Citrus Sinensis ID: 018075

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-
Protein Sequence
MAEAIRDDEGDKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL
Secondary Structure (PSIPRED)
cccccccccccccccEEEEEEEcccEEEEEEcccccccccEEEEEEEEEEEccccccccccccccccccccEEccccccEEEEEEcccccccccccEEEEcccccccccHHHHccccccccccEEEEccccccccccEEEEccccEEEcccccccccHHHHHHHHHHHHHHHHcccccccEEEEEcccHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHccccEEEEcccccccHHHHHHHHHHHccccccEEEEccccHHHHHHHHHHHccccEEEEEccccccccccHHHHHccccEEEEEEEccccHHHHHHHHHcccccccccEEEEEcccHHHHHHHHHHHHcccccEEEEEEc
Secondary Structure Prediction (SSPRO)
cccccccccEEEcHcEEEEEEEccEEEEEEcccccccccEEEEEEEEEEEcHHHHHHHHHcEccccEccccEEcccEEEEEEEEEcccccccccccEEEEccEEcccccHHHHcccHHHccccEEccEccEccccEcEEEEEHHHEEEccccccHHHHHcHHHHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHccccEEEEcccccccHHHHHHHHHHHccccccEEEEccccHHHHHHHHHHcccccEEEEcccccccccccHHHHHccccEEEEcccccccHHHHHHHHHccccccHHHEEEEEEHHHHHHHHHHHHHHcccccEEEEEEc
Coil and Loop (DISEMBL)
maeairddegdkNQNMAAWLLGIktlkiqpyhlptlgpqDVKVRIKALGicgsdvhhfktmrcanfivkkpmvigHECAGIIEEVgsevkslevgdrvalepgiscghcslckagsynlcpemrffgspptngslahkvvhpaklcyklpdnvsleegamceplsvgvhacrranvgpetnvmimgsGPIGLVTLLAARafgapriiitdvDVQRLSIARNlgadetakvstdiedvdtDVGKIQNamgsgidvsfdcvgfdktmstalnatrpggkvCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRsgkidvkplithrfgftqKEIEDAFEISAQGGNAIKVMFNL
Flexible Loop (DISEMBL)
maeairddegdknqNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIArnlgadetakvstdiedvDTDVGKIQNAMGSGIDVSFDCVGFDKTMStalnatrpggKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRsgkidvkpLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL
Low Complexity Region (SEG)
MAEAIRDDEGDKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL
Disordered region (IsUnstruct)
***************MAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKV****
Disordered Region (DISOPRED)
******************WLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL
Disordered Region (DISEMBL)
***********KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL
Disordered Region (DISPRO)
*******DEGDKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAEAIRDDEGDKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	361	2.2.26 [Sep-21-2011]
Q1PSI9	366	L-idonate 5-dehydrogenase	yes	no	0.963	0.950	0.821	1e-175
Q4R639	357	Sorbitol dehydrogenase OS	N/A	no	0.952	0.963	0.446	8e-84
Q00796	357	Sorbitol dehydrogenase OS	yes	no	0.950	0.960	0.454	3e-83
Q58D31	356	Sorbitol dehydrogenase OS	yes	no	0.950	0.963	0.448	2e-82
Q5R5F3	357	Sorbitol dehydrogenase OS	yes	no	0.952	0.963	0.452	5e-82
Q64442	357	Sorbitol dehydrogenase OS	yes	no	0.952	0.963	0.432	2e-81
P27867	357	Sorbitol dehydrogenase OS	yes	no	0.950	0.960	0.428	3e-81
P07846	354	Sorbitol dehydrogenase OS	N/A	no	0.941	0.960	0.445	9e-81
A1CFY8	358	Probable D-xylulose reduc	N/A	no	0.939	0.946	0.42	2e-72
Q5ARL6	359	Probable D-xylulose reduc	yes	no	0.947	0.952	0.414	7e-72

>sp|Q1PSI9|IDND_VITVI L-idonate 5-dehydrogenase OS=Vitis vinifera GN=VIT_16s0100g00290 PE=1 SV=2

 Score =  615 bits (1585), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 286/348 (82%), Positives = 326/348 (93%)

Query: 14  QNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMV 73
           +NMAAWLLGIKTLKIQPY LP+LGP DVKVRIKA+GICGSDVHHFKTMRCANFIVKKPMV
Sbjct: 19  ENMAAWLLGIKTLKIQPYILPSLGPYDVKVRIKAVGICGSDVHHFKTMRCANFIVKKPMV 78

Query: 74  IGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNG 133
           IGHECAGIIEEVGSEVK+L  GDRVALEPGISC  CSLC+ G YNLC EM+FFGSPPTNG
Sbjct: 79  IGHECAGIIEEVGSEVKNLVAGDRVALEPGISCNRCSLCRNGQYNLCREMKFFGSPPTNG 138

Query: 134 SLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLV 193
           SLA++VVHP+ LC+KLPDNVSLEEGAMCEPLSVG+HACRRANVGPETNV+IMGSGPIGLV
Sbjct: 139 SLANQVVHPSNLCFKLPDNVSLEEGAMCEPLSVGIHACRRANVGPETNVLIMGSGPIGLV 198

Query: 194 TLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGID 253
           T+LAARAFGAPRI++ DVD QRL+IA++LGAD+  +VST+I+D+D +V KIQ+ M +G+D
Sbjct: 199 TMLAARAFGAPRIVLVDVDDQRLAIAKDLGADDIIRVSTNIQDLDEEVAKIQSTMVTGVD 258

Query: 254 VSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWP 313
           VSFDCVGF+KTMSTALNATR GGKVCL+GLA++EMTV LTPAAAREVD++GIFRYR+TWP
Sbjct: 259 VSFDCVGFNKTMSTALNATRAGGKVCLVGLAQSEMTVPLTPAAAREVDIVGIFRYRNTWP 318

Query: 314 LCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361
           LC+EFLRSGKIDVKPLITHRF F+QK++E+AFE SA+GGNAIKVMFNL
Sbjct: 319 LCLEFLRSGKIDVKPLITHRFTFSQKDVEEAFETSARGGNAIKVMFNL 366

Involved in the catabolism of ascorbate to tartrate. The enzyme has no activity with NADP(+).
Vitis vinifera (taxid: 29760)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: nEC: 8

>sp|Q4R639|DHSO_MACFA Sorbitol dehydrogenase OS=Macaca fascicularis GN=SORD PE=2 SV=3

 Score =  310 bits (795), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 156/349 (44%), Positives = 230/349 (65%), Gaps = 5/349 (1%)

Query: 12  KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKP 71
           K +N++  + G   L+++ Y +P  GP +V +R+ ++GICGSDVH+++  R  NFIVKKP
Sbjct: 6   KPKNLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEEGRIGNFIVKKP 65

Query: 72  MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT 131
           MV+GHE +G +E+VGS VK L+ GDRVA+EPG+   +   CK+G YNL P + F  +PP 
Sbjct: 66  MVLGHEASGTVEKVGSLVKHLKPGDRVAIEPGVPRENDEFCKSGRYNLSPSIFFCATPPD 125

Query: 132 NGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIG 191
           +G+L     H A  CYKLPDNV+ EEGA+ EPLSVG+HACRR  V     V++ G+GPIG
Sbjct: 126 DGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHRVLVCGAGPIG 185

Query: 192 LVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG 251
           +V+LL A+A GA ++++TD+   RLS A+ +GAD   ++S   E      GK++  +G  
Sbjct: 186 VVSLLVAKAMGAAQVVVTDLSAPRLSKAKEIGADLVLQISK--ESPQEIAGKVEGLLGCK 243

Query: 252 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRST 311
            +V+ +C G + ++   + ATR GG + L+GL     T+ L  AA REVD+ G+FRY +T
Sbjct: 244 PEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTIPLLHAAVREVDIKGVFRYCNT 303

Query: 312 WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 360
           WP+ I  L S  +++KPL+THRF   +K +E AFE + + G  +K+M  
Sbjct: 304 WPVAISMLASKSVNIKPLVTHRFPL-EKALE-AFE-TFKKGLGLKIMLK 349

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Macaca fascicularis (taxid: 9541)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q00796|DHSO_HUMAN Sorbitol dehydrogenase OS=Homo sapiens GN=SORD PE=1 SV=4

 Score =  308 bits (790), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 158/348 (45%), Positives = 226/348 (64%), Gaps = 5/348 (1%)

Query: 12  KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKP 71
           K  N++  + G   L+++ Y +P  GP +V +R+ ++GICGSDVH+++  R  NFIVKKP
Sbjct: 6   KPNNLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKP 65

Query: 72  MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT 131
           MV+GHE +G +E+VGS VK L+ GDRVA+EPG    +   CK G YNL P + F  +PP 
Sbjct: 66  MVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPD 125

Query: 132 NGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIG 191
           +G+L     H A  CYKLPDNV+ EEGA+ EPLSVG+HACRR  V     V++ G+GPIG
Sbjct: 126 DGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIG 185

Query: 192 LVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG 251
           +VTLL A+A GA ++++TD+   RLS A+ +GAD   ++S   E       K++  +G  
Sbjct: 186 MVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISK--ESPQEIARKVEGQLGCK 243

Query: 252 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRST 311
            +V+ +C G + ++   + ATR GG + L+GL     TV L  AA REVD+ G+FRY +T
Sbjct: 244 PEVTIECTGAEASIQAGIYATRSGGNLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNT 303

Query: 312 WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 359
           WP+ I  L S  ++VKPL+THRF   +K +E AFE + + G  +K+M 
Sbjct: 304 WPVAISMLASKSVNVKPLVTHRFPL-EKALE-AFE-TFKKGLGLKIML 348

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q58D31|DHSO_BOVIN Sorbitol dehydrogenase OS=Bos taurus GN=SORD PE=2 SV=3

 Score =  306 bits (784), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 156/348 (44%), Positives = 227/348 (65%), Gaps = 5/348 (1%)

Query: 12  KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKP 71
           K +N++  + G   L+++ Y +P  GP +V +++ ++GICGSDVH+++  R  +F+VKKP
Sbjct: 5   KPENLSLVVHGPGDLRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRIGDFVVKKP 64

Query: 72  MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT 131
           MV+GHE +G + +VGS V+ L+ GDRVA+EPG        CK G YNL P + F  +PP 
Sbjct: 65  MVLGHEASGTVVKVGSLVRHLQPGDRVAIEPGAPRETDEFCKIGRYNLSPTIFFCATPPD 124

Query: 132 NGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIG 191
           +G+L     H A  CYKLPDNV+ EEGA+ EPLSVG+HACRRA V     V++ G+GPIG
Sbjct: 125 DGNLCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCGAGPIG 184

Query: 192 LVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG 251
           LV+LLAA+A GA ++++TD+   RLS A+ +GAD   ++S   E       K++  +GS 
Sbjct: 185 LVSLLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILQISN--ESPQEIAKKVEGLLGSK 242

Query: 252 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRST 311
            +V+ +C G + ++   + AT  GG + L+GL     +V L  AA REVD+ G+FRY +T
Sbjct: 243 PEVTIECTGVETSIQAGIYATHSGGTLVLVGLGSEMTSVPLVHAATREVDIKGVFRYCNT 302

Query: 312 WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 359
           WP+ I  L S  ++VKPL+THRF   +K +E AFE S + G  +KVM 
Sbjct: 303 WPMAISMLASKSVNVKPLVTHRFPL-EKALE-AFETSKK-GLGLKVMI 347

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q5R5F3|DHSO_PONAB Sorbitol dehydrogenase OS=Pongo abelii GN=SORD PE=2 SV=1

 Score =  304 bits (779), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 158/349 (45%), Positives = 224/349 (64%), Gaps = 5/349 (1%)

Query: 12  KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKP 71
           K  N++  + G   L+++ Y +P  GP +V +R+ ++GICGSDVH+++  R  NFIVKKP
Sbjct: 6   KPSNLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEDGRIGNFIVKKP 65

Query: 72  MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT 131
           MV+GHE +G +E+VGS VK L+ GDRVA+EPG    +   CK G YNL P + F  +PP 
Sbjct: 66  MVLGHEASGTVEKVGSLVKHLKPGDRVAIEPGAPRENDEFCKIGRYNLSPSIFFCATPPD 125

Query: 132 NGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIG 191
           +G+L     H A  CYKLPDNV+ EEGAM EPLSVG+HACRR  V     V++ G+GPIG
Sbjct: 126 DGNLCRFYKHNAAFCYKLPDNVTFEEGAMIEPLSVGIHACRRGGVTLGHKVLVCGAGPIG 185

Query: 192 LVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG 251
           +VTLL A+A GA ++++TD+   RLS A+ +GAD   ++S   E       K++  +G  
Sbjct: 186 MVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISK--ESPQEIARKVEGLLGCK 243

Query: 252 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRST 311
            +V+ +C G   ++   + AT  GG + L+GL     T+ L  AA REVD+ G+FRY +T
Sbjct: 244 PEVTIECTGAGASIQAGIYATHSGGTLVLVGLGSEMTTIPLLHAAIREVDIKGVFRYCNT 303

Query: 312 WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 360
           WP+ I  L S  ++VKPLITHRF   +K +E AFE + + G  +K+M  
Sbjct: 304 WPVAISMLASKSVNVKPLITHRFPL-EKALE-AFE-TFKKGLGLKIMLK 349

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|Q64442|DHSO_MOUSE Sorbitol dehydrogenase OS=Mus musculus GN=Sord PE=1 SV=3

 Score =  302 bits (774), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 151/349 (43%), Positives = 230/349 (65%), Gaps = 5/349 (1%)

Query: 12  KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKP 71
           K +N++  + G   ++++ Y +P LGP DV +++ ++GICGSDVH+++  R  +F+VKKP
Sbjct: 6   KGENLSLVVHGPGDIRLENYPIPELGPNDVLLKMHSVGICGSDVHYWEHGRIGDFVVKKP 65

Query: 72  MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT 131
           MV+GHE AG + +VG  VK L+ GDRVA+EPG+       CK G YNL P + F  +PP 
Sbjct: 66  MVLGHEAAGTVTKVGELVKHLKPGDRVAIEPGVPREVDEYCKIGRYNLTPTIFFCATPPD 125

Query: 132 NGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIG 191
           +G+L     H A  CYKLPD+V+ EEGA+ EPLSVG++ACRR +V     V++ G+GP+G
Sbjct: 126 DGNLCRFYKHNADFCYKLPDSVTFEEGALIEPLSVGIYACRRGSVSLGNKVLVCGAGPVG 185

Query: 192 LVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG 251
           +VTLL A+A GA ++++TD+   RL+ A+ +GAD T +V    E       K+++ +GS 
Sbjct: 186 MVTLLVAKAMGAAQVVVTDLSASRLTKAKEVGADFTIQVGK--ETPQEIASKVESLLGSK 243

Query: 252 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRST 311
            +V+ +C G + ++ T + AT  GG + ++G+    + + L  AA REVD+ G+FRY +T
Sbjct: 244 PEVTIECTGAESSVQTGIYATHSGGTLVIVGMGAEMVNLPLVHAAIREVDIKGVFRYCNT 303

Query: 312 WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 360
           WP+ I  L S  ++VKPL+THRF   +K +E AFE +A+ G  +KVM  
Sbjct: 304 WPMAISMLASKTLNVKPLVTHRFPL-EKAVE-AFE-TAKKGVGLKVMIK 349

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|P27867|DHSO_RAT Sorbitol dehydrogenase OS=Rattus norvegicus GN=Sord PE=1 SV=4

 Score =  302 bits (773), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 150/350 (42%), Positives = 233/350 (66%), Gaps = 7/350 (2%)

Query: 12  KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKP 71
           K +N++  + G   ++++ Y +P LGP DV +++ ++GICGSDVH+++  R  +F+VKKP
Sbjct: 6   KGENLSLVVHGPGDIRLENYPIPELGPNDVLLKMHSVGICGSDVHYWEHGRIGDFVVKKP 65

Query: 72  MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT 131
           MV+GHE AG + +VG  VK L+ GDRVA+EPG+       CK G YNL P + F  +PP 
Sbjct: 66  MVLGHEAAGTVTKVGPMVKHLKPGDRVAIEPGVPREIDEFCKIGRYNLTPSIFFCATPPD 125

Query: 132 NGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIG 191
           +G+L     H A  CYKLPD+V+ EEGA+ EPLSVG++ACRR +V     V++ G+GPIG
Sbjct: 126 DGNLCRFYKHSADFCYKLPDSVTFEEGALIEPLSVGIYACRRGSVSLGNKVLVCGAGPIG 185

Query: 192 LVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVG-KIQNAMGS 250
           +VTLL A+A GA ++++ D+   RL+ A+ +GAD T +V+   ++   D+  K+++ +GS
Sbjct: 186 IVTLLVAKAMGASQVVVIDLSASRLAKAKEVGADFTIQVA---KETPHDIAKKVESVLGS 242

Query: 251 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRS 310
             +V+ +C G + ++ T + AT  GG + ++G+    + + L  AA REVD+ G+FRY +
Sbjct: 243 KPEVTIECTGAESSVQTGIYATHSGGTLVVVGMGPEMINLPLVHAAVREVDIKGVFRYCN 302

Query: 311 TWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 360
           TWP+ +  L S  ++VKPL+THRF   +K +E AFE +A+ G  +KVM  
Sbjct: 303 TWPMAVSMLASKTLNVKPLVTHRFPL-EKAVE-AFE-TAKKGLGLKVMIK 349

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|P07846|DHSO_SHEEP Sorbitol dehydrogenase OS=Ovis aries GN=SORD PE=1 SV=1

 Score =  300 bits (769), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 154/346 (44%), Positives = 226/346 (65%), Gaps = 6/346 (1%)

Query: 14  QNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMV 73
           +N++  + G   L+++ Y +P  GP +V +++ ++GICGSDVH+++  R  +F+VKKPMV
Sbjct: 6   ENLSLVVHGPGDLRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQG-RIGDFVVKKPMV 64

Query: 74  IGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNG 133
           +GHE +G + +VGS V+ L+ GDRVA++PG        CK G YNL P + F  +PP +G
Sbjct: 65  LGHEASGTVVKVGSLVRHLQPGDRVAIQPGAPRQTDEFCKIGRYNLSPTIFFCATPPDDG 124

Query: 134 SLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLV 193
           +L     H A  CYKLPDNV+ EEGA+ EPLSVG+HACRRA V     V++ G+GPIGLV
Sbjct: 125 NLCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCGAGPIGLV 184

Query: 194 TLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGID 253
            LLAA+A GA ++++TD+   RLS A+ +GAD   ++S   E  +    K++  +GS  +
Sbjct: 185 NLLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILEISN--ESPEEIAKKVEGLLGSKPE 242

Query: 254 VSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWP 313
           V+ +C G + ++   + AT  GG + L+GL     +V L  AA REVD+ G+FRY +TWP
Sbjct: 243 VTIECTGVETSIQAGIYATHSGGTLVLVGLGSEMTSVPLVHAATREVDIKGVFRYCNTWP 302

Query: 314 LCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 359
           + I  L S  ++VKPL+THRF   +K +E AFE S + G  +KVM 
Sbjct: 303 MAISMLASKSVNVKPLVTHRFPL-EKALE-AFETSKK-GLGLKVMI 345

Converts sorbitol to fructose. Part of the polyol pathway that plays an important role in sperm physiology. May play a role in the sperm motility by providing an energetic source for sperm.

Ovis aries (taxid: 9940)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 4

>sp|A1CFY8|XYL2_ASPCL Probable D-xylulose reductase A OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=xdhA PE=3 SV=2

 Score =  273 bits (697), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 147/350 (42%), Positives = 212/350 (60%), Gaps = 11/350 (3%)

Query: 14  QNMAAWLLGIKTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPM 72
           QN++  L GI  +K +   +P L  P DV V +K  GICGSDVH+++     +F+VK PM
Sbjct: 9   QNLSFVLEGIHQVKFEDRPIPELRDPHDVIVNVKYTGICGSDVHYWEHGAIGHFVVKDPM 68

Query: 73  VIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTN 132
           V+GHE +G++ +VGS V SL+VGDRVA+EPG+ C  C  CKAG YNLC +M F  +PP +
Sbjct: 69  VLGHESSGVVAKVGSAVTSLKVGDRVAMEPGVPCRRCEPCKAGKYNLCEKMAFAATPPYD 128

Query: 133 GSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGL 192
           G+LA     P   CYKLP+N+SL+EGA+ EPL V VH  R+A++ P  +V++ G+GP+GL
Sbjct: 129 GTLAKYYPLPEDFCYKLPENISLQEGALMEPLGVAVHITRQASIKPGESVVVFGAGPVGL 188

Query: 193 VTLLAARAFGAPRIIITDVDVQRLSIARNLGAD---ETAKVSTDIEDVDTDVGKIQNAMG 249
           +    ARAFGA +II  D+   RL  A+   A    E AKVS      + D  + +N +G
Sbjct: 189 LCCAVARAFGASKIIAVDIQKTRLDFAKKYAATAIFEPAKVSA---VANADQMREENDLG 245

Query: 250 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYR 309
            G DV  D  G + ++ T ++  RPGG     G+ + E+   +  A  +E+ + G FRY 
Sbjct: 246 PGADVVIDASGAEPSVHTGIHVLRPGGTYVQGGMGRNEINFPIMAACTKELTIKGSFRYG 305

Query: 310 S-TWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 358
           S  + L ++ + SGK++VK LIT    F  +E E AF+   + G  IK +
Sbjct: 306 SGDYKLAVDLVASGKVNVKDLITGVVEF--QEAEQAFK-EVKAGKGIKTL 352

Xylitol dehydrogenase which catalyzes the conversion of xylitol to D-xylulose. Xylose is a major component of hemicelluloses such as xylan. Most fungi utilize D-xylose via three enzymatic reactions, xylose reductase (XR), xylitol dehydrogenase (XDH), and xylulokinase, to form xylulose 5-phosphate, which enters pentose phosphate pathway.

Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) (taxid: 344612)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 9

>sp|Q5ARL6|XYL2_EMENI Probable D-xylulose reductase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=xdhA PE=3 SV=1

 Score =  271 bits (692), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 144/347 (41%), Positives = 207/347 (59%), Gaps = 5/347 (1%)

Query: 14  QNMAAWLLGIKTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPM 72
           QN++  L GI  +K +   +P L  P DV V +K  GICGSDVH++       F+VK+PM
Sbjct: 9   QNLSFVLEGIHRVKFEDRPIPKLKSPHDVIVNVKYTGICGSDVHYWDHGAIGQFVVKEPM 68

Query: 73  VIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTN 132
           V+GHE +GI+ ++GS V SL+VGD VA+EPGI C  C  CKAG YNLC +M F  +PP +
Sbjct: 69  VLGHESSGIVTQIGSAVTSLKVGDHVAMEPGIPCRRCEPCKAGKYNLCEKMAFAATPPYD 128

Query: 133 GSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGL 192
           G+LA     P   CYKLP+++SL EGA+ EPL V VH  R+ANV P   V++ G+GP+GL
Sbjct: 129 GTLAKYYTLPEDFCYKLPESISLPEGALMEPLGVAVHIVRQANVTPGQTVVVFGAGPVGL 188

Query: 193 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI 252
           +    A+AFGA RII  D+   RL  A+   A  T + S      +      +N +G G 
Sbjct: 189 LCCAVAKAFGAIRIIAVDIQKPRLDFAKKFAATATFEPSKAPATENATRMIAENDLGRGA 248

Query: 253 DVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRS-T 311
           DV+ D  G + ++ T ++  RPGG     G+ ++EM   +  A  +E+++ G FRY S  
Sbjct: 249 DVAIDASGVEPSVHTGIHVLRPGGTYVQGGMGRSEMNFPIMAACTKELNIKGSFRYGSGD 308

Query: 312 WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 358
           + L ++ + SG+I+VK LIT    F  ++ E AF+   + G  IK +
Sbjct: 309 YKLAVQLVASGQINVKELITGIVKF--EDAEQAFK-DVKTGKGIKTL 352

Xylitol dehydrogenase which catalyzes the conversion of xylitol to D-xylulose. Xylose is a major component of hemicelluloses such as xylan. Most fungi utilize D-xylose via three enzymatic reactions, xylose reductase (XR), xylitol dehydrogenase (XDH), and xylulokinase, to form xylulose 5-phosphate, which enters pentose phosphate pathway.

Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (taxid: 227321)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	361
224122460	359	predicted protein [Populus trichocarpa]	0.961	0.966	0.844	1e-174
225469314	366	PREDICTED: L-idonate 5-dehydrogenase [Vi	0.963	0.950	0.821	1e-173
359490368	366	PREDICTED: L-idonate 5-dehydrogenase-lik	0.963	0.950	0.821	1e-173
297741126	346	unnamed protein product [Vitis vinifera]	0.958	1.0	0.823	1e-172
297741127	346	unnamed protein product [Vitis vinifera]	0.958	1.0	0.823	1e-172
147767778	368	hypothetical protein VITISV_028585 [Viti	0.963	0.945	0.814	1e-171
350538545	355	sorbitol related enzyme [Solanum lycoper	0.977	0.994	0.764	1e-164
224120122	364	predicted protein [Populus trichocarpa]	0.969	0.961	0.771	1e-164
356559880	364	PREDICTED: L-idonate 5-dehydrogenase-lik	0.983	0.975	0.755	1e-163
358345351	362	L-idonate 5-dehydrogenase [Medicago trun	0.980	0.977	0.734	1e-162

>gi|224122460|ref|XP_002318842.1| predicted protein [Populus trichocarpa] gi|222859515|gb|EEE97062.1| predicted protein [Populus trichocarpa]

 Score =  617 bits (1590), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 293/347 (84%), Positives = 323/347 (93%)

Query: 15  NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVI 74
           N AAWLLGIKTLKIQPYHLP LGP DVKVRIKALGICGSDVHHFKTMRCA+F+VKKPMVI
Sbjct: 13  NKAAWLLGIKTLKIQPYHLPPLGPLDVKVRIKALGICGSDVHHFKTMRCASFVVKKPMVI 72

Query: 75  GHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGS 134
           GHECAGIIE+VGSEVKSL VGDRVALEPGISC  C+LCK G YNLCPEM+FFGSPPTNGS
Sbjct: 73  GHECAGIIEDVGSEVKSLAVGDRVALEPGISCRRCNLCKEGRYNLCPEMKFFGSPPTNGS 132

Query: 135 LAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVT 194
           LA+KVVHPA LC+KLPDNVSLEEGAMCEPLSVGVHACRRA +GPETNV+IMG+GPIGL+T
Sbjct: 133 LANKVVHPANLCFKLPDNVSLEEGAMCEPLSVGVHACRRAQIGPETNVLIMGAGPIGLIT 192

Query: 195 LLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV 254
           LLA+RAFGAPR++I DVD +RLSIA+NLGADE   VST+I+DVD +V KIQNAMGSGIDV
Sbjct: 193 LLASRAFGAPRVVIVDVDDRRLSIAKNLGADEIIHVSTNIQDVDEEVIKIQNAMGSGIDV 252

Query: 255 SFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPL 314
           SFDCVG++KTM+TALNAT+ GGKVCLIGLA TEMTV LTP+AAREVDVIGIFRYR+TWPL
Sbjct: 253 SFDCVGYNKTMTTALNATQSGGKVCLIGLALTEMTVPLTPSAAREVDVIGIFRYRNTWPL 312

Query: 315 CIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361
           CIEFL++GKIDVKPLITHRF F+Q+E+E AFE SA GGNAIKVMFNL
Sbjct: 313 CIEFLKTGKIDVKPLITHRFRFSQEEVEQAFETSAGGGNAIKVMFNL 359

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225469314|ref|XP_002269936.1| PREDICTED: L-idonate 5-dehydrogenase [Vitis vinifera] gi|229830633|sp|Q1PSI9.2|IDND_VITVI RecName: Full=L-idonate 5-dehydrogenase

 Score =  615 bits (1585), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 286/348 (82%), Positives = 326/348 (93%)

Query: 14  QNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMV 73
           +NMAAWLLGIKTLKIQPY LP+LGP DVKVRIKA+GICGSDVHHFKTMRCANFIVKKPMV
Sbjct: 19  ENMAAWLLGIKTLKIQPYILPSLGPYDVKVRIKAVGICGSDVHHFKTMRCANFIVKKPMV 78

Query: 74  IGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNG 133
           IGHECAGIIEEVGSEVK+L  GDRVALEPGISC  CSLC+ G YNLC EM+FFGSPPTNG
Sbjct: 79  IGHECAGIIEEVGSEVKNLVAGDRVALEPGISCNRCSLCRNGQYNLCREMKFFGSPPTNG 138

Query: 134 SLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLV 193
           SLA++VVHP+ LC+KLPDNVSLEEGAMCEPLSVG+HACRRANVGPETNV+IMGSGPIGLV
Sbjct: 139 SLANQVVHPSNLCFKLPDNVSLEEGAMCEPLSVGIHACRRANVGPETNVLIMGSGPIGLV 198

Query: 194 TLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGID 253
           T+LAARAFGAPRI++ DVD QRL+IA++LGAD+  +VST+I+D+D +V KIQ+ M +G+D
Sbjct: 199 TMLAARAFGAPRIVLVDVDDQRLAIAKDLGADDIIRVSTNIQDLDEEVAKIQSTMVTGVD 258

Query: 254 VSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWP 313
           VSFDCVGF+KTMSTALNATR GGKVCL+GLA++EMTV LTPAAAREVD++GIFRYR+TWP
Sbjct: 259 VSFDCVGFNKTMSTALNATRAGGKVCLVGLAQSEMTVPLTPAAAREVDIVGIFRYRNTWP 318

Query: 314 LCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361
           LC+EFLRSGKIDVKPLITHRF F+QK++E+AFE SA+GGNAIKVMFNL
Sbjct: 319 LCLEFLRSGKIDVKPLITHRFTFSQKDVEEAFETSARGGNAIKVMFNL 366

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359490368|ref|XP_002267662.2| PREDICTED: L-idonate 5-dehydrogenase-like [Vitis vinifera] gi|74273318|gb|ABA01327.1| L-idonate dehydrogenase [Vitis vinifera]

 Score =  614 bits (1584), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 286/348 (82%), Positives = 326/348 (93%)

Query: 14  QNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMV 73
           +NMAAWLLGIKTLKIQPY LP+LGP DVKVRIKA+GICGSDVHHFKTMRCANFIVKKPMV
Sbjct: 19  ENMAAWLLGIKTLKIQPYILPSLGPHDVKVRIKAVGICGSDVHHFKTMRCANFIVKKPMV 78

Query: 74  IGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNG 133
           IGHECAGIIEEVGSEVK+L VGDRVALEPGISC  CSLC+ G YNLC EM+FFGSPPTNG
Sbjct: 79  IGHECAGIIEEVGSEVKNLVVGDRVALEPGISCNRCSLCRNGQYNLCREMKFFGSPPTNG 138

Query: 134 SLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLV 193
           SLA++VVHP+ LC+KLPDNVSLEEGAMCEPLSVG+HACRRANVGPETNV+IMGSGPIGLV
Sbjct: 139 SLANQVVHPSNLCFKLPDNVSLEEGAMCEPLSVGIHACRRANVGPETNVLIMGSGPIGLV 198

Query: 194 TLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGID 253
           T+LAARAFGAPRI++ DVD QRL+IA++LGAD+  +VST+I+D+D +V KIQ+ M +G+D
Sbjct: 199 TMLAARAFGAPRIVLVDVDDQRLAIAKDLGADDIIRVSTNIQDLDEEVAKIQSTMVTGVD 258

Query: 254 VSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWP 313
           VS DCVGF+KTMSTALNATR GGKVCL+GLA++EMTV LTPAAAREVD++GIFRYR+TWP
Sbjct: 259 VSLDCVGFNKTMSTALNATRAGGKVCLVGLAQSEMTVPLTPAAAREVDIVGIFRYRNTWP 318

Query: 314 LCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361
           LC+EFLRSGKIDVKPLITHRF F+QK++E+AFE SA+GGNAIKVMFNL
Sbjct: 319 LCLEFLRSGKIDVKPLITHRFTFSQKDVEEAFETSARGGNAIKVMFNL 366

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297741126|emb|CBI31857.3| unnamed protein product [Vitis vinifera]

 Score =  612 bits (1577), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 285/346 (82%), Positives = 324/346 (93%)

Query: 16  MAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIG 75
           MAAWLLGIKTLKIQPY LP+LGP DVKVRIKA+GICGSDVHHFKTMRCANFIVKKPMVIG
Sbjct: 1   MAAWLLGIKTLKIQPYILPSLGPHDVKVRIKAVGICGSDVHHFKTMRCANFIVKKPMVIG 60

Query: 76  HECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSL 135
           HECAGIIEEVGSEVK+L VGDRVALEPGISC  CSLC+ G YNLC EM+FFGSPPTNGSL
Sbjct: 61  HECAGIIEEVGSEVKNLVVGDRVALEPGISCNRCSLCRNGQYNLCREMKFFGSPPTNGSL 120

Query: 136 AHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTL 195
           A++VVHP+ LC+KLPDNVSLEEGAMCEPLSVG+HACRRANVGPETNV+IMGSGPIGLVT+
Sbjct: 121 ANQVVHPSNLCFKLPDNVSLEEGAMCEPLSVGIHACRRANVGPETNVLIMGSGPIGLVTM 180

Query: 196 LAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 255
           LAARAFGAPRI++ DVD QRL+IA++LGAD+  +VST+I+D+D +V KIQ+ M +G+DVS
Sbjct: 181 LAARAFGAPRIVLVDVDDQRLAIAKDLGADDIIRVSTNIQDLDEEVAKIQSTMVTGVDVS 240

Query: 256 FDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLC 315
            DCVGF+KTMSTALNATR GGKVCL+GLA++EMTV LTPAAAREVD++GIFRYR+TWPLC
Sbjct: 241 LDCVGFNKTMSTALNATRAGGKVCLVGLAQSEMTVPLTPAAAREVDIVGIFRYRNTWPLC 300

Query: 316 IEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361
           +EFLRSGKIDVKPLITHRF F+QK++E+AFE SA+GGNAIKVMFNL
Sbjct: 301 LEFLRSGKIDVKPLITHRFTFSQKDVEEAFETSARGGNAIKVMFNL 346

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297741127|emb|CBI31858.3| unnamed protein product [Vitis vinifera]

 Score =  612 bits (1577), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 285/346 (82%), Positives = 324/346 (93%)

Query: 16  MAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIG 75
           MAAWLLGIKTLKIQPY LP+LGP DVKVRIKA+GICGSDVHHFKTMRCANFIVKKPMVIG
Sbjct: 1   MAAWLLGIKTLKIQPYILPSLGPYDVKVRIKAVGICGSDVHHFKTMRCANFIVKKPMVIG 60

Query: 76  HECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSL 135
           HECAGIIEEVGSEVK+L  GDRVALEPGISC  CSLC+ G YNLC EM+FFGSPPTNGSL
Sbjct: 61  HECAGIIEEVGSEVKNLVAGDRVALEPGISCNRCSLCRNGQYNLCREMKFFGSPPTNGSL 120

Query: 136 AHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTL 195
           A++VVHP+ LC+KLPDNVSLEEGAMCEPLSVG+HACRRANVGPETNV+IMGSGPIGLVT+
Sbjct: 121 ANQVVHPSNLCFKLPDNVSLEEGAMCEPLSVGIHACRRANVGPETNVLIMGSGPIGLVTM 180

Query: 196 LAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 255
           LAARAFGAPRI++ DVD QRL+IA++LGAD+  +VST+I+D+D +V KIQ+ M +G+DVS
Sbjct: 181 LAARAFGAPRIVLVDVDDQRLAIAKDLGADDIIRVSTNIQDLDEEVAKIQSTMVTGVDVS 240

Query: 256 FDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLC 315
           FDCVGF+KTMSTALNATR GGKVCL+GLA++EMTV LTPAAAREVD++GIFRYR+TWPLC
Sbjct: 241 FDCVGFNKTMSTALNATRAGGKVCLVGLAQSEMTVPLTPAAAREVDIVGIFRYRNTWPLC 300

Query: 316 IEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361
           +EFLRSGKIDVKPLITHRF F+QK++E+AFE SA+GGNAIKVMFNL
Sbjct: 301 LEFLRSGKIDVKPLITHRFTFSQKDVEEAFETSARGGNAIKVMFNL 346

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147767778|emb|CAN73609.1| hypothetical protein VITISV_028585 [Vitis vinifera]

 Score =  606 bits (1563), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 285/350 (81%), Positives = 325/350 (92%), Gaps = 2/350 (0%)

Query: 14  QNMAAWLLGIKTLKIQPYHLPTLG--PQDVKVRIKALGICGSDVHHFKTMRCANFIVKKP 71
           +NMAAWLLGIKTLKIQPY LP+LG  P DVKV IKA+GICGSDVHHFKTMRCANFIVKKP
Sbjct: 19  ENMAAWLLGIKTLKIQPYILPSLGIIPYDVKVXIKAVGICGSDVHHFKTMRCANFIVKKP 78

Query: 72  MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT 131
           MVIGHECAGIIEEVGSEVK+L  GDRVALEPGISC  CSLC+ G YNLC EM+FFGSPPT
Sbjct: 79  MVIGHECAGIIEEVGSEVKNLVXGDRVALEPGISCNRCSLCRNGQYNLCREMKFFGSPPT 138

Query: 132 NGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIG 191
           NGSLA++VVHP+ LC+KLPDNVSLEEGAMCEPLSVG+HACRRANVGPETNV+IMGSGPIG
Sbjct: 139 NGSLANQVVHPSNLCFKLPDNVSLEEGAMCEPLSVGIHACRRANVGPETNVLIMGSGPIG 198

Query: 192 LVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG 251
           LVT+LAARAFGAPRI++ DVD QRL+IA++LGAD+  +VST+I+D+D +V KIQ+ M +G
Sbjct: 199 LVTMLAARAFGAPRIVLVDVDDQRLAIAKDLGADDIIRVSTNIQDLDEEVAKIQSTMVTG 258

Query: 252 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRST 311
           +DVSFDCVGF+KTMSTALNATR GGKVCL+GLA++EMTV LTPAAAREVD++GIFRYR+T
Sbjct: 259 VDVSFDCVGFNKTMSTALNATRAGGKVCLVGLAQSEMTVPLTPAAAREVDIVGIFRYRNT 318

Query: 312 WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361
           WPLC+EFLRSGKIDVKPLITHRF F+QK++E+AFE SA+GGNAIKVMFNL
Sbjct: 319 WPLCLEFLRSGKIDVKPLITHRFTFSQKDVEEAFETSARGGNAIKVMFNL 368

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|350538545|ref|NP_001234092.1| sorbitol related enzyme [Solanum lycopersicum] gi|78183416|dbj|BAE47038.1| sorbitol related enzyme [Solanum lycopersicum]

 Score =  583 bits (1504), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 270/353 (76%), Positives = 317/353 (89%)

Query: 9   EGDKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIV 68
           +G  ++NMAAWLLG+ TLKIQP++LP LGP DV+VR+KA+GICGSDVH+ KTMRCA+F+V
Sbjct: 3   KGGSDENMAAWLLGVNTLKIQPFNLPALGPHDVRVRMKAVGICGSDVHYLKTMRCADFVV 62

Query: 69  KKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS 128
           K+PMVIGHECAGIIEEVG EVK+L  GDRVALEPGISC  C+LCK G YNLCPEM+FF +
Sbjct: 63  KEPMVIGHECAGIIEEVGGEVKTLVPGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFAT 122

Query: 129 PPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSG 188
           PP +GSLA++VVHPA LC+KLPD++SLEEGAMCEPLSVGVHACRRANVGPETN++++G+G
Sbjct: 123 PPVHGSLANQVVHPADLCFKLPDDISLEEGAMCEPLSVGVHACRRANVGPETNILVLGAG 182

Query: 189 PIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM 248
           PIGLVTLLAARAFGAPRI+I DVD  RLS+A+ LGAD+  KVS +I+DV TD+  IQ AM
Sbjct: 183 PIGLVTLLAARAFGAPRIVIVDVDDYRLSVAKKLGADDIVKVSINIQDVATDIENIQKAM 242

Query: 249 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY 308
           G GID SFDC GF+KTMSTAL ATRPGGKVCL+G+   EMTV LTPAAAREVDVIGIFRY
Sbjct: 243 GGGIDASFDCAGFNKTMSTALGATRPGGKVCLVGMGHHEMTVPLTPAAAREVDVIGIFRY 302

Query: 309 RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361
           ++TWPLC+EFLRSGKIDVKPLITHRFGF+Q+E+E+AFE SA+GG+AIKVMFNL
Sbjct: 303 KNTWPLCLEFLRSGKIDVKPLITHRFGFSQEEVEEAFETSARGGDAIKVMFNL 355

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224120122|ref|XP_002318247.1| predicted protein [Populus trichocarpa] gi|222858920|gb|EEE96467.1| predicted protein [Populus trichocarpa]

 Score =  582 bits (1501), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 270/350 (77%), Positives = 314/350 (89%)

Query: 12  KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKP 71
           + +NMAAWLLG+ TLKIQP+ LP LGP DV+VR+KA+GICGSDVH+ KTM+CA+F+VK+P
Sbjct: 15  EEENMAAWLLGVNTLKIQPFKLPCLGPHDVRVRMKAVGICGSDVHYLKTMKCAHFVVKEP 74

Query: 72  MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT 131
           MVIGHECAGIIEEVGSE+KSL  GDRVALEPGISC  C LCK G YNLCP+M+FF +PP 
Sbjct: 75  MVIGHECAGIIEEVGSEIKSLVPGDRVALEPGISCWRCYLCKEGRYNLCPDMKFFATPPV 134

Query: 132 NGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIG 191
           +GSLA++VVHPA LC+KLPDNVSLEEGAMCEPLSVGVHACRRAN+GPETNV++MG+GPIG
Sbjct: 135 HGSLANQVVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLVMGAGPIG 194

Query: 192 LVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG 251
           LVTLLAARAFGAPRI+I DVD  RLS+A++LGADE  KVST+++DVD +V  I  AMG+G
Sbjct: 195 LVTLLAARAFGAPRIVIVDVDDYRLSVAKDLGADEIVKVSTNLQDVDQEVVLIHQAMGTG 254

Query: 252 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRST 311
           +DV+FDC GF+KTMSTAL+ATRPGGKVCLIG+   EMTV LTPAAAREVDVIG+FRY++T
Sbjct: 255 VDVTFDCAGFNKTMSTALSATRPGGKVCLIGMGHNEMTVPLTPAAAREVDVIGVFRYKNT 314

Query: 312 WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361
           WPLCIEFL SGKIDVKPLITHRFGF+QKE+E+AFE SA G  AIKVMFNL
Sbjct: 315 WPLCIEFLSSGKIDVKPLITHRFGFSQKEVEEAFETSASGSTAIKVMFNL 364

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356559880|ref|XP_003548224.1| PREDICTED: L-idonate 5-dehydrogenase-like [Glycine max]

 Score =  581 bits (1498), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 269/356 (75%), Positives = 322/356 (90%), Gaps = 1/356 (0%)

Query: 7   DDEGD-KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCAN 65
           D+ G+ K +NMAAWL+G+ TLKIQP+ LPTLGP DV+VR+KA+GICGSDVH+ KT+RCA+
Sbjct: 9   DEHGEGKEENMAAWLVGMNTLKIQPFKLPTLGPHDVRVRMKAVGICGSDVHYLKTLRCAH 68

Query: 66  FIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRF 125
           FIVK+PMVIGHECAGIIEEVGS+VKSL  GDRVA+EPGISC HC+ CK G YNLC +M+F
Sbjct: 69  FIVKEPMVIGHECAGIIEEVGSQVKSLVPGDRVAIEPGISCWHCNHCKHGRYNLCDDMKF 128

Query: 126 FGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIM 185
           F +PP +GSLA+++VHPA LC+KLPDNVSLEEGAMCEPLSVGVHACRRAN+GPETNV+IM
Sbjct: 129 FATPPVHGSLANQIVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIM 188

Query: 186 GSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ 245
           G+GPIGLVT+LAARAFGAP+ +I DVD  RLS+A++LGAD+  KVST+I+DV  +V +IQ
Sbjct: 189 GAGPIGLVTMLAARAFGAPKTVIVDVDDHRLSVAKSLGADDIIKVSTNIKDVAEEVVQIQ 248

Query: 246 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGI 305
             MG+GIDV+FDC GFDKTMSTAL+AT+PGGKVCL+G+  +EMTV LTPAAAREVDV+G+
Sbjct: 249 KVMGAGIDVTFDCAGFDKTMSTALSATQPGGKVCLVGMGHSEMTVPLTPAAAREVDVVGV 308

Query: 306 FRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361
           FRY +TWPLC+EFLRSGKIDVKPLITHRFGF+QKE+E+AFE SA+GGNAIKVMFNL
Sbjct: 309 FRYMNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFNL 364

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358345351|ref|XP_003636744.1| L-idonate 5-dehydrogenase [Medicago truncatula] gi|355502679|gb|AES83882.1| L-idonate 5-dehydrogenase [Medicago truncatula]

 Score =  577 bits (1486), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 260/354 (73%), Positives = 321/354 (90%)

Query: 8   DEGDKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFI 67
           D+  + QNMAAWL+G+ TLKIQP++LP+LGP DV++++KA+GICGSDVH+ KT+RCA+FI
Sbjct: 9   DDDVEQQNMAAWLVGLNTLKIQPFNLPSLGPHDVRIKMKAVGICGSDVHYLKTLRCADFI 68

Query: 68  VKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFG 127
           VK+PMVIGHECAGIIEEVGS+VK+L  GDRVA+EPGISC  C  CK G YNLCP+M+FF 
Sbjct: 69  VKEPMVIGHECAGIIEEVGSQVKTLVPGDRVAIEPGISCWRCDHCKLGRYNLCPDMKFFA 128

Query: 128 SPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGS 187
           +PP +GSLA+++VHPA LC+KLP+NVSLEEGAMCEPLSVGVHACRRAN+GPETNV+IMG+
Sbjct: 129 TPPVHGSLANQIVHPADLCFKLPENVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGA 188

Query: 188 GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA 247
           GPIGLVT+L+ARAFGAPRI++ DVD  RLS+A++LGAD+  KVST+I+DV  +V +I N 
Sbjct: 189 GPIGLVTMLSARAFGAPRIVVVDVDDHRLSVAKSLGADDIVKVSTNIQDVAEEVKQIHNV 248

Query: 248 MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFR 307
           +G+G+DV+FDC GF+KTM+TAL AT+PGGKVCL+G+  +EMTV LTPAAAREVDV+GIFR
Sbjct: 249 LGAGVDVTFDCAGFNKTMTTALTATQPGGKVCLVGMGHSEMTVPLTPAAAREVDVVGIFR 308

Query: 308 YRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361
           Y++TWPLC+EFLRSGKIDVKPLITHRFGF+QKE+E+AFE SA+GGNAIKVMFNL
Sbjct: 309 YKNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFNL 362

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	361
TAIR|locus:2173093	364	AT5G51970 [Arabidopsis thalian	0.977	0.969	0.746	1.9e-147
FB|FBgn0022359	360	Sodh-2 "Sorbitol dehydrogenase	0.952	0.955	0.456	2.5e-81
FB|FBgn0024289	360	Sodh-1 "Sorbitol dehydrogenase	0.952	0.955	0.459	1.4e-80
UNIPROTKB|Q4R639	357	SORD "Sorbitol dehydrogenase"	0.947	0.957	0.449	6e-80
WB|WBGene00011003	347	R04B5.5 [Caenorhabditis elegan	0.936	0.974	0.444	7.6e-80
UNIPROTKB|Q00796	357	SORD "Sorbitol dehydrogenase"	0.947	0.957	0.455	2.6e-79
UNIPROTKB|F1PXG0	356	SORD "Uncharacterized protein"	0.947	0.960	0.449	1.1e-78
UNIPROTKB|Q58D31	356	SORD "Sorbitol dehydrogenase"	0.944	0.957	0.456	1.8e-78
UNIPROTKB|Q5R5F3	357	SORD "Sorbitol dehydrogenase"	0.947	0.957	0.455	1.8e-78
MGI|MGI:98266	357	Sord "sorbitol dehydrogenase"	0.947	0.957	0.435	4.8e-78

TAIR|locus:2173093 AT5G51970 [Arabidopsis thaliana (taxid:3702)]

 Score = 1440 (512.0 bits), Expect = 1.9e-147, P = 1.9e-147
 Identities = 265/355 (74%), Positives = 313/355 (88%)

Query:     9 EGDK--NQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANF 66
             EG K   +NMAAWL+GI TLKIQP+ LP++GP DV+VR+KA+GICGSDVH+ KTMRCA+F
Sbjct:    10 EGSKVEEENMAAWLVGINTLKIQPFLLPSVGPHDVRVRMKAVGICGSDVHYLKTMRCADF 69

Query:    67 IVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF 126
             +VK+PMVIGHECAGIIEEVG EVK L VGDRVALEPGISC  C+LC+ G YNLCPEM+FF
Sbjct:    70 VVKEPMVIGHECAGIIEEVGEEVKHLVVGDRVALEPGISCWRCNLCREGRYNLCPEMKFF 129

Query:   127 GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMG 186
              +PP +GSLA++VVHPA LC+KLP+NVSLEEGAMCEPLSVGVHACRRA VGPETNV++MG
Sbjct:   130 ATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMCEPLSVGVHACRRAEVGPETNVLVMG 189

Query:   187 SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 246
             +GPIGLVT+LAARAF  PRI+I DVD  RL++A+ LGADE  +V+T++EDV ++V +IQ 
Sbjct:   190 AGPIGLVTMLAARAFSVPRIVIVDVDENRLAVAKQLGADEIVQVTTNLEDVGSEVEQIQK 249

Query:   247 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIF 306
             AMGS IDV+FDC GF+KTMSTAL ATR GGKVCL+G+    MTV LTPAAAREVDV+G+F
Sbjct:   250 AMGSNIDVTFDCAGFNKTMSTALAATRCGGKVCLVGMGHGIMTVPLTPAAAREVDVVGVF 309

Query:   307 RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361
             RY++TWPLC+EFL SGKIDVKPLITHRFGF+QKE+EDAFE SA+G NAIKVMFNL
Sbjct:   310 RYKNTWPLCLEFLTSGKIDVKPLITHRFGFSQKEVEDAFETSARGSNAIKVMFNL 364

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

FB|FBgn0022359 Sodh-2 "Sorbitol dehydrogenase-2" [Drosophila melanogaster (taxid:7227)]

 Score = 816 (292.3 bits), Expect = 2.5e-81, P = 2.5e-81
 Identities = 159/348 (45%), Positives = 230/348 (66%)

Query:    15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVI 74
             N+ A L GI+ L+++   +P +   +V + + ++GICGSDVH+    R  +F++ KPM+I
Sbjct:     5 NLTAVLHGIEDLRLEQRPIPEIADDEVLLAMDSVGICGSDVHYLAHGRIGDFVLTKPMII 64

Query:    75 GHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGS 134
             GHE AG++ ++G +V +L+VGDRVA+EPG+ C +C  CK G YNLC +M F  +PP +G+
Sbjct:    65 GHEAAGVVAKLGKKVTTLKVGDRVAIEPGVPCRYCDHCKQGRYNLCADMVFCATPPYDGN 124

Query:   135 LAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVT 194
             L     H A  C+KLPD+VS+EEGA+ EPLSVGVHACRRA VG  + V+I+G+GPIGLVT
Sbjct:   125 LTRYYKHAADFCFKLPDHVSMEEGALLEPLSVGVHACRRAGVGLGSKVLILGAGPIGLVT 184

Query:   195 LLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV 254
             LLAA+A GA  I+ITD+  QRL +A+ LGA  T  +  D +  +  V  +   M    D 
Sbjct:   185 LLAAQAMGASEILITDLVQQRLDVAKELGATHTLLLQRD-QSAEETVKVVHQTMSEVPDK 243

Query:   255 SFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPL 314
             S DC G + +   A+ ATR GG V ++G+   E+ + L  A ARE+D+ G+FRY + +  
Sbjct:   244 SIDCCGAESSARLAIFATRSGGVVVVVGMGAPEVKLPLINALAREIDIRGVFRYCNDYSA 303

Query:   315 CIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG-GNAIKVMFNL 361
              +  + SGK++VK L+TH +  T  E  +AFE S +G G AIKVM ++
Sbjct:   304 ALALVASGKVNVKRLVTHHYDIT--ETAEAFETSRRGTGGAIKVMIHV 349

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=ISS;TAS

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

FB|FBgn0024289 Sodh-1 "Sorbitol dehydrogenase 1" [Drosophila melanogaster (taxid:7227)]

 Score = 809 (289.8 bits), Expect = 1.4e-80, P = 1.4e-80
 Identities = 160/348 (45%), Positives = 229/348 (65%)

Query:    15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVI 74
             N+ A L GI+ ++++   +P +   +V + + ++GICGSDVH+    R  +F++ KPM+I
Sbjct:     5 NLTAVLHGIEDMRLEQRPIPEIADDEVLLAMDSVGICGSDVHYLAHGRIGDFVLTKPMII 64

Query:    75 GHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGS 134
             GHE AG++ ++G +V +L+VGDRVA+EPG+ C  C  CK G YNLCP M F  +PP +G+
Sbjct:    65 GHESAGVVAKLGKKVTTLKVGDRVAIEPGVPCRKCDHCKQGKYNLCPGMVFCATPPYDGN 124

Query:   135 LAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVT 194
             L     H A  C+KLPD+V++EEGA+ EPLSVGVHAC+RA V   + V+I+G+GPIGLVT
Sbjct:   125 LTRYYKHAADFCFKLPDHVTMEEGALLEPLSVGVHACKRAEVTLGSKVLILGAGPIGLVT 184

Query:   195 LLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV 254
             L+AA+A GA  I+ITD+  QRL +A+ LGA  T  +  D    +T V  +Q  MG   D 
Sbjct:   185 LMAAQAMGASEILITDLVQQRLDVAKELGATHTLLLKRDQTAEETAV-LVQKTMGGQPDK 243

Query:   255 SFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPL 314
             S DC G + +   A+ ATR GG V ++G+   E+ + L  A AREVD+ G+FRY + +  
Sbjct:   244 SIDCCGAESSARLAIFATRSGGIVVVVGMGAAEIKLPLINALAREVDIRGVFRYCNDYAA 303

Query:   315 CIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG-GNAIKVMFNL 361
              +  + SGK++VK L+TH F    KE   AFE S +G G AIKVM ++
Sbjct:   304 ALALVASGKVNVKRLVTHHFDI--KETAKAFETSRKGLGGAIKVMIHV 349

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=NAS

GO:0000166 "nucleotide binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

UNIPROTKB|Q4R639 SORD "Sorbitol dehydrogenase" [Macaca fascicularis (taxid:9541)]

 Score = 803 (287.7 bits), Expect = 6.0e-80, P = 6.0e-80
 Identities = 156/347 (44%), Positives = 230/347 (66%)

Query:    12 KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKP 71
             K +N++  + G   L+++ Y +P  GP +V +R+ ++GICGSDVH+++  R  NFIVKKP
Sbjct:     6 KPKNLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEEGRIGNFIVKKP 65

Query:    72 MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT 131
             MV+GHE +G +E+VGS VK L+ GDRVA+EPG+   +   CK+G YNL P + F  +PP 
Sbjct:    66 MVLGHEASGTVEKVGSLVKHLKPGDRVAIEPGVPRENDEFCKSGRYNLSPSIFFCATPPD 125

Query:   132 NGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIG 191
             +G+L     H A  CYKLPDNV+ EEGA+ EPLSVG+HACRR  V     V++ G+GPIG
Sbjct:   126 DGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHRVLVCGAGPIG 185

Query:   192 LVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG 251
             +V+LL A+A GA ++++TD+   RLS A+ +GAD   ++S   E      GK++  +G  
Sbjct:   186 VVSLLVAKAMGAAQVVVTDLSAPRLSKAKEIGADLVLQISK--ESPQEIAGKVEGLLGCK 243

Query:   252 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRST 311
              +V+ +C G + ++   + ATR GG + L+GL     T+ L  AA REVD+ G+FRY +T
Sbjct:   244 PEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTIPLLHAAVREVDIKGVFRYCNT 303

Query:   312 WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 358
             WP+ I  L S  +++KPL+THRF   +K +E AFE + + G  +K+M
Sbjct:   304 WPVAISMLASKSVNIKPLVTHRFPL-EKALE-AFE-TFKKGLGLKIM 347

GO:0030317 "sperm motility" evidence=ISS

GO:0031514 "motile cilium" evidence=ISS

WB|WBGene00011003 R04B5.5 [Caenorhabditis elegans (taxid:6239)]

 Score = 802 (287.4 bits), Expect = 7.6e-80, P = 7.6e-80
 Identities = 153/344 (44%), Positives = 228/344 (66%)

Query:    15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVI 74
             N++A L G+  L+++   +P  GP  V V++  +GICGSDVH++       F+VK+PM++
Sbjct:     5 NLSAVLYGVDDLRLEQVPIPKPGPNQVLVKVHTVGICGSDVHYWTHGAIGPFVVKEPMIV 64

Query:    75 GHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGS 134
             GHE +GI+ EVG+EVK L+VGDR+A+EPG+ C  C  CK G YNLCPEMRFF +PP +G+
Sbjct:    65 GHETSGIVSEVGNEVKHLKVGDRIAMEPGLPCKLCEHCKTGRYNLCPEMRFFATPPVHGT 124

Query:   135 LAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVT 194
             L+  VVH A  C+KLPDN+S E+GA+ EPLSV +HACRR NV     V+++G+GPIG++ 
Sbjct:   125 LSRFVVHDADFCFKLPDNLSFEDGALIEPLSVAIHACRRGNVQMGHRVLVLGAGPIGVLN 184

Query:   195 LLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI-D 253
             L+ A+A GA +++ITD+D  RL++A+ LGAD T  V    + +D    +I  A+G    D
Sbjct:   185 LITAKAVGAGKVVITDLDDGRLALAKKLGADATINVKG--KSLDAVKSEIITALGDQQPD 242

Query:   254 VSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWP 313
             V  +C G   ++ TA+  T+ GG + L+GL    + + +  +A REVD+ GIFRY + +P
Sbjct:   243 VCIECTGAQPSIETAITTTKSGGVIVLVGLGADRVEIPIIESATREVDMRGIFRYVNCYP 302

Query:   314 LCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKV 357
               IE + SGK+++  L   R  +  +E ++AF+   Q  + IKV
Sbjct:   303 TAIELISSGKLNLSGLT--RAHYKLEETQEAFK-RTQKADVIKV 343

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

UNIPROTKB|Q00796 SORD "Sorbitol dehydrogenase" [Homo sapiens (taxid:9606)]

 Score = 797 (285.6 bits), Expect = 2.6e-79, P = 2.6e-79
 Identities = 158/347 (45%), Positives = 226/347 (65%)

Query:    12 KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKP 71
             K  N++  + G   L+++ Y +P  GP +V +R+ ++GICGSDVH+++  R  NFIVKKP
Sbjct:     6 KPNNLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKP 65

Query:    72 MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT 131
             MV+GHE +G +E+VGS VK L+ GDRVA+EPG    +   CK G YNL P + F  +PP 
Sbjct:    66 MVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPD 125

Query:   132 NGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIG 191
             +G+L     H A  CYKLPDNV+ EEGA+ EPLSVG+HACRR  V     V++ G+GPIG
Sbjct:   126 DGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIG 185

Query:   192 LVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG 251
             +VTLL A+A GA ++++TD+   RLS A+ +GAD   ++S   E       K++  +G  
Sbjct:   186 MVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISK--ESPQEIARKVEGQLGCK 243

Query:   252 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRST 311
              +V+ +C G + ++   + ATR GG + L+GL     TV L  AA REVD+ G+FRY +T
Sbjct:   244 PEVTIECTGAEASIQAGIYATRSGGNLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNT 303

Query:   312 WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 358
             WP+ I  L S  ++VKPL+THRF   +K +E AFE + + G  +K+M
Sbjct:   304 WPVAISMLASKSVNVKPLVTHRFPL-EKALE-AFE-TFKKGLGLKIM 347

GO:0031966 "mitochondrial membrane" evidence=IEA

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=ISS;IDA

GO:0008270 "zinc ion binding" evidence=ISS;IDA

GO:0006006 "glucose metabolic process" evidence=TAS

GO:0006062 "sorbitol catabolic process" evidence=IDA

GO:0051287 "NAD binding" evidence=IDA

GO:0030246 "carbohydrate binding" evidence=NAS

GO:0016020 "membrane" evidence=IDA

GO:0046370 "fructose biosynthetic process" evidence=IDA

GO:0051160 "L-xylitol catabolic process" evidence=IDA

GO:0051164 "L-xylitol metabolic process" evidence=IDA

GO:0005615 "extracellular space" evidence=TAS

GO:0030317 "sperm motility" evidence=ISS;NAS

GO:0031514 "motile cilium" evidence=ISS

UNIPROTKB|F1PXG0 SORD "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 791 (283.5 bits), Expect = 1.1e-78, P = 1.1e-78
 Identities = 156/347 (44%), Positives = 227/347 (65%)

Query:    12 KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKP 71
             K +N+   + G   L+++ Y +P  GP +V +++ ++GICGSDVH+++  R  +FIVKKP
Sbjct:     5 KAENLTLVVHGPGDLRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRIGDFIVKKP 64

Query:    72 MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT 131
             MV+GHE +G + +VGS VK L+ GDRVA+EPG        CK G YNL P + F  +PP 
Sbjct:    65 MVLGHEASGTVVKVGSLVKHLKSGDRVAIEPGALREMDEFCKIGRYNLSPSIFFCATPPD 124

Query:   132 NGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIG 191
             +G+L     H A  CYKLPDNV+ EEGA+ EPLSVG+HACRRA +     V++ G+GPIG
Sbjct:   125 DGNLCQFYKHNADFCYKLPDNVTYEEGALIEPLSVGIHACRRAGITLGNKVLVCGAGPIG 184

Query:   192 LVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG 251
             LVTL+ A+A GA ++++TD+   RLS A+ +GAD   ++S   E       K+++ +G  
Sbjct:   185 LVTLIVAKAMGAGQVLVTDLSASRLSKAKEVGADIVLQISK--ESPKEIASKVEDMLGCK 242

Query:   252 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRST 311
              + + +C G +  + + + ATR GG + L+GL     TV LT A+ REVD+ G+FRY +T
Sbjct:   243 PEATIECTGVESAIQSGIYATRAGGTLVLVGLGSEMTTVPLTHASTREVDIKGVFRYCNT 302

Query:   312 WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 358
             WP+ I  L S  ++VKPL+THRF   +K +E AFE +A+ G  +KVM
Sbjct:   303 WPMAISMLASKAVNVKPLVTHRFPL-EKALE-AFE-TARKGTGLKVM 346

GO:0051287 "NAD binding" evidence=IEA

GO:0051160 "L-xylitol catabolic process" evidence=IEA

GO:0046370 "fructose biosynthetic process" evidence=IEA

GO:0030317 "sperm motility" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006062 "sorbitol catabolic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q58D31 SORD "Sorbitol dehydrogenase" [Bos taurus (taxid:9913)]

 Score = 789 (282.8 bits), Expect = 1.8e-78, P = 1.8e-78
 Identities = 159/348 (45%), Positives = 230/348 (66%)

Query:    12 KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKP 71
             K +N++  + G   L+++ Y +P  GP +V +++ ++GICGSDVH+++  R  +F+VKKP
Sbjct:     5 KPENLSLVVHGPGDLRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRIGDFVVKKP 64

Query:    72 MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT 131
             MV+GHE +G + +VGS V+ L+ GDRVA+EPG        CK G YNL P + F  +PP 
Sbjct:    65 MVLGHEASGTVVKVGSLVRHLQPGDRVAIEPGAPRETDEFCKIGRYNLSPTIFFCATPPD 124

Query:   132 NGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIG 191
             +G+L     H A  CYKLPDNV+ EEGA+ EPLSVG+HACRRA V     V++ G+GPIG
Sbjct:   125 DGNLCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCGAGPIG 184

Query:   192 LVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG 251
             LV+LLAA+A GA ++++TD+   RLS A+ +GAD   ++S   E       K++  +GS 
Sbjct:   185 LVSLLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILQISN--ESPQEIAKKVEGLLGSK 242

Query:   252 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMT-VALTPAAAREVDVIGIFRYRS 310
              +V+ +C G + ++   + AT  GG + L+GL  +EMT V L  AA REVD+ G+FRY +
Sbjct:   243 PEVTIECTGVETSIQAGIYATHSGGTLVLVGLG-SEMTSVPLVHAATREVDIKGVFRYCN 301

Query:   311 TWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 358
             TWP+ I  L S  ++VKPL+THRF   +K +E AFE S +G   +KVM
Sbjct:   302 TWPMAISMLASKSVNVKPLVTHRFPL-EKALE-AFETSKKG-LGLKVM 346

GO:0030317 "sperm motility" evidence=ISS

GO:0031514 "motile cilium" evidence=ISS

GO:0031966 "mitochondrial membrane" evidence=IEA

GO:0051287 "NAD binding" evidence=IEA

GO:0051160 "L-xylitol catabolic process" evidence=IEA

GO:0046370 "fructose biosynthetic process" evidence=IEA

GO:0006062 "sorbitol catabolic process" evidence=IEA

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q5R5F3 SORD "Sorbitol dehydrogenase" [Pongo abelii (taxid:9601)]

 Score = 789 (282.8 bits), Expect = 1.8e-78, P = 1.8e-78
 Identities = 158/347 (45%), Positives = 224/347 (64%)

Query:    12 KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKP 71
             K  N++  + G   L+++ Y +P  GP +V +R+ ++GICGSDVH+++  R  NFIVKKP
Sbjct:     6 KPSNLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEDGRIGNFIVKKP 65

Query:    72 MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT 131
             MV+GHE +G +E+VGS VK L+ GDRVA+EPG    +   CK G YNL P + F  +PP 
Sbjct:    66 MVLGHEASGTVEKVGSLVKHLKPGDRVAIEPGAPRENDEFCKIGRYNLSPSIFFCATPPD 125

Query:   132 NGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIG 191
             +G+L     H A  CYKLPDNV+ EEGAM EPLSVG+HACRR  V     V++ G+GPIG
Sbjct:   126 DGNLCRFYKHNAAFCYKLPDNVTFEEGAMIEPLSVGIHACRRGGVTLGHKVLVCGAGPIG 185

Query:   192 LVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG 251
             +VTLL A+A GA ++++TD+   RLS A+ +GAD   ++S   E       K++  +G  
Sbjct:   186 MVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISK--ESPQEIARKVEGLLGCK 243

Query:   252 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRST 311
              +V+ +C G   ++   + AT  GG + L+GL     T+ L  AA REVD+ G+FRY +T
Sbjct:   244 PEVTIECTGAGASIQAGIYATHSGGTLVLVGLGSEMTTIPLLHAAIREVDIKGVFRYCNT 303

Query:   312 WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 358
             WP+ I  L S  ++VKPLITHRF   +K +E AFE + + G  +K+M
Sbjct:   304 WPVAISMLASKSVNVKPLITHRFPL-EKALE-AFE-TFKKGLGLKIM 347

GO:0030317 "sperm motility" evidence=ISS

GO:0031514 "motile cilium" evidence=ISS

MGI|MGI:98266 Sord "sorbitol dehydrogenase" [Mus musculus (taxid:10090)]

 Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
 Identities = 151/347 (43%), Positives = 230/347 (66%)

Query:    12 KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKP 71
             K +N++  + G   ++++ Y +P LGP DV +++ ++GICGSDVH+++  R  +F+VKKP
Sbjct:     6 KGENLSLVVHGPGDIRLENYPIPELGPNDVLLKMHSVGICGSDVHYWEHGRIGDFVVKKP 65

Query:    72 MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT 131
             MV+GHE AG + +VG  VK L+ GDRVA+EPG+       CK G YNL P + F  +PP 
Sbjct:    66 MVLGHEAAGTVTKVGELVKHLKPGDRVAIEPGVPREVDEYCKIGRYNLTPTIFFCATPPD 125

Query:   132 NGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIG 191
             +G+L     H A  CYKLPD+V+ EEGA+ EPLSVG++ACRR +V     V++ G+GP+G
Sbjct:   126 DGNLCRFYKHNADFCYKLPDSVTFEEGALIEPLSVGIYACRRGSVSLGNKVLVCGAGPVG 185

Query:   192 LVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG 251
             +VTLL A+A GA ++++TD+   RL+ A+ +GAD T +V    E       K+++ +GS 
Sbjct:   186 MVTLLVAKAMGAAQVVVTDLSASRLTKAKEVGADFTIQVGK--ETPQEIASKVESLLGSK 243

Query:   252 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRST 311
              +V+ +C G + ++ T + AT  GG + ++G+    + + L  AA REVD+ G+FRY +T
Sbjct:   244 PEVTIECTGAESSVQTGIYATHSGGTLVIVGMGAEMVNLPLVHAAIREVDIKGVFRYCNT 303

Query:   312 WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 358
             WP+ I  L S  ++VKPL+THRF   +K +E AFE +A+ G  +KVM
Sbjct:   304 WPMAISMLASKTLNVKPLVTHRFPL-EKAVE-AFE-TAKKGVGLKVM 347

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003939 "L-iditol 2-dehydrogenase activity" evidence=ISO;IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0005929 "cilium" evidence=IEA

GO:0006060 "sorbitol metabolic process" evidence=IDA

GO:0006062 "sorbitol catabolic process" evidence=ISO

GO:0008270 "zinc ion binding" evidence=ISO

GO:0009725 "response to hormone stimulus" evidence=ISO

GO:0016020 "membrane" evidence=ISO

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0030317 "sperm motility" evidence=IDA

GO:0042802 "identical protein binding" evidence=ISO

GO:0042995 "cell projection" evidence=IEA

GO:0046370 "fructose biosynthetic process" evidence=ISO

GO:0046686 "response to cadmium ion" evidence=ISO

GO:0046688 "response to copper ion" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

GO:0051160 "L-xylitol catabolic process" evidence=ISO

GO:0051164 "L-xylitol metabolic process" evidence=ISO

GO:0051287 "NAD binding" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=ISO;IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
B2JYP4	TDH_YERPB	1, ., 1, ., 1, ., 1, 0, 3	0.3222	0.8753	0.9266	yes	no
A8GLC6	TDH_SERP5	1, ., 1, ., 1, ., 1, 0, 3	0.3292	0.8614	0.9120	yes	no
Q64442	DHSO_MOUSE	1, ., 1, ., 1, ., 1, 4	0.4326	0.9529	0.9635	yes	no
A2QY54	XYL2_ASPNC	1, ., 1, ., 1, ., 9	0.3976	0.9473	0.9553	yes	no
Q15ZU4	TDH_PSEA6	1, ., 1, ., 1, ., 1, 0, 3	0.3079	0.9058	0.9617	yes	no
P27867	DHSO_RAT	1, ., 1, ., 1, ., 1, 4	0.4285	0.9501	0.9607	yes	no
Q5ARL6	XYL2_EMENI	1, ., 1, ., 1, ., 9	0.4149	0.9473	0.9526	yes	no
A1JHX8	TDH_YERE8	1, ., 1, ., 1, ., 1, 0, 3	0.3192	0.8753	0.9266	yes	no
Q92MT4	XYLD_RHIME	1, ., 1, ., 1, ., 9	0.3851	0.8171	0.8526	yes	no
Q58D31	DHSO_BOVIN	1, ., 1, ., 1, ., 1, 4	0.4482	0.9501	0.9634	yes	no
A6W1W3	TDH_MARMS	1, ., 1, ., 1, ., 1, 0, 3	0.3302	0.8531	0.9032	yes	no
Q07786	DHSO2_YEAST	1, ., 1, ., 1, ., 1, 4	0.3937	0.9529	0.9635	yes	no
Q48AM4	TDH_COLP3	1, ., 1, ., 1, ., 1, 0, 3	0.3302	0.8642	0.9149	yes	no
Q00796	DHSO_HUMAN	1, ., 1, ., 1, ., 1, 4	0.4540	0.9501	0.9607	yes	no
Q9RTU4	TDH_DEIRA	1, ., 1, ., 1, ., 1, 0, 3	0.3445	0.8698	0.9022	yes	no
Q8U259	TDH_PYRFU	1, ., 1, ., 1, ., 1, 0, 3	0.3393	0.8864	0.9195	yes	no
Q5GN51	XYL2_ASPNG	1, ., 1, ., 1, ., 9	0.3976	0.9473	0.9553	yes	no
P36624	DHSO_SCHPO	1, ., 1, ., 1, ., 1, 4	0.3839	0.8725	0.875	yes	no
Q98D10	XYLD_RHILO	1, ., 1, ., 1, ., 9	0.3780	0.8836	0.9166	yes	no
Q1PSI9	IDND_VITVI	1, ., 1, ., 1, ., n, 8	0.8218	0.9639	0.9508	yes	no
P35497	DHSO1_YEAST	1, ., 1, ., 1, ., 1, 4	0.3909	0.9529	0.9635	yes	no
A7FCU5	TDH_YERP3	1, ., 1, ., 1, ., 1, 0, 3	0.3222	0.8753	0.9266	yes	no
Q66GC5	TDH_YERPS	1, ., 1, ., 1, ., 1, 0, 3	0.3222	0.8753	0.9266	yes	no
P22144	XYL2_PICST	1, ., 1, ., 1, ., 9	0.3442	0.9335	0.9283	yes	no
B1JQW2	TDH_YERPY	1, ., 1, ., 1, ., 1, 0, 3	0.3222	0.8753	0.9266	yes	no
Q4WAU7	XYL2_ASPFU	1, ., 1, ., 1, ., 9	0.4273	0.9362	0.9441	yes	no
Q06004	DHSO_BACSU	1, ., 1, ., 1, ., 1, 4	0.4022	0.9390	0.9603	yes	no
Q3IHW0	TDH_PSEHT	1, ., 1, ., 1, ., 1, 0, 3	0.3292	0.8698	0.9208	yes	no
Q5R5F3	DHSO_PONAB	1, ., 1, ., 1, ., 1, 4	0.4527	0.9529	0.9635	yes	no
Q8U7Y1	XYLD_AGRT5	1, ., 1, ., 1, ., 9	0.3795	0.8171	0.8428	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.983
4th Layer	1.1.1.n8	0.979

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	361
PLN02702	364	PLN02702, PLN02702, L-idonate 5-dehydrogenase	0.0
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	1e-176
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	1e-100
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	1e-96
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	8e-91
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	2e-89
cd08233	351	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio	5e-87
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	6e-85
cd08235	343	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas	2e-80
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	9e-71
cd05281	341	cd05281, TDH, Threonine dehydrogenase	3e-70
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	8e-70
PRK05396	341	PRK05396, tdh, L-threonine 3-dehydrogenase; Valida	1e-69
PRK09880	343	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Pro	1e-63
TIGR00692	340	TIGR00692, tdh, L-threonine 3-dehydrogenase	2e-63
cd08239	339	cd08239, THR_DH_like, L-threonine dehydrogenase (T	3e-62
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	4e-62
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	1e-58
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	7e-55
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	4e-53
cd08279	363	cd08279, Zn_ADH_class_III, Class III alcohol dehyd	4e-53
cd08256	350	cd08256, Zn_ADH2, Alcohol dehydrogenases of the MD	1e-52
cd08284	344	cd08284, FDH_like_2, Glutathione-dependent formald	3e-52
cd08231	361	cd08231, MDR_TM0436_like, Hypothetical enzyme TM04	3e-52
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	3e-52
cd08283	386	cd08283, FDH_like_1, Glutathione-dependent formald	8e-51
PRK10083	339	PRK10083, PRK10083, putative oxidoreductase; Provi	1e-50
cd08286	345	cd08286, FDH_like_ADH2, formaldehyde dehydrogenase	3e-48
cd08262	341	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD	2e-46
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	2e-46
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	3e-46
cd08240	350	cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa	4e-46
cd08285	351	cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd	1e-45
cd08265	384	cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD	1e-44
cd08278	365	cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro	2e-44
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	2e-44
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	4e-44
cd08242	319	cd08242, MDR_like, Medium chain dehydrogenases/red	2e-43
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	2e-43
cd05279	365	cd05279, Zn_ADH1, Liver alcohol dehydrogenase and	5e-43
PRK10309	347	PRK10309, PRK10309, galactitol-1-phosphate dehydro	1e-41
cd05283	337	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA	2e-41
cd08281	371	cd08281, liver_ADH_like1, Zinc-dependent alcohol d	4e-41
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	1e-40
pfam08240	108	pfam08240, ADH_N, Alcohol dehydrogenase GroES-like	7e-40
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	2e-39
cd08287	345	cd08287, FDH_like_ADH3, formaldehyde dehydrogenase	3e-39
cd08282	375	cd08282, PFDH_like, Pseudomonas putida aldehyde-di	4e-38
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	3e-36
cd08277	365	cd08277, liver_alcohol_DH_like, Liver alcohol dehy	1e-35
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	3e-33
cd08300	368	cd08300, alcohol_DH_class_III, class III alcohol d	6e-32
cd08301	369	cd08301, alcohol_DH_plants, Plant alcohol dehydrog	3e-30
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	4e-30
TIGR03451	358	TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi	7e-30
cd08298	329	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA	9e-29
cd08299	373	cd08299, alcohol_DH_class_I_II_IV, class I, II, IV	1e-28
TIGR02818	368	TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat	1e-27
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	2e-27
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	2e-27
TIGR03989	369	TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa	3e-26
PLN02740	381	PLN02740, PLN02740, Alcohol dehydrogenase-like	6e-26
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	6e-26
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	1e-25
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	2e-25
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	3e-25
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	3e-25
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	5e-25
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	6e-24
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	2e-23
TIGR02819	393	TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenas	6e-23
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	2e-22
PLN02586	360	PLN02586, PLN02586, probable cinnamyl alcohol dehy	7e-22
PRK09422	338	PRK09422, PRK09422, ethanol-active dehydrogenase/a	9e-22
cd08230	355	cd08230, glucose_DH, Glucose dehydrogenase	1e-21
cd08296	333	cd08296, CAD_like, Cinnamyl alcohol dehydrogenases	1e-21
TIGR03201	349	TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1	4e-21
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	5e-21
PLN02514	357	PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase	1e-20
TIGR02824	325	TIGR02824, quinone_pig3, putative NAD(P)H quinone	2e-19
PLN02827	378	PLN02827, PLN02827, Alcohol dehydrogenase-like	3e-19
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	2e-17
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	2e-17
TIGR02822	329	TIGR02822, adh_fam_2, zinc-binding alcohol dehydro	2e-17
cd08275	337	cd08275, MDR3, Medium chain dehydrogenases/reducta	5e-17
TIGR03366	280	TIGR03366, HpnZ_proposed, putative phosphonate cat	6e-17
PLN02178	375	PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase	1e-15
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	7e-15
cd08238	410	cd08238, sorbose_phosphate_red, L-sorbose-1-phosph	1e-14
cd08237	341	cd08237, ribitol-5-phosphate_DH, ribitol-5-phospha	1e-14
cd08248	350	cd08248, RTN4I1, Human Reticulon 4 Interacting Pro	3e-14
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	2e-13
smart00829	287	smart00829, PKS_ER, Enoylreductase	2e-13
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	8e-13
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	7e-12
TIGR01751	398	TIGR01751, crot-CoA-red, crotonyl-CoA reductase	2e-11
cd08246	393	cd08246, crotonyl_coA_red, crotonyl-CoA reductase	6e-11
cd08244	324	cd08244, MDR_enoyl_red, Possible enoyl reductase	9e-10
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	1e-08
cd08291	324	cd08291, ETR_like_1, 2-enoyl thioester reductase (	2e-08
cd08251	303	cd08251, polyketide_synthase, polyketide synthase	1e-07
PRK10754	327	PRK10754, PRK10754, quinone oxidoreductase, NADPH-	4e-07
pfam13602	129	pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenas	7e-07
TIGR01202	308	TIGR01202, bchC, 2-desacetyl-2-hydroxyethyl bacter	1e-06
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	3e-06
cd08252	336	cd08252, AL_MDR, Arginate lyase and other MDR fami	5e-06
cd08292	324	cd08292, ETR_like_2, 2-enoyl thioester reductase (	8e-06
cd08247	352	cd08247, AST1_like, AST1 is a cytoplasmic protein	8e-06
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	3e-05
TIGR02823	323	TIGR02823, oxido_YhdH, putative quinone oxidoreduc	0.003

>gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase

 Score =  687 bits (1774), Expect = 0.0
 Identities = 275/355 (77%), Positives = 321/355 (90%)

Query: 7   DDEGDKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANF 66
           +  G + +NMAAWL+G+ TLKIQP+ LP LGP DV+VR+KA+GICGSDVH+ KTMRCA+F
Sbjct: 10  EGSGVEEENMAAWLVGVNTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADF 69

Query: 67  IVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF 126
           +VK+PMVIGHECAGIIEEVGSEVK L VGDRVALEPGISC  C+LCK G YNLCPEM+FF
Sbjct: 70  VVKEPMVIGHECAGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFF 129

Query: 127 GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMG 186
            +PP +GSLA++VVHPA LC+KLP+NVSLEEGAMCEPLSVGVHACRRAN+GPETNV++MG
Sbjct: 130 ATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMCEPLSVGVHACRRANIGPETNVLVMG 189

Query: 187 SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 246
           +GPIGLVT+LAARAFGAPRI+I DVD +RLS+A+ LGADE   VST+IEDV+++V +IQ 
Sbjct: 190 AGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQK 249

Query: 247 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIF 306
           AMG GIDVSFDCVGF+KTMSTAL ATR GGKVCL+G+   EMTV LTPAAAREVDV+G+F
Sbjct: 250 AMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVPLTPAAAREVDVVGVF 309

Query: 307 RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361
           RYR+TWPLC+EFLRSGKIDVKPLITHRFGF+QKE+E+AFE SA+GGNAIKVMFNL
Sbjct: 310 RYRNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFNL 364

Length = 364

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score =  493 bits (1271), Expect = e-176
 Identities = 180/346 (52%), Positives = 239/346 (69%), Gaps = 6/346 (1%)

Query: 17  AAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGH 76
           AA L G   L+++   +P  GP +V VR++A+GICGSDVH++K  R  +F+VK+PMV+GH
Sbjct: 1   AAVLHGPGDLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGH 60

Query: 77  ECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLA 136
           E AG +  VGS V  L+VGDRVA+EPG+ C  C  CK+G YNLCP+MRF  +PP +G+L 
Sbjct: 61  ESAGTVVAVGSGVTHLKVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLC 120

Query: 137 HKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLL 196
             V HPA  C+KLPDNVSLEEGA+ EPLSVGVHACRRA V P   V++ G+GPIGL+T  
Sbjct: 121 RYVNHPADFCHKLPDNVSLEEGALVEPLSVGVHACRRAGVRPGDTVLVFGAGPIGLLTAA 180

Query: 197 AARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS-GIDVS 255
            A+AFGA ++++TD+D  RL  A+ LGA  T  V T  ED      KI   +G  G DV 
Sbjct: 181 VAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT--EDTPESAEKIAELLGGKGPDVV 238

Query: 256 FDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLC 315
            +C G +  + TA+ ATRPGG V L+G+ K E+T+ L+ A+ RE+D+ G+FRY +T+P  
Sbjct: 239 IECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPLSAASLREIDIRGVFRYANTYPTA 298

Query: 316 IEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGN-AIKVMFN 360
           IE L SGK+DVKPLITHRF    ++  +AFE +A+G    IKV+  
Sbjct: 299 IELLASGKVDVKPLITHRFPL--EDAVEAFETAAKGKKGVIKVVIE 342

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score =  300 bits (771), Expect = e-100
 Identities = 124/341 (36%), Positives = 182/341 (53%), Gaps = 13/341 (3%)

Query: 22  GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGI 81
               L+++    P  GP +V+VR+ A GICGSD+H+++        +++PMV+GHE +G+
Sbjct: 5   AAGDLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGV 64

Query: 82  IEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS----PPTNGSLAH 137
           +E VG  V  L  G RVA+ P   CG C  C+AG  NLC  MRF GS    P   G    
Sbjct: 65  VEAVGPGVTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFRE 124

Query: 138 KVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLA 197
            +V  A  C  LPD +SL   A+ EPL+V +HA  RA       V++ G+GPIG + + A
Sbjct: 125 YLVVDASQCVPLPDGLSLRRAALAEPLAVALHAVNRAGDLAGKRVLVTGAGPIGALVVAA 184

Query: 198 ARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 257
           AR  GA  I+ TD+    L++AR +GADET  ++ D             A     DV F+
Sbjct: 185 ARRAGAAEIVATDLADAPLAVARAMGADETVNLARDPLAAYA-------ADKGDFDVVFE 237

Query: 258 CVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIE 317
             G    +++AL   RPGG V  +G+    + + L    A+E+D+ G FR+   +   + 
Sbjct: 238 ASGAPAALASALRVVRPGGTVVQVGMLGGPVPLPLNALVAKELDLRGSFRFDDEFAEAVR 297

Query: 318 FLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 358
            L +G+IDV+PLIT  F     E  +AF ++A    ++KV 
Sbjct: 298 LLAAGRIDVRPLITAVFPLE--EAAEAFALAADRTRSVKVQ 336

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score =  290 bits (744), Expect = 1e-96
 Identities = 133/360 (36%), Positives = 191/360 (53%), Gaps = 33/360 (9%)

Query: 16  MAAWLL-GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVH-HFKTMRCANFIVKKPMV 73
           M A +L G   L+ +    P  GP +V V++KA GICGSD+  +  T          P+V
Sbjct: 1   MKALVLTGPGDLRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGA-----YHPPLV 55

Query: 74  IGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNG 133
           +GHE +G +EEVGS V  L VGDRVA+ P + CG C  CK G Y+LC    + GS   +G
Sbjct: 56  LGHEFSGTVEEVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSR-RDG 114

Query: 134 SLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLV 193
           + A  V  PA+   K+PD+V  EE AM EP +V +HA R A +     V+++G+G IGL+
Sbjct: 115 AFAEYVSVPARNLIKIPDHVDYEEAAMIEPAAVALHAVRLAGITLGDTVVVIGAGTIGLL 174

Query: 194 TLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM-GSGI 252
            +   +  GA R+I  D+D ++L++AR LGAD+T      I   + DV K++    G G 
Sbjct: 175 AIQWLKILGAKRVIAVDIDDEKLAVARELGADDT------INPKEEDVEKVRELTEGRGA 228

Query: 253 DVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAA------REVDVIGIF 306
           D+  +  G   T+  AL   RPGGKV L+G+   ++T       A      +E+ + G +
Sbjct: 229 DLVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVT---LSEEAFEKILRKELTIQGSW 285

Query: 307 RYRST------WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNA-IKVMF 359
              S       W   ++ L SGKI V+PLITHR     ++   AFE  A       KV+ 
Sbjct: 286 NSYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPL--EDGPAAFERLADREEFSGKVLL 343

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score =  275 bits (705), Expect = 8e-91
 Identities = 124/346 (35%), Positives = 187/346 (54%), Gaps = 16/346 (4%)

Query: 17  AAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGH 76
           A    G   L+++   +P  GP +V +++ A GICG+D+H ++      F    P+V GH
Sbjct: 3   ALVYEGPGELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYE----GEFGAAPPLVPGH 58

Query: 77  ECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLA 136
           E AG++  VGS+V   +VGDRVA++P I CG C  C+ G  NLC  +   G    NG  A
Sbjct: 59  EFAGVVVAVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVT-RNGGFA 117

Query: 137 HKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLL 196
             VV PAK  YK+PDN+S EE A+ EPLS  VH      + P  +V++ G+GPIGL+   
Sbjct: 118 EYVVVPAKQVYKIPDNLSFEEAALAEPLSCAVHGLDLLGIKPGDSVLVFGAGPIGLLLAQ 177

Query: 197 AARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF 256
             +  GA R+ + + + ++L +A+ LGA ET      ++    D    +     G DV  
Sbjct: 178 LLKLNGASRVTVAEPNEEKLELAKKLGATET------VDPSREDPEAQKEDNPYGFDVVI 231

Query: 257 DCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTP--AAAREVDVIGIFRYRSTWPL 314
           +  G  KT+  A+   R GG V + G+   +  V+++P     +E+ +IG F    T+P 
Sbjct: 232 EATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFINPYTFPR 291

Query: 315 CIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 360
            I  L SGKIDVK L++HR     +E+ +A E   + G A+KV+  
Sbjct: 292 AIALLESGKIDVKGLVSHRLPL--EEVPEALE-GMRSGGALKVVVV 334

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score =  272 bits (697), Expect = 2e-89
 Identities = 120/354 (33%), Positives = 179/354 (50%), Gaps = 18/354 (5%)

Query: 17  AAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGH 76
           A   +G   ++++    P  GP DV +R+ A GICGSD+H ++      F+    +++GH
Sbjct: 4   AVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGE--PFVPPGDIILGH 61

Query: 77  ECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS----PPTN 132
           E  G + EVG  V+  +VGDRV +EP I CGHC  C+AG YNLC    F+G        +
Sbjct: 62  EFVGEVVEVG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGID 120

Query: 133 GSLAHKVVHPAKLCY-KLPDNVSLEEGAMCEPLSVGVHAC-RRANVGPETNVMIMGSGPI 190
           G  A  V  PA     KLPD +  E  A+ EPL+   H    RA V P   V+++G+GPI
Sbjct: 121 GGFAEYVRVPADFNLAKLPDGIDEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPI 180

Query: 191 GLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS 250
           GL+ +  A+  GA  +I+ D   +RL +A+  G  +      +  + D     ++   G 
Sbjct: 181 GLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVV---VNPSEDDAGAEILELTGGR 237

Query: 251 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAA-AREVDVIGIFR-- 307
           G DV  + VG    +  AL A RPGG V ++G+   E          ++E+ + G  R  
Sbjct: 238 GADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPS 297

Query: 308 YRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGN-AIKVMFN 360
            R  +   ++ L SGKID + LITHR      +  +A+E+ A     AIKV+  
Sbjct: 298 GREDFERALDLLASGKIDPEKLITHRLPL--DDAAEAYELFADRKEEAIKVVLK 349

Length = 350

>gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase

 Score =  265 bits (681), Expect = 5e-87
 Identities = 130/341 (38%), Positives = 185/341 (54%), Gaps = 18/341 (5%)

Query: 17  AAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKK------ 70
           AA   G K ++++    P + P +VK+++   GICGSD+H +  +    FI  +      
Sbjct: 3   AARYHGRKDIRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEY--LDGPIFIPTEGHPHLT 60

Query: 71  ----PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF 126
               P+ +GHE +G++ EVGS V   +VGDRV +EP I CG C  CK G YNLC  + F 
Sbjct: 61  GETAPVTLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFI 120

Query: 127 GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMG 186
           G     G  A  VV PA   +KLPDNV LEE A+ EPL+V  HA RR+   P    +++G
Sbjct: 121 GLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALVEPLAVAWHAVRRSGFKPGDTALVLG 180

Query: 187 SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 246
           +GPIGL+T+LA +A GA +II+++    R  +A  LGA      +    DV  +V K+  
Sbjct: 181 AGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTE--VDVVAEVRKLTG 238

Query: 247 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIF 306
             G G+DVSFDC G   T+ TA++A RP G    + + +  ++        +E  + G  
Sbjct: 239 --GGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEKTLTGSI 296

Query: 307 RY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFE 346
            Y R  +   I+ L SGKID +PLIT R       +E  FE
Sbjct: 297 CYTREDFEEVIDLLASGKIDAEPLITSRIPLEDI-VEKGFE 336

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score =  260 bits (667), Expect = 6e-85
 Identities = 127/327 (38%), Positives = 186/327 (56%), Gaps = 14/327 (4%)

Query: 34  PTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 93
           P  G  +V VR+K +GICGSD+H +      N     P ++GHE +G + EVG  V  L+
Sbjct: 20  PVPGAGEVLVRVKRVGICGSDLHIY---HGRNPFASYPRILGHELSGEVVEVGEGVAGLK 76

Query: 94  VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNV 153
           VGDRV ++P ISCG C  C+ G  N C  ++  G    +G  A  +V PA     +P+ +
Sbjct: 77  VGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHR-DGGFAEYIVVPAD-ALLVPEGL 134

Query: 154 SLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV 213
           SL++ A+ EPL++G HA RRA V     V+++G+GPIGL  +  A+A GA R+I+ D+D 
Sbjct: 135 SLDQAALVEPLAIGAHAVRRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDD 193

Query: 214 QRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATR 273
           +RL  AR LGAD+T  V    EDV   + ++ +  G G DV  D  G   +M  A+    
Sbjct: 194 ERLEFARELGADDTINVGD--EDVAARLRELTD--GEGADVVIDATGNPASMEEAVELVA 249

Query: 274 PGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITH 332
            GG+V L+GL+K  +T        +E+ ++G     R  +P  I+ L SGK+D + LITH
Sbjct: 250 HGGRVVLVGLSKGPVTFPDPEFHKKELTILGSRNATREDFPDVIDLLESGKVDPEALITH 309

Query: 333 RFGFTQKEIEDAFE-ISAQGGNAIKVM 358
           RF F   ++ +AF+   A  G  IKV+
Sbjct: 310 RFPFE--DVPEAFDLWEAPPGGVIKVL 334

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase

 Score =  248 bits (636), Expect = 2e-80
 Identities = 132/352 (37%), Positives = 201/352 (57%), Gaps = 23/352 (6%)

Query: 17  AAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGH 76
           AA L G   ++++   +P  GP +V V+++A GICG+DV   K +R  +  +K P ++GH
Sbjct: 3   AAVLHGPNDVRLEEVPVPEPGPGEVLVKVRACGICGTDV---KKIRGGHTDLKPPRILGH 59

Query: 77  ECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLA 136
           E AG I EVG  V   +VGDRV + P + CG C  C  G+ N+CP  + FG+   +G  A
Sbjct: 60  EIAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNL-YDGGFA 118

Query: 137 HKVVHPAKLC-----YKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIG 191
             V  PA         KLPDNVS EE A+ EPL+  ++A R+A + P   V+++G+GPIG
Sbjct: 119 EYVRVPAWAVKRGGVLKLPDNVSFEEAALVEPLACCINAQRKAGIKPGDTVLVIGAGPIG 178

Query: 192 LVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG 251
           L+  + A+A GA ++I++D++  RL  A+ LGAD T   +   ED+   V ++ +  G G
Sbjct: 179 LLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAE--EDLVEKVRELTD--GRG 234

Query: 252 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAA--AREVDVIGIFRYR 309
            DV     G  +  + AL   R GG++   G      TV + P     RE+ + G   Y 
Sbjct: 235 ADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITG--SYA 292

Query: 310 ST---WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 358
           ++   +   +E + SGKIDVK LITHRF    ++IE+AFE++A  G ++K++
Sbjct: 293 ASPEDYKEALELIASGKIDVKDLITHRFPL--EDIEEAFELAAD-GKSLKIV 341

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  221 bits (566), Expect = 9e-71
 Identities = 94/284 (33%), Positives = 147/284 (51%), Gaps = 17/284 (5%)

Query: 40  DVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVA 99
           +V VR++A G+CG+D+H  +         K P+++GHE AG++ EVG  V  ++VGDRV 
Sbjct: 1   EVLVRVEAAGLCGTDLHIRRGGYPPP--PKLPLILGHEGAGVVVEVGPGVTGVKVGDRVV 58

Query: 100 LEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGA 159
           + P + CG C LC+                  +G  A  VV PA     LPD +SLEE A
Sbjct: 59  VLPNLGCGTCELCRE-----LCPGGGILGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAA 113

Query: 160 M-CEPLSVGVHACRRAN-VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS 217
           +  EPL+   HA RRA  + P   V+++G+G +GL+    A+A GA R+I+TD   ++L 
Sbjct: 114 LLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLE 172

Query: 218 IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGK 277
           +A+ LGAD            +    +++   G G DV  D VG  +T++ AL   RPGG+
Sbjct: 173 LAKELGADHVIDYKE-----EDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGR 227

Query: 278 VCLIGLAKTEMTVA-LTPAAAREVDVIGIFRY-RSTWPLCIEFL 319
           + ++G       +  L     +E+ +IG     R  +   ++ L
Sbjct: 228 IVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTREDFEEALDLL 271

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase

 Score =  222 bits (569), Expect = 3e-70
 Identities = 109/331 (32%), Positives = 174/331 (52%), Gaps = 13/331 (3%)

Query: 34  PTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 93
           P  GP +V +++ A  ICG+DVH ++    A   +K P++ GHE AG + EVG  V  ++
Sbjct: 21  PKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVK 80

Query: 94  VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNV 153
           VGD V+ E  I CG C  C+ G+Y++C   +  G   T+G  A  VV P +  +K   ++
Sbjct: 81  VGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGV-DTDGCFAEYVVVPEENLWKNDKDI 139

Query: 154 SLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV 213
             E  ++ EPL   VH     +V    +V+I G GPIGL+ +  A+A GA  +I +D + 
Sbjct: 140 PPEIASIQEPLGNAVHTVLAGDV-SGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNP 198

Query: 214 QRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATR 273
            RL +A+ +GAD         E+   +V  + +  G+G+DV  +  G  K +   L A  
Sbjct: 199 YRLELAKKMGADVVINPR---EEDVVEVKSVTD--GTGVDVVLEMSGNPKAIEQGLKALT 253

Query: 274 PGGKVCLIGLAKTEMTVALTPAAA-REVDVIGIF--RYRSTWPLCIEFLRSGKIDVKPLI 330
           PGG+V ++GL    + + L      + + V GI   +   TW      L+SGK+D+ P+I
Sbjct: 254 PGGRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRKMFETWYQVSALLKSGKVDLSPVI 313

Query: 331 THRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361
           TH+     ++ E+AFE+  + G   KV+   
Sbjct: 314 THKLPL--EDFEEAFEL-MRSGKCGKVVLYP 341

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score =  220 bits (563), Expect = 8e-70
 Identities = 106/294 (36%), Positives = 160/294 (54%), Gaps = 14/294 (4%)

Query: 34  PTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 93
           P  GP +V +++ A GICGSD+H +K        V+ P+V+GHE +G I EVG +V+  +
Sbjct: 22  PEPGPGEVLIKVAAAGICGSDLHIYKG---DYDPVETPVVLGHEFSGTIVEVGPDVEGWK 78

Query: 94  VGDRVALEP-GISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDN 152
           VGDRV  E    +CG C  C+ G YNLCP  +  G+   +G  A  V+ P +  ++LP+N
Sbjct: 79  VGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQ-ADGGFAEYVLVPEESLHELPEN 137

Query: 153 VSLEEGAMCEPLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIII-TD 210
           +SLE  A+ EPL+V VHA   R+ + P   V++ G GPIGL+    A+  GA  +++ T+
Sbjct: 138 LSLEAAALTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGATVVVVGTE 197

Query: 211 VDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALN 270
            D  RL +A+ LGAD    V+   ED+   V +I +  G G DV  +C G    +  AL 
Sbjct: 198 KDEVRLDVAKELGADA---VNGGEEDLAELVNEITD--GDGADVVIECSGAVPALEQALE 252

Query: 271 ATRPGGKVCLIGL-AKTEMTVALTPAAAREVDVIGIFRYRST-WPLCIEFLRSG 322
             R GG++  +G+      ++ +     +E+ VIG        W   +  L SG
Sbjct: 253 LLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSRSSTPASWETALRLLASG 306

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated

 Score =  221 bits (565), Expect = 1e-69
 Identities = 110/330 (33%), Positives = 171/330 (51%), Gaps = 14/330 (4%)

Query: 34  PTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 93
           P  GP DV +++K   ICG+DVH +     A   +  PMV+GHE  G + EVGSEV   +
Sbjct: 21  PEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK 80

Query: 94  VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNV 153
           VGDRV+ E  I CGHC  C+AG  +LC   +  G     G+ A  +V PA   +K+PD++
Sbjct: 81  VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGV-NRPGAFAEYLVIPAFNVWKIPDDI 139

Query: 154 SLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV 213
             +  A+ +P    VH     ++  E  V+I G+GPIG++    A+  GA  ++ITDV+ 
Sbjct: 140 PDDLAAIFDPFGNAVHTALSFDLVGED-VLITGAGPIGIMAAAVAKHVGARHVVITDVNE 198

Query: 214 QRLSIARNLGADETAKVS-TDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNAT 272
            RL +AR +GA     V+  D+ DV  ++G     M  G DV  +  G        L+  
Sbjct: 199 YRLELARKMGATRAVNVAKEDLRDVMAELG-----MTEGFDVGLEMSGAPSAFRQMLDNM 253

Query: 273 RPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIF--RYRSTWPLCIEFLRSGKIDVKPLI 330
             GG++ ++G+   +M +       + + + GI+      TW      L+SG +D+ P+I
Sbjct: 254 NHGGRIAMLGIPPGDMAIDWNKVIFKGLTIKGIYGREMFETWYKMSALLQSG-LDLSPII 312

Query: 331 THRFGFTQKEIEDAFEISAQGGNAIKVMFN 360
           THRF     + +  FE   + G + KV+ +
Sbjct: 313 THRFPID--DFQKGFEA-MRSGQSGKVILD 339

Length = 341

>gnl|CDD|182130 PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional

 Score =  205 bits (524), Expect = 1e-63
 Identities = 100/323 (30%), Positives = 156/323 (48%), Gaps = 15/323 (4%)

Query: 39  QDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRV 98
               V+I   GICGSD+H+++  +  NF++K PMV+GHE  G I    S+   L+ G  V
Sbjct: 28  NGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVH--SDSSGLKEGQTV 85

Query: 99  ALEPGISCGHCSLCKAGSYNLCPEMRFFGS----PPTNGSLAHKVVHPAKLCYKLPDNVS 154
           A+ P   CGHC  C + + N C  MRFFGS    P  +G      V     C   P+   
Sbjct: 86  AINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKAD 145

Query: 155 LEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ 214
            +  A  EPL+V +HA  +A       V + G GPIG + + A +  GA  I+  DV  +
Sbjct: 146 EKVMAFAEPLAVAIHAAHQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPR 205

Query: 215 RLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRP 274
            LS+AR +GAD+       +   + D+   +   G   DVSF+  G   +++T L  TR 
Sbjct: 206 SLSLAREMGADKL------VNPQNDDLDHYKAEKGY-FDVSFEVSGHPSSINTCLEVTRA 258

Query: 275 GGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRF 334
            G +  +G+        +     +E+ + G FR+   +   + +L +G I+  PL++  +
Sbjct: 259 KGVMVQVGMGGAPPEFPMMTLIVKEISLKGSFRFTEEFNTAVSWLANGVINPLPLLSAEY 318

Query: 335 GFTQKEIEDAFEISAQGGNAIKV 357
            FT   +E+A   +     A KV
Sbjct: 319 PFTD--LEEALIFAGDKTQAAKV 339

Length = 343

>gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase

 Score =  205 bits (523), Expect = 2e-63
 Identities = 112/328 (34%), Positives = 176/328 (53%), Gaps = 13/328 (3%)

Query: 33  LPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL 92
           +P  GP +V +++ A  ICG+DVH +     A   +K P V+GHE AG +  +G  V+ +
Sbjct: 18  VPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGI 77

Query: 93  EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDN 152
           +VGD V++E  I CG C  C+ G Y++C   + FG   T+G  A   V PA+  +K P +
Sbjct: 78  KVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGV-DTDGCFAEYAVVPAQNIWKNPKS 136

Query: 153 VSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 212
           +  E   + EPL   VH      +  ++ V++ G+GPIGL+ +  A+A GA  +I++D +
Sbjct: 137 IPPEYATIQEPLGNAVHTVLAGPISGKS-VLVTGAGPIGLMAIAVAKASGAYPVIVSDPN 195

Query: 213 VQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNAT 272
             RL +A+ +GA     V+   EDV  +V  +    G G+DV  +  G  K +   L A 
Sbjct: 196 EYRLELAKKMGATYV--VNPFKEDVVKEVADL--TDGEGVDVFLEMSGAPKALEQGLQAV 251

Query: 273 RPGGKVCLIGLAKTEMTVALTPAAA-REVDVIGIF--RYRSTWPLCIEFLRSGKIDVKPL 329
            PGG+V L+GL   ++T+  T     + + + GI       TW      ++SGK+D+ P+
Sbjct: 252 TPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITGRHMFETWYTVSRLIQSGKLDLDPI 311

Query: 330 ITHRFGFTQKEIEDAFEI--SAQGGNAI 355
           ITH+F F   + E  FE+  S Q G  I
Sbjct: 312 ITHKFKF--DKFEKGFELMRSGQTGKVI 337

This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340

>gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like

 Score =  201 bits (514), Expect = 3e-62
 Identities = 114/352 (32%), Positives = 177/352 (50%), Gaps = 22/352 (6%)

Query: 17  AAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGH 76
            A   G +T++++ + +P  GP +V +R+KA G+CGSD+H++           + ++ GH
Sbjct: 3   GAVFPGDRTVELREFPVPVPGPGEVLLRVKASGLCGSDLHYYY--HGHRAPAYQGVIPGH 60

Query: 77  ECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLA 136
           E AG++  VG  V    VGDRV +   + CG C  C+ G   LC   R       +G  A
Sbjct: 61  EPAGVVVAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHA 120

Query: 137 HKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGV----HACRRANVGPETNVMIMGSGPIGL 192
             ++ P K    LPD++S  +GA+   L  G+    HA RR  V     V+++G+GP+GL
Sbjct: 121 EYMLVPEKTLIPLPDDLSFADGAL---LLCGIGTAYHALRRVGVSGRDTVLVVGAGPVGL 177

Query: 193 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKV-STDIEDVDTDVGKIQNAMGSG 251
             L+ ARA GA  +I  D   +RL +A+ LGAD        D++++           G+G
Sbjct: 178 GALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDDVQEIRELTS------GAG 231

Query: 252 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRST 311
            DV+ +C G       AL A RP G++ L+G               ++  +IG + Y S 
Sbjct: 232 ADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGELTIEVSNDLIRKQRTLIGSW-YFSV 290

Query: 312 WPL--CIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361
             +  C EFL   K++V  L+THRFG  Q    +A+ + AQ G + KV+F  
Sbjct: 291 PDMEECAEFLARHKLEVDRLVTHRFGLDQ--APEAYALFAQ-GESGKVVFVF 339

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score =  201 bits (514), Expect = 4e-62
 Identities = 108/333 (32%), Positives = 162/333 (48%), Gaps = 23/333 (6%)

Query: 34  PTLGPQDVKVRIKALGICGSDVHHF---KTMRCANFIVKKPMVIGHECAGIIEEVGSEVK 90
           P  GP +V V++KA G+C SD+H               K P+ +GHE AG + EVG+ V 
Sbjct: 22  PEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLT-----KLPLTLGHEIAGTVVEVGAGVT 76

Query: 91  SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLP 150
           + +VGDRVA+   I CG C+LC+ G  NLC      G    +G  A  +V PA+    +P
Sbjct: 77  NFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGL-GIDGGFAEYIVVPARALVPVP 135

Query: 151 DNVSLEEGA-MCEPLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIII 208
           D V   + A   + +    HA  R   V P   V+++G G +GL  +  A+A GA  +I 
Sbjct: 136 DGVPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIA 194

Query: 209 TDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTA 268
            D+  ++L +A+ LGADE           D+   K    +G G DV FD VG   T   A
Sbjct: 195 VDIKEEKLELAKELGADEVLNS-----LDDSPKDKKAAGLGGGFDVIFDFVGTQPTFEDA 249

Query: 269 LNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVK 327
             A +PGG++ ++GL + ++TV L+   ARE+ +IG F       P  ++ +  GK+D  
Sbjct: 250 QKAVKPGGRIVVVGLGRDKLTVDLSDLIARELRIIGSFGGTPEDLPEVLDLIAKGKLD-- 307

Query: 328 PLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 360
                       EI +  E   +G    +V+  
Sbjct: 308 -PQVETRPL--DEIPEVLERLHKGKVKGRVVLV 337

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score =  192 bits (491), Expect = 1e-58
 Identities = 102/331 (30%), Positives = 155/331 (46%), Gaps = 21/331 (6%)

Query: 37  GPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGD 96
           GP D  VR+ A  ICGSD+H     R      K  M++GHE  G + EVGS+VK L+ GD
Sbjct: 24  GPHDAIVRVTATSICGSDLH---IYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPGD 80

Query: 97  RVALEPGISCGHCSLCKAGSYNLC----PEMRFFGSPPTNGSLAHKVVHPA--KLCYKLP 150
           RV++     CG C  C+ G +  C       +       +G  A  V  P       K+P
Sbjct: 81  RVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRI--DGGQAEYVRVPYADMNLAKIP 138

Query: 151 DNVSLEEGAMC-EPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIIT 209
           D +  E+  M  + L  G H    A + P + V ++G+GP+GL  +  AR  GA RII  
Sbjct: 139 DGLPDEDALMLSDILPTGFHGAELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAV 198

Query: 210 DVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTAL 269
           D + +RL +A+  GA +   ++    D+   + ++    G G+D   + VGF++T   A+
Sbjct: 199 DSNPERLDLAKEAGATDI--INPKNGDIVEQILELTG--GRGVDCVIEAVGFEETFEQAV 254

Query: 270 NATRPGGKVCLIGLAKTEMTVAL-TPAAAREVDV-IGIFRYRSTWPLCIEFLRSGKIDVK 327
              RPGG +  +G+      + L      + +    G+   R+  P  ++ +  GKID  
Sbjct: 255 KVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPVRARMPELLDLIEEGKIDPS 314

Query: 328 PLITHRFGFTQKEIEDAFEISAQG-GNAIKV 357
            LITHRF      I  A+ +        IKV
Sbjct: 315 KLITHRFPLDD--ILKAYRLFDNKPDGCIKV 343

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score =  183 bits (467), Expect = 7e-55
 Identities = 106/358 (29%), Positives = 152/358 (42%), Gaps = 43/358 (12%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
           K L+I+   L      +V VRI A G+C +D H         F    P V+GHE AGI+E
Sbjct: 13  KPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEGF----PAVLGHEGAGIVE 68

Query: 84  EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMR---FFGSPP--------TN 132
            VG  V S++ GD V L     CG C  C +G  NLC  +R     G+ P          
Sbjct: 69  AVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNG 128

Query: 133 GSLAH---------KVVHPAKLCYKLPDNVSLEEGAMCEPLSVGV-----HACRRANVGP 178
             + H           V       K+  +  LE+      L  GV          A V P
Sbjct: 129 VPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKAC---LLGCGVTTGIGAVVNTAKVEP 185

Query: 179 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVD 238
              V + G G +GL  +  A+A GA RII  D++ ++L +A+  GA           +VD
Sbjct: 186 GDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPK----EVD 241

Query: 239 TDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPA--- 295
             V  I      G D +F+CVG  + M  AL AT  GG   +IG+A     ++  P    
Sbjct: 242 DVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLV 301

Query: 296 AAREV--DVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG 351
             R       G  R RS  P  ++   +GK+ +  L+TH      ++I +AF++  +G
Sbjct: 302 TGRVWKGSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPL--EDINEAFDLMHEG 357

Length = 366

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score =  178 bits (454), Expect = 4e-53
 Identities = 102/339 (30%), Positives = 156/339 (46%), Gaps = 25/339 (7%)

Query: 17  AAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIG 75
           AA L    K L+++   +P  GP  V VR+   G+C SD+H    +       K P  +G
Sbjct: 3   AARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLG 62

Query: 76  HECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSL 135
           HE AG +EEVGS V  L+ GD V + P   CG C  C+ G  N C   RF G   T+G  
Sbjct: 63  HENAGWVEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGI-GTDGGF 121

Query: 136 AHKVVHPAKLCYKLPDNVSLEEGAMCEPLS-VGV---HACRRAN--VGPETNVMIMGSGP 189
           A  ++ P++   KLP  +   E A   PL+  G+   HA ++A   + P + V+++G G 
Sbjct: 122 AEYLLVPSRRLVKLPRGLDPVEAA---PLADAGLTAYHAVKKALPYLDPGSTVVVIGVGG 178

Query: 190 IGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG 249
           +G + +   RA     +I  D   + L +A  LGAD    V    +DV  +V ++    G
Sbjct: 179 LGHIAVQILRALTPATVIAVDRSEEALKLAERLGADH---VLNASDDVVEEVRELTG--G 233

Query: 250 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIF--R 307
            G D   D VG D+T++ A      GG+  ++G       +  +     E+ VIG     
Sbjct: 234 RGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGG-HGRLPTSDLVPTEISVIGSLWGT 292

Query: 308 YRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFE 346
                 + +    SGK+  K  IT    F  ++  +A +
Sbjct: 293 RAELVEV-VALAESGKV--KVEITK---FPLEDANEALD 325

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase

 Score =  178 bits (455), Expect = 4e-53
 Identities = 109/361 (30%), Positives = 156/361 (43%), Gaps = 43/361 (11%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
           K L+I+   L   GP +V VRI A G+C SD+H        +     P V+GHE AG++E
Sbjct: 11  KPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVT----GDLPAPLPAVLGHEGAGVVE 66

Query: 84  EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE------MRFFGSPP------- 130
           EVG  V  ++ GD V L    +CG C  C  G  NLC         +             
Sbjct: 67  EVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGE 126

Query: 131 ------TNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGV-----HACRRANVGPE 179
                   G+ A   V P     K+ D++ L+  A+   L  GV          A V P 
Sbjct: 127 PVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAAL---LGCGVTTGVGAVVNTARVRPG 183

Query: 180 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDT 239
             V ++G G +GL  +  AR  GA RII  D   ++L +AR  GA  T  V+   +D   
Sbjct: 184 DTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGA--THTVNASEDDAVE 241

Query: 240 DVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPA--AA 297
            V  + +  G G D +F+ VG   T+  AL  TR GG   ++G+     TV+L       
Sbjct: 242 AVRDLTD--GRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFL 299

Query: 298 REVDVIGIF----RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGN 353
            E  + G        R   P  ++  R+G++ +  L+T R+     EI +AF     G N
Sbjct: 300 SEKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSL--DEINEAFADMLAGEN 357

Query: 354 A 354
           A
Sbjct: 358 A 358

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363

>gnl|CDD|176218 cd08256, Zn_ADH2, Alcohol dehydrogenases of the MDR family

 Score =  177 bits (451), Expect = 1e-52
 Identities = 104/339 (30%), Positives = 175/339 (51%), Gaps = 25/339 (7%)

Query: 34  PTLGPQDVKVRIKALGICGSDVHHFKTMRCANFI---------VKKPMVIGHECAGIIEE 84
           P  GP ++ V+++A GIC  D+   K    A            VK PM+ GHE  G + E
Sbjct: 20  PRPGPGEILVKVEACGICAGDI---KCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVE 76

Query: 85  VGSEVKS--LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFG-SPPTNGSLAHKVVH 141
           +G   +   ++VGDRV  E  + C +C  C  G Y +C +   +G     NG +A  +  
Sbjct: 77  LGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRF 136

Query: 142 PAK-LCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARA 200
           P + + +K+PD++  E+  + EPL+  +HA  RAN+  +  V++ G+GP+GL  + AAR 
Sbjct: 137 PKEAIVHKVPDDIPPEDAILIEPLACALHAVDRANIKFDDVVVLAGAGPLGLGMIGAARL 196

Query: 201 FGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM-GSGIDVSFDCV 259
               ++I+ D+  +RL++AR  GAD       +  +VD  V KI+    G G D+  +  
Sbjct: 197 KNPKKLIVLDLKDERLALARKFGADVV----LNPPEVD-VVEKIKELTGGYGCDIYIEAT 251

Query: 260 GFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAR-EVDVIGIFRYRSTWPLCIEF 318
           G    +   LN  R  G+     +    +TV  +    R E+DV+G       +P+ I+ 
Sbjct: 252 GHPSAVEQGLNMIRKLGRFVEFSVFGDPVTVDWSIIGDRKELDVLGSHLGPYCYPIAIDL 311

Query: 319 LRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKV 357
           + SG++    ++TH+F    ++ E+AFE+ A+G ++IKV
Sbjct: 312 IASGRLPTDGIVTHQFPL--EDFEEAFELMARGDDSIKV 348

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 350

>gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

 Score =  176 bits (448), Expect = 3e-52
 Identities = 105/336 (31%), Positives = 158/336 (47%), Gaps = 23/336 (6%)

Query: 34  PTL-GPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL 92
           P +  P D  V++ A  ICGSD+H ++     +       V+GHE  G + EVG EV++L
Sbjct: 20  PQIQDPTDAIVKVTAAAICGSDLHIYR----GHIPSTPGFVLGHEFVGEVVEVGPEVRTL 75

Query: 93  EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF---GSPPTNGSLAHKVVHPA--KLCY 147
           +VGDRV     I+CG C  C+ G    C +   F   GSP  +G+ A  V  P       
Sbjct: 76  KVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLL 135

Query: 148 KLPDNVSLEEG-AMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRI 206
           KLPD +S E    + + L  G    +RA V P   V ++G GP+GL  +L+A+  GA R+
Sbjct: 136 KLPDGLSDEAALLLGDILPTGYFGAKRAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARV 195

Query: 207 IITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM-GSGIDVSFDCVGFDKTM 265
              D   +RL  A  LGA E              V +++ A  G G DV  + VG    +
Sbjct: 196 FAVDPVPERLERAAALGA-EPINFED-----AEPVERVREATEGRGADVVLEAVGGAAAL 249

Query: 266 STALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDV-IGIFRYRSTWPLCIEFLRSGK 323
             A +  RPGG +  +G+   E        A  + + +  G    RS +P  +  L SG+
Sbjct: 250 DLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRCPVRSLFPELLPLLESGR 309

Query: 324 IDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 359
           +D++ LI HR      E  +A+ +  +    +KV+ 
Sbjct: 310 LDLEFLIDHRMPLE--EAPEAYRLFDK-RKVLKVVL 342

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344

>gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

 Score =  176 bits (449), Expect = 3e-52
 Identities = 112/354 (31%), Positives = 162/354 (45%), Gaps = 31/354 (8%)

Query: 26  LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEV 85
           L+I+   LP L P  V VR++  G+CGSDVH     R     V  P+++GHE  G +  +
Sbjct: 13  LEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRP---RVPLPIILGHEGVGRVVAL 69

Query: 86  GSEVKS------LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS------PPTNG 133
           G  V +      L+VGDRV    G  CG C  C  G    C   + +G       P  +G
Sbjct: 70  GGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSG 129

Query: 134 SLA-HKVVHPAKLCYKLPDNVSLE--EGAMCEPLSVGVHACRRAN-VGPETNVMIMGSGP 189
             A H  + P     ++PDNV  E    A C  L+  + A  RA  VG    V++ G+GP
Sbjct: 130 GYAEHIYLPPGTAIVRVPDNVPDEVAAPANC-ALATVLAALDRAGPVGAGDTVVVQGAGP 188

Query: 190 IGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG 249
           +GL  + AA+  GA R+I+ D   +RL +AR  GAD T  +  D          +++  G
Sbjct: 189 LGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADAT--IDIDELPDPQRRAIVRDITG 246

Query: 250 S-GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAA--REVDVIGIF 306
             G DV  +  G    +   L   R GG   L+G      TV L P     + + +IG+ 
Sbjct: 247 GRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVH 306

Query: 307 RYR-STWPLCIEFLR--SGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKV 357
            Y  S     + FL     +     L+THR+    ++I +A E  A+ G A+KV
Sbjct: 307 NYDPSHLYRAVRFLERTQDRFPFAELVTHRYP--LEDINEALE-LAESGTALKV 357

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score =  175 bits (447), Expect = 3e-52
 Identities = 100/337 (29%), Positives = 161/337 (47%), Gaps = 42/337 (12%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVH----HFKTMRCANFIVKKPMVIGHECA 79
           + L+I+   +P  GP +V ++++A G+C +D+H     +        + K P++ GHE  
Sbjct: 14  QPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWP-------VPKLPLIPGHEIV 66

Query: 80  GIIEEVGSEVKSLEVGDRVALE-PGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHK 138
           G + EVG  V  L+VGDRV +    ISCG C  C++G+ NLCP  +  G   T+G  A  
Sbjct: 67  GTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGY-TTDGGYAEY 125

Query: 139 VVHPAKLCYKLPDNVSLEEGAMCEPLS-VGV---HACRRANVGPETNVMIMGSGPIGLVT 194
           VV PA+   K+P+ + L E A   PL   G+    A ++ANV P   V ++G+G +G + 
Sbjct: 126 VVVPARYVVKIPEGLDLAEAA---PLLCAGITTYRALKKANVKPGKWVAVVGAGGLGHMA 182

Query: 195 LLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV 254
           +  A+A GA  +I      ++L +A+ LGAD           +++       A+    D 
Sbjct: 183 VQYAKAMGA-EVIAITRSEEKLELAKKLGADHV---------INSSDSDALEAVKEIADA 232

Query: 255 SFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAA--AREVDVIG--IFRYRS 310
             D VG   T+  +L A R GG + L+GL        L       +E+ ++G  +     
Sbjct: 233 IIDTVG-PATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTRAD 291

Query: 311 TWPLCIEFLR-SGKIDVKPLITHRFGFTQKEIEDAFE 346
                 E L  + +  +KP I         EI +A+E
Sbjct: 292 L----EEALDFAAEGKIKPEILETIPLD--EINEAYE 322

Length = 339

>gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

 Score =  173 bits (441), Expect = 8e-51
 Identities = 114/372 (30%), Positives = 167/372 (44%), Gaps = 66/372 (17%)

Query: 38  PQDVKVRIKALGICGSDVHHFKTMRCANFI--VKKPMVIGHECAGIIEEVGSEVKSLEVG 95
           P D  VR+ A  ICGSD+H         +I  +KK  ++GHE  G++EEVG EV++L+VG
Sbjct: 25  PTDAIVRVTATAICGSDLH-----LYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVG 79

Query: 96  DRVALEPGISCGHCSLCKAGSYNLC------PEMR---------FFGSPPTNGSLAH--- 137
           DRV +   I+CG C  CK G Y+ C       EM           FG     G  A    
Sbjct: 80  DRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQA 139

Query: 138 ---KVVHPAKLCYKLPDNVSLEEGA-MCEPLSVGVHACRRANVGPETNVMIMGSGPIGLV 193
              +V       +K+PD++S E+   + + L  G HA   A V P   V + G GP+GL 
Sbjct: 140 EYVRVPFADVGPFKIPDDLSDEKALFLSDILPTGYHAAELAEVKPGDTVAVWGCGPVGLF 199

Query: 194 TLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM-GSGI 252
              +A+  GA R+I  D   +RL +AR+    ET     + E+VD  V  ++    G G 
Sbjct: 200 AARSAKLLGAERVIAIDRVPERLEMARSHLGAET----INFEEVDDVVEALRELTGGRGP 255

Query: 253 DVSFDCVGFD-------KTMST--------------ALNATRPGGKVCLIGL-AKTEMTV 290
           DV  D VG +       K                  A+ A R GG V +IG+   T    
Sbjct: 256 DVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGGTVNKF 315

Query: 291 ALTPAAAREVDVIG----IFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFE 346
            +  A  + + +      + RY    P  +E + SG++D   +ITHR      +  +A++
Sbjct: 316 PIGAAMNKGLTLRMGQTHVQRY---LPRLLELIESGELDPSFIITHRLPLE--DAPEAYK 370

Query: 347 I-SAQGGNAIKV 357
           I   +    IKV
Sbjct: 371 IFDKKEDGCIKV 382

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386

>gnl|CDD|182229 PRK10083, PRK10083, putative oxidoreductase; Provisional

 Score =  171 bits (436), Expect = 1e-50
 Identities = 97/342 (28%), Positives = 162/342 (47%), Gaps = 20/342 (5%)

Query: 25  TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEE 84
           +L I+   +P     +V+V++K  GICGSD H +   R  N   K P VIGHE  G+I+ 
Sbjct: 11  SLAIEERPIPQPAAGEVRVKVKLAGICGSDSHIY---RGHNPFAKYPRVIGHEFFGVIDA 67

Query: 85  VGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAK 144
           VG  V +  +G+RVA++P ISCGHC  C  G  N+C  +   G    +G  +   V PAK
Sbjct: 68  VGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGV-HRDGGFSEYAVVPAK 126

Query: 145 LCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLA-ARAFGA 203
             +++PD ++ +   M EP ++  +   R     +   +I G+GP+GL  +      +  
Sbjct: 127 NAHRIPDAIADQYAVMVEPFTIAANVTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNV 186

Query: 204 PRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDK 263
             +I+ D   +RL++A+  GAD        I +    +G+     G    +  D      
Sbjct: 187 KAVIVADRIDERLALAKESGADWV------INNAQEPLGEALEEKGIKPTLIIDAACHPS 240

Query: 264 TMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYR---STWPLCIEFLR 320
            +  A+    P  ++ L+G +     +       +E   + IF  R   + +P+ I++L 
Sbjct: 241 ILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKE---LSIFSSRLNANKFPVVIDWLS 297

Query: 321 SGKIDVKPLITHRFGFTQKEIEDAFEISAQG-GNAIKVMFNL 361
            G ID + LITH F F  + + DA E+  +   +  KV+   
Sbjct: 298 KGLIDPEKLITHTFDF--QHVADAIELFEKDQRHCCKVLLTF 337

Length = 339

>gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like

 Score =  165 bits (420), Expect = 3e-48
 Identities = 102/343 (29%), Positives = 163/343 (47%), Gaps = 16/343 (4%)

Query: 22  GIKTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAG 80
           G   +  +    PT+  P D  V++    ICG+D+H    ++     V    ++GHE  G
Sbjct: 8   GPGKISWEDRPKPTIQEPTDAIVKMLKTTICGTDLH---ILKGDVPTVTPGRILGHEGVG 64

Query: 81  IIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAH--K 138
           ++EEVGS V + +VGDRV +    SCG C  C+ G Y+ C    +      +G+ A   +
Sbjct: 65  VVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVR 124

Query: 139 VVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHAC--RRANVGPETNVMIMGSGPIGLVTLL 196
           + H     YKLP+ V  E   M   +    + C      V P   V I+G+GP+GL  LL
Sbjct: 125 IPHADNSLYKLPEGVDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALL 184

Query: 197 AARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF 256
            A+ +   +II+ D+D  RL +A+ LGA  T   +    D    V ++ +  G G+DV  
Sbjct: 185 TAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAK--GDAIEQVLELTD--GRGVDVVI 240

Query: 257 DCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCI 316
           + VG   T         PGG +  +G+    + + L     + + +       +T P+ +
Sbjct: 241 EAVGIPATFELCQELVAPGGHIANVGVHGKPVDLHLEKLWIKNITITTGLVDTNTTPMLL 300

Query: 317 EFLRSGKIDVKPLITHRFGFTQKEIEDAFEIS--AQGGNAIKV 357
           + + SGK+D   L+THRF  +  EIE A++    A    A+KV
Sbjct: 301 KLVSSGKLDPSKLVTHRFKLS--EIEKAYDTFSAAAKHKALKV 341

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family

 Score =  160 bits (408), Expect = 2e-46
 Identities = 96/337 (28%), Positives = 151/337 (44%), Gaps = 28/337 (8%)

Query: 34  PTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPM--------VIGHECAGIIEEV 85
           P  GP  V V++ A GICGSD+H              P         V+GHE  G + + 
Sbjct: 19  PEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDY 78

Query: 86  GSEVKS-LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAK 144
           G   +  L+VG RV   P + CG  + C  G            SP   G  A  ++    
Sbjct: 79  GPGTERKLKVGTRVTSLPLLLCGQGASCGIGL-----------SPEAPGGYAEYMLLSEA 127

Query: 145 LCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAP 204
           L  ++PD +S+E+ A+ EPL+VG+HA RRA + P    +++G GPIGL  + A +A G  
Sbjct: 128 LLLRVPDGLSMEDAALTEPLAVGLHAVRRARLTPGEVALVIGCGPIGLAVIAALKARGVG 187

Query: 205 RIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI--DVSFDCVGFD 262
            I+ +D   +R ++A  +GAD    V     D        + A   G    V F+CVG  
Sbjct: 188 PIVASDFSPERRALALAMGAD---IVVDPAADSPFAAWAAELARAGGPKPAVIFECVGAP 244

Query: 263 KTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRS 321
             +   +    PGG++ ++G+      +    A  +E+ +     Y    +   ++ L  
Sbjct: 245 GLIQQIIEGAPPGGRIVVVGVCMESDNIEPALAIRKELTLQFSLGYTPEEFADALDALAE 304

Query: 322 GKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 358
           GK+DV P++T   G     + DAFE      +  K++
Sbjct: 305 GKVDVAPMVTGTVGL--DGVPDAFEALRDPEHHCKIL 339

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score =  161 bits (410), Expect = 2e-46
 Identities = 110/358 (30%), Positives = 163/358 (45%), Gaps = 44/358 (12%)

Query: 26  LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEV 85
           L I+   +P     ++ +R+ A G+C SD+H  K           P V+GHE +G + EV
Sbjct: 13  LTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLK----GELPFPPPFVLGHEISGEVVEV 68

Query: 86  GSEVKS---LEVGDRVALEPGISCGHCSLCKAGSYNLCP---------------EMRFFG 127
           G  V++   L VGDRV     + CG C  C  G  NLC                  R F 
Sbjct: 69  GPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFR 128

Query: 128 SPPT------NGSLAHKVVHPAKLCYKLPDNVSLEEGAM--CEPLSVGVHACRRAN-VGP 178
                      G LA   V PA     LP+++   E A+  C   +    A + A  V P
Sbjct: 129 LDGGPVYMYSMGGLAEYAVVPATALAPLPESLDYTESAVLGCAGFT-AYGALKHAADVRP 187

Query: 179 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVD 238
              V ++G G +G   +  A+AFGA  II  DV  ++L+ A+ LGA  T  V+   ED  
Sbjct: 188 GETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHT--VNAAKEDA- 244

Query: 239 TDVGKIQNAM-GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVAL--TPA 295
             V  I+    G G+DV  + +G  +T   AL+  R GG+  ++GLA    T  +  T  
Sbjct: 245 --VAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRL 302

Query: 296 AAREVDVIGIF--RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG 351
             R + +IG +  R R   P  +    SGK+D + L+TH++    +EI +A+E   +G
Sbjct: 303 VRRGIKIIGSYGARPRQDLPELVGLAASGKLDPEALVTHKYKL--EEINEAYENLRKG 358

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score =  160 bits (407), Expect = 3e-46
 Identities = 106/332 (31%), Positives = 159/332 (47%), Gaps = 45/332 (13%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
           + L+I+    P   P  V V ++A G+C SD H +   +  +  V  P V GHE AG++ 
Sbjct: 11  EPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGW---QGHDPDVTLPHVPGHEFAGVVV 67

Query: 84  EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRF--FGSPPTNGSLAHKV-V 140
           EVG +V    VGDRV +   + CG C  C+AG  N+C       F  P   GS A  V V
Sbjct: 68  EVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHP---GSFAEYVAV 124

Query: 141 HPAKL-CYKLPDNVSLEEGAMCEPLSVGVHACR----------RANVGPETNVMIMGSGP 189
             A +   +LPD+V     A      +G   CR          +A V P   V + G G 
Sbjct: 125 PRADVNLVRLPDDVDFVTAA-----GLG---CRFATAFRALVHQARVKPGEWVAVHGCGG 176

Query: 190 IGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG 249
           +GL  ++ A A GA R+I  D+D  +L +AR LGA  T   ++++EDV      +++  G
Sbjct: 177 VGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVN-ASEVEDV---AAAVRDLTG 231

Query: 250 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGL-AKTEMTVALTPA--AAREVDVIGIF 306
            G  VS D +G  +T   ++ + R  G+   +GL    E  VAL      ARE++++G  
Sbjct: 232 GGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSH 291

Query: 307 -----RYRSTWPLCIEFLRSGKIDVKPLITHR 333
                RY +     +  + SGK+D +PL+   
Sbjct: 292 GMPAHRYDAM----LALIASGKLDPEPLVGRT 319

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase

 Score =  160 bits (406), Expect = 4e-46
 Identities = 97/334 (29%), Positives = 147/334 (44%), Gaps = 22/334 (6%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVH---------HFKTMRCANFIVKKPMVI 74
           K L+      P     +V V++ A G+C SD+H           KTM   +  VK P+V+
Sbjct: 11  KPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVL 70

Query: 75  GHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGS 134
           GHE  G +  VG +   ++VGD+V + P I CG C +C AG  NLC + R  G    +G 
Sbjct: 71  GHEIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQ-DGG 129

Query: 135 LAHKVVHPAKLCYKLPDNVSLEEGAM--CEPLSVGVHACRRANVG-PETNVMIMGSGPIG 191
            A  V+ P       P  +     A   C  L+    A ++      +  V+I+G+G +G
Sbjct: 130 YAEYVIVPHSRYLVDPGGLDPALAATLACSGLTA-YSAVKKLMPLVADEPVVIIGAGGLG 188

Query: 192 LVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG 251
           L+ L   +A G   II+ D+D  +L  A+  GAD       +  D D    +I  A G G
Sbjct: 189 LMALALLKALGPANIIVVDIDEAKLEAAKAAGADVV----VNGSDPD-AAKRIIKAAGGG 243

Query: 252 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIF--RYR 309
           +D   D V    T S A +    GGK+ L+GL   E T+ L     R + + G +     
Sbjct: 244 VDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALTIQGSYVGSLE 303

Query: 310 STWPLCIEFLRSGKIDVKPLITHRFGFTQKEIED 343
               L +   ++GK+   PL           ++D
Sbjct: 304 ELREL-VALAKAGKLKPIPLTERPLSDVNDALDD 336

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350

>gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases

 Score =  159 bits (404), Expect = 1e-45
 Identities = 101/362 (27%), Positives = 152/362 (41%), Gaps = 36/362 (9%)

Query: 17  AAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGH 76
           A  +LGI  +      +P  GP D  VR  A+  C SDVH   T+       +  M++GH
Sbjct: 3   AFAMLGIGKVGWIEKPIPVCGPNDAIVRPTAVAPCTSDVH---TVWGGAPGERHGMILGH 59

Query: 77  ECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEM----RFFGSPPTN 132
           E  G++EEVGSEVK  + GDRV +            + G  +    M    +F  S   +
Sbjct: 60  EAVGVVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKF--SNFKD 117

Query: 133 GSLAHKVVHP---AKLCYKLPDNVSLEEGAMC-EPLSVGVHACRRANVGPETNVMIMGSG 188
           G  A         A L   LPD ++ E+  M  + +S G H    AN+     V + G G
Sbjct: 118 GVFAEYFHVNDADANL-APLPDGLTDEQAVMLPDMMSTGFHGAELANIKLGDTVAVFGIG 176

Query: 189 PIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM 248
           P+GL+ +  AR  GA RII       R+ +A+  GA +   V     DV   + K+    
Sbjct: 177 PVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDI--VDYKNGDVVEQILKLTG-- 232

Query: 249 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY 308
           G G+D      G   T   AL   +PGG +  +     +  + +     RE   +G+   
Sbjct: 233 GKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPI----PREEWGVGMGHK 288

Query: 309 RSTWPLC----------IEFLRSGKIDVKPLITHRF-GFTQKEIEDAFEISA-QGGNAIK 356
                LC             +  G++D   L+TH F GF   +IE+A  +   +  + IK
Sbjct: 289 TINGGLCPGGRLRMERLASLIEYGRVDPSKLLTHHFFGF--DDIEEALMLMKDKPDDLIK 346

Query: 357 VM 358
            +
Sbjct: 347 PV 348

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351

>gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family

 Score =  157 bits (398), Expect = 1e-44
 Identities = 97/342 (28%), Positives = 170/342 (49%), Gaps = 22/342 (6%)

Query: 26  LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFI----VKKPMVIGHECAGI 81
           L+++   +P L P ++ +R+KA GICGSD+H ++T +    +     + P+VIGHE +G+
Sbjct: 39  LRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGV 98

Query: 82  IEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVH 141
           +E+ G  VK+ E GD V  E  + CG C  C++GS N C  ++  G    +G+ A  +  
Sbjct: 99  VEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGF-SADGAFAEYIAV 157

Query: 142 PAKLCYKLPDNV-------SLEEGAMCEPLSVGVHAC--RRANVGPETNVMIMGSGPIGL 192
            A+  +++ +         + E GA+ EP SV  +    R     P   V++ G+GPIGL
Sbjct: 158 NARYAWEINELREIYSEDKAFEAGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGL 217

Query: 193 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM-GSG 251
             +  A+A GA ++I  ++  +R ++A+ +GAD     +           K+     G G
Sbjct: 218 AAIALAKAAGASKVIAFEISEERRNLAKEMGADYV--FNPTKMRDCLSGEKVMEVTKGWG 275

Query: 252 IDVSFDCVG-FDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYR- 309
            D+  +  G    T+     +    GK+  IG A T + + L     R   ++G   +  
Sbjct: 276 ADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPLHLEVLQVRRAQIVGAQGHSG 335

Query: 310 -STWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQ 350
              +P  I+ + SGKID+  +IT RF    + I +A + +++
Sbjct: 336 HGIFPSVIKLMASGKIDMTKIITARFPL--EGIMEAIKAASE 375

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384

>gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase

 Score =  156 bits (396), Expect = 2e-44
 Identities = 103/365 (28%), Positives = 154/365 (42%), Gaps = 52/365 (14%)

Query: 26  LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEV 85
             ++   L    P +V VRI A GIC +D+     +R        P V+GHE AG++E V
Sbjct: 15  FVLEDVELDDPRPDEVLVRIVATGICHTDLV----VRDGGLPTPLPAVLGHEGAGVVEAV 70

Query: 86  GSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEM--------RFFGSPP--TNG-- 133
           GS V  L+ GD V L    SCG C+ C +G    C           R  GS P   +   
Sbjct: 71  GSAVTGLKPGDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGT 129

Query: 134 ----------SLA-HKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHA-----CRRANVG 177
                     S A + VVH  +   K+  +V LE  A   PL  G+              
Sbjct: 130 PVHGHFFGQSSFATYAVVH-ERNVVKVDKDVPLELLA---PLGCGIQTGAGAVLNVLKPR 185

Query: 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDV 237
           P +++ + G+G +GL  ++AA+  G   II  D+   RL +A+ LGA  T  ++   ED+
Sbjct: 186 PGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGA--THVINPKEEDL 243

Query: 238 DTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK--TEMTVALTPA 295
              V  I+   G G+D + D  G    +  A++A  P G + L+G      E+T+ +   
Sbjct: 244 ---VAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDL 300

Query: 296 AAREVDVIGI---FRYRSTW-PLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG 351
                 + G+         + P  IE  R GK     L+T    +  ++I  A   S   
Sbjct: 301 LVSGKTIRGVIEGDSVPQEFIPRLIELYRQGKFPFDKLVTF---YPFEDINQAIADSE-S 356

Query: 352 GNAIK 356
           G  IK
Sbjct: 357 GKVIK 361

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score =  155 bits (393), Expect = 2e-44
 Identities = 104/331 (31%), Positives = 157/331 (47%), Gaps = 29/331 (8%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFI--VKKPMVIGHECAGI 81
           K L+I+    P  GP +V +++KA G+C  D+  +K      F    K P+++GHE  G 
Sbjct: 11  KPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWK-----GFFPRGKYPLILGHEIVGT 65

Query: 82  IEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVH 141
           +EEVG  V+  + GDRV L   I CG C  C +G  NLC     +G    +G  A  V  
Sbjct: 66  VEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGE-EVDGGFAEYVKV 124

Query: 142 PAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMG-SGPIGLVTLLAA 198
           P +   KLPDNVS E  A   C  +   VHA +RA V     V++ G  G +G+  +  A
Sbjct: 125 PERSLVKLPDNVSDESAALAAC-VVGTAVHALKRAGVKKGDTVLVTGAGGGVGIHAIQLA 183

Query: 199 RAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC 258
           +A GA  I +T    ++L I + LGAD       D      DV K+      G DV  + 
Sbjct: 184 KALGARVIAVTRSP-EKLKILKELGAD----YVIDGSKFSEDVKKL-----GGADVVIEL 233

Query: 259 VGFDKTMSTALNATRPGGKVCLIG-LAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCI 316
           VG   T+  +L +   GG++ LIG +      +       +E+ +IG     ++     +
Sbjct: 234 VG-SPTIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISATKADVEEAL 292

Query: 317 EFLRSGKIDVKPLITHRFGFTQKEIEDAFEI 347
           + ++ GKI  KP+I        ++I +A E 
Sbjct: 293 KLVKEGKI--KPVIDRVVSL--EDINEALED 319

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score =  154 bits (391), Expect = 4e-44
 Identities = 91/342 (26%), Positives = 141/342 (41%), Gaps = 47/342 (13%)

Query: 22  GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGI 81
           G + LK+     P  GP +V VR+KA G+   DV   + +  A  +   P + G E AG+
Sbjct: 11  GPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGL--APPVRPLPFIPGSEAAGV 68

Query: 82  IEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVH 141
           +  VGS V   +VGDRVA                           G    +G  A  VV 
Sbjct: 69  VVAVGSGVTGFKVGDRVA-------------------------ALGGVGRDGGYAEYVVV 103

Query: 142 PAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMG-SGPIGLVTLLAA 198
           PA     LPD +S EE A      L+  +    RA + P   V++ G +G +G   +  A
Sbjct: 104 PADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLA 163

Query: 199 RAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC 258
           +A GA  + +     ++L + + LGAD    ++   ED    V ++    G G+DV  D 
Sbjct: 164 KALGATVVAVVSSS-EKLELLKELGADHV--INYREEDFVEQVRELTG--GKGVDVVLDT 218

Query: 259 VGFDKTMSTALNATRPGGKVCLIGLA--KTEMTVALTPAAAREVDVIGIFRYRSTWPLCI 316
           VG   T + +L A  PGG++  IG       + + L P   + + + G+           
Sbjct: 219 VG-GDTFAASLAALAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALA 277

Query: 317 EF-------LRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG 351
           E        L SGK+  KP+I   +   +     A  +  + 
Sbjct: 278 EALAELFDLLASGKL--KPVIDRVYPLAEAPAAAAHLLLERR 317

Length = 326

>gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  152 bits (387), Expect = 2e-43
 Identities = 97/347 (27%), Positives = 151/347 (43%), Gaps = 36/347 (10%)

Query: 17  AAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFK-TMRCANFIVKKPMVIG 75
           A  L G   L+++    P   P +  VR+   GIC +D+  +K            P V G
Sbjct: 3   ALVLDGGLDLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP-------FPGVPG 55

Query: 76  HECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSL 135
           HE  GI+EE       L VG RV  E  I+CG C  C+ G Y  CP     G    +G+ 
Sbjct: 56  HEFVGIVEEGPEA--EL-VGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAF 112

Query: 136 AHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTL 195
           A  +  P +  + +PD V  E+    EPL+  +    +  + P   V ++G G +GL+  
Sbjct: 113 AEYLTLPLENLHVVPDLVPDEQAVFAEPLAAALEILEQVPITPGDKVAVLGDGKLGLLIA 172

Query: 196 LAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 255
                 G P +++     ++L++AR LG       +   ++ +++        G G DV 
Sbjct: 173 QVLALTG-PDVVLVGRHSEKLALARRLGV-----ETVLPDEAESE--------GGGFDVV 218

Query: 256 FDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRS---TW 312
            +  G    +  AL   RP G V L        +  LT A   E+ ++G     S    +
Sbjct: 219 VEATGSPSGLELALRLVRPRGTVVLKSTYAGPASFDLTKAVVNEITLVG-----SRCGPF 273

Query: 313 PLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 359
              +  LR G +DV PLIT  +     E  +AFE +A+ G A+KV+ 
Sbjct: 274 APALRLLRKGLVDVDPLITAVYPLE--EALEAFERAAEPG-ALKVLL 317

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score =  152 bits (385), Expect = 2e-43
 Identities = 91/333 (27%), Positives = 139/333 (41%), Gaps = 43/333 (12%)

Query: 33  LPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL 92
            PT GP  V VR++  G+CGSD+  F   R       +P   GHE  G +  +G  V+ L
Sbjct: 14  RPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGL 73

Query: 93  EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDN 152
            VGDRVA   G                             G+ A   +  A     LP  
Sbjct: 74  AVGDRVAGLSG-----------------------------GAFAEYDLADADHAVPLPSL 104

Query: 153 VSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 212
               +    EPL   ++  RR  +     V ++G+G IGL+ L  A A GA R+I  D  
Sbjct: 105 -LDGQAFPGEPLGCALNVFRRGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRR 163

Query: 213 VQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNAT 272
             RL++AR LGA E   V+ D E +   V ++    G+G DV  + VG    +  A    
Sbjct: 164 PARLALARELGATEV--VTDDSEAIVERVRELTG--GAGADVVIEAVGHQWPLDLAGELV 219

Query: 273 RPGGKVCLIGLAKTEM-TVALTPAAAREVDVIGI-FR----YRSTWPLCIEFLRSGKIDV 326
              G++ + G  +     V       + +D+I    R            ++ +  G++D+
Sbjct: 220 AERGRLVIFGYHQDGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDL 279

Query: 327 KPLITHRFGFTQKEIEDAFEISAQGGNA-IKVM 358
             L+TH F    +E+ DAFE + +  +  IK +
Sbjct: 280 GSLLTHEFPL--EELGDAFEAARRRPDGFIKGV 310

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

 Score =  152 bits (386), Expect = 5e-43
 Identities = 94/364 (25%), Positives = 153/364 (42%), Gaps = 52/364 (14%)

Query: 21  LGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAG 80
           L I+ +++ P   P     +V++++ A G+C +D+H              P+++GHE AG
Sbjct: 13  LSIEEIEVAP---P--KAGEVRIKVVATGVCHTDLHVIDGKLPTPL----PVILGHEGAG 63

Query: 81  IIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMR---------------- 124
           I+E +G  V +L+ GD+V    G  CG C  C     NLC + R                
Sbjct: 64  IVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFT 123

Query: 125 --------FFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAM--CEPLSVGVHAC-RR 173
                   F G+     + A   V       K+  +  LE+  +  C   S G  A    
Sbjct: 124 CKGKPIHHFLGT----STFAEYTVVSEISLAKIDPDAPLEKVCLIGCG-FSTGYGAAVNT 178

Query: 174 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTD 233
           A V P +   + G G +GL  ++  +A GA RII  D++  +   A+ LGA E       
Sbjct: 179 AKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQ 238

Query: 234 IEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI-GLAKTEMTVAL 292
            + +   V  +      G+D +F+ +G   T+  AL+ATR GG   ++ G+  +     L
Sbjct: 239 DKPI---VEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATL 295

Query: 293 TPAAARE-----VDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEI 347
            P            V G ++ + + P  +   R  K  +  LITH   F  +EI D F++
Sbjct: 296 DPNDLLTGRTIKGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPF--EEINDGFDL 353

Query: 348 SAQG 351
              G
Sbjct: 354 MRSG 357

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional

 Score =  148 bits (375), Expect = 1e-41
 Identities = 98/317 (30%), Positives = 160/317 (50%), Gaps = 31/317 (9%)

Query: 33  LPTL-GPQDVKVRIKALGICGSDVHH-FKTMRCANFIVKKPMVIGHECAGIIEEVGSEVK 90
           +P +    DV V++ + G+CGSD+   FK    A++    P+ +GHE +G +E VGS V 
Sbjct: 19  IPEIKHQDDVLVKVASSGLCGSDIPRIFK--NGAHYY---PITLGHEFSGYVEAVGSGVD 73

Query: 91  SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLP 150
            L  GD VA  P + C  C  C  G Y+LC +  F GS    G+  + VV    L + LP
Sbjct: 74  DLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNL-FALP 132

Query: 151 DNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITD 210
            ++ +E+GA  EP++VG+HA   A      NV+I+G+G IGL+ +  A A GA  +   D
Sbjct: 133 TDMPIEDGAFIEPITVGLHAFHLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAID 192

Query: 211 VDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD-----CVGFDKTM 265
           ++ ++L++A++LGA +T          +    +IQ+ +    ++ FD       G  +T+
Sbjct: 193 INSEKLALAKSLGAMQT------FNSREMSAPQIQSVLR---ELRFDQLILETAGVPQTV 243

Query: 266 STALNATRPGGKVCLIGLAKTEMTVALTPAAA---REVDVIGIF-RYRSTWP-----LCI 316
             A+    P  ++ L+G    ++ +          +E+ VIG +  Y S WP        
Sbjct: 244 ELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETAS 303

Query: 317 EFLRSGKIDVKPLITHR 333
             L   K+ ++PLI HR
Sbjct: 304 RLLTERKLSLEPLIAHR 320

Length = 347

>gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  147 bits (374), Expect = 2e-41
 Identities = 84/293 (28%), Positives = 125/293 (42%), Gaps = 57/293 (19%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
             L+   +    LGP DV ++I   G+C SD+H   T+R      K P+V GHE  GI+ 
Sbjct: 10  GKLEPFTFERRPLGPDDVDIKITYCGVCHSDLH---TLRNEWGPTKYPLVPGHEIVGIVV 66

Query: 84  EVGSEVKSLEVGDRVALEPGI-----SCGHCSLCKAGSYNLCPEMRFFGSP------PTN 132
            VGS+V   +VGDRV    G+     SCG C  CK+G    CP+     +        T 
Sbjct: 67  AVGSKVTKFKVGDRV----GVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQ 122

Query: 133 GSLAHKVVHPAKLCYKLPDNVSLEEGA--MC------EPLSVGVHACRRANVGPETNVMI 184
           G  A  +V   +  +K+P+ +     A  +C       PL       +R  VGP   V +
Sbjct: 123 GGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPL-------KRNGVGPGKRVGV 175

Query: 185 MGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-------ARNLGADETAKVSTDIEDV 237
           +G G +G + +  A+A GA        +V   S        A  LGADE    + D E +
Sbjct: 176 VGIGGLGHLAVKFAKALGA--------EVTAFSRSPSKKEDALKLGADEFI-ATKDPEAM 226

Query: 238 DTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTV 290
               G         +D+  D V     +   L+  +PGG + L+G  +  + V
Sbjct: 227 KKAAGS--------LDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPLPV 271

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

 Score =  147 bits (373), Expect = 4e-41
 Identities = 111/357 (31%), Positives = 160/357 (44%), Gaps = 41/357 (11%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
           + L I+   L   GP +V V+I A G+C SD+      R        PM +GHE AG++ 
Sbjct: 19  RPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRPR----PLPMALGHEAAGVVV 74

Query: 84  EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCP----------------EMRFFG 127
           EVG  V  LEVGD V L    SCGHC  C  G   LC                  +R  G
Sbjct: 75  EVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRG 134

Query: 128 SPPTN----GSLAHKVVHPAKLCYKLPDNVSLEEGAM--CEPLSVGVHAC-RRANVGPET 180
               +     + A   V   +   K+  +V LE  A+  C  L+ GV A    A V P  
Sbjct: 135 GEINHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLT-GVGAVVNTAGVRPGQ 193

Query: 181 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTD 240
           +V ++G G +GL  LL A A GA +++  D++  +L++AR LGA  TA V+    +    
Sbjct: 194 SVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGA--TATVNAGDPNA--- 248

Query: 241 VGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPA--AAR 298
           V +++   G G+D +F+  G    + TA   TR GG     GL   E  +++      A 
Sbjct: 249 VEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAE 308

Query: 299 EVDVIGIFR----YRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG 351
           E  + G +      R   P  +    SG++ V  L+THR      EI + F+  A G
Sbjct: 309 ERTLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPL--DEINEGFDRLAAG 363

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score =  145 bits (367), Expect = 1e-40
 Identities = 90/290 (31%), Positives = 129/290 (44%), Gaps = 29/290 (10%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
             L+ +   +P  GP +V ++I+A G+C +D+H            K P+V GHE  G + 
Sbjct: 10  GPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLH---AAEGDWGGSKYPLVPGHEIVGEVV 66

Query: 84  EVGSEVKSLEVGDRVALEPGI-----SCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHK 138
           EVG+ V+  +VGDRV    G+     SCG C  C+ G  NLC +    G   T G  A  
Sbjct: 67  EVGAGVEGRKVGDRV----GVGWLVGSCGRCEYCRRGLENLCQKAVNTGY-TTQGGYAEY 121

Query: 139 VVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLL 196
           +V  A+    LPD + L + A  +C  ++V   A R A   P   V ++G G +G + + 
Sbjct: 122 MVADAEYTVLLPDGLPLAQAAPLLCAGITV-YSALRDAGPRPGERVAVLGIGGLGHLAVQ 180

Query: 197 AARAFGAPRIIIT-DVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 255
            ARA G   + IT   D + L  AR LGADE                  Q A G G DV 
Sbjct: 181 YARAMGFETVAITRSPDKREL--ARKLGADEVV--------DSGAELDEQAAAG-GADVI 229

Query: 256 FDCVGFDKTMSTALNATRPGGKVCLIGL-AKTEMTVALTPAAAREVDVIG 304
              V        AL   R GG++ L+GL      +  + P   +   + G
Sbjct: 230 LVTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAG 279

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain

 Score =  136 bits (345), Expect = 7e-40
 Identities = 53/112 (47%), Positives = 69/112 (61%), Gaps = 4/112 (3%)

Query: 38  PQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDR 97
           P +V VR+KA GICGSD+H ++        VK P+++GHE AGI+EEVG  V  L+VGDR
Sbjct: 1   PGEVLVRVKAAGICGSDLHIYRG---EPPPVKLPLILGHEGAGIVEEVGPGVTGLKVGDR 57

Query: 98  VALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKL 149
           V + P I CG C+ C+ G  NLCP  +F G    +G  A  VV PA+    L
Sbjct: 58  VVVYPLIPCGKCAACREGRENLCPNGKFLGV-HLDGGFAEYVVVPARNLVPL 108

This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score =  142 bits (360), Expect = 2e-39
 Identities = 97/332 (29%), Positives = 152/332 (45%), Gaps = 22/332 (6%)

Query: 22  GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGI 81
           G + L+      P  GP +V VR+KA  +   D+   + M      +  P ++G + AG+
Sbjct: 11  GPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIK--LPLPHILGSDGAGV 68

Query: 82  IEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVH 141
           +E VG  V +++ G RV + PGISCG C  C AG  NLC +    G    +G  A  V  
Sbjct: 69  VEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGE-HVDGGYAEYVAV 127

Query: 142 PAKLCYKLPDNVSLEEGAMCEPLSVGV--HACR-RANVGPETNVMIMG-SGPIGLVTLLA 197
           PA+    +PDN+S EE A   PL+     H    RA + P   V++ G    +G   +  
Sbjct: 128 PARNLLPIPDNLSFEEAA-AAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQI 186

Query: 198 ARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 257
           A+ FGA  +I T     +L  A+ LGAD    +    ED   +V ++      G+DV  +
Sbjct: 187 AKLFGA-TVIATAGSEDKLERAKELGADYV--IDYRKEDFVREVRELTG--KRGVDVVVE 241

Query: 258 CVGFDKTMSTALNATRPGGKVCLIGLAKT--EMTVALTPAAAREVDVIGIFR-YRSTWPL 314
            VG   T   +L +   GG++   G A T  E  + L     R++ ++G     ++    
Sbjct: 242 HVG-AATWEKSLKSLARGGRLVTCG-ATTGYEAPIDLRHVFWRQLSILGSTMGTKAELDE 299

Query: 315 CIEFLRSGKIDVKPLITHRFGFTQKEIEDAFE 346
            +  +  GK+  KP+I   F    +E  +A  
Sbjct: 300 ALRLVFRGKL--KPVIDSVFPL--EEAAEAHR 327

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|176247 cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like

 Score =  142 bits (359), Expect = 3e-39
 Identities = 85/256 (33%), Positives = 126/256 (49%), Gaps = 21/256 (8%)

Query: 38  PQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDR 97
           P D  +R+ A  +CGSD+  ++ +         P  IGHE  G++EEVGSEV S++ GD 
Sbjct: 25  PTDAVIRVVATCVCGSDLWPYRGVSPTRA----PAPIGHEFVGVVEEVGSEVTSVKPGDF 80

Query: 98  VALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNG-SLAHKVVHPAKLCYKLPDNVSLE 156
           V     IS G C  C+AG    C    F+G+    G     +V        K+P + S +
Sbjct: 81  VIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKVPGSPSDD 140

Query: 157 EG------AMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITD 210
           E       A+ + +  G HA   A V P + V+++G G +GL  +LAA+  GA RII   
Sbjct: 141 EDLLPSLLALSDVMGTGHHAAVSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMS 200

Query: 211 VDVQRLSIARNLGADETAKVSTDI--EDVDTDVGKIQNAM-GSGIDVSFDCVGFDKTMST 267
               R ++AR  GA       TDI  E  +  V +++    G G D   +CVG  ++M  
Sbjct: 201 RHEDRQALAREFGA-------TDIVAERGEEAVARVRELTGGVGADAVLECVGTQESMEQ 253

Query: 268 ALNATRPGGKVCLIGL 283
           A+   RPGG+V  +G+
Sbjct: 254 AIAIARPGGRVGYVGV 269

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

 Score =  139 bits (353), Expect = 4e-38
 Identities = 91/288 (31%), Positives = 131/288 (45%), Gaps = 38/288 (13%)

Query: 38  PQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDR 97
           P D  VRI    ICGSD+H    M       +  +V+GHE  G +EEVGS V+SL+VGDR
Sbjct: 25  PTDAIVRITTTAICGSDLH----MYRGRTGAEPGLVLGHEAMGEVEEVGSAVESLKVGDR 80

Query: 98  VALEPGISCGHCSLCKAGSYNLCPEM---------RFFGSPPTNGSLAHKVVHP-AKL-C 146
           V +   ++CG C  CK G   +C  +          +    P  G  A  +  P A    
Sbjct: 81  VVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNL 140

Query: 147 YKLPDNVSLEEGAMCEPLS----VGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFG 202
            KLPD    +E      LS     G H    A V P   V + G+GP+GL+   +A   G
Sbjct: 141 LKLPDRDGAKEKDDYLMLSDIFPTGWHGLELAGVQPGDTVAVFGAGPVGLMAAYSAILRG 200

Query: 203 APRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTD-VGKIQNAMGSGIDVSFDCVGF 261
           A R+ + D   +RL +A ++GA         I+  D D V +I      G+D + DCVG+
Sbjct: 201 ASRVYVVDHVPERLDLAESIGA-------IPIDFSDGDPVEQILGLEPGGVDRAVDCVGY 253

Query: 262 -----------DKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAR 298
                      +  ++  +  TRPGG + ++G+   E   A   AA +
Sbjct: 254 EARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQ 301

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  134 bits (339), Expect = 3e-36
 Identities = 98/346 (28%), Positives = 153/346 (44%), Gaps = 38/346 (10%)

Query: 17  AAWLL--GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVI 74
           AA +   G K  +++   +P  GP +V V+++A G+C +D  H           K P++ 
Sbjct: 3   AAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTD-LHAALGD-WPVKPKLPLIG 60

Query: 75  GHECAGIIEEVGSEVKSLEVGDRVALEPGI-----SCGHCSLCKAGSYNLCPEMRFFGSP 129
           GHE AG++  VG  V  L+VGDRV    G+     +CG C  C+ G   LCP  +  G  
Sbjct: 61  GHEGAGVVVAVGPGVSGLKVGDRV----GVKWLYDACGKCEYCRTGDETLCPNQKNSGY- 115

Query: 130 PTNGSLAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMGS 187
             +G+ A   +  A+    +PD +S E+ A  +C  ++V   A ++A + P   V+I G+
Sbjct: 116 TVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTV-YKALKKAGLKPGDWVVISGA 174

Query: 188 GPIGLVTLLA---ARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI 244
           G  G +  L    A+A G  R+I  DV  ++L +A+ LGAD    V     D    V ++
Sbjct: 175 G--GGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAF--VDFKKSDDVEAVKEL 229

Query: 245 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPA-AAREVDVI 303
               G G                AL+  RPGG +  +GL               R + ++
Sbjct: 230 --TGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIV 287

