.|+.++..+..+|. +|++++..+
T Consensus         5 DvvVIGgGpaGl~aA~~aa~~G~-kV~vie~~~   36 (221)
T d1dxla1           5 DVVIIGGGPGGYVAAIKAAQLGF-KTTCIEKRG   36 (221)
T ss_dssp             CEEEECCSHHHHHHHHHHHHHTC-CEEEEECSS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-cEEEEEecC
Confidence            47889999999999999999998 888887753

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=91.19  E-value=0.088  Score=41.23  Aligned_cols=31  Identities=29%  Similarity=0.259  Sum_probs=27.3

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  229 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~  229 (361)
                      .|+|+|+|+.|+.|+..|...|. +|+.+++.
T Consensus         3 DViIIGgGpaGl~AAi~aar~G~-~v~iie~~   33 (184)
T d1fl2a1           3 DVLIVGSGPAGAAAAIYSARKGI-RTGLMGER   33 (184)
T ss_dssp             EEEEECCSHHHHHHHHHHHTTTC-CEEEECSS
T ss_pred             cEEEECcCHHHHHHHHHHHHcCC-eEEEEEEe
Confidence            48899999999999999999999 78888753

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=91.07  E-value=0.2  Score=41.30  Aligned_cols=90  Identities=19%  Similarity=0.210  Sum_probs=58.0

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHc-CCCccE
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT-NGGVDR  268 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~-~~g~Dv  268 (361)
                      .++.+||=+|+|. |..+..+++ .|. +|+++|.+++-++.+++    .|...-+...  +  +    .++. ++.||+
T Consensus        36 ~~~~~vLDiGCG~-G~~~~~l~~-~g~-~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~--d--~----~~~~~~~~fD~  104 (246)
T d1y8ca_          36 LVFDDYLDLACGT-GNLTENLCP-KFK-NTWAVDLSQEMLSEAENKFRSQGLKPRLACQ--D--I----SNLNINRKFDL  104 (246)
T ss_dssp             CCTTEEEEETCTT-STTHHHHGG-GSS-EEEEECSCHHHHHHHHHHHHHTTCCCEEECC--C--G----GGCCCSCCEEE
T ss_pred             CCCCeEEEEeCcC-CHHHHHHHH-hCC-ccEeeccchhhhhhccccccccCccceeecc--c--h----hhhcccccccc
Confidence            4457899999974 777777765 476 89999999998777754    3433222111  1  1    1122 347999


Q ss_pred             EEEccC------ChH----HHHHHHHHhcCCCcEEEE
Q 018072          269 SVECTG------NID----NMISAFECVHDGWGVAVL  295 (361)
Q Consensus       269 vid~~g------~~~----~~~~~~~~l~~~~G~iv~  295 (361)
                      |+...+      .++    .+..+.+.|+++ |.+++
T Consensus       105 i~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G~~i~  140 (246)
T d1y8ca_         105 ITCCLDSTNYIIDSDDLKKYFKAVSNHLKEG-GVFIF  140 (246)
T ss_dssp             EEECTTGGGGCCSHHHHHHHHHHHHTTEEEE-EEEEE
T ss_pred             cceeeeeeeccCCHHHHHHHHHHHHHhCCCC-eEEEE
Confidence            986422      222    466777788997 98874

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.06  E-value=0.08  Score=45.66  Aligned_cols=31  Identities=23%  Similarity=0.328  Sum_probs=27.3

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcC
Q 018072          197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDR  228 (361)
Q Consensus       197 ~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~  228 (361)
                      .+|||+|+ |.+|...+..+...|. .|+++++
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~-~V~~~d~   33 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGH-EVTVVDN   33 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeC
Confidence            57999998 9999999998888898 8999875

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=91.06  E-value=0.07  Score=44.74  Aligned_cols=32  Identities=38%  Similarity=0.472  Sum_probs=28.7

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  230 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~  230 (361)
                      +|+|+|+|+.|+.++..+...|. +|+++++++
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~-~V~vlE~~~   33 (347)
T d2ivda1           2 NVAVVGGGISGLAVAHHLRSRGT-DAVLLESSA   33 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHTTTC-CEEEECSSS
T ss_pred             eEEEECCCHHHHHHHHHHHhCCC-CEEEEecCC
Confidence            58999999999999999999999 899998754

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=91.04  E-value=0.11  Score=45.00  Aligned_cols=35  Identities=14%  Similarity=0.268  Sum_probs=30.8

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChh
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK  231 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~  231 (361)
                      ..+|+|+|||..|+.++..+...|. +|++++.++.
T Consensus         2 ~KKI~IIGaG~sGL~aA~~L~k~G~-~V~viEk~~~   36 (314)
T d2bi7a1           2 SKKILIVGAGFSGAVIGRQLAEKGH-QVHIIDQRDH   36 (314)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSSS
T ss_pred             CCEEEEECCcHHHHHHHHHHHhCCC-CEEEEECCCC
Confidence            4689999999999999999888898 9999988764

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=91.04  E-value=0.11  Score=42.67  Aligned_cols=36  Identities=28%  Similarity=0.266  Sum_probs=31.1

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhH
Q 018072          197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRF  233 (361)
Q Consensus       197 ~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~  233 (361)
                      +++||+|+ +++|.+.++.+...|+ +|+.+++++++.
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~~   38 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGY-RVVVLDLRREGE   38 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCCSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCcccc
Confidence            57788888 8999999999999999 899999887643

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=91.00  E-value=0.39  Score=35.40  Aligned_cols=89  Identities=18%  Similarity=0.262  Sum_probs=55.8

Q ss_pred             CCCEEEEEcCCHH-----------HHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcC
Q 018072          195 RGSSVAVFGLGAV-----------GLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTN  263 (361)
Q Consensus       195 ~g~~VlI~G~g~v-----------G~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~  263 (361)
                      .-.+|||+|+|+.           +..++..++..|. +++.+..|++....-.++ +++++...-..+.+.+.++.   
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~-~~iliN~NP~TVstd~d~-aD~lYfePlt~e~v~~Ii~~---   80 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGY-RVINVNSNPATIMTDPEM-ADATYIEPIHWEVVRKIIEK---   80 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTC-EEEEECSCTTCGGGCGGG-SSEEECSCCCHHHHHHHHHH---
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCC-eEEEecCchHhhhcChhh-cceeeeecCCHHHHHHHHHH---
Confidence            3478999998763           3445555566788 899999998865443222 34555433322223333322   


Q ss_pred             CCccEEEEccCChHHHHHHHHHhcC
Q 018072          264 GGVDRSVECTGNIDNMISAFECVHD  288 (361)
Q Consensus       264 ~g~Dvvid~~g~~~~~~~~~~~l~~  288 (361)
                      ++.|.|+-..|++..+..+.++...
T Consensus        81 E~pd~il~~~GGQtalnla~~L~~~  105 (127)
T d1a9xa3          81 ERPDAVLPTMGGQTALNCALELERQ  105 (127)
T ss_dssp             HCCSEEECSSSHHHHHHHHHHHHHT
T ss_pred             hCcCCeEEEeeeehHhHHHHHHHHc
Confidence            2789999999997777777766543

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.99  E-value=0.26  Score=39.97  Aligned_cols=99  Identities=13%  Similarity=-0.012  Sum_probs=63.2

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcC----CCEEEcCCCCCccHHHHHHHHcCCCc
Q 018072          191 AKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG----VTDFVNTSEHDRPIQEVIAEMTNGGV  266 (361)
Q Consensus       191 ~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G----~~~vv~~~~~~~~~~~~i~~~~~~g~  266 (361)
                      ....++.+||=+|+|. |..+..+++..+. +|+++|.+++-++.+++..    ...+ .+...+  +.+ + ...++.|
T Consensus        56 ~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~~vD~s~~~l~~ak~~~~~~~~~~~-~f~~~d--~~~-~-~~~~~~f  128 (222)
T d2ex4a1          56 PNKTGTSCALDCGAGI-GRITKRLLLPLFR-EVDMVDITEDFLVQAKTYLGEEGKRVR-NYFCCG--LQD-F-TPEPDSY  128 (222)
T ss_dssp             --CCCCSEEEEETCTT-THHHHHTTTTTCS-EEEEEESCHHHHHHHHHHTGGGGGGEE-EEEECC--GGG-C-CCCSSCE
T ss_pred             cCCCCCCEEEEeccCC-CHhhHHHHHhcCC-EEEEeecCHHHhhcccccccccccccc-cccccc--ccc-c-ccccccc
Confidence            3456778999999876 7777777655554 8999999999998887642    2221 111111  100 0 0122379


Q ss_pred             cEEEEcc-----CCh---HHHHHHHHHhcCCCcEEEEEc
Q 018072          267 DRSVECT-----GNI---DNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       267 Dvvid~~-----g~~---~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      |+|+..-     ..+   ..+..+.+.|+++ |.+++.-
T Consensus       129 D~I~~~~~l~h~~~~~~~~~l~~i~~~Lk~~-G~~~i~~  166 (222)
T d2ex4a1         129 DVIWIQWVIGHLTDQHLAEFLRRCKGSLRPN-GIIVIKD  166 (222)
T ss_dssp             EEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             cccccccccccchhhhhhhHHHHHHHhcCCc-ceEEEEE
Confidence            9999732     222   3577888899997 9988764

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=90.89  E-value=0.51  Score=36.65  Aligned_cols=95  Identities=22%  Similarity=0.318  Sum_probs=59.0

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEE-cC-ChhhHHHHHHc----CC---CE-------EE-----c-CCCCCccHH
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGV-DR-SSKRFEEAKKF----GV---TD-------FV-----N-TSEHDRPIQ  255 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~-~~-~~~~~~~~~~~----G~---~~-------vv-----~-~~~~~~~~~  255 (361)
                      +|.|.|-|-+|.+..+.+...+. .|+++ +. +.+.+.++-++    |-   +.       .+     . +...+    
T Consensus         2 kigINGfGRIGR~~~R~l~~~~i-~iv~INd~~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~----   76 (168)
T d2g82a1           2 KVGINGFGRIGRQVFRILHSRGV-EVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKD----   76 (168)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTC-CEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSS----
T ss_pred             EEEEECCcHHHHHHHHHHhcCCC-EEEEECCCcchhhhhheeecccccCccccccccccceeEecceeEEEEecCC----
Confidence            58899999999999998888888 66665 22 22344444442    21   10       01     0 11111    


Q ss_pred             HHHHHHcCC--CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072          256 EVIAEMTNG--GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       256 ~~i~~~~~~--g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                        ..++...  ++|+|+||+|.-...+.+...+..+ -+=|+++.+.
T Consensus        77 --p~~i~W~~~gvdiViEcTG~f~~~~~~~~hl~~g-akkViiSAP~  120 (168)
T d2g82a1          77 --PKEIPWAEAGVGVVIESTGVFTDADKAKAHLEGG-AKKVIITAPA  120 (168)
T ss_dssp             --GGGCCTGGGTEEEEEECSSSCCBHHHHTHHHHTT-CSEEEESSCC
T ss_pred             --hHHCcccccCCceeEeccccccchHHhhhhhccc-cceeeecccc
Confidence              1111212  7999999999877778888888875 5556666554

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

Probab=90.88  E-value=0.91  Score=38.69  Aligned_cols=99  Identities=18%  Similarity=0.156  Sum_probs=65.5

Q ss_pred             hhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcC--ChhhHHHHHHcCCCEEEcCCCC----------------
Q 018072          189 NVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDR--SSKRFEEAKKFGVTDFVNTSEH----------------  250 (361)
Q Consensus       189 ~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~--~~~~~~~~~~~G~~~vv~~~~~----------------  250 (361)
                      +...+.++.+|+...+|.-|++++..|+..|..-++++..  ++.|.+.++.+|+..+......                
T Consensus        54 ~~g~~~~~~~vv~~SsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~vv~~~~~~~~~~~~~~~~~~~~~~  133 (310)
T d1y7la1          54 KDGTLTKGKEIVDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAKGMKGAIAKAEEIVASD  133 (310)
T ss_dssp             HTTSSCTTCEEEESCCSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHC
T ss_pred             HcCCCCCCceeeeecCCCchHHHHHHHHHhhccccccchhhhhhhhhhhHHHhCCceEeccCccccchhhHHHHHHHHhh
Confidence            3455677877766677999999999999999866666644  4568888889999766422110                


Q ss_pred             -----------C-c-------cHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhc
Q 018072          251 -----------D-R-------PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH  287 (361)
Q Consensus       251 -----------~-~-------~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~  287 (361)
                                 + .       .....+.+..++.+|.++.++|+...+.-....++
T Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~a~Ei~~~~~~~~d~vv~~~G~Gg~~~G~~~~lk  189 (310)
T d1y7la1         134 PSRYVMLKQFENPANPQIHRETTGPEIWKDTDGKVDVVVAGVGTGGSITGISRAIK  189 (310)
T ss_dssp             TTTEECCCTTTCTHHHHHHHHTHHHHHHHHTTTCEEEEEEECSSSHHHHHHHHHHH
T ss_pred             cCccccCCCCcchhhHHHhhhhHHHHHHHhcCCCCCEEEecCcCCcchhHHHHHHH
Confidence                       0 0       01222333334468999999988676665555554

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=90.86  E-value=0.052  Score=43.16  Aligned_cols=35  Identities=23%  Similarity=0.253  Sum_probs=29.9

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  230 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~  230 (361)
                      ++..|+|+|+|+.|+.|+..|.+.|. +|+.+++..
T Consensus         4 k~~dVvIIGGGpaGl~AA~~~ar~g~-~v~iie~~~   38 (190)
T d1trba1           4 KHSKLLILGSGPAGYTAAVYAARANL-QPVLITGME   38 (190)
T ss_dssp             EEEEEEEECCSHHHHHHHHHHHTTTC-CCEEECCSS
T ss_pred             CCCcEEEECCCHHHHHHHHHHHHcCC-ceEEEEeec
Confidence            45679999999999999999999999 788887544

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=90.80  E-value=1.2  Score=33.64  Aligned_cols=95  Identities=14%  Similarity=0.284  Sum_probs=61.6

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcC--CCeEEEEcCChhh---HHHHHHcCCCEEEcCCCCC-ccHH---------------
Q 018072          198 SVAVFGL-GAVGLAAAEGARIAG--ASRIIGVDRSSKR---FEEAKKFGVTDFVNTSEHD-RPIQ---------------  255 (361)
Q Consensus       198 ~VlI~G~-g~vG~~a~~~a~~~g--~~~Vi~~~~~~~~---~~~~~~~G~~~vv~~~~~~-~~~~---------------  255 (361)
                      +|.|+|+ |.+|..++.+.+...  + +|++...+..-   .+++++|.+..++..+... ..+.               
T Consensus         3 ~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~~~~~~l~~~l~~~~~~~~~~~g   81 (151)
T d1q0qa2           3 QLTILGSTGSIGCSTLDVVRHNPEHF-RVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSG   81 (151)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTTE-EEEEEEESSCHHHHHHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCCCEEEES
T ss_pred             eEEEEcCCcHHHHHHHHHHHhCCCCc-EEEEEEecCcHHHHHHHHHHHhhcccccccHHHHHHHHHHhhhhccccccccC
Confidence            6899998 999999999999873  4 67776555432   3445668887766544321 0111               


Q ss_pred             -HHHHHHcCC-CccEEEEccCChHHHHHHHHHhcCCCcEEE
Q 018072          256 -EVIAEMTNG-GVDRSVECTGNIDNMISAFECVHDGWGVAV  294 (361)
Q Consensus       256 -~~i~~~~~~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv  294 (361)
                       +.+.++... .+|+|+.+..+-..+...+..++.+ -++.
T Consensus        82 ~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~g-k~ia  121 (151)
T d1q0qa2          82 QQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAG-KTIL  121 (151)
T ss_dssp             HHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTT-CEEE
T ss_pred             hHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcC-CeEE
Confidence             122222222 6788888877778888888888874 4433

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.67  E-value=0.12  Score=44.23  Aligned_cols=44  Identities=23%  Similarity=0.240  Sum_probs=33.2

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChh--hHHHHHHcCC
Q 018072          197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSK--RFEEAKKFGV  241 (361)
Q Consensus       197 ~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~--~~~~~~~~G~  241 (361)
                      .+|||+|+ |.+|...+..+...|. +|+++++...  ..+.++.++.
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~l~~~~~   47 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELGI   47 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcccHHHHHHhcc
Confidence            47999998 9999999998888898 8999987542  2344444444

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=90.63  E-value=0.21  Score=41.42  Aligned_cols=97  Identities=20%  Similarity=0.148  Sum_probs=59.5

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHH-cCCCcc
Q 018072          193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEM-TNGGVD  267 (361)
Q Consensus       193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~-~~~g~D  267 (361)
                      ++++++||=+|+|. |..+..+++. |...|+++|.+++.++.+++    .+...-+.....+  ..  -..+ .++.||
T Consensus        22 ~~~~~~VLDlGCG~-G~~~~~~~~~-~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D--~~--~~~~~~~~~fD   95 (252)
T d1ri5a_          22 TKRGDSVLDLGCGK-GGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQD--SY--GRHMDLGKEFD   95 (252)
T ss_dssp             CCTTCEEEEETCTT-TTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESC--TT--TSCCCCSSCEE
T ss_pred             CCCcCEEEEecccC-cHHHHHHHHc-CCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcc--hh--hhcccccccce
Confidence            57899999999876 5556667665 54489999999998888864    3332111111111  00  0001 123799


Q ss_pred             EEEEccC------Ch----HHHHHHHHHhcCCCcEEEEE
Q 018072          268 RSVECTG------NI----DNMISAFECVHDGWGVAVLV  296 (361)
Q Consensus       268 vvid~~g------~~----~~~~~~~~~l~~~~G~iv~~  296 (361)
                      +|+..-.      +.    ..+..+.+.|+++ |.++..
T Consensus        96 ~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lk~g-G~~i~~  133 (252)
T d1ri5a_          96 VISSQFSFHYAFSTSESLDIAQRNIARHLRPG-GYFIMT  133 (252)
T ss_dssp             EEEEESCGGGGGSSHHHHHHHHHHHHHTEEEE-EEEEEE
T ss_pred             EEEEcceeeecCCCHHHHHHHHHHHhceeCCC-CEEEEE
Confidence            9986432      21    2455667889997 998764

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=90.57  E-value=0.43  Score=40.23  Aligned_cols=98  Identities=15%  Similarity=0.169  Sum_probs=65.6