Query: 304 GIFRYRSTW---PLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFE 346
           G      T       +EF   GK  VKP I        +++ + FE
Sbjct: 288 G--SLVGTRQDLQEALEFAARGK--VKPHIQ-VVPL--EDLNEVFE 326

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase

 Score =  133 bits (336), Expect = 1e-35
 Identities = 96/355 (27%), Positives = 149/355 (41%), Gaps = 52/355 (14%)

Query: 38  PQDVKVRIKAL--GICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVG 95
           P+  +VRIK L   +C +D+   +  +   F    P+++GHE AGI+E VG  V +L+ G
Sbjct: 25  PKANEVRIKMLATSVCHTDILAIEGFKATLF----PVILGHEGAGIVESVGEGVTNLKPG 80

Query: 96  DRVALEPGIS-CGHCSLCKAGSYNLCPEMRFFGS---PP----------------TNGSL 135
           D+V +   I  CG CS C++G  NLC + R   S   P                    + 
Sbjct: 81  DKV-IPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTF 139

Query: 136 AHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVH-----ACRRANVGPETNVMIMGSGPI 190
           +   V       K+     LE   +   L  G       A   A V P + V + G G +
Sbjct: 140 SQYTVVDENYVAKIDPAAPLEHVCL---LGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAV 196

Query: 191 GLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE---TAKVSTDIEDVDTDVGKIQNA 247
           GL  ++ A+  GA RII  D++  +   A+  GA +          + +V      I+  
Sbjct: 197 GLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKDSDKPVSEV------IREM 250

Query: 248 MGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEM----TVALTPAAAREVDV 302
            G G+D SF+C G    M+ AL +T+ G G   ++G+            L      +   
Sbjct: 251 TGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLILGRTWKGSF 310

Query: 303 IGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKV 357
            G F+ RS  P  +    + K D+  LITH   F   EI   F++  + G  I+ 
Sbjct: 311 FGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPFE--EINKGFDL-MKSGECIRT 362

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score =  124 bits (313), Expect = 3e-33
 Identities = 69/314 (21%), Positives = 110/314 (35%), Gaps = 60/314 (19%)

Query: 60  TMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNL 119
            +      +  P+  G+   G + EVGS V   + GDRV                     
Sbjct: 10  GLSTGTEKLPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVF-------------------- 49

Query: 120 CPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPE 179
                        G  A +VV PA L   LPD +  E  A+    +  ++  R A     
Sbjct: 50  -----------CFGPHAERVVVPANLLVPLPDGLPPERAALTALAATALNGVRDAEPRLG 98

Query: 180 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDT 239
             V ++G G +GL+    A+A GA  ++  D D  R  +A  LG  +     T  E    
Sbjct: 99  ERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPADPVAADTADEI--- 155

Query: 240 DVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAARE 299
                    G G DV  +  G    + TAL   R  G+V L+G    +  +       + 
Sbjct: 156 --------GGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLKPLLLGEEFHFKR 207

Query: 300 VDVIG---IFRYRSTWP----------LCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFE 346
           + +         R   P            ++ L  G+++   LITHR  F   +  +A+ 
Sbjct: 208 LPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLE--ALITHRVPFE--DAPEAYR 263

Query: 347 -ISAQGGNAIKVMF 359
            +       +KV+ 
Sbjct: 264 LLFEDPPECLKVVL 277

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|176260 cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases

 Score =  123 bits (310), Expect = 6e-32
 Identities = 100/356 (28%), Positives = 151/356 (42%), Gaps = 70/356 (19%)

Query: 41  VKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVAL 100
           V+++I A G+C +D +   T+  A+     P+++GHE AGI+E VG  V S++ GD V  
Sbjct: 30  VRIKILATGVCHTDAY---TLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKPGDHVIP 86

Query: 101 EPGISCGHCSLCKAGSYNLCPEMRFF---GSPPTNGS--------LAH----------KV 139
                CG C  CK+G  NLC ++R     G  P   S        + H           V
Sbjct: 87  LYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTV 146

Query: 140 VHPAKLCYKLPDNVSLEEGAMCEPLSVGVH-----ACRRANVGPETNVMIMGSGPIGLVT 194
           V    +  K+     L++  +   L  GV          A V P + V + G G +GL  
Sbjct: 147 VAEISVA-KINPEAPLDKVCL---LGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAV 202

Query: 195 LLAARAFGAPRIIITDVDVQRLSIARNLGADET---AKVSTDIEDVDTDVGKIQNAMGSG 251
           +  A+A GA RII  D++  +  +A+  GA +          I+ V  ++         G
Sbjct: 203 IQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKDHDKPIQQVLVEMTD------GG 256

Query: 252 IDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTPAAAREVDV-------- 302
           +D +F+C+G  K M  AL A   G G   +IG+A          AA +E+          
Sbjct: 257 VDYTFECIGNVKVMRAALEACHKGWGTSVIIGVA----------AAGQEISTRPFQLVTG 306

Query: 303 -------IGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG 351
                   G ++ RS  P  +E    GKI V   ITH       EI +AF++   G
Sbjct: 307 RVWKGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPL--DEINEAFDLMHAG 360

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 368

>gnl|CDD|176261 cd08301, alcohol_DH_plants, Plant alcohol dehydrogenase

 Score =  118 bits (297), Expect = 3e-30
 Identities = 99/355 (27%), Positives = 149/355 (41%), Gaps = 57/355 (16%)

Query: 38  PQDVKVRIKAL--GICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVG 95
           PQ ++VRIK L   +C +DV+ ++           P ++GHE AGI+E VG  V  L+ G
Sbjct: 25  PQAMEVRIKILHTSLCHTDVYFWEA---KGQTPLFPRILGHEAAGIVESVGEGVTDLKPG 81

Query: 96  DRVALEPGISCGHCSLCKAGSYNLCPEMRF---FGSPPTNGS---------LAH------ 137
           D V       C  C  CK+   N+C  +R     G    +G          + H      
Sbjct: 82  DHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTST 141

Query: 138 ----KVVHP---AKLCYKLP-DNVSLEEGAMCEPLSVGVH-----ACRRANVGPETNVMI 184
                VVH    AK+  + P D V L        LS GV      A   A V   + V I
Sbjct: 142 FSEYTVVHVGCVAKINPEAPLDKVCL--------LSCGVSTGLGAAWNVAKVKKGSTVAI 193

Query: 185 MGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI 244
            G G +GL     AR  GA RII  D++  +   A+  G  E      + +D D  V ++
Sbjct: 194 FGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEF----VNPKDHDKPVQEV 249

Query: 245 QNAM-GSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTPA---AARE 299
              M G G+D SF+C G    M +A      G G   L+G+   +   +  P      R 
Sbjct: 250 IAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLNGRT 309

Query: 300 V--DVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGG 352
           +   + G ++ ++  P  +E     +++++  ITH   F   EI  AF++  +G 
Sbjct: 310 LKGTLFGGYKPKTDLPNLVEKYMKKELELEKFITHELPF--SEINKAFDLLLKGE 362

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 369

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score =  117 bits (294), Expect = 4e-30
 Identities = 81/267 (30%), Positives = 122/267 (45%), Gaps = 29/267 (10%)

Query: 16  MAAWLL---GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPM 72
           M A +    GI+ LK++    P  GP +V +R+K  G+   D          N +  KPM
Sbjct: 1   MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVD------YNVINAVKVKPM 54

Query: 73  --VIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPP 130
             + G E AG++EEVG  VK ++ GDRV +   +  G C +C +G+  LC      G   
Sbjct: 55  PHIPGAEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGV-V 113

Query: 131 TNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGV----HACRRANVGPETNVMIMG 186
           +NG  A  +V P K  +K+PD++S E  A    L V      HA + A +GP   V++ G
Sbjct: 114 SNGGYAEYIVVPEKNLFKIPDSISDELAA---SLPVAALTAYHALKTAGLGPGETVVVFG 170

Query: 187 -SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK-- 243
            SG  G+  +  A+  GA  I ++     R    +  GADE        E V        
Sbjct: 171 ASGNTGIFAVQLAKMMGAEVIAVS-----RKDWLKEFGADEVVDYDEVEEKVKEITKMAD 225

Query: 244 -IQNAMGSGI-DVSFDCVGFDKTMSTA 268
            + N++GS   D+S   +G    + T 
Sbjct: 226 VVINSLGSSFWDLSLSVLGRGGRLVTF 252

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase

 Score =  117 bits (294), Expect = 7e-30
 Identities = 99/348 (28%), Positives = 150/348 (43%), Gaps = 48/348 (13%)

Query: 33  LPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL 92
           +P  GP +V V I+A G+C +D+H+ +      F    P ++GHE AG++E VG  V  +
Sbjct: 21  VPDPGPGEVIVDIQACGVCHTDLHYREGGINDEF----PFLLGHEAAGVVEAVGEGVTDV 76

Query: 93  EVGDRVALEPGISCGHCSLCKAG-------SYNLCPEMRFF-GSPPTN----GSLAHKVV 140
             GD V L     CG C  CK G       ++N   +M    G+  +     G+ A K +
Sbjct: 77  APGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTL 136

Query: 141 HPAKLCYKL-PDNVSLEEGAMCEPLSVGVH-----ACRRANVGPETNVMIMGSGPIGLVT 194
             A  C K+ P      + A    L  GV      A     V    +V ++G G +G   
Sbjct: 137 VHAGQCTKVDPA----ADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAA 192

Query: 195 LLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV 254
           +  A   GA +II  D+D ++L  AR  GA  T   S    D    +  +    G G DV
Sbjct: 193 IAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGT--DPVEAIRALTG--GFGADV 248

Query: 255 SFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGI-FRYRSTW- 312
             D VG  +T   A  A    G V L+G+   +MT+ L P     +DV G     +S+W 
Sbjct: 249 VIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLEL-PL----LDVFGRGGALKSSWY 303

Query: 313 ---------PLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG 351
                    P+ ++    G++ +   +T R G     +E+AF+    G
Sbjct: 304 GDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLDD--VEEAFDKMHAG 349

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358

>gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  113 bits (285), Expect = 9e-29
 Identities = 87/290 (30%), Positives = 129/290 (44%), Gaps = 45/290 (15%)

Query: 16  MAAWLL-GIKTLKIQPYHL-----PTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIV- 68
           M A +L     ++  P  L     P  GP +V ++++A G+C +D+H          IV 
Sbjct: 1   MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLH----------IVE 50

Query: 69  ------KKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEP-GISCGHCSLCKAGSYNLCP 121
                 K P++ GHE  G +E VG  V    VGDRV +   G +CG C  C++G  NLC 
Sbjct: 51  GDLPPPKLPLIPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCD 110

Query: 122 EMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPE 179
             RF G    +G  A  +V   +  Y +P++   EE A  +C  + +G  A + A + P 
Sbjct: 111 NARFTGY-TVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGI-IGYRALKLAGLKPG 168

Query: 180 TNVMIMGSGPIGLVTLLAARAFGAPRIIIT-DVDVQRLSIARNLGADETAKVSTDIEDVD 238
             + + G G    + L  AR  GA     T   + Q L  AR LGAD     S D+    
Sbjct: 169 QRLGLYGFGASAHLALQIARYQGAEVFAFTRSGEHQEL--ARELGADWAG-DSDDLPPEP 225

Query: 239 TDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM 288
            D         + I   F  VG    +  AL A + GG+V L G+  +++
Sbjct: 226 LD---------AAII--FAPVG--ALVPAALRAVKKGGRVVLAGIHMSDI 262

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329

>gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases

 Score =  113 bits (286), Expect = 1e-28
 Identities = 93/349 (26%), Positives = 145/349 (41%), Gaps = 49/349 (14%)

Query: 38  PQDVKVRIK--ALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVG 95
           P+  +VRIK  A GIC SD H          +   P+++GHE AGI+E VG  V +++ G
Sbjct: 30  PKAHEVRIKIVATGICRSDDHVVSG----KLVTPFPVILGHEAAGIVESVGEGVTTVKPG 85

Query: 96  DRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT----------NGSLAHK------- 138
           D+V       CG C  C     NLC +                    G   H        
Sbjct: 86  DKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTF 145

Query: 139 ----VVHPAKLCYKLPDNVSLEEGAM--CEPLSVGV-HACRRANVGPETNVMIMGSGPIG 191
               VV    +  K+     LE+  +  C   S G   A   A V P +   + G G +G
Sbjct: 146 SEYTVVDEIAVA-KIDAAAPLEKVCLIGCG-FSTGYGAAVNTAKVTPGSTCAVFGLGGVG 203

Query: 192 LVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAK---VSTDIEDVDTDVGKIQNAM 248
           L  ++  +A GA RII  D++  + + A+ LGA E          I++V      +    
Sbjct: 204 LSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINPQDYKKPIQEV------LTEMT 257

Query: 249 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI-GLAKTEMTVALTPA---AAREVD--V 302
             G+D SF+ +G   TM  AL +   G  V +I G+  +   +++ P      R     V
Sbjct: 258 DGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPMLLLTGRTWKGAV 317

Query: 303 IGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG 351
            G ++ + + P  +    + K ++ PLITH   F +  I + F++   G
Sbjct: 318 FGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEK--INEGFDLLRSG 364

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373

>gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

 Score =  111 bits (278), Expect = 1e-27
 Identities = 103/372 (27%), Positives = 161/372 (43%), Gaps = 45/372 (12%)

Query: 12  KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKP 71
           K++   AW  G + LKI+   +      +V VRI A G+C +D     T+  A+     P
Sbjct: 1   KSRAAVAWAAG-QPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAF---TLSGADPEGVFP 56

Query: 72  MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMR------- 124
           +++GHE AGI+E VG  V S++VGD V       CG C  C +G  NLC  +R       
Sbjct: 57  VILGHEGAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGL 116

Query: 125 -------FF--GSPPTN----GSLAHKVVHPAKLCYKLPDNVSLEEGAM--CEPLSVGVH 169
                  F   G P  +     + +   V P     K+     LEE  +  C  ++ G+ 
Sbjct: 117 MPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCG-VTTGIG 175

Query: 170 AC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE-- 226
           A    A V     V + G G IGL  +  AR   A RII  D++  +  +A+ LGA +  
Sbjct: 176 AVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCV 235

Query: 227 -TAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLA 284
                   I++V  ++         G+D SF+C+G    M  AL     G G+  +IG+A
Sbjct: 236 NPNDYDKPIQEVIVEITD------GGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVA 289

Query: 285 KTEMTVALTP---AAAR--EVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQK 339
                ++  P      R       G  + R+  P  +E    G+I +   +TH      +
Sbjct: 290 GAGQEISTRPFQLVTGRVWRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPL--E 347

Query: 340 EIEDAFEISAQG 351
           +I +AF++  +G
Sbjct: 348 DINEAFDLMHEG 359

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score =  109 bits (275), Expect = 2e-27
 Identities = 90/354 (25%), Positives = 141/354 (39%), Gaps = 69/354 (19%)

Query: 16  MAAWLL----GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKP 71
           M A  +    G + L++     P  GP +V V++ A G+   D+   + +  A F +  P
Sbjct: 1   MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLP 60

Query: 72  MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT 131
           ++ GH+ AG++  VG  V   +VGD V                           FG  P 
Sbjct: 61  LIPGHDVAGVVVAVGPGVTGFKVGDEV---------------------------FGMTPF 93

Query: 132 --NGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSV-----GVHACRRANVGPETNVMI 184
              G+ A  VV PA      P N+S EE A   PL+       +       +     V+I
Sbjct: 94  TRGGAYAEYVVVPADELALKPANLSFEEAAAL-PLAGLTAWQALF--ELGGLKAGQTVLI 150

Query: 185 MG-SGPIGLVTLLAARAFGAPRIIIT--DVDVQRLSIARNLGADETAKVSTDIEDVDTDV 241
            G +G +G   +  A+A GA R+I T    +   L   R+LGADE          +D   
Sbjct: 151 HGAAGGVGSFAVQLAKARGA-RVIATASAANADFL---RSLGADEV---------IDYTK 197

Query: 242 GKIQNA-MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREV 300
           G  + A    G+D   D VG + T++ +L   +PGG++  I         A   A  R V
Sbjct: 198 GDFERAAAPGGVDAVLDTVGGE-TLARSLALVKPGGRLVSI----AGPPPAEQAAKRRGV 252

Query: 301 DVIGIFRYRSTWPL--CIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGG 352
               +F       L    E + +GK+  +P++   F    ++  +A E    G 
Sbjct: 253 RAGFVFVEPDGEQLAELAELVEAGKL--RPVVDRVFPL--EDAAEAHERLESGH 302

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score =  110 bits (276), Expect = 2e-27
 Identities = 76/277 (27%), Positives = 118/277 (42%), Gaps = 35/277 (12%)

Query: 17  AAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIG 75
           A  L G K   +I+    P  G  +V +++   G+C  D      ++     +K P+++G
Sbjct: 3   AVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRD---LLQLQGFYPRMKYPVILG 59

Query: 76  HECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSL 135
           HE  G +EEVG  VK  + GDRVA       G C  C++G    C     +G    +G  
Sbjct: 60  HEVVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGE-ELDGFF 118

Query: 136 AHKVVHPAKLCYKLPDNVSLEEGAMCEP--LSVGVHACRRANVGPETNVMIMG-SGPIGL 192
           A           K+P NVS +EGA+  P    +     RRA V     V++ G  G +G+
Sbjct: 119 AEYAKVKVTSLVKVPPNVS-DEGAVIVPCVTGMVYRGLRRAGVKKGETVLVTGAGGGVGI 177

Query: 193 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIED--VDT-----DVGKIQ 245
             +  A+A GA  I +T              ++  AK+ +   D  +       +V KI 
Sbjct: 178 HAIQVAKALGAKVIAVTS-------------SESKAKIVSKYADYVIVGSKFSEEVKKI- 223

Query: 246 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG 282
                G D+  + VG   T+  +L +   GGK+  IG
Sbjct: 224 ----GGADIVIETVGTP-TLEESLRSLNMGGKIIQIG 255

Length = 334

>gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family

 Score =  107 bits (269), Expect = 3e-26
 Identities = 93/351 (26%), Positives = 152/351 (43%), Gaps = 53/351 (15%)

Query: 40  DVKVRIKALGICGSDVHHFKT--MRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDR 97
           +V V++ A G+C SD  H  T  +    +    P++ GHE AG++ +VG  V  ++ GD 
Sbjct: 28  EVLVKLVASGLCHSD-EHLVTGDLPMPRY----PILGGHEGAGVVTKVGPGVTGVKPGDH 82

Query: 98  VALEPGISCGHCSLCKAGSYNLCPE--MRFFGSPPTNGSLAHK----------------- 138
           V L    +CG C  C  G  NLC        GS  ++G+                     
Sbjct: 83  VVLSFIPACGRCRWCSTGLQNLCDLGAALLTGSQISDGTYRFHADGQDVGQMCLLGTFSE 142

Query: 139 --VVHPAKLCYKLPDNVSLEEGAMCEPLSVGV-----HACRRANVGPETNVMIMGSGPIG 191
             VV  A    K+ D++ L++  +   +  GV      A   A+V P   V++MG G +G
Sbjct: 143 YTVVPEAS-VVKIDDDIPLDKACL---VGCGVPTGWGSAVNIADVRPGDTVVVMGIGGVG 198

Query: 192 LVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG 251
           +  +  A   GA ++I  D    +   A   GA         +E+    V ++ N  G G
Sbjct: 199 INAVQGAAVAGARKVIAVDPVEFKREQALKFGATHAF---ASMEEAVQLVRELTN--GQG 253

Query: 252 IDVSFDCVGFDK--TMSTALNATRPGGKVCLIGLA---KTEMTVALTPAAAREVDVIG-I 305
            D +   VG      ++ AL+ATR GG+V + GL      ++ V L      + ++ G +
Sbjct: 254 ADKTIITVGEVDGEHIAEALSATRKGGRVVVTGLGPMADVDVKVNLFELTLLQKELQGTL 313

Query: 306 F---RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGN 353
           F     R+  P  +E  R+GK+ +  LIT    +T  +I + ++    G N
Sbjct: 314 FGGANPRADIPRLLELYRAGKLKLDELITRT--YTLDQINEGYQDMLDGKN 362

This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369

>gnl|CDD|178341 PLN02740, PLN02740, Alcohol dehydrogenase-like

 Score =  106 bits (267), Expect = 6e-26
 Identities = 103/353 (29%), Positives = 154/353 (43%), Gaps = 52/353 (14%)

Query: 38  PQDVKVRIKAL--GICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVG 95
           PQ ++VRIK L   IC +D+  +K    A      P ++GHE AGI+E VG  V+ L+ G
Sbjct: 33  PQKMEVRIKILYTSICHTDLSAWKGENEAQ--RAYPRILGHEAAGIVESVGEGVEDLKAG 90

Query: 96  DRVALEPGISCGHCSLCKAGSYNLCPEMRF--------------FGSPPTNGSLAH---- 137
           D V       CG C  CK    NLC   R               F +      + H    
Sbjct: 91  DHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNT 150

Query: 138 ------KVVHPAKLC-YKLPDNVSLEEGAMCEPLSVGVH-----ACRRANVGPETNVMIM 185
                  V+  A  C  K+  N  L++  M   LS GV      A   ANV   ++V I 
Sbjct: 151 STFTEYTVLDSA--CVVKIDPNAPLKK--MSL-LSCGVSTGVGAAWNTANVQAGSSVAIF 205

Query: 186 GSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK-I 244
           G G +GL     ARA GA +II  D++ ++    + +G  +      + +D D  V + I
Sbjct: 206 GLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITDF----INPKDSDKPVHERI 261

Query: 245 QNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTPAA---AREV 300
           +   G G+D SF+C G  + +  A  +T  G G   L+G+  T   + L P      R +
Sbjct: 262 REMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRSI 321

Query: 301 --DVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG 351
              V G F+ +S  P   +    G +++   ITH   F  ++I +AF++   G
Sbjct: 322 TGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPF--EKINEAFQLLEDG 372

Length = 381

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score =  105 bits (265), Expect = 6e-26
 Identities = 81/276 (29%), Positives = 117/276 (42%), Gaps = 65/276 (23%)

Query: 22  GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFI----------VKKP 71
           G + L+ +   +P  GP +V VR  A+G+              NFI          +  P
Sbjct: 10  GPEVLEYEDVPVPEPGPGEVLVRNTAIGV--------------NFIDTYFRSGLYPLPLP 55

Query: 72  MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT 131
            V+G E AG++E VG  V   +VGDRVA                          +  PP 
Sbjct: 56  FVLGVEGAGVVEAVGPGVTGFKVGDRVA--------------------------YAGPP- 88

Query: 132 NGSLAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMG-SG 188
            G+ A   V PA    KLPD +S E  A  + + L+          V P   V++   +G
Sbjct: 89  -GAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAG 147

Query: 189 PIGLVTLLA--ARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 246
            +GL  LL   A+A GA  +I T    ++  +AR  GAD    ++   ED    V +I  
Sbjct: 148 GVGL--LLTQWAKALGA-TVIGTVSSEEKAELARAAGADHV--INYRDEDFVERVREITG 202

Query: 247 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG 282
             G G+DV +D VG D T   +L++ RP G +   G
Sbjct: 203 --GRGVDVVYDGVGKD-TFEGSLDSLRPRGTLVSFG 235

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  105 bits (264), Expect = 1e-25
 Identities = 99/359 (27%), Positives = 153/359 (42%), Gaps = 44/359 (12%)

Query: 16  MAAWLL----GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCA--NFIVK 69
           M AW L    G+  LK+    +P  GP +V VR+ A+    S  +    +        VK
Sbjct: 1   MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAV----SLNYRDLLILNGRYPPPVK 56

Query: 70  KPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP 129
            P++   + AG +  VG  V   +VGDRV   P            G      +       
Sbjct: 57  DPLIPLSDGAGEVVAVGEGVTRFKVGDRVV--PTFFPNW----LDGPPTA-EDEASALGG 109

Query: 130 PTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHA----CRRANVGPETNVMIM 185
           P +G LA  VV P +   + PD++S EE A   P + G+ A         + P   V++ 
Sbjct: 110 PIDGVLAEYVVLPEEGLVRAPDHLSFEEAA-TLPCA-GLTAWNALFGLGPLKPGDTVLVQ 167

Query: 186 GSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ 245
           G+G + L  L  A+A GA R+I T    ++L  A+ LGAD      T   D   +V K+ 
Sbjct: 168 GTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINYRTT-PDWGEEVLKLT 225

Query: 246 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG-LAKTEMTVALTPAAAREVDVIG 304
              G G+D   + VG   T++ ++ A  PGG + LIG L+  E  V L P   +   + G
Sbjct: 226 G--GRGVDHVVE-VGGPGTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRG 282

Query: 305 IF-----RYRSTWPLCIEFLRS-GKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKV 357
           I      ++           R+     ++P+I   F F  +E ++A+     G +  KV
Sbjct: 283 IAVGSRAQFE-------AMNRAIEAHRIRPVIDRVFPF--EEAKEAYRYLESGSHFGKV 332

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score =  104 bits (261), Expect = 2e-25
 Identities = 93/350 (26%), Positives = 146/350 (41%), Gaps = 75/350 (21%)

Query: 34  PTLGPQD-VKVRIKALGICGSDV------HHFKTMRCANFIVKKPMVIGHECAGIIEEVG 86
           P  G    V++R++A G+   D+      +  K           P V G E AG++E VG
Sbjct: 22  PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVK--------PPLPFVPGSEVAGVVEAVG 73

Query: 87  SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLC 146
             V   +VGDRV                                  G  A +VV PA   
Sbjct: 74  EGVTGFKVGDRV---------------------------VALTGQ-GGFAEEVVVPAAAV 105

Query: 147 YKLPDNVSLEEGAMCEPLSVGV--HAC-RRANVGPETNVMIMG-SGPIGLVTLLAARAFG 202
           + LPD +S EE A   P++ G   HA  RRA + P   V+++G +G +GL  +  A+A G
Sbjct: 106 FPLPDGLSFEEAA-ALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALG 164

Query: 203 APRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG-- 260
           A R+I      ++L++AR LGAD    +     D+   V  +    G G+DV +D VG  
Sbjct: 165 A-RVIAAASSEEKLALARALGADHV--IDYRDPDLRERVKALTG--GRGVDVVYDPVGGD 219

Query: 261 -FDKTMSTALNATRPGGKVCLIGLAKTEM-TVALTPAAAREVDVIGIF----------RY 308
            F+     +L +   GG++ +IG A  E+  +       + + V+G++            
Sbjct: 220 VFEA----SLRSLAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELL 275

Query: 309 RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 358
           R+      + L  GKI  +P ++  F   Q    +A    A      KV+
Sbjct: 276 RANLAELFDLLAEGKI--RPHVSAVFPLEQ--AAEALRALADRKATGKVV 321

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score =  104 bits (261), Expect = 3e-25
 Identities = 84/377 (22%), Positives = 138/377 (36%), Gaps = 72/377 (19%)

Query: 17  AAWLLGIKT--LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVI 74
           AA L G     L +    +P  GP +V V++KA+ +   D  H        FI   P ++
Sbjct: 3   AAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQD----YGFIPSYPAIL 58

Query: 75  GHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGS 134
           G + AG + EVGS V   +VGDRV        G                    + P NG+
Sbjct: 59  GCDFAGTVVEVGSGVTRFKVGDRV-------AGFV-------------HGGNPNDPRNGA 98

Query: 135 LAHKVVHPAKLCYKLPDNVSLEEGA------------MCEPLSVGVHACRRANVGPETNV 182
               VV  A L  K+PDN+S EE A            + + L + +   + +       V
Sbjct: 99  FQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPV 158

Query: 183 MIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVD--- 238
           +I G S  +G + +  A+  G    +IT    +   + ++LGAD            D   
Sbjct: 159 LIWGGSSSVGTLAIQLAKLAGYK--VITTASPKNFDLVKSLGADAV---------FDYHD 207

Query: 239 -TDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA------------K 285
              V  I+ A G  +  + DC+   ++      A    G   L+ L             K
Sbjct: 208 PDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEETEPRKGVK 267

Query: 286 TEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAF 345
            +  +  T       D      +    P   E L  GK+   P+     G   + +++  
Sbjct: 268 VKFVLGYTVFGEIPEDREFGEVFWKYLP---ELLEEGKLKPHPVRVVEGGL--EGVQEGL 322

Query: 346 EISAQGG-NAIKVMFNL 361
           ++  +G  +  K++  L
Sbjct: 323 DLLRKGKVSGEKLVVRL 339

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score =  103 bits (259), Expect = 3e-25
 Identities = 95/342 (27%), Positives = 139/342 (40%), Gaps = 61/342 (17%)

Query: 34  PTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKK--PMVIGHECAGIIEEVGSEVKS 91
           PT GP +V VR+ A G+   D +    +R   +      P V G + AG++E VG  V  
Sbjct: 23  PTPGPGEVLVRVHASGVNPVDTY----IRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDG 78

Query: 92  LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPD 151
           L+VGDRV L         +L                     G+ A  VV PA     LPD
Sbjct: 79  LKVGDRVWL--------TNLGWGRRQ---------------GTAAEYVVVPADQLVPLPD 115

Query: 152 NVSLEEGAMCEPLSVGVHAC-------RRANVGPETNVMIMG-SGPIGLVTLLAARAFGA 203
            VS E+GA     ++G+ A         RA       V++ G SG +G   +  AR  GA
Sbjct: 116 GVSFEQGA-----ALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA 170

Query: 204 PRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM-GSGIDVSFDCVGFD 262
            R+I T    +   + R  GAD         ED+     +I  A  G G+DV  + V  +
Sbjct: 171 -RVIATASSAEGAELVRQAGADAVFNYRA--EDL---ADRILAATAGQGVDVIIE-VLAN 223

Query: 263 KTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRST---WPLCIE-- 317
             ++  L+   PGG++ + G      T+ + P  A+E  + G+  Y +T        E  
Sbjct: 224 VNLAKDLDVLAPGGRIVVYGSGGLRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAI 283

Query: 318 --FLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKV 357
              L  G +  +P+I   +     E   A E    GG   KV
Sbjct: 284 AAGLADGAL--RPVIAREYPLE--EAAAAHEAVESGGAIGKV 321

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score = 98.2 bits (245), Expect = 5e-25
 Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 6/133 (4%)

Query: 189 PIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM 248
            +GL  +  A+A GA R+I  D   ++L +A+ LGAD    ++   ED    V ++    
Sbjct: 1   GVGLAAVQLAKALGAARVIAVDRSEEKLELAKELGADHV--INYRDEDFVERVRELTG-- 56

Query: 249 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVA-LTPAAAREVDVIGIFR 307
           G G+DV  DCVG   T+  AL   RPGG+V ++GL         L     +E+ ++G   
Sbjct: 57  GRGVDVVIDCVGAPATLEQALELLRPGGRVVVVGLPGGAPVPFPLRDLLLKELTILGSLG 116

Query: 308 Y-RSTWPLCIEFL 319
             R  +   +E L
Sbjct: 117 GGREEFEEALELL 129

Length = 131

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  100 bits (251), Expect = 6e-24
 Identities = 88/345 (25%), Positives = 125/345 (36%), Gaps = 66/345 (19%)

Query: 34  PTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 93
           P  GP  V VR+ A G+   D    +    A      P ++G + AG++E VG  V    
Sbjct: 23  PQPGPGQVLVRVHASGVNPLDTKIRR--GGAAARPPLPAILGCDVAGVVEAVGEGVTRFR 80

Query: 94  VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNV 153
           VGD V    G                       G     GSLA   V  A+L    P N+
Sbjct: 81  VGDEVYGCAGG---------------------LGGLQ--GSLAEYAVVDARLLALKPANL 117

Query: 154 SLEEGAMCEPLSVGVHA----CRRANVGPETNVMIM-GSGPIGLVTLLAARAFGAPRIII 208
           S+ E A   PL VG+ A      RA V     V+I  G+G +G V +  A+A GA   + 
Sbjct: 118 SMREAA-ALPL-VGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA--RVY 173

Query: 209 TDVDVQRLSIARNLGADETAKVSTDIEDV---DTDVGKIQNAMGSGIDVSFDCVGFDKTM 265
                ++ + AR+LGAD        + +     T         G G DV FD VG + T+
Sbjct: 174 ATASSEKAAFARSLGADPIIYYRETVVEYVAEHTG--------GRGFDVVFDTVGGE-TL 224

Query: 266 STALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIF------------RYRSTWP 313
             +  A    G+V  I    T     L P + R     G+F             +     
Sbjct: 225 DASFEAVALYGRVVSILGGATH---DLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILR 281

Query: 314 LCIEFLRSGKIDVKPLI-THRFGFTQKEIEDAFEISAQGGNAIKV 357
                +  G++  +PL+    F     E   A      G    K+
Sbjct: 282 EAARLVERGQL--RPLLDPRTFPLE--EAAAAHARLESGSARGKI 322

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 98.4 bits (246), Expect = 2e-23
 Identities = 71/267 (26%), Positives = 108/267 (40%), Gaps = 46/267 (17%)

Query: 26  LKIQPYHLPTLGPQDVKVRIKALGICGSDV----HHFKTMRCANFIVKKPMVIGHECAGI 81
           L+I+   +P  G  +V +R++A+G+  +D       +            P  +G+E AG+
Sbjct: 15  LRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEP--PPL----PARLGYEAAGV 68

Query: 82  IEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVH 141
           +E VG+ V    VGDRV++ P                              G+ A   + 
Sbjct: 69  VEAVGAGVTGFAVGDRVSVIP-----------------------AADLGQYGTYAEYALV 105

Query: 142 PAKLCYKLPDNVSLEEGAMCEPLSVGVHAC--RRANVGPETNVMIMG-SGPIGLVTLLAA 198
           PA    KLPD +S  E A      +  +      A + P  +V+I   S  +GL  +  A
Sbjct: 106 PAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIA 165

Query: 199 RAFGAPRIIITD--VDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF 256
            A GA  I  T        L     LGA     + TD ED+  +V +I    G G+DV F
Sbjct: 166 NAAGATVIATTRTSEKRDAL---LALGAAHV--IVTDEEDLVAEVLRITG--GKGVDVVF 218

Query: 257 DCVGFDKTMSTALNATRPGGKVCLIGL 283
           D VG     +   +A  PGG + + G 
Sbjct: 219 DPVG-GPQFAKLADALAPGGTLVVYGA 244

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|234025 TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenase, glutathione-independent

 Score = 98.4 bits (245), Expect = 6e-23
 Identities = 86/293 (29%), Positives = 136/293 (46%), Gaps = 48/293 (16%)

Query: 41  VKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVAL 100
           V +++    ICGSD H  +    A       +V+GHE  G + E G +V+ +++GD V++
Sbjct: 36  VILKVVTTNICGSDQHMVRGRTTA----PTGLVLGHEITGEVIEKGRDVEFIKIGDIVSV 91

Query: 101 EPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSL-------------AHKVVHPAK--L 145
              I+CG C  CK G   +C  +    +P   G+              +  V+ P     
Sbjct: 92  PFNIACGRCRNCKEGHTGVCLNV----NPARAGAAYGYVDMGGWVGGQSEYVMVPYADFN 147

Query: 146 CYKLPD-NVSLEE----GAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARA 200
             K PD + +LE+      + +    G H    A VGP + V I G+GP+GL    +A+ 
Sbjct: 148 LLKFPDRDQALEKIRDLTMLSDIFPTGYHGAVTAGVGPGSTVYIAGAGPVGLAAAASAQL 207

Query: 201 FGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS-GIDVSFDCV 259
            GA  +I+ D++  RL+ AR+ G  ET  +S D     T   +I+  +G   +D + DCV
Sbjct: 208 LGAAVVIVGDLNPARLAQARSFGC-ETVDLSKD----ATLPEQIEQILGEPEVDCAVDCV 262

Query: 260 GFD----------KTMSTALNA----TRPGGKVCLIGLAKTEMTVALTPAAAR 298
           GF+          +  +T LN+    TR GG + + GL  TE   A+  AA  
Sbjct: 263 GFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDPGAVDAAAKT 315

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent [Central intermediary metabolism, One-carbon metabolism]. Length = 393

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score = 96.0 bits (240), Expect = 2e-22
 Identities = 96/364 (26%), Positives = 144/364 (39%), Gaps = 79/364 (21%)

Query: 22  GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKK--PMVIGHECA 79
           G + L++     P  GP +V +R+ A G+  +D+      R   +        ++G E A
Sbjct: 11  GPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADL----LQRQGLYPPPPGASDILGLEVA 66

Query: 80  GIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKV 139
           G++  VG  V   +VGDRV          C+L   G Y                  A  V
Sbjct: 67  GVVVAVGPGVTGWKVGDRV----------CALLAGGGY------------------AEYV 98

Query: 140 VHPAKLCYKLPDNVSLEEGA-MCEPLSVGVHA-CRRANVGPETNVMIMG--SGPIGLVTL 195
           V PA     +P+ +SL E A + E          +   +     V+I G  SG +G   +
Sbjct: 99  VVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASG-VGTAAI 157

Query: 196 LAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 255
             A+A GA R+I T    ++L   R LGAD    ++   ED   +V +     G G+DV 
Sbjct: 158 QLAKALGA-RVIATAGSEEKLEACRALGADVA--INYRTEDFAEEVKEATG--GRGVDVI 212

Query: 256 FDCVG---FDKTMSTALNATRPGGKVCLIGL---AKTEMTVALTPAAAREVDVIG-IFRY 308
            D VG     +     L A  P G++ LIGL   AK E  + L P   + + + G   R 
Sbjct: 213 LDMVGGDYLARN----LRALAPDGRLVLIGLLGGAKAE--LDLAPLLRKRLTLTGSTLRS 266

Query: 309 RST--------------WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNA 354
           RS               WPL      SG+I  +P+I   F     E  +A        + 
Sbjct: 267 RSLEEKAALAAAFREHVWPL----FASGRI--RPVIDKVFPLE--EAAEAHRRMESNEHI 318

Query: 355 IKVM 358
            K++
Sbjct: 319 GKIV 322

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase

 Score = 94.9 bits (236), Expect = 7e-22
 Identities = 77/280 (27%), Positives = 124/280 (44%), Gaps = 27/280 (9%)

Query: 28  IQPYHLPTL--GPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEV 85
           + P+H      G +DV V+I   G+C SD+H   T++      + P+V GHE  GI+ ++
Sbjct: 25  LSPFHFSRRENGDEDVTVKILYCGVCHSDLH---TIKNEWGFTRYPIVPGHEIVGIVTKL 81

Query: 86  GSEVKSLEVGDRVALEPGI---SCGHCSLCKAGSYNLCPEMRF----FGSPPTN--GSLA 136
           G  VK  + GDRV +  G+   SC  C  C     N CP+M F     G   T   G  +
Sbjct: 82  GKNVKKFKEGDRVGV--GVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYS 139

Query: 137 HKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVT 194
             +V       + PDN+ L+ GA  +C  ++V           P  ++ + G G +G V 
Sbjct: 140 DMIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVA 199

Query: 195 LLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV 254
           +   +AFG    +I+    +       LGAD           V TD  K++ A+G+ +D 
Sbjct: 200 VKIGKAFGLKVTVISSSSNKEDEAINRLGADSFL--------VSTDPEKMKAAIGT-MDY 250

Query: 255 SFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTP 294
             D V     +   L   +  GK+  +GL +  + + + P
Sbjct: 251 IIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFP 290

Length = 360

>gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

 Score = 94.3 bits (235), Expect = 9e-22
 Identities = 90/330 (27%), Positives = 152/330 (46%), Gaps = 34/330 (10%)

Query: 33  LPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL 92
           L  L   +  V+++  G+C +D+H    +   +F  K   ++GHE  GI++EVG  V SL
Sbjct: 20  LRPLKHGEALVKMEYCGVCHTDLH----VANGDFGDKTGRILGHEGIGIVKEVGPGVTSL 75

Query: 93  EVGDRVALEPGI-SCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPD 151
           +VGDRV++      CGHC  C  G   LC  ++  G    +G +A + +  A    K+P+
Sbjct: 76  KVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGY-TVDGGMAEQCIVTADYAVKVPE 134

Query: 152 NVSLEEGAMCEPLSVGV---HACRRANVGPETNVMIMGSGPIG-LVTLLAARAFGAPRII 207
              L+          GV    A + + + P   + I G+G +G L    A   F A ++I
Sbjct: 135 G--LDPAQASSITCAGVTTYKAIKVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVI 191

Query: 208 ITDVDVQRLSIARNLGADETAKVSTDIEDVD----TDVGKIQNAMGSGI-DVSFDCVGFD 262
             D++  +L++A+ +GAD T   S  +EDV        G    A+ + +   +F+     
Sbjct: 192 AVDINDDKLALAKEVGADLTIN-SKRVEDVAKIIQEKTGGAHAAVVTAVAKAAFN----- 245

Query: 263 KTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG-IFRYRSTWPLCIEFLRS 321
                A++A R GG+V  +GL    M +++       ++V+G +   R       +F   
Sbjct: 246 ----QAVDAVRAGGRVVAVGLPPESMDLSIPRLVLDGIEVVGSLVGTRQDLEEAFQFGAE 301

Query: 322 GKIDVKPLITHRFGFTQKEIEDAFEISAQG 351
           GK  V P +  R     ++I D F+   QG
Sbjct: 302 GK--VVPKVQLR---PLEDINDIFDEMEQG 326

Length = 338

>gnl|CDD|176192 cd08230, glucose_DH, Glucose dehydrogenase

 Score = 94.2 bits (235), Expect = 1e-21
 Identities = 70/289 (24%), Positives = 104/289 (35%), Gaps = 50/289 (17%)

Query: 34  PTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKP------MVIGHECAGIIEEVGS 87
           P   P +V VR   +G+CG+D                       +V+GHE  G++EEVG 
Sbjct: 21  PEPTPGEVLVRTLEVGVCGTDRE------IVAGEYGTAPPGEDFLVLGHEALGVVEEVGD 74

Query: 88  EVKSLEVGDRVALEPGI---SCGHCSLCKAGSYNLCPEMRFF--GSPPTNGSLAHKVVHP 142
               L  GD V           G C  C+ G  + C    +   G    +G +    V  
Sbjct: 75  G-SGLSPGDLVV---PTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDD 130

Query: 143 AKLCYKLPDNVSLEEGAMCEPLSVGVHA-------CRRANVGPETNVMIMGSGPIGLVTL 195
            +   K+P +++ + G + EPLSV   A        +R         +++G+GPIGL+  
Sbjct: 131 PEYLVKVPPSLA-DVGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAA 189

Query: 196 LAARAFGAPRIII--TDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGID 253
           L  R  G    ++   D    +  I   LGA       T + +V               D
Sbjct: 190 LLLRLRGFEVYVLNRRDPPDPKADIVEELGATYVNSSKTPVAEVKLVG---------EFD 240

Query: 254 VSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDV 302
           +  +  G       AL A  P G V L G           P   RE +V
Sbjct: 241 LIIEATGVPPLAFEALPALAPNGVVILFG----------VPGGGREFEV 279

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 355

>gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD)

 Score = 93.8 bits (234), Expect = 1e-21
 Identities = 77/325 (23%), Positives = 130/325 (40%), Gaps = 36/325 (11%)

Query: 33  LPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL 92
           +P  GP +V ++++A G+C SD         A   +  P V GHE  G I+ VG  V   
Sbjct: 20  VPLPGPGEVLIKVEACGVCHSDAF---VKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRW 76

Query: 93  EVGDRVALE-PGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPD 151
           +VGDRV +   G  CG C  C+ G +  C   +  G     G   + +     L  ++PD
Sbjct: 77  KVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALA-RIPD 135

Query: 152 NVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIIT 209
           ++   E A  +C  ++   +A R +   P   V + G G +G + +  A   G  R +  
Sbjct: 136 DLDAAEAAPLLCAGVTT-FNALRNSGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAI 193

Query: 210 DVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTAL 269
                +  +AR LGA         I+    DV +    +G G  +        K +S  +
Sbjct: 194 SRGSDKADLARKLGAHHY------IDTSKEDVAEALQELG-GAKLILATAPNAKAISALV 246

Query: 270 NATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPL--------CIEFLRS 321
               P GK+ ++G A   + V+          + G       WP          ++F  S
Sbjct: 247 GGLAPRGKLLILGAAGEPVAVSPLQLIMGRKSIHG-------WPSGTALDSEDTLKF--S 297

Query: 322 GKIDVKPLITHRFGFTQKEIEDAFE 346
               V+P++   F   +    +A++
Sbjct: 298 ALHGVRPMV-ETFPLEK--ANEAYD 319

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333

>gnl|CDD|132245 TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

 Score = 92.7 bits (230), Expect = 4e-21
 Identities = 80/330 (24%), Positives = 143/330 (43%), Gaps = 31/330 (9%)

Query: 33  LPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL 92
           +P LG  DV V++   G+C +D+ ++      N     P+ +GHE +G + + G+   S 
Sbjct: 18  IPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNH--ALPLALGHEISGRVIQAGAGAASW 75

Query: 93  EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDN 152
            +G  V +   I CG C LCK G   +C   +  G+    G  +H VV    LC  + D 
Sbjct: 76  -IGKAVIVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLC--VVDE 132

Query: 153 VSLEEGAM--------CEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAP 204
             L    +         + ++    A  +A +     V+++G+G +G   +  A+A GA 
Sbjct: 133 ARLAAAGLPLEHVSVVADAVTTPYQAAVQAGLKKGDLVIVIGAGGVGGYMVQTAKAMGAA 192

Query: 205 RIIITDVDVQRLSIARNLGADETA----KVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG 260
            + I D+D ++L + +  GAD T     K + +++ +     K +    +G  + F+C G
Sbjct: 193 VVAI-DIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFAKARGLRSTGWKI-FECSG 250

Query: 261 FDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIF-----RYRSTWPLC 315
                 +AL+    GG + ++G    +    L+   A     +G +     RY +   L 
Sbjct: 251 SKPGQESALSLLSHGGTLVVVGYTMAKTEYRLSNLMAFHARALGNWGCPPDRYPAALDLV 310

Query: 316 IEFLRSGKIDVKPLITHRFGFTQKEIEDAF 345
           +     GKI + P +  R      +IE  F
Sbjct: 311 L----DGKIQLGPFVERR---PLDQIEHVF 333

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 349

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 91.9 bits (229), Expect = 5e-21
 Identities = 84/336 (25%), Positives = 126/336 (37%), Gaps = 62/336 (18%)

Query: 33  LPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL 92
           +PT  P +V V++ A  +   D    +           P + G + AG +  VGS V   
Sbjct: 21  IPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRF 80

Query: 93  EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDN 152
           +VGD V                  +   P           G+LA  VV P     K P+ 
Sbjct: 81  KVGDEV------------------FGRLPPKGG-------GALAEYVVAPESGLAKKPEG 115

Query: 153 VSLEEGAMCEPLSVGVHAC----RRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRII 207
           VS EE A   P++ G+ A         V P   V+I G SG +G   +  A+A GA    
Sbjct: 116 VSFEEAA-ALPVA-GLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA---H 170

Query: 208 ITDVDVQR-LSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDK-TM 265
           +T V   R   + R+LGADE   +    ED            G   DV FD VG    ++
Sbjct: 171 VTGVCSTRNAELVRSLGADEV--IDYTTEDFVALTAG-----GEKYDVIFDAVGNSPFSL 223

Query: 266 STALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCI--------- 316
             A  A +PGG+   +G   + + + L          +G    R  + L           
Sbjct: 224 YRASLALKPGGRYVSVGGGPSGLLLVLLLLPLT----LGGGGRRLKFFLAKPNAEDLEQL 279

Query: 317 -EFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG 351
            E +  GK+  KP+I   +    ++  +A+     G
Sbjct: 280 AELVEEGKL--KPVIDSVYPL--EDAPEAYRRLKSG 311

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase

 Score = 91.4 bits (227), Expect = 1e-20
 Identities = 77/267 (28%), Positives = 122/267 (45%), Gaps = 25/267 (9%)

Query: 31  YHLPTLGPQDVKVRIKALGICGSDVHHFKT-MRCANFIVKKPMVIGHECAGIIEEVGSEV 89
           Y L   GP+DV +++   GIC +D+H  K  +  +N+    PMV GHE  G + EVGS+V
Sbjct: 27  YTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNY----PMVPGHEVVGEVVEVGSDV 82

Query: 90  KSLEVGDRVALEPGI-SCGHCSLCKAGSYNLCPEMRFFG-------SPPTNGSLAHKVVH 141
               VGD V +   +  CG CS CK+     C + R +          PT G  A  +V 
Sbjct: 83  SKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNK-RIWSYNDVYTDGKPTQGGFASAMVV 141

Query: 142 PAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAAR 199
             K   K+P+ ++ E+ A  +C  ++V                 I+G G +G + +  A+
Sbjct: 142 DQKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAK 201

Query: 200 AFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV 259
           A G    +I+  D +R     +LGAD+          V +D  ++Q A  S +D   D V
Sbjct: 202 AMGHHVTVISSSDKKREEALEHLGADDYL--------VSSDAAEMQEAADS-LDYIIDTV 252

Query: 260 GFDKTMSTALNATRPGGKVCLIGLAKT 286
                +   L+  +  GK+ L+G+  T
Sbjct: 253 PVFHPLEPYLSLLKLDGKLILMGVINT 279

Length = 357

>gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family

 Score = 87.3 bits (217), Expect = 2e-19
 Identities = 86/355 (24%), Positives = 138/355 (38%), Gaps = 69/355 (19%)

Query: 26  LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPM--VIGHECAGIIE 83
           L +    LP     +V +R+ A G+   D+      R   +        ++G E AG + 
Sbjct: 15  LVLVEVPLPVPKAGEVLIRVAAAGVNRPDL----LQRAGKYPPPPGASDILGLEVAGEVV 70

Query: 84  EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPA 143
            VG  V   +VGDRV          C+L   G Y                  A  V  PA
Sbjct: 71  AVGEGVSRWKVGDRV----------CALVAGGGY------------------AEYVAVPA 102

Query: 144 KLCYKLPDNVSLEEGAMCEP---LSVGVHACRRANVGPETNVMIM-GSGPIGLVTLLAAR 199
                +P+ +SL E A   P    +V  +  +R  +     V+I  G+  IG   +  A+
Sbjct: 103 GQVLPVPEGLSLVEAAAL-PETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAK 161

Query: 200 AFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV 259
           AFGA R+  T    ++ +    LGAD  A    + + V  +V K +   G G+DV  D V
Sbjct: 162 AFGA-RVFTTAGSDEKCAACEALGAD-IAINYREEDFV--EVVKAETG-GKGVDVILDIV 216

Query: 260 GFDKTMSTALNATRPGGKVCLIGLAK-TEMTVALTPAAAREVDVIG-IFRYRST------ 311
           G    ++  + A    G++  IG     +  + L P  A+ + + G   R R        
Sbjct: 217 GGS-YLNRNIKALALDGRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAI 275

Query: 312 --------WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 358
                   WPL    L SG++  +P+I   F    ++   A  +   G +  K++
Sbjct: 276 AAELREHVWPL----LASGRV--RPVIDKVFPL--EDAAQAHALMESGDHIGKIV 322

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325

>gnl|CDD|215442 PLN02827, PLN02827, Alcohol dehydrogenase-like

 Score = 87.7 bits (217), Expect = 3e-19
 Identities = 90/350 (25%), Positives = 150/350 (42%), Gaps = 53/350 (15%)

Query: 37  GPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGD 96
            P ++++++ +  +C SD+  +++   A F    P + GHE +GI+E +G  V   E GD
Sbjct: 36  QPLEIRIKVVSTSLCRSDLSAWESQ--ALF----PRIFGHEASGIVESIGEGVTEFEKGD 89

Query: 97  RVALEPGISCGHCSLCKAGSYNLCPEM--------------RFF--GSP-----PTNGSL 135
            V       CG C  C +G  N+C  +              RF   G P       +   
Sbjct: 90  HVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFS 149

Query: 136 AHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHA-----CRRANVGPETNVMIMGSGPI 190
            + VVH +    K+     L +  +   LS GV A        A+V   ++V+I G G +
Sbjct: 150 EYTVVH-SGCAVKVDPLAPLHKICL---LSCGVAAGLGAAWNVADVSKGSSVVIFGLGTV 205

Query: 191 GLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE---TAKVSTDIEDVDTDVGKIQNA 247
           GL     A+  GA +II  D++ ++   A+  G  +      +S  I+ V      I+  
Sbjct: 206 GLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINPNDLSEPIQQV------IKRM 259

Query: 248 MGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVA-----LTPAAAREVD 301
            G G D SF+CVG     +TAL +   G G    +G+ K +  V+            +  
Sbjct: 260 TGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGS 319

Query: 302 VIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG 351
           + G ++ +S  P  ++   + +I +   ITH   F   EI  AFE+  +G
Sbjct: 320 LFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSF--DEINKAFELMREG 367

Length = 378

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score = 81.5 bits (202), Expect = 2e-17
 Identities = 75/342 (21%), Positives = 124/342 (36%), Gaps = 76/342 (22%)

Query: 40  DVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVA 99
           +V+V +KA G+   DV     +     +      +G EC+GI+  VGS V  L+VGDRV 
Sbjct: 2   EVEVEVKAAGLNFRDV-----LVALGLLPGDETPLGLECSGIVTRVGSGVTGLKVGDRVM 56

Query: 100 LEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGA 159
              G++                           G+ A  V   A+L  K+PD++S EE A
Sbjct: 57  ---GLA--------------------------PGAFATHVRVDARLVVKIPDSLSFEEAA 87

Query: 160 MCEPLSVGVHAC-------RRANVGPETNVMIM-GSGPIGLVTLLAARAFGAPRIIIT-- 209
                ++ V            A +    +V+I   +G +G   +  A+  GA  +  T  
Sbjct: 88  -----TLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGA-EVFATVG 141

Query: 210 -DVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTA 268
            +   + L   R LG       S+        + +     G G+DV  + +   + +  +
Sbjct: 142 SEEKREFL---RELGGPVDHIFSSRDLSFADGILRATG--GRGVDVVLNSLS-GELLRAS 195

Query: 269 LNATRPGGKVCLIGLAKT--------EMTVALTPAAAREVDVIGIFRYR-----STWPLC 315
                P G+   + + K          M   L   +   VD+  + R R           
Sbjct: 196 WRCLAPFGR--FVEIGKRDILSNSKLGMRPFLRNVSFSSVDLDQLARERPELLRELLREV 253

Query: 316 IEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKV 357
           +E L +G +  KPL             DAF +   G +  KV
Sbjct: 254 LELLEAGVL--KPLPPTVVPSA--SEIDAFRLMQSGKHIGKV 291

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score = 81.6 bits (202), Expect = 2e-17
 Identities = 82/357 (22%), Positives = 133/357 (37%), Gaps = 67/357 (18%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCA-NFIVKKPMVIGHECAGII 82
             L++    +P  GP +V VR+ A  I  SD+    T+  A       P V G+E  G++
Sbjct: 12  LVLELVSLPIPPPGPGEVLVRMLAAPINPSDLI---TISGAYGSRPPLPAVPGNEGVGVV 68

Query: 83  EEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHP 142
            EVGS V  L VG RV                                  G+    VV P
Sbjct: 69  VEVGSGVSGLLVGQRVLP----------------------------LGGEGTWQEYVVAP 100

Query: 143 AKLCYKLPDNVSLEEGAMC--EPLSVGVHACRRANVGPETNVMIM---GSGPIG--LVTL 195
           A     +PD++S E+ AM    PL+  +         P  + +I     S  +G  L+ L
Sbjct: 101 ADDLIPVPDSISDEQAAMLYINPLTAWL-MLTEYLKLPPGDWVIQNAANSA-VGRMLIQL 158

Query: 196 LAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 255
                F    ++  D  V+ L   + LGADE   + +  ED+   V +     G+G  ++
Sbjct: 159 AKLLGFKTINVVRRDEQVEEL---KALGADE--VIDSSPEDLAQRVKEATG--GAGARLA 211

Query: 256 FDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDV-IGIF-------- 306
            D VG +   +    + RPGG +   GL   E       +     D+ +  F        
Sbjct: 212 LDAVGGESA-TRLARSLRPGGTLVNYGLLSGEPVP-FPRSVFIFKDITVRGFWLRQWLHS 269

Query: 307 RYRSTWPLC----IEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 359
             +          I+ + +G +     +  +F    ++ E+A   + Q G   KV+ 
Sbjct: 270 ATKEAKQETFAEVIKLVEAGVL--TTPVGAKFPL--EDFEEAVAAAEQPGRGGKVLL 322

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|131869 TIGR02822, adh_fam_2, zinc-binding alcohol dehydrogenase family protein

 Score = 81.5 bits (201), Expect = 2e-17
 Identities = 66/201 (32%), Positives = 99/201 (49%), Gaps = 21/201 (10%)

Query: 33  LPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVI-GHECAGIIEEVGSEVKS 91
           +P  GP ++ VR++A G+C +D+H  +     +  V +P V  GHE  G +   G++   
Sbjct: 22  VPRPGPGELLVRVRACGVCRTDLHVSE----GDLPVHRPRVTPGHEVVGEVAGRGADAGG 77

Query: 92  LEVGDRVALEPGI-----SCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLC 146
             VGDRV    GI     +CG C  C+ G+ NLCP  R+ G   T+G  A     PA   
Sbjct: 78  FAVGDRV----GIAWLRRTCGVCRYCRRGAENLCPASRYTGW-DTDGGYAEYTTVPAAFA 132

Query: 147 YKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAP 204
           Y+LP      E A  +C  + +G  A  RA++ P   + + G G    +T   A A GA 
Sbjct: 133 YRLPTGYDDVELAPLLCAGI-IGYRALLRASLPPGGRLGLYGFGGSAHLTAQVALAQGAT 191

Query: 205 RIIIT-DVDVQRLSIARNLGA 224
             ++T     +RL++A  LGA
Sbjct: 192 VHVMTRGAAARRLALA--LGA 210

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized [Energy metabolism, Fermentation]. Length = 329

>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 80.7 bits (200), Expect = 5e-17
 Identities = 70/284 (24%), Positives = 111/284 (39%), Gaps = 64/284 (22%)

Query: 18  AWLL----GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANF--IVKKP 71
           A +L    G+  LK++   LP     +V+VR++A G+  +D+      R   +    K P
Sbjct: 2   AVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADL----MARQGLYDSAPKPP 57

Query: 72  MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT 131
            V G ECAG +E VG  VK  +VGDRV            L + G Y              
Sbjct: 58  FVPGFECAGTVEAVGEGVKDFKVGDRVM----------GLTRFGGY-------------- 93

Query: 132 NGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHA----CRRANVGPETNVMI-MG 186
               A  V  PA   + LPD +S EE A        + A        N+ P  +V++   
Sbjct: 94  ----AEVVNVPADQVFPLPDGMSFEEAAAF--PVNYLTAYYALFELGNLRPGQSVLVHSA 147

Query: 187 SGPIGLVTLLAARAFGAPRIIITDVDV------QRLSIARNLGADETAKVSTDIEDVDTD 240
           +G +GL      +        + +V V       +    +  G        T  +D   +
Sbjct: 148 AGGVGLAAGQLCKT-------VPNVTVVGTASASKHEALKENGVTHVIDYRT--QDYVEE 198

Query: 241 VGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA 284
           V KI      G+D+  D +G + T   + +  +P G++ + G A
Sbjct: 199 VKKIS---PEGVDIVLDALGGEDT-RKSYDLLKPMGRLVVYGAA 238

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|132409 TIGR03366, HpnZ_proposed, putative phosphonate catabolism associated alcohol dehydrogenase

 Score = 79.5 bits (196), Expect = 6e-17
 Identities = 63/253 (24%), Positives = 99/253 (39%), Gaps = 24/253 (9%)

Query: 73  VIGHECAGIIEEVGSEV------KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF 126
           V+GHE  G +  +            L +G RV     + CG C  C+ G    C  +R +
Sbjct: 1   VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKY 60

Query: 127 GSPPTN------GSLAHKVVHPAKL-CYKLPDNV--SLEEGAMCEPLSVGVHACRRANVG 177
           G    +      G  A     PA      +PD++  ++   A C   +V + A   A   
Sbjct: 61  GHEALDSGWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATV-MAALEAAGDL 119

Query: 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDV 237
               V+++G+G +GL    AA A GA R++  D    R  +A + GA   A+      +V
Sbjct: 120 KGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRRELALSFGATALAE-----PEV 174

Query: 238 DTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAA 297
             +        G G+DV+ +  G    +   L +   GG   L G       VAL P   
Sbjct: 175 LAERQGGLQN-GRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQV 233

Query: 298 --REVDVIGIFRY 308
             R + + G+  Y
Sbjct: 234 VRRWLTIRGVHNY 246

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. Length = 280

>gnl|CDD|177834 PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase

 Score = 77.0 bits (189), Expect = 1e-15
 Identities = 77/297 (25%), Positives = 137/297 (46%), Gaps = 29/297 (9%)

Query: 13  NQNMA-AWLLGIKTLKIQPYHLPTL--GPQDVKVRIKALGICGSDVHHFKTMRCANFIVK 69
           +QN A  W    ++  + P+H      G  DV V+I   G+C SD+H   T++      +
Sbjct: 3   DQNKAFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLH---TIKNHWGFSR 59

Query: 70  KPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGI-SCGHCSLCKAGSYNLCPEMRF-FG 127
            P++ GHE  GI  +VG  V   + GDRV +   I SC  C  C     N CP++ F + 
Sbjct: 60  YPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYN 119

Query: 128 SPPTNGS-----LAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPET 180
           S  ++G+      +  +V   +    +PD +  + GA  +C  ++V     +   +  E+
Sbjct: 120 SRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITV-YSPMKYYGMTKES 178

Query: 181 --NVMIMGSGPIGLVTLLAARAFGAPRIIIT-DVDVQRLSIARNLGADETAKVSTDIEDV 237
              + + G G +G + +   +AFG    +I+   + +R +I R LGAD           V
Sbjct: 179 GKRLGVNGLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDR-LGADSFL--------V 229

Query: 238 DTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTP 294
            TD  K++ A+G+ +D   D V  +  +    +  +  GK+  +GL +  + + + P
Sbjct: 230 TTDSQKMKEAVGT-MDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFP 285

Length = 375

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score = 74.2 bits (183), Expect = 7e-15
 Identities = 72/265 (27%), Positives = 109/265 (41%), Gaps = 45/265 (16%)

Query: 25  TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEE 84
            LK++   +P   P  V +R+KA G+  S++    T +  +  VK P V+G E  G +EE
Sbjct: 14  VLKLREIPIPEPKPGWVLIRVKAFGLNRSEIF---TRQGHSPSVKFPRVLGIEAVGEVEE 70

Query: 85  V-GSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEM-RFFGSPPTNGSLAHKVVHP 142
             G        G RVA   G                   M R F     +GS A   + P
Sbjct: 71  APGGT---FTPGQRVATAMG------------------GMGRTF-----DGSYAEYTLVP 104

Query: 143 AKLCYKLPDNVSLEE-GAMCEPLSVGVHACRRA-NVGPETNVMIMG--SGPIGLVTLLAA 198
            +  Y +  ++S  E  A+ E       +  R+  + P   ++I G  S  +GL  L  A
Sbjct: 105 NEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSS-VGLAALKLA 163

Query: 199 RAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC 258
           +A G   +  T    +R ++ + LGADE   V  D   +   +         G D   + 
Sbjct: 164 KALG-ATVTATTRSPERAALLKELGADE---VVIDDGAIAEQLRAA----PGGFDKVLEL 215

Query: 259 VGFDKTMSTALNATRPGGKVCLIGL 283
           VG   T+  +L   RPGG VC+ GL
Sbjct: 216 VG-TATLKDSLRHLRPGGIVCMTGL 239

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|176200 cd08238, sorbose_phosphate_red, L-sorbose-1-phosphate reductase

 Score = 74.4 bits (183), Expect = 1e-14
 Identities = 57/252 (22%), Positives = 106/252 (42%), Gaps = 40/252 (15%)

Query: 14  QNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKT----MRCANFIVK 69
           +  A  + G   L+++ + LP +   ++ VR+ +  +C S            +  N + K
Sbjct: 2   KTKAWRMYGKGDLRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAK 61

Query: 70  KPMVIGHECAGIIEEVGSEVKS-LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS 128
           +P+++GHE AG I +VG + +   + G R  ++P +       C   SY           
Sbjct: 62  EPVILGHEFAGTILKVGKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYP-------- 113

Query: 129 PPTNGSLAHKVVHPAKL----CYKLPDNVSLEEGAMCEPLS--VG-VHACRRANVGPETN 181
               G LA   + P ++    C  + +     E ++ EPLS  +G   A      G   +
Sbjct: 114 ----GGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPLSCVIGAYTANYHLQPGEYRH 169

Query: 182 VM----------IMGSGPIGLVTLLAARAFGAP----RIIITDVDVQRLSIARNLGADET 227
            M          + G+GP+GL+ +    A   P     +++TDV+ +RL+ A+ L   E 
Sbjct: 170 RMGIKPGGNTAILGGAGPMGLMAI--DYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEA 227

Query: 228 AKVSTDIEDVDT 239
           A    ++  V+ 
Sbjct: 228 ASRGIELLYVNP 239

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 410

>gnl|CDD|176199 cd08237, ribitol-5-phosphate_DH, ribitol-5-phosphate dehydrogenase

 Score = 73.9 bits (182), Expect = 1e-14
 Identities = 85/323 (26%), Positives = 135/323 (41%), Gaps = 40/323 (12%)

Query: 40  DVKVRIKALGICGSDVHHFKTMRCANFIVKK-PMVIGHECAGIIEEVGSEVKSLEVGDRV 98
            V VR   L IC +D  +++  R    + KK PM + HE  GI   V     + +VG +V
Sbjct: 27  WVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHE--GIGVVVSDPTGTYKVGTKV 84

Query: 99  ALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEG 158
            + P        +      N  P  RF  S   +G +   V  P     KLPDNV  E  
Sbjct: 85  VMVPNTPVEKDEIIPE---NYLPSSRFRSSG-YDGFMQDYVFLPPDRLVKLPDNVDPEVA 140

Query: 159 AMCEPLSVGVHACRRAN---VGPETNVMIMGSGPIGLVTLLAAR-AFGAPRIIITDVDVQ 214
           A  E +SVGVHA  R           + + G G +G +T L  +  +   ++++     +
Sbjct: 141 AFTELVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQE 200

Query: 215 RLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNA--- 271
           +L       ADET  +    ED+              +D +F+CVG   + S A+N    
Sbjct: 201 KL--DLFSFADETYLIDDIPEDL-------------AVDHAFECVGGRGSQS-AINQIID 244

Query: 272 -TRPGGKVCLIGLAKTEMTVALTPAAARE--VDVIGIFRY-RSTWPLCIEFL-RSGKI-- 324
             RP G + L+G+  +E  V +      E  + ++G  R  R  +   +E L R+ ++  
Sbjct: 245 YIRPQGTIGLMGV--SEYPVPINTRMVLEKGLTLVGSSRSTREDFERAVELLSRNPEVAE 302

Query: 325 DVKPLITHRFGFTQ-KEIEDAFE 346
            ++ L+   F      +I  AFE
Sbjct: 303 YLRKLVGGVFPVRSINDIHRAFE 325

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 341

>gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1

 Score = 72.6 bits (179), Expect = 3e-14
 Identities = 82/355 (23%), Positives = 130/355 (36%), Gaps = 93/355 (26%)

Query: 38  PQDVKVRIKALGICGSDV--------HHFKTMRCANFIVKK----PMVIGHECAGIIEEV 85
           P  V +++ A  +   DV              R            P+ +G +C+G++ ++
Sbjct: 29  PNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRDCSGVVVDI 88

Query: 86  GSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPP--TNGSLAHKVVHPA 143
           GS VKS E+GD V                           +G+ P  + G+ A  VV P 
Sbjct: 89  GSGVKSFEIGDEV---------------------------WGAVPPWSQGTHAEYVVVPE 121

Query: 144 KLCYKLPDNVSLEEGAMCEPLSVGVHAC-------RRANVGPET----NVMIMG-SGPIG 191
               K P N+S EE A     S+                + P+      V+I+G SG +G
Sbjct: 122 NEVSKKPKNLSHEEAA-----SLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVG 176

Query: 192 LVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAK-VSTDIEDVDTDVGKIQNAMGS 250
              +   +A+GA   + T      + + ++LGAD+     + D E+  T+ GK       
Sbjct: 177 TFAIQLLKAWGA--HVTTTCSTDAIPLVKSLGADDVIDYNNEDFEEELTERGK------- 227

Query: 251 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIG---LAKTE----MTVALTPAAAREVDVI 303
             DV  D VG D     AL   + GG    +    L  T+    +   L  A       +
Sbjct: 228 -FDVILDTVGGDTE-KWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNV 285

Query: 304 GIFRYRST--W------PLCIEFLR----SGKIDVKPLITHRFGFTQKEIEDAFE 346
                 S   W         ++ L      GKI  KP+I   F F  +E+ +A+E
Sbjct: 286 KSLLKGSHYRWGFFSPSGSALDELAKLVEDGKI--KPVIDKVFPF--EEVPEAYE 336

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 70.0 bits (172), Expect = 2e-13
 Identities = 67/256 (26%), Positives = 106/256 (41%), Gaps = 49/256 (19%)

Query: 16  MAAWLLGIK----TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCAN-FIVKK 70
           M AW+L        L ++   +P  G  +V V++ A G+   D         A       
Sbjct: 1   MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWK-----VIAWGPPAWS 55

Query: 71  -PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP 129
            P V G + AG++  VG++V   +VGDRVA        H SL +                
Sbjct: 56  YPHVPGVDGAGVVVAVGAKVTGWKVGDRVAY-------HASLAR---------------- 92

Query: 130 PTNGSLAHKVVHPAKLCYKLPDNVSLEEGAM--CEPLSVGVHACRRANVGPETNVMIMG- 186
              GS A   V  A+    LPD++S EE A   C  L+      ++  +     ++I G 
Sbjct: 93  --GGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGG 150

Query: 187 SGPIGLVTLLAARAFGAPRIIIT--DVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI 244
           +G +G   +  A+  G  R+I T    + + +   ++LGAD    +  + EDV   + +I
Sbjct: 151 AGGVGSFAVQLAKRAGL-RVITTCSKRNFEYV---KSLGADHV--IDYNDEDVCERIKEI 204

Query: 245 QNAMGSGIDVSFDCVG 260
               G G+D   D VG
Sbjct: 205 TG--GRGVDAVLDTVG 218

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score = 69.3 bits (171), Expect = 2e-13
 Identities = 80/353 (22%), Positives = 132/353 (37%), Gaps = 106/353 (30%)

Query: 43  VRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEP 102
           + ++A G+      +F+ +  A  +     V+G ECAG++  VG  V  L VGDRV    
Sbjct: 1   IEVRAAGL------NFRDVLIALGLYPGEAVLGGECAGVVTRVGPGVTGLAVGDRVM--- 51

Query: 103 GISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE 162
           G+                            G+ A +VV  A+L   +PD  S EE A   
Sbjct: 52  GL--------------------------APGAFATRVVTDARLVVPIPDGWSFEEAA--- 82

Query: 163 PLSVGV------HA-CRRANVGPETNVMI-MGSGPIGLVTLLAARAFGAPRIIITDVDVQ 214
             +V V      +A    A + P  +V+I   +G +G     AA                
Sbjct: 83  --TVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVG----QAA---------------- 120

Query: 215 RLSIARNLGADETAKVST------------DIEDV----DTD-VGKIQNAM-GSGIDVSF 256
            + +AR+LGA+  A   +              + +    D     +I  A  G G+DV  
Sbjct: 121 -IQLARHLGAEVFATAGSPEKRDFLRALGIPDDHIFSSRDLSFADEILRATGGRGVDVVL 179

Query: 257 DCVGFDKTMSTALNATRPGGKVCLIGLAKTEM----TVALTPAAA----REVDVIGIF-- 306
           + +  +   ++ L    PGG+   + + K ++     +A+ P         VD+  +   
Sbjct: 180 NSLSGEFLDAS-LRCLAPGGR--FVEIGKRDIRDNSQLAMAPFRPNVSYHAVDLDALEEG 236

Query: 307 --RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKV 357
             R R      +E    G +  +PL    F  +  + EDAF    QG +  KV
Sbjct: 237 PDRIRELLAEVLELFAEGVL--RPLPVTVFPIS--DAEDAFRYMQQGKHIGKV 285

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 68.1 bits (167), Expect = 8e-13
 Identities = 73/275 (26%), Positives = 105/275 (38%), Gaps = 58/275 (21%)

Query: 22  GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKK--PMVIGHECA 79
           G + LK+    LP     +V V+++A G+  +DV     MR   +  +   P   G++  
Sbjct: 11  GPEVLKVVEADLPEPAAGEVVVKVEASGVSFADV----QMRRGLYPDQPPLPFTPGYDLV 66

Query: 80  GIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKV 139
           G ++ +GS V   EVGDRVA          +L + G                    A  +
Sbjct: 67  GRVDALGSGVTGFEVGDRVA----------ALTRVGGN------------------AEYI 98

Query: 140 VHPAKLCYKLPDNVSLEEGAMCEPLSVGVHAC----RRANVGPETNVMIMG-SGPIGLVT 194
              AK    +P+ V   E A+C  L   V A     R A V     V+I G SG +G   
Sbjct: 99  NLDAKYLVPVPEGVDAAE-AVCLVL-NYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQAL 156

Query: 195 LLAARAFGAPRIIITDVDVQRLSIARNLGA---DETAKVSTDIEDVDTDVGKIQNAMGSG 251
           L  A   GA  +  T    +  +  R LGA   D   K   D        G        G
Sbjct: 157 LELALLAGA-EVYGT-ASERNHAALRELGATPIDYRTK---DWLPAMLTPG--------G 203

Query: 252 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT 286
           +DV FD VG + +   +  A  PGG +   G   +
Sbjct: 204 VDVVFDGVGGE-SYEESYAALAPGGTLVCYGGNSS 237

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 65.4 bits (160), Expect = 7e-12
 Identities = 59/269 (21%), Positives = 94/269 (34%), Gaps = 39/269 (14%)

Query: 34  PTLGPQDVKVRIKALGICGSDV-----------------HHFKTMRCANFIVKKPMVIGH 76
           PT  P +V +R+ A G+  +D+                             +  P + G 
Sbjct: 24  PTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRIQGA 83

Query: 77  ECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLA 136
           +  G +  VG  V +  +G+RV ++P I             +   ++ + GS   +G  A
Sbjct: 84  DIVGRVVAVGEGVDTARIGERVLVDPSIR--------DPPEDDPADIDYIGS-ERDGGFA 134

Query: 137 HKVVHPAKLCYKLPDNVSLEE-GAMCEPLSVGVHACRRANVGPETNVMIMG-SGPIGLVT 194
              V PA+  Y +   +S  E        S   +   RA VG    V++ G SG +G   
Sbjct: 135 EYTVVPAENAYPVNSPLSDVELATFPCSYSTAENMLERAGVGAGETVLVTGASGGVGSAL 194

Query: 195 L-LAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGID 253
           + LA R       +      + +   R LGAD               +   +   G  +D
Sbjct: 195 VQLAKRRGAIVIAVAGAAKEEAV---RALGADTVILRDAP------LLADAKALGGEPVD 245

Query: 254 VSFDCVGFDKTMSTALNATRPGGKVCLIG 282
           V  D VG        L   RPGG+    G
Sbjct: 246 VVADVVG-GPLFPDLLRLLRPGGRYVTAG 273

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|188164 TIGR01751, crot-CoA-red, crotonyl-CoA reductase

 Score = 64.0 bits (156), Expect = 2e-11
 Identities = 57/224 (25%), Positives = 90/224 (40%), Gaps = 32/224 (14%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGI--------CGSDVHHFKTMRCANFIVKKPMVIG 75
           + ++++   +P LGP +V V + A G+         G  V  F  +R    +     +IG
Sbjct: 23  QAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGKLDLPFHIIG 82

Query: 76  HECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSL-------CKAGSYNLCPEMRFFGS 128
            + +G++  VG  V   +VGD V          C          + G   L  E R +G 
Sbjct: 83  SDASGVVWRVGPGVTRWKVGDEVVA-------SCLQVDLTAPDGRDGDPMLSSEQRIWGY 135

Query: 129 PPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRR------ANVGPETNV 182
               GS A   +         P +++ EE A C  L  G  A R+      A V P  NV
Sbjct: 136 ETNFGSFAEFALVKDYQLMPKPKHLTWEEAA-CPGL-TGATAYRQLVGWNPAAVKPGDNV 193

Query: 183 MIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD 225
           +I G +G +G      ARA G   + +     ++    R+LGA+
Sbjct: 194 LIWGAAGGLGSYATQLARAGGGNPVAVVS-SPEKAEYCRSLGAE 236

The enzyme modelled by This model is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. Length = 398

>gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase

 Score = 62.8 bits (153), Expect = 6e-11
 Identities = 58/210 (27%), Positives = 87/210 (41%), Gaps = 27/210 (12%)

Query: 34  PTLGPQDVKVRIKALGICGSDVH------------HFKTMRCANFIVKKPMVIGHECAGI 81
           P LGP +V V + A G+  ++V               +  R   +      + G + +GI
Sbjct: 38  PELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPY-----HIGGSDASGI 92

Query: 82  IEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVH 141
           +  VG  VK+ +VGD V +   +  G+      G     P  R +G     GS A   + 
Sbjct: 93  VWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALV 152

Query: 142 PAKLCYKLPDNVSLEEGAMCEPLSVGVHACRR------ANVGPETNVMIMG-SGPIGLVT 194
            A      P ++S EE A    L VG  A R         V P  NV+I G SG +G + 
Sbjct: 153 QATQLMPKPKHLSWEEAA-AYML-VGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMA 210

Query: 195 LLAARAFGAPRIIITDVDVQRLSIARNLGA 224
           +  ARA GA  + +   + ++    R LGA
Sbjct: 211 IQLARAAGANPVAVVSSE-EKAEYCRALGA 239

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393

>gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase

 Score = 58.9 bits (143), Expect = 9e-10
 Identities = 69/283 (24%), Positives = 102/283 (36%), Gaps = 49/283 (17%)

Query: 34  PTLGPQDVKVRIKALGICGSDVHHFKT-MRCAN----FIVKKPMVIGHECAGIIEEVGSE 88
           P  GP  V++ + A     + VH   T +R       F  + P V G E AG+++ VG  
Sbjct: 23  PVPGPGQVRIAVAA-----AGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPG 77

Query: 89  VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYK 148
           V    +G RV    G                             G  A   V      + 
Sbjct: 78  VDPAWLGRRVVAHTGR--------------------------AGGGYAELAVADVDSLHP 111

Query: 149 LPDNVSLEEGAMCEPLSVGVHAC---RRANVGPETNVMIMG-SGPIGLVTLLAARAFGAP 204
           +PD + LE       +  G  A      A + P   V++   +G +G + +  A+A GA 
Sbjct: 112 VPDGLDLEAAVAV--VHDGRTALGLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGAT 169

Query: 205 RIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKT 264
            +        + ++ R LGAD    V+ D    D      +   G G+ V  D VG    
Sbjct: 170 VVGAAGGPA-KTALVRALGAD----VAVDYTRPDWPDQVREALGGGGVTVVLDGVGGA-I 223

Query: 265 MSTALNATRPGGKVCLIGLAKTEMT-VALTPAAAREVDVIGIF 306
              AL    PGG+    G A  E T +    A  R V V+G+ 
Sbjct: 224 GRAALALLAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGLL 266

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score = 55.4 bits (134), Expect = 1e-08
 Identities = 67/297 (22%), Positives = 109/297 (36%), Gaps = 54/297 (18%)

Query: 22  GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPM--VIGHECA 79
           G+  LKI     P     DV +++ A G+  +D       R   +        ++G E A
Sbjct: 12  GVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADT----LQRQGKYPPPPGSSEILGLEVA 67