Q ss_pred             cCCCCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcCCC
Q 018072          191 AKPERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGG  265 (361)
Q Consensus       191 ~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~~g  265 (361)
                      .++.++.+||=+|+|. |..+..+++..+. .+|+++|.+++.++.+++    .+....+...+.. ++      ..++.
T Consensus        23 ~~~~~~~~ILDiGcG~-G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d~~-~~------~~~~~   94 (281)
T d2gh1a1          23 WKITKPVHIVDYGCGY-GYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDAT-EI------ELNDK   94 (281)
T ss_dssp             SCCCSCCEEEEETCTT-THHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEESCTT-TC------CCSSC
T ss_pred             hccCCcCEEEEecCcC-CHHHHHHHHhCCCCCEEEEEecchhHhhhhhcccccccccccccccccc-cc------cccCC
Confidence            3567788999999975 8888888887642 389999999998887765    3433222111111 00      01237


Q ss_pred             ccEEEEcc-----CC-hHHHHHHHHHhcCCCcEEEEEc
Q 018072          266 VDRSVECT-----GN-IDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       266 ~Dvvid~~-----g~-~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      ||+|+..-     .. ...+..+.+.|+++ |.++..-
T Consensus        95 fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg-G~lii~~  131 (281)
T d2gh1a1          95 YDIAICHAFLLHMTTPETMLQKMIHSVKKG-GKIICFE  131 (281)
T ss_dssp             EEEEEEESCGGGCSSHHHHHHHHHHTEEEE-EEEEEEE
T ss_pred             ceEEEEehhhhcCCCHHHHHHHHHHHcCcC-cEEEEEE
Confidence            99998753     22 23678899999997 9988753

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=90.56  E-value=0.063  Score=47.48  Aligned_cols=31  Identities=16%  Similarity=0.314  Sum_probs=26.3

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcC
Q 018072          198 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDR  228 (361)
Q Consensus       198 ~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~  228 (361)
                      +|||+|+ |.+|...+..+...|...|++++.
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~   33 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDK   33 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeC
Confidence            6999988 999999999888888866777764

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=90.55  E-value=0.24  Score=37.95  Aligned_cols=42  Identities=19%  Similarity=0.181  Sum_probs=34.5

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHH
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE  235 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~  235 (361)
                      ++-.+|.|+|+|.+|...+.++...+...++.+|.++++.+-
T Consensus         5 ~k~~KI~IIGaG~VG~~lA~~l~~~~~~el~L~D~~~~~~~g   46 (154)
T d1pzga1           5 QRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEG   46 (154)
T ss_dssp             SCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHH
T ss_pred             cCCCcEEEECCCHHHHHHHHHHHhCCCceEEEEEeccccchh
Confidence            456789999999999988888888887689999998876443

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=90.54  E-value=0.43  Score=39.65  Aligned_cols=101  Identities=12%  Similarity=-0.035  Sum_probs=66.5

Q ss_pred             hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHc-CCCEEEcCCCCCccHHHHHHHH--cCC
Q 018072          188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKF-GVTDFVNTSEHDRPIQEVIAEM--TNG  264 (361)
Q Consensus       188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~-G~~~vv~~~~~~~~~~~~i~~~--~~~  264 (361)
                      .+.....++.+||=+|+|. |..+..++..... .|++++.+++-++.+++. .....+++...+  +    .++  .++
T Consensus        86 l~~l~~~~~~~vLD~GcG~-G~~t~~ll~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~d--~----~~~~~~~~  157 (254)
T d1xtpa_          86 IASLPGHGTSRALDCGAGI-GRITKNLLTKLYA-TTDLLEPVKHMLEEAKRELAGMPVGKFILAS--M----ETATLPPN  157 (254)
T ss_dssp             HHTSTTCCCSEEEEETCTT-THHHHHTHHHHCS-EEEEEESCHHHHHHHHHHTTTSSEEEEEESC--G----GGCCCCSS
T ss_pred             HhhCCCCCCCeEEEecccC-ChhhHHHHhhcCc-eEEEEcCCHHHHHhhhccccccccceeEEcc--c----cccccCCC
Confidence            3445556778999999876 7888888776555 899999999999988763 222222222221  1    112  223


Q ss_pred             CccEEEEccC-----Ch---HHHHHHHHHhcCCCcEEEEEc
Q 018072          265 GVDRSVECTG-----NI---DNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       265 g~Dvvid~~g-----~~---~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      .||+|+..--     .+   ..+..+.+.|+++ |.+++.-
T Consensus       158 ~fD~I~~~~vl~hl~d~d~~~~l~~~~~~Lkpg-G~iii~e  197 (254)
T d1xtpa_         158 TYDLIVIQWTAIYLTDADFVKFFKHCQQALTPN-GYIFFKE  197 (254)
T ss_dssp             CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             ccceEEeeccccccchhhhHHHHHHHHHhcCCC-cEEEEEe
Confidence            7999987432     22   3467888899997 9988753

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=90.51  E-value=0.4  Score=38.33  Aligned_cols=74  Identities=24%  Similarity=0.304  Sum_probs=48.5

Q ss_pred             hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCC-EEEcCCCCCccHHHHHHHHcCCCc
Q 018072          188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVT-DFVNTSEHDRPIQEVIAEMTNGGV  266 (361)
Q Consensus       188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~-~vv~~~~~~~~~~~~i~~~~~~g~  266 (361)
                      ....++ .|++||=+|+|. |.+++. |...|+.+|+++|.+++..+.+++.-.. .++..+     +    .. .++.|
T Consensus        42 ~~~~dl-~Gk~VLDlGcGt-G~l~i~-a~~~ga~~V~~vDid~~a~~~ar~N~~~~~~~~~D-----~----~~-l~~~f  108 (197)
T d1ne2a_          42 YNDGNI-GGRSVIDAGTGN-GILACG-SYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVAD-----V----SE-ISGKY  108 (197)
T ss_dssp             HHHTSS-BTSEEEEETCTT-CHHHHH-HHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEECC-----G----GG-CCCCE
T ss_pred             HHcCCC-CCCEEEEeCCCC-cHHHHH-HHHcCCCcccccccCHHHHHHHHHccccccEEEEe-----h----hh-cCCcc
Confidence            344555 589999998864 555543 4456777899999999999998874332 232221     1    11 23589


Q ss_pred             cEEEEccC
Q 018072          267 DRSVECTG  274 (361)
Q Consensus       267 Dvvid~~g  274 (361)
                      |+||-...
T Consensus       109 D~Vi~NPP  116 (197)
T d1ne2a_         109 DTWIMNPP  116 (197)
T ss_dssp             EEEEECCC
T ss_pred             eEEEeCcc
Confidence            99997644

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=90.48  E-value=0.13  Score=44.29  Aligned_cols=34  Identities=26%  Similarity=0.300  Sum_probs=30.0

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChh
Q 018072          197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK  231 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~  231 (361)
                      -.|+|+|||+.|++++..++..|. .|++++++++
T Consensus         8 ~dV~IIGAG~sGl~~a~~L~~~G~-~v~i~Ek~~~   41 (298)
T d1w4xa1           8 VDVLVVGAGFSGLYALYRLRELGR-SVHVIETAGD   41 (298)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred             CCEEEECccHHHHHHHHHHHhCCC-CEEEEEcCCC
Confidence            368999999999999999999999 8999988754

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=90.27  E-value=0.19  Score=42.38  Aligned_cols=37  Identities=22%  Similarity=0.179  Sum_probs=27.3

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcC-ChhhHHH
Q 018072          198 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDR-SSKRFEE  235 (361)
Q Consensus       198 ~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~-~~~~~~~  235 (361)
                      .+||+|+ +++|.+.++.+...|+ +|+.+++ ++++.+.
T Consensus         4 VAlITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~~   42 (284)
T d1e7wa_           4 VALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANA   42 (284)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCCHHHHHH
Confidence            3567787 8999999999999999 7776544 4444443

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=90.27  E-value=0.19  Score=39.99  Aligned_cols=39  Identities=23%  Similarity=0.243  Sum_probs=33.1

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK  238 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~  238 (361)
                      +|.|+|.|-+|+..+.++ +.|. .|+++|.++++.+.+++
T Consensus         2 kI~ViGlG~vGl~~a~~~-a~g~-~V~g~Din~~~v~~l~~   40 (196)
T d1dlja2           2 KIAVAGSGYVGLSLGVLL-SLQN-EVTIVDILPSKVDKINN   40 (196)
T ss_dssp             EEEEECCSHHHHHHHHHH-TTTS-EEEEECSCHHHHHHHHT
T ss_pred             EEEEECCChhHHHHHHHH-HCCC-cEEEEECCHHHHHHHhh
Confidence            588999999999877655 4688 99999999999888764

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=90.24  E-value=0.92  Score=35.56  Aligned_cols=107  Identities=21%  Similarity=0.260  Sum_probs=66.7

Q ss_pred             hhcCCCCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCcc
Q 018072          189 NVAKPERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVD  267 (361)
Q Consensus       189 ~~~~~~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~D  267 (361)
                      +...+++|..+ |-+. |.=|+.. .++.. +. +|+++|++++.++.+++.-...+..+...-.++.+.+..+..+.+|
T Consensus        12 ~~l~~~~g~~~-vD~T~G~GGhs~-~iL~~-~~-~viaiD~D~~ai~~a~~~~~~~~~~~~~~f~~~~~~l~~~~~~~vd   87 (182)
T d1wg8a2          12 DLLAVRPGGVY-VDATLGGAGHAR-GILER-GG-RVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKRHLAALGVERVD   87 (182)
T ss_dssp             HHHTCCTTCEE-EETTCTTSHHHH-HHHHT-TC-EEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHHHHHHTTCSCEE
T ss_pred             HhcCCCCCCEE-EEeCCCCcHHHH-HHhcc-cC-cEEEEhhhhhHHHHHhhccccceeEeehHHHHHHHHHHHcCCCccC
Confidence            34567888864 5444 5545543 34443 44 8999999999998888753332222222212266665555445788


Q ss_pred             EEEEccCChH---------------HHHHHHHHhcCCCcEEEEEcCCC
Q 018072          268 RSVECTGNID---------------NMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       268 vvid~~g~~~---------------~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      .|+=-.|-..               .++.+.+.++++ |+++.+....
T Consensus        88 gIl~DLGvSs~qld~~~re~~~~~~~L~~~~~~lk~g-g~~~ii~fhs  134 (182)
T d1wg8a2          88 GILADLGVSSFHLDDPSDELNALKEFLEQAAEVLAPG-GRLVVIAFHS  134 (182)
T ss_dssp             EEEEECSCCHHHHHCGGTHHHHHHHHHHHHHHHEEEE-EEEEEEECSH
T ss_pred             EEEEEccCCHHHhhcchHHHHHHHHHHHHHHhhhCCC-CeEEEEeccc
Confidence            7775455322               367888899997 9998887644

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=90.17  E-value=1.1  Score=32.57  Aligned_cols=91  Identities=9%  Similarity=0.077  Sum_probs=60.6

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCChH
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNID  277 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~~  277 (361)
                      .++|+|.|.+|...++.++  +. .|++++.++++.+.++..|...+. -+..+   .+.++...=..++.++-++..+.
T Consensus         2 HivI~G~g~~g~~l~~~L~--~~-~i~vi~~d~~~~~~~~~~~~~~i~-Gd~~~---~~~L~~a~i~~A~~vi~~~~~d~   74 (129)
T d2fy8a1           2 HVVICGWSESTLECLRELR--GS-EVFVLAEDENVRKKVLRSGANFVH-GDPTR---VSDLEKANVRGARAVIVNLESDS   74 (129)
T ss_dssp             CEEEESCCHHHHHHHHTSC--GG-GEEEEESCTTHHHHHHHTTCEEEE-SCTTS---HHHHHHTTCTTCSEEEECCSSHH
T ss_pred             EEEEECCCHHHHHHHHHHc--CC-CCEEEEcchHHHHHHHhcCccccc-cccCC---HHHHHHhhhhcCcEEEEeccchh
Confidence            5788999999998877664  43 678889999999999888875543 23222   23454443337889998887744


Q ss_pred             H---HHHHHHHhcCCCcEEEEE
Q 018072          278 N---MISAFECVHDGWGVAVLV  296 (361)
Q Consensus       278 ~---~~~~~~~l~~~~G~iv~~  296 (361)
                      .   .....+.+.+. .+++..
T Consensus        75 ~n~~~~~~~r~~~~~-~~iia~   95 (129)
T d2fy8a1          75 ETIHCILGIRKIDES-VRIIAE   95 (129)
T ss_dssp             HHHHHHHHHHHHCSS-SCEEEE
T ss_pred             hhHHHHHHHHHHCCC-ceEEEE
Confidence            2   23444556665 555544

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=90.00  E-value=0.12  Score=41.63  Aligned_cols=31  Identities=19%  Similarity=0.308  Sum_probs=27.8

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  229 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~  229 (361)
                      .|+|+|+|+.|+.++..|..+|. +|+.++++
T Consensus         4 DvvVIG~G~aG~~aA~~a~~~G~-kV~iiE~~   34 (217)
T d1gesa1           4 DYIAIGGGSGGIASINRAAMYGQ-KCALIEAK   34 (217)
T ss_dssp             EEEEECCSHHHHHHHHHHHTTTC-CEEEEESS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-EEEEEecc
Confidence            37899999999999999999998 89988875

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.99  E-value=0.14  Score=41.51  Aligned_cols=32  Identities=28%  Similarity=0.355  Sum_probs=27.8

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  230 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~  230 (361)
                      .|+|+|+|+.|+.|+..|..+|. +|+.++..+
T Consensus         7 DviVIG~GpAGl~aA~~aa~~G~-kV~lie~~~   38 (233)
T d1v59a1           7 DVVIIGGGPAGYVAAIKAAQLGF-NTACVEKRG   38 (233)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-cEEEEEecC
Confidence            47889999999999999999999 888887654

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=89.90  E-value=0.15  Score=41.01  Aligned_cols=31  Identities=29%  Similarity=0.378  Sum_probs=27.4

Q ss_pred             EEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 018072          199 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  230 (361)
Q Consensus       199 VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~  230 (361)
                      |+|+|+|+.|+.++..|.+.|. +|+.+++..
T Consensus         6 viVIG~GpaGl~aA~~aar~G~-kV~vIEk~~   36 (223)
T d1ebda1           6 TLVVGAGPGGYVAAIRAAQLGQ-KVTIVEKGN   36 (223)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESSC
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-EEEEEecCC
Confidence            7888999999999999999998 888887653

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=89.89  E-value=0.21  Score=36.49  Aligned_cols=36  Identities=25%  Similarity=0.358  Sum_probs=31.4

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  230 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~  230 (361)
                      +.+.+++|+|+|.+|+-+++.+..+|. +|+.+++.+
T Consensus        30 ~~~~~vvIiGgG~iG~E~A~~l~~~g~-~Vtlv~~~~   65 (122)
T d1xhca2          30 ENSGEAIIIGGGFIGLELAGNLAEAGY-HVKLIHRGA   65 (122)
T ss_dssp             HHHSEEEEEECSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             hcCCcEEEECCcHHHHHHHHHhhcccc-eEEEEeccc
Confidence            345789999999999999999999998 899887764

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=89.80  E-value=0.15  Score=41.47  Aligned_cols=32  Identities=34%  Similarity=0.389  Sum_probs=28.5

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  230 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~  230 (361)
                      -|+|+|+||.|+.|+..|..+|. +|+.+++.+
T Consensus         8 DviIIG~GPaGlsaA~~aa~~G~-~V~viE~~~   39 (229)
T d1ojta1           8 DVVVLGGGPGGYSAAFAAADEGL-KVAIVERYK   39 (229)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-eEEEEeccC
Confidence            47888999999999999999999 899998754

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=89.61  E-value=0.34  Score=37.54  Aligned_cols=76  Identities=18%  Similarity=0.280  Sum_probs=55.7

Q ss_pred             CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEc
Q 018072          194 ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  272 (361)
Q Consensus       194 ~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~  272 (361)
                      -.|.+|+|+|. ..+|.-...++...|+ +|+.+.+....                     ..+.++     .+|+++-+
T Consensus        35 l~GK~v~VIGrS~~VG~Pla~lL~~~ga-tVt~~h~~t~~---------------------l~~~~~-----~ADivI~a   87 (166)
T d1b0aa1          35 TFGLNAVVIGASNIVGRPMSMELLLAGC-TTTVTHRFTKN---------------------LRHHVE-----NADLLIVA   87 (166)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHTTTC-EEEEECSSCSC---------------------HHHHHH-----HCSEEEEC
T ss_pred             cccceEEEEeccccccHHHHHHHHHhhc-cccccccccch---------------------hHHHHh-----hhhHhhhh
Confidence            46999999997 6899999999999998 88877544322                     222222     37999999


Q ss_pred             cCChHHHHHHHHHhcCCCcEEEEEcCC
Q 018072          273 TGNIDNMISAFECVHDGWGVAVLVGVP  299 (361)
Q Consensus       273 ~g~~~~~~~~~~~l~~~~G~iv~~g~~  299 (361)
                      +|.+..+.  -+.++++ ..++.+|..
T Consensus        88 ~G~p~~i~--~~~vk~g-~vvIDvGi~  111 (166)
T d1b0aa1          88 VGKPGFIP--GDWIKEG-AIVIDVGIN  111 (166)
T ss_dssp             SCCTTCBC--TTTSCTT-CEEEECCCE
T ss_pred             ccCccccc--ccccCCC-cEEEecCce
Confidence            99876654  2467776 788888864

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=89.58  E-value=0.53  Score=40.68  Aligned_cols=38  Identities=16%  Similarity=0.045  Sum_probs=29.6

Q ss_pred             CCEEEEEcCC---HHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 018072          196 GSSVAVFGLG---AVGLAAAEGARIAGASRIIGVDRSSKRFE  234 (361)
Q Consensus       196 g~~VlI~G~g---~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~  234 (361)
                      ++..||+|+|   ++|.+.++.+...|+ +|+.+.++.+...
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA-~V~i~~~~~~~~~   42 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNV-KIIFGIWPPVYNI   42 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEECGGGHHH
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCC-EEEEEeCchhhhh
Confidence            4567888953   899999999999999 8888877665433

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=89.54  E-value=0.15  Score=41.18  Aligned_cols=31  Identities=26%  Similarity=0.286  Sum_probs=28.1

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  229 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~  229 (361)
                      .++|+|+|+.|+.++..|..+|. +|+.++.+
T Consensus         7 DlvVIG~GpaGl~aA~~aa~~G~-~V~liE~~   37 (220)
T d1lvla1           7 TLLIIGGGPGGYVAAIRAGQLGI-PTVLVEGQ   37 (220)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTC-CEEEECSS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-cEEEEecC
Confidence            47889999999999999999999 89999865

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=89.45  E-value=0.33  Score=40.48  Aligned_cols=73  Identities=21%  Similarity=0.267  Sum_probs=46.0