Query: 80  GIIEEVGSEVKSLEVGDRV-ALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHK 138
           G +E+VGS+VK  + GDRV AL PG           G Y                  A  
Sbjct: 68  GYVEDVGSDVKRFKEGDRVMALLPG-----------GGY------------------AEY 98

Query: 139 VVHPAKLCYKLPDNVSLEE-GAMCEPLSVGVHACRR-ANVGPETNVMIM--GSGPIGLVT 194
            V        +P   + EE  A+ E         ++  +V    +V+I    SG +G   
Sbjct: 99  AVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASG-VGTAA 157

Query: 195 LLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV 254
              A  +GA  II T  + +++   + L A        D E     V   +     G+++
Sbjct: 158 AQLAEKYGAATIITTSSE-EKVDFCKKLAA-IILIRYPDEEGFAPKV--KKLTGEKGVNL 213

Query: 255 SFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRST 311
             DCVG    +S         GK  + G         +  A   + +++ + R R++
Sbjct: 214 VLDCVG-GSYLSETAEVLAVDGKWIVYGF--------MGGAKVEKFNLLPLLRKRAS 261

Length = 334

>gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1

 Score = 54.9 bits (133), Expect = 2e-08
 Identities = 39/148 (26%), Positives = 59/148 (39%), Gaps = 34/148 (22%)

Query: 23  IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKK-PMVIGHECAGI 81
           +K L +    +P  GP +V ++++A  I  SD+     ++      K  P+  G E +G 
Sbjct: 15  VKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGF---LKGQYGSTKALPVPPGFEGSGT 71

Query: 82  IEEVG-SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVV 140
           +   G   +    +G RVA              AGSY               G+ A   V
Sbjct: 72  VVAAGGGPLAQSLIGKRVA------------FLAGSY---------------GTYAEYAV 104

Query: 141 HPAKLCYKLPDNVSLEEGAMC--EPLSV 166
             A+ C  LPD VS E+GA     PL+ 
Sbjct: 105 ADAQQCLPLPDGVSFEQGASSFVNPLTA 132

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase

 Score = 52.0 bits (125), Expect = 1e-07
 Identities = 57/252 (22%), Positives = 94/252 (37%), Gaps = 48/252 (19%)

Query: 34  PTLGPQDVKVRIKALGICGSDVHHFK----TMRCANFIVKKPMVIGHECAGIIEEVGSEV 89
              GP +V+++++A  +   D+   +    TM         P   G E +G++  VG  V
Sbjct: 3   APPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMP------PYPFTPGFEASGVVRAVGPHV 56

Query: 90  KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKL 149
             L VGD V    G                           + G  A  V  P     + 
Sbjct: 57  TRLAVGDEVIAGTG--------------------------ESMGGHATLVTVPEDQVVRK 90

Query: 150 PDNVSLEEGAMCEPLSVG---VHACRRANVGPETNVMIM-GSGPIGLVTLLAARAFGAPR 205
           P ++S EE   C    V    + A  RA +    +++I   +G  GL+ +  AR  GA  
Sbjct: 91  PASLSFEEA--CALPVVFLTVIDAFARAGLAKGEHILIQTATGGTGLMAVQLARLKGA-E 147

Query: 206 IIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTM 265
           I  T     +L   + LG           ED + ++ ++    G G+DV  + +  +  +
Sbjct: 148 IYATASSDDKLEYLKQLGVPHVINYVE--EDFEEEIMRLTG--GRGVDVVINTLSGE-AI 202

Query: 266 STALNATRPGGK 277
              LN   PGG+
Sbjct: 203 QKGLNCLAPGGR 214

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303

>gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional

 Score = 50.9 bits (122), Expect = 4e-07
 Identities = 62/230 (26%), Positives = 96/230 (41%), Gaps = 40/230 (17%)

Query: 37  GPQDVKVRIKALGICGSDVHHFKTMRCANFIVKK-PMVIGHECAGIIEEVGSEVKSLEVG 95
              +V+V  KA+GI   D +    +R   +     P  +G E AG++ +VGS VK ++VG
Sbjct: 27  AENEVQVENKAIGINYIDTY----IRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIKVG 82

Query: 96  DRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSL 155
           DRV           +    G+Y                S  H V  PA     LPD +S 
Sbjct: 83  DRVVY---------AQSALGAY----------------SSVHNV--PADKAAILPDAISF 115

Query: 156 EEGAMCEPLSVGVHACRRAN--VGP-ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 212
           E+ A      + V+   R    + P E  +    +G +GL+    A+A GA ++I T   
Sbjct: 116 EQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGS 174

Query: 213 VQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD 262
            Q+   A+  GA +        E++   V +I    G  + V +D VG D
Sbjct: 175 AQKAQRAKKAGAWQVINYRE--ENIVERVKEITG--GKKVRVVYDSVGKD 220

Length = 327

>gnl|CDD|222256 pfam13602, ADH_zinc_N_2, Zinc-binding dehydrogenase

 Score = 47.4 bits (113), Expect = 7e-07
 Identities = 38/136 (27%), Positives = 56/136 (41%), Gaps = 19/136 (13%)

Query: 222 LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI 281
           LGADE       I+    D    +   G G+DV  D VG + T+  AL A +PGG++  I
Sbjct: 1   LGADEV------IDYTTEDF--EEATAGEGVDVVLDTVGGE-TLLRALLALKPGGRLVSI 51

Query: 282 GLAKTEMTVALTPAAAREVDVIGIFRYRSTWPL-----CIEFLRSGKIDVKPLITHRFGF 336
           G     ++VA   A  R V  + +F               E + +GK+  +P+I   F  
Sbjct: 52  GGPDLLLSVAAK-AGGRGVRGVFLFPVSPGEAGADLAELAELVEAGKL--RPVIDRVFPL 108

Query: 337 TQKEIEDAFEISAQGG 352
              E  +A      G 
Sbjct: 109 E--EAAEAHRYLESGR 122

Length = 129

>gnl|CDD|130269 TIGR01202, bchC, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

 Score = 49.1 bits (117), Expect = 1e-06
 Identities = 71/342 (20%), Positives = 115/342 (33%), Gaps = 62/342 (18%)

Query: 20  LLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANF-IVKKPMVIGHEC 78
           L G   ++++   L    P D+ V I   GI       F       F  +  P+V G+E 
Sbjct: 7   LSGPNQIELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYES 66

Query: 79  AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHK 138
            G + E G +      GDRV +              GS         FG        + +
Sbjct: 67  VGRVVEAGPDTGFR-PGDRVFV-------------PGSNCYEDVRGLFGGA------SKR 106

Query: 139 VVHPA-KLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNV---MIMGSGPIGLVT 194
           +V PA ++C      +    G     L++   A R A  G E  V   +I+G G +G + 
Sbjct: 107 LVTPASRVC-----RLDPALGPQGALLALAATA-RHAVAGAEVKVLPDLIVGHGTLGRLL 160

Query: 195 LLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV 254
               +A G     + + + +R   A             ++ D + D  +           
Sbjct: 161 ARLTKAAGGSPPAVWETNPRRRDGA----------TGYEVLDPEKDPRR-------DYRA 203

Query: 255 SFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWP- 313
            +D  G    + T +     GG++ L G     +     PA  +E       R  + W  
Sbjct: 204 IYDASGDPSLIDTLVRRLAKGGEIVLAGFYTEPVNFDFVPAFMKEAR----LRIAAEWQP 259

Query: 314 ----LCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG 351
                  E + SG + +  LITH     Q+   DA E     
Sbjct: 260 GDLHAVRELIESGALSLDGLITH-----QRPASDAAEAYMTA 296

[Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 308

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score = 48.0 bits (115), Expect = 3e-06
 Identities = 62/276 (22%), Positives = 96/276 (34%), Gaps = 77/276 (27%)

Query: 27  KIQPYHLPTLGPQDVKVRIKALGICGSDVHH-----FKTMRCANFIVKKPMVIGHECAGI 81
            I    +P  GP +V V+ + +GI  SD++                VK P   G E  G 
Sbjct: 19  SIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPG-------VKPPFDCGFEGVGE 71

Query: 82  IEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVH 141
           +  VG  V   +VGD VA                               + G+ A   V 
Sbjct: 72  VVAVGEGVTDFKVGDAVAT-----------------------------MSFGAFAEYQVV 102

Query: 142 PAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAF 201
           PA+    +P+          E L + V     A++  E  V  M SG   LVT   A A 
Sbjct: 103 PARHAVPVPE-------LKPEVLPLLVSGL-TASIALE-EVGEMKSGETVLVT---AAAG 150

Query: 202 GAPRIIITDVDVQRLSIARN-----LGADETAKVSTDI----------EDVDTDVGKIQN 246
           G  +       VQ   +A         +DE A+    +          ED+      ++ 
Sbjct: 151 GTGQFA-----VQLAKLAGCHVIGTCSSDEKAEFLKSLGCDRPINYKTEDLGE---VLKK 202

Query: 247 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG 282
               G+DV ++ VG +    T ++     G++ +IG
Sbjct: 203 EYPKGVDVVYESVGGE-MFDTCVDNLALKGRLIVIG 237

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members

 Score = 47.5 bits (114), Expect = 5e-06
 Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 3/65 (4%)

Query: 34 PTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 93
          P  G +D+ VR++A+ +   D    K       +  +P ++G + +G++E VGSEV   +
Sbjct: 26 PVPGGRDLLVRVEAVSVNPVDT---KVRAGGAPVPGQPKILGWDASGVVEAVGSEVTLFK 82

Query: 94 VGDRV 98
          VGD V
Sbjct: 83 VGDEV 87

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336

>gnl|CDD|176252 cd08292, ETR_like_2, 2-enoyl thioester reductase (ETR) like proteins, child 2

 Score = 46.9 bits (112), Expect = 8e-06
 Identities = 64/246 (26%), Positives = 89/246 (36%), Gaps = 49/246 (19%)

Query: 23  IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHH--FKTMRCA-NFIVKKPMVIGHECA 79
              L+I     PT G  +V VR        S +H+    T+R    +  + P + G E  
Sbjct: 13  ADVLEIGEVPKPTPGAGEVLVRTTL-----SPIHNHDLWTIRGTYGYKPELPAIGGSEAV 67

Query: 80  GIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKV 139
           G+++ VG  VK L+VG RVA                                 G+ A   
Sbjct: 68  GVVDAVGEGVKGLQVGQRVA-------------------------VAPVH---GTWAEYF 99

Query: 140 VHPAKLCYKLPDNVSLEEGAM--CEPLSVGVHACRRANVGP-ETNVMIMGSGPIG--LVT 194
           V PA     LPD +S E  A     PLS  +       V P +  +     G +G  +  
Sbjct: 100 VAPADGLVPLPDGISDEVAAQLIAMPLS-ALMLLDFLGVKPGQWLIQNAAGGAVGKLVAM 158

Query: 195 LLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV 254
           L AAR      ++  D  V  L   R LG      VST+       V +     G+ I V
Sbjct: 159 LAAARGINVINLVRRDAGVAEL---RALGIGPV--VSTEQPGWQDKVREAAG--GAPISV 211

Query: 255 SFDCVG 260
           + D VG
Sbjct: 212 ALDSVG 217

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324

>gnl|CDD|176209 cd08247, AST1_like, AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

 Score = 46.9 bits (112), Expect = 8e-06
 Identities = 88/365 (24%), Positives = 149/365 (40%), Gaps = 79/365 (21%)

Query: 21  LGIKTLKIQPYHLPT-LGPQDVKVRIKALGICGSDVHHFKTMRCANFIVK-KPMVIGHEC 78
           L I T+K+    LP      ++ V++ A  +   D    K      F  K K   +G + 
Sbjct: 13  LTITTIKL---PLPNCYKDNEIVVKVHAAALNPVD---LKLYNSYTFHFKVKEKGLGRDY 66

Query: 79  AGIIEEVGSEVKS-LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAH 137
           +G+I +VGS V S  +VGD V                G Y        +G     G+L+ 
Sbjct: 67  SGVIVKVGSNVASEWKVGDEV---------------CGIY-----PHPYGG---QGTLSQ 103

Query: 138 K-VVHPAKLCYKL---PDNVSLEEGAMCEPLSVG-----VHACRRANVGPETNVMIMGSG 188
             +V P K    +   P+N+SLEE A   PL +G     +    +  +GP++ V+++G  
Sbjct: 104 YLLVDPKKDKKSITRKPENISLEEAA-AWPLVLGTAYQILEDLGQ-KLGPDSKVLVLGGS 161

Query: 189 -PIGLVTL-LAARAFGAPRIIITDVDVQRLSIARNLGADET-AKVSTDIEDVDTDVGKIQ 245
             +G   + LA   +    ++ T    +   + + LGAD      +     +   V  ++
Sbjct: 162 TSVGRFAIQLAKNHYNIGTVVGT-CSSRSAELNKKLGADHFIDYDAHSGVKLLKPV--LE 218

Query: 246 NAMGSG-IDVSFDCVG---FDKTMSTALNATRPGGK-VCLIGLAK---TEMTVALTP--- 294
           N  G G  D+  DCVG       +++ L      G  V ++G  K    + T        
Sbjct: 219 NVKGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPS 278

Query: 295 AAAREV-DVIGI--FRYR-------STWP-LCIEFLRSGKIDVKPLI--THRFGFTQKEI 341
           A AR++   +G+  + Y+       + W   C E +  GK  VKP I   + F    ++ 
Sbjct: 279 ANARKLFGSLGLWSYNYQFFLLDPNADWIEKCAELIADGK--VKPPIDSVYPF----EDY 332

Query: 342 EDAFE 346
           ++AFE
Sbjct: 333 KEAFE 337

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 352

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score = 45.3 bits (108), Expect = 3e-05
 Identities = 70/313 (22%), Positives = 115/313 (36%), Gaps = 61/313 (19%)

Query: 71  PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPP 130
           P V G+E  G + +VGS VKSL+ GD V                               P
Sbjct: 64  PAVGGNEGVGEVVKVGSGVKSLKPGDWVIP---------------------------LRP 96

Query: 131 TNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRR-----ANVGPETNVMIM 185
             G+     V PA    K+P++V  E+ A    LSV      R       + P   V+  
Sbjct: 97  GLGTWRTHAVVPADDLIKVPNDVDPEQAAT---LSVNPCTAYRLLEDFVKLQPGDWVIQN 153

Query: 186 G-SGPIGLVTLLAARAFGAPRIII------TDVDVQRLSIARNLGADETAKVSTDIEDVD 238
           G +  +G   +  A+  G   I +       +   +RL   + LGAD           + 
Sbjct: 154 GANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERL---KALGADHVLTEEELRSLLA 210

Query: 239 TDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGK-VCLIGLAKTEMTVALTPAAA 297
           T++ K  +A G    ++ +CVG  K+ +       PGG  V   G++   +TV  +    
Sbjct: 211 TELLK--SAPGGRPKLALNCVG-GKSATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIF 267

Query: 298 REVDVIGIF-------RYRSTWPLCIEFL----RSGKIDVKPLITHRFGFTQKEIEDAFE 346
           +++ + G +                +E L    R GK+   P +        +E +DA  
Sbjct: 268 KDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKL-KAPPVEKVTDDPLEEFKDALA 326

Query: 347 ISAQGGNAIKVMF 359
            + +GG   K + 
Sbjct: 327 NALKGGGGGKQVL 339

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|234026 TIGR02823, oxido_YhdH, putative quinone oxidoreductase, YhdH/YhfP family

 Score = 38.7 bits (91), Expect = 0.003
 Identities = 60/267 (22%), Positives = 90/267 (33%), Gaps = 81/267 (30%)

Query: 67  IVKK-PMVIGHECAGIIEEVGSEVKSLEVGDRVALEP-GISCGHCSLCKAGSYNLCPEMR 124
           +V+  PM+ G + AG +    SE      GD V +   G+   H                
Sbjct: 52  VVRSYPMIPGIDAAGTVVS--SEDPRFREGDEVIVTGYGLGVSH---------------- 93

Query: 125 FFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEG----------AMCEPLSVGVHACRRA 174
                  +G  +     PA     LP+ +SL E           A+       V A  R 
Sbjct: 94  -------DGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALS------VMALERN 140

Query: 175 NVGPETNVMIMGSGPIGLVT------------LLAARAFGAPRIIITDVDVQRLSIARNL 222
            + PE        GP+ LVT            +L+   +    ++ +    +     + L
Sbjct: 141 GLTPE-------DGPV-LVTGATGGVGSLAVAILSKLGY---EVVASTGKAEEEDYLKEL 189

Query: 223 GADETAKVSTDIEDVDTDVGKIQNAMGSGI-DVSFDCVGFDKTMSTALNATRPGGKVCLI 281
           GA E      D ED+    GK    +       + D VG   T++  L   + GG V   
Sbjct: 190 GASEV----IDREDLS-PPGK---PLEKERWAGAVDTVG-GHTLANVLAQLKYGGAVAAC 240

Query: 282 GLA---KTEMTVALTPAAAREVDVIGI 305
           GLA       TV   P   R V ++GI
Sbjct: 241 GLAGGPDLPTTVL--PFILRGVSLLGI 265

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc [Unknown function, Enzymes of unknown specificity]. Length = 323

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	361
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	100.0
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	100.0
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	100.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	100.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	100.0
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	100.0
PLN02740	381	Alcohol dehydrogenase-like	100.0
PLN02827	378	Alcohol dehydrogenase-like	100.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	100.0
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	100.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	100.0
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	100.0
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	100.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	100.0
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	100.0
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	100.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	100.0
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	100.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	100.0
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	100.0
PLN02702	364	L-idonate 5-dehydrogenase	100.0
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	100.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	100.0
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	100.0
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	100.0
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	100.0
PLN02514	357	cinnamyl-alcohol dehydrogenase	100.0
PRK10083	339	putative oxidoreductase; Provisional	100.0
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	100.0
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	100.0
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	100.0
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	100.0
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	100.0
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	100.0
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	100.0
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	100.0
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	100.0
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	100.0
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	100.0
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	100.0
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	100.0
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	100.0
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	100.0
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	100.0
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	100.0
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	100.0
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	100.0
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	100.0
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	100.0
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	100.0
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	100.0
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	100.0
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	100.0
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	100.0
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	100.0
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	100.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	100.0
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	100.0
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	100.0
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	100.0
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	100.0
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	100.0
PRK13771	334	putative alcohol dehydrogenase; Provisional	100.0
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	100.0
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	100.0
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	100.0
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	100.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	100.0
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	100.0
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	100.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	100.0
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	100.0
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	100.0
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	100.0
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	100.0
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	100.0
COG2130	340	Putative NADP-dependent oxidoreductases [General f	100.0
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	100.0
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	100.0
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	100.0
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	100.0
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	100.0
PTZ00354	334	alcohol dehydrogenase; Provisional	100.0
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	100.0
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	100.0
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	100.0
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	100.0
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	100.0
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	100.0
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	100.0
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	100.0
cd08252	336	AL_MDR Arginate lyase and other MDR family members	100.0
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	100.0
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	100.0
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	100.0
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	100.0
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	100.0
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	100.0
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	100.0
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	100.0
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	100.0
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	100.0
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	100.0
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	100.0
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	100.0
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.97
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	99.97
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.97
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	99.97
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	99.95
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	99.88
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.71
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	99.43
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	99.43
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	99.3
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	98.74
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.63
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	98.54
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	98.47
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.32
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	98.31
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.31
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	98.15
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	98.02
PLN02494	477	adenosylhomocysteinase	97.96
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	97.94
COG2264	300	PrmA Ribosomal protein L11 methylase [Translation,	97.92
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	97.91
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.9
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	97.86
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	97.86
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.84
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.79
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	97.75
PF06325	295	PrmA: Ribosomal protein L11 methyltransferase (Prm	97.75
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	97.73
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	97.72
PRK08324	681	short chain dehydrogenase; Validated	97.69
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	97.61
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	97.59
PTZ00075	476	Adenosylhomocysteinase; Provisional	97.59
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	97.58
PRK14967	223	putative methyltransferase; Provisional	97.51
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.5
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	97.49
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	97.31
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	97.28
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	97.27
PF11017	314	DUF2855: Protein of unknown function (DUF2855); In	97.23
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	97.23
PRK07402	196	precorrin-6B methylase; Provisional	97.23
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	97.17
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.14
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	97.12
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	97.1
PRK05993	277	short chain dehydrogenase; Provisional	97.1
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	97.08
TIGR00438	188	rrmJ cell division protein FtsJ.	97.05
PRK00312	212	pcm protein-L-isoaspartate O-methyltransferase; Re	97.05
COG0300	265	DltE Short-chain dehydrogenases of various substra	97.01
PRK12742	237	oxidoreductase; Provisional	97.01
COG2519	256	GCD14 tRNA(1-methyladenosine) methyltransferase an	96.9
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.9
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	96.89
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	96.88
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.83
PRK08317	241	hypothetical protein; Provisional	96.81
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	96.8
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	96.71
PLN03075	296	nicotianamine synthase; Provisional	96.69
PLN02233	261	ubiquinone biosynthesis methyltransferase	96.69
PRK01581	374	speE spermidine synthase; Validated	96.67
PRK04457	262	spermidine synthase; Provisional	96.67
PRK04266	226	fibrillarin; Provisional	96.67
PRK14103	255	trans-aconitate 2-methyltransferase; Provisional	96.65
COG3288	356	PntA NAD/NADP transhydrogenase alpha subunit [Ener	96.65
PRK08017	256	oxidoreductase; Provisional	96.64
PRK11207	197	tellurite resistance protein TehB; Provisional	96.6
PF01209	233	Ubie_methyltran: ubiE/COQ5 methyltransferase famil	96.6
PRK08287	187	cobalt-precorrin-6Y C(15)-methyltransferase; Valid	96.59
TIGR02752	231	MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone me	96.58
TIGR00446	264	nop2p NOL1/NOP2/sun family putative RNA methylase.	96.57
PRK06182	273	short chain dehydrogenase; Validated	96.56
PRK00811	283	spermidine synthase; Provisional	96.53
TIGR00138	181	gidB 16S rRNA methyltransferase GidB. GidB (glucos	96.51
PRK12828	239	short chain dehydrogenase; Provisional	96.51
PRK08618	325	ornithine cyclodeaminase; Validated	96.48
PRK05693	274	short chain dehydrogenase; Provisional	96.48
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.46
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	96.45
COG4122	219	Predicted O-methyltransferase [General function pr	96.45
PLN02244	340	tocopherol O-methyltransferase	96.44
PLN02781	234	Probable caffeoyl-CoA O-methyltransferase	96.43
PTZ00098	263	phosphoethanolamine N-methyltransferase; Provision	96.43
TIGR00417	270	speE spermidine synthase. the SpeE subunit of sper	96.43
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.43
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	96.4
PRK07326	237	short chain dehydrogenase; Provisional	96.39
PRK11036	255	putative S-adenosyl-L-methionine-dependent methylt	96.39
PRK08265	261	short chain dehydrogenase; Provisional	96.39
PLN02366	308	spermidine synthase	96.39
TIGR00477	195	tehB tellurite resistance protein TehB. Part of a	96.39
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.38
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	96.36
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	96.36
PRK01683	258	trans-aconitate 2-methyltransferase; Provisional	96.35
PLN03209	576	translocon at the inner envelope of chloroplast su	96.34
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	96.33
PRK08339	263	short chain dehydrogenase; Provisional	96.33
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	96.33
PRK04148	134	hypothetical protein; Provisional	96.31
PF08704	247	GCD14: tRNA methyltransferase complex GCD14 subuni	96.31
PLN02476	278	O-methyltransferase	96.31
TIGR00563	426	rsmB ribosomal RNA small subunit methyltransferase	96.26
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	96.24
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.22
PRK08267	260	short chain dehydrogenase; Provisional	96.21
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	96.21
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.18
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	96.17
PRK14903	431	16S rRNA methyltransferase B; Provisional	96.15
PRK00121	202	trmB tRNA (guanine-N(7)-)-methyltransferase; Revie	96.09
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	96.08
PRK06057	255	short chain dehydrogenase; Provisional	96.07
PRK10258	251	biotin biosynthesis protein BioC; Provisional	96.06
PRK06139	330	short chain dehydrogenase; Provisional	96.05
PRK07576	264	short chain dehydrogenase; Provisional	96.03
PRK07806	248	short chain dehydrogenase; Provisional	96.0
PF01596	205	Methyltransf_3: O-methyltransferase; InterPro: IPR	96.0
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	95.98
PLN02823	336	spermine synthase	95.97
PRK07574	385	formate dehydrogenase; Provisional	95.96
PRK03612	521	spermidine synthase; Provisional	95.95
PRK14901	434	16S rRNA methyltransferase B; Provisional	95.94
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	95.93
PRK06719	157	precorrin-2 dehydrogenase; Validated	95.93
PRK12939	250	short chain dehydrogenase; Provisional	95.93
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	95.93
PRK07060	245	short chain dehydrogenase; Provisional	95.89
PRK07109	334	short chain dehydrogenase; Provisional	95.89
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.89
PRK06949	258	short chain dehydrogenase; Provisional	95.88
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	95.88
PRK06500	249	short chain dehydrogenase; Provisional	95.87
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	95.87
PF08241	95	Methyltransf_11: Methyltransferase domain; InterPr	95.86
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	95.86
PRK05872	296	short chain dehydrogenase; Provisional	95.86
PRK07814	263	short chain dehydrogenase; Provisional	95.82
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	95.82
PRK06398	258	aldose dehydrogenase; Validated	95.8
PRK09186	256	flagellin modification protein A; Provisional	95.79
KOG1252	362	consensus Cystathionine beta-synthase and related	95.79
PTZ00146	293	fibrillarin; Provisional	95.79
PLN03139	386	formate dehydrogenase; Provisional	95.79
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	95.77
TIGR03215	285	ac_ald_DH_ac acetaldehyde dehydrogenase (acetylati	95.75
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	95.74
PRK06841	255	short chain dehydrogenase; Provisional	95.74
PRK13255	218	thiopurine S-methyltransferase; Reviewed	95.74
PRK10901	427	16S rRNA methyltransferase B; Provisional	95.73
PRK11188	209	rrmJ 23S rRNA methyltransferase J; Provisional	95.73
PRK07831	262	short chain dehydrogenase; Provisional	95.7
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	95.69
PRK06180	277	short chain dehydrogenase; Provisional	95.68
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.67
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	95.67
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	95.67
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	95.66
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	95.66
PRK06484	520	short chain dehydrogenase; Validated	95.66
KOG2017	427	consensus Molybdopterin synthase sulfurylase [Coen	95.65
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	95.62
PRK00536	262	speE spermidine synthase; Provisional	95.6
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.6
PRK14902	444	16S rRNA methyltransferase B; Provisional	95.58
PRK13243	333	glyoxylate reductase; Reviewed	95.57
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	95.57
PRK08300	302	acetaldehyde dehydrogenase; Validated	95.57
PRK14904	445	16S rRNA methyltransferase B; Provisional	95.57
PRK08177	225	short chain dehydrogenase; Provisional	95.56
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	95.55
PRK00216	239	ubiE ubiquinone/menaquinone biosynthesis methyltra	95.55
PRK08628	258	short chain dehydrogenase; Provisional	95.53
PRK12335	287	tellurite resistance protein TehB; Provisional	95.52
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	95.52
PRK09072	263	short chain dehydrogenase; Provisional	95.52
PRK05866	293	short chain dehydrogenase; Provisional	95.52
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	95.52
PRK08328	231	hypothetical protein; Provisional	95.52
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	95.51
PRK07774	250	short chain dehydrogenase; Provisional	95.5
PF01408	120	GFO_IDH_MocA: Oxidoreductase family, NAD-binding R	95.5
KOG1270	282	consensus Methyltransferases [Coenzyme transport a	95.49
PLN02589	247	caffeoyl-CoA O-methyltransferase	95.47
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	95.47
PRK07832	272	short chain dehydrogenase; Provisional	95.44
PRK08703	239	short chain dehydrogenase; Provisional	95.44
COG0031	300	CysK Cysteine synthase [Amino acid transport and m	95.44
PLN02490	340	MPBQ/MSBQ methyltransferase	95.44
PRK08589	272	short chain dehydrogenase; Validated	95.41
PRK08862	227	short chain dehydrogenase; Provisional	95.4
PRK12747	252	short chain dehydrogenase; Provisional	95.39
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	95.39
PF13847	152	Methyltransf_31: Methyltransferase domain; PDB: 3T	95.38
PRK06101	240	short chain dehydrogenase; Provisional	95.36
COG0421	282	SpeE Spermidine synthase [Amino acid transport and	95.36
TIGR00537	179	hemK_rel_arch HemK-related putative methylase. The	95.36
PRK07677	252	short chain dehydrogenase; Provisional	95.35
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	95.34
PF07991	165	IlvN: Acetohydroxy acid isomeroreductase, catalyti	95.34
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	95.33
PRK11933	470	yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF;	95.32
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	95.31
PRK06483	236	dihydromonapterin reductase; Provisional	95.31
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	95.29
PRK06128	300	oxidoreductase; Provisional	95.29
PRK06953	222	short chain dehydrogenase; Provisional	95.29
PLN02336	475	phosphoethanolamine N-methyltransferase	95.26
PRK07024	257	short chain dehydrogenase; Provisional	95.26
PRK07825	273	short chain dehydrogenase; Provisional	95.24
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	95.22
PRK12937	245	short chain dehydrogenase; Provisional	95.21
PLN02396	322	hexaprenyldihydroxybenzoate methyltransferase	95.2
PRK15116	268	sulfur acceptor protein CsdL; Provisional	95.2
COG0144	355	Sun tRNA and rRNA cytosine-C5-methylases [Translat	95.2
PRK06172	253	short chain dehydrogenase; Provisional	95.19
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	95.19
PRK07340	304	ornithine cyclodeaminase; Validated	95.17
PRK07478	254	short chain dehydrogenase; Provisional	95.17
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.16
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	95.15
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.15
TIGR00452	314	methyltransferase, putative. Known examples to dat	95.13
PRK15451	247	tRNA cmo(5)U34 methyltransferase; Provisional	95.11
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	95.11
PF13659	117	Methyltransf_26: Methyltransferase domain; PDB: 3G	95.11
COG2521	287	Predicted archaeal methyltransferase [General func	95.11
PRK06196	315	oxidoreductase; Provisional	95.09
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	95.07
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	95.07
cd05211	217	NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of	95.07
PRK05134	233	bifunctional 3-demethylubiquinone-9 3-methyltransf	95.05
PRK06484	520	short chain dehydrogenase; Validated	95.03
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	95.0
PRK07904	253	short chain dehydrogenase; Provisional	94.96
PRK05867	253	short chain dehydrogenase; Provisional	94.96
PRK07985	294	oxidoreductase; Provisional	94.93
PRK08264	238	short chain dehydrogenase; Validated	94.91
PRK07453	322	protochlorophyllide oxidoreductase; Validated	94.91
PRK06198	260	short chain dehydrogenase; Provisional	94.89
PRK07062	265	short chain dehydrogenase; Provisional	94.89
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	94.88
PRK12746	254	short chain dehydrogenase; Provisional	94.87
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.86
PRK12548	289	shikimate 5-dehydrogenase; Provisional	94.86
PRK07856	252	short chain dehydrogenase; Provisional	94.86
PRK07035	252	short chain dehydrogenase; Provisional	94.85
PRK15068	322	tRNA mo(5)U34 methyltransferase; Provisional	94.85
PRK05884	223	short chain dehydrogenase; Provisional	94.85
PLN02253	280	xanthoxin dehydrogenase	94.84
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	94.84
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	94.84
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.83
PRK06179	270	short chain dehydrogenase; Provisional	94.83
PRK05562	223	precorrin-2 dehydrogenase; Provisional	94.83
PRK14968	188	putative methyltransferase; Provisional	94.82
PRK06940	275	short chain dehydrogenase; Provisional	94.81
PRK07454	241	short chain dehydrogenase; Provisional	94.8
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	94.79
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	94.79
PRK08226	263	short chain dehydrogenase; Provisional	94.79
PLN02780	320	ketoreductase/ oxidoreductase	94.76
PRK07890	258	short chain dehydrogenase; Provisional	94.76
PRK06701	290	short chain dehydrogenase; Provisional	94.76
PRK11088	272	rrmA 23S rRNA methyltransferase A; Provisional	94.75
TIGR01318	467	gltD_gamma_fam glutamate synthase small subunit fa	94.75
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	94.73
PRK05854	313	short chain dehydrogenase; Provisional	94.72
PLN02928	347	oxidoreductase family protein	94.69
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	94.69
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	94.68
PRK12829	264	short chain dehydrogenase; Provisional	94.68
KOG0725	270	consensus Reductases with broad range of substrate	94.66
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	94.64
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	94.63
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	94.63
PRK03659	601	glutathione-regulated potassium-efflux system prot	94.62
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	94.62
PRK07523	255	gluconate 5-dehydrogenase; Provisional	94.61
PRK05876	275	short chain dehydrogenase; Provisional	94.61
PRK06124	256	gluconate 5-dehydrogenase; Provisional	94.6
PRK12743	256	oxidoreductase; Provisional	94.6
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	94.6
PRK10669	558	putative cation:proton antiport protein; Provision	94.57
TIGR02072	240	BioC biotin biosynthesis protein BioC. This enzyme	94.56
PRK06141	314	ornithine cyclodeaminase; Validated	94.54
PRK08340	259	glucose-1-dehydrogenase; Provisional	94.53
PRK12744	257	short chain dehydrogenase; Provisional	94.53
PRK09291	257	short chain dehydrogenase; Provisional	94.52
TIGR01934	223	MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis	94.5
TIGR00091	194	tRNA (guanine-N(7)-)-methyltransferase. In E. coli	94.5
PRK05717	255	oxidoreductase; Validated	94.49
PRK06194	287	hypothetical protein; Provisional	94.48
TIGR02992	326	ectoine_eutC ectoine utilization protein EutC. Mem	94.47
PRK12480	330	D-lactate dehydrogenase; Provisional	94.46
COG0334	411	GdhA Glutamate dehydrogenase/leucine dehydrogenase	94.44
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	94.43
PRK13256	226	thiopurine S-methyltransferase; Reviewed	94.42
PRK13403	335	ketol-acid reductoisomerase; Provisional	94.41
PRK06125	259	short chain dehydrogenase; Provisional	94.39
PLN03013	429	cysteine synthase	94.39
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	94.38
PRK08643	256	acetoin reductase; Validated	94.38
PRK06482	276	short chain dehydrogenase; Provisional	94.36
PRK08213	259	gluconate 5-dehydrogenase; Provisional	94.32
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	94.32
TIGR01532	325	E4PD_g-proteo D-erythrose-4-phosphate dehydrogenas	94.31
PRK12809	639	putative oxidoreductase Fe-S binding subunit; Revi	94.3
PRK06138	252	short chain dehydrogenase; Provisional	94.3
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	94.3
PRK05875	276	short chain dehydrogenase; Provisional	94.3
PRK03562	621	glutathione-regulated potassium-efflux system prot	94.28
PRK12938	246	acetyacetyl-CoA reductase; Provisional	94.27
PRK07074	257	short chain dehydrogenase; Provisional	94.26
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	94.23
PRK08223	287	hypothetical protein; Validated	94.23
COG4106	257	Tam Trans-aconitate methyltransferase [General fun	94.23
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	94.22
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	94.21
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	94.21
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	94.2
PRK05479	330	ketol-acid reductoisomerase; Provisional	94.2
PRK08277	278	D-mannonate oxidoreductase; Provisional	94.2
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	94.19
PLN00203	519	glutamyl-tRNA reductase	94.16
PRK08085	254	gluconate 5-dehydrogenase; Provisional	94.14
PRK07067	257	sorbitol dehydrogenase; Provisional	94.08
PRK08263	275	short chain dehydrogenase; Provisional	94.07
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	94.07
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	94.06
PRK09242	257	tropinone reductase; Provisional	94.05
PRK07411	390	hypothetical protein; Validated	94.01
PRK10538	248	malonic semialdehyde reductase; Provisional	94.01
CHL00194	317	ycf39 Ycf39; Provisional	94.01
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.99
PRK06914	280	short chain dehydrogenase; Provisional	93.98
KOG1661	237	consensus Protein-L-isoaspartate(D-aspartate) O-me	93.98
PRK12769	654	putative oxidoreductase Fe-S binding subunit; Revi	93.97
KOG0069	336	consensus Glyoxylate/hydroxypyruvate reductase (D-	93.97
PRK12367	245	short chain dehydrogenase; Provisional	93.97
PRK13303	265	L-aspartate dehydrogenase; Provisional	93.96
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	93.96
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	93.95
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	93.93
PRK07063	260	short chain dehydrogenase; Provisional	93.91
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	93.89
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	93.89
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	93.88
PRK07417	279	arogenate dehydrogenase; Reviewed	93.88
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	93.85
COG4262	508	Predicted spermidine synthase with an N-terminal m	93.83
PRK06197	306	short chain dehydrogenase; Provisional	93.83
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.78
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.77
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	93.77
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	93.76
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	93.76
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	93.75
PRK06436	303	glycerate dehydrogenase; Provisional	93.75
COG0569	225	TrkA K+ transport systems, NAD-binding component [	93.75
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	93.74
PRK06181	263	short chain dehydrogenase; Provisional	93.7
cd02440	107	AdoMet_MTases S-adenosylmethionine-dependent methy	93.69
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	93.68
PRK06720	169	hypothetical protein; Provisional	93.68
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	93.64
PRK08291	330	ectoine utilization protein EutC; Validated	93.63
PRK07097	265	gluconate 5-dehydrogenase; Provisional	93.63
PRK09134	258	short chain dehydrogenase; Provisional	93.61
PF05175	170	MTS: Methyltransferase small domain; InterPro: IPR	93.58
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	93.57
PRK06932	314	glycerate dehydrogenase; Provisional	93.56
PRK06114	254	short chain dehydrogenase; Provisional	93.54

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=7.3e-63  Score=422.49  Aligned_cols=347  Identities=50%  Similarity=0.876  Sum_probs=318.2

Q ss_pred             CcccceEEEEeeCCceEEEEecCCCC-CCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCC
Q 018075           11 DKNQNMAAWLLGIKTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEV   89 (361)
Q Consensus        11 ~~~~~~~~~~~~~~~l~~~~~~~p~~-~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   89 (361)
                      |..+++++++.+++++++++.|.|++ .|+||+|++.++|||.+|+|.+.....+.+..+.|+++|||.+|+|.++|+.|
T Consensus         1 ~~~~~~A~vl~g~~di~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~V   80 (354)
T KOG0024|consen    1 MAADNLALVLRGKGDIRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEV   80 (354)
T ss_pred             CCcccceeEEEccCceeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhcccc
Confidence            45678999999999999999999997 99999999999999999999998877777767899999999999999999999


Q ss_pred             CCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHHHHH
Q 018075           90 KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVH  169 (361)
Q Consensus        90 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~  169 (361)
                      +++++||||+..|..+|+.|.+|..|++++||.+.|.+.+..+|++++|++.++++|+|+|++++++++|++.+++++||
T Consensus        81 k~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~ePLsV~~H  160 (354)
T KOG0024|consen   81 KHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIEPLSVGVH  160 (354)
T ss_pred             cccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhcccccchhhhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhh-c
Q 018075          170 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA-M  248 (361)
Q Consensus       170 ~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~  248 (361)
                      +.+++++++|++|||+|+|++|+.+...||.+|+..|+.++..+.|++++++||++.+....... +.....+.+... +
T Consensus       161 Acr~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~-~~~~~~~~v~~~~g  239 (354)
T KOG0024|consen  161 ACRRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKS-SPQELAELVEKALG  239 (354)
T ss_pred             hhhhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccc-cHHHHHHHHHhhcc
Confidence            99999999999999999999999999999999999999999999999999999999887643322 333333333332 2


Q ss_pred             CCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecCCC-cHHHHHHHHHcCCCCCC
Q 018075          249 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRS-TWPLCIEFLRSGKIDVK  327 (361)
Q Consensus       249 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~l~~g~~~~~  327 (361)
                      ...+|++|||+|.....+.++..++.+|+++++|+.....+++......++++++|++.+.+ .+..+++++++|+++.+
T Consensus       240 ~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~~~fpi~~v~~kE~~~~g~fry~~~~y~~ai~li~sGki~~k  319 (354)
T KOG0024|consen  240 KKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAEEIQFPIIDVALKEVDLRGSFRYCNGDYPTAIELVSSGKIDVK  319 (354)
T ss_pred             ccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCCccccChhhhhhheeeeeeeeeeccccHHHHHHHHHcCCcCch
Confidence            35699999999999899999999999999999999999999999999999999999999955 99999999999999999


Q ss_pred             CceEEEecCChhhHHHHHHHHhcCCC-ceEEEEe
Q 018075          328 PLITHRFGFTQKEIEDAFEISAQGGN-AIKVMFN  360 (361)
Q Consensus       328 ~~~~~~~~l~~~~~~~a~~~l~~~~~-~gkvvi~  360 (361)
                      +++++.|++  +++.+|++.+..++. .-|+++.
T Consensus       320 ~lIT~r~~~--~~~~eAf~~~~~~~~~~iKv~i~  351 (354)
T KOG0024|consen  320 PLITHRYKF--DDADEAFETLQHGEEGVIKVIIT  351 (354)
T ss_pred             hheeccccc--chHHHHHHHHHhCcCCceEEEEe
Confidence            999999999  999999999887753 5677764

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=6e-62  Score=430.28  Aligned_cols=331  Identities=32%  Similarity=0.511  Sum_probs=296.0

Q ss_pred             cccceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCC
Q 018075           12 KNQNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVK   90 (361)
Q Consensus        12 ~~~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   90 (361)
                      +++|+++++.+. ++++++|++.|+|+++||+|+|+|+|+|++|+|.++|.+..   ..+|+++|||.+|+|+++|++|+
T Consensus         1 ~~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~---~~~P~ipGHEivG~V~~vG~~V~   77 (339)
T COG1064           1 MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPV---PKLPLIPGHEIVGTVVEVGEGVT   77 (339)
T ss_pred             CcceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCC---CCCCccCCcceEEEEEEecCCCc
Confidence            357788888866 45999999999999999999999999999999999987643   35899999999999999999999


Q ss_pred             CCCCCCEEEe-cCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHH
Q 018075           91 SLEVGDRVAL-EPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGV  168 (361)
Q Consensus        91 ~~~~Gd~V~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~  168 (361)
                      +|++||||.+ +...+|++|.+|+.|+.++|++..+.+. ..+|+|+||+++++++++++|+++++++||.+ +...|+|
T Consensus        78 ~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy-~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y  156 (339)
T COG1064          78 GLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGY-TTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTY  156 (339)
T ss_pred             cCCCCCEEEecCccCCCCCCccccCcccccCCCccccce-eecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEe
Confidence            9999999999 7778999999999999999999766664 48999999999999999999999999999955 5788899


Q ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhc
Q 018075          169 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       169 ~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      ++|++.+++||++|+|.|.|++|++++|+|+.+|+ .|++++++++|.+++++||++++++..  +.+..+.+++     
T Consensus       157 ~alk~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~~~--~~~~~~~~~~-----  228 (339)
T COG1064         157 RALKKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVINSS--DSDALEAVKE-----  228 (339)
T ss_pred             eehhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEEcC--CchhhHHhHh-----
Confidence            99999999999999999999999999999999998 799999999999999999999998743  3444444432     


Q ss_pred             CCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCC-CC-cceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCC
Q 018075          249 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK-TE-MTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKID  325 (361)
Q Consensus       249 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~-~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~  325 (361)
                        .+|++||+++ +.+++.+++.|+++|+++++|... .. ..++...++++++++.|+... +.++++++++..+|++ 
T Consensus       229 --~~d~ii~tv~-~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~~d~~e~l~f~~~g~I-  304 (339)
T COG1064         229 --IADAIIDTVG-PATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTRADLEEALDFAAEGKI-  304 (339)
T ss_pred             --hCcEEEECCC-hhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCCHHHHHHHHHHHHhCCc-
Confidence              3999999999 779999999999999999999874 33 446677789999999999887 7899999999999999 


Q ss_pred             CCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          326 VKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       326 ~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                       ++.+.+.+++  +++++|++.|++++..|++||++
T Consensus       305 -kp~i~e~~~l--~~in~A~~~m~~g~v~gR~Vi~~  337 (339)
T COG1064         305 -KPEILETIPL--DEINEAYERMEKGKVRGRAVIDM  337 (339)
T ss_pred             -eeeEEeeECH--HHHHHHHHHHHcCCeeeEEEecC
Confidence             6666567889  99999999999999999999874

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=100.00  E-value=9.5e-54  Score=394.71  Aligned_cols=337  Identities=29%  Similarity=0.561  Sum_probs=291.3

Q ss_pred             ccceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCC
Q 018075           13 NQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL   92 (361)
Q Consensus        13 ~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   92 (361)
                      -.++++++.+++.+++++++.| ++++||||||.++|+|++|++.+.+...+.....+|.++|||++|+|+++  ++++|
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~~   79 (343)
T PRK09880          3 VKTQSCVVAGKKDVAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSGL   79 (343)
T ss_pred             ccceEEEEecCCceEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCccC
Confidence            3567888889999999999997 68999999999999999999977532222222467999999999999999  78899


Q ss_pred             CCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCC----CCCCceeEEEEecCCceEECCCCCCcccccccchhHHHH
Q 018075           93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP----PTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGV  168 (361)
Q Consensus        93 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~  168 (361)
                      ++||||+..+..+|++|.+|+.|++++|++..+++..    ...|+|+||++++++.++++|++++++++++..++++||
T Consensus        80 ~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~~a~  159 (343)
T PRK09880         80 KEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMAFAEPLAVAI  159 (343)
T ss_pred             CCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHHhhcHHHHHH
Confidence            9999999999999999999999999999998776531    247999999999999999999999998877777899999


Q ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhc
Q 018075          169 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       169 ~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      +++++....+|++|||+|+|++|++++|+|+.+|+++|+++++++++.++++++|++.++++.+  .++.+    +... 
T Consensus       160 ~al~~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~--~~~~~----~~~~-  232 (343)
T PRK09880        160 HAAHQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQN--DDLDH----YKAE-  232 (343)
T ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCc--ccHHH----Hhcc-
Confidence            9998877789999999999999999999999999977899999999999999999999887543  33332    2221 


Q ss_pred             CCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCC
Q 018075          249 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKP  328 (361)
Q Consensus       249 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~~~~~~  328 (361)
                      ..++|++||++|++..++.+++.|+++|+++.+|......+++...+..+++++.++....++++++++++++|++++.+
T Consensus       233 ~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~l~~~g~i~~~~  312 (343)
T PRK09880        233 KGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGAPPEFPMMTLIVKEISLKGSFRFTEEFNTAVSWLANGVINPLP  312 (343)
T ss_pred             CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHHhCCcEEEEEeeccccHHHHHHHHHcCCCCchh
Confidence            23699999999987789999999999999999997655455666677889999999887778899999999999998778


Q ss_pred             ceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          329 LITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       329 ~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      .++++|+|  +++++|++.+.++...||+++..
T Consensus       313 ~i~~~~~l--~~~~~A~~~~~~~~~~gKvvl~~  343 (343)
T PRK09880        313 LLSAEYPF--TDLEEALIFAGDKTQAAKVQLVF  343 (343)
T ss_pred             heEEEEEH--HHHHHHHHHHhcCCCceEEEEeC
Confidence            88999999  99999999999988889999864

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=100.00  E-value=3e-54  Score=372.81  Aligned_cols=338  Identities=30%  Similarity=0.471  Sum_probs=291.7

Q ss_pred             ccceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCC
Q 018075           13 NQNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS   91 (361)
Q Consensus        13 ~~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   91 (361)
                      +++++|++.++ ++|+++|+++++|++||||||+.|+|+|++|.+..+|.++    ..+|+++|||++|+|++||++|++
T Consensus         1 mk~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p----~~~P~vLGHEgAGiVe~VG~gVt~   76 (366)
T COG1062           1 MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDP----EGFPAVLGHEGAGIVEAVGEGVTS   76 (366)
T ss_pred             CCceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCC----CCCceecccccccEEEEecCCccc
Confidence            36788888876 7999999999999999999999999999999999887543    358999999999999999999999


Q ss_pred             CCCCCEEEecCCcCCCCCccccCCCCCCCCCccccC---------C-----------CCCCCceeEEEEecCCceEECCC
Q 018075           92 LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFG---------S-----------PPTNGSLAHKVVHPAKLCYKLPD  151 (361)
Q Consensus        92 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-----------~~~~g~~~~~~~~~~~~~~~vP~  151 (361)
                      +++||.|+..+..+||+|.+|..|++++|..+.-..         .           ..-.++|+||.++++..++++++
T Consensus        77 vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~  156 (366)
T COG1062          77 VKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDP  156 (366)
T ss_pred             cCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCC
Confidence            999999999999999999999999999999532110         0           11235899999999999999999


Q ss_pred             CCCcccccccc-hhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEee
Q 018075          152 NVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAK  229 (361)
Q Consensus       152 ~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~  229 (361)
                      +.+++.++++- ...|.+.+. +.+++++|++|.|+|.|++|+++||-|+..|+.++|+++.+++|++++++||+++.++
T Consensus       157 ~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn  236 (366)
T COG1062         157 DAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVN  236 (366)
T ss_pred             CCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeec
Confidence            99999999885 566777765 5699999999999999999999999999999999999999999999999999999887


Q ss_pred             cCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhh-hcCcEEEEeecC
Q 018075          230 VSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAA-AREVDVIGIFRY  308 (361)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~i~~~~~~  308 (361)
                      ..+. .+..+.+.+++   ++++|++|||+|....+++++.++.++|+.+.+|.......++.+.+. ....+++|+...
T Consensus       237 ~~~~-~~vv~~i~~~T---~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G  312 (366)
T COG1062         237 PKEV-DDVVEAIVELT---DGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFG  312 (366)
T ss_pred             chhh-hhHHHHHHHhc---CCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeeccceEEEEeec
Confidence            4322 14666665554   669999999999999999999999999999999988766666665542 233778887654


Q ss_pred             ----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          309 ----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       309 ----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                          +.++..+++++.+|++++.+++++.++|  +|+++|+++|.+|+.. |.||.+
T Consensus       313 ~~~p~~diP~lv~~y~~Gkl~~d~lvt~~~~L--e~INeaf~~m~~G~~I-R~Vi~~  366 (366)
T COG1062         313 GARPRSDIPRLVDLYMAGKLPLDRLVTHTIPL--EDINEAFDLMHEGKSI-RSVIRF  366 (366)
T ss_pred             CCccccchhHHHHHHHcCCCchhHHhhccccH--HHHHHHHHHHhCCcee-eEEecC
Confidence                7799999999999999999999999999  9999999999999664 666653

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=100.00  E-value=2.2e-50  Score=372.19  Aligned_cols=335  Identities=33%  Similarity=0.599  Sum_probs=286.0

Q ss_pred             ceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCC
Q 018075           15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEV   94 (361)
Q Consensus        15 ~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   94 (361)
                      |+++++.+++.++++++|.|+++++||+|||.++|+|++|++.+.+....  +...|.++|||++|+|+++|++|+++++
T Consensus         1 mka~~~~~~~~l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~   78 (339)
T cd08239           1 MRGAVFPGDRTVELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRA--PAYQGVIPGHEPAGVVVAVGPGVTHFRV   78 (339)
T ss_pred             CeEEEEecCCceEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCc--cCCCCceeccCceEEEEEECCCCccCCC
Confidence            46677778889999999999999999999999999999999887654211  1235889999999999999999999999


Q ss_pred             CCEEEecCCcCCCCCccccCCCCCCCCCccc-cCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHHH
Q 018075           95 GDRVALEPGISCGHCSLCKAGSYNLCPEMRF-FGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACR  172 (361)
Q Consensus        95 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l~  172 (361)
                      ||+|+..+...|++|..|+.|+++.|++... ++ ....|+|+||+.++.+.++++|+++++++|+.+ .++.+||++++
T Consensus        79 Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g-~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~  157 (339)
T cd08239          79 GDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYG-WNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHALR  157 (339)
T ss_pred             CCEEEECCCCCCCCChhhhCcCcccCcCcccccc-cCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHH
Confidence            9999999889999999999999999997654 22 235799999999999999999999999998866 47889999998


Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCc
Q 018075          173 RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       173 ~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      ...+++|++|||+|+|++|++++|+|+.+|++.|+++++++++.++++++|++.++++..  .+ .+.+.++.  .+.++
T Consensus       158 ~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~--~~-~~~~~~~~--~~~~~  232 (339)
T cd08239         158 RVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQ--DD-VQEIRELT--SGAGA  232 (339)
T ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCc--ch-HHHHHHHh--CCCCC
Confidence            888999999999999999999999999999965888999999999999999998877543  23 33343332  34689


Q ss_pred             cEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceec-hHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCCCce
Q 018075          253 DVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVAL-TPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLI  330 (361)
Q Consensus       253 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~  330 (361)
                      |++||++|+...++.++++|+++|+++.+|..... .+.. ..+..+++++.+++.. .++++++++++++|++++.+.+
T Consensus       233 d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i  311 (339)
T cd08239         233 DVAIECSGNTAARRLALEAVRPWGRLVLVGEGGEL-TIEVSNDLIRKQRTLIGSWYFSVPDMEECAEFLARHKLEVDRLV  311 (339)
T ss_pred             CEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCc-ccCcHHHHHhCCCEEEEEecCCHHHHHHHHHHHHcCCCChhHeE
Confidence            99999999886778899999999999999965432 2332 3567789999998876 5789999999999999888889


Q ss_pred             EEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          331 THRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       331 ~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      +++|+|  +++++|++.++++. .||+|+++
T Consensus       312 ~~~~~l--~~~~~a~~~~~~~~-~gKvvi~~  339 (339)
T cd08239         312 THRFGL--DQAPEAYALFAQGE-SGKVVFVF  339 (339)
T ss_pred             EEEecH--HHHHHHHHHHHcCC-ceEEEEeC
Confidence            999999  99999999998875 79999875

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=5.1e-51  Score=348.77  Aligned_cols=336  Identities=25%  Similarity=0.397  Sum_probs=284.4

Q ss_pred             CcccceEEEEeeC-C--ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCC
Q 018075           11 DKNQNMAAWLLGI-K--TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGS   87 (361)
Q Consensus        11 ~~~~~~~~~~~~~-~--~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   87 (361)
                      .|+++++.....+ +  ++++.++++|+++++||+|++.|+|+|++|++.+.|.+..   .+.|.++|||.+|+|+++|+
T Consensus         6 ~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~---s~~PlV~GHEiaG~VvkvGs   82 (360)
T KOG0023|consen    6 IPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGL---SKYPLVPGHEIAGVVVKVGS   82 (360)
T ss_pred             CchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCc---ccCCccCCceeeEEEEEECC
Confidence            3566666555544 3  6788999999999999999999999999999999886533   58899999999999999999


Q ss_pred             CCCCCCCCCEEEecCC-cCCCCCccccCCCCCCCCCccccC------CCCCCCceeEEEEecCCceEECCCCCCcccccc
Q 018075           88 EVKSLEVGDRVALEPG-ISCGHCSLCKAGSYNLCPEMRFFG------SPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAM  160 (361)
Q Consensus        88 ~v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~  160 (361)
                      +|++|++||||-+-.. .+|+.|.+|..|...+||++-+..      +...+|+|++|+++++.+++++|++++.+.||.
T Consensus        83 ~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~aAP  162 (360)
T KOG0023|consen   83 NVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASAAP  162 (360)
T ss_pred             CcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhccc
Confidence            9999999999988543 589999999999999999643322      234577799999999999999999999999995


Q ss_pred             c-chhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh-hHHHHHHHcCCCEEeecCCCccchh
Q 018075          161 C-EPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV-QRLSIARNLGADETAKVSTDIEDVD  238 (361)
Q Consensus       161 ~-~~~~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~-~~~~~~~~lg~~~~~~~~~~~~~~~  238 (361)
                      + ....|.|..|.+.++.||+++-|.|+|++|.+++|+||++|. +|++++++. +|.++++.||++..++..+ +.+  
T Consensus       163 lLCaGITvYspLk~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~~~LGAd~fv~~~~-d~d--  238 (360)
T KOG0023|consen  163 LLCAGITVYSPLKRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAIKSLGADVFVDSTE-DPD--  238 (360)
T ss_pred             hhhcceEEeehhHHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHHHhcCcceeEEecC-CHH--
Confidence            5 466778999999899999999999987799999999999999 688887776 7778888899999887532 234  


Q ss_pred             HHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-CCcHHHHHH
Q 018075          239 TDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIE  317 (361)
Q Consensus       239 ~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~  317 (361)
                       +++.+.++...++|-|.+.  ..-.++.++..|+++|++|++|.+.....++..++.++.+.+.|+... +.+.+++++
T Consensus       239 -~~~~~~~~~dg~~~~v~~~--a~~~~~~~~~~lk~~Gt~V~vg~p~~~~~~~~~~lil~~~~I~GS~vG~~ket~E~Ld  315 (360)
T KOG0023|consen  239 -IMKAIMKTTDGGIDTVSNL--AEHALEPLLGLLKVNGTLVLVGLPEKPLKLDTFPLILGRKSIKGSIVGSRKETQEALD  315 (360)
T ss_pred             -HHHHHHHhhcCcceeeeec--cccchHHHHHHhhcCCEEEEEeCcCCcccccchhhhcccEEEEeeccccHHHHHHHHH
Confidence             4444544445666766665  334789999999999999999998887788888999999999999876 889999999


Q ss_pred             HHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          318 FLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       318 ~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      +.+++.+  +..+ +..++  +++++|+++|++++..+|.|+++
T Consensus       316 f~a~~~i--k~~I-E~v~~--~~v~~a~erm~kgdV~yRfVvD~  354 (360)
T KOG0023|consen  316 FVARGLI--KSPI-ELVKL--SEVNEAYERMEKGDVRYRFVVDV  354 (360)
T ss_pred             HHHcCCC--cCce-EEEeh--hHHHHHHHHHHhcCeeEEEEEEc
Confidence            9999999  5545 66788  99999999999999999999874

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=100.00  E-value=1.5e-49  Score=370.48  Aligned_cols=326  Identities=33%  Similarity=0.516  Sum_probs=278.6

Q ss_pred             CCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecC
Q 018075           23 IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEP  102 (361)
Q Consensus        23 ~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~  102 (361)
                      ++.++++++|.|+|+++||+|||.++|+|++|++...|..    +..+|+++|||++|+|+++|++++++++||||++.+
T Consensus        18 ~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~----~~~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~   93 (371)
T cd08281          18 SRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDR----PRPLPMALGHEAAGVVVEVGEGVTDLEVGDHVVLVF   93 (371)
T ss_pred             CCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCC----CCCCCccCCccceeEEEEeCCCCCcCCCCCEEEEcc
Confidence            3679999999999999999999999999999999887643    235689999999999999999999999999999988


Q ss_pred             CcCCCCCccccCCCCCCCCCccccCC--------------------CCCCCceeEEEEecCCceEECCCCCCcccccccc
Q 018075          103 GISCGHCSLCKAGSYNLCPEMRFFGS--------------------PPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE  162 (361)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~  162 (361)
                      ..+|+.|..|+.|++++|++...+..                    ....|+|+||+.++++.++++|+++++++|+++.
T Consensus        94 ~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~~lP~~l~~~~aa~~~  173 (371)
T cd08281          94 VPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFG  173 (371)
T ss_pred             CCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccceEECCCCCChHHhhhhc
Confidence            78999999999999999987533210                    0013799999999999999999999999998664


Q ss_pred             -hhHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHH
Q 018075          163 -PLSVGVHACR-RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTD  240 (361)
Q Consensus       163 -~~~~a~~~l~-~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~  240 (361)
                       ++.+||+++. ..++++|++|||+|+|++|++++|+||..|+..|++++.+++|.++++++|++.++++.+  .++.+.
T Consensus       174 ~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~--~~~~~~  251 (371)
T cd08281         174 CAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATATVNAGD--PNAVEQ  251 (371)
T ss_pred             chHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCceEeCCCc--hhHHHH
Confidence             6788998874 588999999999999999999999999999966889999999999999999998877532  455555


Q ss_pred             HHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC--CcceechHhhhcCcEEEEeecC----CCcHHH
Q 018075          241 VGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT--EMTVALTPAAAREVDVIGIFRY----RSTWPL  314 (361)
Q Consensus       241 ~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~----~~~~~~  314 (361)
                      ++++.   +.++|++|||+|.+..++.++++++++|+++.+|....  ...++...++.+++++.+++..    .+++..
T Consensus       252 i~~~~---~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~  328 (371)
T cd08281         252 VRELT---GGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEERTLKGSYMGSCVPRRDIPR  328 (371)
T ss_pred             HHHHh---CCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcCCEEEEEecCCCChHHHHHH
Confidence            55443   34899999999987789999999999999999996543  2345555678899999998764    467889


Q ss_pred             HHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 018075          315 CIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF  359 (361)
Q Consensus       315 ~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi  359 (361)
                      +++++++|++++.+.++++|+|  +++++|++.+.+++..+|+++
T Consensus       329 ~~~l~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~~~~~vi~  371 (371)
T cd08281         329 YLALYLSGRLPVDKLLTHRLPL--DEINEGFDRLAAGEAVRQVIL  371 (371)
T ss_pred             HHHHHHcCCCCchhheeeeecH--HHHHHHHHHHhCCCceeeeeC
Confidence            9999999999887889999999  999999999999988877663

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>PLN02740 Alcohol dehydrogenase-like

Probab=100.00  E-value=2.3e-49  Score=370.17  Aligned_cols=343  Identities=26%  Similarity=0.421  Sum_probs=285.3

Q ss_pred             CcccceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCC
Q 018075           11 DKNQNMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEV   89 (361)
Q Consensus        11 ~~~~~~~~~~~~~~-~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   89 (361)
                      .+.+|+++++.+++ ++.++++|.|+|+++||+|||.++|+|++|++.+.|...  ....+|+++|||++|+|+++|+++
T Consensus         7 ~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~--~~~~~p~i~GhE~~G~V~~vG~~v   84 (381)
T PLN02740          7 KVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENE--AQRAYPRILGHEAAGIVESVGEGV   84 (381)
T ss_pred             cceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCc--ccCCCCccccccceEEEEEeCCCC
Confidence            45677888888775 589999999999999999999999999999998877532  123568999999999999999999


Q ss_pred             CCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCC-----------------------CCCCCceeEEEEecCCce
Q 018075           90 KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS-----------------------PPTNGSLAHKVVHPAKLC  146 (361)
Q Consensus        90 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~g~~~~~~~~~~~~~  146 (361)
                      ++|++||||++.+..+|+.|.+|..|++..|+++...+.                       ....|+|+||++++.+.+
T Consensus        85 ~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~  164 (381)
T PLN02740         85 EDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACV  164 (381)
T ss_pred             CcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHe
Confidence            999999999999889999999999999999998653211                       012599999999999999


Q ss_pred             EECCCCCCcccccccc-hhHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCC
Q 018075          147 YKLPDNVSLEEGAMCE-PLSVGVHACR-RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA  224 (361)
Q Consensus       147 ~~vP~~~~~~~aa~~~-~~~~a~~~l~-~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~  224 (361)
                      +++|+++++++++.+. .+.+||+++. ..++++|++|||+|+|++|++++|+|+.+|+..|+++++++++.++++++|+
T Consensus       165 ~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga  244 (381)
T PLN02740        165 VKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGI  244 (381)
T ss_pred             EECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCC
Confidence            9999999999888664 6788998764 5889999999999999999999999999999668999999999999999999


Q ss_pred             CEEeecCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCC-CEEEEEccCCCCcceechHh-hhcCcEE
Q 018075          225 DETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTPA-AAREVDV  302 (361)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~-~~~~~~i  302 (361)
                      +.++++.....++.+.+.++.   ++++|++||++|++..+..++++++++ |+++.+|.......++.... ++++.++
T Consensus       245 ~~~i~~~~~~~~~~~~v~~~~---~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~~~~i  321 (381)
T PLN02740        245 TDFINPKDSDKPVHERIREMT---GGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRSI  321 (381)
T ss_pred             cEEEecccccchHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhcCCeE
Confidence            988775432234555555543   338999999999877899999999996 99999997654322333222 3467889


Q ss_pred             EEeecC----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          303 IGIFRY----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       303 ~~~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      .|+...    ...+.++++++.+|++++.+.++++|+|  +++++|++.+.+++. .|++|++
T Consensus       322 ~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l--~e~~~A~~~~~~~~~-~k~~~~~  381 (381)
T PLN02740        322 TGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPF--EKINEAFQLLEDGKA-LRCLLHL  381 (381)
T ss_pred             EEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecH--HHHHHHHHHHHCCCc-eeEEEeC
Confidence            887653    2468899999999999877889999999  999999999988865 6999874

>PLN02827 Alcohol dehydrogenase-like

Probab=100.00  E-value=6.2e-49  Score=366.38  Aligned_cols=336  Identities=24%  Similarity=0.411  Sum_probs=280.1

Q ss_pred             cceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCC
Q 018075           14 QNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL   92 (361)
Q Consensus        14 ~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   92 (361)
                      .|+++++.++ +.++++++|.|+|+++||+|||.++|+|++|++...+.      ..+|+++|||++|+|+++|+++++|
T Consensus        12 ~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~------~~~p~i~GhE~~G~V~~vG~~v~~~   85 (378)
T PLN02827         12 TCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQ------ALFPRIFGHEASGIVESIGEGVTEF   85 (378)
T ss_pred             eeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCC------CCCCeeecccceEEEEEcCCCCccc
Confidence            4566666766 46999999999999999999999999999999887652      1468899999999999999999999


Q ss_pred             CCCCEEEecCCcCCCCCccccCCCCCCCCCccccCC--------------------CCCCCceeEEEEecCCceEECCCC
Q 018075           93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS--------------------PPTNGSLAHKVVHPAKLCYKLPDN  152 (361)
Q Consensus        93 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~g~~~~~~~~~~~~~~~vP~~  152 (361)
                      ++||+|++.+..+|+.|.+|+.|.+.+|+++.....                    ....|+|+||+.++++.++++|++
T Consensus        86 ~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~  165 (378)
T PLN02827         86 EKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPL  165 (378)
T ss_pred             CCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEECCCC
Confidence            999999998888999999999999999998643210                    002489999999999999999999


Q ss_pred             CCcccccccc-hhHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeec
Q 018075          153 VSLEEGAMCE-PLSVGVHACR-RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKV  230 (361)
Q Consensus       153 ~~~~~aa~~~-~~~~a~~~l~-~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~  230 (361)
                      +++++|+.+. .+.++|+++. ..++++|++|||+|+|++|++++|+|+.+|+..|++++.++++.++++++|++.++++
T Consensus       166 l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~i~~  245 (378)
T PLN02827        166 APLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINP  245 (378)
T ss_pred             CCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEcc
Confidence            9998888664 5677787664 4789999999999999999999999999999778888889999999999999888775


Q ss_pred             CCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCC-CEEEEEccCCCCcceec-hHhhhcCcEEEEeecC
Q 018075          231 STDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVAL-TPAAAREVDVIGIFRY  308 (361)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~-~~~~~~~~~i~~~~~~  308 (361)
                      .....++.+.++++.   +.++|++||++|.+..+...++.++++ |+++.+|.......+.. ..++.+++++.|+...
T Consensus       246 ~~~~~~~~~~v~~~~---~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~  322 (378)
T PLN02827        246 NDLSEPIQQVIKRMT---GGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGSLFG  322 (378)
T ss_pred             cccchHHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEeeecC
Confidence            432234555555443   348999999999877899999999998 99999997654333333 3577899999988654


Q ss_pred             ----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          309 ----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       309 ----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                          ..+++++++++++|++++.+.+++.|+|  +++++|++.+.+++. .|+||.+
T Consensus       323 ~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l--e~~~~A~~~~~~~~~-~k~vi~~  376 (378)
T PLN02827        323 GWKPKSDLPSLVDKYMNKEIMIDEFITHNLSF--DEINKAFELMREGKC-LRCVIHM  376 (378)
T ss_pred             CCchhhhHHHHHHHHHcCCCChHHheEEEecH--HHHHHHHHHHHCCCc-eEEEEEe
Confidence                3578899999999999776689999999  999999999998866 6998864

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=100.00  E-value=6.9e-49  Score=364.42  Aligned_cols=336  Identities=26%  Similarity=0.434  Sum_probs=282.0

Q ss_pred             cceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCC
Q 018075           14 QNMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL   92 (361)
Q Consensus        14 ~~~~~~~~~~~-~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   92 (361)
                      +|+++++.+++ +++++++|.|+|+++||+|||.++|+|++|++...|...    ..+|+++|||++|+|+++|+++++|
T Consensus         1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~----~~~p~i~G~e~~G~V~~vG~~v~~~   76 (358)
T TIGR03451         1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN----DEFPFLLGHEAAGVVEAVGEGVTDV   76 (358)
T ss_pred             CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc----ccCCcccccceEEEEEEeCCCCccc
Confidence            46777777764 599999999999999999999999999999998876431    2568999999999999999999999


Q ss_pred             CCCCEEEecCCcCCCCCccccCCCCCCCCCcccc--------CC----CCCCCceeEEEEecCCceEECCCCCCcccccc
Q 018075           93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF--------GS----PPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAM  160 (361)
Q Consensus        93 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~----~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~  160 (361)
                      ++||+|++.+...|+.|..|..|++.+|++....        +.    ....|+|+||+.++++.++++|+++++++|++
T Consensus        77 ~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~  156 (358)
T TIGR03451        77 APGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGL  156 (358)
T ss_pred             CCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHhhh
Confidence            9999999999999999999999999999863211        00    01359999999999999999999999998886


Q ss_pred             cc-hhHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchh
Q 018075          161 CE-PLSVGVHACR-RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVD  238 (361)
Q Consensus       161 ~~-~~~~a~~~l~-~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~  238 (361)
                      +. .+.+||+++. ..++++|++|||+|+|++|++++|+|+.+|+++|+++++++++.++++++|++.++++..  .++.
T Consensus       157 l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~--~~~~  234 (358)
T TIGR03451       157 LGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSG--TDPV  234 (358)
T ss_pred             hcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCC--cCHH
Confidence            64 5677887764 478999999999999999999999999999977899999999999999999988877533  4555


Q ss_pred             HHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC--cceechHhhhcCcEEEEeecC----CCcH
Q 018075          239 TDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE--MTVALTPAAAREVDVIGIFRY----RSTW  312 (361)
Q Consensus       239 ~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~~~~----~~~~  312 (361)
                      +.+.++.  .+.++|++||++|++..++.+++.++++|+++.+|.....  .+++...++.++.++.+++..    .+++
T Consensus       235 ~~i~~~~--~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  312 (358)
T TIGR03451       235 EAIRALT--GGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLPERDF  312 (358)
T ss_pred             HHHHHHh--CCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCCcHHHH
Confidence            5554443  3568999999999877899999999999999999976432  234444677788999887542    4678


Q ss_pred             HHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075          313 PLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  360 (361)
Q Consensus       313 ~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~  360 (361)
                      +++++++++|++++.+.++++|+|  +++++|++.+++++.. |+++.
T Consensus       313 ~~~~~l~~~g~l~~~~~i~~~~~l--~~~~~A~~~~~~~~~~-k~~~~  357 (358)
T TIGR03451       313 PMLVDLYLQGRLPLDAFVTERIGL--DDVEEAFDKMHAGDVL-RSVVE  357 (358)
T ss_pred             HHHHHHHHcCCCCchheEEEEecH--HHHHHHHHHHhCCCcc-eeEEe
Confidence            899999999999877788999999  9999999999988665 77765

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=100.00  E-value=6e-49  Score=360.99  Aligned_cols=336  Identities=36%  Similarity=0.632  Sum_probs=278.3

Q ss_pred             ceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCc-ccCcceeEEEEEeCCCCCCC
Q 018075           15 NMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPM-VIGHECAGIIEEVGSEVKSL   92 (361)
Q Consensus        15 ~~~~~~~~~~-~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~-~~G~e~~G~V~~vG~~v~~~   92 (361)
                      |++++++.+. ..++++.+.|.+.+++|+|||.++|||.+|++.+.+....   ...|. ++|||++|+|+++| .++.+
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~---~~~~~~i~GHE~~G~V~evG-~~~~~   76 (350)
T COG1063           1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPF---VPPGDIILGHEFVGEVVEVG-VVRGF   76 (350)
T ss_pred             CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCC---CCCCCcccCccceEEEEEec-cccCC
Confidence            5677788665 4448888778789999999999999999999998875322   23344 99999999999999 77889


Q ss_pred             CCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCC----CCCceeEEEEecCCceEEC-CCCCCcccccccchhHHH
Q 018075           93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPP----TNGSLAHKVVHPAKLCYKL-PDNVSLEEGAMCEPLSVG  167 (361)
Q Consensus        93 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~v-P~~~~~~~aa~~~~~~~a  167 (361)
                      ++||||++.|..+||+|.+|+.|.++.|++..+++...    .+|+|+||++++.++++++ |+++++++|++.++++++
T Consensus        77 ~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~~~~~aal~epla~~  156 (350)
T COG1063          77 KVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGIDEEAAALTEPLATA  156 (350)
T ss_pred             CCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCCChhhhhhcChhhhh
Confidence            99999999999999999999999999999776555322    5799999999997655555 777777888888999999


Q ss_pred             HHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH-cCCCEEeecCCCccchhHHHHHHH
Q 018075          168 VHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       168 ~~~l-~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~  245 (361)
                      +++. .....+++++|+|+|+|++|++++++++..|+..|++++.+++|++++++ .+++.+.+...  .+....+.++ 
T Consensus       157 ~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~--~~~~~~~~~~-  233 (350)
T COG1063         157 YHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSE--DDAGAEILEL-  233 (350)
T ss_pred             hhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCcc--ccHHHHHHHH-
Confidence            8874 44556666699999999999999999999999999999999999999999 55655544221  1333333333 


Q ss_pred             hhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCc-ceechHhhhcCcEEEEeec-C-CCcHHHHHHHHHcC
Q 018075          246 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM-TVALTPAAAREVDVIGIFR-Y-RSTWPLCIEFLRSG  322 (361)
Q Consensus       246 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~~-~-~~~~~~~~~~l~~g  322 (361)
                       +.+.++|++|||+|.+..+..+++.++++|+++.+|...... .++...++.+++++.|+.. . ...++.+++++++|
T Consensus       234 -t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~~~~~~~~~~~~ll~~g  312 (350)
T COG1063         234 -TGGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSGREDFERALDLLASG  312 (350)
T ss_pred             -hCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccCCCCcccHHHHHHHHHcC
Confidence             346689999999999988999999999999999999887654 4667788999999999965 3 57899999999999


Q ss_pred             CCCCCCceEEEecCChhhHHHHHHHHhcCCC-ceEEEEe
Q 018075          323 KIDVKPLITHRFGFTQKEIEDAFEISAQGGN-AIKVMFN  360 (361)
Q Consensus       323 ~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~-~gkvvi~  360 (361)
                      ++++.+.+++.+++  +++++|++.+.+.+. ..|++++
T Consensus       313 ~i~~~~lit~~~~~--~~~~~a~~~~~~~~~~~~Kv~i~  349 (350)
T COG1063         313 KIDPEKLITHRLPL--DDAAEAYELFADRKEEAIKVVLK  349 (350)
T ss_pred             CCChhHceEeeccH--HHHHHHHHHHHhcCCCeEEEEec
Confidence            99999999999888  999999999998644 5688875

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=100.00  E-value=2.1e-48  Score=362.05  Aligned_cols=337  Identities=28%  Similarity=0.435  Sum_probs=276.3

Q ss_pred             ceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCC
Q 018075           15 NMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE   93 (361)
Q Consensus        15 ~~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   93 (361)
                      ++++++..+ +.++++++|.|+|.++||+|||.++|+|++|++...|....   ...|.++|||++|+|+++|+++++|+
T Consensus         2 ~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~---~~~p~i~GhE~~G~V~~vG~~v~~~~   78 (368)
T TIGR02818         2 SRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPE---GVFPVILGHEGAGIVEAVGEGVTSVK   78 (368)
T ss_pred             ceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCC---CCCCeeeccccEEEEEEECCCCccCC
Confidence            456666654 57999999999999999999999999999999988765321   35689999999999999999999999


Q ss_pred             CCCEEEecCCcCCCCCccccCCCCCCCCCcccc---CC-----------------CCCCCceeEEEEecCCceEECCCCC
Q 018075           94 VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF---GS-----------------PPTNGSLAHKVVHPAKLCYKLPDNV  153 (361)
Q Consensus        94 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----------------~~~~g~~~~~~~~~~~~~~~vP~~~  153 (361)
                      +||||++.+..+|+.|.+|+.|++++|+++...   +.                 ....|+|+||++++++.++++|+++
T Consensus        79 ~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l  158 (368)
T TIGR02818        79 VGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAA  158 (368)
T ss_pred             CCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCCC
Confidence            999999988889999999999999999975321   10                 0024799999999999999999999


Q ss_pred             Ccccccccc-hhHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecC
Q 018075          154 SLEEGAMCE-PLSVGVHACR-RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS  231 (361)
Q Consensus       154 ~~~~aa~~~-~~~~a~~~l~-~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  231 (361)
                      ++++|+.+. ++.+||+++. .+++++|++|||+|+|++|++++|+||.+|+.+|++++.++++.++++++|++.++++.
T Consensus       159 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~  238 (368)
T TIGR02818       159 PLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPN  238 (368)
T ss_pred             CHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEccc
Confidence            999998664 7888999874 58899999999999999999999999999997789999999999999999999888754


Q ss_pred             CCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCC-CEEEEEccCCCC--cceechHhhhcCcEEEEeecC
Q 018075          232 TDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTE--MTVALTPAAAREVDVIGIFRY  308 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~~~~  308 (361)
                      +...++.+.+.++.   +.++|++||++|++..+..++++++++ |+++.+|.....  ..+....+. ....+.++...
T Consensus       239 ~~~~~~~~~v~~~~---~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~  314 (368)
T TIGR02818       239 DYDKPIQEVIVEIT---DGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLV-TGRVWRGSAFG  314 (368)
T ss_pred             ccchhHHHHHHHHh---CCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHh-ccceEEEeecc
Confidence            32334445555443   348999999999877899999999886 999999975422  222222222 23456665432


Q ss_pred             ----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          309 ----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       309 ----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                          ..++.++++++++|++++++.++++|+|  +++++|++.+++++. .|++++|
T Consensus       315 ~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l--~~~~~A~~~~~~~~~-~k~~v~~  368 (368)
T TIGR02818       315 GVKGRTELPGIVEQYMKGEIALDDFVTHTMPL--EDINEAFDLMHEGKS-IRTVIHY  368 (368)
T ss_pred             CCCcHHHHHHHHHHHHCCCCCchhheeEEecH--HHHHHHHHHHhCCCc-eeEEeeC
Confidence                4578899999999999888889999999  999999999988754 7999875

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=5.8e-49  Score=334.46  Aligned_cols=339  Identities=27%  Similarity=0.429  Sum_probs=291.4

Q ss_pred             cceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCC
Q 018075           14 QNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL   92 (361)
Q Consensus        14 ~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   92 (361)
                      +.++|+.-++ ++|.++|+.+++|+.+||+||+.++++|++|...++|...   ...+|.|+|||.+|+|+.+|++|+.+
T Consensus         7 ~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~---~~~fP~IlGHEaaGIVESvGegV~~v   83 (375)
T KOG0022|consen    7 TCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDP---EGLFPVILGHEAAGIVESVGEGVTTV   83 (375)
T ss_pred             EEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCc---cccCceEecccceeEEEEecCCcccc
Confidence            4578888877 7899999999999999999999999999999999988642   24789999999999999999999999


Q ss_pred             CCCCEEEecCCcCCCCCccccCCCCCCCCCccccCC---------------------CCCCCceeEEEEecCCceEECCC
Q 018075           93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS---------------------PPTNGSLAHKVVHPAKLCYKLPD  151 (361)
Q Consensus        93 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~g~~~~~~~~~~~~~~~vP~  151 (361)
                      ++||+|+......|++|.+|.++..++|..+.....                     .....+|+||.+++...+.++++
T Consensus        84 k~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId~  163 (375)
T KOG0022|consen   84 KPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKIDP  163 (375)
T ss_pred             CCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecCC
Confidence            999999999999999999999999999987544431                     01234899999999999999999


Q ss_pred             CCCcccccccc-hhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEee
Q 018075          152 NVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAK  229 (361)
Q Consensus       152 ~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~  229 (361)
                      ..+++.++++. ..+|+|.+. +.++++||+++.|+|-|++|+++++-||+.||.++|++|-+++|.+.+++||+++.++
T Consensus       164 ~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~iN  243 (375)
T KOG0022|consen  164 SAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFIN  243 (375)
T ss_pred             CCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceecC
Confidence            99999999885 678888775 6699999999999999999999999999999999999999999999999999999887


Q ss_pred             cCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCC-CEEEEEccCCCCcceechHh-hhcCcEEEEee-
Q 018075          230 VSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTPA-AAREVDVIGIF-  306 (361)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~~-  306 (361)
                      .........+.+.++   .+.|+|+.|||.|....+++++.+...| |+-+.+|.......+...++ .+.+.++.|+. 
T Consensus       244 p~d~~~~i~evi~Em---TdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~Gs~F  320 (375)
T KOG0022|consen  244 PKDLKKPIQEVIIEM---TDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWKGSAF  320 (375)
T ss_pred             hhhccccHHHHHHHH---hcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEEEEec
Confidence            542222355555555   4689999999999999999999999999 99999997776556655553 33455555443 


Q ss_pred             ---cCCCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          307 ---RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       307 ---~~~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                         ..+.++..+.+.+.++++.++..++++++|  +++++|++.|.+|+.. |.|+.+
T Consensus       321 GG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f--~~In~AF~ll~~Gksi-R~vl~~  375 (375)
T KOG0022|consen  321 GGFKSKSDIPKLVKDYMKKKLNLDEFITHELPF--EEINKAFDLLHEGKSI-RCVLWM  375 (375)
T ss_pred             ccccchhhhhHHHHHHHhCccchhhhhhcccCH--HHHHHHHHHHhCCceE-EEEEeC
Confidence               237899999999999999999999999999  9999999999999775 777653

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=8.8e-49  Score=355.22  Aligned_cols=308  Identities=30%  Similarity=0.433  Sum_probs=256.7

Q ss_pred             eEEEEe---eCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCC
Q 018075           16 MAAWLL---GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL   92 (361)
Q Consensus        16 ~~~~~~---~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   92 (361)
                      ++.++.   +++.++++|+|.|+|+++||||||+++|+|+.|.+..+|..  ....+.|+++|.|++|+|+++|++|++|
T Consensus         2 ka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~--~~~~~~P~i~G~d~aG~V~avG~~V~~~   79 (326)
T COG0604           2 KAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLA--PPVRPLPFIPGSEAAGVVVAVGSGVTGF   79 (326)
T ss_pred             eEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCC--CCCCCCCCcccceeEEEEEEeCCCCCCc
Confidence            455555   34569999999999999999999999999999999998751  2224689999999999999999999999


Q ss_pred             CCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccc-hhHHHHHHH
Q 018075           93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC  171 (361)
Q Consensus        93 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-~~~~a~~~l  171 (361)
                      ++||||+..+ .                        ....|+|+||+.++++.++++|+++++++||+++ .+.|||+++
T Consensus        80 ~~GdrV~~~~-~------------------------~~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l  134 (326)
T COG0604          80 KVGDRVAALG-G------------------------VGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLAL  134 (326)
T ss_pred             CCCCEEEEcc-C------------------------CCCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999742 0                        0037999999999999999999999999999775 789999999


Q ss_pred             Hh-cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcC
Q 018075          172 RR-ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       172 ~~-~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      .. .++++|++|||+| +|++|.+++||||.+|+ .++++.+++++.++++++|++++++|..  +++.+.++++.  .+
T Consensus       135 ~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~y~~--~~~~~~v~~~t--~g  209 (326)
T COG0604         135 FDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVINYRE--EDFVEQVRELT--GG  209 (326)
T ss_pred             HHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEcCCc--ccHHHHHHHHc--CC
Confidence            76 8899999999998 79999999999999998 4566667777777999999999998755  46888887775  35


Q ss_pred             CCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC--CcceechHhhhcCcEEEEeecC-C------CcHHHHHHHHH
Q 018075          250 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT--EMTVALTPAAAREVDVIGIFRY-R------STWPLCIEFLR  320 (361)
Q Consensus       250 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~-~------~~~~~~~~~l~  320 (361)
                      .++|+|||++|++ .+..++++|+++|+++.+|..++  ...++...+..+.+...+.... .      +.+++++++++
T Consensus       210 ~gvDvv~D~vG~~-~~~~~l~~l~~~G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~  288 (326)
T COG0604         210 KGVDVVLDTVGGD-TFAASLAALAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLA  288 (326)
T ss_pred             CCceEEEECCCHH-HHHHHHHHhccCCEEEEEecCCCCCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHHH
Confidence            6899999999977 89999999999999999997663  3334455677788888887765 2      46778999999


Q ss_pred             cCCCCCCCceEEEecCChhhHHHHHH--HHhcCCCceEEEEeC
Q 018075          321 SGKIDVKPLITHRFGFTQKEIEDAFE--ISAQGGNAIKVMFNL  361 (361)
Q Consensus       321 ~g~~~~~~~~~~~~~l~~~~~~~a~~--~l~~~~~~gkvvi~~  361 (361)
                      +|.+  ++.+.++|+|  ++...+..  .++ ++..||+|+++
T Consensus       289 ~g~l--~~~i~~~~~l--~e~~~a~a~~~~~-~~~~GKvvl~~  326 (326)
T COG0604         289 SGKL--KPVIDRVYPL--AEAPAAAAHLLLE-RRTTGKVVLKV  326 (326)
T ss_pred             cCCC--cceeccEech--hhhHHHHHHHHcc-cCCcceEEEeC
Confidence            9999  7778889999  88544444  444 58899999974

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=100.00  E-value=2.7e-48  Score=362.66  Aligned_cols=336  Identities=24%  Similarity=0.432  Sum_probs=268.1

Q ss_pred             ceEEEEeeCCceEEEEecCCCCC-------CCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCC
Q 018075           15 NMAAWLLGIKTLKIQPYHLPTLG-------PQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGS   87 (361)
Q Consensus        15 ~~~~~~~~~~~l~~~~~~~p~~~-------~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   87 (361)
                      |+++++.+++.++++++|.|+|+       +|||||||.++|||++|++.+.|..    ....|.++|||++|+|+++|+
T Consensus         3 mka~v~~~~~~~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~----~~~~p~i~GhE~~G~V~~vG~   78 (393)
T TIGR02819         3 NRGVVYLGPGKVEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRT----TAPTGLVLGHEITGEVIEKGR   78 (393)
T ss_pred             ceEEEEecCCceeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCC----CCCCCccccceeEEEEEEEcC
Confidence            56777778889999999999874       6899999999999999999887642    235689999999999999999


Q ss_pred             CCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCcc------ccCCC---CCCCceeEEEEecCC--ceEECCCCCCc-
Q 018075           88 EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMR------FFGSP---PTNGSLAHKVVHPAK--LCYKLPDNVSL-  155 (361)
Q Consensus        88 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~---~~~g~~~~~~~~~~~--~~~~vP~~~~~-  155 (361)
                      +|++|++||||++.+...|+.|.+|+.|++++|++..      +++..   ...|+|+||+++++.  .++++|++++. 
T Consensus        79 ~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~~~~~~  158 (393)
T TIGR02819        79 DVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDRDQAL  158 (393)
T ss_pred             ccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECCCccccc
Confidence            9999999999999988999999999999999999753      12211   247999999999964  69999998753 


Q ss_pred             ---cccc-ccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecC
Q 018075          156 ---EEGA-MCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS  231 (361)
Q Consensus       156 ---~~aa-~~~~~~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  231 (361)
                         ..++ +..++.++|+++++.++++|++|||.|+|++|++++|+|+.+|++.+++++.+++|.++++++|++. +++.
T Consensus       159 ~~~~~~a~l~~~~~ta~~a~~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~Ga~~-v~~~  237 (393)
T TIGR02819       159 EKIRDLTMLSDIFPTGYHGAVTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGCET-VDLS  237 (393)
T ss_pred             ccccceeeeccHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHcCCeE-EecC
Confidence               2333 4467889999998888999999999999999999999999999977777778889999999999974 3322


Q ss_pred             CCccchhHHHHHHHhhcCCCccEEEEccCCh--------------HHHHHHHHhhcCCCEEEEEccCC-CCc-c------
Q 018075          232 TDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD--------------KTMSTALNATRPGGKVCLIGLAK-TEM-T------  289 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~--------------~~~~~~~~~l~~~G~~v~~g~~~-~~~-~------  289 (361)
                       ...++.+.+.++.  .+.++|++||++|.+              ..++.+++.++++|+++.+|... ... .      
T Consensus       238 -~~~~~~~~v~~~~--~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~  314 (393)
T TIGR02819       238 -KDATLPEQIEQIL--GEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDPGAVDAAAK  314 (393)
T ss_pred             -CcccHHHHHHHHc--CCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCccccccccccc
Confidence             2234545554443  356899999999975              37999999999999999999753 111 1      


Q ss_pred             -----eechHhhhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceE-EEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          290 -----VALTPAAAREVDVIGIFRYR-STWPLCIEFLRSGKIDVKPLIT-HRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       290 -----~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~l~~g~~~~~~~~~-~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                           +.....+.++.++.+..... +.+.++++++++|++++.+.++ +.|+|  +++++|++.+.+++ .+|+++++
T Consensus       315 ~~~~~i~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l--~~~~~a~~~~~~~~-~~Kvvi~~  390 (393)
T TIGR02819       315 TGSLSIRFGLGWAKSHSFHTGQTPVMKYNRNLMQAILHDRVQIAKAVNVTVISL--DDAPEGYAEFDAGA-AKKFVIDP  390 (393)
T ss_pred             ccccccchHHhhccCceEEeccCChhhhHHHHHHHHHcCCCCHHHceecceecH--HHHHHHHHHHhhCC-ceEEEEeC
Confidence                 11223345556666643332 2346899999999998777777 67999  99999999999874 48999863

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=7.6e-48  Score=356.21  Aligned_cols=335  Identities=28%  Similarity=0.498  Sum_probs=282.6

Q ss_pred             ceEEEEeeCCceEEEEecCCCC-CCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCC
Q 018075           15 NMAAWLLGIKTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE   93 (361)
Q Consensus        15 ~~~~~~~~~~~l~~~~~~~p~~-~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   93 (361)
                      |+++++.+++.++++++|.|+| .++||+|||.++|+|++|++...+..  .  ...|.++|||++|+|+++|+++++|+
T Consensus         1 Mka~~~~~~~~~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~--~--~~~p~i~G~e~~G~V~~vG~~v~~~~   76 (347)
T PRK10309          1 MKSVVNDTDGIVRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNG--A--HYYPITLGHEFSGYVEAVGSGVDDLH   76 (347)
T ss_pred             CceEEEeCCCceEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCC--C--CCCCcccccceEEEEEEeCCCCCCCC
Confidence            3566777778899999999998 59999999999999999987532210  0  13588999999999999999999999


Q ss_pred             CCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHHHHHHHHh
Q 018075           94 VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRR  173 (361)
Q Consensus        94 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~~  173 (361)
                      +||+|++.+..+|+.|.+|+.|.+..|+...+++. ...|+|+||+.++++.++++|+++++++|+.+.++++++++++.
T Consensus        77 vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~~~~~~~~~~~~  155 (347)
T PRK10309         77 PGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGS-RRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIEPITVGLHAFHL  155 (347)
T ss_pred             CCCEEEECCCcCCCCCcchhCcCcccCCCcceecc-CCCCccceeEEeehHHeEECcCCCCHHHhhhhhHHHHHHHHHHh
Confidence            99999999989999999999999999998766553 35799999999999999999999999999877677778888777


Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCcc
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      ..+++|++|||+|+|++|++++|+|+.+|++.|+++++++++.++++++|++.++++..  .+ .+.+.++.  .+.++|
T Consensus       156 ~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~--~~-~~~~~~~~--~~~~~d  230 (347)
T PRK10309        156 AQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSRE--MS-APQIQSVL--RELRFD  230 (347)
T ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcc--cC-HHHHHHHh--cCCCCC
Confidence            88899999999999999999999999999976888899999999999999988877543  22 22333332  346788


Q ss_pred             -EEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCccee---chHhhhcCcEEEEeecC------CCcHHHHHHHHHcCC
Q 018075          254 -VSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVA---LTPAAAREVDVIGIFRY------RSTWPLCIEFLRSGK  323 (361)
Q Consensus       254 -~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~---~~~~~~~~~~i~~~~~~------~~~~~~~~~~l~~g~  323 (361)
                       ++|||+|++..+..+++.|+++|+++.+|......+++   ...+..+++++.|++.+      .++++++++++++|.
T Consensus       231 ~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~g~  310 (347)
T PRK10309        231 QLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERK  310 (347)
T ss_pred             eEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHHHHHHcCC
Confidence             99999998778999999999999999999655432222   23567788999987653      357889999999999


Q ss_pred             CCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          324 IDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       324 ~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      +.+++.++++|+|  +++++|++.+.+++..||+|+++
T Consensus       311 i~~~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  346 (347)
T PRK10309        311 LSLEPLIAHRGSF--ESFAQAVRDLAGNPMPGKVLLQI  346 (347)
T ss_pred             CCchhheEEEeeH--HHHHHHHHHHhcCCcceEEEEeC
Confidence            9888899999999  99999999999998889999874

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=100.00  E-value=7.5e-48  Score=359.03  Aligned_cols=337  Identities=25%  Similarity=0.412  Sum_probs=279.5

Q ss_pred             cceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCC
Q 018075           14 QNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL   92 (361)
Q Consensus        14 ~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   92 (361)
                      +++++++.++ +.++++++|.|+|+++||+|||.++|+|++|++.+.|...   ...+|+++|||++|+|+++|+++++|
T Consensus         2 ~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~---~~~~p~i~G~e~~G~V~~vG~~v~~~   78 (369)
T cd08301           2 TCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQ---TPLFPRILGHEAAGIVESVGEGVTDL   78 (369)
T ss_pred             ccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCC---CCCCCcccccccceEEEEeCCCCCcc
Confidence            5677777754 6799999999999999999999999999999998876532   23568999999999999999999999


Q ss_pred             CCCCEEEecCCcCCCCCccccCCCCCCCCCcccc---CC------------------CCCCCceeEEEEecCCceEECCC
Q 018075           93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF---GS------------------PPTNGSLAHKVVHPAKLCYKLPD  151 (361)
Q Consensus        93 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------------------~~~~g~~~~~~~~~~~~~~~vP~  151 (361)
                      ++||||++.+..+|++|.+|+.|++..|++..+.   +.                  ....|+|+||+++++..++++|+
T Consensus        79 ~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~  158 (369)
T cd08301          79 KPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINP  158 (369)
T ss_pred             ccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCC
Confidence            9999999988899999999999999999986432   00                  00348899999999999999999


Q ss_pred             CCCcccccccc-hhHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEee
Q 018075          152 NVSLEEGAMCE-PLSVGVHACR-RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAK  229 (361)
Q Consensus       152 ~~~~~~aa~~~-~~~~a~~~l~-~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~  229 (361)
                      ++++++|+++. .+.+||+++. ..++++|++|||+|+|++|++++|+|+.+|+..|+++++++++.++++++|++.+++
T Consensus       159 ~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~  238 (369)
T cd08301         159 EAPLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVN  238 (369)
T ss_pred             CCCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEc
Confidence            99999988664 6778888764 488999999999999999999999999999966899999999999999999988876


Q ss_pred             cCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCC-CEEEEEccCCCCcceechH-hhhcCcEEEEeec
Q 018075          230 VSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTP-AAAREVDVIGIFR  307 (361)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~-~~~~~~~i~~~~~  307 (361)
                      +.....++.+.++++.   +.++|++||++|.+..+..++++++++ |+++.+|.......+.... ...+++++.|++.
T Consensus       239 ~~~~~~~~~~~v~~~~---~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~  315 (369)
T cd08301         239 PKDHDKPVQEVIAEMT---GGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLNGRTLKGTLF  315 (369)
T ss_pred             ccccchhHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHhcCCeEEEEec
Confidence            5432234545555443   348999999999877889999999996 9999999765322222222 2346889988765


Q ss_pred             C----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 018075          308 Y----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF  359 (361)
Q Consensus       308 ~----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi  359 (361)
                      .    +.+++++++++.+|.+++.+.++++|+|  +++++|++.+.+++.. |+++
T Consensus       316 ~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l--~~~~~A~~~~~~~~~~-k~~~  368 (369)
T cd08301         316 GGYKPKTDLPNLVEKYMKKELELEKFITHELPF--SEINKAFDLLLKGECL-RCIL  368 (369)
T ss_pred             CCCChHHHHHHHHHHHHcCCCCcHHheeeeecH--HHHHHHHHHHHCCCce-eEEe
Confidence            3    3478899999999999877788899999  9999999999999764 8776

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=100.00  E-value=1.1e-47  Score=357.60  Aligned_cols=337  Identities=28%  Similarity=0.448  Sum_probs=276.0

Q ss_pred             cceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCC
Q 018075           14 QNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL   92 (361)
Q Consensus        14 ~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   92 (361)
                      +++++++..+ ++++++++|.|+|+++||+|||.++|+|++|++...|....   ..+|+++|||++|+|+++|+++++|
T Consensus         2 ~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~---~~~p~v~G~E~~G~V~~vG~~v~~~   78 (368)
T cd08300           2 TCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPE---GLFPVILGHEGAGIVESVGEGVTSV   78 (368)
T ss_pred             cceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCcc---CCCCceeccceeEEEEEeCCCCccC
Confidence            4566666644 67999999999999999999999999999999988765321   3578999999999999999999999


Q ss_pred             CCCCEEEecCCcCCCCCccccCCCCCCCCCcccc---CC-----------------CCCCCceeEEEEecCCceEECCCC
Q 018075           93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF---GS-----------------PPTNGSLAHKVVHPAKLCYKLPDN  152 (361)
Q Consensus        93 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----------------~~~~g~~~~~~~~~~~~~~~vP~~  152 (361)
                      ++||+|++.+..+|++|.+|+.|+++.|+++...   +.                 ....|+|+||+.++++.++++|++
T Consensus        79 ~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~  158 (368)
T cd08300          79 KPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPE  158 (368)
T ss_pred             CCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCCC
Confidence            9999999988889999999999999999875321   00                 012479999999999999999999


Q ss_pred             CCcccccccc-hhHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeec
Q 018075          153 VSLEEGAMCE-PLSVGVHACR-RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKV  230 (361)
Q Consensus       153 ~~~~~aa~~~-~~~~a~~~l~-~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~  230 (361)
                      +++++|+.+. ++.+||+++. ..++++|++|||+|+|++|++++|+|+.+|+..|++++.++++.++++++|++.++++
T Consensus       159 l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~  238 (368)
T cd08300         159 APLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNP  238 (368)
T ss_pred             CChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcc
Confidence            9999988665 7788998874 4889999999999999999999999999999778999999999999999999988876


Q ss_pred             CCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCC-CEEEEEccCCCCccee--chHhhhcCcEEEEeec
Q 018075          231 STDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVA--LTPAAAREVDVIGIFR  307 (361)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~--~~~~~~~~~~i~~~~~  307 (361)
                      .+.++++.+.+.++.   ++++|+|||++|++..++.++++++++ |+++.+|.......+.  ...+. ....+.++..
T Consensus       239 ~~~~~~~~~~v~~~~---~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~  314 (368)
T cd08300         239 KDHDKPIQQVLVEMT---DGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLV-TGRVWKGTAF  314 (368)
T ss_pred             cccchHHHHHHHHHh---CCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHh-hcCeEEEEEe
Confidence            442224555555543   348999999999877899999999886 9999999653211222  22222 3345555443


Q ss_pred             C----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075          308 Y----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  360 (361)
Q Consensus       308 ~----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~  360 (361)
                      .    .+++.++++++++|++++.+.++++|+|  +++++|++.+.+++. .|++++
T Consensus       315 ~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~l--e~~~~A~~~~~~~~~-~k~~~~  368 (368)
T cd08300         315 GGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPL--DEINEAFDLMHAGKS-IRTVVK  368 (368)
T ss_pred             cccCcHHHHHHHHHHHHcCCCChhhceeeeEcH--HHHHHHHHHHhCCCC-ceeeeC
Confidence            2    5678899999999999877889999999  999999999988854 688875

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=100.00  E-value=1.3e-47  Score=355.41  Aligned_cols=333  Identities=23%  Similarity=0.329  Sum_probs=270.4

Q ss_pred             CcccceEEEEee-CCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCC
Q 018075           11 DKNQNMAAWLLG-IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEV   89 (361)
Q Consensus        11 ~~~~~~~~~~~~-~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   89 (361)
                      -|+...+++..+ ++.+++.+++.|.|+++||+|||.++|+|++|++.+.|...   ....|.++|||++|+|+++|++|
T Consensus         9 ~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~---~~~~p~i~GhE~~G~V~~vG~~v   85 (360)
T PLN02586          9 HPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWG---FTRYPIVPGHEIVGIVTKLGKNV   85 (360)
T ss_pred             chhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcC---CCCCCccCCcceeEEEEEECCCC
Confidence            344555555554 46799999999999999999999999999999998876431   13568999999999999999999


Q ss_pred             CCCCCCCEEEecCC-cCCCCCccccCCCCCCCCCccccC------CCCCCCceeEEEEecCCceEECCCCCCcccccccc
Q 018075           90 KSLEVGDRVALEPG-ISCGHCSLCKAGSYNLCPEMRFFG------SPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE  162 (361)
Q Consensus        90 ~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~  162 (361)
                      ++|++||+|++.+. .+|+.|.+|+.|.+++|++..+..      +....|+|+||++++++.++++|+++++++|+.+.
T Consensus        86 ~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~  165 (360)
T PLN02586         86 KKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLL  165 (360)
T ss_pred             CccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhhhh
Confidence            99999999986544 479999999999999999865431      12236999999999999999999999999988664


Q ss_pred             -hhHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChh-HHHHHHHcCCCEEeecCCCccchhH
Q 018075          163 -PLSVGVHACRR-ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ-RLSIARNLGADETAKVSTDIEDVDT  239 (361)
Q Consensus       163 -~~~~a~~~l~~-~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~-~~~~~~~lg~~~~~~~~~~~~~~~~  239 (361)
                       .+.++|++++. ..+++|++|||.|+|++|++++|+||.+|++ +++++.+++ +.++++++|++.++++..  .   +
T Consensus       166 ~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~-vi~~~~~~~~~~~~~~~~Ga~~vi~~~~--~---~  239 (360)
T PLN02586        166 CAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLK-VTVISSSSNKEDEAINRLGADSFLVSTD--P---E  239 (360)
T ss_pred             cchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEeCCcchhhhHHHhCCCcEEEcCCC--H---H
Confidence             56778888865 5578999999999999999999999999995 566655554 456778999988876432  1   2


Q ss_pred             HHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-CCcHHHHHHH
Q 018075          240 DVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEF  318 (361)
Q Consensus       240 ~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~  318 (361)
                      .+++.   .+ ++|++||++|.+..++.++++++++|+++.+|.......++...++.++..+.++..+ ..++++++++
T Consensus       240 ~~~~~---~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l  315 (360)
T PLN02586        240 KMKAA---IG-TMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFPLVLGRKLVGGSDIGGIKETQEMLDF  315 (360)
T ss_pred             HHHhh---cC-CCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCCCccCHHHHHhCCeEEEEcCcCCHHHHHHHHHH
Confidence            23332   22 6999999999876899999999999999999976544455666677788888887654 4578999999


Q ss_pred             HHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          319 LRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       319 l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      +++|+++  +.+ ++|+|  +++++|++.+.+++..||+|+++
T Consensus       316 i~~g~i~--~~~-~~~~l--~~~~~A~~~~~~~~~~gkvvi~~  353 (360)
T PLN02586        316 CAKHNIT--ADI-ELIRM--DEINTAMERLAKSDVRYRFVIDV  353 (360)
T ss_pred             HHhCCCC--CcE-EEEeH--HHHHHHHHHHHcCCCcEEEEEEc
Confidence            9999994  444 57888  99999999999998889999864

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=100.00  E-value=4e-47  Score=352.04  Aligned_cols=340  Identities=38%  Similarity=0.663  Sum_probs=289.1

Q ss_pred             ceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhccccc-cc-------ccCCCCcccCcceeEEEEEeC
Q 018075           15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRC-AN-------FIVKKPMVIGHECAGIIEEVG   86 (361)
Q Consensus        15 ~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~-~~-------~~~~~p~~~G~e~~G~V~~vG   86 (361)
                      |++.++.+++.++++++|.|+|.++||+||+.++++|++|++...+... ..       .....|+++|+|++|+|+++|
T Consensus         1 mka~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG   80 (351)
T cd08233           1 MKAARYHGRKDIRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEVG   80 (351)
T ss_pred             CceEEEecCCceEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEeC
Confidence            3566666788999999999999999999999999999999876543210 00       002368899999999999999


Q ss_pred             CCCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHH
Q 018075           87 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSV  166 (361)
Q Consensus        87 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~  166 (361)
                      ++++++++||+|++.+...|+.|.+|+.|++.+|+++.+.+....+|+|++|+.++.+.++++|+++++++|+.+.++.+
T Consensus        81 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~~~~~t  160 (351)
T cd08233          81 SGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALVEPLAV  160 (351)
T ss_pred             CCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhccHHHH
Confidence            99999999999999888899999999999999999877654322379999999999999999999999999887778889


Q ss_pred             HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHh
Q 018075          167 GVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN  246 (361)
Q Consensus       167 a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~  246 (361)
                      ||+++...++++|++|||+|+|++|++++|+|+.+|++.|+++++++++.++++++|++.++++..  .++.+.+.+.. 
T Consensus       161 a~~~l~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~--~~~~~~l~~~~-  237 (351)
T cd08233         161 AWHAVRRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTE--VDVVAEVRKLT-  237 (351)
T ss_pred             HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCc--cCHHHHHHHHh-
Confidence            999997788999999999999999999999999999977888889999999999999998877543  45655555443 


Q ss_pred             hcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCC
Q 018075          247 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKID  325 (361)
Q Consensus       247 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~  325 (361)
                       .++++|++||++|....++.++++|+++|+++.+|......+++...+..+++++.+...+ .++++++++++++|+++
T Consensus       238 -~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~l~  316 (351)
T cd08233         238 -GGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEKTLTGSICYTREDFEEVIDLLASGKID  316 (351)
T ss_pred             -CCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCCCCccCHHHHHhhCcEEEEEeccCcchHHHHHHHHHcCCCC
Confidence             3457999999999776899999999999999999976554455666778899999998766 68899999999999997


Q ss_pred             CCCceEEEecCChhhH-HHHHHHHhcCCCc-eEEEEe
Q 018075          326 VKPLITHRFGFTQKEI-EDAFEISAQGGNA-IKVMFN  360 (361)
Q Consensus       326 ~~~~~~~~~~l~~~~~-~~a~~~l~~~~~~-gkvvi~  360 (361)
                      +.+.++++|++  +++ ++|++.+.+++.. +|+||.
T Consensus       317 ~~~~i~~~~~l--~e~~~~a~~~~~~~~~~~~k~v~~  351 (351)
T cd08233         317 AEPLITSRIPL--EDIVEKGFEELINDKEQHVKILVS  351 (351)
T ss_pred             hHHheEEEecH--HHHHHHHHHHHHhCCCCceEEEeC
Confidence            77778889999  996 7999999999874 999873

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=2.6e-47  Score=354.37  Aligned_cols=321  Identities=22%  Similarity=0.343  Sum_probs=266.1

Q ss_pred             CCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecC
Q 018075           23 IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEP  102 (361)
Q Consensus        23 ~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~  102 (361)
                      ++.+.+.+++.|.|+++||+|||.++|+|++|++...|...   ....|.++|||++|+|+++|+++++|++||||++.+
T Consensus        16 ~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~---~~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV~~~~   92 (375)
T PLN02178         16 SGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWG---FSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGV   92 (375)
T ss_pred             CCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCC---CCCCCcccCceeeEEEEEECCCCCccCCCCEEEEcC
Confidence            46799999999999999999999999999999998876431   124689999999999999999999999999998765


Q ss_pred             Cc-CCCCCccccCCCCCCCCCccccC------CCCCCCceeEEEEecCCceEECCCCCCcccccccc-hhHHHHHHHHhc
Q 018075          103 GI-SCGHCSLCKAGSYNLCPEMRFFG------SPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRRA  174 (361)
Q Consensus       103 ~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-~~~~a~~~l~~~  174 (361)
                      .. .|+.|.+|+.|++++|++..+..      +....|+|+||+.++++.++++|+++++++|+++. .+.++|+++...
T Consensus        93 ~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~  172 (375)
T PLN02178         93 IIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYY  172 (375)
T ss_pred             ccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccchHHHHHHHHh
Confidence            54 69999999999999999865421      11236999999999999999999999999988664 567788888654


Q ss_pred             C--CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh-hHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCC
Q 018075          175 N--VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV-QRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       175 ~--~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~-~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (361)
                      .  .++|++|+|.|+|++|++++|+||.+|+ .+++++.++ ++.++++++|++.++++..  .   +.+.+.   .+ +
T Consensus       173 ~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~--~---~~v~~~---~~-~  242 (375)
T PLN02178        173 GMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDRLGADSFLVTTD--S---QKMKEA---VG-T  242 (375)
T ss_pred             CCCCCCCCEEEEEcccHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHhCCCcEEEcCcC--H---HHHHHh---hC-C
Confidence            3  4689999999999999999999999999 467776654 4578889999998876432  1   233332   23 6


Q ss_pred             ccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCCCce
Q 018075          252 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLI  330 (361)
Q Consensus       252 ~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~  330 (361)
                      +|++||++|.+..++.++++++++|+++.+|.......++...+.+++.++.|+... .+++.++++++++|+++  +.+
T Consensus       243 ~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~--~~i  320 (375)
T PLN02178        243 MDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEMLEFCAKHKIV--SDI  320 (375)
T ss_pred             CcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCCCCccCHHHHHhCCeEEEEeCccCHHHHHHHHHHHHhCCCc--ccE
Confidence            999999999876789999999999999999976544456666778899999998765 46789999999999994  445


Q ss_pred             EEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          331 THRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       331 ~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                       +.|+|  +++++|++.+.+++..||+|+++
T Consensus       321 -~~~~l--~~~~~A~~~~~~~~~~gkvvi~~  348 (375)
T PLN02178        321 -ELIKM--SDINSAMDRLAKSDVRYRFVIDV  348 (375)
T ss_pred             -EEEeH--HHHHHHHHHHHcCCCceEEEEEe
Confidence             56888  99999999999998889999864

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=100.00  E-value=7.7e-47  Score=351.48  Aligned_cols=335  Identities=28%  Similarity=0.459  Sum_probs=279.0

Q ss_pred             ceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCC
Q 018075           15 NMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE   93 (361)
Q Consensus        15 ~~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   93 (361)
                      ++++++.+. +.++++++|.|.++++||+|||.++|+|++|++...|...    ..+|+++|||++|+|+++|+++++++
T Consensus         3 ~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~----~~~p~i~G~e~~G~V~~vG~~v~~~~   78 (365)
T cd08277           3 CKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA----TLFPVILGHEGAGIVESVGEGVTNLK   78 (365)
T ss_pred             cEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC----CCCCeecccceeEEEEeeCCCCccCC
Confidence            466667654 5699999999999999999999999999999998876432    35689999999999999999999999


Q ss_pred             CCCEEEecCCcCCCCCccccCCCCCCCCCccccCC-------------------CCCCCceeEEEEecCCceEECCCCCC
Q 018075           94 VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS-------------------PPTNGSLAHKVVHPAKLCYKLPDNVS  154 (361)
Q Consensus        94 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~g~~~~~~~~~~~~~~~vP~~~~  154 (361)
                      +||+|++.+..+|++|.+|..|.+.+|++..+...                   ....|+|+||++++.+.++++|++++
T Consensus        79 ~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~  158 (365)
T cd08277          79 PGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAP  158 (365)
T ss_pred             CCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCCCC
Confidence            99999998888999999999999999998653311                   01258999999999999999999999


Q ss_pred             cccccccc-hhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCC
Q 018075          155 LEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST  232 (361)
Q Consensus       155 ~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~  232 (361)
                      +++|+.+. ++.+||+++ +..++++|++|||+|+|++|++++|+|+.+|+.+|+++++++++.++++++|++.+++...
T Consensus       159 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~~  238 (365)
T cd08277         159 LEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKD  238 (365)
T ss_pred             HHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEecccc
Confidence            99998665 788899886 4588999999999999999999999999999977899999999999999999988876543


Q ss_pred             CccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCC-CEEEEEccCCC-CcceechHhhhcCcEEEEeecC--
Q 018075          233 DIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRY--  308 (361)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~--  308 (361)
                      ...++.+.++++.   +.++|++||++|....+..++++++++ |+++.+|...+ ..++....+.. +.++.+++.+  
T Consensus       239 ~~~~~~~~~~~~~---~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~i~g~~~~~~  314 (365)
T cd08277         239 SDKPVSEVIREMT---GGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLIL-GRTWKGSFFGGF  314 (365)
T ss_pred             ccchHHHHHHHHh---CCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhh-CCEEEeeecCCC
Confidence            2233444554443   368999999999877889999999885 99999997543 22334444443 7888887654  


Q ss_pred             --CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075          309 --RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  360 (361)
Q Consensus       309 --~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~  360 (361)
                        ..++++++++++++.++..+.++++|+|  +++++|++.+++++ ..|++++
T Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l--~~~~~A~~~~~~~~-~~k~~i~  365 (365)
T cd08277         315 KSRSDVPKLVSKYMNKKFDLDELITHVLPF--EEINKGFDLMKSGE-CIRTVIT  365 (365)
T ss_pred             ChHHHHHHHHHHHHCCCcChhHheeeEEch--hhHHHHHHHHHCCC-CceEeeC
Confidence              3468899999999998878889999999  99999999999886 4688874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>PLN02702 L-idonate 5-dehydrogenase

Probab=100.00  E-value=2.3e-46  Score=348.46  Aligned_cols=353  Identities=78%  Similarity=1.330  Sum_probs=297.8

Q ss_pred             cCCcccceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCC
Q 018075            9 EGDKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSE   88 (361)
Q Consensus         9 ~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   88 (361)
                      +...++++++|+.+++.+++++.+.|++.++||+|||.++++|++|++...+...+......|.++|+|++|+|+++|++
T Consensus        12 ~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   91 (364)
T PLN02702         12 SGVEEENMAAWLVGVNTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSE   91 (364)
T ss_pred             cccccccceEEEecCCceEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCC
Confidence            35668899999999999999999999999999999999999999999887653322222346789999999999999999


Q ss_pred             CCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHHHH
Q 018075           89 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGV  168 (361)
Q Consensus        89 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~  168 (361)
                      +++|++||+|++.+...|+.|..|+.|....|+...+++.....|+|++|+.++.+.++++|+++++++|++..++++++
T Consensus        92 v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~~~~~~a~  171 (364)
T PLN02702         92 VKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMCEPLSVGV  171 (364)
T ss_pred             CCCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHHHhhhhHHHHHH
Confidence            99999999999998899999999999999999986655544457999999999999999999999999988656777788


Q ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhc
Q 018075          169 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       169 ~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      ++++..++++|++|||+|+|++|++++++|+..|+..+++++.++++.++++++|++..+++.....++.+.+.++....
T Consensus       172 ~~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  251 (364)
T PLN02702        172 HACRRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQKAM  251 (364)
T ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCcccccHHHHHHHHhhhc
Confidence            88866889999999999999999999999999999778889899999999999999988776544445655555443333


Q ss_pred             CCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCC
Q 018075          249 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKP  328 (361)
Q Consensus       249 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~~~~~~  328 (361)
                      +.++|++||++|+...+..++++|+++|+++.+|.......+.......+++++.+++.....++.++++++++.+.+.+
T Consensus       252 ~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~  331 (364)
T PLN02702        252 GGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVPLTPAAAREVDVVGVFRYRNTWPLCLEFLRSGKIDVKP  331 (364)
T ss_pred             CCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCCcccHHHHHhCccEEEEeccChHHHHHHHHHHHcCCCCchH
Confidence            56899999999976689999999999999999986543333445567788999999876667888999999999986556


Q ss_pred             ceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          329 LITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       329 ~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      .+.+.|+++++++++|++.+.+++..+|+++.+
T Consensus       332 ~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~~  364 (364)
T PLN02702        332 LITHRFGFSQKEVEEAFETSARGGNAIKVMFNL  364 (364)
T ss_pred             heEEEeccChHHHHHHHHHHhcCCCceEEEEeC
Confidence            677887776689999999999988889999863

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=100.00  E-value=7.5e-47  Score=349.58  Aligned_cols=333  Identities=23%  Similarity=0.436  Sum_probs=278.3

Q ss_pred             EEeeCCc-eEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCE
Q 018075           19 WLLGIKT-LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDR   97 (361)
Q Consensus        19 ~~~~~~~-l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~   97 (361)
                      ++.+++. ++++++|.|.++++||+|||.++|+|++|++...+...  ....+|+++|||++|+|+++|++++.+ +||+
T Consensus         3 ~~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~--~~~~~p~i~GhE~~G~V~~vG~~v~~~-~Gdr   79 (349)
T TIGR03201         3 MMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVR--TNHALPLALGHEISGRVIQAGAGAASW-IGKA   79 (349)
T ss_pred             eEecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCC--ccCCCCeeccccceEEEEEeCCCcCCC-CCCE
Confidence            4555654 89999999999999999999999999999987643211  113568999999999999999999877 9999


Q ss_pred             EEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCC------CCCccccccc-chhHHHHHH
Q 018075           98 VALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPD------NVSLEEGAMC-EPLSVGVHA  170 (361)
Q Consensus        98 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~------~~~~~~aa~~-~~~~~a~~~  170 (361)
                      |++.+..+|++|.+|+.|++++|+...+.+. ...|+|+||+.++.+.++++|+      ++++++++.+ .++.++|++
T Consensus        80 V~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~-~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a  158 (349)
T TIGR03201        80 VIVPAVIPCGECELCKTGRGTICRAQKMPGN-DMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQA  158 (349)
T ss_pred             EEECCCCCCCCChhhhCcCcccCCCCCccCc-CCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHH
Confidence            9999999999999999999999998766543 2469999999999999999999      8888887755 578899999


Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCc-cchhHHHHHHHhhcC
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDI-EDVDTDVGKIQNAMG  249 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~-~~~~~~~~~~~~~~~  249 (361)
                      ++..++++|++|+|+|+|++|++++|+|+.+|+ .+++++.++++.++++++|++.++++.... .++.+.++++.  .+
T Consensus       159 ~~~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t--~~  235 (349)
T TIGR03201       159 AVQAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFA--KA  235 (349)
T ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhc--cc
Confidence            888889999999999999999999999999999 588899999999999999998877653321 23444444432  34


Q ss_pred             CCcc----EEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCC
Q 018075          250 SGID----VSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKI  324 (361)
Q Consensus       250 ~~~d----~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~  324 (361)
                      .++|    ++|||+|+...++.++++|+++|+++.+|.......+....++.++.++.+.+.. .++++++++++++|++
T Consensus       236 ~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~g~i  315 (349)
T TIGR03201       236 RGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAKTEYRLSNLMAFHARALGNWGCPPDRYPAALDLVLDGKI  315 (349)
T ss_pred             CCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCCcccCHHHHhhcccEEEEEecCCHHHHHHHHHHHHcCCC
Confidence            6776    8999999887888899999999999999976554455556677778888888764 5679999999999999


Q ss_pred             CCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          325 DVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       325 ~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      ++.+.++ .|+|  +++++|++.+.+++..+|++++.
T Consensus       316 ~~~~~i~-~~~l--~~~~~A~~~~~~~~~~~k~~~~~  349 (349)
T TIGR03201       316 QLGPFVE-RRPL--DQIEHVFAAAHHHKLKRRAILTP  349 (349)
T ss_pred             CcccceE-EecH--HHHHHHHHHHHcCCccceEEecC
Confidence            7766664 6888  99999999999998899999863

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd08230 glucose_DH Glucose dehydrogenase

Probab=100.00  E-value=8.7e-47  Score=350.05  Aligned_cols=330  Identities=25%  Similarity=0.363  Sum_probs=264.6

Q ss_pred             eEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCC
Q 018075           16 MAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEV   94 (361)
Q Consensus        16 ~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   94 (361)
                      +++++..+ ..++++++|.|+|+++||||||+++|+|++|++.++|..........|.++|||++|+|+++|++ +.|++
T Consensus         2 ka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~v   80 (355)
T cd08230           2 KAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLSP   80 (355)
T ss_pred             ceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCCC
Confidence            44555533 23999999999999999999999999999999998875321111245889999999999999999 99999


Q ss_pred             CCEEEecCCcCCCCCccccCCCCCCCCCcccc--CCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHHHHHHHH
Q 018075           95 GDRVALEPGISCGHCSLCKAGSYNLCPEMRFF--GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACR  172 (361)
Q Consensus        95 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~  172 (361)
                      ||||+..+...|+.|.+|..|++.+|++..++  +.....|+|+||++++++.++++|++++ +.+++..++++++.++.
T Consensus        81 GdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~-~~a~~~~p~~~~~~a~~  159 (355)
T cd08230          81 GDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA-DVGVLLEPLSVVEKAIE  159 (355)
T ss_pred             CCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC-cceeecchHHHHHHHHH
Confidence            99999988889999999999999999976543  2223479999999999999999999999 66666667766555442


Q ss_pred             h-------cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeC---ChhHHHHHHHcCCCEEeecCCCccchhHHHH
Q 018075          173 R-------ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDV---DVQRLSIARNLGADETAKVSTDIEDVDTDVG  242 (361)
Q Consensus       173 ~-------~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~---~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~  242 (361)
                      .       .++++|++|||+|+|++|++++|+||.+|+ .++++++   +++|.++++++|++.+ ++..  +++.+ . 
T Consensus       160 ~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~~~Ga~~v-~~~~--~~~~~-~-  233 (355)
T cd08230         160 QAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVEELGATYV-NSSK--TPVAE-V-  233 (355)
T ss_pred             HHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHHcCCEEe-cCCc--cchhh-h-
Confidence            2       336799999999999999999999999999 5788876   6889999999999863 4322  23322 1 


Q ss_pred             HHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC--Cccee----chHhhhcCcEEEEeecC-CCcHHHH
Q 018075          243 KIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT--EMTVA----LTPAAAREVDVIGIFRY-RSTWPLC  315 (361)
Q Consensus       243 ~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~----~~~~~~~~~~i~~~~~~-~~~~~~~  315 (361)
                        .  ...++|+|||++|++..+..+++.|+++|+++.+|....  ..+++    ...++++++++.|+... .++++++
T Consensus       234 --~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~  309 (355)
T cd08230         234 --K--LVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNANKRHFEQA  309 (355)
T ss_pred             --h--hcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCCchhhHHHH
Confidence              1  135899999999987788999999999999999997654  22333    34577899999998765 5688999


Q ss_pred             HHHHHcCCC----CCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          316 IEFLRSGKI----DVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       316 ~~~l~~g~~----~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      ++++.++.+    ..++.++++|+|  +++++|++.++++.  +|+|+++
T Consensus       310 ~~~l~~~~~~~~~~~~~~i~~~~~l--~~~~~a~~~~~~~~--~K~v~~~  355 (355)
T cd08230         310 VEDLAQWKYRWPGVLERLITRRVPL--EEFAEALTEKPDGE--IKVVIEW  355 (355)
T ss_pred             HHHHHhcccccccchHHheeeeecH--HHHHHHHHhcccCC--eEEEeeC
Confidence            999998872    246778899999  99999999987654  5999874

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=1.3e-46  Score=344.66  Aligned_cols=312  Identities=24%  Similarity=0.335  Sum_probs=268.1

Q ss_pred             CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCC
Q 018075           24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPG  103 (361)
Q Consensus        24 ~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~  103 (361)
                      ..++++++|.|+|+++||+|||.++|+|++|++...|....   ..+|.++|||++|+|+++|++++++++||+|++.+.
T Consensus        13 ~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~   89 (329)
T TIGR02822        13 GPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPV---HRPRVTPGHEVVGEVAGRGADAGGFAVGDRVGIAWL   89 (329)
T ss_pred             CCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCC---CCCCccCCcceEEEEEEECCCCcccCCCCEEEEcCc
Confidence            46899999999999999999999999999999988775321   234789999999999999999999999999987654


Q ss_pred             -cCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHHHhcCCCCCCE
Q 018075          104 -ISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRRANVGPETN  181 (361)
Q Consensus       104 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l~~~~~~~g~~  181 (361)
                       ..|+.|.+|+.|++++|+++.+++. ..+|+|+||+.++++.++++|+++++++++.+ .++.+||++++++++++|++
T Consensus        90 ~~~c~~c~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~g~~  168 (329)
T TIGR02822        90 RRTCGVCRYCRRGAENLCPASRYTGW-DTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALLRASLPPGGR  168 (329)
T ss_pred             cCcCCCChHHhCcCcccCCCcccCCc-ccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHHHhcCCCCCCE
Confidence             4799999999999999999877653 35799999999999999999999999988854 57888999998788999999


Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccCC
Q 018075          182 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGF  261 (361)
Q Consensus       182 vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~  261 (361)
                      |||+|+|++|++++|+|+.+|+ .+++++++++|.++++++|++.+++...  .            ...++|+++++.+.
T Consensus       169 VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~~~--~------------~~~~~d~~i~~~~~  233 (329)
T TIGR02822       169 LGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGGAYD--T------------PPEPLDAAILFAPA  233 (329)
T ss_pred             EEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceeccccc--c------------CcccceEEEECCCc
Confidence            9999999999999999999999 5888899999999999999998776321  0            02468999998887


Q ss_pred             hHHHHHHHHhhcCCCEEEEEccCCC-CcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCCCceEEEecCChh
Q 018075          262 DKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQK  339 (361)
Q Consensus       262 ~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~  339 (361)
                      ...++.++++|+++|+++.+|.... ...+....+..++.++.++... ..++.++++++++|+++   .++++|+|  +
T Consensus       234 ~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~---~i~~~~~l--~  308 (329)
T TIGR02822       234 GGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSNTRADAREFLELAAQHGVR---VTTHTYPL--S  308 (329)
T ss_pred             HHHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEeecCCHHHHHHHHHHHHhCCCe---eEEEEEeH--H
Confidence            7799999999999999999997433 2234455667788999988765 45788899999999983   35788999  9


Q ss_pred             hHHHHHHHHhcCCCceEEEE
Q 018075          340 EIEDAFEISAQGGNAIKVMF  359 (361)
Q Consensus       340 ~~~~a~~~l~~~~~~gkvvi  359 (361)
                      ++++|++.+.+++..||+|+
T Consensus       309 ~~~~A~~~~~~~~~~Gkvvl  328 (329)
T TIGR02822       309 EADRALRDLKAGRFDGAAVL  328 (329)
T ss_pred             HHHHHHHHHHcCCCceEEEe
Confidence            99999999999999999987

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=1.5e-47  Score=316.23  Aligned_cols=308  Identities=27%  Similarity=0.353  Sum_probs=265.1

Q ss_pred             cccceEEEEe---eCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCC
Q 018075           12 KNQNMAAWLL---GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSE   88 (361)
Q Consensus        12 ~~~~~~~~~~---~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   88 (361)
                      |+..+-.+++   +++.+++++.|+|+|.|+|+.||..|+|+|+.|..+.+|.+.   +.+.|++||.|.+|+|+++|++
T Consensus         6 p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~---~~plPytpGmEaaGvVvAvG~g   82 (336)
T KOG1197|consen    6 PPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYD---PAPLPYTPGMEAAGVVVAVGEG   82 (336)
T ss_pred             CchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccC---CCCCCcCCCcccceEEEEecCC
Confidence            4566666666   458899999999999999999999999999999998887542   4688999999999999999999


Q ss_pred             CCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHH
Q 018075           89 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVG  167 (361)
Q Consensus        89 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a  167 (361)
                      |+++++||||...                            ...|.|+|++.+|...++++|+.+++.+||++ ....||
T Consensus        83 vtdrkvGDrVayl----------------------------~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTA  134 (336)
T KOG1197|consen   83 VTDRKVGDRVAYL----------------------------NPFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTA  134 (336)
T ss_pred             ccccccccEEEEe----------------------------ccchhhheeccccceeeccCCcccCHHHHHHHHHHHHHH
Confidence            9999999999863                            35899999999999999999999999999844 588999


Q ss_pred             HHHHHh-cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHH
Q 018075          168 VHACRR-ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       168 ~~~l~~-~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~  245 (361)
                      |..+++ .++++|++|||+. +|++|++++|++++.|+ ++|++.+..+|++.+++.|+.+.|+++.  +|+.+.+.+++
T Consensus       135 y~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~h~I~y~~--eD~v~~V~kiT  211 (336)
T KOG1197|consen  135 YMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAEHPIDYST--EDYVDEVKKIT  211 (336)
T ss_pred             HHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCcceeeccc--hhHHHHHHhcc
Confidence            998887 8999999999996 79999999999999999 6888889999999999999999999755  78888888776


Q ss_pred             hhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC-cceechHhhhcCcEEEEe-----ecCCC----cHHHH
Q 018075          246 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGI-----FRYRS----TWPLC  315 (361)
Q Consensus       246 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~-----~~~~~----~~~~~  315 (361)
                        .+.|+|+++|++|.+ ++..++.+|++.|++|.+|..++. .+++++.+..+.+.+.-.     ...+.    -..++
T Consensus       212 --ngKGVd~vyDsvG~d-t~~~sl~~Lk~~G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl  288 (336)
T KOG1197|consen  212 --NGKGVDAVYDSVGKD-TFAKSLAALKPMGKMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARL  288 (336)
T ss_pred             --CCCCceeeeccccch-hhHHHHHHhccCceEEEeccccCCCCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHH
Confidence              488999999999977 999999999999999999977653 345555555555444322     22222    24567


Q ss_pred             HHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075          316 IEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  360 (361)
Q Consensus       316 ~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~  360 (361)
                      +.++.+|.+  ++.+.+.|+|  +++.+|+.++++++..||+++-
T Consensus       289 ~alvnsg~l--k~~I~~~ypl--s~vadA~~diesrktvGkvlLl  329 (336)
T KOG1197|consen  289 FALVNSGHL--KIHIDHVYPL--SKVADAHADIESRKTVGKVLLL  329 (336)
T ss_pred             HHHhhcCcc--ceeeeeecch--HHHHHHHHHHHhhhccceEEEe
Confidence            888889999  7888999999  9999999999999999999874

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=100.00  E-value=2.8e-46  Score=344.32  Aligned_cols=325  Identities=23%  Similarity=0.328  Sum_probs=257.5

Q ss_pred             cceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccc-cCCCCcccCcceeEEEEEeCCCCCCC
Q 018075           14 QNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANF-IVKKPMVIGHECAGIIEEVGSEVKSL   92 (361)
Q Consensus        14 ~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~-~~~~p~~~G~e~~G~V~~vG~~v~~~   92 (361)
                      ..+++++.+|+.++++++|.|+ +++||+|||+++|||++|++..+|...... ....|+++|||++|+|+++|.+  .|
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~~   78 (341)
T cd08237           2 INQVYRLVRPKFFEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--TY   78 (341)
T ss_pred             cccceEEeccceEEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--cc
Confidence            3567788899999999999995 999999999999999999999887532111 1357999999999999998875  69


Q ss_pred             CCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHHHHHHHH
Q 018075           93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACR  172 (361)
Q Consensus        93 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~  172 (361)
                      ++||||+..+...|+ |+.|  +..++|+...+++. ...|+|+||++++++.++++|+++++++|+++.++++|+++++
T Consensus        79 ~vGdrV~~~~~~~~~-~~~~--~~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~~~~~~~a~~a~~  154 (341)
T cd08237          79 KVGTKVVMVPNTPVE-KDEI--IPENYLPSSRFRSS-GYDGFMQDYVFLPPDRLVKLPDNVDPEVAAFTELVSVGVHAIS  154 (341)
T ss_pred             CCCCEEEECCCCCch-hccc--chhccCCCcceeEe-cCCCceEEEEEEchHHeEECCCCCChHHhhhhchHHHHHHHHH
Confidence            999999998777776 4444  45567887655542 2469999999999999999999999999888889999999885


Q ss_pred             h---cCCCCCCEEEEECCCHHHHHHHHHHHH-cCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhc
Q 018075          173 R---ANVGPETNVMIMGSGPIGLVTLLAARA-FGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       173 ~---~~~~~g~~vlI~G~g~~G~~ai~la~~-~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      .   ..+++|++|||.|+|++|++++|+++. .|+.+|++++.+++|++++++.+++..++      +       +.  .
T Consensus       155 ~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~------~-------~~--~  219 (341)
T cd08237         155 RFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLID------D-------IP--E  219 (341)
T ss_pred             HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehh------h-------hh--h
Confidence            3   457899999999999999999999986 66657888999999999998766543211      1       11  1


Q ss_pred             CCCccEEEEccCC---hHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcC--
Q 018075          249 GSGIDVSFDCVGF---DKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSG--  322 (361)
Q Consensus       249 ~~~~d~vld~~g~---~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g--  322 (361)
                      ..++|+|||++|+   +..++.+++.|+++|+++.+|......+++...++.+++++.++... .++++++++++++|  
T Consensus       220 ~~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~~~  299 (341)
T cd08237         220 DLAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEYPVPINTRMVLEKGLTLVGSSRSTREDFERAVELLSRNPE  299 (341)
T ss_pred             ccCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCCCcccCHHHHhhCceEEEEecccCHHHHHHHHHHHHhCCc
Confidence            2369999999994   45789999999999999999976544455566678899999998765 56789999999999  


Q ss_pred             -CCCCCCceEEEecCC-hhhHHHHHHHHhcCCCceEEEEeC
Q 018075          323 -KIDVKPLITHRFGFT-QKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       323 -~~~~~~~~~~~~~l~-~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                       ...+++.++++|+|+ ++++.++++.+.++ ..||+|+++
T Consensus       300 ~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~  339 (341)
T cd08237         300 VAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEW  339 (341)
T ss_pred             ccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEe
Confidence             334578888989871 23455555555544 678999863

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=6.2e-45  Score=337.42  Aligned_cols=329  Identities=23%  Similarity=0.332  Sum_probs=269.3

Q ss_pred             ceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCC
Q 018075           15 NMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE   93 (361)
Q Consensus        15 ~~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   93 (361)
                      +.+++..++ +.+.+++++.|+++++||+|||.++|+|++|++.+.|...   ....|.++|||++|+|+++|+++++|+
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~---~~~~p~i~G~E~~G~Vv~vG~~v~~~~   86 (357)
T PLN02514         10 TTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLG---MSNYPMVPGHEVVGEVVEVGSDVSKFT   86 (357)
T ss_pred             EEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcC---cCCCCccCCceeeEEEEEECCCccccc
Confidence            566666666 6799999999999999999999999999999998876431   124688999999999999999999999


Q ss_pred             CCCEEEecCCc-CCCCCccccCCCCCCCCCccccC------CCCCCCceeEEEEecCCceEECCCCCCccccccc-chhH
Q 018075           94 VGDRVALEPGI-SCGHCSLCKAGSYNLCPEMRFFG------SPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLS  165 (361)
Q Consensus        94 ~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~  165 (361)
                      +||+|++.+.. .|++|.+|+.|++.+|++..+..      +....|+|+||+.++...++++|+++++++|+.+ ..+.
T Consensus        87 ~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~  166 (357)
T PLN02514         87 VGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGV  166 (357)
T ss_pred             CCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhhhhhHH
Confidence            99999875543 69999999999999999863211      1124699999999999999999999999998855 4678


Q ss_pred             HHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHH-HHHHHcCCCEEeecCCCccchhHHHHH
Q 018075          166 VGVHACRR-ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRL-SIARNLGADETAKVSTDIEDVDTDVGK  243 (361)
Q Consensus       166 ~a~~~l~~-~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~-~~~~~lg~~~~~~~~~~~~~~~~~~~~  243 (361)
                      +||+++.. ...++|++++|+|+|++|++++|+||.+|++ +++++.++++. ..++++|++..++...  .   ..+.+
T Consensus       167 ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~~-vi~~~~~~~~~~~~~~~~Ga~~~i~~~~--~---~~~~~  240 (357)
T PLN02514        167 TVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHH-VTVISSSDKKREEALEHLGADDYLVSSD--A---AEMQE  240 (357)
T ss_pred             HHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHhcCCcEEecCCC--h---HHHHH
Confidence            89998866 5568999999999999999999999999995 66666666655 4556799987665321  1   22332


Q ss_pred             HHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcC
Q 018075          244 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSG  322 (361)
Q Consensus       244 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g  322 (361)
                      .    ..++|++||++|....++.++++++++|+++.+|......++....+..++.++.+++.. ..+++++++++++|
T Consensus       241 ~----~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g  316 (357)
T PLN02514        241 A----ADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMLMLGRKVITGSFIGSMKETEEMLEFCKEK  316 (357)
T ss_pred             h----cCCCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCCCcccHHHHhhCCcEEEEEecCCHHHHHHHHHHHHhC
Confidence            2    237999999999766889999999999999999976544455566678899999998766 45789999999999


Q ss_pred             CCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          323 KIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       323 ~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      ++  ++.+ +.|+|  +++.+|++.+.++...||+++++
T Consensus       317 ~l--~~~i-~~~~l--~~~~~A~~~~~~~~~~gk~v~~~  350 (357)
T PLN02514        317 GL--TSMI-EVVKM--DYVNTAFERLEKNDVRYRFVVDV  350 (357)
T ss_pred             CC--cCcE-EEEcH--HHHHHHHHHHHcCCCceeEEEEc
Confidence            87  5555 57888  99999999999998889999864

>PRK10083 putative oxidoreductase; Provisional

Probab=100.00  E-value=3e-44  Score=331.28  Aligned_cols=335  Identities=27%  Similarity=0.523  Sum_probs=279.0

Q ss_pred             ceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCC
Q 018075           15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEV   94 (361)
Q Consensus        15 ~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   94 (361)
                      |+++++.+++.+++++++.|.|+++||+||+.++++|++|++...|....   .+.|.++|||++|+|+++|++++.+++
T Consensus         1 m~a~~~~~~~~~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~---~~~p~i~G~e~~G~V~~vG~~v~~~~~   77 (339)
T PRK10083          1 MKSIVIEKPNSLAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPF---AKYPRVIGHEFFGVIDAVGEGVDAARI   77 (339)
T ss_pred             CeEEEEecCCeeEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCc---CCCCcccccceEEEEEEECCCCccCCC
Confidence            35677778899999999999999999999999999999999887664321   246899999999999999999999999


Q ss_pred             CCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHHHHHHHHhc
Q 018075           95 GDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRA  174 (361)
Q Consensus        95 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~~~  174 (361)
                      ||+|+..+...|+.|.+|..+++.+|+++.+++. ...|+|+||+.++.+.++++|+++++++++.+.++.+++.+++..
T Consensus        78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~~~~~~~~a~~~~~~~  156 (339)
T PRK10083         78 GERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGV-HRDGGFSEYAVVPAKNAHRIPDAIADQYAVMVEPFTIAANVTGRT  156 (339)
T ss_pred             CCEEEEccccCCCCCccccCcCcccCCCCceEEE-ccCCcceeeEEechHHeEECcCCCCHHHHhhhchHHHHHHHHHhc
Confidence            9999999988999999999999999998876543 246999999999999999999999998887666788888766678


Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHH-cCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCcc
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARA-FGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~-~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      ++++|++|||+|+|++|++++|+|+. +|+..++++++++++.++++++|++.++++.+  .++.+.+..    .+.++|
T Consensus       157 ~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~--~~~~~~~~~----~g~~~d  230 (339)
T PRK10083        157 GPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ--EPLGEALEE----KGIKPT  230 (339)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc--ccHHHHHhc----CCCCCC
Confidence            89999999999999999999999996 69987888999999999999999988876532  344443321    134567


Q ss_pred             EEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceEEE
Q 018075          254 VSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHR  333 (361)
Q Consensus       254 ~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~  333 (361)
                      ++||++|.+..+...+++|+++|+++.+|.......+....+..+++++.+.....+.++.+++++++|++.+...+.+.
T Consensus       231 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~  310 (339)
T PRK10083        231 LIIDAACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKELSIFSSRLNANKFPVVIDWLSKGLIDPEKLITHT  310 (339)
T ss_pred             EEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCceecHHHHhhcceEEEEEecChhhHHHHHHHHHcCCCChHHheeee
Confidence            99999997768999999999999999998654332333334455777777765556789999999999999654457788


Q ss_pred             ecCChhhHHHHHHHHhcC-CCceEEEEeC
Q 018075          334 FGFTQKEIEDAFEISAQG-GNAIKVMFNL  361 (361)
Q Consensus       334 ~~l~~~~~~~a~~~l~~~-~~~gkvvi~~  361 (361)
                      |++  +++++|++.++++ ...+|+++++
T Consensus       311 ~~l--~~~~~a~~~~~~~~~~~~kvvv~~  337 (339)
T PRK10083        311 FDF--QHVADAIELFEKDQRHCCKVLLTF  337 (339)
T ss_pred             ecH--HHHHHHHHHHhcCCCceEEEEEec
Confidence            888  9999999999865 4578999863

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=100.00  E-value=1.1e-44  Score=329.00  Aligned_cols=306  Identities=20%  Similarity=0.277  Sum_probs=247.5

Q ss_pred             cceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeecC-cchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCC
Q 018075           14 QNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGIC-GSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL   92 (361)
Q Consensus        14 ~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~-~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   92 (361)
                      +++++++.+++.+++++.|.|+|+++||+|||.++|+| .+|++...|..........|+++|||++|+|+++|+++ +|
T Consensus         1 ~~ka~~~~~~~~l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~~   79 (308)
T TIGR01202         1 KTQAIVLSGPNQIELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-GF   79 (308)
T ss_pred             CceEEEEeCCCeEEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-CC
Confidence            35677778889999999999999999999999999997 69998777653211112569999999999999999999 59


Q ss_pred             CCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHHHHHHHH
Q 018075           93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACR  172 (361)
Q Consensus        93 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~  172 (361)
                      ++||||+..+    ..|..+..               ...|+|+||++++++.++++|++++++. +++.++.+||++++
T Consensus        80 ~vGdrV~~~~----~~c~~~~~---------------~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~~~~~a~~~~~  139 (308)
T TIGR01202        80 RPGDRVFVPG----SNCYEDVR---------------GLFGGASKRLVTPASRVCRLDPALGPQG-ALLALAATARHAVA  139 (308)
T ss_pred             CCCCEEEEeC----cccccccc---------------ccCCcccceEEcCHHHceeCCCCCCHHH-HhhhHHHHHHHHHH
Confidence            9999998732    12221110               1259999999999999999999999764 55566789999997


Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCc
Q 018075          173 RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       173 ~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      +.. .+++++||+|+|++|++++|+||.+|++.|++++.++++++.+.++   .++++..   .           .+.++
T Consensus       140 ~~~-~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i~~~~---~-----------~~~g~  201 (308)
T TIGR01202       140 GAE-VKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVLDPEK---D-----------PRRDY  201 (308)
T ss_pred             hcc-cCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---cccChhh---c-----------cCCCC
Confidence            643 4689999999999999999999999997777888888887766553   2232211   0           14579


Q ss_pred             cEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCCCceE
Q 018075          253 DVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLIT  331 (361)
Q Consensus       253 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~  331 (361)
                      |+||||+|++..++.++++++++|+++.+|......+++...++.+++++.++..+ .++++++++++++|++++.+.++
T Consensus       202 Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~g~i~~~~~it  281 (308)
T TIGR01202       202 RAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTEPVNFDFVPAFMKEARLRIAAEWQPGDLHAVRELIESGALSLDGLIT  281 (308)
T ss_pred             CEEEECCCCHHHHHHHHHhhhcCcEEEEEeecCCCcccccchhhhcceEEEEecccchhHHHHHHHHHHcCCCChhhccc
Confidence            99999999876789999999999999999976554556666778888999887765 57799999999999998888899


Q ss_pred             EEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075          332 HRFGFTQKEIEDAFEISAQGGNAIKVMFN  360 (361)
Q Consensus       332 ~~~~l~~~~~~~a~~~l~~~~~~gkvvi~  360 (361)
                      +.|+|  +++++|++.+.++...+|++++
T Consensus       282 ~~~~l--~~~~~A~~~~~~~~~~~Kv~~~  308 (308)
T TIGR01202       282 HQRPA--SDAAEAYMTAFSDPDCLKMILD  308 (308)
T ss_pred             eeecH--HHHHHHHHHHhcCcCceEEEeC
Confidence            99999  9999999998877677999874

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=100.00  E-value=7.3e-44  Score=331.43  Aligned_cols=337  Identities=32%  Similarity=0.555  Sum_probs=279.7

Q ss_pred             eEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCC---
Q 018075           16 MAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS---   91 (361)
Q Consensus        16 ~~~~~~~~~-~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~---   91 (361)
                      +++++.+++ .+++++++.|.|+++||+|||.++++|++|+....|....   ...|.++|||++|+|+++|++++.   
T Consensus         2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~~~~~   78 (361)
T cd08231           2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPR---VPLPIILGHEGVGRVVALGGGVTTDVA   78 (361)
T ss_pred             eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCC---CCCCcccccCCceEEEEeCCCcccccc
Confidence            456667665 8999999999999999999999999999999988765321   356889999999999999999986   


Q ss_pred             ---CCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCC------CCCCceeEEEEecCC-ceEECCCCCCccccccc
Q 018075           92 ---LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP------PTNGSLAHKVVHPAK-LCYKLPDNVSLEEGAMC  161 (361)
Q Consensus        92 ---~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~~~~~~~~~~~-~~~~vP~~~~~~~aa~~  161 (361)
                         |++||+|++.+..+|+.|..|+.++++.|+...+++..      ...|+|+||+.++++ .++++|+++++++|+++
T Consensus        79 ~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~  158 (361)
T cd08231          79 GEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPA  158 (361)
T ss_pred             CCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHHHHh
Confidence               99999999998889999999999999999987666531      246999999999996 79999999998888866


Q ss_pred             -chhHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCcc-chh
Q 018075          162 -EPLSVGVHACRR-ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIE-DVD  238 (361)
Q Consensus       162 -~~~~~a~~~l~~-~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~-~~~  238 (361)
                       .++.+||+++++ ...++|++|||+|+|++|++++++|+.+|+..++++++++++.++++++|++.++++..... ++.
T Consensus       159 ~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~  238 (361)
T cd08231         159 NCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDELPDPQRR  238 (361)
T ss_pred             cCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcCcccccHHHH
Confidence             689999999977 44569999999999999999999999999966888888999999999999988776543211 111


Q ss_pred             HHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC--cceechHhhhcCcEEEEeecC-CCcHHHH
Q 018075          239 TDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE--MTVALTPAAAREVDVIGIFRY-RSTWPLC  315 (361)
Q Consensus       239 ~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~~~~-~~~~~~~  315 (361)
                      ..+.++  +.+.++|++||++|+...++..+++++++|+++.+|.....  ..+....+..+++++.+++.+ .++++++
T Consensus       239 ~~i~~~--~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (361)
T cd08231         239 AIVRDI--TGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYDPSHLYRA  316 (361)
T ss_pred             HHHHHH--hCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEcccCCchhHHHH
Confidence            233333  23568999999998766889999999999999999865432  233334568889999988765 6789999


Q ss_pred             HHHHHcC--CCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075          316 IEFLRSG--KIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  360 (361)
Q Consensus       316 ~~~l~~g--~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~  360 (361)
                      ++++.++  .+.+.+.+++.|++  +++++|++.++++. .+|+||+
T Consensus       317 ~~~~~~~~~~~~~~~~i~~~~~l--~~~~~a~~~~~~~~-~~k~vi~  360 (361)
T cd08231         317 VRFLERTQDRFPFAELVTHRYPL--EDINEALELAESGT-ALKVVID  360 (361)
T ss_pred             HHHHHhccCcCCchhheeeeeeH--HHHHHHHHHHHcCC-ceEEEeC
Confidence            9999998  55567778889999  99999999998886 4899986

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=100.00  E-value=1.4e-43  Score=334.07  Aligned_cols=329  Identities=22%  Similarity=0.351  Sum_probs=262.1

Q ss_pred             cceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhh-cccccccc---cCCCCcccCcceeEEEEEeCCCC
Q 018075           14 QNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHF-KTMRCANF---IVKKPMVIGHECAGIIEEVGSEV   89 (361)
Q Consensus        14 ~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~-~g~~~~~~---~~~~p~~~G~e~~G~V~~vG~~v   89 (361)
                      .++++++.+++.++++++|.|.++++||+|||.++|+|++|++.+ .|......   ....|+++|||++|+|+++|++|
T Consensus         2 ~~~a~~~~~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v   81 (410)
T cd08238           2 KTKAWRMYGKGDLRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGKKW   81 (410)
T ss_pred             CcEEEEEEcCCceEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCCCc
Confidence            467888888889999999999999999999999999999999875 34311110   02468899999999999999999


Q ss_pred             C-CCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCC----ceEECCCCCCcccccccchh
Q 018075           90 K-SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAK----LCYKLPDNVSLEEGAMCEPL  164 (361)
Q Consensus        90 ~-~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~~vP~~~~~~~aa~~~~~  164 (361)
                      + +|++||||++.+...|+.|..|. +       .   + ...+|+|+||++++++    .++++|+++++++|+++.++
T Consensus        82 ~~~~~vGdrV~~~~~~~c~~~~~c~-~-------~---g-~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~epl  149 (410)
T cd08238          82 QGKYKPGQRFVIQPALILPDGPSCP-G-------Y---S-YTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPL  149 (410)
T ss_pred             cCCCCCCCEEEEcCCcCCCCCCCCC-C-------c---c-ccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcchH
Confidence            8 69999999998877787776552 1       1   1 1247999999999987    68999999999999876555


Q ss_pred             HHH---HHHH---------HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcC--CCEEEEEeCChhHHHHHHHc-------
Q 018075          165 SVG---VHAC---------RRANVGPETNVMIMG-SGPIGLVTLLAARAFG--APRIIITDVDVQRLSIARNL-------  222 (361)
Q Consensus       165 ~~a---~~~l---------~~~~~~~g~~vlI~G-~g~~G~~ai~la~~~g--~~~vv~v~~~~~~~~~~~~l-------  222 (361)
                      +++   +.++         ++.++++|++|+|+| +|++|++++|+|+.+|  +..|++++.+++|++.++++       
T Consensus       150 ~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~  229 (410)
T cd08238         150 SCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAAS  229 (410)
T ss_pred             HHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccc
Confidence            443   2222         346789999999998 6999999999999975  45689999999999999997       


Q ss_pred             -CCC-EEeecCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccC-CC--CcceechHhhh
Q 018075          223 -GAD-ETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA-KT--EMTVALTPAAA  297 (361)
Q Consensus       223 -g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~--~~~~~~~~~~~  297 (361)
                       |++ .++++.. ..++.+.++++.  .+.++|++||++|.+..++.++++++++|+++.++.. ..  ..+++...++.
T Consensus       230 ~Ga~~~~i~~~~-~~~~~~~v~~~t--~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~~~~~~~~~  306 (410)
T cd08238         230 RGIELLYVNPAT-IDDLHATLMELT--GGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAPLNFYNVHY  306 (410)
T ss_pred             cCceEEEECCCc-cccHHHHHHHHh--CCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCccccccHHHhhh
Confidence             665 3444321 134555555443  3568999999998877999999999999988876432 22  23455667888


Q ss_pred             cCcEEEEeecC-CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075          298 REVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  360 (361)
Q Consensus       298 ~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~  360 (361)
                      +++++.|+... ..+++++++++++|++++.+.++++|+|  +++++|++.+. ++..||+|+.
T Consensus       307 ~~~~i~g~~~~~~~~~~~~~~li~~g~i~~~~~it~~~~l--~~~~~A~~~~~-~~~~gKvvl~  367 (410)
T cd08238         307 NNTHYVGTSGGNTDDMKEAIDLMAAGKLNPARMVTHIGGL--NAAAETTLNLP-GIPGGKKLIY  367 (410)
T ss_pred             cCcEEEEeCCCCHHHHHHHHHHHHcCCCchhhcEEEEecH--HHHHHHHHHhh-ccCCceEEEE
Confidence            99999998765 5679999999999999888899999999  99999999999 7788999986

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=4.3e-43  Score=324.95  Aligned_cols=339  Identities=29%  Similarity=0.554  Sum_probs=280.4

Q ss_pred             ceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhccccccc------ccCCCCcccCcceeEEEEEeCCC
Q 018075           15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCAN------FIVKKPMVIGHECAGIIEEVGSE   88 (361)
Q Consensus        15 ~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~------~~~~~p~~~G~e~~G~V~~vG~~   88 (361)
                      |+++++++++++++++++.|++.+++|+||+.++++|++|+....|.....      ...+.|.++|+|++|+|+++|++
T Consensus         1 mka~~~~~~~~~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~   80 (350)
T cd08256           1 MRAVVCHGPQDYRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGEG   80 (350)
T ss_pred             CeeEEEecCCceEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCCC
Confidence            367778888889999999999999999999999999999998877642100      00146789999999999999999


Q ss_pred             CC--CCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCC-CCCCCceeEEEEecCC-ceEECCCCCCcccccccchh
Q 018075           89 VK--SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS-PPTNGSLAHKVVHPAK-LCYKLPDNVSLEEGAMCEPL  164 (361)
Q Consensus        89 v~--~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~-~~~~vP~~~~~~~aa~~~~~  164 (361)
                      ++  +|++||+|++.+..+|+.|..|+.|...+|+...+++. ....|+|++|+.++++ .++++|+++++++|+.+.++
T Consensus        81 v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~~~~~  160 (350)
T cd08256          81 AEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAILIEPL  160 (350)
T ss_pred             cccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHhhhhHH
Confidence            98  89999999999999999999999999999987655443 1257999999999988 67899999999888866788


Q ss_pred             HHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHH
Q 018075          165 SVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI  244 (361)
Q Consensus       165 ~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~  244 (361)
                      .++|++++..++++|++|||.|+|++|++++++|+.+|+..++++++++++.++++++|++.++++.  ..++.+.+.++
T Consensus       161 ~ta~~a~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~--~~~~~~~~~~~  238 (350)
T cd08256         161 ACALHAVDRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPP--EVDVVEKIKEL  238 (350)
T ss_pred             HHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEecCC--CcCHHHHHHHH
Confidence            8999998778899999999977899999999999999997888899999999999999998876643  24555555443


Q ss_pred             HhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHh-hhcCcEEEEeecCCCcHHHHHHHHHcCC
Q 018075          245 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPA-AAREVDVIGIFRYRSTWPLCIEFLRSGK  323 (361)
Q Consensus       245 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~l~~g~  323 (361)
                      .  .+.++|++||++|+...+..++++++++|+++.+|.......+....+ ..+++++.++......+.++++++++|.
T Consensus       239 ~--~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~  316 (350)
T cd08256         239 T--GGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPVTVDWSIIGDRKELDVLGSHLGPYCYPIAIDLIASGR  316 (350)
T ss_pred             h--CCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCCCccChhHhhcccccEEEEeccCchhHHHHHHHHHcCC
Confidence            2  356799999999975578999999999999999986443333333332 3566777777666667899999999999


Q ss_pred             CCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 018075          324 IDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF  359 (361)
Q Consensus       324 ~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi  359 (361)
                      +++.+.+.+.|++  +++++|++.+++++..+|+++
T Consensus       317 l~~~~~~~~~~~l--~~~~~a~~~~~~~~~~~kvv~  350 (350)
T cd08256         317 LPTDGIVTHQFPL--EDFEEAFELMARGDDSIKVVL  350 (350)
T ss_pred             CChhHheEEEeEH--HHHHHHHHHHHhCCCceEEeC
Confidence            9654456788898  999999999999988889875

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=100.00  E-value=5.6e-43  Score=324.25  Aligned_cols=338  Identities=27%  Similarity=0.369  Sum_probs=275.8

Q ss_pred             ceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCC
Q 018075           15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEV   94 (361)
Q Consensus        15 ~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   94 (361)
                      |+++++.+++.+++++++.|.+.++||+|||.++++|++|++...+....   ...|.++|||++|+|+++|++++++++
T Consensus         1 mka~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~---~~~~~~~G~e~~G~V~~vG~~v~~~~~   77 (351)
T cd08285           1 MKAFAMLGIGKVGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPG---ERHGMILGHEAVGVVEEVGSEVKDFKP   77 (351)
T ss_pred             CceEEEccCCccEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCC---CCCCcccCcceEEEEEEecCCcCccCC
Confidence            46777878888999999999999999999999999999999877654321   356889999999999999999999999


Q ss_pred             CCEEEecCCcCCCCCccccCCCCCCCCCccc--cCCCCCCCceeEEEEecCC--ceEECCCCCCccccccc-chhHHHHH
Q 018075           95 GDRVALEPGISCGHCSLCKAGSYNLCPEMRF--FGSPPTNGSLAHKVVHPAK--LCYKLPDNVSLEEGAMC-EPLSVGVH  169 (361)
Q Consensus        95 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~~~--~~~~vP~~~~~~~aa~~-~~~~~a~~  169 (361)
                      ||+|++.+..+|+.|..|..|++..|+....  ..+....|+|+||+.++.+  .++++|+++++++++.+ .++.+|++
T Consensus        78 Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~  157 (351)
T cd08285          78 GDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGFH  157 (351)
T ss_pred             CCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhHHH
Confidence            9999998888999999999999999987521  1112347999999999974  89999999999998866 57888999


Q ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcC
Q 018075          170 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       170 ~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      +++..++++|++|||+|+|++|++++|+|+.+|+..++++++++++.++++++|++.++++..  .++.+.+.++.  .+
T Consensus       158 ~~~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--~~~~~~i~~~~--~~  233 (351)
T cd08285         158 GAELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKN--GDVVEQILKLT--GG  233 (351)
T ss_pred             HHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCC--CCHHHHHHHHh--CC
Confidence            887788999999999999999999999999999977899999999999999999988877533  35555554443  35


Q ss_pred             CCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceech--H--hhhcCcEEEEeecC--CCcHHHHHHHHHcCC
Q 018075          250 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT--P--AAAREVDVIGIFRY--RSTWPLCIEFLRSGK  323 (361)
Q Consensus       250 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~--~--~~~~~~~i~~~~~~--~~~~~~~~~~l~~g~  323 (361)
                      .++|++||++|++..+..++++|+++|+++.+|.......+...  .  ......++.+....  ++.++++++++++|+
T Consensus       234 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~  313 (351)
T cd08285         234 KGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPGGRLRMERLASLIEYGR  313 (351)
T ss_pred             CCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEEeecCCccccHHHHHHHHHcCC
Confidence            68999999999877889999999999999999865532222221  1  22445566655432  578999999999999


Q ss_pred             CCCCC-ceEEEecCChhhHHHHHHHHhcCCC-ceEEEEeC
Q 018075          324 IDVKP-LITHRFGFTQKEIEDAFEISAQGGN-AIKVMFNL  361 (361)
Q Consensus       324 ~~~~~-~~~~~~~l~~~~~~~a~~~l~~~~~-~gkvvi~~  361 (361)
                      +.+.. ...+.+++  +++++|++.+.+++. ..|+++++
T Consensus       314 i~~~~~~~~~~~~l--~~~~~a~~~~~~~~~~~~k~~~~~  351 (351)
T cd08285         314 VDPSKLLTHHFFGF--DDIEEALMLMKDKPDDLIKPVIIF  351 (351)
T ss_pred             CChhhceeccccCH--HHHHHHHHHHhcccCCeEEEEEeC
Confidence            96533 34445788  999999999999864 78999875