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhh------HHHHHH---cCCCEEEcCCCCCccHHHHHHHHcCCCc
Q 018072          197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKR------FEEAKK---FGVTDFVNTSEHDRPIQEVIAEMTNGGV  266 (361)
Q Consensus       197 ~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~------~~~~~~---~G~~~vv~~~~~~~~~~~~i~~~~~~g~  266 (361)
                      .+|||+|+ |.+|...+..+...|. .|++++++...      ......   .+++ ++..+-.+  .......+.  +.
T Consensus         4 kKILVtGatG~iG~~l~~~L~~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~~--~~~~~~~~~--~~   77 (307)
T d1qyca_           4 SRILLIGATGYIGRHVAKASLDLGH-PTFLLVRESTASSNSEKAQLLESFKASGAN-IVHGSIDD--HASLVEAVK--NV   77 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCCCCTTTTHHHHHHHHHHHTTTCE-EECCCTTC--HHHHHHHHH--TC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCC-eEEEEECCCccccchhHHHHHHhhccCCcE-EEEeeccc--chhhhhhhh--hc
Confidence            57999998 9999999999988998 89999876532      222222   3333 33322222  222222222  57


Q ss_pred             cEEEEccCC
Q 018072          267 DRSVECTGN  275 (361)
Q Consensus       267 Dvvid~~g~  275 (361)
                      +.++++.+.
T Consensus        78 ~~vi~~~~~   86 (307)
T d1qyca_          78 DVVISTVGS   86 (307)
T ss_dssp             SEEEECCCG
T ss_pred             eeeeecccc
Confidence            888888764

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=89.43  E-value=0.63  Score=35.02  Aligned_cols=38  Identities=37%  Similarity=0.441  Sum_probs=31.8

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHH
Q 018072          197 SSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFE  234 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~  234 (361)
                      .+|.|+|+|.+|..++..+...+. ..++.+|.++++.+
T Consensus         2 ~Ki~IIGaG~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~   40 (143)
T d1llda1           2 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVE   40 (143)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccccch
Confidence            478999999999998888887775 68999999987653

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=89.42  E-value=0.12  Score=44.70  Aligned_cols=32  Identities=28%  Similarity=0.389  Sum_probs=26.2

Q ss_pred             EEEEEcCCHHHHHHHHHHH-----HcCCCeEEEEcCCh
Q 018072          198 SVAVFGLGAVGLAAAEGAR-----IAGASRIIGVDRSS  230 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~-----~~g~~~Vi~~~~~~  230 (361)
                      -|+|+|+|++|++++..+.     ..|. +|+++++.+
T Consensus         9 DV~IvGaG~aGl~lA~~La~~~~~~~G~-~v~vlEr~~   45 (360)
T d1pn0a1           9 DVLIVGAGPAGLMAARVLSEYVRQKPDL-KVRIIDKRS   45 (360)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHHHHSTTC-CEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHhcccccCCC-cEEEEcCCC
Confidence            4899999999999887763     4688 899998764

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=89.31  E-value=0.36  Score=36.78  Aligned_cols=40  Identities=13%  Similarity=0.090  Sum_probs=33.6

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFE  234 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~  234 (361)
                      |..+|.|+|+|.+|...+.++...+...++.+|.++++.+
T Consensus         2 p~~KI~IIGaG~VG~~~a~~l~~~~l~el~L~Di~~~~~~   41 (150)
T d1t2da1           2 PKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPH   41 (150)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHH
T ss_pred             CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEeccCCcce
Confidence            4568999999999998888888888889999999886643

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=89.25  E-value=0.17  Score=40.07  Aligned_cols=32  Identities=19%  Similarity=0.131  Sum_probs=27.5

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 018072          197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  229 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~  229 (361)
                      .+|+|+|+|+.|+.++..|.+.|. ++++++..
T Consensus         6 ~~VvIIGgGpaGl~aA~~~ar~g~-~v~vie~~   37 (192)
T d1vdca1           6 TRLCIVGSGPAAHTAAIYAARAEL-KPLLFEGW   37 (192)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTTC-CCEEECCS
T ss_pred             ceEEEECCCHHHHHHHHHHHHcCC-cEEEEEee
Confidence            579999999999999999999999 77777643

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=89.22  E-value=0.14  Score=43.94  Aligned_cols=33  Identities=12%  Similarity=0.341  Sum_probs=28.9

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChh
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK  231 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~  231 (361)
                      .|+|+|||..|+.++..+...|. +|.+++.++.
T Consensus         3 dv~IIGaG~sGl~~A~~L~~~g~-~V~iiEk~~~   35 (298)
T d1i8ta1           3 DYIIVGSGLFGAVCANELKKLNK-KVLVIEKRNH   35 (298)
T ss_dssp             EEEEECCSHHHHHHHHHHGGGTC-CEEEECSSSS
T ss_pred             cEEEECCcHHHHHHHHHHHhCCC-cEEEEECCCC
Confidence            48999999999999999888898 8999987653

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.10  E-value=0.15  Score=43.68  Aligned_cols=31  Identities=29%  Similarity=0.398  Sum_probs=27.9

Q ss_pred             EEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 018072          199 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  230 (361)
Q Consensus       199 VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~  230 (361)
                      |+|+|+|..|+.++..++..|. +|+++++++
T Consensus         2 ViVIGaG~aGL~aA~~L~~~G~-~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGGGISGMAAAKLLHDSGL-NVVVLEARD   32 (383)
T ss_dssp             EEEECCBHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             EEEECCCHHHHHHHHHHHhCCC-CEEEEecCC
Confidence            7899999999999999999998 899998654

>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=89.06  E-value=0.18  Score=40.54  Aligned_cols=30  Identities=27%  Similarity=0.335  Sum_probs=27.1

Q ss_pred             EEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 018072          199 VAVFGLGAVGLAAAEGARIAGASRIIGVDRS  229 (361)
Q Consensus       199 VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~  229 (361)
                      |+|+|+|+.|+.|+..|...|. +|+.++..
T Consensus         6 viIIGgGpAGl~aA~~aar~G~-~V~viE~~   35 (229)
T d3lada1           6 VIVIGAGPGGYVAAIKSAQLGL-KTALIEKY   35 (229)
T ss_dssp             EEEECCSHHHHHHHHHHHHHTC-CEEEEECC
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-eEEEEecc
Confidence            7888999999999999999998 89888764

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=88.99  E-value=1  Score=33.97  Aligned_cols=73  Identities=15%  Similarity=0.121  Sum_probs=45.4

Q ss_pred             CCCEEEEEcC--CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcCCCccE
Q 018072          195 RGSSVAVFGL--GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGGVDR  268 (361)
Q Consensus       195 ~g~~VlI~G~--g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dv  268 (361)
                      .|.+||=+++  |.+|+   .. ...|+.+|+.++.+++..+.+++    ++...-+..-..+  ..+.+. ...+.||+
T Consensus        14 ~g~~vlDl~~GtG~~~i---ea-~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D--~~~~l~-~~~~~fDi   86 (152)
T d2esra1          14 NGGRVLDLFAGSGGLAI---EA-VSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKME--AERAID-CLTGRFDL   86 (152)
T ss_dssp             CSCEEEEETCTTCHHHH---HH-HHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSC--HHHHHH-HBCSCEEE
T ss_pred             CCCeEEEcCCccCHHHH---HH-HHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhccc--cccccc-ccccccce
Confidence            5788887755  55555   32 34688899999999988777654    5664311112222  444443 34458999


Q ss_pred             EEEccC
Q 018072          269 SVECTG  274 (361)
Q Consensus       269 vid~~g  274 (361)
                      ||--.+
T Consensus        87 If~DPP   92 (152)
T d2esra1          87 VFLDPP   92 (152)
T ss_dssp             EEECCS
T ss_pred             eEechh
Confidence            997543

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=88.96  E-value=0.28  Score=38.75  Aligned_cols=84  Identities=25%  Similarity=0.360  Sum_probs=56.6

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      .|.+|.|+|.|.+|...+++++.+|. +|++.++.+..       +.....   . +  +.+.+     ...|+|+.++.
T Consensus        41 ~gk~vgIiG~G~IG~~va~~l~~~g~-~v~~~d~~~~~-------~~~~~~---~-~--l~ell-----~~sDiv~~~~p  101 (181)
T d1qp8a1          41 QGEKVAVLGLGEIGTRVGKILAALGA-QVRGFSRTPKE-------GPWRFT---N-S--LEEAL-----REARAAVCALP  101 (181)
T ss_dssp             TTCEEEEESCSTHHHHHHHHHHHTTC-EEEEECSSCCC-------SSSCCB---S-C--SHHHH-----TTCSEEEECCC
T ss_pred             cCceEEEeccccccccceeeeecccc-ccccccccccc-------cceeee---e-c--hhhhh-----hccchhhcccc
Confidence            57899999999999999999999999 99999876531       111110   1 1  22222     13688887664


Q ss_pred             C-hHHH----HHHHHHhcCCCcEEEEEcC
Q 018072          275 N-IDNM----ISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       275 ~-~~~~----~~~~~~l~~~~G~iv~~g~  298 (361)
                      - +++.    ...++.|+++ ..++.+|.
T Consensus       102 l~~~t~~li~~~~l~~mk~~-ailIN~~R  129 (181)
T d1qp8a1         102 LNKHTRGLVKYQHLALMAED-AVFVNVGR  129 (181)
T ss_dssp             CSTTTTTCBCHHHHTTSCTT-CEEEECSC
T ss_pred             cccccccccccceeeecccc-ceEEeccc
Confidence            2 2221    4677788886 88888763

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=88.79  E-value=0.22  Score=39.95  Aligned_cols=86  Identities=17%  Similarity=0.207  Sum_probs=57.1

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      .|.+|.|+|.|.+|...++.++..|. +|++.++...+...   ..    +...  +  +.+.+..     .|+|.-++.
T Consensus        44 ~~ktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~---~~----~~~~--~--l~~l~~~-----~D~v~~~~p  106 (199)
T d1dxya1          44 GQQTVGVMGTGHIGQVAIKLFKGFGA-KVIAYDPYPMKGDH---PD----FDYV--S--LEDLFKQ-----SDVIDLHVP  106 (199)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSSCC---TT----CEEC--C--HHHHHHH-----CSEEEECCC
T ss_pred             cceeeeeeecccccccccccccccce-eeeccCCccchhhh---cc----hhHH--H--HHHHHHh-----cccceeeec
Confidence            46899999999999999999999999 99999876442110   00    0111  1  3333322     577777654


Q ss_pred             -ChHH----HHHHHHHhcCCCcEEEEEcC
Q 018072          275 -NIDN----MISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       275 -~~~~----~~~~~~~l~~~~G~iv~~g~  298 (361)
                       .+++    =...++.|+++ ..++.++-
T Consensus       107 lt~~T~~li~~~~l~~mk~~-a~lIN~aR  134 (199)
T d1dxya1         107 GIEQNTHIINEAAFNLMKPG-AIVINTAR  134 (199)
T ss_dssp             CCGGGTTSBCHHHHHHSCTT-EEEEECSC
T ss_pred             ccccccccccHHHhhccCCc-eEEEeccc
Confidence             3232    24677888887 88888874

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=88.74  E-value=0.68  Score=33.65  Aligned_cols=86  Identities=13%  Similarity=0.045  Sum_probs=50.1

Q ss_pred             CCEEEEEcCCHH-----------HHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCC
Q 018072          196 GSSVAVFGLGAV-----------GLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG  264 (361)
Q Consensus       196 g~~VlI~G~g~v-----------G~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~  264 (361)
                      ..+|||+|+|+.           +..++..++..|. +++.+..|++....--. =+++++...-....+.+.++.   +
T Consensus         4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~-~~IliN~NPeTVstd~d-~aD~lYfeplt~e~v~~Ii~~---E   78 (121)
T d1a9xa4           4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGY-ETIMVNCNPETVSTDYD-TSDRLYFEPVTLEDVLEIVRI---E   78 (121)
T ss_dssp             SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTC-EEEEECCCTTSSTTSTT-SSSEEECCCCSHHHHHHHHHH---H
T ss_pred             CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCC-eEEEEecChhhhhcChh-hcCceEEccCCHHHHHHHHHH---h
Confidence            468999999753           3445555667788 88999898876543211 234444332221112222222   2


Q ss_pred             CccEEEEccCChHHHHHHHHHh
Q 018072          265 GVDRSVECTGNIDNMISAFECV  286 (361)
Q Consensus       265 g~Dvvid~~g~~~~~~~~~~~l  286 (361)
                      ++|.|+-..|++..+..+.++-
T Consensus        79 ~p~~ii~~~GGQtalnla~~L~  100 (121)
T d1a9xa4          79 KPKGVIVQYGGQTPLKLARALE  100 (121)
T ss_dssp             CCSEEECSSSTHHHHTTHHHHH
T ss_pred             CCCEEEeehhhhhHHHHHHHHH
Confidence            6788888888866555555443

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=88.72  E-value=0.42  Score=36.48  Aligned_cols=36  Identities=31%  Similarity=0.359  Sum_probs=30.9

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  229 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~  229 (361)
                      .-+++|+|+|+|.+|.=++..+.+.|++.|+.+.+.
T Consensus        43 ~~~~kVvVIGGGdtA~D~A~~a~r~GA~~V~vi~rr   78 (153)
T d1gtea3          43 SIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRK   78 (153)
T ss_dssp             CCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred             cCCCEEEEECCChhHHHHHHHHHHcCCcceeEEEeC
Confidence            456789999999999999999999999888887554

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=88.64  E-value=0.8  Score=37.05  Aligned_cols=94  Identities=17%  Similarity=0.179  Sum_probs=60.2

Q ss_pred             CEEEEEcCCHHHHH-HHHHHHHc-CCCeEEEEcCChhhHHHH-HHcCCC--EEEcCCCCCccHHHHHHHHcCCCccEEEE
Q 018072          197 SSVAVFGLGAVGLA-AAEGARIA-GASRIIGVDRSSKRFEEA-KKFGVT--DFVNTSEHDRPIQEVIAEMTNGGVDRSVE  271 (361)
Q Consensus       197 ~~VlI~G~g~vG~~-a~~~a~~~-g~~~Vi~~~~~~~~~~~~-~~~G~~--~vv~~~~~~~~~~~~i~~~~~~g~Dvvid  271 (361)
                      -+|.|+|+|.+|.- .+...+.. +.+-+.++++++++.+.. +++|.+  .+..+++    +.+.   +.+..+|+|+.
T Consensus        34 iriaiIG~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d----~~el---l~~~~iD~V~I  106 (221)
T d1h6da1          34 FGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSN----FDKI---AKDPKIDAVYI  106 (221)
T ss_dssp             EEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSS----GGGG---GGCTTCCEEEE
T ss_pred             EEEEEEcCcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccccccccCc----hhhh---cccccceeeee
Confidence            37899999999863 44443433 563344668888776554 557764  2333333    2211   22337999999


Q ss_pred             ccCChHHHHHHHHHhcCCCcEEEEEcCC
Q 018072          272 CTGNIDNMISAFECVHDGWGVAVLVGVP  299 (361)
Q Consensus       272 ~~g~~~~~~~~~~~l~~~~G~iv~~g~~  299 (361)
                      ++......+.+.++|..  |+=+++-.+
T Consensus       107 ~tp~~~H~~~~~~al~~--gk~v~~EKP  132 (221)
T d1h6da1         107 ILPNSLHAEFAIRAFKA--GKHVMCEKP  132 (221)
T ss_dssp             CSCGGGHHHHHHHHHHT--TCEEEECSS
T ss_pred             ccchhhhhhHHHHhhhc--chhhhcCCC
Confidence            99987778888888875  676777543

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=88.57  E-value=0.21  Score=41.62  Aligned_cols=32  Identities=19%  Similarity=0.135  Sum_probs=28.3

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  230 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~  230 (361)
                      .|+|+|+|.+|+.++..+...|. +|+++++++
T Consensus         6 DvvIIGaGi~Gls~A~~La~~G~-~V~vlE~~~   37 (276)
T d1ryia1           6 EAVVIGGGIIGSAIAYYLAKENK-NTALFESGT   37 (276)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence            48999999999999888888898 899998864

>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Histamine methyltransferase
domain: Histamine methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.52  E-value=0.46  Score=39.82  Aligned_cols=103  Identities=12%  Similarity=-0.001  Sum_probs=59.6

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHc-----CC-CeEEEEcCChhhHHHHHHcCC------CEEEcCCCCCccHHHHHH
Q 018072          192 KPERGSSVAVFGLGAVGLAAAEGARIA-----GA-SRIIGVDRSSKRFEEAKKFGV------TDFVNTSEHDRPIQEVIA  259 (361)
Q Consensus       192 ~~~~g~~VlI~G~g~vG~~a~~~a~~~-----g~-~~Vi~~~~~~~~~~~~~~~G~------~~vv~~~~~~~~~~~~i~  259 (361)
                      ..++..+||=+|+|. |.++..+++..     +. ..++++|.++.-++.+++.-.      ...++.....  +.+...
T Consensus        37 ~~~~~~~VLDiGcG~-G~~~~~ll~~l~~~~~~~~~~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~--~~~~~~  113 (280)
T d1jqea_          37 DTKSEIKILSIGGGA-GEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKISNLENVKFAWHKET--SSEYQS  113 (280)
T ss_dssp             TTCSEEEEEEETCTT-SHHHHHHHHHHHHHSTTCEEEEEEECCCHHHHHHHHHHHTTCCSCTTEEEEEECSC--HHHHHH
T ss_pred             cCCCCCeEEEEcCCC-CHHHHHHHHHhhhhccCCceEEEEEeCcHHHHHHHHHHHhhccccccccccchhhh--hhhhcc
Confidence            445666899998864 44444444332     22 157899999988888765211      1122222222  222211


Q ss_pred             ---H-HcCCCccEEEEc-----cCC-hHHHHHHHHHhcCCCcEEEEEcC
Q 018072          260 ---E-MTNGGVDRSVEC-----TGN-IDNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       260 ---~-~~~~g~Dvvid~-----~g~-~~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                         . ..++.||+|+-.     ... ...+..+.+.|+++ |.+++...
T Consensus       114 ~~~~~~~~~~fD~I~~~~~l~~~~d~~~~l~~l~~~Lkpg-G~l~i~~~  161 (280)
T d1jqea_         114 RMLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTN-AKMLIIVV  161 (280)
T ss_dssp             HHTTSSSCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEE-EEEEEEEE
T ss_pred             hhcccCCCCceeEEEEccceecCCCHHHHHHHHHhhCCCC-CEEEEEEe
Confidence               1 123379999873     223 34788999999997 98877643

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=88.35  E-value=0.24  Score=40.22  Aligned_cols=33  Identities=18%  Similarity=0.201  Sum_probs=27.4

Q ss_pred             EEEEEcCCHHHHHHHHHHHHc--CCCeEEEEcCChh
Q 018072          198 SVAVFGLGAVGLAAAEGARIA--GASRIIGVDRSSK  231 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~--g~~~Vi~~~~~~~  231 (361)
                      +|+|+|+|+.|+.|+..++..  |. .|++++..+.
T Consensus         3 kv~iIGaGpaGl~aA~~L~~~~~~~-~V~v~e~~~~   37 (230)
T d1cjca2           3 QICVVGSGPAGFYTAQHLLKHHSRA-HVDIYEKQLV   37 (230)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSSC-EEEEECSSSS
T ss_pred             eEEEECccHHHHHHHHHHHhcCCCC-eEEEEeCCCC
Confidence            799999999999999866654  55 8999988764

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.30  E-value=0.33  Score=43.82  Aligned_cols=33  Identities=24%  Similarity=0.387  Sum_probs=29.6

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 018072          197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  229 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~  229 (361)
                      .+|||+|+|++|..++..+.+.|..++..+|.+
T Consensus        38 ~kVlvvG~GglG~ei~k~L~~~Gvg~i~lvD~D   70 (426)
T d1yovb1          38 CKVLVIGAGGLGCELLKNLALSGFRQIHVIDMD   70 (426)
T ss_dssp             CCEEEECSSTTHHHHHHHHHTTTCCCEEEECCC
T ss_pred             CeEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence            579999999999999999989999899998765

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.24  E-value=0.23  Score=39.87  Aligned_cols=30  Identities=40%  Similarity=0.412  Sum_probs=27.1

Q ss_pred             EEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 018072          199 VAVFGLGAVGLAAAEGARIAGASRIIGVDRS  229 (361)
Q Consensus       199 VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~  229 (361)
                      |+|+|+|+.|+.++..|..+|. +|++++..
T Consensus         6 viIIG~GpaG~~aA~~aar~G~-kV~vIEk~   35 (221)
T d3grsa1           6 YLVIGGGSGGLASARRAAELGA-RAAVVESH   35 (221)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-EEEEEecc
Confidence            7888999999999999999998 89888764

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=87.96  E-value=1.2  Score=38.34  Aligned_cols=38  Identities=24%  Similarity=0.280  Sum_probs=31.7

Q ss_pred             CCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhH
Q 018072          195 RGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRF  233 (361)
Q Consensus       195 ~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~  233 (361)
                      +-.+|+|+|+ |.+|...+..+...|. +|+++.|+..+.
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~   40 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGH-HVRAQVHSLKGL   40 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCSCSH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCC-eEEEEECCcchh
Confidence            3468999998 9999999999988998 888887876543

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=87.94  E-value=0.2  Score=38.91  Aligned_cols=32  Identities=31%  Similarity=0.420  Sum_probs=26.4

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCC-eEEEE
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGAS-RIIGV  226 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~-~Vi~~  226 (361)
                      .+++|+|+|+|++|+-++..++.+|.+ +|+..
T Consensus         2 ~~~~VvIIGgG~~G~e~A~~l~~~g~~v~v~~~   34 (185)
T d1q1ra1           2 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLV   34 (185)
T ss_dssp             CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEE
T ss_pred             CCCCEEEECCcHHHHHHHHHHHHcCCceEEEEe
Confidence            468999999999999999999999973 34444

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=87.88  E-value=0.17  Score=41.10  Aligned_cols=35  Identities=17%  Similarity=0.124  Sum_probs=28.5

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCC------CeEEEEcCChh
Q 018072          197 SSVAVFGLGAVGLAAAEGARIAGA------SRIIGVDRSSK  231 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~g~------~~Vi~~~~~~~  231 (361)
                      .+|+|+|+|+.|+.|+..+...|.      ..|.+.++.+.
T Consensus         3 ~~VaVIGaGpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~~   43 (239)
T d1lqta2           3 YYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPT   43 (239)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSS
T ss_pred             cEEEEECcCHHHHHHHHHHHHcCCccccCCCceEEEecCCC
Confidence            489999999999999988877762      16889988764

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=87.85  E-value=0.24  Score=42.14  Aligned_cols=32  Identities=34%  Similarity=0.567  Sum_probs=28.3

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  230 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~  230 (361)
                      -|+|+|+|..|+.++..|...|+ +|+++++.+
T Consensus        18 DVlVIG~G~aGl~aA~~la~~G~-~V~lvEK~~   49 (308)
T d1y0pa2          18 DVVVVGSGGAGFSAAISATDSGA-KVILIEKEP   49 (308)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-cEEEEecCC
Confidence            48999999999999999999998 899998754

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.84  E-value=0.59  Score=40.26  Aligned_cols=30  Identities=27%  Similarity=0.199  Sum_probs=26.8

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEc
Q 018072          197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVD  227 (361)
Q Consensus       197 ~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~  227 (361)
                      ++|||+|+ |.+|...+..+...|. .|++++
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~-~V~~ld   33 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGY-LPVVID   33 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTC-CEEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcC-EEEEEE
Confidence            58999998 9999999998888898 888885

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.83  E-value=0.78  Score=35.59  Aligned_cols=82  Identities=17%  Similarity=0.199  Sum_probs=57.6

Q ss_pred             hhhcCC-CCCCEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCC
Q 018072          188 LNVAKP-ERGSSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGG  265 (361)
Q Consensus       188 ~~~~~~-~~g~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g  265 (361)
                      ++..++ -.|.+|+|+|. ..+|.-.+.++...|+ +|+.+.+....+..                     .+     ..
T Consensus        30 L~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~ga-tVt~~~~~t~~l~~---------------------~~-----~~   82 (170)
T d1a4ia1          30 IKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNA-TVTTCHSKTAHLDE---------------------EV-----NK   82 (170)
T ss_dssp             HHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTCSSHHH---------------------HH-----TT
T ss_pred             HHHhCcccccceEEEEecCCccchHHHHHHHhccC-ceEEEecccccHHH---------------------HH-----hh
Confidence            344443 47899999997 6899999999999998 88888654332221                     11     14


Q ss_pred             ccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCC
Q 018072          266 VDRSVECTGNIDNMISAFECVHDGWGVAVLVGVP  299 (361)
Q Consensus       266 ~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~  299 (361)
                      .|+++.++|.+..+.  -+.++++ -.++.+|..
T Consensus        83 aDivi~a~G~~~~i~--~~~vk~g-~iviDvgi~  113 (170)
T d1a4ia1          83 GDILVVATGQPEMVK--GEWIKPG-AIVIDCGIN  113 (170)
T ss_dssp             CSEEEECCCCTTCBC--GGGSCTT-CEEEECCCB
T ss_pred             ccchhhccccccccc--cccccCC-CeEeccCcc
Confidence            788888888866544  2467776 777788754

>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=87.75  E-value=1.2  Score=37.62  Aligned_cols=77  Identities=16%  Similarity=0.229  Sum_probs=44.6

Q ss_pred             hcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCEEEcCCCCCccHHHHHHHHcCCC
Q 018072          190 VAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDFVNTSEHDRPIQEVIAEMTNGG  265 (361)
Q Consensus       190 ~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~vv~~~~~~~~~~~~i~~~~~~g  265 (361)
                      ....++|++||=.-|++=| =++++|....-..|++.|.++.|++.+    +.+|...++....... ..   .....+.
T Consensus        97 ~L~~~~g~~vLD~CAaPGg-Kt~~la~l~~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~~~~-~~---~~~~~~~  171 (284)
T d1sqga2          97 WLAPQNGEHILDLCAAPGG-KTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRY-PS---QWCGEQQ  171 (284)
T ss_dssp             HHCCCTTCEEEEESCTTCH-HHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTC-TH---HHHTTCC
T ss_pred             ccCccccceeEeccCcccc-chhhhhhhhhhhhhhhhhcchhhhhhHhhhhhcccccceeeeccccc-cc---hhccccc
Confidence            3567899999887443322 223344444334899999999998776    4578864333222211 11   1122347


Q ss_pred             ccEEEE
Q 018072          266 VDRSVE  271 (361)
Q Consensus       266 ~Dvvid  271 (361)
                      ||.|+-
T Consensus       172 fd~IL~  177 (284)
T d1sqga2         172 FDRILL  177 (284)
T ss_dssp             EEEEEE
T ss_pred             ccEEEE
Confidence            887775

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=87.71  E-value=0.64  Score=35.02  Aligned_cols=72  Identities=19%  Similarity=0.165  Sum_probs=45.9

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHHcCCCE---EE-cCCCCCccHHHHHHHHcCCCccEEE
Q 018072          197 SSVAVFGL-GAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKFGVTD---FV-NTSEHDRPIQEVIAEMTNGGVDRSV  270 (361)
Q Consensus       197 ~~VlI~G~-g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~~G~~~---vv-~~~~~~~~~~~~i~~~~~~g~Dvvi  270 (361)
                      .+|.|+|+ |.+|...+.++...+. +.++.+|.++.+.+.+.-.-+..   .- .....  ++.+.+     .+.|+|+
T Consensus         1 sKv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~~~--~~~~~~-----~~aDivV   73 (144)
T d1mlda1           1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPE--QLPDCL-----KGCDVVV   73 (144)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGG--GHHHHH-----TTCSEEE
T ss_pred             CeEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEEcCC--ChHHHh-----CCCCEEE
Confidence            37899997 9999999998888875 78999999876544332221111   00 01111  132222     3689999


Q ss_pred             EccCC
Q 018072          271 ECTGN  275 (361)
Q Consensus       271 d~~g~  275 (361)
                      -+.|.
T Consensus        74 itag~   78 (144)
T d1mlda1          74 IPAGV   78 (144)
T ss_dssp             ECCSC
T ss_pred             ECCCc
Confidence            99884

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=87.56  E-value=0.27  Score=42.54  Aligned_cols=35  Identities=23%  Similarity=0.394  Sum_probs=27.7

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChh
Q 018072          197 SSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSK  231 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~  231 (361)
                      .+|+|+|+|+.|++++..++..|. ..|++.+++++
T Consensus         5 KrVaIIGaG~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           5 RKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             CEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             CeEEEECcCHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            579999999999988876655553 38999988753

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=87.48  E-value=0.25  Score=41.85  Aligned_cols=33  Identities=24%  Similarity=0.390  Sum_probs=27.3

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  230 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~  230 (361)
                      .|+|+|+|.+|++++..+...|..+|++++++.
T Consensus         3 dViIIGaGi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGAGIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            599999999999888777778865799998763

>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Salmonella typhimurium [TaxId: 90371]

Probab=87.07  E-value=3.7  Score=34.30  Aligned_cols=100  Identities=18%  Similarity=0.137  Sum_probs=64.5

Q ss_pred             hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEc--CChhhHHHHHHcCCCEEEcCCC----------------
Q 018072          188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD--RSSKRFEEAKKFGVTDFVNTSE----------------  249 (361)
Q Consensus       188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~--~~~~~~~~~~~~G~~~vv~~~~----------------  249 (361)
                      .+...++++.+|+..++|.-|.+++..|+.+|.+-++.+.  .++.+...++.+|++.+.....                
T Consensus        53 ~~~g~~~~~~~vv~assGn~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~~~ga~v~~~~~~~~~~~~~~~~~~~~~~  132 (302)
T d1fcja_          53 EKRGVLKPGVELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVAS  132 (302)
T ss_dssp             HHHTCCCTTCEEEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHT
T ss_pred             HHcCCCCCCceEEEeccccchhHHHHHHHHhccCCceEEeecCcHHHHHHHHHhccceEEeccccccchhhhHHHHHHhh
Confidence            3445677887777667899999999999999986555553  3456777788888876422111                


Q ss_pred             ----------CC---------ccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhc
Q 018072          250 ----------HD---------RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVH  287 (361)
Q Consensus       250 ----------~~---------~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~  287 (361)
                                .+         ..+...+.+..++.+|.++-++|+...+.-....++
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~ti~~Ei~e~~~~~~d~vv~~vG~GG~~~Gi~~~lk  189 (302)
T d1fcja_         133 DPQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIK  189 (302)
T ss_dssp             STTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHH
T ss_pred             hccceeccccccccchhHHHHhHHHHHHHHhcCCCCCEEEEcCCCccccccceeeee
Confidence                      10         012223333334468999999998666665555554

>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=87.01  E-value=0.24  Score=40.31  Aligned_cols=31  Identities=29%  Similarity=0.375  Sum_probs=27.4

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  229 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~  229 (361)
                      -|+|+|+|+.|+.|+..|..+|. +|..++..
T Consensus         5 DviVIG~GpaGl~aA~~aa~~G~-kV~viE~~   35 (235)
T d1h6va1           5 DLIIIGGGSGGLAAAKEAAKFDK-KVMVLDFV   35 (235)
T ss_dssp             EEEEECCSHHHHHHHHHHGGGCC-CEEEECCC
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-eEEEEecc
Confidence            47899999999999999999999 89889743

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=86.96  E-value=0.45  Score=39.36  Aligned_cols=33  Identities=36%  Similarity=0.486  Sum_probs=29.7

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEc
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD  227 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~  227 (361)
                      -.|.+|+|.|.|.+|..+++++...|+ +|++++
T Consensus        29 l~g~~v~IqGfGnVG~~~a~~L~~~Ga-kvv~vs   61 (242)
T d1v9la1          29 IEGKTVAIQGMGNVGRWTAYWLEKMGA-KVIAVS   61 (242)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEEE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEee
Confidence            478999999999999999999999999 777764

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=86.93  E-value=0.34  Score=40.96  Aligned_cols=37  Identities=27%  Similarity=0.323  Sum_probs=31.3

Q ss_pred             CCCEEEEEcC-C--HHHHHHHHHHHHcCCCeEEEEcCChhh
Q 018072          195 RGSSVAVFGL-G--AVGLAAAEGARIAGASRIIGVDRSSKR  232 (361)
Q Consensus       195 ~g~~VlI~G~-g--~vG~~a~~~a~~~g~~~Vi~~~~~~~~  232 (361)
                      .|.++||+|+ |  ++|.+.++.+...|+ +|+.++++++.
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga-~Vvi~~~~~~~   46 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGA-EILVGTWVPAL   46 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEEEHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCchhh
Confidence            5789999997 4  899999999999999 88888776543

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=86.83  E-value=0.39  Score=38.94  Aligned_cols=93  Identities=15%  Similarity=0.051  Sum_probs=57.0

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCE--EEcCCCCCccHHHHHHHHcCCCccEE
Q 018072          192 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTD--FVNTSEHDRPIQEVIAEMTNGGVDRS  269 (361)
Q Consensus       192 ~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~--vv~~~~~~~~~~~~i~~~~~~g~Dvv  269 (361)
                      +.-.+.+||=+|+|. |..+..+++ .|. +|+++|.+++.++.+++...+.  ++.-...+  +      ..++.||+|
T Consensus        17 ~~~~~~~VLDiGcG~-G~~~~~l~~-~g~-~v~giD~s~~~i~~a~~~~~~~~~~~~~~~~~--~------~~~~~fD~I   85 (225)
T d2p7ia1          17 PFFRPGNLLELGSFK-GDFTSRLQE-HFN-DITCVEASEEAISHAQGRLKDGITYIHSRFED--A------QLPRRYDNI   85 (225)
T ss_dssp             GGCCSSCEEEESCTT-SHHHHHHTT-TCS-CEEEEESCHHHHHHHHHHSCSCEEEEESCGGG--C------CCSSCEEEE
T ss_pred             hhCCCCcEEEEeCCC-cHHHHHHHH-cCC-eEEEEeCcHHHhhhhhcccccccccccccccc--c------ccccccccc
Confidence            334567899999876 666666654 466 8999999999999987643322  22111111  0      123479999


Q ss_pred             EEcc-----CChH-HHHHHH-HHhcCCCcEEEEE
Q 018072          270 VECT-----GNID-NMISAF-ECVHDGWGVAVLV  296 (361)
Q Consensus       270 id~~-----g~~~-~~~~~~-~~l~~~~G~iv~~  296 (361)
                      +-.-     ..+. .+.... ++|+++ |.++..
T Consensus        86 ~~~~vleh~~d~~~~l~~i~~~~Lk~g-G~l~i~  118 (225)
T d2p7ia1          86 VLTHVLEHIDDPVALLKRINDDWLAEG-GRLFLV  118 (225)
T ss_dssp             EEESCGGGCSSHHHHHHHHHHTTEEEE-EEEEEE
T ss_pred             cccceeEecCCHHHHHHHHHHHhcCCC-ceEEEE
Confidence            8531     2222 344555 568887 887764

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=86.74  E-value=0.16  Score=41.40  Aligned_cols=98  Identities=16%  Similarity=0.163  Sum_probs=58.0

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHH----HcCCCEEEcCCCCCccHHHHHHHHc---C-C
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAK----KFGVTDFVNTSEHDRPIQEVIAEMT---N-G  264 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~----~~G~~~vv~~~~~~~~~~~~i~~~~---~-~  264 (361)
                      ....+||=+|.+. |..++.+|+++.. .+|+.++.+++..+.++    +.|....+.....+  ..+.+..+.   + +
T Consensus        55 ~kpk~ILEiGt~~-G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~Gd--~~e~l~~l~~~~~~~  131 (214)
T d2cl5a1          55 YSPSLVLELGAYC-GYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILNGA--SQDLIPQLKKKYDVD  131 (214)
T ss_dssp             HCCSEEEEECCTT-SHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESC--HHHHGGGHHHHSCCC
T ss_pred             hCCCEEEEEccCc-hhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHHcCCCccceeeecc--ccccccchhhccccc
Confidence            4456899999754 5666777776532 39999999998877764    45764322222222  333333322   2 3


Q ss_pred             CccEEEEccCChHH-----HHHHHHHhcCCCcEEEE
Q 018072          265 GVDRSVECTGNIDN-----MISAFECVHDGWGVAVL  295 (361)
Q Consensus       265 g~Dvvid~~g~~~~-----~~~~~~~l~~~~G~iv~  295 (361)
                      .+|+||--......     +..+++.|+++ |.++.
T Consensus       132 ~~D~ifiD~~~~~~~~~~~l~~~~~lLkpG-GvIv~  166 (214)
T d2cl5a1         132 TLDMVFLDHWKDRYLPDTLLLEKCGLLRKG-TVLLA  166 (214)
T ss_dssp             CEEEEEECSCGGGHHHHHHHHHHTTCEEEE-EEEEE
T ss_pred             ccceeeecccccccccHHHHHHHhCccCCC-cEEEE
Confidence            68988765433221     33455668886 76543

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=86.68  E-value=0.84  Score=39.26  Aligned_cols=109  Identities=17%  Similarity=0.178  Sum_probs=68.3