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=100.00  E-value=1.5e-42  Score=323.23  Aligned_cols=337  Identities=26%  Similarity=0.423  Sum_probs=273.8

Q ss_pred             ceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCC
Q 018075           15 NMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE   93 (361)
Q Consensus        15 ~~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   93 (361)
                      ++++|+..+ +.++++++|.|++.++||+|||.++|+|++|++...|..    ...+|+++|||++|+|+++|++++.++
T Consensus         8 ~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~----~~~~p~v~G~e~~G~V~~vG~~v~~~~   83 (373)
T cd08299           8 CKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKL----VTPFPVILGHEAAGIVESVGEGVTTVK   83 (373)
T ss_pred             eEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCC----CCCCCccccccceEEEEEeCCCCccCC
Confidence            677777754 679999999999999999999999999999999887653    235688999999999999999999999


Q ss_pred             CCCEEEecCCcCCCCCccccCCCCCCCCCccccCC--------------------CCCCCceeEEEEecCCceEECCCCC
Q 018075           94 VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS--------------------PPTNGSLAHKVVHPAKLCYKLPDNV  153 (361)
Q Consensus        94 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~g~~~~~~~~~~~~~~~vP~~~  153 (361)
                      +||+|++.+..+||+|.+|+.+++..|+.....+.                    ....|+|+||++++.+.++++|+++
T Consensus        84 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l  163 (373)
T cd08299          84 PGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAA  163 (373)
T ss_pred             CCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCCCC
Confidence            99999998888999999999999999997654320                    0035899999999999999999999


Q ss_pred             Ccccccccc-hhHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecC
Q 018075          154 SLEEGAMCE-PLSVGVHACR-RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS  231 (361)
Q Consensus       154 ~~~~aa~~~-~~~~a~~~l~-~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  231 (361)
                      ++++++.+. ++.+||+++. .+++++|++|||+|+|++|++++++|+..|+..|+++++++++.+.++++|++.+++..
T Consensus       164 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~~  243 (373)
T cd08299         164 PLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINPQ  243 (373)
T ss_pred             ChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEeccc
Confidence            999988665 7888998864 58899999999999999999999999999996688888999999999999998877754


Q ss_pred             CCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhh-cCCCEEEEEccCCCCcceechH-hhhcCcEEEEeecC-
Q 018075          232 TDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNAT-RPGGKVCLIGLAKTEMTVALTP-AAAREVDVIGIFRY-  308 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l-~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~i~~~~~~-  308 (361)
                      +...++.+.+.++.   ++++|++||++|++..+..++..+ +++|+++.+|.......+.... .+.++.++.+++.. 
T Consensus       244 ~~~~~~~~~v~~~~---~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~  320 (373)
T cd08299         244 DYKKPIQEVLTEMT---DGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPMLLLTGRTWKGAVFGG  320 (373)
T ss_pred             ccchhHHHHHHHHh---CCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHHHHhcCCeEEEEEecC
Confidence            32223444444443   358999999999766777766655 6799999999654322333333 23466788877653 


Q ss_pred             ---CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          309 ---RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       309 ---~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                         ...+.++++.+.++.+++.+.+++.|++  +++++|++.+++++. .|+++++
T Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~e~~~a~~~~~~~~~-~k~~~~~  373 (373)
T cd08299         321 WKSKDSVPKLVADYMAKKFNLDPLITHTLPF--EKINEGFDLLRSGKS-IRTVLTF  373 (373)
T ss_pred             CccHHHHHHHHHHHHcCCCCchhheeeeecH--HHHHHHHHHHhCCCc-ceEEEeC
Confidence               2567778888888877667778899999  999999999987754 5888764

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=100.00  E-value=1e-42  Score=321.46  Aligned_cols=337  Identities=53%  Similarity=0.956  Sum_probs=280.6

Q ss_pred             EEEeeCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCE
Q 018075           18 AWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDR   97 (361)
Q Consensus        18 ~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~   97 (361)
                      .++.+++.+++++.+.|++.++||+|||.++++|+.|++...+...+......|.++|+|++|+|+++|+++++|++||+
T Consensus         2 ~~~~~~~~~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~   81 (343)
T cd05285           2 AVLHGPGDLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVGDR   81 (343)
T ss_pred             ceEecCCceeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCCCE
Confidence            57788899999999999999999999999999999998865432222222345778999999999999999999999999


Q ss_pred             EEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHHHHHHHHhcCCC
Q 018075           98 VALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVG  177 (361)
Q Consensus        98 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~~~~~~  177 (361)
                      |++.+..+|+.|.+|..|+..+|+...+++.....|+|++|++++++.++++|+++++++|+.+.++.+|+++++.++++
T Consensus        82 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~a~~~~~~~~~~  161 (343)
T cd05285          82 VAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALVEPLSVGVHACRRAGVR  161 (343)
T ss_pred             EEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhhhHHHHHHHHHHhcCCC
Confidence            99988889999999999999999987554433457999999999999999999999999998767888899888778999


Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccch---hHHHHHHHhhcCCCccE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDV---DTDVGKIQNAMGSGIDV  254 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~d~  254 (361)
                      +|+++||.|+|++|++++|+|+.+|++.++++++++++.++++++|++.++++..  .++   .+.+.+.  ..+.++|+
T Consensus       162 ~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~--~~~~~~~~~~~~~--~~~~~~d~  237 (343)
T cd05285         162 PGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT--EDTPESAEKIAEL--LGGKGPDV  237 (343)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEecccc--ccchhHHHHHHHH--hCCCCCCE
Confidence            9999999988999999999999999965888888899999999999998877543  232   3344333  23567999


Q ss_pred             EEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceEEEe
Q 018075          255 SFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRF  334 (361)
Q Consensus       255 vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~  334 (361)
                      +|||+|+...++..+++|+++|+++.+|.......++...+.++++++.++....+.++.++++++++.+.+.+...+.|
T Consensus       238 vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~  317 (343)
T cd05285         238 VIECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPLSAASLREIDIRGVFRYANTYPTAIELLASGKVDVKPLITHRF  317 (343)
T ss_pred             EEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHhhCCcEEEEeccChHHHHHHHHHHHcCCCCchHhEEEEE
Confidence            99999976688999999999999999986554334444567788888888776667889999999999875445567888


Q ss_pred             cCChhhHHHHHHHHhcCC-CceEEEEe
Q 018075          335 GFTQKEIEDAFEISAQGG-NAIKVMFN  360 (361)
Q Consensus       335 ~l~~~~~~~a~~~l~~~~-~~gkvvi~  360 (361)
                      ++  +++.+|++.+.+++ ..+|++|.
T Consensus       318 ~l--~~~~~a~~~~~~~~~~~~k~~~~  342 (343)
T cd05285         318 PL--EDAVEAFETAAKGKKGVIKVVIE  342 (343)
T ss_pred             eH--HHHHHHHHHHHcCCCCeeEEEEe
Confidence            88  99999999999884 45899873

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.7e-42  Score=318.63  Aligned_cols=329  Identities=23%  Similarity=0.383  Sum_probs=277.8

Q ss_pred             ceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCC
Q 018075           15 NMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE   93 (361)
Q Consensus        15 ~~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   93 (361)
                      |+++++.++ +.++++++|.|++.++||+|||.++++|++|+....|....   ...|.++|||++|+|+++|++++.++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~p~~~g~e~~G~v~~vG~~v~~~~   77 (333)
T cd08296           1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPG---LSYPRVPGHEVVGRIDAVGEGVSRWK   77 (333)
T ss_pred             CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCC---CCCCcccCcceeEEEEEECCCCccCC
Confidence            467777777 68999999999999999999999999999999888764321   25588999999999999999999999


Q ss_pred             CCCEEEecCC-cCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHH
Q 018075           94 VGDRVALEPG-ISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHAC  171 (361)
Q Consensus        94 ~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l  171 (361)
                      +||+|++.+. ..|+.|.+|+.|++..|+++...+. ...|+|++|+.++.+.++++|+++++++++.+ ..+.+||+++
T Consensus        78 ~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~-~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~  156 (333)
T cd08296          78 VGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGV-TRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNAL  156 (333)
T ss_pred             CCCEEEeccccCCCCCChhhhCcCcccCCCCCccCc-ccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHH
Confidence            9999998653 5799999999999999998765443 23699999999999999999999999888855 4678889888


Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCC
Q 018075          172 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       172 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (361)
                      +...++++++|||+|+|++|++++++|+.+|+ .+++++.++++.+.++++|++.++++..  .++...+.++     .+
T Consensus       157 ~~~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~--~~~~~~~~~~-----~~  228 (333)
T cd08296         157 RNSGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTSK--EDVAEALQEL-----GG  228 (333)
T ss_pred             HhcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCCC--ccHHHHHHhc-----CC
Confidence            77789999999999999999999999999999 5888888999999999999988776433  3454444332     37


Q ss_pred             ccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCCCce
Q 018075          252 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLI  330 (361)
Q Consensus       252 ~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~  330 (361)
                      +|++||+.|.+..+...+++++++|+++.+|......+++...++.+++++.+.... ..++..++++++++.+  ++.+
T Consensus       229 ~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l--~~~v  306 (333)
T cd08296         229 AKLILATAPNAKAISALVGGLAPRGKLLILGAAGEPVAVSPLQLIMGRKSIHGWPSGTALDSEDTLKFSALHGV--RPMV  306 (333)
T ss_pred             CCEEEECCCchHHHHHHHHHcccCCEEEEEecCCCCCCcCHHHHhhcccEEEEeCcCCHHHHHHHHHHHHhCCC--CceE
Confidence            999999987666899999999999999999976544455555677899999998754 5678889999999888  4444


Q ss_pred             EEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075          331 THRFGFTQKEIEDAFEISAQGGNAIKVMFN  360 (361)
Q Consensus       331 ~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~  360 (361)
                       +.|++  +++.+|++.+.+++..||+|++
T Consensus       307 -~~~~~--~~~~~a~~~~~~~~~~gk~v~~  333 (333)
T cd08296         307 -ETFPL--EKANEAYDRMMSGKARFRVVLT  333 (333)
T ss_pred             -EEEEH--HHHHHHHHHHHCCCCceeEEeC
Confidence             57888  9999999999999999999875

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=100.00  E-value=4.2e-42  Score=317.01  Aligned_cols=334  Identities=36%  Similarity=0.674  Sum_probs=275.1

Q ss_pred             EEeeCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEE
Q 018075           19 WLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRV   98 (361)
Q Consensus        19 ~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V   98 (361)
                      |+++++.+.+++.++|+++++||+|||.++++|++|+...++...+.....+|.++|+|++|+|+++|+++++|++||+|
T Consensus         2 ~~~~~~~~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V   81 (339)
T cd08232           2 VIHAAGDLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRV   81 (339)
T ss_pred             eeccCCceEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCEE
Confidence            56788999999999999999999999999999999987653211111223467899999999999999999999999999


Q ss_pred             EecCCcCCCCCccccCCCCCCCCCccccCCC----CCCCceeEEEEecCCceEECCCCCCcccccccchhHHHHHHHHhc
Q 018075           99 ALEPGISCGHCSLCKAGSYNLCPEMRFFGSP----PTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRA  174 (361)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~~~  174 (361)
                      ++.+..+|++|.+|..|+.+.|+++.+++..    ...|+|++|+.++.+.++++|+++++++|+.+.++.+||+++...
T Consensus        82 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~~~~~~~a~~~l~~~  161 (339)
T cd08232          82 AVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAALAEPLAVALHAVNRA  161 (339)
T ss_pred             EEccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhhcchHHHHHHHHHhc
Confidence            9998889999999999999999987655421    247999999999999999999999999988767888899998764


Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccE
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV  254 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  254 (361)
                      ...++++|||.|+|.+|++++|+|+.+|++.++++++++++.++++++|++.++++..  .++    .++.. ...++|+
T Consensus       162 ~~~~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~--~~~----~~~~~-~~~~vd~  234 (339)
T cd08232         162 GDLAGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLAR--DPL----AAYAA-DKGDFDV  234 (339)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCc--hhh----hhhhc-cCCCccE
Confidence            4349999999988999999999999999966888888888889999999988776532  221    12211 2356999


Q ss_pred             EEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceEEEe
Q 018075          255 SFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRF  334 (361)
Q Consensus       255 vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~  334 (361)
                      +||+.+....++.++++|+++|+++.+|............+..+++++.+.....+.++.+++++++|.+++.+.+.+.|
T Consensus       235 vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  314 (339)
T cd08232         235 VFEASGAPAALASALRVVRPGGTVVQVGMLGGPVPLPLNALVAKELDLRGSFRFDDEFAEAVRLLAAGRIDVRPLITAVF  314 (339)
T ss_pred             EEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccCcHHHHhhcceEEEEEecCHHHHHHHHHHHHcCCCCchhheeEEe
Confidence            99999976588999999999999999985443223333445667788888766667889999999999986666677888


Q ss_pred             cCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          335 GFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       335 ~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      ++  ++++++++.+.++...||+|+++
T Consensus       315 ~~--~~~~~a~~~~~~~~~~gkvvv~~  339 (339)
T cd08232         315 PL--EEAAEAFALAADRTRSVKVQLSF  339 (339)
T ss_pred             cH--HHHHHHHHHHHhCCCceeEEEeC
Confidence            88  99999999999888899999874

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=100.00  E-value=1.7e-41  Score=315.67  Aligned_cols=333  Identities=28%  Similarity=0.465  Sum_probs=273.6

Q ss_pred             eEEEEee-CCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCC
Q 018075           16 MAAWLLG-IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEV   94 (361)
Q Consensus        16 ~~~~~~~-~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   94 (361)
                      +++++.+ .+.+.+++++.|.+++++|+|++.++++|++|++...+...    ...|.++|||++|+|+++|++++.+++
T Consensus         2 ~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~----~~~~~i~g~e~~G~V~~vG~~v~~~~~   77 (365)
T cd05279           2 KAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP----TPLPVILGHEGAGIVESIGPGVTTLKP   77 (365)
T ss_pred             ceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC----CCCCcccccceeEEEEEeCCCcccCCC
Confidence            4566664 46899999999999999999999999999999988776432    356789999999999999999999999


Q ss_pred             CCEEEecCCcCCCCCccccCCCCCCCCCccccCCCC--------------------CCCceeEEEEecCCceEECCCCCC
Q 018075           95 GDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPP--------------------TNGSLAHKVVHPAKLCYKLPDNVS  154 (361)
Q Consensus        95 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~g~~~~~~~~~~~~~~~vP~~~~  154 (361)
                      ||+|++.+..+|+.|.+|+.|.+.+|+...+++...                    ..|+|++|+.++++.++++|++++
T Consensus        78 Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~  157 (365)
T cd05279          78 GDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAP  157 (365)
T ss_pred             CCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCCCC
Confidence            999999888899999999999999998866543110                    247999999999999999999999


Q ss_pred             cccccccc-hhHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCC
Q 018075          155 LEEGAMCE-PLSVGVHACR-RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST  232 (361)
Q Consensus       155 ~~~aa~~~-~~~~a~~~l~-~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~  232 (361)
                      +++|+.+. ++.+||+++. .+++++|++|||+|+|++|++++++|+.+|+..++++++++++.+.++++|++.+++...
T Consensus       158 ~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~  237 (365)
T cd05279         158 LEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRD  237 (365)
T ss_pred             HHHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeeccccc
Confidence            99988665 7888998875 488999999999999999999999999999977888888999999999999988776433


Q ss_pred             CccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhc-CCCEEEEEccCC--CCcceechHhhhcCcEEEEeecC-
Q 018075          233 DIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATR-PGGKVCLIGLAK--TEMTVALTPAAAREVDVIGIFRY-  308 (361)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~-~~G~~v~~g~~~--~~~~~~~~~~~~~~~~i~~~~~~-  308 (361)
                      ...++.+.+.++.   +.++|++||++|....+..++++++ ++|+++.+|...  ....+....+ .+..++.|.+.. 
T Consensus       238 ~~~~~~~~l~~~~---~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~~  313 (365)
T cd05279         238 QDKPIVEVLTEMT---DGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDL-LTGRTIKGTVFGG  313 (365)
T ss_pred             ccchHHHHHHHHh---CCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHH-hcCCeEEEEeccC
Confidence            1114444444432   4689999999987668999999999 999999998653  2223333344 667778776432 


Q ss_pred             ---CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 018075          309 ---RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF  359 (361)
Q Consensus       309 ---~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi  359 (361)
                         .+.+..++++++++.+++.+..++++++  +++++|++.+++++. .|+++
T Consensus       314 ~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l--~~~~~a~~~~~~~~~-~~~~~  364 (365)
T cd05279         314 WKSKDSVPKLVALYRQKKFPLDELITHVLPF--EEINDGFDLMRSGES-IRTIL  364 (365)
T ss_pred             CchHhHHHHHHHHHHcCCcchhHheeeeecH--HHHHHHHHHHhCCCc-eeeee
Confidence               5678899999999999766678888888  999999999988755 46665

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=100.00  E-value=2.7e-41  Score=316.29  Aligned_cols=338  Identities=32%  Similarity=0.510  Sum_probs=275.4

Q ss_pred             ceEEEEeeCCceEEEEecCCCC-CCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCC
Q 018075           15 NMAAWLLGIKTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE   93 (361)
Q Consensus        15 ~~~~~~~~~~~l~~~~~~~p~~-~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   93 (361)
                      |++.++.+++.++++++|.|+| ++++|+||+.++++|++|+....|....   .++|.++|+|++|+|+++|+++++++
T Consensus         1 m~a~~~~~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~---~~~p~~~G~e~~G~V~~vG~~v~~~~   77 (386)
T cd08283           1 MKALVWHGKGDVRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPG---MKKGDILGHEFMGVVEEVGPEVRNLK   77 (386)
T ss_pred             CeeEEEecCCCceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCC---CCCCccccccceEEEEEeCCCCCCCC
Confidence            3566677888999999999998 5999999999999999999988775422   34688999999999999999999999


Q ss_pred             CCCEEEecCCcCCCCCccccCCCCCCCCCccccC---------------C----CCCCCceeEEEEecCC--ceEECCCC
Q 018075           94 VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFG---------------S----PPTNGSLAHKVVHPAK--LCYKLPDN  152 (361)
Q Consensus        94 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~----~~~~g~~~~~~~~~~~--~~~~vP~~  152 (361)
                      +||+|++.+...||+|.+|+.+.+.+|+++....               .    ....|+|++|++++.+  .++++|++
T Consensus        78 ~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~  157 (386)
T cd08283          78 VGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPDD  157 (386)
T ss_pred             CCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEECCCC
Confidence            9999999888889999999999999999764221               0    0136999999999988  89999999


Q ss_pred             CCccccccc-chhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecC
Q 018075          153 VSLEEGAMC-EPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS  231 (361)
Q Consensus       153 ~~~~~aa~~-~~~~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  231 (361)
                      +++++|+.+ ..+.+||++++.+.+++|++|||+|+|++|++++++|+..|+..+++++.++++.+++++++...++++.
T Consensus       158 ~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~vi~~~  237 (386)
T cd08283         158 LSDEKALFLSDILPTGYHAAELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETINFE  237 (386)
T ss_pred             CCHHHHhhhccchhhhHHHHhhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEEcCC
Confidence            999998865 4788999999668899999999999999999999999999986689999999999999998444555433


Q ss_pred             CCccchhHHHHHHHhhcCCCccEEEEccCCh---------------------HHHHHHHHhhcCCCEEEEEccCCCC-cc
Q 018075          232 TDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD---------------------KTMSTALNATRPGGKVCLIGLAKTE-MT  289 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~---------------------~~~~~~~~~l~~~G~~v~~g~~~~~-~~  289 (361)
                      .. .++.+.+.++.  .+.++|++||++|+.                     ..++.++++++++|+++.+|..... ..
T Consensus       238 ~~-~~~~~~l~~~~--~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~  314 (386)
T cd08283         238 EV-DDVVEALRELT--GGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGGTVNK  314 (386)
T ss_pred             cc-hHHHHHHHHHc--CCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCCCCcCc
Confidence            21 13555554442  345799999999752                     3678899999999999999865432 22


Q ss_pred             eechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCC-CceEEEEe
Q 018075          290 VALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGG-NAIKVMFN  360 (361)
Q Consensus       290 ~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~-~~gkvvi~  360 (361)
                      +.......++.++.+.... .+.++.++++++++++...+.+++.|++  +++++|++.+.+++ ..+|+|++
T Consensus       315 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~l--~~~~~a~~~~~~~~~~~~k~~~~  385 (386)
T cd08283         315 FPIGAAMNKGLTLRMGQTHVQRYLPRLLELIESGELDPSFIITHRLPL--EDAPEAYKIFDKKEDGCIKVVLK  385 (386)
T ss_pred             cCHHHHHhCCcEEEeccCCchHHHHHHHHHHHcCCCChhHceEEEecH--HHHHHHHHHHHhCCCCeEEEEec
Confidence            3333456778888876544 5678899999999999665556788888  99999999998886 56899986

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=100.00  E-value=3.1e-41  Score=311.36  Aligned_cols=333  Identities=29%  Similarity=0.493  Sum_probs=277.6

Q ss_pred             eEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCC
Q 018075           16 MAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEV   94 (361)
Q Consensus        16 ~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   94 (361)
                      +++++.++ +.+++++.+.|++.+++|+|||.++++|++|+....|......+...|.++|+|++|+|+++|+++..+++
T Consensus         2 ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~   81 (340)
T cd05284           2 KAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLKE   81 (340)
T ss_pred             eeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCcC
Confidence            56666666 67999999999999999999999999999999887765432233466889999999999999999999999


Q ss_pred             CCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHHHh
Q 018075           95 GDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRR  173 (361)
Q Consensus        95 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l~~  173 (361)
                      ||+|++.+...|+.|..|+.|...+|++..+++. ...|+|++|+.++.+.++++|+++++++++.+ ..+.+||+++..
T Consensus        82 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l~~  160 (340)
T cd05284          82 GDPVVVHPPWGCGTCRYCRRGEENYCENARFPGI-GTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVKK  160 (340)
T ss_pred             CCEEEEcCCCCCCCChHHhCcCcccCCCCcccCc-cCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHHHHH
Confidence            9999998888999999999999999999888775 46899999999999999999999999888866 478899999865


Q ss_pred             --cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCC
Q 018075          174 --ANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       174 --~~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (361)
                        ..+.++++|||+|+|++|++++++|+.+| . .++++++++++.+.++++|+++++++..  . +...+.++.  .+.
T Consensus       161 ~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~-~~~~i~~~~--~~~  234 (340)
T cd05284         161 ALPYLDPGSTVVVIGVGGLGHIAVQILRALTPA-TVIAVDRSEEALKLAERLGADHVLNASD--D-VVEEVRELT--GGR  234 (340)
T ss_pred             hcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHHHhCCcEEEcCCc--c-HHHHHHHHh--CCC
Confidence              36889999999998889999999999999 6 5777888899999999999988776532  2 545554442  345


Q ss_pred             CccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCCCc
Q 018075          251 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPL  329 (361)
Q Consensus       251 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~  329 (361)
                      ++|+++|++|+....+.++++|+++|+++.+|.... ..+.......+++++.+.... .+.+..+++++++|.+.  + 
T Consensus       235 ~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~--~-  310 (340)
T cd05284         235 GADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH-GRLPTSDLVPTEISVIGSLWGTRAELVEVVALAESGKVK--V-  310 (340)
T ss_pred             CCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC-CccCHHHhhhcceEEEEEecccHHHHHHHHHHHHhCCCC--c-
Confidence            799999999976689999999999999999986553 233333445678888876543 66788999999999984  3 


Q ss_pred             eEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          330 ITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       330 ~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      ..+.|++  +++++|++.+++++..||+++..
T Consensus       311 ~~~~~~~--~~~~~a~~~~~~~~~~gkvv~~~  340 (340)
T cd05284         311 EITKFPL--EDANEALDRLREGRVTGRAVLVP  340 (340)
T ss_pred             ceEEEeH--HHHHHHHHHHHcCCccceEEecC
Confidence            3456888  99999999999998899999863

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=100.00  E-value=3.2e-41  Score=313.78  Aligned_cols=334  Identities=28%  Similarity=0.434  Sum_probs=272.9

Q ss_pred             ccceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCC
Q 018075           13 NQNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS   91 (361)
Q Consensus        13 ~~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   91 (361)
                      ++|+++++.++ +.+++++.+.|++.++||+|||.++|+|++|++...|...    ...|.++|+|++|+|+++|+++.+
T Consensus         1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~----~~~p~v~G~e~~G~V~~vG~~v~~   76 (365)
T cd08278           1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP----TPLPAVLGHEGAGVVEAVGSAVTG   76 (365)
T ss_pred             CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC----CCCCcccccceeEEEEEeCCCccc
Confidence            45677777764 6789999999999999999999999999999998876432    346889999999999999999999


Q ss_pred             CCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCC----------------------CCCCCceeEEEEecCCceEEC
Q 018075           92 LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS----------------------PPTNGSLAHKVVHPAKLCYKL  149 (361)
Q Consensus        92 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~g~~~~~~~~~~~~~~~v  149 (361)
                      +++||+|+..+. .|+.|.+|+.|+.++|++......                      ....|+|++|++++++.++++
T Consensus        77 ~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~i  155 (365)
T cd08278          77 LKPGDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKV  155 (365)
T ss_pred             CCCCCEEEEccc-CCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEEC
Confidence            999999998764 899999999999999987542210                      123689999999999999999


Q ss_pred             CCCCCccccccc-chhHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEE
Q 018075          150 PDNVSLEEGAMC-EPLSVGVHACR-RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET  227 (361)
Q Consensus       150 P~~~~~~~aa~~-~~~~~a~~~l~-~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~  227 (361)
                      |+++++++++.+ ..+.+|+.++. ...+++|++|||+|+|++|++++|+|+.+|++.+++++.++++.++++++|++.+
T Consensus       156 P~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~  235 (365)
T cd08278         156 DKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHV  235 (365)
T ss_pred             CCCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEE
Confidence            999999888755 47788888874 4789999999999999999999999999999879999999999999999999887


Q ss_pred             eecCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCC--CCcceechHhhhcCcEEEEe
Q 018075          228 AKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK--TEMTVALTPAAAREVDVIGI  305 (361)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~~~~~~i~~~  305 (361)
                      +++..  .++.+.+.+..   +.++|++||++|....+..++++++++|+++.+|...  ....++...+..++.++.++
T Consensus       236 i~~~~--~~~~~~v~~~~---~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~  310 (365)
T cd08278         236 INPKE--EDLVAAIREIT---GGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKTIRGV  310 (365)
T ss_pred             ecCCC--cCHHHHHHHHh---CCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCceEEEe
Confidence            76432  35555554432   5689999999997668999999999999999998653  22344445555778888776


Q ss_pred             ecC----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075          306 FRY----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  360 (361)
Q Consensus       306 ~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~  360 (361)
                      ...    .+.++++++++++|.+.+.+.+ ..|++  +++++|++.+.+++. -|+|++
T Consensus       311 ~~~~~~~~~~~~~~~~~l~~g~l~~~~~~-~~~~l--~~~~~a~~~~~~~~~-~k~~~~  365 (365)
T cd08278         311 IEGDSVPQEFIPRLIELYRQGKFPFDKLV-TFYPF--EDINQAIADSESGKV-IKPVLR  365 (365)
T ss_pred             ecCCcChHHHHHHHHHHHHcCCCChHHhe-EEecH--HHHHHHHHHHHCCCc-eEEEEC
Confidence            543    3467889999999998433334 57888  999999999988765 488774

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=100.00  E-value=3e-41  Score=312.35  Aligned_cols=336  Identities=31%  Similarity=0.532  Sum_probs=274.9

Q ss_pred             eEEEEeeCCceEEEEecCCCC-CCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCC
Q 018075           16 MAAWLLGIKTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEV   94 (361)
Q Consensus        16 ~~~~~~~~~~l~~~~~~~p~~-~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   94 (361)
                      +++++.+++.+.+.+.|.|.+ .+++|+|||.++++|++|++...|....   .++|.++|+|++|+|+++|++++++++
T Consensus         2 ka~~~~~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~vG~~v~~~~~   78 (347)
T cd05278           2 KALVYLGPGKIGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPG---AKHGMILGHEFVGEVVEVGSDVKRLKP   78 (347)
T ss_pred             ceEEEecCCceEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCC---CCCCceeccceEEEEEEECCCccccCC
Confidence            566777888899999999999 9999999999999999999887765422   356889999999999999999999999


Q ss_pred             CCEEEecCCcCCCCCccccCCCCCCCCCccccC--CCCCCCceeEEEEecCC--ceEECCCCCCccccccc-chhHHHHH
Q 018075           95 GDRVALEPGISCGHCSLCKAGSYNLCPEMRFFG--SPPTNGSLAHKVVHPAK--LCYKLPDNVSLEEGAMC-EPLSVGVH  169 (361)
Q Consensus        95 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~--~~~~vP~~~~~~~aa~~-~~~~~a~~  169 (361)
                      ||+|++.+..+||.|.+|+.|+...|++..++.  +....|+|++|++++++  .++++|+++++++|+.+ ..+.+||+
T Consensus        79 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~  158 (347)
T cd05278          79 GDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGFH  158 (347)
T ss_pred             CCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhheee
Confidence            999999989999999999999999999866442  22347999999999987  99999999999998866 47899999


Q ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcC
Q 018075          170 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       170 ~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      ++...++++|++|||.|+|++|++++|+|+.+|...++++++++++.++++++|++.++++..  .++.+.+..+.  .+
T Consensus       159 ~~~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~--~~~~~~i~~~~--~~  234 (347)
T cd05278         159 GAELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKN--GDIVEQILELT--GG  234 (347)
T ss_pred             hhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCc--chHHHHHHHHc--CC
Confidence            986688999999999888999999999999999756788888889999999999888776543  34555554432  34


Q ss_pred             CCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcce-echHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCC
Q 018075          250 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTV-ALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVK  327 (361)
Q Consensus       250 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~  327 (361)
                      .++|++||++++...++..+++|+++|+++.+|........ .......++.++.+.... .+.+++++++++++.+.+.
T Consensus       235 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  314 (347)
T cd05278         235 RGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPVRARMPELLDLIEEGKIDPS  314 (347)
T ss_pred             CCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeeccCchhHHHHHHHHHHcCCCChh
Confidence            68999999999755899999999999999999854432211 111223456666654333 4678899999999999654


Q ss_pred             CceEEEecCChhhHHHHHHHHhcCCC-ceEEEEe
Q 018075          328 PLITHRFGFTQKEIEDAFEISAQGGN-AIKVMFN  360 (361)
Q Consensus       328 ~~~~~~~~l~~~~~~~a~~~l~~~~~-~gkvvi~  360 (361)
                      +...+.+++  ++++++++.+..++. .+|+|++
T Consensus       315 ~~~~~~~~~--~~~~~a~~~~~~~~~~~~~~vv~  346 (347)
T cd05278         315 KLITHRFPL--DDILKAYRLFDNKPDGCIKVVIR  346 (347)
T ss_pred             HcEEEEecH--HHHHHHHHHHhcCCCCceEEEec
Confidence            446677888  999999999988876 7899886

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=100.00  E-value=2.4e-41  Score=317.92  Aligned_cols=342  Identities=21%  Similarity=0.243  Sum_probs=277.4

Q ss_pred             CcccceEEEEee-----C-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccc------c-CCCCcccCcc
Q 018075           11 DKNQNMAAWLLG-----I-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANF------I-VKKPMVIGHE   77 (361)
Q Consensus        11 ~~~~~~~~~~~~-----~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~------~-~~~p~~~G~e   77 (361)
                      .|.++++.++..     + +.++++++|.|+++++||+|+|.++++|++|++...+......      . ...+.++|||
T Consensus         9 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e   88 (393)
T cd08246           9 VPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSD   88 (393)
T ss_pred             CchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccc
Confidence            456677776652     2 3589999999999999999999999999999987765411100      0 1123589999


Q ss_pred             eeEEEEEeCCCCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccc
Q 018075           78 CAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEE  157 (361)
Q Consensus        78 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~  157 (361)
                      ++|+|+++|++++.+++||+|++.+...|+.|..|+.+.+++|+...+++.....|+|++|++++...++++|+++++++
T Consensus        89 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~~~  168 (393)
T cd08246          89 ASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEE  168 (393)
T ss_pred             eEEEEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCHHH
Confidence            99999999999999999999999988899999999999999999888887665679999999999999999999999998


Q ss_pred             cccc-chhHHHHHHHHh---cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCC
Q 018075          158 GAMC-EPLSVGVHACRR---ANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST  232 (361)
Q Consensus       158 aa~~-~~~~~a~~~l~~---~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~  232 (361)
                      ++.+ .++.+||+++..   +++++|++|||+|+ |++|++++++|+.+|++ +++++.++++.+.++++|++.+++...
T Consensus       169 aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~-vv~~~~s~~~~~~~~~~G~~~~i~~~~  247 (393)
T cd08246         169 AAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGAN-PVAVVSSEEKAEYCRALGAEGVINRRD  247 (393)
T ss_pred             HhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCe-EEEEeCCHHHHHHHHHcCCCEEEcccc
Confidence            8754 588999998753   67899999999995 99999999999999995 667788899999999999988877532


Q ss_pred             Cc--------------------cchhHHHHHHHhhcCC-CccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC-Ccce
Q 018075          233 DI--------------------EDVDTDVGKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTV  290 (361)
Q Consensus       233 ~~--------------------~~~~~~~~~~~~~~~~-~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~  290 (361)
                      .+                    ..+.+.+.++.  .+. ++|++||++|+. .+...+++++++|+++.+|.... ...+
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~--~~~~g~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~  324 (393)
T cd08246         248 FDHWGVLPDVNSEAYTAWTKEARRFGKAIWDIL--GGREDPDIVFEHPGRA-TFPTSVFVCDRGGMVVICAGTTGYNHTY  324 (393)
T ss_pred             cccccccccccchhhhhhhhccchHHHHHHHHh--CCCCCCeEEEECCchH-hHHHHHHHhccCCEEEEEcccCCCCCCC
Confidence            11                    01233333332  344 799999999974 88999999999999999986443 2234


Q ss_pred             echHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcC-CCceEEEEe
Q 018075          291 ALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG-GNAIKVMFN  360 (361)
Q Consensus       291 ~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~-~~~gkvvi~  360 (361)
                      ....+..++.++.+.+.. .+++.+++++++++.+  .+.++++|++  +++++|++.+.++ +..||+++-
T Consensus       325 ~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~l--~~~~~a~~~~~~~~~~~gkvvv~  392 (393)
T cd08246         325 DNRYLWMRQKRIQGSHFANDREAAEANRLVMKGRI--DPCLSKVFSL--DETPDAHQLMHRNQHHVGNMAVL  392 (393)
T ss_pred             cHHHHhhheeEEEecccCcHHHHHHHHHHHHcCCc--eeeeeEEEeH--HHHHHHHHHHHhCccccceEEEe
Confidence            455667788888887655 4578899999999988  4456788888  9999999999999 788999874

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=6.4e-41  Score=309.38  Aligned_cols=328  Identities=29%  Similarity=0.501  Sum_probs=263.8

Q ss_pred             eEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhccccc--------ccccCCCCcccCcceeEEEEEeCC
Q 018075           16 MAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRC--------ANFIVKKPMVIGHECAGIIEEVGS   87 (361)
Q Consensus        16 ~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~--------~~~~~~~p~~~G~e~~G~V~~vG~   87 (361)
                      +++++.++ .+++++++.|++++++|+|+|.++++|+.|++...|...        .......|.++|+|++|+|+++|+
T Consensus         2 ~a~~~~~~-~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~   80 (341)
T cd08262           2 RAAVFRDG-PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDYGP   80 (341)
T ss_pred             ceEEEeCC-ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEeCC
Confidence            45555555 899999999999999999999999999999988776211        001234578999999999999999


Q ss_pred             CCCC-CCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHH
Q 018075           88 EVKS-LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSV  166 (361)
Q Consensus        88 ~v~~-~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~  166 (361)
                      ++++ |++||+|++.+..+|+.|..|..|..           ....|+|+||+.++.+.++++|+++++++++.+.++++
T Consensus        81 ~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~-----------~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~~~~~~~~  149 (341)
T cd08262          81 GTERKLKVGTRVTSLPLLLCGQGASCGIGLS-----------PEAPGGYAEYMLLSEALLLRVPDGLSMEDAALTEPLAV  149 (341)
T ss_pred             CCcCCCCCCCEEEecCCcCCCCChhhhCCCC-----------cCCCCceeeeEEechHHeEECCCCCCHHHhhhhhhHHH
Confidence            9987 99999999999999999998844321           12479999999999999999999999998886668888


Q ss_pred             HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCcc--chhHHHHHH
Q 018075          167 GVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIE--DVDTDVGKI  244 (361)
Q Consensus       167 a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~--~~~~~~~~~  244 (361)
                      ||+++..+++++|++|||+|+|++|++++|+|+.+|++.++++++++++.++++++|++.++++.....  .+. .+.+ 
T Consensus       150 a~~~~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~-~~~~-  227 (341)
T cd08262         150 GLHAVRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWA-AELA-  227 (341)
T ss_pred             HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHH-HHHH-
Confidence            998877788999999999999999999999999999977888888999999999999988777543211  111 1111 


Q ss_pred             HhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCC
Q 018075          245 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGK  323 (361)
Q Consensus       245 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~  323 (361)
                       ...+.++|++||++|+...+...+++++++|+++.+|...............++.++.+.... .+.++++++++++|.
T Consensus       228 -~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~  306 (341)
T cd08262         228 -RAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESDNIEPALAIRKELTLQFSLGYTPEEFADALDALAEGK  306 (341)
T ss_pred             -HhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCCccCHHHHhhcceEEEEEecccHHHHHHHHHHHHcCC
Confidence             223567999999999755788899999999999999865432222222234577777766544 457889999999999


Q ss_pred             CCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075          324 IDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  360 (361)
Q Consensus       324 ~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~  360 (361)
                      +.+.+.+.+.+++  ++++++++.+.+++..+|+|++
T Consensus       307 i~~~~~i~~~~~l--~~~~~a~~~~~~~~~~~kvvv~  341 (341)
T cd08262         307 VDVAPMVTGTVGL--DGVPDAFEALRDPEHHCKILVD  341 (341)
T ss_pred             CChHHheEEEeeH--HHHHHHHHHHhcCCCceEEEeC
Confidence            9665566788888  9999999999999999999974

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=100.00  E-value=7.6e-41  Score=308.84  Aligned_cols=336  Identities=33%  Similarity=0.589  Sum_probs=273.0

Q ss_pred             eEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCC
Q 018075           16 MAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEV   94 (361)
Q Consensus        16 ~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   94 (361)
                      ++.++.++ +.+++++.|.|.|+++||+||+.++++|++|+.+..+..........|+++|+|++|+|+++|++++.+++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~   81 (341)
T PRK05396          2 KALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFKV   81 (341)
T ss_pred             ceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCCC
Confidence            45555554 57999999999999999999999999999999876553211112346789999999999999999999999


Q ss_pred             CCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHHHHHHHHhc
Q 018075           95 GDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRA  174 (361)
Q Consensus        95 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~~~  174 (361)
                      ||+|++.+..+|+.|.+|..+.+++|++..+.+ ...+|+|++|+.++.+.++++|+++++++++.+.++.++++++.. 
T Consensus        82 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~~~~~~~~~~~~~-  159 (341)
T PRK05396         82 GDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVG-VNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIFDPFGNAVHTALS-  159 (341)
T ss_pred             CCEEEECCCCCCCCChhhhCcChhhCCCcceee-ecCCCcceeeEEechHHeEECcCCCCHHHhHhhhHHHHHHHHHHc-
Confidence            999999988899999999999999999765443 235799999999999999999999999888866677777666543 


Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccE
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV  254 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  254 (361)
                      ...+|++|+|.|+|++|++++|+|+..|++.++++++++++.++++++|++.++++..  .++.+.+.++.  .+.++|+
T Consensus       160 ~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~--~~~~~~~~~~~--~~~~~d~  235 (341)
T PRK05396        160 FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAK--EDLRDVMAELG--MTEGFDV  235 (341)
T ss_pred             CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc--ccHHHHHHHhc--CCCCCCE
Confidence            3468999999989999999999999999966778888899999999999988876543  34555554442  3568999


Q ss_pred             EEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC--CCcHHHHHHHHHcCCCCCCCceEE
Q 018075          255 SFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY--RSTWPLCIEFLRSGKIDVKPLITH  332 (361)
Q Consensus       255 vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~l~~g~~~~~~~~~~  332 (361)
                      +|||.|....++.++++|+++|+++.+|.......+....+.+++.++.++...  .+.+..++++++++ +...+.+.+
T Consensus       236 v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  314 (341)
T PRK05396        236 GLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMAIDWNKVIFKGLTIKGIYGREMFETWYKMSALLQSG-LDLSPIITH  314 (341)
T ss_pred             EEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCcccHHHHhhcceEEEEEEccCccchHHHHHHHHHcC-CChhHheEE
Confidence            999998777899999999999999999876544444456677788888876532  34566788999998 433555778


Q ss_pred             EecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          333 RFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       333 ~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      .+++  +++++|++.+.++. .||++++.
T Consensus       315 ~~~l--~~~~~a~~~~~~~~-~gk~vv~~  340 (341)
T PRK05396        315 RFPI--DDFQKGFEAMRSGQ-SGKVILDW  340 (341)
T ss_pred             EEeH--HHHHHHHHHHhcCC-CceEEEec
Confidence            8888  99999999998886 79999863

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=7.6e-41  Score=306.06  Aligned_cols=317  Identities=30%  Similarity=0.501  Sum_probs=267.6

Q ss_pred             eEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 018075           16 MAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVG   95 (361)
Q Consensus        16 ~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G   95 (361)
                      +++++.+++.++++++|.|+++++||+|||.++++|++|+....|..      ..|.++|+|++|+|+++|++   +++|
T Consensus         2 ~a~~~~~~~~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~------~~~~~~G~e~~G~Vv~~G~~---~~~G   72 (319)
T cd08242           2 KALVLDGGLDLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYY------PFPGVPGHEFVGIVEEGPEA---ELVG   72 (319)
T ss_pred             eeEEEeCCCcEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCC------CCCCccCceEEEEEEEeCCC---CCCC
Confidence            56677777889999999999999999999999999999998877643      35789999999999999998   6899


Q ss_pred             CEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHHHHHHHHhcC
Q 018075           96 DRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRAN  175 (361)
Q Consensus        96 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~~~~  175 (361)
                      |||...+...|+.|.+|..|.+.+|+.....+....+|+|++|++++.+.++++|+++++++++.+.++.+++..++..+
T Consensus        73 ~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~~~~~~~~~~  152 (319)
T cd08242          73 KRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFAEPLAAALEILEQVP  152 (319)
T ss_pred             CeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhhhHHHHHHHHHHhcC
Confidence            99999888889999999999999999866554323479999999999999999999999988886556667777777788


Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      +++|++|||+|+|.+|++++|+|+.+|++ +++++.++++.+.++++|++...++...             ..+.++|++
T Consensus       153 ~~~g~~vlV~g~g~vg~~~~q~a~~~G~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~~-------------~~~~~~d~v  218 (319)
T cd08242         153 ITPGDKVAVLGDGKLGLLIAQVLALTGPD-VVLVGRHSEKLALARRLGVETVLPDEAE-------------SEGGGFDVV  218 (319)
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCe-EEEEcCCHHHHHHHHHcCCcEEeCcccc-------------ccCCCCCEE
Confidence            99999999999999999999999999995 7888888999999999999876654210             135689999


Q ss_pred             EEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceEEEec
Q 018075          256 FDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFG  335 (361)
Q Consensus       256 ld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~  335 (361)
                      ||++|+...+...+++|+++|+++..+.......+....+..++.++.+....  .+++++++++++++++.+.+.+.|+
T Consensus       219 id~~g~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~  296 (319)
T cd08242         219 VEATGSPSGLELALRLVRPRGTVVLKSTYAGPASFDLTKAVVNEITLVGSRCG--PFAPALRLLRKGLVDVDPLITAVYP  296 (319)
T ss_pred             EECCCChHHHHHHHHHhhcCCEEEEEcccCCCCccCHHHheecceEEEEEecc--cHHHHHHHHHcCCCChhhceEEEEe
Confidence            99999866889999999999999987754444344455566788888876533  3889999999999976666889999


Q ss_pred             CChhhHHHHHHHHhcCCCceEEEEe
Q 018075          336 FTQKEIEDAFEISAQGGNAIKVMFN  360 (361)
Q Consensus       336 l~~~~~~~a~~~l~~~~~~gkvvi~  360 (361)
                      +  +++++|++.+.++. .+|+|++
T Consensus       297 l--~~~~~a~~~~~~~~-~~k~vi~  318 (319)
T cd08242         297 L--EEALEAFERAAEPG-ALKVLLR  318 (319)
T ss_pred             H--HHHHHHHHHHhcCC-ceEEEeC
Confidence            9  99999999998775 5899886

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=100.00  E-value=1e-40  Score=308.39  Aligned_cols=333  Identities=31%  Similarity=0.536  Sum_probs=273.5

Q ss_pred             eEEEEeeCCceEEEEecCCCCC-CCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCC
Q 018075           16 MAAWLLGIKTLKIQPYHLPTLG-PQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEV   94 (361)
Q Consensus        16 ~~~~~~~~~~l~~~~~~~p~~~-~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   94 (361)
                      ++.++.+++.++++++++|+|. ++||+|+|.++++|+.|+....|...    ...|.++|+|++|+|+++|++++.+++
T Consensus         2 ~a~~~~~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~vG~~v~~~~~   77 (344)
T cd08284           2 KAVVFKGPGDVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP----STPGFVLGHEFVGEVVEVGPEVRTLKV   77 (344)
T ss_pred             eeEEEecCCCceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC----CCCCcccccceEEEEEeeCCCccccCC
Confidence            4566667788999999999985 99999999999999999987766432    245789999999999999999999999


Q ss_pred             CCEEEecCCcCCCCCccccCCCCCCCCCccccC---CCCCCCceeEEEEecCC--ceEECCCCCCccccccc-chhHHHH
Q 018075           95 GDRVALEPGISCGHCSLCKAGSYNLCPEMRFFG---SPPTNGSLAHKVVHPAK--LCYKLPDNVSLEEGAMC-EPLSVGV  168 (361)
Q Consensus        95 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~g~~~~~~~~~~~--~~~~vP~~~~~~~aa~~-~~~~~a~  168 (361)
                      ||+|++.+..+|+.|.+|+.++...|++...++   ....+|+|++|+.++++  .++++|+++++++|+.+ ..+.+||
T Consensus        78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~ta~  157 (344)
T cd08284          78 GDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTGY  157 (344)
T ss_pred             CCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchHHHH
Confidence            999999888899999999999999999876652   23347999999999965  99999999999888855 5889999


Q ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhc
Q 018075          169 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       169 ~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      ++++..++++|++|||+|+|++|++++++|+.+|+..++++++++++.++++++|+.. ++.  ...++...+.++.  .
T Consensus       158 ~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~-~~~--~~~~~~~~l~~~~--~  232 (344)
T cd08284         158 FGAKRAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAEP-INF--EDAEPVERVREAT--E  232 (344)
T ss_pred             hhhHhcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCeE-Eec--CCcCHHHHHHHHh--C
Confidence            9997788899999999999999999999999999756788888889999999999753 332  2234555554443  3


Q ss_pred             CCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC-CcceechHhhhcCcEEEEeec-CCCcHHHHHHHHHcCCCCC
Q 018075          249 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFR-YRSTWPLCIEFLRSGKIDV  326 (361)
Q Consensus       249 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~l~~g~~~~  326 (361)
                      +.++|++||++++.......+++++++|+++.+|.... .........+.+++++.+... ..+.+..+++++.++.+.+
T Consensus       233 ~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  312 (344)
T cd08284         233 GRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRCPVRSLFPELLPLLESGRLDL  312 (344)
T ss_pred             CCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEecCCcchhHHHHHHHHHcCCCCh
Confidence            56899999999977689999999999999999986652 222333445567777765432 2678999999999999865


Q ss_pred             CCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075          327 KPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  360 (361)
Q Consensus       327 ~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~  360 (361)
                      .+.+.+.+++  ++++++++.+.+++. +|+|++
T Consensus       313 ~~~~~~~~~~--~~~~~a~~~~~~~~~-~k~Vi~  343 (344)
T cd08284         313 EFLIDHRMPL--EEAPEAYRLFDKRKV-LKVVLD  343 (344)
T ss_pred             HHhEeeeecH--HHHHHHHHHHhcCCc-eEEEec
Confidence            4456678888  999999999998877 999985

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=1.4e-40  Score=307.60  Aligned_cols=338  Identities=31%  Similarity=0.535  Sum_probs=277.1

Q ss_pred             ceEEEEeeCCceEEEEecCCCC-CCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCC
Q 018075           15 NMAAWLLGIKTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE   93 (361)
Q Consensus        15 ~~~~~~~~~~~l~~~~~~~p~~-~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   93 (361)
                      |+++++.+++.+++++.|.|+| .++||+|||.++++|++|+..+.|....   ...|.++|||++|+|+++|+++++++
T Consensus         1 m~a~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~~G~~v~~~~   77 (345)
T cd08286           1 MKALVYHGPGKISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPT---VTPGRILGHEGVGVVEEVGSAVTNFK   77 (345)
T ss_pred             CceEEEecCCceeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCC---CCCCceecccceEEEEEeccCccccC
Confidence            3566677778899999999986 8999999999999999999988775422   24478999999999999999999999


Q ss_pred             CCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCC--ceEECCCCCCccccccc-chhHHHHHH
Q 018075           94 VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAK--LCYKLPDNVSLEEGAMC-EPLSVGVHA  170 (361)
Q Consensus        94 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~vP~~~~~~~aa~~-~~~~~a~~~  170 (361)
                      +||+|++.+...|+.|.+|..++...|....+..+....|+|++|+.++.+  .++++|+++++.+++.+ ..+.+||.+
T Consensus        78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~  157 (345)
T cd08286          78 VGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYEC  157 (345)
T ss_pred             CCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHHHHHH
Confidence            999999988888999999999988888876554333457999999999987  89999999999888855 567888887


Q ss_pred             HH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcC
Q 018075          171 CR-RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       171 l~-~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      +. ..++++|+++||.|+|++|++++|+|+.+|+..++++++++++.++++++|++.++++..  .++...+..+.  .+
T Consensus       158 ~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--~~~~~~i~~~~--~~  233 (345)
T cd08286         158 GVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAK--GDAIEQVLELT--DG  233 (345)
T ss_pred             HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceecccc--ccHHHHHHHHh--CC
Confidence            54 478999999999999999999999999999446888888999999999999988777543  34544444432  35


Q ss_pred             CCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCc
Q 018075          250 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPL  329 (361)
Q Consensus       250 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~~~~~~~  329 (361)
                      .++|++||++|....++.++++|+++|+++.+|.......+....++.++.++.+.....+.+..++++++++.+.+.+.
T Consensus       234 ~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  313 (345)
T cd08286         234 RGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKPVDLHLEKLWIKNITITTGLVDTNTTPMLLKLVSSGKLDPSKL  313 (345)
T ss_pred             CCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCCCCcCHHHHhhcCcEEEeecCchhhHHHHHHHHHcCCCChHHc
Confidence            68999999999777889999999999999999865443344455556678888775443467888999999999866556


Q ss_pred             eEEEecCChhhHHHHHHHHhcCC--CceEEEEeC
Q 018075          330 ITHRFGFTQKEIEDAFEISAQGG--NAIKVMFNL  361 (361)
Q Consensus       330 ~~~~~~l~~~~~~~a~~~l~~~~--~~gkvvi~~  361 (361)
                      +++.+++  ++++++++.+....  ...|++|++
T Consensus       314 ~~~~~~l--~~~~~a~~~~~~~~~~~~~k~~~~~  345 (345)
T cd08286         314 VTHRFKL--SEIEKAYDTFSAAAKHKALKVIIDF  345 (345)
T ss_pred             EEeEeeH--HHHHHHHHHHhccCCCCeeEEEEeC
Confidence            7788998  99999999998764  356888864

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1e-40  Score=312.26  Aligned_cols=331  Identities=30%  Similarity=0.538  Sum_probs=269.3

Q ss_pred             CCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccc----cccCCCCcccCcceeEEEEEeCCCCCCCCCCCEE
Q 018075           23 IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCA----NFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRV   98 (361)
Q Consensus        23 ~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~----~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V   98 (361)
                      ...++++++|.|++++++|+|||.++|+|++|++...+...+    .....+|.++|||++|+|+++|+++++|++||+|
T Consensus        36 ~~~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V  115 (384)
T cd08265          36 YPELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPV  115 (384)
T ss_pred             CCCEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEE
Confidence            347999999999999999999999999999999877532111    1113568899999999999999999999999999


Q ss_pred             EecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCC-------CCcccccccchhHHHHHHH
Q 018075           99 ALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDN-------VSLEEGAMCEPLSVGVHAC  171 (361)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~-------~~~~~aa~~~~~~~a~~~l  171 (361)
                      ++.+..+|+.|..|+.|++.+|+.+...+. ...|+|++|+.++++.++++|++       ++++.|+.+.++.+||+++
T Consensus       116 ~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~-~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~~a~~~~~~~ta~~al  194 (384)
T cd08265         116 TAEEMMWCGMCRACRSGSPNHCKNLKELGF-SADGAFAEYIAVNARYAWEINELREIYSEDKAFEAGALVEPTSVAYNGL  194 (384)
T ss_pred             EECCCCCCCCChhhhCcCcccCCCcceeee-cCCCcceeeEEechHHeEECCccccccccCCCHHHhhhhhHHHHHHHHH
Confidence            999999999999999999999998776553 24799999999999999999986       4556555667889999998


Q ss_pred             H-h-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCC-ccchhHHHHHHHhhc
Q 018075          172 R-R-ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTD-IEDVDTDVGKIQNAM  248 (361)
Q Consensus       172 ~-~-~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~-~~~~~~~~~~~~~~~  248 (361)
                      . . .++++|++|||+|+|++|++++++|+.+|+..++++++++++.++++++|++.++++... ..++...+.++.  .
T Consensus       195 ~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~--~  272 (384)
T cd08265         195 FIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVT--K  272 (384)
T ss_pred             HhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccHHHHHHHhc--C
Confidence            4 3 689999999999999999999999999999778888888899999999999887765432 124545554443  3


Q ss_pred             CCCccEEEEccCCh-HHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC--CCcHHHHHHHHHcCCCC
Q 018075          249 GSGIDVSFDCVGFD-KTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY--RSTWPLCIEFLRSGKID  325 (361)
Q Consensus       249 ~~~~d~vld~~g~~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~l~~g~~~  325 (361)
                      +.++|+|+|+.|.+ ..+..++++|+++|+++.+|.......+....+..+..++.+....  ...+++++++++++.+.
T Consensus       273 g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ll~~g~l~  352 (384)
T cd08265         273 GWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPLHLEVLQVRRAQIVGAQGHSGHGIFPSVIKLMASGKID  352 (384)
T ss_pred             CCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCCCcccHHHHhhCceEEEEeeccCCcchHHHHHHHHHcCCCC
Confidence            56899999999863 4778999999999999999865443344445566677788777542  45799999999999996


Q ss_pred             CCCceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 018075          326 VKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF  359 (361)
Q Consensus       326 ~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi  359 (361)
                      +...+.+.|++  +++++|++.+.++ ..+|+++
T Consensus       353 ~~~~~~~~~~~--~~~~~a~~~~~~~-~~~kvvv  383 (384)
T cd08265         353 MTKIITARFPL--EGIMEAIKAASER-TDGKITI  383 (384)
T ss_pred             hHHheEEEeeH--HHHHHHHHHHhcC-CCceEEe
Confidence            54456788888  9999999997665 6788875

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=2.2e-40  Score=306.29  Aligned_cols=334  Identities=29%  Similarity=0.502  Sum_probs=274.1

Q ss_pred             ceEEEEeeCCceEEEEecCCCC-CCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCC
Q 018075           15 NMAAWLLGIKTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE   93 (361)
Q Consensus        15 ~~~~~~~~~~~l~~~~~~~p~~-~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   93 (361)
                      |++.++.+++++.+++.|.|.| +++||+||+.++++|++|+....|...    ...|.++|||++|+|+++|+++..++
T Consensus         1 m~~~~~~~~~~~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~vG~~v~~~~   76 (345)
T cd08287           1 MRATVIHGPGDIRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSP----TRAPAPIGHEFVGVVEEVGSEVTSVK   76 (345)
T ss_pred             CceeEEecCCceeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCC----CCCCcccccceEEEEEEeCCCCCccC
Confidence            4566777888999999999986 899999999999999999887766432    24578999999999999999999999


Q ss_pred             CCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCC--ceEECCCCCCcccccc------cchhH
Q 018075           94 VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAK--LCYKLPDNVSLEEGAM------CEPLS  165 (361)
Q Consensus        94 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~vP~~~~~~~aa~------~~~~~  165 (361)
                      +||+|++....+|+.|.+|+.|+...|.+..+++ ...+|+|++|+.++.+  .++++|++++++.+..      ...+.
T Consensus        77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~~~~  155 (345)
T cd08287          77 PGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWG-AFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMG  155 (345)
T ss_pred             CCCEEEeccccCCCCChhhhCcCcccCCCCCccc-CCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhcHHH
Confidence            9999998667789999999999999999876655 3467999999999975  9999999998722211      14577


Q ss_pred             HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHH
Q 018075          166 VGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       166 ~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~  245 (361)
                      +|+++++..++++|++|+|.|+|++|++++|+|+..|++.++++++++++.++++++|++.++++..  .++.+.+.++.
T Consensus       156 ~a~~~~~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~--~~~~~~i~~~~  233 (345)
T cd08287         156 TGHHAAVSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERG--EEAVARVRELT  233 (345)
T ss_pred             HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCc--ccHHHHHHHhc
Confidence            8888887788999999999999999999999999999977888988888999999999988877543  34444444432


Q ss_pred             hhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCC
Q 018075          246 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKI  324 (361)
Q Consensus       246 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~  324 (361)
                        .+.++|++||++|++..++.++++++++|+++.+|.......++....+.++.++.+.... .+.++++++++.++.+
T Consensus       234 --~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  311 (345)
T cd08287         234 --GGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRELFFRNVGLAGGPAPVRRYLPELLDDVLAGRI  311 (345)
T ss_pred             --CCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCCCccCHHHHHhcceEEEEecCCcHHHHHHHHHHHHcCCC
Confidence              3568999999998777899999999999999999865533334443456788888776543 5678999999999999


Q ss_pred             CCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075          325 DVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  360 (361)
Q Consensus       325 ~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~  360 (361)
                      ++.+.+.+.+++  +++++|++.+..+.. .|++|+
T Consensus       312 ~~~~~~~~~~~l--~~~~~a~~~~~~~~~-~k~~~~  344 (345)
T cd08287         312 NPGRVFDLTLPL--DEVAEGYRAMDERRA-IKVLLR  344 (345)
T ss_pred             CHHHhEEeeecH--HHHHHHHHHHhCCCc-eEEEeC
Confidence            654556788888  999999999887755 499886

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=100.00  E-value=5e-40  Score=303.66  Aligned_cols=334  Identities=38%  Similarity=0.672  Sum_probs=279.0

Q ss_pred             eEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 018075           16 MAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVG   95 (361)
Q Consensus        16 ~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G   95 (361)
                      ++.++.+++.+.+++.+.|++.+++|+|||+++++|+.|+....|...   +...|.++|+|++|+|+++|++++.+++|
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~---~~~~~~~~g~~~~G~V~~~G~~v~~~~~G   78 (343)
T cd08235           2 KAAVLHGPNDVRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHT---DLKPPRILGHEIAGEIVEVGDGVTGFKVG   78 (343)
T ss_pred             eEEEEecCCceEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCc---cCCCCcccccceEEEEEeeCCCCCCCCCC
Confidence            566777778899999999999999999999999999999988766432   13457799999999999999999999999


Q ss_pred             CEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCc-----eEECCCCCCcccccccchhHHHHHH
Q 018075           96 DRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKL-----CYKLPDNVSLEEGAMCEPLSVGVHA  170 (361)
Q Consensus        96 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-----~~~vP~~~~~~~aa~~~~~~~a~~~  170 (361)
                      |+|++.+...|+.|.+|..|+.++|+...+.+. ...|+|++|+.++.+.     ++++|+++++.+|+++.++.+|+++
T Consensus        79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~~~~~~a~~~  157 (343)
T cd08235          79 DRVFVAPHVPCGECHYCLRGNENMCPNYKKFGN-LYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALVEPLACCINA  157 (343)
T ss_pred             CEEEEccCCCCCCChHHHCcCcccCCCcceecc-CCCCcceeeEEecccccccccEEECCCCCCHHHHHhhhHHHHHHHH
Confidence            999999888999999999999999998765443 3579999999999999     9999999999999876788889999


Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCC
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (361)
                      ++..++++|++|||+|+|.+|++++|+|+..|++.++++++++++.+.++++|.+.+++++.  .++.+.+.++.  .+.
T Consensus       158 l~~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~--~~~~~~i~~~~--~~~  233 (343)
T cd08235         158 QRKAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAE--EDLVEKVRELT--DGR  233 (343)
T ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCCc--cCHHHHHHHHh--CCc
Confidence            87778999999999998999999999999999964788888888888889999988776533  45555554432  356


Q ss_pred             CccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC--cceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCC
Q 018075          251 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE--MTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVK  327 (361)
Q Consensus       251 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~  327 (361)
                      ++|++||++++...+...+++|+++|+++.++.....  ..+......++++++.++... .+.++.++++++++.+.+.
T Consensus       234 ~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~  313 (343)
T cd08235         234 GADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAASPEDYKEALELIASGKIDVK  313 (343)
T ss_pred             CCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEEecCChhhHHHHHHHHHcCCCChH
Confidence            7999999999766889999999999999998854332  233345567788888776654 5678899999999998644


Q ss_pred             CceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075          328 PLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  360 (361)
Q Consensus       328 ~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~  360 (361)
                      +.+...+++  +++.++++.+.+++ .+|+|++
T Consensus       314 ~~~~~~~~~--~~~~~a~~~~~~~~-~~k~vi~  343 (343)
T cd08235         314 DLITHRFPL--EDIEEAFELAADGK-SLKIVIT  343 (343)
T ss_pred             HheeeEeeH--HHHHHHHHHHhCCC-cEEEEeC
Confidence            456677888  99999999999998 8999874

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.9e-40  Score=305.61  Aligned_cols=326  Identities=26%  Similarity=0.421  Sum_probs=271.5

Q ss_pred             EEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 018075           17 AAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVG   95 (361)
Q Consensus        17 ~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G   95 (361)
                      ++.++.+ +.+++++++.|++.++||+|||.++++|++|++...|...   ....|.++|||++|+|+++|+++++|++|
T Consensus         2 ~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~---~~~~p~~~g~e~~G~V~~vG~~v~~~~~G   78 (337)
T cd05283           2 GYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWG---PTKYPLVPGHEIVGIVVAVGSKVTKFKVG   78 (337)
T ss_pred             ceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcC---CCCCCcccCcceeeEEEEECCCCcccCCC
Confidence            3444544 6899999999999999999999999999999998876542   23568899999999999999999999999


Q ss_pred             CEEEec-CCcCCCCCccccCCCCCCCCCccccC------CCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHH
Q 018075           96 DRVALE-PGISCGHCSLCKAGSYNLCPEMRFFG------SPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVG  167 (361)
Q Consensus        96 d~V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a  167 (361)
                      |+|+.. ....|++|.+|..+..++|+++.+..      +....|+|+||+.++.+.++++|+++++++++.+ ..+.+|
T Consensus        79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta  158 (337)
T cd05283          79 DRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITV  158 (337)
T ss_pred             CEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHHH
Confidence            999843 44589999999999999999876542      1234799999999999999999999999988855 467889


Q ss_pred             HHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhh
Q 018075          168 VHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       168 ~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~  247 (361)
                      |++++...+++|++++|.|+|++|++++++|+..|+ .++.+++++++.+.++++|++.+++...  .++.   +.    
T Consensus       159 ~~~~~~~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~~--~~~~---~~----  228 (337)
T cd05283         159 YSPLKRNGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATKD--PEAM---KK----  228 (337)
T ss_pred             HHHHHhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCcc--hhhh---hh----
Confidence            999887779999999998899999999999999999 6888888889999999999888765432  2221   11    


Q ss_pred             cCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCC
Q 018075          248 MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDV  326 (361)
Q Consensus       248 ~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~  326 (361)
                      .+.++|++||+++.......++++|+++|+++.+|.......++...++.++.++.+.... .++++.+++++++|++  
T Consensus       229 ~~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l--  306 (337)
T cd05283         229 AAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFGRKSVAGSLIGGRKETQEMLDFAAEHGI--  306 (337)
T ss_pred             ccCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCCCccCHHHHhcCceEEEEecccCHHHHHHHHHHHHhCCC--
Confidence            2468999999999875589999999999999999876544344555566789999987765 5678899999999998  


Q ss_pred             CCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075          327 KPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  360 (361)
Q Consensus       327 ~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~  360 (361)
                      ++.+ +.|++  +++++|++.+++++..||+|++
T Consensus       307 ~~~~-~~~~~--~~~~~a~~~~~~~~~~~k~v~~  337 (337)
T cd05283         307 KPWV-EVIPM--DGINEALERLEKGDVRYRFVLD  337 (337)
T ss_pred             ccce-EEEEH--HHHHHHHHHHHcCCCcceEeeC
Confidence            4444 67888  9999999999999999999875

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=8.7e-40  Score=301.33  Aligned_cols=334  Identities=38%  Similarity=0.672  Sum_probs=273.6

Q ss_pred             eEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCC
Q 018075           16 MAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVG   95 (361)
Q Consensus        16 ~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G   95 (361)
                      ++.++..++.+++.+++.|++.++||+|+|.++++|+.|+....+....   ...|.++|+|++|+|+++|++++.+++|
T Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~---~~~~~~~g~e~~G~V~~~G~~v~~~~~G   78 (337)
T cd08261           2 KALVCEKPGRLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPF---ASYPRILGHELSGEVVEVGEGVAGLKVG   78 (337)
T ss_pred             eEEEEeCCCceEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCc---CCCCcccccccEEEEEEeCCCCCCCCCC
Confidence            5566666788999999999999999999999999999999887664322   2447789999999999999999999999


Q ss_pred             CEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHHHHHHHHhcC
Q 018075           96 DRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRAN  175 (361)
Q Consensus        96 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~~~~  175 (361)
                      |+|++.+..+|+.|.-|..++++.|..-..++ ....|+|++|+.++++ ++++|+++++++|+++..+.+++++++..+
T Consensus        79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~~~~~~a~~~~~~~~  156 (337)
T cd08261          79 DRVVVDPYISCGECYACRKGRPNCCENLQVLG-VHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALVEPLAIGAHAVRRAG  156 (337)
T ss_pred             CEEEECCCCCCCCChhhhCcCcccCCCCCeee-ecCCCcceeEEEechh-eEECCCCCCHHHhhhhchHHHHHHHHHhcC
Confidence            99999888899999999999999995321111 1237999999999999 999999999999987677788888886688


Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      +++|++|||+|+|.+|++++|+|+.+|+ .++++.+++++.++++++|+++++++..  .++.+.+.++.  .+.++|++
T Consensus       157 l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~~--~~~~~~l~~~~--~~~~vd~v  231 (337)
T cd08261         157 VTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVGD--EDVAARLRELT--DGEGADVV  231 (337)
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCcc--cCHHHHHHHHh--CCCCCCEE
Confidence            9999999999989999999999999999 5777778899999999999988887543  34555555442  34679999


Q ss_pred             EEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCCCceEEEe
Q 018075          256 FDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRF  334 (361)
Q Consensus       256 ld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~  334 (361)
                      ||++|+...+..++++|+++|+++.++.......+....+..+++++.+.... .+.++.+++++++|.+.+.+.+...+
T Consensus       232 ld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~  311 (337)
T cd08261         232 IDATGNPASMEEAVELVAHGGRVVLVGLSKGPVTFPDPEFHKKELTILGSRNATREDFPDVIDLLESGKVDPEALITHRF  311 (337)
T ss_pred             EECCCCHHHHHHHHHHHhcCCEEEEEcCCCCCCccCHHHHHhCCCEEEEeccCChhhHHHHHHHHHcCCCChhhheEEEe
Confidence            99998766899999999999999999865543333444556677777765433 45788999999999995432566788


Q ss_pred             cCChhhHHHHHHHHhcC-CCceEEEEeC
Q 018075          335 GFTQKEIEDAFEISAQG-GNAIKVMFNL  361 (361)
Q Consensus       335 ~l~~~~~~~a~~~l~~~-~~~gkvvi~~  361 (361)
                      ++  ++++++++.+.++ ...+|+|+++
T Consensus       312 ~~--~~~~~a~~~~~~~~~~~~k~v~~~  337 (337)
T cd08261         312 PF--EDVPEAFDLWEAPPGGVIKVLIEF  337 (337)
T ss_pred             eH--HHHHHHHHHHhcCCCceEEEEEeC
Confidence            88  9999999999988 4889999875

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=100.00  E-value=6.5e-40  Score=304.95  Aligned_cols=334  Identities=33%  Similarity=0.507  Sum_probs=271.1

Q ss_pred             ceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCC
Q 018075           15 NMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE   93 (361)
Q Consensus        15 ~~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   93 (361)
                      |++.++.++ +.+++++++.|++++++|+|+|.++++|+.|+....|...    ..+|.++|+|++|+|+++|+++..++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~vG~~v~~~~   76 (363)
T cd08279           1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP----APLPAVLGHEGAGVVEEVGPGVTGVK   76 (363)
T ss_pred             CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC----CCCCccccccceEEEEEeCCCccccC
Confidence            355566655 6789999999999999999999999999999988776432    35678999999999999999999999


Q ss_pred             CCCEEEecCCcCCCCCccccCCCCCCCCCccccCC-------------------CCCCCceeEEEEecCCceEECCCCCC
Q 018075           94 VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS-------------------PPTNGSLAHKVVHPAKLCYKLPDNVS  154 (361)
Q Consensus        94 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~g~~~~~~~~~~~~~~~vP~~~~  154 (361)
                      +||+|++.+...|++|.+|++++.+.|++..++-.                   ....|+|++|+.++++.++++|++++
T Consensus        77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~  156 (363)
T cd08279          77 PGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIP  156 (363)
T ss_pred             CCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCC
Confidence            99999999999999999999999999987532100                   02469999999999999999999999


Q ss_pred             cccccccc-hhHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCC
Q 018075          155 LEEGAMCE-PLSVGVHACR-RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST  232 (361)
Q Consensus       155 ~~~aa~~~-~~~~a~~~l~-~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~  232 (361)
                      +++++.+. .+.+||.++. ..++++|++|||+|+|++|++++++|+..|++.|+.+++++++.++++++|++.+++...
T Consensus       157 ~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~  236 (363)
T cd08279         157 LDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASE  236 (363)
T ss_pred             hHHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCC
Confidence            99888664 6788888874 488999999999988999999999999999966888889999999999999987766432


Q ss_pred             CccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC--CcceechHhhhcCcEEEEeec---
Q 018075          233 DIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT--EMTVALTPAAAREVDVIGIFR---  307 (361)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~---  307 (361)
                        .++...+.++.  .+.++|++||++++...+...+++|+++|+++.++....  ...+....+..+...+.+...   
T Consensus       237 --~~~~~~l~~~~--~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  312 (363)
T cd08279         237 --DDAVEAVRDLT--DGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSA  312 (363)
T ss_pred             --ccHHHHHHHHc--CCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCc
Confidence              34544444432  256799999999966688999999999999999986542  223344445556666666532   


Q ss_pred             -CCCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEE
Q 018075          308 -YRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM  358 (361)
Q Consensus       308 -~~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvv  358 (361)
                       ..+.+++++++++++.+.+.+.+.+.|++  +++++|++.+.+++..+.++
T Consensus       313 ~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~~  362 (363)
T cd08279         313 NPRRDIPRLLDLYRAGRLKLDELVTRRYSL--DEINEAFADMLAGENARGVI  362 (363)
T ss_pred             CcHHHHHHHHHHHHcCCCCcceeEEEEEcH--HHHHHHHHHHhcCCceeEEe
Confidence             25678899999999999655456788888  99999999999887765554

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=100.00  E-value=7.3e-40  Score=305.72  Aligned_cols=333  Identities=27%  Similarity=0.449  Sum_probs=268.7

Q ss_pred             eEEEEeeCCceEEEEecCCCC-CCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCC
Q 018075           16 MAAWLLGIKTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEV   94 (361)
Q Consensus        16 ~~~~~~~~~~l~~~~~~~p~~-~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   94 (361)
                      ++.++.+++.++++++|+|++ +++||+|||.++++|++|++...|...    ...|+++|||++|+|+++|+++..+++
T Consensus         2 ~~~~~~~~~~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~----~~~p~~~g~e~~G~V~~vG~~v~~~~~   77 (375)
T cd08282           2 KAVVYGGPGNVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG----AEPGLVLGHEAMGEVEEVGSAVESLKV   77 (375)
T ss_pred             ceEEEecCCceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC----CCCCceeccccEEEEEEeCCCCCcCCC
Confidence            455566788999999999996 799999999999999999998876442    346889999999999999999999999


Q ss_pred             CCEEEecCCcCCCCCccccCCCCCCCCCccc---------cCCCCCCCceeEEEEecCC--ceEECCCCCCccc---cc-
Q 018075           95 GDRVALEPGISCGHCSLCKAGSYNLCPEMRF---------FGSPPTNGSLAHKVVHPAK--LCYKLPDNVSLEE---GA-  159 (361)
Q Consensus        95 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~g~~~~~~~~~~~--~~~~vP~~~~~~~---aa-  159 (361)
                      ||+|++.+...|+.|..|..++..+|.+..+         .......|+|++|+.++.+  .++++|+++++++   ++ 
T Consensus        78 Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~a~  157 (375)
T cd08282          78 GDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYLM  157 (375)
T ss_pred             CCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhhhheee
Confidence            9999998888999999999999999986421         1112236999999999976  8999999999984   44 


Q ss_pred             ccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhH
Q 018075          160 MCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDT  239 (361)
Q Consensus       160 ~~~~~~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~  239 (361)
                      +..++.+||+++..+++++|++|||.|+|++|++++|+|+..|+..++++++++++.++++++|+. .+++.  ..++.+
T Consensus       158 ~~~~~~ta~~a~~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~v~~~--~~~~~~  234 (375)
T cd08282         158 LSDIFPTGWHGLELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAI-PIDFS--DGDPVE  234 (375)
T ss_pred             ecchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCe-EeccC--cccHHH
Confidence            445788999999668899999999998999999999999999986678898999999999999984 34432  244444


Q ss_pred             HHHHHHhhcCCCccEEEEccCChH-----------HHHHHHHhhcCCCEEEEEccCCCC-------------cceechHh
Q 018075          240 DVGKIQNAMGSGIDVSFDCVGFDK-----------TMSTALNATRPGGKVCLIGLAKTE-------------MTVALTPA  295 (361)
Q Consensus       240 ~~~~~~~~~~~~~d~vld~~g~~~-----------~~~~~~~~l~~~G~~v~~g~~~~~-------------~~~~~~~~  295 (361)
                      .+.++.   ++++|++|||+|+..           .+..++++++++|+++.+|.....             ..+....+
T Consensus       235 ~i~~~~---~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (375)
T cd08282         235 QILGLE---PGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELSFDFGLL  311 (375)
T ss_pred             HHHHhh---CCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCccccccHHHH
Confidence            444432   367999999998752           488999999999999988753311             12233445


Q ss_pred             hhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          296 AAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       296 ~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      ..++..+.+.... .+.+..++++++++++.+...+.+.+++  +++++|++.+.++. .+|+|+++
T Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l--~~~~~a~~~~~~~~-~~kvvv~~  375 (375)
T cd08282         312 WAKGLSFGTGQAPVKKYNRQLRDLILAGRAKPSFVVSHVISL--EDAPEAYARFDKRL-ETKVVIKP  375 (375)
T ss_pred             HhcCcEEEEecCCchhhHHHHHHHHHcCCCChHHcEEEEeeH--HHHHHHHHHHhcCC-ceEEEeCC
Confidence            5666766665443 5678889999999999654457899999  99999999999988 89999864

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd05281 TDH Threonine dehydrogenase

Probab=100.00  E-value=5.8e-40  Score=302.89  Aligned_cols=335  Identities=33%  Similarity=0.581  Sum_probs=271.6

Q ss_pred             eEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCC
Q 018075           16 MAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEV   94 (361)
Q Consensus        16 ~~~~~~~~~-~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   94 (361)
                      ++.++.+++ .+++.+.+.|.|.++|++|||.++++|+.|+....+..........|.++|+|++|+|+.+|++++.+++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~   81 (341)
T cd05281           2 KAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVKV   81 (341)
T ss_pred             cceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCCC
Confidence            455566554 6999999999999999999999999999998865432111112345778999999999999999999999


Q ss_pred             CCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHHHHHHHHhc
Q 018075           95 GDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRA  174 (361)
Q Consensus        95 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~~~  174 (361)
                      ||+|++.+..+|++|.+|+.|.+++|++.++.+. ...|+|++|++++.+.++++|++++++.++++.++.++++++. .
T Consensus        82 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~v~v~~~~~~~lP~~~~~~~a~~~~~~~~a~~~~~-~  159 (341)
T cd05281          82 GDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGV-DTDGCFAEYVVVPEENLWKNDKDIPPEIASIQEPLGNAVHTVL-A  159 (341)
T ss_pred             CCEEEECCccCCCCChHHHCcCcccCcccceEec-cCCCcceEEEEechHHcEECcCCCCHHHhhhhhHHHHHHHHHH-h
Confidence            9999998888999999999999999998776653 3579999999999999999999999876766678888888775 4


Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccE
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV  254 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  254 (361)
                      ..++|++|||.|+|++|++++|+|+.+|.+.++++++++++.+.++++|++.++++.  ..++. .+.++.  .++++|+
T Consensus       160 ~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~-~~~~~~--~~~~vd~  234 (341)
T cd05281         160 GDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPR--EEDVV-EVKSVT--DGTGVDV  234 (341)
T ss_pred             cCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCcc--cccHH-HHHHHc--CCCCCCE
Confidence            458999999998899999999999999986677778889999999999998776543  23454 444432  3568999


Q ss_pred             EEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceech-HhhhcCcEEEEeecC--CCcHHHHHHHHHcCCCCCCCceE
Q 018075          255 SFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT-PAAAREVDVIGIFRY--RSTWPLCIEFLRSGKIDVKPLIT  331 (361)
Q Consensus       255 vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~i~~~~~~--~~~~~~~~~~l~~g~~~~~~~~~  331 (361)
                      +||++|+......++++|+++|+++.+|........... ....++.++.+....  .+.++++++++.+|.+.+.+.+.
T Consensus       235 vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~  314 (341)
T cd05281         235 VLEMSGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRKMFETWYQVSALLKSGKVDLSPVIT  314 (341)
T ss_pred             EEECCCCHHHHHHHHHHhccCCEEEEEccCCCCcccccchhhhccceEEEEEecCCcchhHHHHHHHHHcCCCChhHheE
Confidence            999998777889999999999999999865432222222 356677777776532  45678899999999986556677


Q ss_pred             EEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075          332 HRFGFTQKEIEDAFEISAQGGNAIKVMFN  360 (361)
Q Consensus       332 ~~~~l~~~~~~~a~~~l~~~~~~gkvvi~  360 (361)
                      +.+++  ++++++++.+.+++ .||+|++
T Consensus       315 ~~~~~--~~~~~a~~~~~~~~-~gk~vv~  340 (341)
T cd05281         315 HKLPL--EDFEEAFELMRSGK-CGKVVLY  340 (341)
T ss_pred             EEecH--HHHHHHHHHHhcCC-CceEEec
Confidence            78888  99999999999998 8999985