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHH-HcCCCeEEEEcCChhhHHHH----HHcCCCEEEcCCCCCccHHHHHHHHcCCCccE
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGAR-IAGASRIIGVDRSSKRFEEA----KKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDR  268 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~-~~g~~~Vi~~~~~~~~~~~~----~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dv  268 (361)
                      +...++.|+|+|..+...++.+. ....++|.+.++++++.+..    +..+.....+.       .+.+     .+.|+
T Consensus       123 ~~~~~l~iiGaG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~~~-------~~a~-----~~aDi  190 (320)
T d1omoa_         123 KNSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQP-------AEEA-----SRCDV  190 (320)
T ss_dssp             TTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEECC-------HHHH-----TSSSE
T ss_pred             CCccEEEEecCcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCccccch-------hhhh-----ccccE
Confidence            44578899999999988777554 45778999999999876554    33454433321       1121     25899


Q ss_pred             EEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCCceeecChhhhccccEE
Q 018072          269 SVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTL  318 (361)
Q Consensus       269 vid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~l  318 (361)
                      |+-++.+.+.+-. .+.++++ -.+..+|... +..-.++.. .++..++
T Consensus       191 V~taT~s~~P~~~-~~~l~~G-~hv~~iGs~~-p~~~Eld~~-~~~~a~~  236 (320)
T d1omoa_         191 LVTTTPSRKPVVK-AEWVEEG-THINAIGADG-PGKQELDVE-ILKKAKI  236 (320)
T ss_dssp             EEECCCCSSCCBC-GGGCCTT-CEEEECSCCS-TTCCCBCHH-HHHTEEE
T ss_pred             EEEeccCcccccc-hhhcCCC-CeEeecCCcc-ccccccCHH-HhhcCce
Confidence            9999887443221 2467886 7788888755 323334433 3344444

>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Possible histamine N-methyltransferase TM1293
species: Thermotoga maritima [TaxId: 2336]

Probab=86.66  E-value=0.6  Score=36.97  Aligned_cols=90  Identities=21%  Similarity=0.244  Sum_probs=59.7

Q ss_pred             CCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEc
Q 018072          193 PERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVEC  272 (361)
Q Consensus       193 ~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~  272 (361)
                      +.++++||=+|+|. |..+..+     . +++++|.+++.++.+++.+...+.. ...+  +     .+.++.||+|+..
T Consensus        34 ~~~~~~vLDiGcG~-G~~~~~~-----~-~~~giD~s~~~~~~a~~~~~~~~~~-d~~~--l-----~~~~~~fD~I~~~   98 (208)
T d1vlma_          34 LLPEGRGVEIGVGT-GRFAVPL-----K-IKIGVEPSERMAEIARKRGVFVLKG-TAEN--L-----PLKDESFDFALMV   98 (208)
T ss_dssp             HCCSSCEEEETCTT-STTHHHH-----T-CCEEEESCHHHHHHHHHTTCEEEEC-BTTB--C-----CSCTTCEEEEEEE
T ss_pred             hCCCCeEEEECCCC-ccccccc-----c-eEEEEeCChhhcccccccccccccc-cccc--c-----ccccccccccccc
Confidence            45677899999864 5544444     2 5789999999999999876643332 2211  1     0122379999874


Q ss_pred             c-----CCh-HHHHHHHHHhcCCCcEEEEEcC
Q 018072          273 T-----GNI-DNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       273 ~-----g~~-~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      -     ..+ ..+..+.+.|+++ |++++...
T Consensus        99 ~~l~h~~d~~~~l~~~~~~L~pg-G~l~i~~~  129 (208)
T d1vlma_          99 TTICFVDDPERALKEAYRILKKG-GYLIVGIV  129 (208)
T ss_dssp             SCGGGSSCHHHHHHHHHHHEEEE-EEEEEEEE
T ss_pred             cccccccccccchhhhhhcCCCC-ceEEEEec
Confidence            2     222 3578889999997 99887653

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=86.54  E-value=0.32  Score=40.59  Aligned_cols=32  Identities=31%  Similarity=0.424  Sum_probs=27.8

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  230 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~  230 (361)
                      -|+|+|+|.+|+.++..+...|. +|+++++.+
T Consensus         5 DvvIIGaGi~Gls~A~~La~~G~-~V~viE~~~   36 (281)
T d2gf3a1           5 DVIVVGAGSMGMAAGYQLAKQGV-KTLLVDAFD   36 (281)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-CEEEECSSC
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence            38899999999999988888998 899998753

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=86.15  E-value=0.79  Score=37.79  Aligned_cols=102  Identities=21%  Similarity=0.109  Sum_probs=62.7

Q ss_pred             hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCEEEcCCCCCccHHHHHHHHcC
Q 018072          188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDFVNTSEHDRPIQEVIAEMTN  263 (361)
Q Consensus       188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~vv~~~~~~~~~~~~i~~~~~  263 (361)
                      .....+....+||=+|+|. |..+..++++..--+++++|.. +.++.+    .+.|....+.....+  +.    +...
T Consensus        73 ~~~~d~~~~~~VLDvGcG~-G~~~~~la~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~rv~~~~~D--~~----~~~~  144 (253)
T d1tw3a2          73 AAAYDWTNVRHVLDVGGGK-GGFAAAIARRAPHVSATVLEMA-GTVDTARSYLKDEGLSDRVDVVEGD--FF----EPLP  144 (253)
T ss_dssp             HHHSCCTTCSEEEEETCTT-SHHHHHHHHHCTTCEEEEEECT-THHHHHHHHHHHTTCTTTEEEEECC--TT----SCCS
T ss_pred             HhhcCCccCCEEEEeCCCC-CHHHHHHHHhcceeEEEEccCH-HHHHHHHHHHHHhhcccchhhcccc--ch----hhcc
Confidence            4555677888999999875 7888889988754488899874 434443    334432211111111  10    0112


Q ss_pred             CCccEEEEcc-----CCh---HHHHHHHHHhcCCCcEEEEEcC
Q 018072          264 GGVDRSVECT-----GNI---DNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       264 ~g~Dvvid~~-----g~~---~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      .++|+|+-..     ..+   ..+..+.+.|+++ |++++.-.
T Consensus       145 ~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkPG-G~l~i~e~  186 (253)
T d1tw3a2         145 RKADAIILSFVLLNWPDHDAVRILTRCAEALEPG-GRILIHER  186 (253)
T ss_dssp             SCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEE-EEEEEEEC
T ss_pred             cchhheeeccccccCCchhhHHHHHHHHHhcCCC-cEEEEEec
Confidence            3689988532     122   3467888999997 99988754

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=86.12  E-value=0.31  Score=41.81  Aligned_cols=33  Identities=39%  Similarity=0.605  Sum_probs=28.4

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 018072          197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  230 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~  230 (361)
                      -.|+|+|+|..|+.|+..|...|+ +|+++++.+
T Consensus        20 ~DVvVIGaG~aGl~AA~~aa~~G~-~V~vlEK~~   52 (317)
T d1qo8a2          20 TQVLVVGAGSAGFNASLAAKKAGA-NVILVDKAP   52 (317)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHTC-CEEEECSSS
T ss_pred             cCEEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence            358999999999999999999998 899997653

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=86.07  E-value=0.34  Score=40.50  Aligned_cols=60  Identities=27%  Similarity=0.358  Sum_probs=36.4

Q ss_pred             EEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCC-CccEEEEccC
Q 018072          198 SVAVFGL-GAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG  274 (361)
Q Consensus       198 ~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g  274 (361)
                      +|||+|+ |.+|...+..+...|  .++++++....      +    ..|..+    . +.+.+...+ ++|+||++++
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g--~~v~~~~~~~~------~----~~Dl~~----~-~~~~~~i~~~~~D~Vih~Aa   63 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVG--NLIALDVHSKE------F----CGDFSN----P-KGVAETVRKLRPDVIVNAAA   63 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTS--EEEEECTTCSS------S----CCCTTC----H-HHHHHHHHHHCCSEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHhCC--CEEEEECCCcc------c----cCcCCC----H-HHHHHHHHHcCCCEEEEecc
Confidence            6999998 999999888776655  46666554321      1    011211    1 123332223 6899999886

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=85.93  E-value=0.82  Score=35.26  Aligned_cols=82  Identities=16%  Similarity=0.131  Sum_probs=51.4

Q ss_pred             EEEEEcCCHHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccCCh
Q 018072          198 SVAVFGLGAVGLAAAEGARIA-GASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTGNI  276 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~-g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g~~  276 (361)
                      +|.|+|.|.+|...+..++.. +.+-|-++++++++.+      ...+..+.+..         .....+|+|+.+++..
T Consensus         5 rvgiiG~G~ig~~~~~~l~~~~~~elvav~~~~~~~~~------~~~~~~~~~~~---------~~~~~~D~Vvi~tp~~   69 (170)
T d1f06a1           5 RVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATLDT------KTPVFDVADVD---------KHADDVDVLFLCMGSA   69 (170)
T ss_dssp             EEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCCSS------SSCEEEGGGGG---------GTTTTCSEEEECSCTT
T ss_pred             eEEEECChHHHHHHHHHHHhCCCcEEEEEEeccccccc------ccccccchhhh---------hhccccceEEEeCCCc
Confidence            689999999999887777665 4533444555544321      11222221111         1113689999999987


Q ss_pred             HHHHHHHHHhcCCCcEEEE
Q 018072          277 DNMISAFECVHDGWGVAVL  295 (361)
Q Consensus       277 ~~~~~~~~~l~~~~G~iv~  295 (361)
                      ...+.+.++|..+ -.++.
T Consensus        70 ~h~~~a~~aL~aG-~~vv~   87 (170)
T d1f06a1          70 TDIPEQAPKFAQF-ACTVD   87 (170)
T ss_dssp             THHHHHHHHHTTT-SEEEC
T ss_pred             ccHHHHHHHHHCC-CcEEE
Confidence            7788999999974 45443

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=85.54  E-value=2.3  Score=34.61  Aligned_cols=33  Identities=33%  Similarity=0.473  Sum_probs=27.5

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHH-HHcCCCeEEEEc
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGA-RIAGASRIIGVD  227 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a-~~~g~~~Vi~~~  227 (361)
                      -.|.+|+|.|.|.||..+++.+ +..|+ +|++++
T Consensus        29 l~g~~vaIqG~GnVG~~~a~~L~~e~Ga-~vv~vs   62 (234)
T d1b26a1          29 PKKATVAVQGFGNVGQFAALLISQELGS-KVVAVS   62 (234)
T ss_dssp             TTTCEEEEECCSHHHHHHHHHHHHHHCC-EEEEEE
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHhcCC-ceEEee
Confidence            4688999999999999999887 56798 777664

>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Aclacinomycin-10-hydroxylase RdmB
species: Streptomyces purpurascens [TaxId: 1924]

Probab=85.33  E-value=0.28  Score=40.93  Aligned_cols=102  Identities=19%  Similarity=0.062  Sum_probs=62.3

Q ss_pred             hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HHcCCCEEEcCCCCCccHHHHHHHHcC
Q 018072          188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEA----KKFGVTDFVNTSEHDRPIQEVIAEMTN  263 (361)
Q Consensus       188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~----~~~G~~~vv~~~~~~~~~~~~i~~~~~  263 (361)
                      .+...+....+||=+|+|. |..+..++++..--+++++|. ++..+.+    .+.|....+.....+  +.    ...+
T Consensus        74 ~~~~d~~~~~~vlDvG~G~-G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~~~~~~~~ri~~~~~d--~~----~~~p  145 (256)
T d1qzza2          74 ADAYDWSAVRHVLDVGGGN-GGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGD--FF----KPLP  145 (256)
T ss_dssp             HHTSCCTTCCEEEEETCTT-SHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECC--TT----SCCS
T ss_pred             HhcCCCccCCEEEEECCCC-CHHHHHHHHhhcCcEEEEecC-hHHHHHHHHHHhhcCCcceeeeeeee--cc----cccc
Confidence            3445677778999998876 788899998874338999987 4444443    334443211111111  10    0112


Q ss_pred             CCccEEEEcc-----CCh---HHHHHHHHHhcCCCcEEEEEcC
Q 018072          264 GGVDRSVECT-----GNI---DNMISAFECVHDGWGVAVLVGV  298 (361)
Q Consensus       264 ~g~Dvvid~~-----g~~---~~~~~~~~~l~~~~G~iv~~g~  298 (361)
                      .++|+|+-.-     ..+   ..+..+.+.|+++ |+++++..
T Consensus       146 ~~~D~v~~~~vLh~~~d~~~~~lL~~i~~~Lkpg-G~llI~d~  187 (256)
T d1qzza2         146 VTADVVLLSFVLLNWSDEDALTILRGCVRALEPG-GRLLVLDR  187 (256)
T ss_dssp             CCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE-EEEEEEEC
T ss_pred             ccchhhhccccccccCcHHHHHHHHHHHhhcCCc-ceeEEEEe
Confidence            3689887531     111   3467888999997 99998864

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=85.32  E-value=3.5  Score=34.98  Aligned_cols=107  Identities=21%  Similarity=0.124  Sum_probs=66.4

Q ss_pred             hhcCCCCCCEEEEE-cCCHHHHHHHHHHHHcCCCeEEEE--cCChhhHHHHHHcCCCEEEcCCC----------------
Q 018072          189 NVAKPERGSSVAVF-GLGAVGLAAAEGARIAGASRIIGV--DRSSKRFEEAKKFGVTDFVNTSE----------------  249 (361)
Q Consensus       189 ~~~~~~~g~~VlI~-G~g~vG~~a~~~a~~~g~~~Vi~~--~~~~~~~~~~~~~G~~~vv~~~~----------------  249 (361)
                      +...++++.+.+|. .+|..|.+.+..|+.+|.+-++++  ..++.|++.++.+|++.++....                
T Consensus        57 ~~g~~~~~~~~vv~aSsGN~g~a~A~~a~~~g~~~~iv~p~~~~~~k~~~i~~~Ga~vi~~~~~~~~~~~~~~~~~~~~~  136 (320)
T d1z7wa1          57 KKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAK  136 (320)
T ss_dssp             HTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHH
T ss_pred             HcCCCCCCCceEEeeCCchHHHHHHHHHHhhccceEEeehhhhhhhhhhhhhccCcceEEeeccccccccchhHHHHHHh
Confidence            44556676665555 569999999999999998544444  34467888899999975533211                


Q ss_pred             -----------CCc-------cHHHHHHHHcCCCccEEEEccCChHHHH---HHHHHhcCCCcEEEEE
Q 018072          250 -----------HDR-------PIQEVIAEMTNGGVDRSVECTGNIDNMI---SAFECVHDGWGVAVLV  296 (361)
Q Consensus       250 -----------~~~-------~~~~~i~~~~~~g~Dvvid~~g~~~~~~---~~~~~l~~~~G~iv~~  296 (361)
                                 ...       +....+.+...+.+|.++-++|+..++.   ..++...+. -+++-+
T Consensus       137 ~~~~~~~~~~~~~~n~~~g~~t~~~EI~~q~~~~~D~vv~~vGgGg~~~Gi~~~~k~~~~~-~~~igv  203 (320)
T d1z7wa1         137 TPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNAN-VKLYGV  203 (320)
T ss_dssp             CTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTT-CEEEEE
T ss_pred             CCCceecccccccchHHHhhhhHHHHHHHhccCCCCEEEeCCCCCcccchhhhhhhhhhcc-eeeecc
Confidence                       000       0112222233346899999998866554   344445555 566555

>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=85.24  E-value=0.38  Score=42.65  Aligned_cols=32  Identities=28%  Similarity=0.484  Sum_probs=25.6

Q ss_pred             EEEEEcCCHHHHHHHHHHHH------cCCCeEEEEcCCh
Q 018072          198 SVAVFGLGAVGLAAAEGARI------AGASRIIGVDRSS  230 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~------~g~~~Vi~~~~~~  230 (361)
                      -|+|+|+|+.|+.|+..+..      .|. +|+++++.+
T Consensus        34 DViIVGgGPAGlsaA~~LA~l~~~~~~Gl-~VlllEK~~   71 (380)
T d2gmha1          34 DVVIVGAGPAGLSAATRLKQLAAQHEKDL-RVCLVEKAA   71 (380)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHHHHTTCCC-CEEEECSSS
T ss_pred             CEEEECCCHHHHHHHHHHHhhhhhhcCCC-EEEEEcCCC
Confidence            58999999999887765543      688 899998764

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=85.20  E-value=1.2  Score=34.80  Aligned_cols=95  Identities=13%  Similarity=0.162  Sum_probs=56.6

Q ss_pred             CCCCCEEEEE--cCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHc-CC-
Q 018072          193 PERGSSVAVF--GLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMT-NG-  264 (361)
Q Consensus       193 ~~~g~~VlI~--G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~-~~-  264 (361)
                      ...|.+||=+  |.|.+|+.|    ...|+..|+.++.+++..+.+++    ++...-+.....+  ..+.+..+. .+ 
T Consensus        39 ~~~~~~vLDlfaGsG~~g~ea----~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D--~~~~l~~~~~~~~  112 (182)
T d2fhpa1          39 YFDGGMALDLYSGSGGLAIEA----VSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMD--ANRALEQFYEEKL  112 (182)
T ss_dssp             CCSSCEEEETTCTTCHHHHHH----HHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESC--HHHHHHHHHHTTC
T ss_pred             hcCCCEEEEccccccccccee----eecchhHHHHHHHHHHHHHHHHHHhhhhhccccccccccc--chhhhhhhcccCC
Confidence            3567887776  447777643    34788899999999998888754    4553211111222  555565543 23 


Q ss_pred             CccEEEEccCC-----hHHHHHHHH--HhcCCCcEEE
Q 018072          265 GVDRSVECTGN-----IDNMISAFE--CVHDGWGVAV  294 (361)
Q Consensus       265 g~Dvvid~~g~-----~~~~~~~~~--~l~~~~G~iv  294 (361)
                      .||+||-...-     ...++...+  .|+++ |.++
T Consensus       113 ~fDlIflDPPY~~~~~~~~l~~i~~~~~L~~~-giIi  148 (182)
T d2fhpa1         113 QFDLVLLDPPYAKQEIVSQLEKMLERQLLTNE-AVIV  148 (182)
T ss_dssp             CEEEEEECCCGGGCCHHHHHHHHHHTTCEEEE-EEEE
T ss_pred             CcceEEechhhhhhHHHHHHHHHHHCCCCCCC-EEEE
Confidence            79999976531     123344333  36775 6654

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=85.20  E-value=1.8  Score=34.12  Aligned_cols=109  Identities=20%  Similarity=0.222  Sum_probs=66.4

Q ss_pred             hhhcCCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCE-EEcCCCCCccHHHHHHHHc
Q 018072          188 LNVAKPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTD-FVNTSEHDRPIQEVIAEMT  262 (361)
Q Consensus       188 ~~~~~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~-vv~~~~~~~~~~~~i~~~~  262 (361)
                      .+...+++|+.++=.++|. |-.+..++....-.+|+++|++++.++.+++    ++... .+...-.  ++...+..+.
T Consensus        16 i~~l~~~~~~~~lD~t~G~-Gghs~~il~~~~~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~--~~~~~~~~~~   92 (192)
T d1m6ya2          16 IEFLKPEDEKIILDCTVGE-GGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYR--EADFLLKTLG   92 (192)
T ss_dssp             HHHHCCCTTCEEEETTCTT-SHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGG--GHHHHHHHTT
T ss_pred             HHhhCCCCCCEEEEecCCC-cHHHHHHHhcCCCCeEEEeechHHHHHHHHHhhccccccccchhHHHh--hHHHHHHHcC
Confidence            3445678888664434454 3334455555433499999999999998876    34322 2222222  2555555554


Q ss_pred             CCCccEEEEccCC---------------hHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072          263 NGGVDRSVECTGN---------------IDNMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       263 ~~g~Dvvid~~g~---------------~~~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      .+.+|.|+=-.|-               ...+..+.+.|+++ |+++.+....
T Consensus        93 ~~~vdgIl~DlGvSs~Qld~~~r~~~~~~~~L~~a~~~Lk~g-G~l~ii~f~s  144 (192)
T d1m6ya2          93 IEKVDGILMDLGVSTYQLKGENRELENLKEFLKKAEDLLNPG-GRIVVISFHS  144 (192)
T ss_dssp             CSCEEEEEEECSCCHHHHHTSHTHHHHHHHHHHHGGGGEEEE-EEEEEEESSH
T ss_pred             CCCcceeeeccchhHhhhhhhhccchhHHHHHHHHHHhcCCC-Ceeeeecccc
Confidence            4588887644443               12466777888997 9998886544

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=85.20  E-value=0.72  Score=33.14  Aligned_cols=37  Identities=16%  Similarity=0.056  Sum_probs=28.5

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCC--eEEEEcCCh
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGAS--RIIGVDRSS  230 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~--~Vi~~~~~~  230 (361)
                      +.+++++|+|+|.+|.-.+..+..++.+  .|+.+++.+
T Consensus        18 ~~p~~v~ivGgG~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          18 EPPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             SCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             hcCCeEEEECCcHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            4457999999999999988777776642  688886654

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=85.15  E-value=0.33  Score=40.77  Aligned_cols=33  Identities=27%  Similarity=0.454  Sum_probs=27.0

Q ss_pred             CEEEEEcCCHHHHHHHHH-HHHcCCCeEEEEcCCh
Q 018072          197 SSVAVFGLGAVGLAAAEG-ARIAGASRIIGVDRSS  230 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~-a~~~g~~~Vi~~~~~~  230 (361)
                      -.|+|+|+|+.|+.++.. |+..|. +|+++++.+
T Consensus        34 ~DViVIGaGpaGL~aA~~LA~~~G~-~V~vlE~~~   67 (278)
T d1rp0a1          34 TDVVVVGAGSAGLSAAYEISKNPNV-QVAIIEQSV   67 (278)
T ss_dssp             EEEEEECCSHHHHHHHHHHHTSTTS-CEEEEESSS
T ss_pred             CCEEEECCCHHHHHHHHHHHHccCC-eEEEEecCC
Confidence            449999999999987765 555799 999998775

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=85.08  E-value=0.92  Score=37.71  Aligned_cols=72  Identities=17%  Similarity=0.249  Sum_probs=41.2

Q ss_pred             EEEEcC-CHHHHHHHHHHHHcCCCeEEEEcC--ChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCC-CccEEEEccC
Q 018072          199 VAVFGL-GAVGLAAAEGARIAGASRIIGVDR--SSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNG-GVDRSVECTG  274 (361)
Q Consensus       199 VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~--~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~-g~Dvvid~~g  274 (361)
                      |||+|+ |.+|...+..+...|...|++++.  +..+.....++......+..+    ....+.....- ..++++...+
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~aa   77 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKED----FLIQIMAGEEFGDVEAIFHEGA   77 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTSCCSEEEEHHH----HHHHHHTTCCCSSCCEEEECCS
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccccchhhhccchH----HHHHHhhhhcccchhhhhhhcc
Confidence            789987 999999888888778657888862  223333344444333332111    22222222222 6788887654

>d1p3ha_ b.35.1.1 (A:) Chaperonin-10 (GroES) {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: GroES
domain: Chaperonin-10 (GroES)
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=85.06  E-value=0.68  Score=32.43  Aligned_cols=24  Identities=38%  Similarity=0.522  Sum_probs=19.2

Q ss_pred             eeEEEEEeCCCCC----------CCCCCCEEeec
Q 018072           72 AAGVVESVGEGVS----------DLEVGDHVLPV   95 (361)
Q Consensus        72 ~~G~V~~~G~~v~----------~~~~Gd~V~~~   95 (361)
                      ..|+|+++|++..          .+++||+|+..
T Consensus        38 ~~G~VvavG~g~~~~~~~~~~~~~vk~GD~Vl~~   71 (99)
T d1p3ha_          38 QEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYS   71 (99)
T ss_dssp             EEEEEEEECCCEECSSSSCEECCSCCTTCEEEEE
T ss_pred             eEEEEEEECCceEcCCCCEecCCeeecCCEEEEc
Confidence            3699999998742          37899999865

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=85.04  E-value=0.74  Score=34.71  Aligned_cols=39  Identities=31%  Similarity=0.317  Sum_probs=32.2

Q ss_pred             CCEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChhhHH
Q 018072          196 GSSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRFE  234 (361)
Q Consensus       196 g~~VlI~G~g~vG~~a~~~a~~~g-~~~Vi~~~~~~~~~~  234 (361)
                      ..+|.|+|+|.+|...+..+...| ...++.+|.++++.+
T Consensus         5 ~~KI~IIGaG~VG~~~A~~l~~~~~~~elvL~D~~~~~~~   44 (146)
T d1ez4a1           5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTK   44 (146)
T ss_dssp             BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHH
T ss_pred             CCEEEEECCCHHHHHHHHHHHhcCCCcEEEEeecccchhH
Confidence            458999999999999888777777 368999999987643

>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Fumarate reductase
species: Wolinella succinogenes [TaxId: 844]

Probab=84.97  E-value=0.34  Score=41.59  Aligned_cols=31  Identities=29%  Similarity=0.293  Sum_probs=27.7

Q ss_pred             EEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 018072          199 VAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  230 (361)
Q Consensus       199 VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~  230 (361)
                      |+|+|+|+.|+.|+..|...|+ +|++++..+
T Consensus         8 VvVIG~G~AGl~AAl~aa~~G~-~V~liEK~~   38 (336)
T d2bs2a2           8 SLVIGGGLAGLRAAVATQQKGL-STIVLSLIP   38 (336)
T ss_dssp             EEEECCSHHHHHHHHHHHTTTC-CEEEECSSC
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-CEEEEecCC
Confidence            8899999999999999999999 799997654

>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=84.97  E-value=0.43  Score=39.53  Aligned_cols=30  Identities=37%  Similarity=0.457  Sum_probs=27.4

Q ss_pred             EEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 018072          199 VAVFGLGAVGLAAAEGARIAGASRIIGVDRS  229 (361)
Q Consensus       199 VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~  229 (361)
                      ++|+|+|+.|+.++..|..+|. +|..+++.
T Consensus         4 viVIG~G~aG~~aA~~aa~~G~-~V~liE~~   33 (259)
T d1onfa1           4 LIVIGGGSGGMAAARRAARHNA-KVALVEKS   33 (259)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-eEEEEecC
Confidence            7888999999999999999999 89999865

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=84.90  E-value=1.3  Score=34.14  Aligned_cols=74  Identities=14%  Similarity=0.222  Sum_probs=44.1

Q ss_pred             CCCEEEEEcCCHHHHHHH---HHHHHcC--CCeEEEEcCChhhHHHH--------HHcCCCEEEcCCCCCccHHHHHHHH
Q 018072          195 RGSSVAVFGLGAVGLAAA---EGARIAG--ASRIIGVDRSSKRFEEA--------KKFGVTDFVNTSEHDRPIQEVIAEM  261 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~---~~a~~~g--~~~Vi~~~~~~~~~~~~--------~~~G~~~vv~~~~~~~~~~~~i~~~  261 (361)
                      |.-+|.|+|+|.+|....   .+++...  ...++.+|.++++++..        ..++...-+.... +  ..+.+   
T Consensus         1 p~mKI~iIGaGsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~t-d--~~eaL---   74 (171)
T d1obba1           1 PSVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTM-N--LDDVI---   74 (171)
T ss_dssp             CCCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEES-C--HHHHH---
T ss_pred             CCcEEEEECCCHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEeC-C--hhhcc---
Confidence            466899999998885422   2333222  24899999999987642        2244433222111 1  22222   


Q ss_pred             cCCCccEEEEccCCh
Q 018072          262 TNGGVDRSVECTGNI  276 (361)
Q Consensus       262 ~~~g~Dvvid~~g~~  276 (361)
                        .+.|+|+.+.+..
T Consensus        75 --~dad~Vv~~~~~g   87 (171)
T d1obba1          75 --IDADFVINTAMVG   87 (171)
T ss_dssp             --TTCSEEEECCCTT
T ss_pred             --cCCCeEeeecccc
Confidence              3689999998763

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=84.79  E-value=2.2  Score=33.68  Aligned_cols=72  Identities=21%  Similarity=0.195  Sum_probs=44.4

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEEEcCCCCCccHHHHHHHHcCCCcc
Q 018072          192 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDFVNTSEHDRPIQEVIAEMTNGGVD  267 (361)
Q Consensus       192 ~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~vv~~~~~~~~~~~~i~~~~~~g~D  267 (361)
                      +--.|++||=+|+|. |.+++.++ ..|+.+|+++|.+++..+.+++    ++...-+...+..         ..++.||
T Consensus        43 ~dl~g~~vLDlg~Gt-G~l~i~a~-~~g~~~v~~vdi~~~~~~~a~~N~~~~~~~~~~~~~d~~---------~~~~~fD  111 (201)
T d1wy7a1          43 GDIEGKVVADLGAGT-GVLSYGAL-LLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVS---------EFNSRVD  111 (201)
T ss_dssp             TSSTTCEEEEETCTT-CHHHHHHH-HTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGG---------GCCCCCS
T ss_pred             CCCCCCEEEECcCcc-hHHHHHHH-HcCCCEEEEEcCcHHHHHHHHHHHHHcCCCceEEECchh---------hhCCcCc
Confidence            334578998888753 34444433 4677799999999998888865    3443222111110         1234899


Q ss_pred             EEEEccC
Q 018072          268 RSVECTG  274 (361)
Q Consensus       268 vvid~~g  274 (361)
                      +||-...
T Consensus       112 ~Vi~nPP  118 (201)
T d1wy7a1         112 IVIMNPP  118 (201)
T ss_dssp             EEEECCC
T ss_pred             EEEEcCc
Confidence            9987553

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=84.69  E-value=0.74  Score=33.00  Aligned_cols=35  Identities=14%  Similarity=0.058  Sum_probs=27.1

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHc---CCCeEEEEcCCh
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIA---GASRIIGVDRSS  230 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~---g~~~Vi~~~~~~  230 (361)
                      .+++++|+|+|.+|.-.++++..+   |. .|..+.+.+
T Consensus        17 ~p~~v~IiGgG~ig~E~A~~l~~~~~~g~-~Vtli~~~~   54 (117)
T d1feca2          17 APKRALCVGGGYISIEFAGIFNAYKARGG-QVDLAYRGD   54 (117)
T ss_dssp             CCSEEEEECSSHHHHHHHHHHHHHSCTTC-EEEEEESSS
T ss_pred             cCCeEEEECCChHHHHHHHHhHhhccccc-ccceecccc
Confidence            357999999999999888776554   55 788886654

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=84.60  E-value=0.37  Score=41.26  Aligned_cols=32  Identities=44%  Similarity=0.667  Sum_probs=28.0

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  230 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~  230 (361)
                      -|+|+|+|+.|+.++..|...|+ +|+++++.+
T Consensus        25 DVvVIG~G~aGl~aA~~la~~G~-~V~llEk~~   56 (322)
T d1d4ca2          25 DVVIIGSGGAGLAAAVSARDAGA-KVILLEKEP   56 (322)
T ss_dssp             SEEEECSSHHHHHHHHHHHTTTC-CEEEECSSS
T ss_pred             eEEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence            48999999999999998888898 899998754

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=84.58  E-value=1  Score=34.97  Aligned_cols=102  Identities=23%  Similarity=0.318  Sum_probs=58.0

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCC---eEEEEc--CChhhHHHHHHcCC-------CE-------EEcCCCCCccHHHHH
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGAS---RIIGVD--RSSKRFEEAKKFGV-------TD-------FVNTSEHDRPIQEVI  258 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~---~Vi~~~--~~~~~~~~~~~~G~-------~~-------vv~~~~~~~~~~~~i  258 (361)
                      +|.|.|-|-+|.+....+...+..   .|+++-  .+.+.+.++-++--       ..       +++-..-.-.-....
T Consensus         3 kigINGfGRIGR~v~R~~~~~~~~~~~~vvaINd~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~p   82 (173)
T d1obfo1           3 RVAINGYGRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVDANRNP   82 (173)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSCG
T ss_pred             EEEEECCcHHHHHHHHHHHhCCCCCCeEEEEEcCCCChHHHHHhhcccccCCCcCceEEeccceEEECCEEEEEEecCCH
Confidence            578999999999999877643321   455553  34455555544211       11       111000000000011


Q ss_pred             HHHcC-C-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072          259 AEMTN-G-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       259 ~~~~~-~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      .++.. + ++|+|+||+|.-...+.+...|..+ -+-|++..+.
T Consensus        83 ~~i~W~~~gvDiViEcTG~f~~~~~a~~hl~~G-akkViiSAP~  125 (173)
T d1obfo1          83 AQLPWGALKVDVVLECTGFFTTKEKAGAHIKGG-AKKVIISAPG  125 (173)
T ss_dssp             GGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHT-CSEEEESSCC
T ss_pred             HHCcccccccceEEEecccccCHHHHHHHhccC-CcceEEecCC
Confidence            11221 2 8999999999867778888888876 6667776554

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=84.42  E-value=0.74  Score=36.53  Aligned_cols=68  Identities=16%  Similarity=0.312  Sum_probs=41.9

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072          197 SSVAVFGL-GAVGLAAAEGARIAGA-SRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       197 ~~VlI~G~-g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      .+|||+|+ |.+|...+..+...|. .+|++..+++..       ....+ .....+  +.+.... .....|.|++++|
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~-------~~~~~-~~~~~d--~~~~~~~-~~~~~d~vi~~~g   71 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-------EHPRL-DNPVGP--LAELLPQ-LDGSIDTAFCCLG   71 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-------CCTTE-ECCBSC--HHHHGGG-CCSCCSEEEECCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh-------hcccc-cccccc--hhhhhhc-cccchheeeeeee
Confidence            68999998 9999999998888885 256666554321       00111 111122  4333222 2336899999987


Q ss_pred             C
Q 018072          275 N  275 (361)
Q Consensus       275 ~  275 (361)
                      .
T Consensus        72 ~   72 (212)
T d2a35a1          72 T   72 (212)
T ss_dssp             C
T ss_pred             e
Confidence            5

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=84.41  E-value=0.56  Score=36.28  Aligned_cols=97  Identities=27%  Similarity=0.340  Sum_probs=58.4

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcC--ChhhHHHHHHc----CC---CE-------EEcC------CCC---Cc
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDR--SSKRFEEAKKF----GV---TD-------FVNT------SEH---DR  252 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~--~~~~~~~~~~~----G~---~~-------vv~~------~~~---~~  252 (361)
                      +|.|.|-|-+|.++...+....--.|+++--  +.+.+.++-++    |.   +.       +++-      ...   +-
T Consensus         3 kigINGFGRIGR~v~R~~~~~~~i~ivaINd~~~~~~~ayLl~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~p~~i   82 (166)
T d1gado1           3 KVGINGFGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPANL   82 (166)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGGGG
T ss_pred             EEEEECCcHHHHHHHHHHhhCCCeEEEEEeCCCCHHHHhhhheecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCChHHC
Confidence            5788999999999999877664225666632  23344444332    11   11       1110      001   11


Q ss_pred             cHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCC
Q 018072          253 PIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD  302 (361)
Q Consensus       253 ~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~  302 (361)
                      +|.+       -++|+|+||+|.-...+.+...|..+ -+-|+++.+..+
T Consensus        83 ~W~~-------~gvDiViEcTG~f~t~~~~~~hl~~g-akkViiSaP~~d  124 (166)
T d1gado1          83 KWDE-------VGVDVVAEATGLFLTDETARKHITAG-AKKVVMTGPSKD  124 (166)
T ss_dssp             CHHH-------HTCSEEEECSSSCCSHHHHTHHHHTT-CSEEEESSCCSS
T ss_pred             Cccc-------cCCCEEEEccccccCHHHHHHHhcCC-CceEEeeccccc
Confidence            1211       17999999999877788888889875 666667655433

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=84.39  E-value=7.1  Score=29.78  Aligned_cols=97  Identities=23%  Similarity=0.320  Sum_probs=59.0

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHc-C--CCeEEEEc--CChhhHHHHHHc----CC---CE-------EEc------CCCC-
Q 018072          197 SSVAVFGLGAVGLAAAEGARIA-G--ASRIIGVD--RSSKRFEEAKKF----GV---TD-------FVN------TSEH-  250 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~-g--~~~Vi~~~--~~~~~~~~~~~~----G~---~~-------vv~------~~~~-  250 (361)
                      .+|.|.|-|-+|.++...+... +  . .|+++-  .+.+.+.++-++    |.   +.       +++      +... 
T Consensus         1 ~kIgINGfGRIGR~v~R~~~~~~~~~i-~vvaINd~~~~e~~ayLlkyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~~   79 (169)
T d1hdgo1           1 ARVAINGFGRIGRLVYRIIYERKNPDI-EVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPD   79 (169)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHTCTTC-EEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSS
T ss_pred             CEEEEECCChHHHHHHHHHHhccCCCE-EEEEeccCccHHHHHHHHhccccccccCceEEEECCEEEECCEEEEEEeCCC
Confidence            3688999999999999877653 2  4 666662  234555555442    11   11       111      0001 