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=100.00  E-value=6.6e-40  Score=303.64  Aligned_cols=335  Identities=28%  Similarity=0.425  Sum_probs=275.4

Q ss_pred             eEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccc---------cccCCCCcccCcceeEEEEEe
Q 018075           16 MAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCA---------NFIVKKPMVIGHECAGIIEEV   85 (361)
Q Consensus        16 ~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~---------~~~~~~p~~~G~e~~G~V~~v   85 (361)
                      ++.++..+ ..++++++|.|++.++||+|+|.++++|++|++...|....         ......|.++|+|++|+|+++
T Consensus         2 ~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~v   81 (350)
T cd08240           2 KAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVAV   81 (350)
T ss_pred             eeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEee
Confidence            45555544 45899999999999999999999999999999887663210         001244678999999999999


Q ss_pred             CCCCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chh
Q 018075           86 GSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPL  164 (361)
Q Consensus        86 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~  164 (361)
                      |++++.+++||+|++.+...|+.|..|..++.++|.....++. ...|+|++|+.++.+.++++|+++++.+++.+ ..+
T Consensus        82 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~~~  160 (350)
T cd08240          82 GPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGI-FQDGGYAEYVIVPHSRYLVDPGGLDPALAATLACSG  160 (350)
T ss_pred             CCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceee-eccCcceeeEEecHHHeeeCCCCCCHHHeehhhchh
Confidence            9999999999999999889999999999999999988655543 25799999999999999999999999988855 578


Q ss_pred             HHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHH
Q 018075          165 SVGVHACRR-ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK  243 (361)
Q Consensus       165 ~~a~~~l~~-~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~  243 (361)
                      .+||++++. ...+++++|||+|+|++|++++|+|+..|++.|+++++++++.+.++++|++.+++..  ..++.+.+.+
T Consensus       161 ~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~  238 (350)
T cd08240         161 LTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGS--DPDAAKRIIK  238 (350)
T ss_pred             hhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecCC--CccHHHHHHH
Confidence            899999876 4556899999999999999999999999997788888999999999999998766542  2344444443


Q ss_pred             HHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcC
Q 018075          244 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSG  322 (361)
Q Consensus       244 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g  322 (361)
                      ..   ++++|++||++|.......++++|+++|+++.+|..............+++.++.+.... .+++.++++++++|
T Consensus       239 ~~---~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ll~~~  315 (350)
T cd08240         239 AA---GGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALTIQGSYVGSLEELRELVALAKAG  315 (350)
T ss_pred             Hh---CCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCCcccHHHHhhcCcEEEEcccCCHHHHHHHHHHHHcC
Confidence            32   338999999999766899999999999999999866544344444556688888887655 46788999999999


Q ss_pred             CCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075          323 KIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  360 (361)
Q Consensus       323 ~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~  360 (361)
                      .+.  +...+.|++  ++++++++.+.+++..+|++++
T Consensus       316 ~i~--~~~~~~~~~--~~~~~a~~~~~~~~~~gkvvv~  349 (350)
T cd08240         316 KLK--PIPLTERPL--SDVNDALDDLKAGKVVGRAVLK  349 (350)
T ss_pred             CCc--cceeeEEcH--HHHHHHHHHHHcCCccceEEec
Confidence            984  345567888  9999999999999889999986

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=6.7e-40  Score=305.40  Aligned_cols=335  Identities=32%  Similarity=0.526  Sum_probs=275.8

Q ss_pred             eEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCC---
Q 018075           16 MAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS---   91 (361)
Q Consensus        16 ~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~---   91 (361)
                      ++.++..+ .++++++.|.|.+.++||+|++.++++|++|+....+...    ...|.++|+|++|+|+++|+++++   
T Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~----~~~p~~~g~e~~G~v~~vG~~~~~~~~   77 (367)
T cd08263           2 KAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELP----FPPPFVLGHEISGEVVEVGPNVENPYG   77 (367)
T ss_pred             eeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCC----CCCCcccccccceEEEEeCCCCCCCCc
Confidence            44455454 5689999999999999999999999999999988766432    256789999999999999999988   


Q ss_pred             CCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCC---------------------CCCCCceeEEEEecCCceEECC
Q 018075           92 LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS---------------------PPTNGSLAHKVVHPAKLCYKLP  150 (361)
Q Consensus        92 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~g~~~~~~~~~~~~~~~vP  150 (361)
                      |++||+|++.+...|+.|.+|..+..++|++..+|..                     ....|+|++|+.++.+.++++|
T Consensus        78 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P  157 (367)
T cd08263          78 LSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPLP  157 (367)
T ss_pred             CCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEECC
Confidence            9999999998888999999999999999998754321                     0236899999999999999999


Q ss_pred             CCCCccccccc-chhHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEe
Q 018075          151 DNVSLEEGAMC-EPLSVGVHACRR-ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETA  228 (361)
Q Consensus       151 ~~~~~~~aa~~-~~~~~a~~~l~~-~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~  228 (361)
                      +++++.+++.+ ..+.+||+++.. ..++++++|||+|+|++|++++++|+..|+..+++++.++++.+.++++|++.++
T Consensus       158 ~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~  237 (367)
T cd08263         158 ESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTV  237 (367)
T ss_pred             CCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEe
Confidence            99999988855 478899999865 6789999999999899999999999999996688888889999999999998877


Q ss_pred             ecCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC--CcceechHhhhcCcEEEEee
Q 018075          229 KVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT--EMTVALTPAAAREVDVIGIF  306 (361)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~  306 (361)
                      +...  .++...+....  .+.++|++||++++......++++|+++|+++.++....  ...+....++.++.++.++.
T Consensus       238 ~~~~--~~~~~~l~~~~--~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (367)
T cd08263         238 NAAK--EDAVAAIREIT--GGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKIIGSY  313 (367)
T ss_pred             cCCc--ccHHHHHHHHh--CCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCeEEEecC
Confidence            6432  34544544432  357899999999976578999999999999999985543  22333444556788887765


Q ss_pred             cC--CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075          307 RY--RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  360 (361)
Q Consensus       307 ~~--~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~  360 (361)
                      ..  .+.++.++++++++.+.+.+.+++.+++  ++++++++.++++...||+|+.
T Consensus       314 ~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~g~~~~~  367 (367)
T cd08263         314 GARPRQDLPELVGLAASGKLDPEALVTHKYKL--EEINEAYENLRKGLIHGRAIVE  367 (367)
T ss_pred             CCCcHHHHHHHHHHHHcCCCCcccceeEEecH--HHHHHHHHHHhcCCccceeeeC
Confidence            43  3578899999999999655556788888  9999999999999889999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=100.00  E-value=2.4e-40  Score=303.36  Aligned_cols=304  Identities=19%  Similarity=0.252  Sum_probs=244.8

Q ss_pred             eEEEEeeCC------ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCC
Q 018075           16 MAAWLLGIK------TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEV   89 (361)
Q Consensus        16 ~~~~~~~~~------~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   89 (361)
                      +++++.+++      .++++++|.|.|+++||+|||.++|+|++|++...|....  ....|.++|||++|+|+++|+++
T Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~--~~~~p~v~G~e~~G~V~~vG~~v   79 (324)
T cd08291           2 KALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGS--TKALPVPPGFEGSGTVVAAGGGP   79 (324)
T ss_pred             eEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCC--CCCCCcCCCcceEEEEEEECCCc
Confidence            456665443      5888899999999999999999999999999988764321  13568899999999999999999


Q ss_pred             CC-CCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHH
Q 018075           90 KS-LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVG  167 (361)
Q Consensus        90 ~~-~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a  167 (361)
                      ++ |++||+|++.+.                           .+|+|+||+.++++.++++|+++++++|+.+ ....+|
T Consensus        80 ~~~~~vGd~V~~~~~---------------------------~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta  132 (324)
T cd08291          80 LAQSLIGKRVAFLAG---------------------------SYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTA  132 (324)
T ss_pred             cccCCCCCEEEecCC---------------------------CCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHH
Confidence            96 999999986310                           1499999999999999999999999988743 456677


Q ss_pred             HHHHHhcCCCCCCEEEEE-C-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHH
Q 018075          168 VHACRRANVGPETNVMIM-G-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       168 ~~~l~~~~~~~g~~vlI~-G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~  245 (361)
                      |..++.... ++++++|+ | +|++|++++|+|+.+|+ .++++++++++.+.++++|++.++++..  .++.+.+.++.
T Consensus       133 ~~~~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~--~~~~~~v~~~~  208 (324)
T cd08291         133 LGMLETARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGAEYVLNSSD--PDFLEDLKELI  208 (324)
T ss_pred             HHHHHhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEECCC--ccHHHHHHHHh
Confidence            765555554 56677775 4 79999999999999999 5888889999999999999999887543  45655555443


Q ss_pred             hhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC-c-ceechHhhhcCcEEEEeecC-------CCcHHHHH
Q 018075          246 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-M-TVALTPAAAREVDVIGIFRY-------RSTWPLCI  316 (361)
Q Consensus       246 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~-~~~~~~~~~~~~~i~~~~~~-------~~~~~~~~  316 (361)
                        .+.++|++||++|+. .....+++++++|+++.+|..... . .++...++.+++++.+++..       .+.++.++
T Consensus       209 --~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (324)
T cd08291         209 --AKLNATIFFDAVGGG-LTGQILLAMPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLK  285 (324)
T ss_pred             --CCCCCcEEEECCCcH-HHHHHHHhhCCCCEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHH
Confidence              356899999999977 678889999999999999865432 1 24345567788898887654       23577888


Q ss_pred             HHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075          317 EFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  360 (361)
Q Consensus       317 ~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~  360 (361)
                      ++++ +.+  ++.++++|+|  +++++|++.+.++...||+++.
T Consensus       286 ~~~~-~~~--~~~i~~~~~l--~~~~~a~~~~~~~~~~Gkvv~~  324 (324)
T cd08291         286 KLVK-TEL--KTTFASRYPL--ALTLEAIAFYSKNMSTGKKLLI  324 (324)
T ss_pred             HHHh-Ccc--ccceeeEEcH--HHHHHHHHHHHhCCCCCeEEeC
Confidence            8887 777  6788899999  9999999999999899999874

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=100.00  E-value=4.9e-40  Score=309.19  Aligned_cols=343  Identities=20%  Similarity=0.223  Sum_probs=274.1

Q ss_pred             CcccceEEEEee-----C-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccc------cc-cCCCC-cccCc
Q 018075           11 DKNQNMAAWLLG-----I-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCA------NF-IVKKP-MVIGH   76 (361)
Q Consensus        11 ~~~~~~~~~~~~-----~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~------~~-~~~~p-~~~G~   76 (361)
                      ++.+|++.++..     | +.++++++|.|.+++++|+||+.++++|++|++...+....      .. ....| .++||
T Consensus         4 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~   83 (398)
T TIGR01751         4 VPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGS   83 (398)
T ss_pred             cchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceeccc
Confidence            455666666632     2 46999999999999999999999999999998766543210      00 01223 38999


Q ss_pred             ceeEEEEEeCCCCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcc
Q 018075           77 ECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLE  156 (361)
Q Consensus        77 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~  156 (361)
                      |++|+|+++|++++.+++||+|++.+...|++|..|+.|++.+|+.+.+++.....|+|+||++++.+.++++|++++++
T Consensus        84 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~~~  163 (398)
T TIGR01751        84 DASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWE  163 (398)
T ss_pred             ceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCCHH
Confidence            99999999999999999999999998899999999999999999987766655568999999999999999999999999


Q ss_pred             ccccc-chhHHHHHHHHh---cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecC
Q 018075          157 EGAMC-EPLSVGVHACRR---ANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS  231 (361)
Q Consensus       157 ~aa~~-~~~~~a~~~l~~---~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  231 (361)
                      +++.+ ..+.+||.++..   .++++|++|||+|+ |++|++++++|+.+|++ ++.++.++++.+.++++|++.++++.
T Consensus       164 ~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~-vi~~~~~~~~~~~~~~~g~~~~v~~~  242 (398)
T TIGR01751       164 EAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGN-PVAVVSSPEKAEYCRELGAEAVIDRN  242 (398)
T ss_pred             HHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCe-EEEEcCCHHHHHHHHHcCCCEEecCC
Confidence            88855 478889988753   67899999999995 99999999999999995 66677888899999999999888753


Q ss_pred             CCc--------------------cchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC-cce
Q 018075          232 TDI--------------------EDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTV  290 (361)
Q Consensus       232 ~~~--------------------~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~  290 (361)
                      ...                    ..+.+.+.++  +.+.++|++|||+|.. .+...+++++++|+++.+|..... ..+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~  319 (398)
T TIGR01751       243 DFGHWGRLPDLNTQAPKEWTKSFKRFGKRIREL--TGGEDPDIVFEHPGRA-TFPTSVFVCRRGGMVVICGGTTGYNHDY  319 (398)
T ss_pred             CcchhhccccccccccchhhhcchhHHHHHHHH--cCCCCceEEEECCcHH-HHHHHHHhhccCCEEEEEccccCCCCCc
Confidence            210                    0112222222  2346799999999964 889999999999999999865432 344


Q ss_pred             echHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          291 ALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       291 ~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      +...+..++.++.+.... .+++++++++++++++  .+.+++.+++  ++++++++.+.++...||+|+++
T Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l--~~~~~~~~~l--~~~~~a~~~~~~~~~~gkvvv~~  387 (398)
T TIGR01751       320 DNRYLWMRQKRIQGSHFANLREAWEANRLVAKGRI--DPTLSKVYPL--EEIGQAHQDVHRNHHQGNVAVLV  387 (398)
T ss_pred             CHHHHhhcccEEEccccCcHHHHHHHHHHHHCCCc--ccceeeEEcH--HHHHHHHHHHHcCCCCceEEEEe
Confidence            455566677777776543 3457889999999998  4557788888  99999999999999999999864

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=100.00  E-value=6.2e-40  Score=302.58  Aligned_cols=329  Identities=34%  Similarity=0.627  Sum_probs=269.2

Q ss_pred             CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCC
Q 018075           24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPG  103 (361)
Q Consensus        24 ~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~  103 (361)
                      ..+++++.|.|+|+++||+|||.++++|+.|+....+..........|.++|+|++|+|+++|+++++|++||+|++.+.
T Consensus         9 ~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~   88 (340)
T TIGR00692         9 YGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVSVETH   88 (340)
T ss_pred             CCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEEECCc
Confidence            56899999999999999999999999999999876543211112345778999999999999999999999999999988


Q ss_pred             cCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHHHHHHHHhcCCCCCCEEE
Q 018075          104 ISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVM  183 (361)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vl  183 (361)
                      ..|+.|..|..+..++|++..+++. ...|+|++|++++++.++++|+++++++|+...++.+|++++ ....++|++++
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~a~~~~-~~~~~~g~~vl  166 (340)
T TIGR00692        89 IVCGKCYACRRGQYHVCQNTKIFGV-DTDGCFAEYAVVPAQNIWKNPKSIPPEYATIQEPLGNAVHTV-LAGPISGKSVL  166 (340)
T ss_pred             CCCCCChhhhCcChhhCcCcceEee-cCCCcceeEEEeehHHcEECcCCCChHhhhhcchHHHHHHHH-HccCCCCCEEE
Confidence            8999999999999999999866642 257999999999999999999999987777667888888876 34568999999


Q ss_pred             EECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccCChH
Q 018075          184 IMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDK  263 (361)
Q Consensus       184 I~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~  263 (361)
                      |.|+|++|++++|+|+.+|++.|+++++++++.++++++|++.++++..  .++.+.+.++.  .+.++|++||++|+..
T Consensus       167 I~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--~~~~~~l~~~~--~~~~~d~vld~~g~~~  242 (340)
T TIGR00692       167 VTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFK--EDVVKEVADLT--DGEGVDVFLEMSGAPK  242 (340)
T ss_pred             EECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccc--cCHHHHHHHhc--CCCCCCEEEECCCCHH
Confidence            9888999999999999999965777888899999999999987776432  45555554442  3568999999998777


Q ss_pred             HHHHHHHhhcCCCEEEEEccCCCCcceech-HhhhcCcEEEEeecC--CCcHHHHHHHHHcCCCCCCCceEEEecCChhh
Q 018075          264 TMSTALNATRPGGKVCLIGLAKTEMTVALT-PAAAREVDVIGIFRY--RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKE  340 (361)
Q Consensus       264 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~i~~~~~~--~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~  340 (361)
                      .+...+++|+++|+++.+|.......+... .+.++..++.+....  .+.+.++++++++|.++..+.+.+.+++  ++
T Consensus       243 ~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l--~~  320 (340)
T TIGR00692       243 ALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITGRHMFETWYTVSRLIQSGKLDLDPIITHKFKF--DK  320 (340)
T ss_pred             HHHHHHHhhcCCCEEEEEccCCCCcccchhhhhhhcceEEEEEecCCchhhHHHHHHHHHcCCCChHHheeeeeeH--HH
Confidence            889999999999999999865433233333 566777888776532  4567889999999999654557788888  99


Q ss_pred             HHHHHHHHhcCCCceEEEEeC
Q 018075          341 IEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       341 ~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      ++++++.+.++.. ||+|+++
T Consensus       321 ~~~a~~~~~~~~~-gkvvv~~  340 (340)
T TIGR00692       321 FEKGFELMRSGQT-GKVILSL  340 (340)
T ss_pred             HHHHHHHHhcCCC-ceEEEeC
Confidence            9999999998864 9999874

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=100.00  E-value=1.7e-39  Score=300.05  Aligned_cols=333  Identities=39%  Similarity=0.677  Sum_probs=274.3

Q ss_pred             ceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCC
Q 018075           15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEV   94 (361)
Q Consensus        15 ~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   94 (361)
                      |+++++.+.+.+.+++.++|++.++||+||+.++++|+.|+....+..    ....|.++|+|++|+|+++|+++..|++
T Consensus         1 ~~a~~~~~~~~l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~----~~~~~~~~g~~~~G~V~~~g~~v~~~~~   76 (343)
T cd08236           1 MKALVLTGPGDLRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTG----AYHPPLVLGHEFSGTVEEVGSGVDDLAV   76 (343)
T ss_pred             CeeEEEecCCceeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCC----CCCCCcccCcceEEEEEEECCCCCcCCC
Confidence            356666677789999999999999999999999999999998776532    2345789999999999999999999999


Q ss_pred             CCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHHHHHHHHhc
Q 018075           95 GDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRA  174 (361)
Q Consensus        95 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~~~  174 (361)
                      ||+|++.+...|+.|.+|..+++..|+...+++. ...|+|++|+.++++.++++|+++++++|+.++++.+||+++...
T Consensus        77 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~~~~~ta~~~l~~~  155 (343)
T cd08236          77 GDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGS-RRDGAFAEYVSVPARNLIKIPDHVDYEEAAMIEPAAVALHAVRLA  155 (343)
T ss_pred             CCEEEEcCCCCCCCChhHHCcChhhCCCcceEec-ccCCcccceEEechHHeEECcCCCCHHHHHhcchHHHHHHHHHhc
Confidence            9999998888899999999999999998765553 357999999999999999999999999998777788999998778


Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccE
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV  254 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  254 (361)
                      .++++++|||+|+|.+|++++|+|+.+|++.+++++.++++.++++++|++.++++..  .. ...+..+.  .+.++|+
T Consensus       156 ~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~--~~-~~~~~~~~--~~~~~d~  230 (343)
T cd08236         156 GITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE--ED-VEKVRELT--EGRGADL  230 (343)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcc--cc-HHHHHHHh--CCCCCCE
Confidence            8999999999998999999999999999965888888888889999999988776543  22 33333332  3567999


Q ss_pred             EEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcce---echHhhhcCcEEEEeecC------CCcHHHHHHHHHcCCCC
Q 018075          255 SFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTV---ALTPAAAREVDVIGIFRY------RSTWPLCIEFLRSGKID  325 (361)
Q Consensus       255 vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~---~~~~~~~~~~~i~~~~~~------~~~~~~~~~~l~~g~~~  325 (361)
                      +|||+|....+..++++|+++|+++.+|.......+   +...+..++.++.++...      .+.+++++++++++.+.
T Consensus       231 vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  310 (343)
T cd08236         231 VIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKIK  310 (343)
T ss_pred             EEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHHHHcCCCC
Confidence            999998766889999999999999999865433111   223345677888776543      45688899999999985


Q ss_pred             CCCceEEEecCChhhHHHHHHHHhc-CCCceEEEE
Q 018075          326 VKPLITHRFGFTQKEIEDAFEISAQ-GGNAIKVMF  359 (361)
Q Consensus       326 ~~~~~~~~~~l~~~~~~~a~~~l~~-~~~~gkvvi  359 (361)
                      ..+.+.+.+++  ++++++++.+.+ +...+|+|+
T Consensus       311 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~k~v~  343 (343)
T cd08236         311 VEPLITHRLPL--EDGPAAFERLADREEFSGKVLL  343 (343)
T ss_pred             hHHheeeeecH--HHHHHHHHHHHcCCCCeeEEeC
Confidence            43446678888  999999999998 667888875

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=100.00  E-value=2.2e-39  Score=298.77  Aligned_cols=330  Identities=26%  Similarity=0.428  Sum_probs=268.1

Q ss_pred             ceEEEEeeCCceE-EEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCC
Q 018075           15 NMAAWLLGIKTLK-IQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE   93 (361)
Q Consensus        15 ~~~~~~~~~~~l~-~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   93 (361)
                      |+++++.+++... ++++|.|.+.++||+|||.++++|++|+....|...    ...|.++|+|++|+|+++|++++.|+
T Consensus         1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~----~~~~~~~g~e~~G~V~~~G~~v~~~~   76 (338)
T PRK09422          1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFG----DKTGRILGHEGIGIVKEVGPGVTSLK   76 (338)
T ss_pred             CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCC----CCCCccCCcccceEEEEECCCCccCC
Confidence            4566676666555 899999999999999999999999999988766431    23477999999999999999999999


Q ss_pred             CCCEEEecC-CcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHH
Q 018075           94 VGDRVALEP-GISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHAC  171 (361)
Q Consensus        94 ~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l  171 (361)
                      +||+|++.+ ..+|+.|.+|..+...+|.+....+. ...|+|+||+.++.+.++++|+++++.+++.+ ..+.+||+++
T Consensus        77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~  155 (338)
T PRK09422         77 VGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGY-TVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAI  155 (338)
T ss_pred             CCCEEEEccCCCCCCCChhhcCCCcccCCCccccCc-cccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHH
Confidence            999999864 45899999999999999987754432 35799999999999999999999999988855 4678899998


Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHH-cCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCC
Q 018075          172 RRANVGPETNVMIMGSGPIGLVTLLAARA-FGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       172 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~-~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (361)
                      +.+++++|++|||+|+|++|++++++|+. .|+ .++++++++++.+.++++|++.++++.. ..++.+.+.+.   .+ 
T Consensus       156 ~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~-~~~~~~~v~~~---~~-  229 (338)
T PRK09422        156 KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSKR-VEDVAKIIQEK---TG-  229 (338)
T ss_pred             HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEecccc-cccHHHHHHHh---cC-
Confidence            77889999999999999999999999998 499 6888889999999999999988776432 12344444433   23 


Q ss_pred             CccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCCCc
Q 018075          251 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPL  329 (361)
Q Consensus       251 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~  329 (361)
                      ++|+++.+.++...+..++++++++|+++.+|.......+.......+..++.+.... .+.++.+++++++|.+  .+.
T Consensus       230 ~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~  307 (338)
T PRK09422        230 GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPESMDLSIPRLVLDGIEVVGSLVGTRQDLEEAFQFGAEGKV--VPK  307 (338)
T ss_pred             CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCCceecHHHHhhcCcEEEEecCCCHHHHHHHHHHHHhCCC--Ccc
Confidence            6895555445566899999999999999999865443344445566778888776543 5678899999999998  444


Q ss_pred             eEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075          330 ITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  360 (361)
Q Consensus       330 ~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~  360 (361)
                      + ..+++  +++++|++.+.++...||++++
T Consensus       308 v-~~~~~--~~~~~a~~~~~~~~~~gkvvv~  335 (338)
T PRK09422        308 V-QLRPL--EDINDIFDEMEQGKIQGRMVID  335 (338)
T ss_pred             E-EEEcH--HHHHHHHHHHHcCCccceEEEe
Confidence            4 45788  9999999999999999999985

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-39  Score=300.99  Aligned_cols=309  Identities=18%  Similarity=0.210  Sum_probs=242.1

Q ss_pred             cCCcccceEEEEe-------eCCceEEEE---ecCC-CCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCc-
Q 018075            9 EGDKNQNMAAWLL-------GIKTLKIQP---YHLP-TLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGH-   76 (361)
Q Consensus         9 ~~~~~~~~~~~~~-------~~~~l~~~~---~~~p-~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~-   76 (361)
                      +....++++.++.       .++.+++++   .+.| ++++|||||||.++++|+.|.....+...   ....|+++|+ 
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~---~~~~p~~~G~~   79 (348)
T PLN03154          3 EGQVVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHD---SYLPPFVPGQR   79 (348)
T ss_pred             CCccccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCC---CCCCCcCCCCe
Confidence            3344445555553       224688887   3665 35899999999999999998864432111   1235889997 


Q ss_pred             -ceeEEEEEeCCCCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCc--eEE--CCC
Q 018075           77 -ECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKL--CYK--LPD  151 (361)
Q Consensus        77 -e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~--vP~  151 (361)
                       |++|+|..+|+++++|++||+|+.                               .++|+||+.++.+.  +.+  +|+
T Consensus        80 ~~~~G~v~~vg~~v~~~~~Gd~V~~-------------------------------~~~~aey~~v~~~~~~~~~~~~P~  128 (348)
T PLN03154         80 IEGFGVSKVVDSDDPNFKPGDLISG-------------------------------ITGWEEYSLIRSSDNQLRKIQLQD  128 (348)
T ss_pred             eEeeEEEEEEecCCCCCCCCCEEEe-------------------------------cCCcEEEEEEeccccceEEccCcC
Confidence             889999999999999999999985                               36899999998753  544  589


Q ss_pred             CCCcc-cccc-cchhHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHH-HcCCCE
Q 018075          152 NVSLE-EGAM-CEPLSVGVHACRR-ANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGADE  226 (361)
Q Consensus       152 ~~~~~-~aa~-~~~~~~a~~~l~~-~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~  226 (361)
                      +++++ +|+. ..++.|||+++.. .++++|++|||+|+ |++|++++|+||.+|+ .++++++++++.++++ ++|++.
T Consensus       129 ~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~~~~~k~~~~~~~lGa~~  207 (348)
T PLN03154        129 DIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSAGSSQKVDLLKNKLGFDE  207 (348)
T ss_pred             CCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhcCCCE
Confidence            99986 5554 4588999999864 88999999999995 9999999999999999 5888888999999887 799999


Q ss_pred             EeecCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCc------ceechHhhhcCc
Q 018075          227 TAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM------TVALTPAAAREV  300 (361)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~------~~~~~~~~~~~~  300 (361)
                      ++++.. ..++.+.+++.   .+.++|++||++|+. .++.++++++++|+++.+|......      .+....++.+++
T Consensus       208 vi~~~~-~~~~~~~i~~~---~~~gvD~v~d~vG~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~  282 (348)
T PLN03154        208 AFNYKE-EPDLDAALKRY---FPEGIDIYFDNVGGD-MLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRI  282 (348)
T ss_pred             EEECCC-cccHHHHHHHH---CCCCcEEEEECCCHH-HHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccc
Confidence            888642 12455555444   246899999999975 8999999999999999999654321      113345677888


Q ss_pred             EEEEeecC------CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          301 DVIGIFRY------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       301 ~i~~~~~~------~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      ++.|++..      .+.++++++++++|++  ++.+...|+|  +++++|++.+++++..||+|+++
T Consensus       283 ~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l--~~~~~~~~~L--~~~~~A~~~l~~g~~~GKvVl~~  345 (348)
T PLN03154        283 RMQGFLQSDYLHLFPQFLENVSRYYKQGKI--VYIEDMSEGL--ESAPAALVGLFSGKNVGKQVIRV  345 (348)
T ss_pred             eEEEEEHHHHHHHHHHHHHHHHHHHHCCCc--cCceecccCH--HHHHHHHHHHHcCCCCceEEEEe
Confidence            99887653      3457789999999999  5556677888  99999999999999999999874

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=100.00  E-value=3.5e-39  Score=296.96  Aligned_cols=331  Identities=37%  Similarity=0.656  Sum_probs=275.3

Q ss_pred             ceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCC
Q 018075           15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEV   94 (361)
Q Consensus        15 ~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   94 (361)
                      |++.++.+++.+++++.+.|++.++||+|||+++++|+.|+....|...    ..+|.++|+|++|+|+++|++++.+++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~----~~~p~~~g~~~~G~v~~vG~~v~~~~~   76 (334)
T cd08234           1 MKALVYEGPGELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFG----AAPPLVPGHEFAGVVVAVGSKVTGFKV   76 (334)
T ss_pred             CeeEEecCCCceEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCC----CCCCcccccceEEEEEEeCCCCCCCCC
Confidence            3566777778899999999999999999999999999999988776432    236789999999999999999999999


Q ss_pred             CCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHHHHHHHHhc
Q 018075           95 GDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRA  174 (361)
Q Consensus        95 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~~~  174 (361)
                      ||+|++.+...|+.|.++..+++++|+.+..++. ...|+|++|+.++.+.++++|+++++.+|+.+.++.+++++++..
T Consensus        77 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~~  155 (334)
T cd08234          77 GDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGV-TRNGGFAEYVVVPAKQVYKIPDNLSFEEAALAEPLSCAVHGLDLL  155 (334)
T ss_pred             CCEEEEcCCcCCCCCccccCcChhhCCCcceecc-CCCCcceeEEEecHHHcEECcCCCCHHHHhhhhHHHHHHHHHHhc
Confidence            9999998888999999999999999998764432 247999999999999999999999999988667778888888668


Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccE
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV  254 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  254 (361)
                      ++++|+++||+|+|.+|++++++|+..|+++++++++++++.+.++++|++.++++..  .++... +   ...+.++|+
T Consensus       156 ~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~-~---~~~~~~vd~  229 (334)
T cd08234         156 GIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSR--EDPEAQ-K---EDNPYGFDV  229 (334)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCC--CCHHHH-H---HhcCCCCcE
Confidence            8999999999998999999999999999965888888999999999999887666433  233222 1   223578999


Q ss_pred             EEEccCChHHHHHHHHhhcCCCEEEEEccCCCC--cceechHhhhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceEE
Q 018075          255 SFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE--MTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITH  332 (361)
Q Consensus       255 vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~  332 (361)
                      +||+++........+++|+++|+++.+|.....  ..+....+..+++++.+.......++.++++++++++.+.+.+.+
T Consensus       230 v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  309 (334)
T cd08234         230 VIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFINPYTFPRAIALLESGKIDVKGLVSH  309 (334)
T ss_pred             EEECCCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccCHHHHHHHHHHHHcCCCChhhhEEE
Confidence            999998766889999999999999999865432  222223344577888887666677899999999999865555678


Q ss_pred             EecCChhhHHHHHHHHhcCCCceEEEE
Q 018075          333 RFGFTQKEIEDAFEISAQGGNAIKVMF  359 (361)
Q Consensus       333 ~~~l~~~~~~~a~~~l~~~~~~gkvvi  359 (361)
                      ++++  ++++++++.+.+ ...+|+|+
T Consensus       310 ~~~~--~~~~~a~~~~~~-~~~~k~vi  333 (334)
T cd08234         310 RLPL--EEVPEALEGMRS-GGALKVVV  333 (334)
T ss_pred             EecH--HHHHHHHHHHhc-CCceEEEe
Confidence            8888  999999999998 78889886

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=6.5e-39  Score=296.47  Aligned_cols=334  Identities=31%  Similarity=0.505  Sum_probs=274.0

Q ss_pred             eEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCC
Q 018075           16 MAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEV   94 (361)
Q Consensus        16 ~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   94 (361)
                      ++.++.++ .++++++.+.|.+.+++|+||+.++++|+.|+....|....   ...|.++|+|++|+|+++|+++..+++
T Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~~G~~~~~~~~   78 (345)
T cd08260           2 RAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPD---VTLPHVPGHEFAGVVVEVGEDVSRWRV   78 (345)
T ss_pred             eeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCC---CCCCeeeccceeEEEEEECCCCccCCC
Confidence            44444443 35899999999999999999999999999999887765421   355889999999999999999999999


Q ss_pred             CCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCC--ceEECCCCCCccccccc-chhHHHHHHH
Q 018075           95 GDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAK--LCYKLPDNVSLEEGAMC-EPLSVGVHAC  171 (361)
Q Consensus        95 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~vP~~~~~~~aa~~-~~~~~a~~~l  171 (361)
                      ||+|++.+...|++|.+|..|+.++|+++...+ ....|+|++|+.++..  .++++|+++++++++.+ ..+.+||+++
T Consensus        79 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l  157 (345)
T cd08260          79 GDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPG-FTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRAL  157 (345)
T ss_pred             CCEEEECCCCCCCCCccccCcCcccCCCCcccc-cCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHHHHH
Confidence            999998666789999999999999999874333 2247999999999974  89999999999888755 4788999998


Q ss_pred             H-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCC
Q 018075          172 R-RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       172 ~-~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (361)
                      . ..+++++++++|+|+|++|++++++|+..|+ .++++++++++.+.++++|++.++++.. ..++...+..+.   +.
T Consensus       158 ~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~-~~~~~~~~~~~~---~~  232 (345)
T cd08260         158 VHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNASE-VEDVAAAVRDLT---GG  232 (345)
T ss_pred             HHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEcccc-chhHHHHHHHHh---CC
Confidence            5 4789999999999999999999999999999 5788888899999999999988877532 134444444432   33


Q ss_pred             CccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC---cceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCC
Q 018075          251 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE---MTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDV  326 (361)
Q Consensus       251 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~  326 (361)
                      ++|++||++|+.......+++|+++|+++.+|.....   ..+....+..+++++.+.... .+.++.++++++++++.+
T Consensus       233 ~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~  312 (345)
T cd08260         233 GAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGMPAHRYDAMLALIASGKLDP  312 (345)
T ss_pred             CCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcCCHHHHHHHHHHHHcCCCCh
Confidence            8999999999766889999999999999999865432   233344455778888887554 567889999999999865


Q ss_pred             CCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075          327 KPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  360 (361)
Q Consensus       327 ~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~  360 (361)
                      .+.+.+.+++  +++++|++.+.++...+|+|++
T Consensus       313 ~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~v~~  344 (345)
T cd08260         313 EPLVGRTISL--DEAPDALAAMDDYATAGITVIT  344 (345)
T ss_pred             hhheeEEecH--HHHHHHHHHHHcCCCCceEEec
Confidence            5446688888  9999999999999999999875

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-39  Score=297.03  Aligned_cols=326  Identities=26%  Similarity=0.428  Sum_probs=269.1

Q ss_pred             ceEEEEeeCCc-eEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCC
Q 018075           15 NMAAWLLGIKT-LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE   93 (361)
Q Consensus        15 ~~~~~~~~~~~-l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   93 (361)
                      |+++++.+++. ++++++|.|.+.++|++|++.++++|++|+....|....   .++|.++|+|++|+|+++|++++.++
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~v~~~g~~~~~~~   77 (334)
T PRK13771          1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPR---MKYPVILGHEVVGTVEEVGENVKGFK   77 (334)
T ss_pred             CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCC---CCCCeeccccceEEEEEeCCCCccCC
Confidence            35666667765 999999999999999999999999999999877664321   25578999999999999999998899


Q ss_pred             CCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccc-hhHHHHHHHH
Q 018075           94 VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACR  172 (361)
Q Consensus        94 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-~~~~a~~~l~  172 (361)
                      +||+|++.+..+|+.|.+|+.|.+.+|+...+++. ...|+|++|+.++.+.++++|+++++.+++.+. .+.+||++++
T Consensus        78 ~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~  156 (334)
T PRK13771         78 PGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGE-ELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLR  156 (334)
T ss_pred             CCCEEEECCCCCCcCChhhcCCCcccCcccccccc-ccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHHH
Confidence            99999998778999999999999999999776653 357999999999999999999999998888554 7788999887


Q ss_pred             hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCC
Q 018075          173 RANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       173 ~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (361)
                      ...+++++++||+|+ |++|++++++|+.+|+ .++.+++++++.+.++++ ++.++++.    ++.+.+.+   .  .+
T Consensus       157 ~~~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~v~~---~--~~  225 (334)
T PRK13771        157 RAGVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGS----KFSEEVKK---I--GG  225 (334)
T ss_pred             hcCCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCch----hHHHHHHh---c--CC
Confidence            668899999999995 9999999999999999 578888888899988888 66554421    33333332   2  27


Q ss_pred             ccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCc--ceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCCC
Q 018075          252 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM--TVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKP  328 (361)
Q Consensus       252 ~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~  328 (361)
                      +|++||++|+. ....++++|+++|+++.+|......  .........++.++.+.... .++++.++++++++.+  ++
T Consensus       226 ~d~~ld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~  302 (334)
T PRK13771        226 ADIVIETVGTP-TLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISATKRDVEEALKLVAEGKI--KP  302 (334)
T ss_pred             CcEEEEcCChH-HHHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEecCCCHHHHHHHHHHHHcCCC--cc
Confidence            99999999976 7899999999999999998654321  23333445677888876543 5678899999999998  45


Q ss_pred             ceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075          329 LITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  360 (361)
Q Consensus       329 ~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~  360 (361)
                      .+.+.+++  +++++|++.+.++...+|++++
T Consensus       303 ~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~  332 (334)
T PRK13771        303 VIGAEVSL--SEIDKALEELKDKSRIGKILVK  332 (334)
T ss_pred             eEeeeEcH--HHHHHHHHHHHcCCCcceEEEe
Confidence            57788888  9999999999998888999886

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.6e-38  Score=293.43  Aligned_cols=333  Identities=28%  Similarity=0.459  Sum_probs=274.8

Q ss_pred             eEEEEeeCC--ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCC
Q 018075           16 MAAWLLGIK--TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE   93 (361)
Q Consensus        16 ~~~~~~~~~--~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   93 (361)
                      ++.++.+++  .+++++++.|.+.++|++|||.++++|++|+....|....  ....|.++|+|++|+|+++|++++.++
T Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~V~~vG~~~~~~~   79 (341)
T cd08297           2 KAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPV--KPKLPLIGGHEGAGVVVAVGPGVSGLK   79 (341)
T ss_pred             ceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCc--CCCCCccCCcccceEEEEeCCCCCCCC
Confidence            455665555  8999999999999999999999999999999887664321  134577899999999999999999999


Q ss_pred             CCCEEEecC-CcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHH
Q 018075           94 VGDRVALEP-GISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHAC  171 (361)
Q Consensus        94 ~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l  171 (361)
                      +||+|++.+ ...|+.|.++..++..+|+....++. ...|+|++|+.++.+.++++|+++++.+++.+ ..+.+||+++
T Consensus        80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~~  158 (341)
T cd08297          80 VGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGY-TVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKAL  158 (341)
T ss_pred             CCCEEEEecCCCCCCCCccccCCCcccCCCcccccc-ccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHHHH
Confidence            999999876 46799999999999999998766654 34789999999999999999999999988854 5788899998


Q ss_pred             HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCC
Q 018075          172 RRANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       172 ~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (361)
                      +..++++++++||+|+ +.+|++++++|+.+|+ .++.++.++++.+.++++|++.++++..  .++.+.+.+..  .++
T Consensus       159 ~~~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~~~~~~~~--~~~  233 (341)
T cd08297         159 KKAGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVDFKK--SDDVEAVKELT--GGG  233 (341)
T ss_pred             HhcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEcCCC--ccHHHHHHHHh--cCC
Confidence            7778999999999995 6799999999999999 6888888889999999999988777543  24444444332  357


Q ss_pred             CccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCc-ceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCCC
Q 018075          251 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM-TVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKP  328 (361)
Q Consensus       251 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~  328 (361)
                      ++|++||+.++.......+++++++|+++.+|...... ++....+..++.++.+.... .++++.++++++++.+.  +
T Consensus       234 ~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~  311 (341)
T cd08297         234 GAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVGTRQDLQEALEFAARGKVK--P  311 (341)
T ss_pred             CCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEeccCCHHHHHHHHHHHHcCCCc--c
Confidence            89999997776778999999999999999998655322 33334456788888875543 47789999999999984  3


Q ss_pred             ceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          329 LITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       329 ~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      .+ ..|++  ++++++++.+.++...||+++++
T Consensus       312 ~~-~~~~~--~~~~~a~~~~~~~~~~gkvvi~~  341 (341)
T cd08297         312 HI-QVVPL--EDLNEVFEKMEEGKIAGRVVVDF  341 (341)
T ss_pred             ee-EEEcH--HHHHHHHHHHHcCCccceEEEeC
Confidence            34 56788  99999999999999999999986

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08293 PTGR2 Prostaglandin reductase

Probab=100.00  E-value=5.3e-39  Score=297.05  Aligned_cols=298  Identities=18%  Similarity=0.239  Sum_probs=227.3

Q ss_pred             CceEEEEecCCCCC-CCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecC
Q 018075           24 KTLKIQPYHLPTLG-PQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEP  102 (361)
Q Consensus        24 ~~l~~~~~~~p~~~-~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~  102 (361)
                      +.+++++.|.|+|. ++||||||+|+|||+.|...............+|+++|+|++|+|+++|+++++|++||+|++. 
T Consensus        21 ~~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~-   99 (345)
T cd08293          21 ENFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSF-   99 (345)
T ss_pred             cceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEec-
Confidence            57999999999874 9999999999999999964332110001123567899999999999999999999999999851 


Q ss_pred             CcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccc-----ccccchhHHHHHHHHh-cCC
Q 018075          103 GISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEE-----GAMCEPLSVGVHACRR-ANV  176 (361)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~-----aa~~~~~~~a~~~l~~-~~~  176 (361)
                                                   .++|+||++++++.++++|+++++.+     +++..++.+||+++.. +++
T Consensus       100 -----------------------------~~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~  150 (345)
T cd08293         100 -----------------------------NWPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHI  150 (345)
T ss_pred             -----------------------------CCCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccC
Confidence                                         25799999999999999999864432     3344578899999854 778


Q ss_pred             CCC--CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH-cCCCEEeecCCCccchhHHHHHHHhhcCCCc
Q 018075          177 GPE--TNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       177 ~~g--~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      ++|  ++|||+|+ |++|++++|+|+.+|+..|+++++++++.+.+++ +|++.++++..  .++.+.++++   .++++
T Consensus       151 ~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~--~~~~~~i~~~---~~~gv  225 (345)
T cd08293         151 TPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKT--DNVAERLREL---CPEGV  225 (345)
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCC--CCHHHHHHHH---CCCCc
Confidence            877  99999995 9999999999999998568888888999888876 99999887543  4666666554   24689


Q ss_pred             cEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC---Ccc----eec--hHhh-hcCcEEEEeec--C----CCcHHHHH
Q 018075          253 DVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT---EMT----VAL--TPAA-AREVDVIGIFR--Y----RSTWPLCI  316 (361)
Q Consensus       253 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~---~~~----~~~--~~~~-~~~~~i~~~~~--~----~~~~~~~~  316 (361)
                      |++||++|+. .+..++++|+++|+++.+|....   ...    +..  ..+. .+++....+..  .    .+.+++++
T Consensus       226 d~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (345)
T cd08293         226 DVYFDNVGGE-ISDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLS  304 (345)
T ss_pred             eEEEECCCcH-HHHHHHHHhccCCEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHH
Confidence            9999999987 78999999999999999984321   111    110  1111 22333333221  1    23467788


Q ss_pred             HHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          317 EFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       317 ~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      +++++|++++  .....+++  +++++|++.+.+++..||+|+++
T Consensus       305 ~l~~~g~i~~--~~~~~~~l--~~~~~A~~~~~~~~~~gkvvl~~  345 (345)
T cd08293         305 QWVKEGKLKV--KETVYEGL--ENAGEAFQSMMNGGNIGKQIVKV  345 (345)
T ss_pred             HHHHCCCccc--eeEEeecH--HHHHHHHHHHhcCCCCCeEEEEC
Confidence            9999999943  34445677  99999999999998899999875

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=100.00  E-value=2.2e-38  Score=292.00  Aligned_cols=333  Identities=32%  Similarity=0.563  Sum_probs=275.4

Q ss_pred             ceEEEEeeCC-c-eEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCC
Q 018075           15 NMAAWLLGIK-T-LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL   92 (361)
Q Consensus        15 ~~~~~~~~~~-~-l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   92 (361)
                      |++.++..++ . +.+.+.+.|.+.+++|+|++.++++|+.|+....|...  .....|.++|+|++|+|+++|++++.+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~--~~~~~~~~~g~~~~G~v~~~G~~v~~~   78 (338)
T cd08254           1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVP--TLTKLPLTLGHEIAGTVVEVGAGVTNF   78 (338)
T ss_pred             CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCc--ccCCCCEeccccccEEEEEECCCCccC
Confidence            3555666543 3 58888889999999999999999999999988776542  123457799999999999999999999


Q ss_pred             CCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHH
Q 018075           93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHAC  171 (361)
Q Consensus        93 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l  171 (361)
                      ++||+|++.+..+|+.|.+|+.++..+|.+..+.+. ...|+|++|+.++.+.++++|+++++++++.+ .++.+||+++
T Consensus        79 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l  157 (338)
T cd08254          79 KVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGL-GIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAV  157 (338)
T ss_pred             CCCCEEEECCCCCCCCChhhhCcCcccCCCCCcccc-ccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHH
Confidence            999999999888999999999999999976544432 45799999999999999999999999888855 6889999998


Q ss_pred             Hh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCC
Q 018075          172 RR-ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       172 ~~-~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (361)
                      .. .+++++++|||.|+|++|++++++|+..|+ .+++++.++++.+.++++|++.++....  ......+   ....+.
T Consensus       158 ~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~~~--~~~~~~~---~~~~~~  231 (338)
T cd08254         158 VRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSLD--DSPKDKK---AAGLGG  231 (338)
T ss_pred             HhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCCC--cCHHHHH---HHhcCC
Confidence            65 679999999999889999999999999999 5888889999999999999987766432  3333333   222467


Q ss_pred             CccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCCCc
Q 018075          251 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPL  329 (361)
Q Consensus       251 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~  329 (361)
                      ++|++||++|....++.++++|+++|+++.+|.......+....+..++.++.+.+.. .+.+..++++++++.+.+.  
T Consensus       232 ~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~--  309 (338)
T cd08254         232 GFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLTVDLSDLIARELRIIGSFGGTPEDLPEVLDLIAKGKLDPQ--  309 (338)
T ss_pred             CceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCCCccCHHHHhhCccEEEEeccCCHHHHHHHHHHHHcCCCccc--
Confidence            8999999998777899999999999999999876544444555667788888876554 5678899999999998543  


Q ss_pred             eEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          330 ITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       330 ~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                       .+.+++  ++++++++.+.+++..+|+|++.
T Consensus       310 -~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~  338 (338)
T cd08254         310 -VETRPL--DEIPEVLERLHKGKVKGRVVLVP  338 (338)
T ss_pred             -ceeEcH--HHHHHHHHHHHcCCccceEEEeC
Confidence             467888  99999999999999999999864

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=100.00  E-value=1.9e-39  Score=290.96  Aligned_cols=260  Identities=24%  Similarity=0.424  Sum_probs=220.1

Q ss_pred             ccCcceeEEEEEeCCCCC------CCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCC------CCCCceeEEEE
Q 018075           73 VIGHECAGIIEEVGSEVK------SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP------PTNGSLAHKVV  140 (361)
Q Consensus        73 ~~G~e~~G~V~~vG~~v~------~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~~~~~~~  140 (361)
                      ++|||++|+|+++|++|+      ++++||||++.+..+|+.|.+|+.|+++.|++..+++..      ..+|+|+||++
T Consensus         1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~   80 (280)
T TIGR03366         1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH   80 (280)
T ss_pred             CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence            589999999999999999      899999999998889999999999999999987766531      24699999999


Q ss_pred             ecCC-ceEECCCCCCcccccccc-hhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH
Q 018075          141 HPAK-LCYKLPDNVSLEEGAMCE-PLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSI  218 (361)
Q Consensus       141 ~~~~-~~~~vP~~~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~  218 (361)
                      +++. .++++|+++++++|+.+. .+.++|+++++....+|++|||+|+|++|++++|+||.+|+++|++++.+++|.++
T Consensus        81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~  160 (280)
T TIGR03366        81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAAGDLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRREL  160 (280)
T ss_pred             ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence            9997 799999999999888664 66888999987777899999999999999999999999999768888889999999


Q ss_pred             HHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCC--CCcceechHhh
Q 018075          219 ARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK--TEMTVALTPAA  296 (361)
Q Consensus       219 ~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~--~~~~~~~~~~~  296 (361)
                      ++++|++.+++..    +..+.+.++.  .+.++|++||++|.+..++.++++++++|+++.+|...  ...+++...++
T Consensus       161 a~~~Ga~~~i~~~----~~~~~~~~~~--~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~~  234 (280)
T TIGR03366       161 ALSFGATALAEPE----VLAERQGGLQ--NGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQVV  234 (280)
T ss_pred             HHHcCCcEecCch----hhHHHHHHHh--CCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHHH
Confidence            9999998877642    1223333332  35689999999998878999999999999999999643  23355667788


Q ss_pred             hcCcEEEEeecC-CCcHHHHHHHHHcC--CCCCCCceEEEecCChhh
Q 018075          297 AREVDVIGIFRY-RSTWPLCIEFLRSG--KIDVKPLITHRFGFTQKE  340 (361)
Q Consensus       297 ~~~~~i~~~~~~-~~~~~~~~~~l~~g--~~~~~~~~~~~~~l~~~~  340 (361)
                      .+++++.|+..+ .++++++++++.++  ++++.+.++++|+|  ++
T Consensus       235 ~~~~~i~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l--~~  279 (280)
T TIGR03366       235 RRWLTIRGVHNYEPRHLDQAVRFLAANGQRFPFEELVGKPFPL--AD  279 (280)
T ss_pred             hCCcEEEecCCCCHHHHHHHHHHHHhhCCCCCHHHHhhccccc--cc
Confidence            999999998776 56899999999985  56666788888888  65

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=100.00  E-value=1e-38  Score=268.61  Aligned_cols=314  Identities=18%  Similarity=0.237  Sum_probs=245.8

Q ss_pred             ccCCcccceEEEEe---eC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEE
Q 018075            8 DEGDKNQNMAAWLL---GI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE   83 (361)
Q Consensus         8 ~~~~~~~~~~~~~~---~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~   83 (361)
                      ..+|+...++.++.   +| +.++++++++|+.+.++|+||..|+.|||+|+..++|.++  ..+++|.+.|+|++|+|+
T Consensus        13 a~q~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYp--vrP~~PAVgGnEGv~eVv   90 (354)
T KOG0025|consen   13 ASQMPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYP--VRPELPAVGGNEGVGEVV   90 (354)
T ss_pred             ccccccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccC--CCCCCCcccCCcceEEEE
Confidence            34455555666555   23 6799999999998888899999999999999999999763  336789999999999999


Q ss_pred             EeCCCCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccc-
Q 018075           84 EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-  162 (361)
Q Consensus        84 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-  162 (361)
                      .+|+++++|++||+|+..                           ....|+|++|.+.+++.++++++.++++.||++. 
T Consensus        91 ~vGs~vkgfk~Gd~VIp~---------------------------~a~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~V  143 (354)
T KOG0025|consen   91 AVGSNVKGFKPGDWVIPL---------------------------SANLGTWRTEAVFSESDLIKVDKDIPLASAATLSV  143 (354)
T ss_pred             EecCCcCccCCCCeEeec---------------------------CCCCccceeeEeecccceEEcCCcCChhhhheecc
Confidence            999999999999999863                           3357999999999999999999999999999875 


Q ss_pred             hhHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChh---HHHHHHHcCCCEEeecCCCccch
Q 018075          163 PLSVGVHACRR-ANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQ---RLSIARNLGADETAKVSTDIEDV  237 (361)
Q Consensus       163 ~~~~a~~~l~~-~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~---~~~~~~~lg~~~~~~~~~~~~~~  237 (361)
                      ..+|||.+|++ -++++||+|.-.|+ +++|++.||+||+.|...+=++...++   -.+.++.+||++++-..+- .+ 
T Consensus       144 NP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel-~~-  221 (354)
T KOG0025|consen  144 NPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEEL-RD-  221 (354)
T ss_pred             CchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHh-cc-
Confidence            67889999987 88999999888885 999999999999999965555533332   2344566899998752211 01 


Q ss_pred             hHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEc-cCCCCcceechHhhhcCcEEEEeecC--------
Q 018075          238 DTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG-LAKTEMTVALTPAAAREVDVIGIFRY--------  308 (361)
Q Consensus       238 ~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g-~~~~~~~~~~~~~~~~~~~i~~~~~~--------  308 (361)
                      .+..+.  .....++.+.|||+|+. ....+.+.|..||.++.+| ++-.+.+++.+.++|+.+.++|+|..        
T Consensus       222 ~~~~k~--~~~~~~prLalNcVGGk-sa~~iar~L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~  298 (354)
T KOG0025|consen  222 RKMKKF--KGDNPRPRLALNCVGGK-SATEIARYLERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKS  298 (354)
T ss_pred             hhhhhh--hccCCCceEEEeccCch-hHHHHHHHHhcCceEEEecCccCCCcccccchheeccceeeeeeeeehhhccCC
Confidence            111111  11245789999999988 7889999999999999998 66677788899999999999999864        


Q ss_pred             ----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHh-cCCCceEEEE
Q 018075          309 ----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISA-QGGNAIKVMF  359 (361)
Q Consensus       309 ----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~-~~~~~gkvvi  359 (361)
                          .+.+.++.++++.|++....  .+..+|  ++...|++... .-...||-+|
T Consensus       299 pe~~~~~i~~~~~l~~~G~i~~~~--~e~v~L--~~~~tald~~L~~~~~~~Kq~i  350 (354)
T KOG0025|consen  299 PEERKEMIDELCDLYRRGKLKAPN--CEKVPL--ADHKTALDAALSKFGKSGKQII  350 (354)
T ss_pred             cHHHHHHHHHHHHHHHcCeecccc--ceeeec--hhhhHHHHHHHHHhccCCceEE
Confidence                13467899999999995443  334567  77777777533 3333345544

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=100.00  E-value=1.7e-38  Score=292.80  Aligned_cols=295  Identities=19%  Similarity=0.208  Sum_probs=235.7

Q ss_pred             CceEEEEecC----CCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcce--eEEEEEeCCCCCCCCCCCE
Q 018075           24 KTLKIQPYHL----PTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHEC--AGIIEEVGSEVKSLEVGDR   97 (361)
Q Consensus        24 ~~l~~~~~~~----p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~--~G~V~~vG~~v~~~~~Gd~   97 (361)
                      +.|++++.++    |+|+++||||||+|+|+|+.|++...|....  ....|+++|+++  .|++..+|+++++|++||+
T Consensus        19 ~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~--~~~~p~~~g~~~~g~~~~~~v~~~v~~~~vGd~   96 (338)
T cd08295          19 SDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDS--LYLPPFKPGEVITGYGVAKVVDSGNPDFKVGDL   96 (338)
T ss_pred             cceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCcc--ccCCCcCCCCeEeccEEEEEEecCCCCCCCCCE
Confidence            5799999877    8899999999999999999999988764211  124578899754  4566668899999999999


Q ss_pred             EEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecC-CceEECC-CCCCcc-ccc-ccchhHHHHHHHHh
Q 018075           98 VALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPA-KLCYKLP-DNVSLE-EGA-MCEPLSVGVHACRR  173 (361)
Q Consensus        98 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~vP-~~~~~~-~aa-~~~~~~~a~~~l~~  173 (361)
                      |+.                               .|+|+||+++++ ..++++| +++++. +++ +..++.+||+++..
T Consensus        97 V~~-------------------------------~g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~  145 (338)
T cd08295          97 VWG-------------------------------FTGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYE  145 (338)
T ss_pred             EEe-------------------------------cCCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHH
Confidence            985                               368999999999 7999995 568875 565 44588999999865


Q ss_pred             -cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH-cCCCEEeecCCCccchhHHHHHHHhhcCC
Q 018075          174 -ANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       174 -~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (361)
                       .++++|++|||+|+ |++|++++|+|+.+|+ .++++++++++.+++++ +|++.++++.. ..++.+.+.+.   .+.
T Consensus       146 ~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~-~~~~~~~i~~~---~~~  220 (338)
T cd08295         146 VCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDLLKNKLGFDDAFNYKE-EPDLDAALKRY---FPN  220 (338)
T ss_pred             hcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhcCCceeEEcCC-cccHHHHHHHh---CCC
Confidence             88999999999995 9999999999999999 58888888999999988 99998887532 23555555443   246


Q ss_pred             CccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCc------ceechHhhhcCcEEEEeecC------CCcHHHHHHH
Q 018075          251 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM------TVALTPAAAREVDVIGIFRY------RSTWPLCIEF  318 (361)
Q Consensus       251 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~------~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~  318 (361)
                      ++|++||++|+. .+..++++|+++|+++.+|......      ..+...+.++++++.++...      .+.+++++++
T Consensus       221 gvd~v~d~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l  299 (338)
T cd08295         221 GIDIYFDNVGGK-MLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGY  299 (338)
T ss_pred             CcEEEEECCCHH-HHHHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHHHH
Confidence            899999999975 8999999999999999998543311      12234566778888875432      2347788999


Q ss_pred             HHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          319 LRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       319 l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      +++|++++  .+...|++  +++++|++.+.+++..||+|+++
T Consensus       300 ~~~g~l~~--~~~~~~~l--~~~~~A~~~~~~~~~~GkvVl~~  338 (338)
T cd08295         300 IKEGKLKY--VEDIADGL--ESAPEAFVGLFTGSNIGKQVVKV  338 (338)
T ss_pred             HHCCCeEc--eeecccCH--HHHHHHHHHHhcCCCCceEEEEC
Confidence            99999944  34455778  99999999999998999999975

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=100.00  E-value=1.7e-38  Score=291.24  Aligned_cols=289  Identities=19%  Similarity=0.227  Sum_probs=232.0

Q ss_pred             eCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEec
Q 018075           22 GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALE  101 (361)
Q Consensus        22 ~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~  101 (361)
                      +++.+++++.|.|+|++|||||||.|+|+|+.+..   |...   ....|.++|.|++|+|+++|+   .|++||||++ 
T Consensus        15 ~~~~l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~---~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~-   84 (325)
T TIGR02825        15 TDSDFELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKR---LKEGDTMMGQQVARVVESKNV---ALPKGTIVLA-   84 (325)
T ss_pred             CCCceEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCc---CCCCCcEecceEEEEEEeCCC---CCCCCCEEEE-
Confidence            45779999999999999999999999999997654   3211   123478999999999999874   5999999985 


Q ss_pred             CCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEEC----CCCCCcccc-cc-cchhHHHHHHHH-hc
Q 018075          102 PGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKL----PDNVSLEEG-AM-CEPLSVGVHACR-RA  174 (361)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v----P~~~~~~~a-a~-~~~~~~a~~~l~-~~  174 (361)
                                                    .++|++|+.++.+.+.++    |+++++++| +. ..++.|||+++. .+
T Consensus        85 ------------------------------~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~  134 (325)
T TIGR02825        85 ------------------------------SPGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEIC  134 (325)
T ss_pred             ------------------------------ecCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHh
Confidence                                          246999999999988888    899999886 44 457899999984 58


Q ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCcc
Q 018075          175 NVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       175 ~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      ++++|++|||+| +|++|++++|+||..|+ .++++++++++.++++++|++.++++... .++.+.++..   .++++|
T Consensus       135 ~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~-~~~~~~~~~~---~~~gvd  209 (325)
T TIGR02825       135 GVKGGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKTV-KSLEETLKKA---SPDGYD  209 (325)
T ss_pred             CCCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEecccc-ccHHHHHHHh---CCCCeE
Confidence            899999999998 69999999999999999 68888889999999999999998876431 2344444333   356899


Q ss_pred             EEEEccCChHHHHHHHHhhcCCCEEEEEccCCC-----Ccc--eechHhhhcCcEEEEeecC-------CCcHHHHHHHH
Q 018075          254 VSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-----EMT--VALTPAAAREVDVIGIFRY-------RSTWPLCIEFL  319 (361)
Q Consensus       254 ~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-----~~~--~~~~~~~~~~~~i~~~~~~-------~~~~~~~~~~l  319 (361)
                      ++||++|++ .++.++++|+++|+++.+|....     ...  .....+.++.+++.++...       .+.++++++++
T Consensus       210 vv~d~~G~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~  288 (325)
T TIGR02825       210 CYFDNVGGE-FSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWV  288 (325)
T ss_pred             EEEECCCHH-HHHHHHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHH
Confidence            999999976 78999999999999999985432     111  1233466778888876532       24678899999


Q ss_pred             HcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075          320 RSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  360 (361)
Q Consensus       320 ~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~  360 (361)
                      ++|++.+.  ....|+|  +++++|++.+++++..||+|++
T Consensus       289 ~~g~l~~~--~~~~~~l--~~~~~A~~~~~~~~~~gkvVv~  325 (325)
T TIGR02825       289 LEGKIQYK--EYVIEGF--ENMPAAFMGMLKGENLGKTIVK  325 (325)
T ss_pred             HCCCcccc--eeccccH--HHHHHHHHHHhcCCCCCeEEeC
Confidence            99999543  4456788  9999999999999999999974

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.3e-37  Score=286.15  Aligned_cols=326  Identities=33%  Similarity=0.534  Sum_probs=267.2

Q ss_pred             eEEEEee-CCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCC
Q 018075           16 MAAWLLG-IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEV   94 (361)
Q Consensus        16 ~~~~~~~-~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   94 (361)
                      ++.++.. ++.+.++++|.|.+.+++|+|+|+++++|++|++...|....   ...|.++|+|++|+|+++|++++.+++
T Consensus         2 ~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~v~~~G~~v~~~~~   78 (332)
T cd08259           2 KAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPR---GKYPLILGHEIVGTVEEVGEGVERFKP   78 (332)
T ss_pred             eEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCC---CCCCeeccccceEEEEEECCCCccCCC
Confidence            4555554 578999999999999999999999999999999887764321   245789999999999999999999999


Q ss_pred             CCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHHHh
Q 018075           95 GDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRR  173 (361)
Q Consensus        95 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l~~  173 (361)
                      ||+|++.+...|+.|.+|..+.+..|+....++ ....|+|++|+.++.+.++++|+++++++++.+ ..+.+||++++.
T Consensus        79 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~  157 (332)
T cd08259          79 GDRVILYYYIPCGKCEYCLSGEENLCRNRAEYG-EEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALKR  157 (332)
T ss_pred             CCEEEECCCCCCcCChhhhCCCcccCCCccccc-cccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHHHHH
Confidence            999999888899999999999999999864444 345799999999999999999999999888755 578889999877


Q ss_pred             cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCc
Q 018075          174 ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       174 ~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      ..+++++++||+| +|++|++++++++..|+ .++.+.+++++.+.+++++.+.+++..    ++.+.+.+.     .++
T Consensus       158 ~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-----~~~  227 (332)
T cd08259         158 AGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGS----KFSEDVKKL-----GGA  227 (332)
T ss_pred             hCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEecH----HHHHHHHhc-----cCC
Confidence            8899999999998 59999999999999999 567777888888888889987665432    133333322     279


Q ss_pred             cEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcc-eechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCCCce
Q 018075          253 DVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMT-VALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLI  330 (361)
Q Consensus       253 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~  330 (361)
                      |++++++|.. .....+++++++|+++.++....... +.......++..+.+.... .++++++++++++|.+  .+.+
T Consensus       228 d~v~~~~g~~-~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~  304 (332)
T cd08259         228 DVVIELVGSP-TIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISATKADVEEALKLVKEGKI--KPVI  304 (332)
T ss_pred             CEEEECCChH-HHHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcCCC--ccce
Confidence            9999999976 78899999999999999986543211 2233344567777766543 5678889999999998  4557


Q ss_pred             EEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075          331 THRFGFTQKEIEDAFEISAQGGNAIKVMFN  360 (361)
Q Consensus       331 ~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~  360 (361)
                      .+.+++  +++++|++.+.+++..+|++++
T Consensus       305 ~~~~~~--~~~~~a~~~~~~~~~~~kvv~~  332 (332)
T cd08259         305 DRVVSL--EDINEALEDLKSGKVVGRIVLK  332 (332)
T ss_pred             eEEEcH--HHHHHHHHHHHcCCcccEEEeC
Confidence            788888  9999999999999888999875

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.1e-37  Score=286.45  Aligned_cols=319  Identities=25%  Similarity=0.390  Sum_probs=262.3

Q ss_pred             eEEEEeeCC-----ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCC
Q 018075           16 MAAWLLGIK-----TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVK   90 (361)
Q Consensus        16 ~~~~~~~~~-----~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   90 (361)
                      ++.++.+++     .+++++.+.|.+.++||+||+.++++|++|+....|....   ...|.++|+|++|+|+++|+++.
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~---~~~~~~~g~e~~G~V~~vG~~v~   78 (329)
T cd08298           2 KAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPP---PKLPLIPGHEIVGRVEAVGPGVT   78 (329)
T ss_pred             eEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCC---CCCCccccccccEEEEEECCCCC
Confidence            445555554     6889999888899999999999999999999887764321   35578999999999999999999


Q ss_pred             CCCCCCEEEecCC-cCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHH
Q 018075           91 SLEVGDRVALEPG-ISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGV  168 (361)
Q Consensus        91 ~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~  168 (361)
                      ++++||+|++.+. .+|+.|.+|+.+.+++|+.+.+++. ...|+|++|+.++.+.++++|+++++.+++.+ .++.+||
T Consensus        79 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~  157 (329)
T cd08298          79 RFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGY-TVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGY  157 (329)
T ss_pred             CCcCCCEEEEeccCCCCCCChhHhCcChhhCCCcccccc-ccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHH
Confidence            9999999987544 5789999999999999999887764 34799999999999999999999999888744 5788899


Q ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhc
Q 018075          169 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       169 ~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      ++++.+++++++++||+|+|++|++++++++..|+ .++.++.++++.+.++++|++..++....              .
T Consensus       158 ~~~~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~--------------~  222 (329)
T cd08298         158 RALKLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADWAGDSDDL--------------P  222 (329)
T ss_pred             HHHHhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEeccCcc--------------C
Confidence            99966899999999999999999999999999999 67888888899999999999776654221              1


Q ss_pred             CCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCc-ceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCC
Q 018075          249 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM-TVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDV  326 (361)
Q Consensus       249 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~  326 (361)
                      +.++|+++++.+...+++.++++|+++|+++.+|...... .++.. ....+..+.+.... .+.++.++++++++.+. 
T Consensus       223 ~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~l~-  300 (329)
T cd08298         223 PEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMSDIPAFDYE-LLWGEKTIRSVANLTRQDGEEFLKLAAEIPIK-  300 (329)
T ss_pred             CCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCCCCCccchh-hhhCceEEEEecCCCHHHHHHHHHHHHcCCCC-
Confidence            3579999998766678999999999999999988543211 11222 23456667666544 45688899999999884 


Q ss_pred             CCceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 018075          327 KPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF  359 (361)
Q Consensus       327 ~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi  359 (361)
                       +. .+.|++  +++++|++.+++++..||+++
T Consensus       301 -~~-~~~~~~--~~~~~a~~~~~~~~~~~~~v~  329 (329)
T cd08298         301 -PE-VETYPL--EEANEALQDLKEGRIRGAAVL  329 (329)
T ss_pred             -ce-EEEEeH--HHHHHHHHHHHcCCCcceeeC
Confidence             33 578888  999999999999999999874

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=100.00  E-value=1.1e-37  Score=285.78  Aligned_cols=305  Identities=23%  Similarity=0.265  Sum_probs=246.0

Q ss_pred             eEEEEeeCC----ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCC
Q 018075           16 MAAWLLGIK----TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS   91 (361)
Q Consensus        16 ~~~~~~~~~----~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   91 (361)
                      +++++.+++    .++++++|.|.+.++||+|||.++++|++|++...|....  ....|.++|||++|+|+++|++++.
T Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~--~~~~p~~~G~e~~G~V~~~G~~v~~   79 (324)
T cd08292           2 RAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGY--KPELPAIGGSEAVGVVDAVGEGVKG   79 (324)
T ss_pred             eeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCC--CCCCCCCCCcceEEEEEEeCCCCCC
Confidence            455555443    4889999999999999999999999999999888765321  1345789999999999999999999


Q ss_pred             CCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccc-hhHHHHHH
Q 018075           92 LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHA  170 (361)
Q Consensus        92 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-~~~~a~~~  170 (361)
                      +++||+|++.                            ...|+|++|+.+++..++++|+++++++++.+. ...+||++
T Consensus        80 ~~~Gd~V~~~----------------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~  131 (324)
T cd08292          80 LQVGQRVAVA----------------------------PVHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALML  131 (324)
T ss_pred             CCCCCEEEec----------------------------cCCCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHH
Confidence            9999999863                            126899999999999999999999999888653 56778888


Q ss_pred             HHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcC
Q 018075          171 CRRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      ++..++++|++|||+| +|.+|++++|+|+.+|+ .++.+..++++.+.++++|++.+++..  ..++.+.+.++.  .+
T Consensus       132 ~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~i~~~~--~~  206 (324)
T cd08292         132 LDFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVVSTE--QPGWQDKVREAA--GG  206 (324)
T ss_pred             HHhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEEcCC--CchHHHHHHHHh--CC
Confidence            8778899999999998 59999999999999999 566666777777777889988777643  345555555443  45


Q ss_pred             CCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC-CcceechHhhhcCcEEEEeecC-----------CCcHHHHHH
Q 018075          250 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRY-----------RSTWPLCIE  317 (361)
Q Consensus       250 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-----------~~~~~~~~~  317 (361)
                      .++|++||++|+. .....+++|+++|+++.+|.... ...+.......++.++.++...           .+.+.++++
T Consensus       207 ~~~d~v~d~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (324)
T cd08292         207 APISVALDSVGGK-LAGELLSLLGEGGTLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLT  285 (324)
T ss_pred             CCCcEEEECCCCh-hHHHHHHhhcCCcEEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHH
Confidence            7899999999986 78999999999999999986532 2233344456788888887643           235788999


Q ss_pred             HHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075          318 FLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  360 (361)
Q Consensus       318 ~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~  360 (361)
                      ++++|.+.+  .+.+.|++  +++++|++.+.++...+|++++
T Consensus       286 l~~~g~i~~--~~~~~~~~--~~~~~a~~~~~~~~~~~kvvv~  324 (324)
T cd08292         286 LALKGQLLL--PVEAVFDL--GDAAKAAAASMRPGRAGKVLLR  324 (324)
T ss_pred             HHHCCCccC--ccccEecH--HHHHHHHHHHHcCCCCceEEeC
Confidence            999999953  34677888  9999999999988888999874

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=100.00  E-value=7.6e-38  Score=287.42  Aligned_cols=287  Identities=21%  Similarity=0.259  Sum_probs=231.0

Q ss_pred             CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCC
Q 018075           24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPG  103 (361)
Q Consensus        24 ~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~  103 (361)
                      +.+++++.+.|+|+++||+|||+++|+|+.|.....      .....|.++|+|++|+|++   .+++|++||||+.   
T Consensus        19 ~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~------~~~~~p~v~G~e~~G~V~~---~~~~~~~Gd~V~~---   86 (329)
T cd08294          19 SDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSK------RLNEGDTMIGTQVAKVIES---KNSKFPVGTIVVA---   86 (329)
T ss_pred             cceEEEecCCCCCCCCcEEEEEEEEecCHHHhcccc------cCCCCCcEecceEEEEEec---CCCCCCCCCEEEe---
Confidence            568999999999999999999999999988765221      1124588999999999995   4567999999985   


Q ss_pred             cCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCC---ceEECCCCCC------cccccccchhHHHHHHHH-h
Q 018075          104 ISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAK---LCYKLPDNVS------LEEGAMCEPLSVGVHACR-R  173 (361)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~vP~~~~------~~~aa~~~~~~~a~~~l~-~  173 (361)
                                                  .++|++|+.++.+   .++++|++++      ...++...++.+||+++. .
T Consensus        87 ----------------------------~~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~  138 (329)
T cd08294          87 ----------------------------SFGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEI  138 (329)
T ss_pred             ----------------------------eCCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHh
Confidence                                        3579999999999   9999999988      222334468899999985 4


Q ss_pred             cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCc
Q 018075          174 ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       174 ~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      .++++|++|||+| +|++|++++|+|+..|+ .++++++++++.++++++|++.++++..  .++.+.++++   .++++
T Consensus       139 ~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~~l~~~Ga~~vi~~~~--~~~~~~v~~~---~~~gv  212 (329)
T cd08294         139 CKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVAWLKELGFDAVFNYKT--VSLEEALKEA---APDGI  212 (329)
T ss_pred             cCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCC--ccHHHHHHHH---CCCCc
Confidence            8899999999998 69999999999999999 5888889999999999999999887543  4555555443   34689


Q ss_pred             cEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC--c-----ceechHhhhcCcEEEEeecC------CCcHHHHHHHH
Q 018075          253 DVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE--M-----TVALTPAAAREVDVIGIFRY------RSTWPLCIEFL  319 (361)
Q Consensus       253 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~-----~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~l  319 (361)
                      |++||++|+. .+..++++++++|+++.+|.....  .     ......+.++++++.++...      .+.++++++++
T Consensus       213 d~vld~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~  291 (329)
T cd08294         213 DCYFDNVGGE-FSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWI  291 (329)
T ss_pred             EEEEECCCHH-HHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHH
Confidence            9999999975 899999999999999999853211  0     12233567788888886543      23467889999


Q ss_pred             HcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          320 RSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       320 ~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      ++|.+++.  ....+++  +++++|++.+.+++..||+|+++
T Consensus       292 ~~g~i~~~--~~~~~~l--~~~~~A~~~~~~~~~~gkvvv~~  329 (329)
T cd08294         292 KEGKLKYR--EHVTEGF--ENMPQAFIGMLKGENTGKAIVKV  329 (329)
T ss_pred             HCCCCcCC--cccccCH--HHHHHHHHHHHcCCCCCeEEEeC
Confidence            99999543  3345778  99999999999999999999875

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.3e-36  Score=280.19  Aligned_cols=333  Identities=28%  Similarity=0.459  Sum_probs=269.9

Q ss_pred             eEEEEe---eCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCC
Q 018075           16 MAAWLL---GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL   92 (361)
Q Consensus        16 ~~~~~~---~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   92 (361)
                      +++++.   .+..+++++.+.|++.+++|+|++.++++|++|+....|...  .....|.++|||++|+|+++|++++.+
T Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~--~~~~~~~~~g~e~~G~v~~~G~~~~~~   79 (342)
T cd08266           2 KAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPG--IKLPLPHILGSDGAGVVEAVGPGVTNV   79 (342)
T ss_pred             eEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCC--CCCCCCeecccceEEEEEEeCCCCCCC
Confidence            455666   446788989888889999999999999999999988776432  113457899999999999999999999


Q ss_pred             CCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccc-hhHHHHHHH
Q 018075           93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC  171 (361)
Q Consensus        93 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-~~~~a~~~l  171 (361)
                      ++||+|++.+..+|+.|.+|..+.++.|+...+++. ...|+|++|+.++.+.++++|+++++++++.+. .+.+|++++
T Consensus        80 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l  158 (342)
T cd08266          80 KPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGE-HVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHML  158 (342)
T ss_pred             CCCCEEEEccccccccchhhcccccccccccccccc-ccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHHH
Confidence            999999999999999999999999999998766553 357899999999999999999999998887654 678888887


Q ss_pred             H-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcC
Q 018075          172 R-RANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       172 ~-~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      . ..+++++++++|+|+ +++|++++++++..|+ .++.++.++++.+.+++++.+.+++.  ...++.+.+.+..  .+
T Consensus       159 ~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~  233 (342)
T cd08266         159 VTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVIDY--RKEDFVREVRELT--GK  233 (342)
T ss_pred             HHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEEec--CChHHHHHHHHHh--CC
Confidence            5 488999999999985 7999999999999999 57778888888888888887766543  2233434433322  24


Q ss_pred             CCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC-cceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCC
Q 018075          250 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVK  327 (361)
Q Consensus       250 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~  327 (361)
                      .++|++++++|.. .+...+++++++|+++.++..... ........+.++.++.+.... ...+..++++++++.+  .
T Consensus       234 ~~~d~~i~~~g~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l--~  310 (342)
T cd08266         234 RGVDVVVEHVGAA-TWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGTKAELDEALRLVFRGKL--K  310 (342)
T ss_pred             CCCcEEEECCcHH-HHHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEecCCHHHHHHHHHHHHcCCc--c
Confidence            5799999999975 889999999999999999855432 222333445677777776554 4578889999999988  4


Q ss_pred             CceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          328 PLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       328 ~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      +.+++.|++  ++++++++.+.++...+|++++.
T Consensus       311 ~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~  342 (342)
T cd08266         311 PVIDSVFPL--EEAAEAHRRLESREQFGKIVLTP  342 (342)
T ss_pred             cceeeeEcH--HHHHHHHHHHHhCCCCceEEEeC
Confidence            557788888  99999999999888889999863

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=4.7e-37  Score=281.71  Aligned_cols=317  Identities=26%  Similarity=0.428  Sum_probs=254.8

Q ss_pred             eEEEEeeC--CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCC
Q 018075           16 MAAWLLGI--KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE   93 (361)
Q Consensus        16 ~~~~~~~~--~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   93 (361)
                      ++.++.++  +.+++++.+.|+++++||+||+.++++|++|++...+..    ....|.++|||++|+|+++|++++.++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~~----~~~~~~~~g~e~~G~v~~vG~~v~~~~   77 (325)
T cd08264           2 KALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVK----VKPMPHIPGAEFAGVVEEVGDHVKGVK   77 (325)
T ss_pred             eeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCCC----CCCCCeecccceeEEEEEECCCCCCCC
Confidence            44555443  578899998888999999999999999999998765321    123477899999999999999999999


Q ss_pred             CCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccc-hhHHHHHHHH
Q 018075           94 VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACR  172 (361)
Q Consensus        94 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-~~~~a~~~l~  172 (361)
                      +||+|++.+...|++|.+|+.|+.++|++..+.+. ...|+|++|+.++++.++++|+++++++++.+. .+.+||++++
T Consensus        78 ~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~  156 (325)
T cd08264          78 KGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGV-VSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALK  156 (325)
T ss_pred             CCCEEEECCCcCCCCChhhcCCCccccCccceeec-cCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHHH
Confidence            99999998888999999999999999998766543 357999999999999999999999998888554 6788999987


Q ss_pred             hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCC
Q 018075          173 RANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       173 ~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (361)
                      ..++++|++|+|+|+ |++|++++++|+.+|++ ++.++    +.+.++++|++.+++..    +..+.+.++   . ++
T Consensus       157 ~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~-v~~~~----~~~~~~~~g~~~~~~~~----~~~~~l~~~---~-~~  223 (325)
T cd08264         157 TAGLGPGETVVVFGASGNTGIFAVQLAKMMGAE-VIAVS----RKDWLKEFGADEVVDYD----EVEEKVKEI---T-KM  223 (325)
T ss_pred             hcCCCCCCEEEEECCCchHHHHHHHHHHHcCCe-EEEEe----HHHHHHHhCCCeeecch----HHHHHHHHH---h-CC
Confidence            788999999999995 99999999999999995 66664    23677889988776532    122333333   2 67


Q ss_pred             ccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC-CcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCCCc
Q 018075          252 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPL  329 (361)
Q Consensus       252 ~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~  329 (361)
                      +|++||++|+. .++..+++|+++|+++.+|.... ...++...+..++.++.+...+ ++.++.+++++...+    ..
T Consensus       224 ~d~vl~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~  298 (325)
T cd08264         224 ADVVINSLGSS-FWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGGTRKELLELVKIAKDLK----VK  298 (325)
T ss_pred             CCEEEECCCHH-HHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEEccCCCHHHHHHHHHHHHcCC----ce
Confidence            99999999975 89999999999999999986422 2344455566677788776544 567888999996433    33