Q ss_pred             --CccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCC
Q 018072          251 --DRPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD  302 (361)
Q Consensus       251 --~~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~  302 (361)
                        +-+|.+       -++|+|+||+|.-...+.+...+..+ -+-|+++.+...
T Consensus        80 p~~i~W~~-------~gvD~ViEcTG~f~t~~~~~~hl~~G-akkViiSAP~kd  125 (169)
T d1hdgo1          80 PSKLPWKD-------LGVDFVIESTGVFRNREKAELHLQAG-AKKVIITAPAKG  125 (169)
T ss_dssp             GGGSCHHH-------HTCCEEEECSSSCCBHHHHTHHHHTT-CSEEEESSCCBS
T ss_pred             hhhCCccc-------cCCCEEEEecceeccccchhhhccCC-CceEEEecccCC
Confidence              111211       17999999999877788888888875 655666655433

>d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Human(Homo sapiens), liver isoform [TaxId: 9606]

Probab=84.26  E-value=0.88  Score=35.22  Aligned_cols=102  Identities=23%  Similarity=0.284  Sum_probs=59.3

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEE-cC--ChhhHHHHHHc----CC---CE-------EEcCCCCCccHHHHHHH
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGV-DR--SSKRFEEAKKF----GV---TD-------FVNTSEHDRPIQEVIAE  260 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~-~~--~~~~~~~~~~~----G~---~~-------vv~~~~~~~~~~~~i~~  260 (361)
                      +|.|.|-|-+|.++...+...+--.++++ +.  +.+.+.++-++    |.   +.       .++-..-.-.-.....+
T Consensus         3 kIgINGFGRIGR~v~R~~~~~~~~~ivaINd~~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~~~~~~~p~~   82 (169)
T d1u8fo1           3 KVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDPSK   82 (169)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred             EEEEECCcHHHHHHHHHHHHCCCcEEEEecCCCccHHHHHHHHhhccccCCcCCeEEEECCEEEECCEEEEEEECCChhh
Confidence            68899999999999987766642266666 42  44566666543    11   11       11100000000000112


Q ss_pred             HcC-C-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072          261 MTN-G-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       261 ~~~-~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      +.. + ++|+|+||+|.-...+.+...+..+ -+-+++..+.
T Consensus        83 i~W~~~~vDiViEcTG~f~~~~~~~~hl~~g-akkViiSaP~  123 (169)
T d1u8fo1          83 IKWGDAGAEYVVESTGVFTTMEKAGAHLQGG-AKRVIISAPS  123 (169)
T ss_dssp             CCTTTTTCCEEEECSSSCCSHHHHGGGGGGT-CSEEEESSCC
T ss_pred             CCccccCCCEEEEecceeccHHHHHHHHhcC-CceEeecccc
Confidence            221 2 8999999999877777777788875 6666666544

>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Escherichia coli [TaxId: 562]

Probab=84.20  E-value=3.3  Score=35.23  Aligned_cols=102  Identities=12%  Similarity=0.131  Sum_probs=63.3

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEc--CChhhHHHHHHcCCCEEEcCCCCCcc------------------
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD--RSSKRFEEAKKFGVTDFVNTSEHDRP------------------  253 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~--~~~~~~~~~~~~G~~~vv~~~~~~~~------------------  253 (361)
                      .+..+|+...+|..|.+.+..|+..|..-++.+.  .+.+|.+.++.+|++.+......+..                  
T Consensus        73 ~~~~~vv~assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~~~Ga~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (331)
T d1tdja1          73 QKAHGVITASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRGFGGEVLLHGANFDEAKAKAIELSQQQGFTWVPP  152 (331)
T ss_dssp             SCSSSCEEEECSSSHHHHHHHHHHTTCCEEEECCSSCCHHHHHHHHHHSCEEECCCSSHHHHHHHHHHHHHHHCCEECCS
T ss_pred             CCCCeeeecccchhHHHHHHhhccccccceeeccccchhHHHHHHHhcCCEEEEcCcccccchhhhhhhhhcCCCccccc
Confidence            4455566666788999999999999985555553  34578888899999765332221100                  


Q ss_pred             ------------HHHHHHHHcCCCccEEEEccCChHHHH---HHHHHhcCCCcEEEEEc
Q 018072          254 ------------IQEVIAEMTNGGVDRSVECTGNIDNMI---SAFECVHDGWGVAVLVG  297 (361)
Q Consensus       254 ------------~~~~i~~~~~~g~Dvvid~~g~~~~~~---~~~~~l~~~~G~iv~~g  297 (361)
                                  +...+.+. .+.+|.||-++|+..++.   ..++.+.+. .+++.+-
T Consensus       153 ~~~~~~~~g~~t~~~Ei~~q-~~~~D~vv~~~G~GG~~aG~~~~~~~~~~~-~~ii~ve  209 (331)
T d1tdja1         153 FDHPMVIAGQGTLALELLQQ-DAHLDRVFVPVGGGGLAAGVAVLIKQLMPQ-IKVIAVE  209 (331)
T ss_dssp             SCCHHHHHHHHHHHHHHHHH-CTTCCEEEEECSSSHHHHHHHHHHHHHCTT-CEEEEEE
T ss_pred             cCChHHhhhhhhHHHHHHHh-cCCCCEEEEeCChhHHHHHHHHHHHHhCCC-cEEEEec
Confidence                        11111111 126899999998755543   455555565 6777663

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=84.09  E-value=0.89  Score=33.98  Aligned_cols=38  Identities=18%  Similarity=0.171  Sum_probs=31.5

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHHH
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFEE  235 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~~  235 (361)
                      +|.|+|+|.+|...+..+...+. ..++.+|.++++.+.
T Consensus         2 KI~IIGaG~VG~~la~~l~~~~l~~el~L~Di~~~~~~~   40 (142)
T d1guza1           2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQG   40 (142)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHH
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCceEEEeccccccchh
Confidence            58899999999998888877774 689999999877554

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=83.98  E-value=6.3  Score=29.25  Aligned_cols=43  Identities=26%  Similarity=0.332  Sum_probs=27.5

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcC
Q 018072          197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFG  240 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G  240 (361)
                      ++|-++|.|.+|...+.-+...|. .++.-+..++..+..++.+
T Consensus         1 ekIg~IGlG~MG~~ma~~L~~~g~-~~~~~~~~~~~~~~~~~~~   43 (156)
T d2cvza2           1 EKVAFIGLGAMGYPMAGHLARRFP-TLVWNRTFEKALRHQEEFG   43 (156)
T ss_dssp             CCEEEECCSTTHHHHHHHHHTTSC-EEEECSSTHHHHHHHHHHC
T ss_pred             CeEEEEeHHHHHHHHHHHHHhCCC-EEEEeCCHHHHHHHHHHcC
Confidence            468899999999887776666665 5544444444444444443

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=83.74  E-value=1.4  Score=32.07  Aligned_cols=61  Identities=21%  Similarity=0.161  Sum_probs=48.6

Q ss_pred             hhhhcCCCCCCEEEEE-cCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcC
Q 018072          187 TLNVAKPERGSSVAVF-GLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNT  247 (361)
Q Consensus       187 ~~~~~~~~~g~~VlI~-G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~  247 (361)
                      +++.++++.-+.+++. ..-..-++++++++..|..++++...+++..+.++++|++.++++
T Consensus        57 ~l~~~~i~~a~~vv~~t~~d~~N~~~~~~~k~~~~~~iI~~~~~~~~~~~l~~~G~d~vi~p  118 (132)
T d1lssa_          57 TLEDAGIEDADMYIAVTGKEEVNLMSSLLAKSYGINKTIARISEIEYKDVFERLGVDVVVSP  118 (132)
T ss_dssp             HHHHTTTTTCSEEEECCSCHHHHHHHHHHHHHTTCCCEEEECSSTTHHHHHHHTTCSEEECH
T ss_pred             hhhhcChhhhhhhcccCCcHHHHHHHHHHHHHcCCceEEEEecCHHHHHHHHHCCCCEEECH
Confidence            3566777777766665 334667788899999998889998888899999999999998864

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=83.72  E-value=0.97  Score=34.02  Aligned_cols=37  Identities=30%  Similarity=0.521  Sum_probs=30.6

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcC-CCeEEEEcCChhhH
Q 018072          197 SSVAVFGLGAVGLAAAEGARIAG-ASRIIGVDRSSKRF  233 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~g-~~~Vi~~~~~~~~~  233 (361)
                      .+|.|+|+|.+|...+..+...| +..++.+|.++++.
T Consensus         2 kKI~IIGaG~VG~~~a~~l~~~~~~~elvL~Di~~~~~   39 (146)
T d1hyha1           2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKV   39 (146)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHH
T ss_pred             CeEEEECcCHHHHHHHHHHHhcCCCceEEEEecccchh
Confidence            47889999999988888777766 46899999998874

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=83.63  E-value=0.86  Score=34.11  Aligned_cols=39  Identities=18%  Similarity=0.183  Sum_probs=31.0

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHH
Q 018072          197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEE  235 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~  235 (361)
                      .+|.|+|+|.+|...+.++...+...++.+|.++++.+-
T Consensus         2 ~KI~IIGaG~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~   40 (142)
T d1uxja1           2 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVPQG   40 (142)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHTCSEEEEECSSSSHHHH
T ss_pred             CeEEEECCCHHHHHHHHHHHhCCcceEEEEeeccccchh
Confidence            378899999999988777776776689999998876443

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=83.54  E-value=1.7  Score=33.41  Aligned_cols=74  Identities=12%  Similarity=0.011  Sum_probs=42.6

Q ss_pred             CCCEEEEEcCCHHHHH--HHHHHHHc-C--CCeEEEEcCChhhHHHH--------HHcCCCEEEcCCCCCccHHHHHHHH
Q 018072          195 RGSSVAVFGLGAVGLA--AAEGARIA-G--ASRIIGVDRSSKRFEEA--------KKFGVTDFVNTSEHDRPIQEVIAEM  261 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~--a~~~a~~~-g--~~~Vi~~~~~~~~~~~~--------~~~G~~~vv~~~~~~~~~~~~i~~~  261 (361)
                      +.-+|.|+|+|.+|..  ...+++.. .  ...++.+|.+++|++..        ...+....+.... +  ..+.+   
T Consensus         2 k~~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d--~~eal---   75 (167)
T d1u8xx1           2 KSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATT-D--PEEAF---   75 (167)
T ss_dssp             CCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEES-C--HHHHH---
T ss_pred             CCceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecC-C--hhhcc---
Confidence            3447899999866533  33333322 2  13899999999987632        2234442222111 1  22222   


Q ss_pred             cCCCccEEEEccCCh
Q 018072          262 TNGGVDRSVECTGNI  276 (361)
Q Consensus       262 ~~~g~Dvvid~~g~~  276 (361)
                        .+.|+|+.++|.+
T Consensus        76 --~~AD~Vvitag~~   88 (167)
T d1u8xx1          76 --TDVDFVMAHIRVG   88 (167)
T ss_dssp             --SSCSEEEECCCTT
T ss_pred             --CCCCEEEECCCcC
Confidence              3689999999863

>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Galactose/lactose metabolism regulatory protein GAL80
species: Yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=83.21  E-value=1.7  Score=35.26  Aligned_cols=96  Identities=9%  Similarity=-0.005  Sum_probs=58.9

Q ss_pred             CEEEEEcCCH----HHHHHHHHHHHc--CCCeEE-EEcCChhhHHH-HHHcCCCEEEcCCCCCccHHHHHHHHcCCCccE
Q 018072          197 SSVAVFGLGA----VGLAAAEGARIA--GASRII-GVDRSSKRFEE-AKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDR  268 (361)
Q Consensus       197 ~~VlI~G~g~----vG~~a~~~a~~~--g~~~Vi-~~~~~~~~~~~-~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dv  268 (361)
                      =+|.|+|+|.    ++...+...+..  ++ +++ +.+++.++.+. +++++......+.+    +.+.+   .+..+|+
T Consensus        17 irvgiIG~G~~~~~~~~~h~~ai~~~~~~~-~ivav~d~~~~~~~~~~~~~~~~~~~~~~~----~~~l~---~~~~iD~   88 (237)
T d2nvwa1          17 IRVGFVGLTSGKSWVAKTHFLAIQQLSSQF-QIVALYNPTLKSSLQTIEQLQLKHATGFDS----LESFA---QYKDIDM   88 (237)
T ss_dssp             EEEEEECCCSTTSHHHHTHHHHHHHTTTTE-EEEEEECSCHHHHHHHHHHTTCTTCEEESC----HHHHH---HCTTCSE
T ss_pred             eEEEEEecCccccHHHHHHHHHHHhcCCCe-EEEEEEcCCHHHHHHHHHhcccccceeecc----hhhcc---cccccce
Confidence            5789999865    445555555554  35 555 46777776554 46677653322222    44333   2347999


Q ss_pred             EEEccCChHHHHHHHHHhcCC----CcEEEEEcCCC
Q 018072          269 SVECTGNIDNMISAFECVHDG----WGVAVLVGVPS  300 (361)
Q Consensus       269 vid~~g~~~~~~~~~~~l~~~----~G~iv~~g~~~  300 (361)
                      |+.++......+.+..+|..+    .++=+++-.+-
T Consensus        89 V~i~tp~~~h~~~~~~al~aG~~~~~~k~V~~EKPl  124 (237)
T d2nvwa1          89 IVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEWAL  124 (237)
T ss_dssp             EEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEESSS
T ss_pred             eeccCCCcchhhHHHHHHHhcccccCCceEEEeccc
Confidence            999998877778888777642    03456775433

>d3cmco1 c.2.1.3 (O:0-148,O:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Bacillus stearothermophilus, nca 1503 [TaxId: 1422]

Probab=82.58  E-value=0.75  Score=35.72  Aligned_cols=97  Identities=22%  Similarity=0.364  Sum_probs=57.2

Q ss_pred             EEEEEcCCHHHHHHHHHHHHc-CCCeEEEEc--CChhhHHHHHHcCC-------CE-------------EEcCCCCCccH
Q 018072          198 SVAVFGLGAVGLAAAEGARIA-GASRIIGVD--RSSKRFEEAKKFGV-------TD-------------FVNTSEHDRPI  254 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~-g~~~Vi~~~--~~~~~~~~~~~~G~-------~~-------------vv~~~~~~~~~  254 (361)
                      +|.|.|-|-+|.+....+... .. .|+++-  .+.+.+.++-++.-       +.             +..+...+   
T Consensus         3 kIgINGfGRIGR~v~R~~l~~~~~-~ivaINd~~d~~~~ayll~yDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~---   78 (171)
T d3cmco1           3 KVGINGFGRIGRNVFRAALKNPDI-EVVAVNDLTDANTLAHLLKYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAERD---   78 (171)
T ss_dssp             EEEEESCSHHHHHHHHHHTTCTTE-EEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECCSS---
T ss_pred             EEEEECCCHHHHHHHHHHhhCCCc-EEEEEcCCCCHHHHhhhhcccccCCcccccccccCCCEEeCCcceeeEecCC---
Confidence            578899999999998877544 34 566662  23344444433211       10             10111111   


Q ss_pred             HHHHHHHcC-C-CccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCCCC
Q 018072          255 QEVIAEMTN-G-GVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKD  302 (361)
Q Consensus       255 ~~~i~~~~~-~-g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~  302 (361)
                         ..++.. + ++|+|+||+|.-...+.+...|..+ -+-|++..+...
T Consensus        79 ---p~~i~W~~~~vDiViEcTG~f~t~~~~~~hl~~g-akkViiSap~~d  124 (171)
T d3cmco1          79 ---PENLAWGEIGVDIVVESTGRFTKREDAAKHLEAG-AKKVIISAPAKN  124 (171)
T ss_dssp             ---GGGCCTGGGTCCEEEECSSSCCBHHHHTHHHHTT-CSEEEESSCCBS
T ss_pred             ---HHHccccccCCcEEEEecCccCCHHHHHHHHhCC-CceEEEeccccc
Confidence               111111 2 7999999999877788888888875 655666655433

>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=82.57  E-value=3.4  Score=36.22  Aligned_cols=57  Identities=21%  Similarity=0.167  Sum_probs=42.8

Q ss_pred             CCCCCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEc--CChhhHHHHHHcCCCEEEcCC
Q 018072          192 KPERGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD--RSSKRFEEAKKFGVTDFVNTS  248 (361)
Q Consensus       192 ~~~~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~--~~~~~~~~~~~~G~~~vv~~~  248 (361)
                      ++++|.+|+-..+|..|.+.+..|+.+|.+-++.+.  .+++|.+.++.+|++.+....
T Consensus       140 ~~~~g~~VVeaSSGN~GiAlA~~aa~lGik~~Iv~P~~~~~~K~~~ira~GAeVi~~~~  198 (382)
T d1wkva1         140 RVEKGSLVADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVDPE  198 (382)
T ss_dssp             TSCTTCEEEEECCHHHHHHHHHHHHHTTCEEEEEEETTSCHHHHHHHHHTTCEEEEETT
T ss_pred             ccCCCCEEEEeCCcHHHHHHHHHHHHcCCCEEEEeeccccccccccccccCcceeecCc
Confidence            477887655456699999999999999995445553  355788889999998765543

>d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GidA-like
domain: GidA-related protein TTHA1897
species: Thermus thermophilus [TaxId: 274]

Probab=82.38  E-value=0.79  Score=37.43  Aligned_cols=32  Identities=25%  Similarity=0.207  Sum_probs=26.8

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  230 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~  230 (361)
                      .|+|+|+|+.|+-|+..|.++|. ++..++.+-
T Consensus         4 DVIVIGgG~AG~eAA~~aAR~G~-ktllit~~~   35 (230)
T d2cula1           4 QVLIVGAGFSGAETAFWLAQKGV-RVGLLTQSL   35 (230)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEEESCG
T ss_pred             cEEEECcCHHHHHHHHHHHHCCC-cEEEEEecc
Confidence            37888999999999999999999 666665553

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=82.13  E-value=1.5  Score=33.56  Aligned_cols=40  Identities=23%  Similarity=0.298  Sum_probs=34.0

Q ss_pred             CCCCEEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhH
Q 018072          194 ERGSSVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRF  233 (361)
Q Consensus       194 ~~g~~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~  233 (361)
                      .+..+|.|+|+|.+|...+..+...|. ..++.+|.++++.
T Consensus        18 ~~~~KV~IIGaG~VG~~~A~~l~~~~l~~ElvLiD~~~~~a   58 (160)
T d1i0za1          18 VPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKL   58 (160)
T ss_dssp             CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHH
T ss_pred             CCCCeEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccchh
Confidence            445699999999999999998888885 6899999987764

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=81.98  E-value=2.5  Score=32.52  Aligned_cols=94  Identities=24%  Similarity=0.386  Sum_probs=60.8

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEE-cC--ChhhHHHHHHc----CC---CE-------EEcC------CCCC---
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGV-DR--SSKRFEEAKKF----GV---TD-------FVNT------SEHD---  251 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~-~~--~~~~~~~~~~~----G~---~~-------vv~~------~~~~---  251 (361)
                      +|.|.|-|-+|+++...+...+. .|+++ +.  +.+.+.++-++    |.   +.       .++-      ...+   
T Consensus         2 kIgINGfGRIGR~~~R~~~~~~~-~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p~~   80 (169)
T d1dssg1           2 KIGINGFGRIGRLVLRAALEMGA-QVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPEN   80 (169)
T ss_dssp             CEEEECCSHHHHHHHHHHHHHTC-CEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred             eEEEECCcHHHHHHHHHHHhCCC-cEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCChHH
Confidence            57899999999999998888888 55555 43  34566666443    11   11       1110      0001   


Q ss_pred             ccHHHHHHHHcCCCccEEEEccCChHHHHHHHHHhcCCCcEEEEEcCCC
Q 018072          252 RPIQEVIAEMTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPS  300 (361)
Q Consensus       252 ~~~~~~i~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~g~~~  300 (361)
                      -+|.       +.++|+|+||+|.-...+.+...+..+ -+-|++..+.
T Consensus        81 i~W~-------~~gvD~ViEcTG~f~~~~~~~~hl~~g-akkViisaP~  121 (169)
T d1dssg1          81 IPWS-------KAGAEYIVESTGVFTTIEKASAHFKGG-AKKVIISAPS  121 (169)
T ss_dssp             CCHH-------HHTCCEEEECSSSCCSHHHHGGGGTTT-CSEEEESSCC
T ss_pred             CCcc-------ccCCCEEEecCceEcCHHHHHHHHhcC-CceEeecCCc
Confidence            1121       117999999999877788888888875 6667776544

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=81.85  E-value=0.91  Score=38.43  Aligned_cols=32  Identities=31%  Similarity=0.431  Sum_probs=29.0

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEc
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVD  227 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~  227 (361)
                      .|.+|+|.|.|.||..+++.+...|+ +|++++
T Consensus        35 ~gktvaIqGfGnVG~~~A~~L~e~Ga-kvv~vs   66 (293)
T d1hwxa1          35 GDKTFAVQGFGNVGLHSMRYLHRFGA-KCVAVG   66 (293)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEE
Confidence            57899999999999999999999999 787774

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=81.81  E-value=1.2  Score=33.55  Aligned_cols=48  Identities=19%  Similarity=0.068  Sum_probs=38.1

Q ss_pred             hhhhhhhhhhcCCCCCCEEEEE--cCCHHHHHHHHHHHHcCCCeEEEEcCChh
Q 018072          181 STGLGATLNVAKPERGSSVAVF--GLGAVGLAAAEGARIAGASRIIGVDRSSK  231 (361)
Q Consensus       181 ~ta~~a~~~~~~~~~g~~VlI~--G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~  231 (361)
                      .|...++  ..+.+++..++|+  |+|.+|+-+++.+..+|. +|+.+++.+.
T Consensus        26 ~t~~d~l--~~~~~~~~~vvi~d~ggg~ig~e~A~~la~~G~-~Vtlv~~~~~   75 (156)
T d1djqa2          26 LTPEQVM--DGKKKIGKRVVILNADTYFMAPSLAEKLATAGH-EVTIVSGVHL   75 (156)
T ss_dssp             ECHHHHH--HTCSCCCSEEEEEECCCSSHHHHHHHHHHHTTC-EEEEEESSCT
T ss_pred             ECHHHHh--cCccccCCceEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCc
Confidence            3555442  3567888899988  779999999999999999 8999877654

>d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TRM1-like
domain: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=81.49  E-value=2.8  Score=36.71  Aligned_cols=93  Identities=14%  Similarity=0.088  Sum_probs=61.0

Q ss_pred             EEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHH----cCCCEE--------------EcCCCCCccHHHHHHHHc
Q 018072          201 VFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKK----FGVTDF--------------VNTSEHDRPIQEVIAEMT  262 (361)
Q Consensus       201 I~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~----~G~~~v--------------v~~~~~~~~~~~~i~~~~  262 (361)
                      +-+.++.|..++.+|+..|++.|++.|.+++..+.+++    .+....              +.....+  ....+ ...
T Consensus        50 LD~~sasG~rsiRya~E~~~~~V~~nDis~~A~~~i~~N~~lN~~~~~~~~~~~~~~~~~~~~~~~~~D--a~~~~-~~~  126 (375)
T d2dula1          50 LDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDD--ANRLM-AER  126 (375)
T ss_dssp             EESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESC--HHHHH-HHS
T ss_pred             EEcCCCccHHHHHHHHhCCCCEEEEecCCHHHHHHHHHHHHhcCccccccccccccccccceeEeehhh--hhhhh-Hhh
Confidence            33557778899999999998899999999999988865    232211              1111111  22222 223


Q ss_pred             CCCccE-EEEccCChH-HHHHHHHHhcCCCcEEEEEc
Q 018072          263 NGGVDR-SVECTGNID-NMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       263 ~~g~Dv-vid~~g~~~-~~~~~~~~l~~~~G~iv~~g  297 (361)
                      +..||+ .+|-.|++. .++.|++.++.+ |.+....
T Consensus       127 ~~~fDvIDiDPfGs~~pfldsAi~a~~~~-Gll~vTa  162 (375)
T d2dula1         127 HRYFHFIDLDPFGSPMEFLDTALRSAKRR-GILGVTA  162 (375)
T ss_dssp             TTCEEEEEECCSSCCHHHHHHHHHHEEEE-EEEEEEE
T ss_pred             cCcCCcccCCCCCCcHHHHHHHHHHhccC-CEEEEEe
Confidence            337894 467777744 578999999986 7776663

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=81.45  E-value=0.94  Score=35.63  Aligned_cols=87  Identities=14%  Similarity=0.128  Sum_probs=57.7

Q ss_pred             CCCEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCccEEEEccC
Q 018072          195 RGSSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSKRFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVDRSVECTG  274 (361)
Q Consensus       195 ~g~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~Dvvid~~g  274 (361)
                      .+.+|.|+|.|.+|...++.++..|. +|++.++......       .......    ++.+.++.     .|+|+.+..
T Consensus        43 ~~~~vgiiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~-------~~~~~~~----~l~ell~~-----sDii~i~~p  105 (188)
T d1sc6a1          43 RGKKLGIIGYGHIGTQLGILAESLGM-YVYFYDIENKLPL-------GNATQVQ----HLSDLLNM-----SDVVSLHVP  105 (188)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCCCC-------TTCEECS----CHHHHHHH-----CSEEEECCC
T ss_pred             cceEEEEeecccchhhhhhhcccccc-eEeeccccccchh-------hhhhhhh----hHHHHHhh-----ccceeeccc
Confidence            57899999999999999999999999 9999987543210       1111111    14433322     578877654


Q ss_pred             -ChHH----HHHHHHHhcCCCcEEEEEcCC
Q 018072          275 -NIDN----MISAFECVHDGWGVAVLVGVP  299 (361)
Q Consensus       275 -~~~~----~~~~~~~l~~~~G~iv~~g~~  299 (361)
                       .+++    =...++.|+++ ..++.++-.
T Consensus       106 lt~~T~~li~~~~l~~mk~~-a~lIN~aRG  134 (188)
T d1sc6a1         106 ENPSTKNMMGAKEISLMKPG-SLLINASRG  134 (188)
T ss_dssp             SSTTTTTCBCHHHHHHSCTT-EEEEECSCS
T ss_pred             CCcchhhhccHHHHhhCCCC-CEEEEcCcH
Confidence             2222    24777888886 788777643

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.37  E-value=1.4  Score=40.68  Aligned_cols=33  Identities=15%  Similarity=0.229  Sum_probs=28.9

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCC
Q 018072          197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRS  229 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~  229 (361)
                      .+|+|+|+|++|.-++.-+.+.|..+++.+|.+
T Consensus        26 s~VlvvG~gglG~Ei~knLvl~GVg~itivD~d   58 (529)
T d1yova1          26 AHVCLINATATGTEILKNLVLPGIGSFTIIDGN   58 (529)
T ss_dssp             CEEEECCCSHHHHHHHHHHHTTTCSEEEEECCS
T ss_pred             CCEEEECCCHHHHHHHHHHHHhcCCEEEEEcCC
Confidence            589999999999998888888899899998664

>d1aoga1 c.3.1.5 (A:3-169,A:287-357) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=81.30  E-value=0.8  Score=36.74  Aligned_cols=30  Identities=33%  Similarity=0.366  Sum_probs=25.5

Q ss_pred             EEEEcCCHHHHHHHHHHHHcCCCeEEEEcC
Q 018072          199 VAVFGLGAVGLAAAEGARIAGASRIIGVDR  228 (361)
Q Consensus       199 VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~  228 (361)
                      |+|+|+||.|+.++..|..+|.++|++++.
T Consensus         6 viIIG~GpaGl~aA~~aa~~g~k~V~iie~   35 (238)
T d1aoga1           6 LVVIGAGSGGLEAAWNAATLYKKRVAVIDV   35 (238)
T ss_dssp             EEEECCSHHHHHHHHHHHHTSCCCEEEEES
T ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEEe
Confidence            788899999999988888888767888764

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=81.19  E-value=1.3  Score=32.92  Aligned_cols=37  Identities=30%  Similarity=0.470  Sum_probs=29.9

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCC-CeEEEEcCChhhHH
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGA-SRIIGVDRSSKRFE  234 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~-~~Vi~~~~~~~~~~  234 (361)
                      +|.|+|+|.+|...+..+...+. ..+..+|.++++.+
T Consensus         2 KI~IIGaG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~   39 (140)
T d1a5za1           2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAE   39 (140)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHH
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCCEEEEEeccccccc
Confidence            58899999999988777766664 58999999987654

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.79  E-value=0.82  Score=39.16  Aligned_cols=32  Identities=31%  Similarity=0.330  Sum_probs=28.0

Q ss_pred             EE-EEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCh
Q 018072          198 SV-AVFGL-GAVGLAAAEGARIAGASRIIGVDRSS  230 (361)
Q Consensus       198 ~V-lI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~~  230 (361)
                      +| ||+|+ |.+|...+..+...|. +|+++++..
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~-~V~~i~r~~   35 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGY-EVHGIVRRS   35 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCC
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcC-EEEEEECCC
Confidence            57 89998 9999999998888999 999998854

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=80.37  E-value=9  Score=29.96  Aligned_cols=94  Identities=17%  Similarity=0.130  Sum_probs=56.5

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCChh----------hHHHHHHcCCCEEEcCCCCCccHHHHHHHHcCCCcc
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSSK----------RFEEAKKFGVTDFVNTSEHDRPIQEVIAEMTNGGVD  267 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~~----------~~~~~~~~G~~~vv~~~~~~~~~~~~i~~~~~~g~D  267 (361)
                      +++++|.+.+|..+++.+...|. .|.++-+.++          -.+++++.|.......+-.+.++.+.++.+   .+|
T Consensus         2 kiv~~~~~~~g~~~l~~L~~~g~-~I~~Vvt~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~i~~~---~~D   77 (203)
T d2blna2           2 KTVVFAYHDMGCLGIEALLAAGY-EISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNVNHPLWVERIAQL---SPD   77 (203)
T ss_dssp             EEEEEECHHHHHHHHHHHHHTTC-EEEEEECCCC------CCCCHHHHHHHHTCCEECCSCCCSHHHHHHHHHT---CCS
T ss_pred             eEEEEecCHHHHHHHHHHHHCCC-CEEEEEcCCCCCCcccccCHHHHHHHHcCCcceecccccchhhhhhhhhh---ccc
Confidence            57888998899999999988898 6655533322          235566777764332222233344444443   689


Q ss_pred             EEEEccCChHHHHHHHHHhcCCCcEEEEEc
Q 018072          268 RSVECTGNIDNMISAFECVHDGWGVAVLVG  297 (361)
Q Consensus       268 vvid~~g~~~~~~~~~~~l~~~~G~iv~~g  297 (361)
                      +++....+ ..+..-+-...+. |.+.+-.
T Consensus        78 lii~~g~~-~ii~~~il~~~~~-~~iN~H~  105 (203)
T d2blna2          78 VIFSFYYR-HLIYDEILQLAPA-GAFNLHG  105 (203)
T ss_dssp             EEEEESCC-SCCCHHHHTTCTT-CEEEEES
T ss_pred             ceeeeecc-cchhcccchhhHH-HHHHHhh
Confidence            99877654 3444333344455 7775554

>d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=80.37  E-value=0.83  Score=37.71  Aligned_cols=33  Identities=30%  Similarity=0.306  Sum_probs=28.0

Q ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 018072          197 SSVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  230 (361)
Q Consensus       197 ~~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~  230 (361)
                      -.++|+|+|+.|+.++..+..+|. +|++++..+
T Consensus        43 yDvvVIGgG~aG~~aA~~~a~~G~-kv~vve~~~   75 (261)
T d1mo9a1          43 YDAIFIGGGAAGRFGSAYLRAMGG-RQLIVDRWP   75 (261)
T ss_dssp             BSEEEECCSHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             CCEEEECCCHHHHHHHHHHHHCCC-eEEEEeccC
Confidence            358888999999999999999999 788887654

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=80.31  E-value=4.9  Score=34.59  Aligned_cols=31  Identities=26%  Similarity=0.201  Sum_probs=24.5

Q ss_pred             CCEEEEEcC-CHHHHHHHH-HHHHcCCCeEEEEc
Q 018072          196 GSSVAVFGL-GAVGLAAAE-GARIAGASRIIGVD  227 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~-~a~~~g~~~Vi~~~  227 (361)
                      +-+|||+|+ |.+|...+. |++..|. .|+++|
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~-~V~~~D   34 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNH-SVVIVD   34 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCC-EEEEEE
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCC-EEEEEe
Confidence            457999988 999977665 5566787 899986

>d1feca1 c.3.1.5 (A:1-169,A:287-357) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=80.31  E-value=0.64  Score=37.72  Aligned_cols=33  Identities=27%  Similarity=0.334  Sum_probs=26.5

Q ss_pred             EEEEEcCCHHHHHHHHHHHHcCCCeEEEEcCCh
Q 018072          198 SVAVFGLGAVGLAAAEGARIAGASRIIGVDRSS  230 (361)
Q Consensus       198 ~VlI~G~g~vG~~a~~~a~~~g~~~Vi~~~~~~  230 (361)
                      -|+|+|+|+.|+.++..|...|.++|.+++..+
T Consensus         5 DvvVIG~GpAG~~aAi~aa~~g~k~V~vie~~~   37 (240)
T d1feca1           5 DLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQK   37 (240)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHHCCCEEEEESCS
T ss_pred             CEEEECCCHHHHHHHHHHHHcCCCEEEEEEEec
Confidence            478889999999998888888876788887543

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=80.16  E-value=0.89  Score=34.49  Aligned_cols=135  Identities=19%  Similarity=0.094  Sum_probs=71.9

Q ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCC--CeEEEEcCChhhHHHHHHcCCCE--EEcCCCCCccHHHHHHHHcCCCccEEE
Q 018072          196 GSSVAVFGL-GAVGLAAAEGARIAGA--SRIIGVDRSSKRFEEAKKFGVTD--FVNTSEHDRPIQEVIAEMTNGGVDRSV  270 (361)
Q Consensus       196 g~~VlI~G~-g~vG~~a~~~a~~~g~--~~Vi~~~~~~~~~~~~~~~G~~~--vv~~~~~~~~~~~~i~~~~~~g~Dvvi  270 (361)
                      |-+|.|+|+ |-+|.-.++++.....  ..+..+.++...-+... .....  ..+..+.+           ....|+++
T Consensus         1 g~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~~~~-~~~~~~~~~~~~~~~-----------~~~~d~~f   68 (154)
T d2gz1a1           1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLK-FKDQDITIEETTETA-----------FEGVDIAL   68 (154)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTCEEE-ETTEEEEEEECCTTT-----------TTTCSEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHcCCCCceEEEEeccccccccccc-ccCCcccccccchhh-----------hhhhhhhh
Confidence            458999999 9999999999987743  34444433321111000 11111  11111111           12689999


Q ss_pred             EccCChHHHHHHHHHhcCCCcEEEEEcCCCC-CceeecCh-----hhhccccEEEEeeecCCCcCCcHHHHHHHHHcCCc
Q 018072          271 ECTGNIDNMISAFECVHDGWGVAVLVGVPSK-DAVFMTKP-----INVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKVI  344 (361)
Q Consensus       271 d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~-~~~~~~~~-----~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~l  344 (361)
                      -+.+.......+.+.+..+ -+++..+..-. ....++..     ..+.+...++.. -|.+  ...+.-+..+++++.+
T Consensus        69 ~~~~~~~s~~~~~~~~~~~-~~VIDlSsdfR~~~~~~~~~pe~n~~~~~~~~~iIAn-PgC~--tt~i~~l~PL~~~~li  144 (154)
T d2gz1a1          69 FSAGSSTSAKYAPYAVKAG-VVVVDNTSYFRQNPDVPLVVPEVNAHALDAHNGIIAC-PNAA--WNSVQIAETLHERGLV  144 (154)
T ss_dssp             ECSCHHHHHHHHHHHHHTT-CEEEECSSTTTTCTTSCBCCHHHHGGGGGGCCSEEEC-CCTH--HHHHHHHHHHHHTTCC
T ss_pred             hccCccchhhHHhhhcccc-ceehhcChhhhccCCcccccchhhHHHhcCcCceEEC-CCCH--HHHHHHHHHHHHhcCC
Confidence            9998866777777777776 78888764321 11222111     111122233322 2222  2334446677888887


Q ss_pred             cc
Q 018072          345 RF  346 (361)
Q Consensus       345 ~~  346 (361)
                      +.
T Consensus       145 k~  146 (154)
T d2gz1a1         145 RP  146 (154)
T ss_dssp             SC
T ss_pred             Cc
Confidence            65

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=80.11  E-value=0.65  Score=39.30  Aligned_cols=32  Identities=22%  Similarity=0.207  Sum_probs=26.0

Q ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCC
Q 018072          197 SSVAVFGL-GAVGLAAAEGARIAGASRIIGVDRS  229 (361)
Q Consensus       197 ~~VlI~G~-g~vG~~a~~~a~~~g~~~Vi~~~~~  229 (361)
                      .+|||+|+ |.+|...+..+...|. .+++++..
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~-~vi~~~~~   35 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGD-VELVLRTR   35 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTT-EEEECCCT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcC-EEEEecCc
Confidence            37999998 9999999998888887 67666443