Q ss_pred             eEEEecCChhhHHHHHHHHhcCCCceEE
Q 018075          330 ITHRFGFTQKEIEDAFEISAQGGNAIKV  357 (361)
Q Consensus       330 ~~~~~~l~~~~~~~a~~~l~~~~~~gkv  357 (361)
                      +.+.|++  +++++|++.+.++...+|+
T Consensus       299 ~~~~~~~--~~~~~a~~~~~~~~~~~kv  324 (325)
T cd08264         299 VWKTFKL--EEAKEALKELFSKERDGRI  324 (325)
T ss_pred             eEEEEcH--HHHHHHHHHHHcCCCcccc
Confidence            5677888  9999999999988777775

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.1e-36  Score=282.06  Aligned_cols=323  Identities=24%  Similarity=0.342  Sum_probs=250.9

Q ss_pred             eEEEEeeC---CceEEEE-ecCCCCCCCcEEEEEeeeecCcchhhhhcccccc-----------------cccCCCCccc
Q 018075           16 MAAWLLGI---KTLKIQP-YHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCA-----------------NFIVKKPMVI   74 (361)
Q Consensus        16 ~~~~~~~~---~~l~~~~-~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~-----------------~~~~~~p~~~   74 (361)
                      +++++.++   +.+.+.+ .+.|.+.+++|+|||.++++|++|++...|....                 ....+.|.++
T Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~   81 (350)
T cd08274           2 RAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRIQ   81 (350)
T ss_pred             eEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCccc
Confidence            44555543   3566654 5777789999999999999999999887664310                 0123568899


Q ss_pred             CcceeEEEEEeCCCCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCC
Q 018075           75 GHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVS  154 (361)
Q Consensus        75 G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~  154 (361)
                      |||++|+|+++|+++++|++||+|++.+...|+.|..|.        .+.+.+. ..+|+|++|+.++.+.++++|++++
T Consensus        82 G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~--------~~~~~~~-~~~g~~~~~~~v~~~~~~~ip~~~~  152 (350)
T cd08274          82 GADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPA--------DIDYIGS-ERDGGFAEYTVVPAENAYPVNSPLS  152 (350)
T ss_pred             CCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccc--------cccccCC-CCCccceEEEEecHHHceeCCCCCC
Confidence            999999999999999999999999987766666665432        1222221 2369999999999999999999999


Q ss_pred             ccccccc-chhHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCC
Q 018075          155 LEEGAMC-EPLSVGVHACRRANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST  232 (361)
Q Consensus       155 ~~~aa~~-~~~~~a~~~l~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~  232 (361)
                      +.+++.+ .++.+||++++..++++|++|||+|+ |++|++++++|+.+|++ ++.++.++ +.+.++++|++.+.+.  
T Consensus       153 ~~~~a~l~~~~~ta~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~-vi~~~~~~-~~~~~~~~g~~~~~~~--  228 (350)
T cd08274         153 DVELATFPCSYSTAENMLERAGVGAGETVLVTGASGGVGSALVQLAKRRGAI-VIAVAGAA-KEEAVRALGADTVILR--  228 (350)
T ss_pred             HHHHHhcccHHHHHHHHHhhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCE-EEEEeCch-hhHHHHhcCCeEEEeC--
Confidence            9887755 57888999887788999999999995 99999999999999995 66666555 7888899998754432  


Q ss_pred             CccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC-cceechHhhhcCcEEEEeecC-CC
Q 018075          233 DIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY-RS  310 (361)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-~~  310 (361)
                      ......+ .   ..+.+.++|++||++|+. .++.++++++++|+++.+|..... ..++...++.++.++.++... .+
T Consensus       229 ~~~~~~~-~---~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (350)
T cd08274         229 DAPLLAD-A---KALGGEPVDVVADVVGGP-LFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTLGTRE  303 (350)
T ss_pred             CCccHHH-H---HhhCCCCCcEEEecCCHH-HHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEeecCCHH
Confidence            2222222 1   222467899999999975 899999999999999999855332 234444556788888887665 56


Q ss_pred             cHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075          311 TWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  360 (361)
Q Consensus       311 ~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~  360 (361)
                      .+.+++++++++++  .+.+.+.+++  ++++++++.+.++...+|++++
T Consensus       304 ~~~~~~~l~~~~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvvi~  349 (350)
T cd08274         304 VFRRLVRYIEEGEI--RPVVAKTFPL--SEIREAQAEFLEKRHVGKLVLV  349 (350)
T ss_pred             HHHHHHHHHHCCCc--ccccccccCH--HHHHHHHHHHhcCCCceEEEEe
Confidence            78899999999998  4456677888  9999999999998889999986

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=100.00  E-value=3.3e-36  Score=276.69  Aligned_cols=325  Identities=28%  Similarity=0.438  Sum_probs=266.1

Q ss_pred             eEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCC
Q 018075           16 MAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEV   94 (361)
Q Consensus        16 ~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   94 (361)
                      +++++.++ +.+.+++.|.|.+.+++|+|++.++++|++|+....|....   ...|.++|+|++|+|+++|++++++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~---~~~p~~~g~e~~G~v~~~g~~~~~~~~   77 (330)
T cd08245           1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGG---SKYPLVPGHEIVGEVVEVGAGVEGRKV   77 (330)
T ss_pred             CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCC---CCCCcccCccceEEEEEECCCCccccc
Confidence            35666666 68999999999999999999999999999999887765421   345789999999999999999999999


Q ss_pred             CCEEEecCC-cCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHHH
Q 018075           95 GDRVALEPG-ISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACR  172 (361)
Q Consensus        95 Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l~  172 (361)
                      ||+|+..+. .+|+.|.+|..+.+++|++.-+.+. ...|+|++|+.++.+.++++|+++++++++.+ ..+.+||++++
T Consensus        78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~  156 (330)
T cd08245          78 GDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGY-TTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALR  156 (330)
T ss_pred             CCEEEEccccCCCCCChhhhCcCcccCcCccccCc-ccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHH
Confidence            999987554 5799999999999999998654442 24689999999999999999999999988854 56788999887


Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCc
Q 018075          173 RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       173 ~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      ...++++++|||+|+|++|++++++|+..|. .++++++++++.+.++++|++.+++...  .+....       ...++
T Consensus       157 ~~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~-------~~~~~  226 (330)
T cd08245         157 DAGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSGA--ELDEQA-------AAGGA  226 (330)
T ss_pred             hhCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccCC--cchHHh-------ccCCC
Confidence            7889999999999988899999999999999 5788888899999999999887765432  122111       13579


Q ss_pred             cEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcc-eechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCCCce
Q 018075          253 DVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMT-VALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLI  330 (361)
Q Consensus       253 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~  330 (361)
                      |+++|+++.......++++|+++|+++.++....... .....+..++.++.+.... ...++.++++++++.+.  + .
T Consensus       227 d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~--~-~  303 (330)
T cd08245         227 DVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGGRADLQEALDFAAEGKVK--P-M  303 (330)
T ss_pred             CEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEeccCCHHHHHHHHHHHHcCCCc--c-e
Confidence            9999998876688999999999999999986433212 2133466777888777654 56788899999999984  3 3


Q ss_pred             EEEecCChhhHHHHHHHHhcCCCceEEEE
Q 018075          331 THRFGFTQKEIEDAFEISAQGGNAIKVMF  359 (361)
Q Consensus       331 ~~~~~l~~~~~~~a~~~l~~~~~~gkvvi  359 (361)
                      .+.+++  ++++++++.+.+++..+|+|+
T Consensus       304 ~~~~~~--~~~~~a~~~~~~~~~~~~~v~  330 (330)
T cd08245         304 IETFPL--DQANEAYERMEKGDVRFRFVL  330 (330)
T ss_pred             EEEEcH--HHHHHHHHHHHcCCCCcceeC
Confidence            467888  999999999999988899875

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.3e-36  Score=274.55  Aligned_cols=297  Identities=35%  Similarity=0.650  Sum_probs=244.8

Q ss_pred             eEEEEeeC--CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCC
Q 018075           16 MAAWLLGI--KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE   93 (361)
Q Consensus        16 ~~~~~~~~--~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   93 (361)
                      +++++.++  +.+++++++.|++.+++|+|||.++++|++|++...+...   ....|.++|+|++|+|+++|++++.++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~---~~~~p~~~G~e~~G~V~~vG~~v~~~~   78 (306)
T cd08258           2 KALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYD---PVETPVVLGHEFSGTIVEVGPDVEGWK   78 (306)
T ss_pred             eeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCC---cCCCCeeeccceEEEEEEECCCcCcCC
Confidence            44555533  5699999999999999999999999999999988766431   134578999999999999999999999


Q ss_pred             CCCEEEecCC-cCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHHHHHHHH
Q 018075           94 VGDRVALEPG-ISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACR  172 (361)
Q Consensus        94 ~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~  172 (361)
                      +||+|++.+. .+|+.|.+|..+....|+.-..++ ....|+|++|+.++.+.++++|+++++++|+.+.++.+||+++.
T Consensus        79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~a~~~l~  157 (306)
T cd08258          79 VGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIG-TQADGGFAEYVLVPEESLHELPENLSLEAAALTEPLAVAVHAVA  157 (306)
T ss_pred             CCCEEEEccCcCCCCCCcchhCcCcccCCCCceee-ecCCCceEEEEEcchHHeEECcCCCCHHHHHhhchHHHHHHHHH
Confidence            9999999764 589999999999999998754443 23569999999999999999999999998886678888999985


Q ss_pred             h-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEE--eCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcC
Q 018075          173 R-ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIIT--DVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       173 ~-~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v--~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      . .++++|++|||.|+|.+|++++++|+.+|++ ++.+  ++++++.++++++|++.+ ++.  ..++.+.+..+.  .+
T Consensus       158 ~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~~-v~~~~~~~~~~~~~~~~~~g~~~~-~~~--~~~~~~~l~~~~--~~  231 (306)
T cd08258         158 ERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGAT-VVVVGTEKDEVRLDVAKELGADAV-NGG--EEDLAELVNEIT--DG  231 (306)
T ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCE-EEEECCCCCHHHHHHHHHhCCccc-CCC--cCCHHHHHHHHc--CC
Confidence            4 8899999999988899999999999999995 5554  345668889999998766 542  345555554443  35


Q ss_pred             CCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCC-CCcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcC
Q 018075          250 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK-TEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSG  322 (361)
Q Consensus       250 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g  322 (361)
                      .++|++||++|....+...+++|+++|+++.+|... ....+....++++++++.|++.+ .++++++++++++|
T Consensus       232 ~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~  306 (306)
T cd08258         232 DGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSRSSTPASWETALRLLASG  306 (306)
T ss_pred             CCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhcCcEEEEEecCchHhHHHHHHHHhcC
Confidence            689999999987668999999999999999998765 23445566778899999999987 77899999999876

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.2e-35  Score=270.68  Aligned_cols=300  Identities=30%  Similarity=0.451  Sum_probs=243.4

Q ss_pred             eCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhh-cccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEe
Q 018075           22 GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHF-KTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVAL  100 (361)
Q Consensus        22 ~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~-~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~  100 (361)
                      +++.+++++++.|++.++||+|||.++++|+.|+... .|.... ..+..|.++|+|++|+|+++|++++.+++||+|++
T Consensus         3 ~~~~~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~-~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~   81 (312)
T cd08269           3 GPGRFEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWF-VYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAG   81 (312)
T ss_pred             CCCeeEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCc-ccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEE
Confidence            5678999999999999999999999999999998876 553211 11235789999999999999999999999999986


Q ss_pred             cCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHHHhcCCCCC
Q 018075          101 EPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRRANVGPE  179 (361)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l~~~~~~~g  179 (361)
                      .                             ..|+|++|+.++++.++++|+++  ..++.. .++.+++++++..++++|
T Consensus        82 ~-----------------------------~~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~~~~~~~~  130 (312)
T cd08269          82 L-----------------------------SGGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFRRGWIRAG  130 (312)
T ss_pred             e-----------------------------cCCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHHhcCCCCC
Confidence            3                             25899999999999999999998  233333 677888888888889999


Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEcc
Q 018075          180 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV  259 (361)
Q Consensus       180 ~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  259 (361)
                      +++||+|+|++|++++++|+.+|++.++++++++++.++++++|++.+++.  ...++.+.+.++.  .+.++|++|||+
T Consensus       131 ~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~--~~~~~~~~l~~~~--~~~~vd~vld~~  206 (312)
T cd08269         131 KTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTD--DSEAIVERVRELT--GGAGADVVIEAV  206 (312)
T ss_pred             CEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecC--CCcCHHHHHHHHc--CCCCCCEEEECC
Confidence            999999989999999999999999647888888889999999999877653  3345555555443  356899999999


Q ss_pred             CChHHHHHHHHhhcCCCEEEEEccCC-CCcceechHhhhcCcEEEEeecC-----CCcHHHHHHHHHcCCCCCCCceEEE
Q 018075          260 GFDKTMSTALNATRPGGKVCLIGLAK-TEMTVALTPAAAREVDVIGIFRY-----RSTWPLCIEFLRSGKIDVKPLITHR  333 (361)
Q Consensus       260 g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~-----~~~~~~~~~~l~~g~~~~~~~~~~~  333 (361)
                      |+.......+++|+++|+++.+|... ....+......+++.++.++...     .+.++.+++++++|.+.+.....+.
T Consensus       207 g~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  286 (312)
T cd08269         207 GHQWPLDLAGELVAERGRLVIFGYHQDGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSLLTHE  286 (312)
T ss_pred             CCHHHHHHHHHHhccCCEEEEEccCCCCCcccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchhheeee
Confidence            87768899999999999999998653 22233444677888888776543     3578899999999998543345677


Q ss_pred             ecCChhhHHHHHHHHhcCCC-ceEEEE
Q 018075          334 FGFTQKEIEDAFEISAQGGN-AIKVMF  359 (361)
Q Consensus       334 ~~l~~~~~~~a~~~l~~~~~-~gkvvi  359 (361)
                      |++  ++++++++.+.+++. .+|+++
T Consensus       287 ~~~--~~~~~a~~~~~~~~~~~~~~~~  311 (312)
T cd08269         287 FPL--EELGDAFEAARRRPDGFIKGVI  311 (312)
T ss_pred             ecH--HHHHHHHHHHHhCCCCceEEEe
Confidence            888  999999999999855 688876

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=100.00  E-value=4.2e-36  Score=255.42  Aligned_cols=292  Identities=18%  Similarity=0.185  Sum_probs=240.2

Q ss_pred             CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeC--CCCCCCCCCCEEEec
Q 018075           24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVG--SEVKSLEVGDRVALE  101 (361)
Q Consensus        24 ~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG--~~v~~~~~Gd~V~~~  101 (361)
                      ++++++++++|.|+++|||+|+.|.+++|.....++...    ....|+-+|-..+|.++...  |...+|++||.|+. 
T Consensus        25 d~F~lee~~vp~p~~GqvLl~~~ylS~DPymRgrm~d~~----SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~-   99 (340)
T COG2130          25 DDFRLEEVDVPEPGEGQVLLRTLYLSLDPYMRGRMSDAP----SYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVG-   99 (340)
T ss_pred             CCceeEeccCCCCCcCceEEEEEEeccCHHHeecccCCc----ccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEe-
Confidence            679999999999999999999999999996554433221    23567777766665544433  45678999999985 


Q ss_pred             CCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCC---CcccccccchhHHHHHHHHh-cCCC
Q 018075          102 PGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNV---SLEEGAMCEPLSVGVHACRR-ANVG  177 (361)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~---~~~~aa~~~~~~~a~~~l~~-~~~~  177 (361)
                                                    ..+|+||..++.+.+.|++++.   ++....+-++..|||.+|.+ +..|
T Consensus       100 ------------------------------~~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk  149 (340)
T COG2130         100 ------------------------------VSGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPK  149 (340)
T ss_pred             ------------------------------cccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCC
Confidence                                          5689999999999999998664   33334455799999999876 8999


Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH-cCCCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      +|++|+|-+ +|++|..+.|+||..|. +||++..+++|.+++++ +|.+.+++|..  +++.+.+.+.   .+.|+|+.
T Consensus       150 ~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~--~d~~~~L~~a---~P~GIDvy  223 (340)
T COG2130         150 AGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKA--EDFAQALKEA---CPKGIDVY  223 (340)
T ss_pred             CCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCc--ccHHHHHHHH---CCCCeEEE
Confidence            999999998 69999999999999999 79999999999999988 99999999876  4787776654   58999999


Q ss_pred             EEccCChHHHHHHHHhhcCCCEEEEEccCCCCcc--ee-----chHhhhcCcEEEEeecC-------CCcHHHHHHHHHc
Q 018075          256 FDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMT--VA-----LTPAAAREVDVIGIFRY-------RSTWPLCIEFLRS  321 (361)
Q Consensus       256 ld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~--~~-----~~~~~~~~~~i~~~~~~-------~~~~~~~~~~l~~  321 (361)
                      ||++|++ .++..+..|+.++|+..||..+.-+.  .+     ...++.++..+.|+...       ++.++++.+|+++
T Consensus       224 feNVGg~-v~DAv~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~  302 (340)
T COG2130         224 FENVGGE-VLDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKE  302 (340)
T ss_pred             EEcCCch-HHHHHHHhhccccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHc
Confidence            9999987 99999999999999999996543211  11     22366778999998762       4678899999999


Q ss_pred             CCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          322 GKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       322 g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      |+++.+..+  +-+|  +.+++|+.-|-+|+.+||.|+++
T Consensus       303 GKi~~~eti--~dGl--EnaP~Af~gLl~G~N~GK~vvKv  338 (340)
T COG2130         303 GKIQYRETI--VDGL--ENAPEAFIGLLSGKNFGKLVVKV  338 (340)
T ss_pred             CceeeEeee--hhhh--hccHHHHHHHhcCCccceEEEEe
Confidence            999776644  3468  99999999999999999999985

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=100.00  E-value=2.4e-35  Score=270.18  Aligned_cols=310  Identities=24%  Similarity=0.307  Sum_probs=246.0

Q ss_pred             eEEEEee---CCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCC
Q 018075           16 MAAWLLG---IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL   92 (361)
Q Consensus        16 ~~~~~~~---~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   92 (361)
                      +++++.+   +..+++.+.+.|.+.+++|+|+|.++++|+.|+....|..........|.++|+|++|+|+++|++++.+
T Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~~   81 (324)
T cd08244           2 RAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDPA   81 (324)
T ss_pred             eEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCCC
Confidence            4445554   2467788888888899999999999999999998877643222223557899999999999999999999


Q ss_pred             CCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHH
Q 018075           93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHAC  171 (361)
Q Consensus        93 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l  171 (361)
                      ++||+|++.+.                          ...|+|++|+.++.+.++++|+++++++++.+ ..+.+||..+
T Consensus        82 ~~Gd~V~~~~~--------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~~  135 (324)
T cd08244          82 WLGRRVVAHTG--------------------------RAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTALGLL  135 (324)
T ss_pred             CCCCEEEEccC--------------------------CCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHHHHH
Confidence            99999986310                          13789999999999999999999999988754 4667776555


Q ss_pred             HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCC
Q 018075          172 RRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       172 ~~~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (361)
                      +..++++++++||+| +|++|++++++|+..|+ .++++++++++.+.++++|++.++++.  ..++.+.+.+.  ..+.
T Consensus       136 ~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~--~~~~  210 (324)
T cd08244         136 DLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVAVDYT--RPDWPDQVREA--LGGG  210 (324)
T ss_pred             HhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEecC--CccHHHHHHHH--cCCC
Confidence            668899999999998 69999999999999999 588888889999999999998776643  23444444333  2356


Q ss_pred             CccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCc-ceechHhhhcCcEEEEeecC-------CCcHHHHHHHHHcC
Q 018075          251 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM-TVALTPAAAREVDVIGIFRY-------RSTWPLCIEFLRSG  322 (361)
Q Consensus       251 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~-------~~~~~~~~~~l~~g  322 (361)
                      ++|+++|++|+. ..+.++++|+++|+++.+|...... .++....+.++.++.+....       .+.+++++++++++
T Consensus       211 ~~d~vl~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  289 (324)
T cd08244         211 GVTVVLDGVGGA-IGRAALALLAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAG  289 (324)
T ss_pred             CceEEEECCChH-hHHHHHHHhccCcEEEEEecCCCCCCccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCC
Confidence            899999999977 7799999999999999998654321 23334456777887776543       24577789999999


Q ss_pred             CCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          323 KIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       323 ~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      .+.  +.+.+.|++  +++++|++.+.++...+|+++++
T Consensus       290 ~l~--~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~  324 (324)
T cd08244         290 RLV--PVVGQTFPL--ERAAEAHAALEARSTVGKVLLLP  324 (324)
T ss_pred             Ccc--CccceEEeH--HHHHHHHHHHHcCCCCceEEEeC
Confidence            983  446677888  99999999999999999999864

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=1.4e-35  Score=273.13  Aligned_cols=298  Identities=19%  Similarity=0.286  Sum_probs=234.3

Q ss_pred             CCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecC
Q 018075           23 IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEP  102 (361)
Q Consensus        23 ~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~  102 (361)
                      ++.+++.++|.|+++++||+|||.++++|+.|+....+...   ....|.++|+|++|+|+++|++++.|++||+|++..
T Consensus        14 ~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~---~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~   90 (336)
T TIGR02817        14 PDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAP---EAGQPKILGWDAAGVVVAVGDEVTLFKPGDEVWYAG   90 (336)
T ss_pred             cccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCC---CCCCCcccceeeEEEEEEeCCCCCCCCCCCEEEEcC
Confidence            46789999999999999999999999999999988766431   134678999999999999999999999999998631


Q ss_pred             CcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHHH-hcCCCC--
Q 018075          103 GISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACR-RANVGP--  178 (361)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l~-~~~~~~--  178 (361)
                                               .....|+|++|++++++.++++|+++++++|+.+ ....+||+++. ..++++  
T Consensus        91 -------------------------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~  145 (336)
T TIGR02817        91 -------------------------DIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPV  145 (336)
T ss_pred             -------------------------CCCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCC
Confidence                                     0123689999999999999999999999998855 47788999885 477777  


Q ss_pred             ---CCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCcc
Q 018075          179 ---ETNVMIMG-SGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       179 ---g~~vlI~G-~g~~G~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                         |++|||+| +|++|++++|+|+.+ |+ .|++++.++++.+.++++|++.++++..   ++.+.+.+   ..++++|
T Consensus       146 ~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~g~~~~~~~~~---~~~~~i~~---~~~~~vd  218 (336)
T TIGR02817       146 AGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLELGAHHVIDHSK---PLKAQLEK---LGLEAVS  218 (336)
T ss_pred             CCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHcCCCEEEECCC---CHHHHHHH---hcCCCCC
Confidence               99999998 599999999999998 98 6888888889999999999988876432   45555544   2456899


Q ss_pred             EEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-------------CCcHHHHHHHHH
Q 018075          254 VSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-------------RSTWPLCIEFLR  320 (361)
Q Consensus       254 ~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-------------~~~~~~~~~~l~  320 (361)
                      +++|++++.......+++|+++|+++.++...   .+....+..++.++.+....             ...++++++++.
T Consensus       219 ~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  295 (336)
T TIGR02817       219 YVFSLTHTDQHFKEIVELLAPQGRFALIDDPA---ELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVD  295 (336)
T ss_pred             EEEEcCCcHHHHHHHHHHhccCCEEEEEcccc---cccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHH
Confidence            99999876668999999999999999875321   22333344444444432111             135788999999


Q ss_pred             cCCCCCCCceEEEec-CChhhHHHHHHHHhcCCCceEEEEe
Q 018075          321 SGKIDVKPLITHRFG-FTQKEIEDAFEISAQGGNAIKVMFN  360 (361)
Q Consensus       321 ~g~~~~~~~~~~~~~-l~~~~~~~a~~~l~~~~~~gkvvi~  360 (361)
                      +|.++  +.+.+.++ ++++++++|++.+.+++..||++++
T Consensus       296 ~~~l~--~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  334 (336)
T TIGR02817       296 AGKIR--TTLAETFGTINAANLKRAHALIESGKARGKIVLE  334 (336)
T ss_pred             CCCee--ccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence            99984  33344444 2338999999999999889999875

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=100.00  E-value=1.9e-35  Score=272.90  Aligned_cols=311  Identities=22%  Similarity=0.291  Sum_probs=242.3

Q ss_pred             ceEEEEeeCC----ceEEEEecCCCCCC-CcEEEEEeeeecCcchhhhhccccccccc--CCCCcccCcceeEEEEEeCC
Q 018075           15 NMAAWLLGIK----TLKIQPYHLPTLGP-QDVKVRIKALGICGSDVHHFKTMRCANFI--VKKPMVIGHECAGIIEEVGS   87 (361)
Q Consensus        15 ~~~~~~~~~~----~l~~~~~~~p~~~~-~eVlV~v~~~~l~~~D~~~~~g~~~~~~~--~~~p~~~G~e~~G~V~~vG~   87 (361)
                      |++.++.+++    .+.+++.|.|+|.+ ++|+||+.++|+|++|+....|.......  ...|.++|+|++|+|+++|+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~   80 (341)
T cd08290           1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS   80 (341)
T ss_pred             CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence            3555666543    38999999998887 99999999999999999987764321100  12577999999999999999


Q ss_pred             CCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHH
Q 018075           88 EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSV  166 (361)
Q Consensus        88 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~  166 (361)
                      +++.|++||+|++..                           ...|+|++|+.++.+.++++|+++++++++.+ ..+.+
T Consensus        81 ~v~~~~~Gd~V~~~~---------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~t  133 (341)
T cd08290          81 GVKSLKPGDWVIPLR---------------------------PGLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCT  133 (341)
T ss_pred             CCCCCCCCCEEEecC---------------------------CCCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHH
Confidence            999999999998631                           12599999999999999999999999888865 47888


Q ss_pred             HHHHHHh-cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCh----hHHHHHHHcCCCEEeecCCC-ccchhH
Q 018075          167 GVHACRR-ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDV----QRLSIARNLGADETAKVSTD-IEDVDT  239 (361)
Q Consensus       167 a~~~l~~-~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~----~~~~~~~~lg~~~~~~~~~~-~~~~~~  239 (361)
                      ||+++.. ..+++|++|||+| +|++|++++|+|+..|++ ++++..++    ++.+.++++|++.++++... ..++..
T Consensus       134 a~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  212 (341)
T cd08290         134 AYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIK-TINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATE  212 (341)
T ss_pred             HHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCCe-EEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccHHH
Confidence            9999865 7889999999998 599999999999999995 55554444    67888899999988765321 003444


Q ss_pred             HHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC-CcceechHhhhcCcEEEEeecC----------
Q 018075          240 DVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRY----------  308 (361)
Q Consensus       240 ~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~----------  308 (361)
                      .+....   ++++|++||++|+. .+...+++++++|+++.+|.... ...++....+.++.++.+....          
T Consensus       213 ~i~~~~---~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (341)
T cd08290         213 LLKSAP---GGRPKLALNCVGGK-SATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRANPEE  288 (341)
T ss_pred             HHHHHc---CCCceEEEECcCcH-hHHHHHHHhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEecHHHHhhcCHHH
Confidence            443332   23899999999986 78889999999999999985432 2234444557788888887643          


Q ss_pred             -CCcHHHHHHHHHcCCCCCCCceEEEe---cCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          309 -RSTWPLCIEFLRSGKIDVKPLITHRF---GFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       309 -~~~~~~~~~~l~~g~~~~~~~~~~~~---~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                       ...+..+++++.+|.+.+  .....+   ++  ++++++++.+.++...+|+|+++
T Consensus       289 ~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~--~~~~~a~~~~~~~~~~~k~v~~~  341 (341)
T cd08290         289 KEDMLEELAELIREGKLKA--PPVEKVTDDPL--EEFKDALANALKGGGGGKQVLVM  341 (341)
T ss_pred             HHHHHHHHHHHHHcCCccC--CcccccccCCH--HHHHHHHHHHhhcCCCCeEEEeC
Confidence             124778899999999843  344455   77  99999999999998999999875

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.2e-34  Score=263.29  Aligned_cols=285  Identities=23%  Similarity=0.315  Sum_probs=233.9

Q ss_pred             CCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecC
Q 018075           23 IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEP  102 (361)
Q Consensus        23 ~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~  102 (361)
                      |..+++++.+.|.+.++||+|||.++++|+.|++...+       ...|.++|+|++|+|+++|+++..|++||+|++. 
T Consensus        11 ~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~-------~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~-   82 (305)
T cd08270          11 PLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAE-------RPDGAVPGWDAAGVVERAAADGSGPAVGARVVGL-   82 (305)
T ss_pred             CceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhcc-------CCCCCcccceeEEEEEEeCCCCCCCCCCCEEEEe-
Confidence            56788889999999999999999999999999986541       1336789999999999999999999999999862 


Q ss_pred             CcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccc-hhHHHHHHHHhcCCCCCCE
Q 018075          103 GISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRRANVGPETN  181 (361)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~  181 (361)
                                                 ...|+|++|+.++.+.++++|+++++++++.+. .+.+||++++.....+|++
T Consensus        83 ---------------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~~~~~  135 (305)
T cd08270          83 ---------------------------GAMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPLLGRR  135 (305)
T ss_pred             ---------------------------cCCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCCCCCE
Confidence                                       136899999999999999999999999888654 7788999987744456999


Q ss_pred             EEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccC
Q 018075          182 VMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG  260 (361)
Q Consensus       182 vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  260 (361)
                      ++|+|+ |++|++++++|+..|+ .++.+++++++.+.++++|++..+....   +       +   .+.++|++||++|
T Consensus       136 vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~---~-------~---~~~~~d~vl~~~g  201 (305)
T cd08270         136 VLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVGGS---E-------L---SGAPVDLVVDSVG  201 (305)
T ss_pred             EEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEeccc---c-------c---cCCCceEEEECCC
Confidence            999995 9999999999999999 5888888899999999999875543111   1       1   1357999999999


Q ss_pred             ChHHHHHHHHhhcCCCEEEEEccCCCC-cceechHhhh--cCcEEEEeecC-----CCcHHHHHHHHHcCCCCCCCceEE
Q 018075          261 FDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAA--REVDVIGIFRY-----RSTWPLCIEFLRSGKIDVKPLITH  332 (361)
Q Consensus       261 ~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~--~~~~i~~~~~~-----~~~~~~~~~~l~~g~~~~~~~~~~  332 (361)
                      +. .....+++|+++|+++.+|..... ..++...+..  ++.++.++...     .+.+..++++++++++.  +.+.+
T Consensus       202 ~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~~~  278 (305)
T cd08270         202 GP-QLARALELLAPGGTVVSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAAGRLD--PRIGW  278 (305)
T ss_pred             cH-HHHHHHHHhcCCCEEEEEeccCCCcccccHHHHhcccccceEEEEEccCHHHHHHHHHHHHHHHHCCCcc--ceecc
Confidence            76 889999999999999999865422 2233444443  57787777644     35678899999999995  44667


Q ss_pred             EecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          333 RFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       333 ~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      .+++  ++++++++.+.++...||+++++
T Consensus       279 ~~~~--~~~~~a~~~~~~~~~~gkvvi~~  305 (305)
T cd08270         279 RGSW--TEIDEAAEALLARRFRGKAVLDV  305 (305)
T ss_pred             EEcH--HHHHHHHHHHHcCCCCceEEEeC
Confidence            8888  99999999999998999999875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=100.00  E-value=7.5e-35  Score=267.37  Aligned_cols=308  Identities=24%  Similarity=0.282  Sum_probs=239.1

Q ss_pred             ceEEEEee---CCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCC
Q 018075           15 NMAAWLLG---IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS   91 (361)
Q Consensus        15 ~~~~~~~~---~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   91 (361)
                      |++..+.+   ++.+++++++.|.++++||+|||.++|+|++|+....|....   ...|.++|+|++|+|+.+|++++.
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~---~~~~~~~g~e~~G~v~~vG~~v~~   78 (327)
T PRK10754          2 AKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPP---PSLPSGLGTEAAGVVSKVGSGVKH   78 (327)
T ss_pred             ceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCC---CCCCCccCcceEEEEEEeCCCCCC
Confidence            34444443   357999999999999999999999999999999877654321   235778999999999999999999


Q ss_pred             CCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHH
Q 018075           92 LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHA  170 (361)
Q Consensus        92 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~  170 (361)
                      +++||+|++.                           ....|+|++|+.++.+.++++|+++++++++.+ ....+||.+
T Consensus        79 ~~~Gd~V~~~---------------------------~~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~  131 (327)
T PRK10754         79 IKVGDRVVYA---------------------------QSALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYL  131 (327)
T ss_pred             CCCCCEEEEC---------------------------CCCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHH
Confidence            9999999852                           112589999999999999999999999888754 467788888


Q ss_pred             HHh-cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhc
Q 018075          171 CRR-ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       171 l~~-~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      +.. ..+++|++|+|+| +|.+|++++++|+.+|+ .++.++.++++.+.++++|++..++..  ..++.+.+.++.  .
T Consensus       132 l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~--~  206 (327)
T PRK10754        132 LRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVINYR--EENIVERVKEIT--G  206 (327)
T ss_pred             HHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEcCC--CCcHHHHHHHHc--C
Confidence            765 7899999999997 69999999999999999 577888889999999999998776543  345555555443  3


Q ss_pred             CCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC-cceechHhhhcC------cEEEEeecC----CCcHHHHHH
Q 018075          249 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAARE------VDVIGIFRY----RSTWPLCIE  317 (361)
Q Consensus       249 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~------~~i~~~~~~----~~~~~~~~~  317 (361)
                      +.++|++||++++. .....+++++++|+++.+|..... ..+....+..++      ..+.+....    .+.+..+++
T Consensus       207 ~~~~d~vl~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (327)
T PRK10754        207 GKKVRVVYDSVGKD-TWEASLDCLQRRGLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFS  285 (327)
T ss_pred             CCCeEEEEECCcHH-HHHHHHHHhccCCEEEEEccCCCCCCCcCHHHHhccCceEEecceeecccCCHHHHHHHHHHHHH
Confidence            56899999999975 888999999999999999865422 122222221111      112222111    123456889


Q ss_pred             HHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075          318 FLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  360 (361)
Q Consensus       318 ~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~  360 (361)
                      ++.+|.+++.....+.|++  ++++++++.+.+++..+|+|+.
T Consensus       286 ~l~~g~l~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~~~~~  326 (327)
T PRK10754        286 LIASGVIKVDVAEQQKFPL--KDAQRAHEILESRATQGSSLLI  326 (327)
T ss_pred             HHHCCCeeeecccCcEEcH--HHHHHHHHHHHcCCCcceEEEe
Confidence            9999998644444577888  9999999999999999999985

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-34  Score=264.67  Aligned_cols=308  Identities=23%  Similarity=0.328  Sum_probs=243.6

Q ss_pred             cceEEEEeeCC---ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCC
Q 018075           14 QNMAAWLLGIK---TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVK   90 (361)
Q Consensus        14 ~~~~~~~~~~~---~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   90 (361)
                      ||+++++.+++   .+++++.+.|++.++||+|||.++++|+.|+....|...  .....|.++|+|++|+|+++|++++
T Consensus         1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~--~~~~~~~~~g~e~~G~v~~vG~~v~   78 (334)
T PTZ00354          1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYP--PPPGSSEILGLEVAGYVEDVGSDVK   78 (334)
T ss_pred             CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCC--CCCCCCcccceeeEEEEEEeCCCCC
Confidence            45666666543   578888888889999999999999999999888765431  1134467899999999999999999


Q ss_pred             CCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHH
Q 018075           91 SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVH  169 (361)
Q Consensus        91 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~  169 (361)
                      .+++||+|+..                            ..+|+|++|++++.+.++++|+++++.+++.+ .++.+||+
T Consensus        79 ~~~~Gd~V~~~----------------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~  130 (334)
T PTZ00354         79 RFKEGDRVMAL----------------------------LPGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQ  130 (334)
T ss_pred             CCCCCCEEEEe----------------------------cCCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHH
Confidence            99999999862                            12589999999999999999999999888755 57888999


Q ss_pred             HHHh-cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccc-hhHHHHHHHh
Q 018075          170 ACRR-ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIED-VDTDVGKIQN  246 (361)
Q Consensus       170 ~l~~-~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~-~~~~~~~~~~  246 (361)
                      +++. ..+++|++|||+| +|++|++++++|+.+|+. ++.+.+++++.+.++++|++.+++...  .+ +.+.+.+.. 
T Consensus       131 ~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~~-  206 (334)
T PTZ00354        131 LLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAA-TIITTSSEEKVDFCKKLAAIILIRYPD--EEGFAPKVKKLT-  206 (334)
T ss_pred             HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHcCCcEEEecCC--hhHHHHHHHHHh-
Confidence            9866 7899999999998 699999999999999995 556778889999999999987776432  22 444444332 


Q ss_pred             hcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC-cc-eechHhhhcCcEEEEeecCC-----------CcHH
Q 018075          247 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MT-VALTPAAAREVDVIGIFRYR-----------STWP  313 (361)
Q Consensus       247 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~-~~~~~~~~~~~~i~~~~~~~-----------~~~~  313 (361)
                       .+.++|++||++++. .+..++++|+++|+++.++..... .. +....+..+..++.++....           +.++
T Consensus       207 -~~~~~d~~i~~~~~~-~~~~~~~~l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (334)
T PTZ00354        207 -GEKGVNLVLDCVGGS-YLSETAEVLAVDGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFER  284 (334)
T ss_pred             -CCCCceEEEECCchH-HHHHHHHHhccCCeEEEEecCCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHH
Confidence             357899999999865 899999999999999999854332 11 44444556666777765331           2346


Q ss_pred             HHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          314 LCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       314 ~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      .++++++++.+.  +.+.+.+++  ++++++++.+.+++..+|+|+++
T Consensus       285 ~~~~~~~~~~l~--~~~~~~~~~--~~~~~~~~~~~~~~~~~kvvv~~  328 (334)
T PTZ00354        285 EVLPYMEEGEIK--PIVDRTYPL--EEVAEAHTFLEQNKNIGKVVLTV  328 (334)
T ss_pred             HHHHHHHCCCcc--CccccEEcH--HHHHHHHHHHHhCCCCceEEEec
Confidence            788999999984  446677888  99999999999888889999853

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=5.1e-34  Score=262.59  Aligned_cols=329  Identities=28%  Similarity=0.371  Sum_probs=258.3

Q ss_pred             ceEEEEe---eCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCC
Q 018075           15 NMAAWLL---GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS   91 (361)
Q Consensus        15 ~~~~~~~---~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   91 (361)
                      |++.+++   ..+.+++++.+.|.+.++|++|++.++++|++|+....|....  ....|.++|||++|+|+++|+++.+
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~G~~~~~   78 (336)
T cd08276           1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPP--PVKDPLIPLSDGAGEVVAVGEGVTR   78 (336)
T ss_pred             CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCC--CCCCCcccccceeEEEEEeCCCCcC
Confidence            3455555   2367899998888899999999999999999999887664321  1246789999999999999999999


Q ss_pred             CCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHH
Q 018075           92 LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHA  170 (361)
Q Consensus        92 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~  170 (361)
                      +++||+|++.+...|+.+.+      ..|..+.+++ ...+|+|++|+.++.+.++++|+++++.+++.+ ..+.+||++
T Consensus        79 ~~~Gd~V~~~~~~~~~~~~~------~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~  151 (336)
T cd08276          79 FKVGDRVVPTFFPNWLDGPP------TAEDEASALG-GPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNA  151 (336)
T ss_pred             CCCCCEEEEecccccccccc------cccccccccc-cccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHH
Confidence            99999999865544433322      2333333333 224789999999999999999999999888755 467889988


Q ss_pred             HHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcC
Q 018075          171 CRR-ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       171 l~~-~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      +.. ..+++|++|+|+|+|++|++++++++..|+ .++.++.++++.+.++++|.+.+++... ..++...+.+..  .+
T Consensus       152 l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~--~~  227 (336)
T cd08276         152 LFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINYRT-TPDWGEEVLKLT--GG  227 (336)
T ss_pred             HHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcCCc-ccCHHHHHHHHc--CC
Confidence            865 789999999999989999999999999999 5788888889999999999888766432 134555554442  35


Q ss_pred             CCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC-cceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCC
Q 018075          250 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVK  327 (361)
Q Consensus       250 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~  327 (361)
                      .++|++||+++.. ....++++++++|+++.+|..... ........+.++.++.+.... .+.+.+++++++++.+.  
T Consensus       228 ~~~d~~i~~~~~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~--  304 (336)
T cd08276         228 RGVDHVVEVGGPG-TLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGSRAQFEAMNRAIEAHRIR--  304 (336)
T ss_pred             CCCcEEEECCChH-HHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEecCcHHHHHHHHHHHHcCCcc--
Confidence            6899999999855 889999999999999999865432 233344566788888887654 56788899999988883  


Q ss_pred             CceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          328 PLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       328 ~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      +...+.+++  ++++++++.+.+++..+|+++++
T Consensus       305 ~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~~  336 (336)
T cd08276         305 PVIDRVFPF--EEAKEAYRYLESGSHFGKVVIRV  336 (336)
T ss_pred             cccCcEEeH--HHHHHHHHHHHhCCCCceEEEeC
Confidence            335577888  99999999999988889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=100.00  E-value=5.4e-34  Score=261.89  Aligned_cols=296  Identities=23%  Similarity=0.303  Sum_probs=235.4

Q ss_pred             CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCC
Q 018075           24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPG  103 (361)
Q Consensus        24 ~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~  103 (361)
                      +.+++++++.|.+.++||+|||.++|+|+.|++...|.....  ..+|+++|+|++|+|+++|++++.+++||+|++.  
T Consensus        16 ~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~--~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~--   91 (329)
T cd08250          16 EATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPG--VKPPFDCGFEGVGEVVAVGEGVTDFKVGDAVATM--   91 (329)
T ss_pred             cCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCC--CCCCcccCceeEEEEEEECCCCCCCCCCCEEEEe--
Confidence            568999999999999999999999999999998876643211  3578899999999999999999999999999862  


Q ss_pred             cCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHHHHHHHHh-cCCCCCCEE
Q 018075          104 ISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRR-ANVGPETNV  182 (361)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~~-~~~~~g~~v  182 (361)
                                                 ..|+|++|+.++.+.++++|++. .+.+++...+.+||+++.. .++++|+++
T Consensus        92 ---------------------------~~g~~~s~~~v~~~~~~~ip~~~-~~~a~l~~~~~ta~~~l~~~~~~~~~~~v  143 (329)
T cd08250          92 ---------------------------SFGAFAEYQVVPARHAVPVPELK-PEVLPLLVSGLTASIALEEVGEMKSGETV  143 (329)
T ss_pred             ---------------------------cCcceeEEEEechHHeEECCCCc-chhhhcccHHHHHHHHHHHhcCCCCCCEE
Confidence                                       26899999999999999999983 2334455688899999865 789999999


Q ss_pred             EEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccCC
Q 018075          183 MIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGF  261 (361)
Q Consensus       183 lI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~  261 (361)
                      +|+| +|++|++++++|+..|+ .++.+++++++.+.++++|++.+++...  .++.+.+.+.   .+.++|++||++|+
T Consensus       144 lI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~--~~~~~~~~~~---~~~~vd~v~~~~g~  217 (329)
T cd08250         144 LVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDRPINYKT--EDLGEVLKKE---YPKGVDVVYESVGG  217 (329)
T ss_pred             EEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCceEEeCCC--ccHHHHHHHh---cCCCCeEEEECCcH
Confidence            9998 69999999999999999 4777778888889999999877765432  3444444333   34689999999996


Q ss_pred             hHHHHHHHHhhcCCCEEEEEccCCCCc---------cee-chHhhhcCcEEEEeecC------CCcHHHHHHHHHcCCCC
Q 018075          262 DKTMSTALNATRPGGKVCLIGLAKTEM---------TVA-LTPAAAREVDVIGIFRY------RSTWPLCIEFLRSGKID  325 (361)
Q Consensus       262 ~~~~~~~~~~l~~~G~~v~~g~~~~~~---------~~~-~~~~~~~~~~i~~~~~~------~~~~~~~~~~l~~g~~~  325 (361)
                      . .....+++++++|+++.+|......         ... ......++.++.+....      .+.+.+++++++++.+.
T Consensus       218 ~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  296 (329)
T cd08250         218 E-MFDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLV  296 (329)
T ss_pred             H-HHHHHHHHhccCCeEEEEecccCCcccCcccccccccccHHHhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCee
Confidence            4 8999999999999999998654210         011 12345667777776532      34577889999999885


Q ss_pred             CCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075          326 VKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  360 (361)
Q Consensus       326 ~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~  360 (361)
                      ......+.+++  +++++|++.+.++...+|++++
T Consensus       297 ~~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvvv~  329 (329)
T cd08250         297 CEVDPTRFRGL--ESVADAVDYLYSGKNIGKVVVE  329 (329)
T ss_pred             eeECCccccCH--HHHHHHHHHHHcCCCCceEEeC
Confidence            43334455777  9999999999999888999874

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=100.00  E-value=2.5e-34  Score=265.04  Aligned_cols=313  Identities=26%  Similarity=0.346  Sum_probs=237.1

Q ss_pred             ceEEEEeeC--CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCC
Q 018075           15 NMAAWLLGI--KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL   92 (361)
Q Consensus        15 ~~~~~~~~~--~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   92 (361)
                      |++.++.++  ..+++++++.|.++++||+|+|.++++|++|+....+..    ....|.++|+|++|+|+.+|++++.+
T Consensus         1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~----~~~~~~~~g~e~~G~v~~vG~~v~~~   76 (339)
T cd08249           1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF----IPSYPAILGCDFAGTVVEVGSGVTRF   76 (339)
T ss_pred             CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc----ccCCCceeeeeeeEEEEEeCCCcCcC
Confidence            356666667  789999999999999999999999999999988764422    12357789999999999999999999


Q ss_pred             CCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccc-hhHHHHHHH
Q 018075           93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC  171 (361)
Q Consensus        93 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-~~~~a~~~l  171 (361)
                      ++||+|++.+...++                    ....+|+|++|+.++.+.++++|+++++++++.+. ++.+||+++
T Consensus        77 ~~Gd~V~~~~~~~~~--------------------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l  136 (339)
T cd08249          77 KVGDRVAGFVHGGNP--------------------NDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALAL  136 (339)
T ss_pred             CCCCEEEEEeccccC--------------------CCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHH
Confidence            999999975321110                    01247999999999999999999999999888664 788899988


Q ss_pred             Hh-cCC----------CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhH
Q 018075          172 RR-ANV----------GPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDT  239 (361)
Q Consensus       172 ~~-~~~----------~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~  239 (361)
                      .. .++          ++++++||+|+ |++|++++++|+..|++ ++.+. ++++.+.++++|++.++++.  ..++.+
T Consensus       137 ~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~-v~~~~-~~~~~~~~~~~g~~~v~~~~--~~~~~~  212 (339)
T cd08249         137 FQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYK-VITTA-SPKNFDLVKSLGADAVFDYH--DPDVVE  212 (339)
T ss_pred             hccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCe-EEEEE-CcccHHHHHhcCCCEEEECC--CchHHH
Confidence            54 433          79999999995 99999999999999994 56665 45888888999998877643  245555


Q ss_pred             HHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcC--CCEEEEEccCCCCcceechHhhhcCcEEEEeec---C-----C
Q 018075          240 DVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRP--GGKVCLIGLAKTEMTVALTPAAAREVDVIGIFR---Y-----R  309 (361)
Q Consensus       240 ~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~---~-----~  309 (361)
                      .++++   .++++|++||++|++..+...++++++  +|+++.++......... ...............   .     .
T Consensus       213 ~l~~~---~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  288 (339)
T cd08249         213 DIRAA---TGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEETEPR-KGVKVKFVLGYTVFGEIPEDREFGE  288 (339)
T ss_pred             HHHHh---cCCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCccccCC-CCceEEEEEeeeecccccccccchH
Confidence            55443   357899999999984589999999999  99999998654321111 111111111111111   1     2


Q ss_pred             CcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCC-CceEEEEeC
Q 018075          310 STWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGG-NAIKVMFNL  361 (361)
Q Consensus       310 ~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~-~~gkvvi~~  361 (361)
                      ..++.++++++++++.+.  ....+++.++++++|++.+.+++ ..+|+|+++
T Consensus       289 ~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~  339 (339)
T cd08249         289 VFWKYLPELLEEGKLKPH--PVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL  339 (339)
T ss_pred             HHHHHHHHHHHcCCccCC--CceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence            457778999999999544  33445622399999999999998 899999975

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=1.4e-34  Score=262.40  Aligned_cols=299  Identities=27%  Similarity=0.399  Sum_probs=223.4

Q ss_pred             CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccc-cCCCCcccCcceeEE---EEEeC-CCCCCCCCCCEE
Q 018075           24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANF-IVKKPMVIGHECAGI---IEEVG-SEVKSLEVGDRV   98 (361)
Q Consensus        24 ~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~-~~~~p~~~G~e~~G~---V~~vG-~~v~~~~~Gd~V   98 (361)
                      ..+..++.++|.|.+++++|++.++++|+.|+.+..|...... -..+|.+.+.++.|+   +...| ..+..+..||.+
T Consensus        18 ~~~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~   97 (347)
T KOG1198|consen   18 EVLFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAV   97 (347)
T ss_pred             ceEEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEE
Confidence            3456668999999999999999999999999999887643211 024564444444444   44444 233445556655


Q ss_pred             EecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccc-hhHHHHHHHHh-c--
Q 018075           99 ALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRR-A--  174 (361)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-~~~~a~~~l~~-~--  174 (361)
                      ..                            ....|+|+||+++++..++++|+++++.+||.++ ++.+||.++.. .  
T Consensus        98 ~~----------------------------~~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~  149 (347)
T KOG1198|consen   98 VA----------------------------FLSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPG  149 (347)
T ss_pred             ee----------------------------ccCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhcccc
Confidence            43                            3458999999999999999999999999999775 78899999966 7  


Q ss_pred             ----CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcC
Q 018075          175 ----NVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       175 ----~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                          +.++|++|||+| +|++|++++|+|+..|+ ..+++.+++++.++++++|++.+++|+.  +++.+.++..   .+
T Consensus       150 ~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy~~--~~~~e~~kk~---~~  223 (347)
T KOG1198|consen  150 KRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDYKD--ENVVELIKKY---TG  223 (347)
T ss_pred             ccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecCCC--HHHHHHHHhh---cC
Confidence                799999999997 69999999999999996 4566669999999999999999999865  4555554433   36


Q ss_pred             CCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC-cceechHhh--hc----------CcEEEEee--cCCCcHHH
Q 018075          250 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAA--AR----------EVDVIGIF--RYRSTWPL  314 (361)
Q Consensus       250 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~--~~----------~~~i~~~~--~~~~~~~~  314 (361)
                      .+||+||||+|+. .......++..+|+...++..... .+.......  .+          ........  ...+.++.
T Consensus       224 ~~~DvVlD~vg~~-~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  302 (347)
T KOG1198|consen  224 KGVDVVLDCVGGS-TLTKSLSCLLKGGGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKA  302 (347)
T ss_pred             CCccEEEECCCCC-ccccchhhhccCCceEEEEeccccccccccccchhhhhhhhheeeeeeccceeeeeecCCHHHHHH
Confidence            7999999999987 777888888888765555433211 011110000  11          11111111  11567889


Q ss_pred             HHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          315 CIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       315 ~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      +.+++++|++  ++.+.+.|++  +++.+|++.+..+...||+++.+
T Consensus       303 l~~~ie~gki--kp~i~~~~p~--~~~~ea~~~~~~~~~~GK~vl~~  345 (347)
T KOG1198|consen  303 LVELIEKGKI--KPVIDSVYPF--SQAKEAFEKLEKSHATGKVVLEK  345 (347)
T ss_pred             HHHHHHcCcc--cCCcceeeeH--HHHHHHHHHHhhcCCcceEEEEe
Confidence            9999999988  8889999999  99999999999999999999864

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=100.00  E-value=5.8e-34  Score=260.91  Aligned_cols=296  Identities=26%  Similarity=0.360  Sum_probs=239.0

Q ss_pred             ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCCc
Q 018075           25 TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGI  104 (361)
Q Consensus        25 ~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~  104 (361)
                      .+++++.+.|.+.+++|+|||.++++|+.|.....+....  .+..|.++|+|++|+|+++|++++.+++||+|++.+  
T Consensus        13 ~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~--~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~--   88 (323)
T cd05282          13 VLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGS--RPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLG--   88 (323)
T ss_pred             eEEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCC--CCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeC--
Confidence            6788888999999999999999999999999887654321  134578999999999999999999999999999631  


Q ss_pred             CCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHHHh-cCCCCCCEE
Q 018075          105 SCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRR-ANVGPETNV  182 (361)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l~~-~~~~~g~~v  182 (361)
                                                ..|+|++|+.++.+.++++|+++++.+++.+ ....+||+++.. ..+++|++|
T Consensus        89 --------------------------~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~v  142 (323)
T cd05282          89 --------------------------GEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWV  142 (323)
T ss_pred             --------------------------CCCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEE
Confidence                                      1589999999999999999999998888754 467788888755 678999999


Q ss_pred             EEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccCC
Q 018075          183 MIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGF  261 (361)
Q Consensus       183 lI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~  261 (361)
                      ||+|+ |.+|++++++|+.+|+ .++++..++++.+.++++|++.++++..  .++...+.+.  +.+.++|++||++|+
T Consensus       143 lI~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~--~~~~~~d~vl~~~g~  217 (323)
T cd05282         143 IQNAANSAVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSSP--EDLAQRVKEA--TGGAGARLALDAVGG  217 (323)
T ss_pred             EEcccccHHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEecccc--hhHHHHHHHH--hcCCCceEEEECCCC
Confidence            99985 8999999999999999 5677778888888999999988776532  3444444433  235789999999998


Q ss_pred             hHHHHHHHHhhcCCCEEEEEccCCCC-cceechHhhhcCcEEEEeecC-----------CCcHHHHHHHHHcCCCCCCCc
Q 018075          262 DKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY-----------RSTWPLCIEFLRSGKIDVKPL  329 (361)
Q Consensus       262 ~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-----------~~~~~~~~~~l~~g~~~~~~~  329 (361)
                      . .....+++++++|+++.+|..... ..++...+..++.++.+....           .+.++++++++.+|.+.  +.
T Consensus       218 ~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~--~~  294 (323)
T cd05282         218 E-SATRLARSLRPGGTLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLT--TP  294 (323)
T ss_pred             H-HHHHHHHhhCCCCEEEEEccCCCCCCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcc--cC
Confidence            7 678899999999999999865442 233333444477888776543           13577899999999984  44


Q ss_pred             eEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075          330 ITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  360 (361)
Q Consensus       330 ~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~  360 (361)
                      ..+.|++  ++++++++.+.++...+|++++
T Consensus       295 ~~~~~~~--~~~~~a~~~~~~~~~~~kvv~~  323 (323)
T cd05282         295 VGAKFPL--EDFEEAVAAAEQPGRGGKVLLT  323 (323)
T ss_pred             ccceecH--HHHHHHHHHHhcCCCCceEeeC
Confidence            5677888  9999999999998888999874

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=100.00  E-value=8.3e-34  Score=260.10  Aligned_cols=308  Identities=19%  Similarity=0.251  Sum_probs=234.7

Q ss_pred             ceEEEEeeCC---ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCC
Q 018075           15 NMAAWLLGIK---TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS   91 (361)
Q Consensus        15 ~~~~~~~~~~---~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   91 (361)
                      |+++++.+++   ++++++.|.|.+++++|+|+|.++++|++|+....|...  .....|.++|||++|+|+++  +++.
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~--~~~~~~~~~g~e~~G~v~~~--~~~~   76 (325)
T cd05280           1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGG--VTRNYPHTPGIDAAGTVVSS--DDPR   76 (325)
T ss_pred             CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCC--CCCCCCCccCcccEEEEEEe--CCCC
Confidence            3566666554   799999999999999999999999999999988776531  12345789999999999999  4567


Q ss_pred             CCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccc-hhHHHHHH
Q 018075           92 LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHA  170 (361)
Q Consensus        92 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-~~~~a~~~  170 (361)
                      +++||+|++.+.                     ++ +....|+|++|+.++++.++++|+++++++|+.+. .+.+|+.+
T Consensus        77 ~~~Gd~V~~~~~---------------------~~-g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~  134 (325)
T cd05280          77 FREGDEVLVTGY---------------------DL-GMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALS  134 (325)
T ss_pred             CCCCCEEEEccc---------------------cc-CCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHH
Confidence            999999987321                     00 11236899999999999999999999999988664 66778887


Q ss_pred             HHh---cCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHH
Q 018075          171 CRR---ANVG-PETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       171 l~~---~~~~-~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~  245 (361)
                      ++.   ..+. .+++|||+|+ |++|++++++|+.+|++ |+.++.++++.+.++++|++.+++...  . .....+   
T Consensus       135 l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~--~-~~~~~~---  207 (325)
T cd05280         135 VHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGYT-VVALTGKEEQADYLKSLGASEVLDRED--L-LDESKK---  207 (325)
T ss_pred             HHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHhcCCcEEEcchh--H-HHHHHH---
Confidence            754   2335 3579999995 99999999999999994 888889999999999999988765321  1 111111   


Q ss_pred             hhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC-CcceechHhhhcCcEEEEeecC---C----CcHHHHHH
Q 018075          246 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRY---R----STWPLCIE  317 (361)
Q Consensus       246 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~---~----~~~~~~~~  317 (361)
                      ...+.++|++||++++. .+...+++++++|+++.+|.... ...+....++.++.++.+....   +    +.++.+.+
T Consensus       208 ~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (325)
T cd05280         208 PLLKARWAGAIDTVGGD-VLANLLKQTKYGGVVASCGNAAGPELTTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLAT  286 (325)
T ss_pred             HhcCCCccEEEECCchH-HHHHHHHhhcCCCEEEEEecCCCCccccccchheeeeeEEEEEEeecCchhHHHHHHHHHHH
Confidence            12345799999999975 89999999999999999986542 2233334455678888776543   1    22344555


Q ss_pred             HHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          318 FLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       318 ~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      ++..+..   +.+...|++  ++++++++.+.+++..||+|+++
T Consensus       287 ~~~~~~~---~~~~~~~~~--~~~~~a~~~~~~~~~~gk~vv~~  325 (325)
T cd05280         287 EWKPDLL---EIVVREISL--EELPEAIDRLLAGKHRGRTVVKI  325 (325)
T ss_pred             HHhcCCc---cceeeEecH--HHHHHHHHHHhcCCcceEEEEeC
Confidence            5566633   236678888  99999999999999999999875

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=100.00  E-value=1.6e-33  Score=258.04  Aligned_cols=305  Identities=20%  Similarity=0.287  Sum_probs=233.3

Q ss_pred             EEEEe---eCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCC
Q 018075           17 AAWLL---GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE   93 (361)
Q Consensus        17 ~~~~~---~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   93 (361)
                      ++++.   +|..++++++|.|.+.+++|+|||.++++|++|+....|...  .....|.++|+|++|+|++  .++..|+
T Consensus         2 a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~--~~~~~~~~~g~e~~G~V~~--~~~~~~~   77 (323)
T TIGR02823         2 ALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGG--VVRSYPMIPGIDAAGTVVS--SEDPRFR   77 (323)
T ss_pred             eEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCC--CCCCCCccceeeeEEEEEe--cCCCCCC
Confidence            45555   335789999999999999999999999999999988776432  1124588999999999998  5667899


Q ss_pred             CCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccc-hhHHHHHHHH
Q 018075           94 VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACR  172 (361)
Q Consensus        94 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-~~~~a~~~l~  172 (361)
                      +||+|++.+..                     . +....|+|++|+.++.+.++++|+++++++++.+. .+.+|+.+++
T Consensus        78 ~Gd~V~~~~~~---------------------~-~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~  135 (323)
T TIGR02823        78 EGDEVIVTGYG---------------------L-GVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVM  135 (323)
T ss_pred             CCCEEEEccCC---------------------C-CCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHH
Confidence            99999874210                     0 01236899999999999999999999999888664 5666776653


Q ss_pred             ---hcCCCCCC-EEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhh
Q 018075          173 ---RANVGPET-NVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       173 ---~~~~~~g~-~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~  247 (361)
                         +..+.+|+ +|||+|+ |++|++++++|+.+|++ +++++.++++.+.++++|++.+++...  .+  ..++.+   
T Consensus       136 ~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~--~~--~~~~~~---  207 (323)
T TIGR02823       136 ALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGYE-VVASTGKAEEEDYLKELGASEVIDRED--LS--PPGKPL---  207 (323)
T ss_pred             HhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCCe-EEEEeCCHHHHHHHHhcCCcEEEcccc--HH--HHHHHh---
Confidence               34588998 9999995 99999999999999995 666667777789999999987765321  11  122222   


Q ss_pred             cCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC-CcceechHhhhcCcEEEEeecC---C----CcHHHHHHHH
Q 018075          248 MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRY---R----STWPLCIEFL  319 (361)
Q Consensus       248 ~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~---~----~~~~~~~~~l  319 (361)
                      .+.++|++||++|+. .+...+++++++|+++.+|.... ........++.++.++.+....   .    ..++.+.+++
T Consensus       208 ~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (323)
T TIGR02823       208 EKERWAGAVDTVGGH-TLANVLAQLKYGGAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDL  286 (323)
T ss_pred             cCCCceEEEECccHH-HHHHHHHHhCCCCEEEEEcccCCCCccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHh
Confidence            234599999999976 78999999999999999986543 2222334455788888886532   1    1355666777


Q ss_pred             HcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          320 RSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       320 ~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      ..+.+.  +. .+.+++  +++++|++.+.+++..+|+++++
T Consensus       287 ~~~~~~--~~-~~~~~l--~~~~~a~~~~~~~~~~~k~vv~~  323 (323)
T TIGR02823       287 KPRNLE--SI-TREITL--EELPEALEQILAGQHRGRTVVDV  323 (323)
T ss_pred             hcCCCc--Cc-eeeecH--HHHHHHHHHHhCCCccceEEEeC
Confidence            788773  33 457888  99999999999999999999874

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=2.7e-33  Score=255.97  Aligned_cols=296  Identities=26%  Similarity=0.368  Sum_probs=233.2

Q ss_pred             CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCC
Q 018075           24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPG  103 (361)
Q Consensus        24 ~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~  103 (361)
                      ..+++++.+.|++.++||+|||+++++|+.|+....+...   ....|.++|+|++|+|+++|.  ..+++||+|++...
T Consensus        13 ~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~---~~~~~~~~g~e~~G~v~~vG~--~~~~~Gd~V~~~~~   87 (320)
T cd08243          13 EVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSP---SVKFPRVLGIEAVGEVEEAPG--GTFTPGQRVATAMG   87 (320)
T ss_pred             cceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCC---CCCCCccccceeEEEEEEecC--CCCCCCCEEEEecC
Confidence            4577888888889999999999999999999988766431   134578999999999999995  56999999987421


Q ss_pred             cCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHHHh-cCCCCCCE
Q 018075          104 ISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRR-ANVGPETN  181 (361)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l~~-~~~~~g~~  181 (361)
                      ..                      +...+|+|++|+.++.+.++++|+++++++++.+ .++.+||+++.. ..+++|++
T Consensus        88 ~~----------------------~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~  145 (320)
T cd08243          88 GM----------------------GRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDT  145 (320)
T ss_pred             CC----------------------CCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCE
Confidence            00                      0123689999999999999999999999888744 588999999866 67899999


Q ss_pred             EEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccC
Q 018075          182 VMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG  260 (361)
Q Consensus       182 vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  260 (361)
                      |||+|+ |++|++++|+|+.+|+ .++.++.++++.+.++++|++.++..   ..++.+.+.++    ++++|++||+++
T Consensus       146 vlV~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~---~~~~~~~i~~~----~~~~d~vl~~~~  217 (320)
T cd08243         146 LLIRGGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVID---DGAIAEQLRAA----PGGFDKVLELVG  217 (320)
T ss_pred             EEEEcCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEec---CccHHHHHHHh----CCCceEEEECCC
Confidence            999995 9999999999999999 57888888999999999999876542   23454444433    568999999999


Q ss_pred             ChHHHHHHHHhhcCCCEEEEEccCCCCcce---echHhh--hcCcEEEEeecC---CCcHHHHHHHHHcCCCCCCCceEE
Q 018075          261 FDKTMSTALNATRPGGKVCLIGLAKTEMTV---ALTPAA--AREVDVIGIFRY---RSTWPLCIEFLRSGKIDVKPLITH  332 (361)
Q Consensus       261 ~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~---~~~~~~--~~~~~i~~~~~~---~~~~~~~~~~l~~g~~~~~~~~~~  332 (361)
                      +. .+...+++++++|+++.+|........   ......  .++..+.++...   ...+++++++++++.+.  +...+
T Consensus       218 ~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  294 (320)
T cd08243         218 TA-TLKDSLRHLRPGGIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVPQTPLQELFDFVAAGHLD--IPPSK  294 (320)
T ss_pred             hH-HHHHHHHHhccCCEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhhhHHHHHHHHHHHHCCcee--ccccc
Confidence            75 899999999999999999864322111   111122  455666665433   23578899999999984  34557


Q ss_pred             EecCChhhHHHHHHHHhcCCCceEEEE
Q 018075          333 RFGFTQKEIEDAFEISAQGGNAIKVMF  359 (361)
Q Consensus       333 ~~~l~~~~~~~a~~~l~~~~~~gkvvi  359 (361)
                      .+++  +++++|++.+.++...+|+++
T Consensus       295 ~~~l--~~~~~a~~~~~~~~~~~kvvv  319 (320)
T cd08243         295 VFTF--DEIVEAHAYMESNRAFGKVVV  319 (320)
T ss_pred             EEcH--HHHHHHHHHHHhCCCCCcEEe
Confidence            7888  999999999999888889875

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=100.00  E-value=3.4e-33  Score=256.22  Aligned_cols=309  Identities=18%  Similarity=0.228  Sum_probs=230.0

Q ss_pred             eEEEEeeC---CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCC
Q 018075           16 MAAWLLGI---KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL   92 (361)
Q Consensus        16 ~~~~~~~~---~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   92 (361)
                      ++.++.++   ..+.+++.|.|.+.++||+||+.++++|++|.....+.  +......|.++|||++|+|+++|  +..|
T Consensus         2 ~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~--~~~~~~~~~~~g~e~~G~V~~~~--~~~~   77 (326)
T cd08289           2 QALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPG--GKIVKRYPFIPGIDLAGTVVESN--DPRF   77 (326)
T ss_pred             eeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCC--ccccCCCCcCcccceeEEEEEcC--CCCC
Confidence            44455543   35889999999999999999999999999998655321  11123458899999999999964  5679


Q ss_pred             CCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccc-hhHHHHHHH
Q 018075           93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC  171 (361)
Q Consensus        93 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-~~~~a~~~l  171 (361)
                      ++||+|++.+..                     + +....|+|++|+.++++.++++|+++++++++.+. .+.+|+.++
T Consensus        78 ~~Gd~V~~~~~~---------------------~-~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l  135 (326)
T cd08289          78 KPGDEVIVTSYD---------------------L-GVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSI  135 (326)
T ss_pred             CCCCEEEEcccc---------------------c-CCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHH
Confidence            999999874210                     0 11247999999999999999999999999988664 566777776


Q ss_pred             Hh---cCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHh
Q 018075          172 RR---ANVG-PETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN  246 (361)
Q Consensus       172 ~~---~~~~-~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~  246 (361)
                      +.   ..+. ++++|||+|+ |++|++++|+|+.+|+ .++++++++++.+.++++|++.+++...   ...+.+.++  
T Consensus       136 ~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~~---~~~~~~~~~--  209 (326)
T cd08289         136 HRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKEVIPREE---LQEESIKPL--  209 (326)
T ss_pred             HHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCEEEcchh---HHHHHHHhh--
Confidence            43   3334 4789999995 9999999999999999 5788888899999999999987766432   112223222  


Q ss_pred             hcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC-CcceechHhhhcCcEEEEeecC---CCcHHHHHHHHHcC
Q 018075          247 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRY---RSTWPLCIEFLRSG  322 (361)
Q Consensus       247 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~l~~g  322 (361)
                       .+.++|++||++|+. .+...+++++++|+++.+|.... ..+.....++.++.++.+....   ......+++.+.+ 
T Consensus       210 -~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  286 (326)
T cd08289         210 -EKQRWAGAVDPVGGK-TLAYLLSTLQYGGSVAVSGLTGGGEVETTVFPFILRGVNLLGIDSVECPMELRRRIWRRLAT-  286 (326)
T ss_pred             -ccCCcCEEEECCcHH-HHHHHHHHhhcCCEEEEEeecCCCCCCcchhhhhhccceEEEEEeEecCchHHHHHHHHHHh-
Confidence             356799999999975 89999999999999999996533 2233345566788888887432   1223334443332 


Q ss_pred             CCC---CCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          323 KID---VKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       323 ~~~---~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      .+.   ..+.+.+.|++  +++++|++.+.+++..||+|+++
T Consensus       287 ~~~~~~~~~~~~~~~~l--~~~~~a~~~~~~~~~~gkvvv~~  326 (326)
T cd08289         287 DLKPTQLLNEIKQEITL--DELPEALKQILQGRVTGRTVVKL  326 (326)
T ss_pred             hcCccccccccceEeeH--HHHHHHHHHHhcCcccceEEEeC
Confidence            221   12345788888  99999999999999999999874

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=100.00  E-value=2.6e-32  Score=251.42  Aligned_cols=306  Identities=20%  Similarity=0.278  Sum_probs=236.8

Q ss_pred             eEEEEeeCC------ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCC
Q 018075           16 MAAWLLGIK------TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEV   89 (361)
Q Consensus        16 ~~~~~~~~~------~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   89 (361)
                      ++.++.+++      .+++++++.|++.+++|+|++.++++|++|+....+...   ....|.++|+|++|+|+++|+++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~---~~~~~~~~g~e~~G~v~~~G~~v   78 (336)
T cd08252           2 KAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAP---VPGQPKILGWDASGVVEAVGSEV   78 (336)
T ss_pred             ceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCC---CCCCCcccccceEEEEEEcCCCC
Confidence            344555443      267778888889999999999999999999987665321   12457799999999999999999


Q ss_pred             CCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHH
Q 018075           90 KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGV  168 (361)
Q Consensus        90 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~  168 (361)
                      ..|++||+|++...                         ....|+|++|+.++.+.++++|+++++++++.+ ..+.+||
T Consensus        79 ~~~~~Gd~V~~~~~-------------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~  133 (336)
T cd08252          79 TLFKVGDEVYYAGD-------------------------ITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAW  133 (336)
T ss_pred             CCCCCCCEEEEcCC-------------------------CCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHH
Confidence            99999999986310                         113689999999999999999999999888755 3667788


Q ss_pred             HHHH-hcCCCC-----CCEEEEEC-CCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHH
Q 018075          169 HACR-RANVGP-----ETNVMIMG-SGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTD  240 (361)
Q Consensus       169 ~~l~-~~~~~~-----g~~vlI~G-~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~  240 (361)
                      +++. ...+++     |++|+|+| +|++|++++++|+.+| + .+++++.++++.++++++|++.+++..   .++...
T Consensus       134 ~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~  209 (336)
T cd08252         134 EALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKELGADHVINHH---QDLAEQ  209 (336)
T ss_pred             HHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHhcCCcEEEeCC---ccHHHH
Confidence            8874 477777     99999998 6999999999999999 7 688888889999999999998877643   244444


Q ss_pred             HHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC------------
Q 018075          241 VGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY------------  308 (361)
Q Consensus       241 ~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~------------  308 (361)
                      +..   ..+.++|++||++++...+..++++++++|+++.+|....  .++...+..++.++.+....            
T Consensus       210 i~~---~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (336)
T cd08252         210 LEA---LGIEPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQE--PLDLGPLKSKSASFHWEFMFTRSMFQTPDMIE  284 (336)
T ss_pred             HHh---hCCCCCCEEEEccCcHHHHHHHHHHhcCCCEEEEecCCCC--cccchhhhcccceEEEEEeeccccccccchhh
Confidence            432   2346899999999976689999999999999999985532  23333444566776654321            


Q ss_pred             -CCcHHHHHHHHHcCCCCCCCc-eEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075          309 -RSTWPLCIEFLRSGKIDVKPL-ITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  360 (361)
Q Consensus       309 -~~~~~~~~~~l~~g~~~~~~~-~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~  360 (361)
                       ...++++++++.+|.+.+... ..+.+++  +++++|++.+.++...+|++++
T Consensus       285 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~~vv~~  336 (336)
T cd08252         285 QHEILNEVADLLDAGKLKTTLTETLGPINA--ENLREAHALLESGKTIGKIVLE  336 (336)
T ss_pred             HHHHHHHHHHHHHCCCEecceeeeecCCCH--HHHHHHHHHHHcCCccceEEeC
Confidence             134678999999999853211 1133566  9999999999999889999874

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=100.00  E-value=2e-32  Score=251.37  Aligned_cols=292  Identities=20%  Similarity=0.205  Sum_probs=228.5

Q ss_pred             CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCC
Q 018075           24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPG  103 (361)
Q Consensus        24 ~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~  103 (361)
                      +.++++++|.|++.+++|+|||.++++|+.|.....+......+...+.++|+|++|+|+++|++  .+++||+|+.   
T Consensus        18 ~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~--~~~~Gd~V~~---   92 (329)
T cd05288          18 DDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP--DFKVGDLVSG---   92 (329)
T ss_pred             cceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC--CCCCCCEEec---
Confidence            56999999999999999999999999999886555432111111223568999999999999965  6999999985   


Q ss_pred             cCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecC-CceEECCCCCC--cccc-c-ccchhHHHHHHHHh-cCCC
Q 018075          104 ISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPA-KLCYKLPDNVS--LEEG-A-MCEPLSVGVHACRR-ANVG  177 (361)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~vP~~~~--~~~a-a-~~~~~~~a~~~l~~-~~~~  177 (361)
                                                  .++|++|+.++. +.++++|++++  +.++ + +..++.+||+++.. ..+.
T Consensus        93 ----------------------------~~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~  144 (329)
T cd05288          93 ----------------------------FLGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPK  144 (329)
T ss_pred             ----------------------------ccceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCC
Confidence                                        358999999999 99999999985  3333 3 44578899998865 7889


Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH-cCCCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      +|++|||+| +|++|++++++|+..|+ .++++++++++.+.+++ +|++.++++..  .++.+.+.++   .+.++|++
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~v~~~---~~~~~d~v  218 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWLVEELGFDAAINYKT--PDLAEALKEA---APDGIDVY  218 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhhcCCceEEecCC--hhHHHHHHHh---ccCCceEE
Confidence            999999998 69999999999999999 68888888999999888 99988776532  3444444433   24689999


Q ss_pred             EEccCChHHHHHHHHhhcCCCEEEEEccCCCCcc------eechHhhhcCcEEEEeecC------CCcHHHHHHHHHcCC
Q 018075          256 FDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMT------VALTPAAAREVDVIGIFRY------RSTWPLCIEFLRSGK  323 (361)
Q Consensus       256 ld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~------~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~l~~g~  323 (361)
                      ||++|+. .++.++++++++|+++.+|.......      ......+.++.++.+....      .+.+.++++++.+|.
T Consensus       219 i~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  297 (329)
T cd05288         219 FDNVGGE-ILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGK  297 (329)
T ss_pred             EEcchHH-HHHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCC
Confidence            9999975 89999999999999999985443211      1233456777888776543      245778899999999


Q ss_pred             CCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 018075          324 IDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF  359 (361)
Q Consensus       324 ~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi  359 (361)
                      +++.+  ...+++  ++++++++.+.+++..+|+++
T Consensus       298 i~~~~--~~~~~l--~~~~~a~~~~~~~~~~gkvvv  329 (329)
T cd05288         298 LKYRE--DVVEGL--ENAPEAFLGLFTGKNTGKLVV  329 (329)
T ss_pred             ccccc--cccccH--HHHHHHHHHHhcCCCccceeC
Confidence            85443  344677  999999999998888888874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=100.00  E-value=5.4e-32  Score=247.48  Aligned_cols=303  Identities=29%  Similarity=0.433  Sum_probs=240.8

Q ss_pred             CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCC
Q 018075           24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPG  103 (361)
Q Consensus        24 ~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~  103 (361)
                      +.++++++|.|.+.+++|+|++.++++|++|+....|....  ....|+++|||++|+|+++|+++..|++||+|++.+.
T Consensus        13 ~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~v~~~~~   90 (325)
T cd08253          13 DVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPG--LPPLPYVPGSDGAGVVEAVGEGVDGLKVGDRVWLTNL   90 (325)
T ss_pred             ccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCC--CCCCCeecccceEEEEEeeCCCCCCCCCCCEEEEecc
Confidence            45889999999999999999999999999999877664321  2356889999999999999999999999999997421


Q ss_pred             cCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHHHh-cCCCCCCE
Q 018075          104 ISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRR-ANVGPETN  181 (361)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l~~-~~~~~g~~  181 (361)
                      .                    +   ....|+|++|+.++.+.++++|+++++++++.+ .++.+|++.+.. .++++|++
T Consensus        91 ~--------------------~---~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~  147 (325)
T cd08253          91 G--------------------W---GRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGET  147 (325)
T ss_pred             c--------------------c---CCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCE
Confidence            0                    0   013689999999999999999999999888755 578889998865 88999999


Q ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccC
Q 018075          182 VMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG  260 (361)
Q Consensus       182 vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  260 (361)
                      ++|+| +|++|++++++++..|+ .++.++.++++.+.++++|++.+++..  ..++.+.+.++.  .+.++|+++++.+
T Consensus       148 vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~--~~~~~d~vi~~~~  222 (325)
T cd08253         148 VLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFNYR--AEDLADRILAAT--AGQGVDVIIEVLA  222 (325)
T ss_pred             EEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCC--CcCHHHHHHHHc--CCCceEEEEECCc
Confidence            99998 59999999999999999 578888888999999999988776643  234444444332  2468999999999


Q ss_pred             ChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-------CCcHHHHHHHHHcCCCCCCCceEEE
Q 018075          261 FDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-------RSTWPLCIEFLRSGKIDVKPLITHR  333 (361)
Q Consensus       261 ~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-------~~~~~~~~~~l~~g~~~~~~~~~~~  333 (361)
                      +. .....+++++++|+++.++.......+....++.++.++.+...+       .+.++.+.+++.++.+  .+...+.
T Consensus       223 ~~-~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--~~~~~~~  299 (325)
T cd08253         223 NV-NLAKDLDVLAPGGRIVVYGSGGLRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGAL--RPVIARE  299 (325)
T ss_pred             hH-HHHHHHHhhCCCCEEEEEeecCCcCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCc--cCccccE
Confidence            76 788899999999999999865432234444445666666665433       2245667778888887  4445677


Q ss_pred             ecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          334 FGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       334 ~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      +++  ++++++++.+.++...+|+++++
T Consensus       300 ~~~--~~~~~~~~~~~~~~~~~kvv~~~  325 (325)
T cd08253         300 YPL--EEAAAAHEAVESGGAIGKVVLDP  325 (325)
T ss_pred             EcH--HHHHHHHHHHHcCCCcceEEEeC
Confidence            888  99999999999998899999864

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=100.00  E-value=8e-32  Score=246.91  Aligned_cols=306  Identities=21%  Similarity=0.254  Sum_probs=234.0

Q ss_pred             eEEEEeeCC---ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCC
Q 018075           16 MAAWLLGIK---TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL   92 (361)
Q Consensus        16 ~~~~~~~~~---~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   92 (361)
                      ++.++.+++   .++++++|.|+|+++||+|+|.++++|++|+....|...  .....|.++|+|++|+|++  ++++++
T Consensus         2 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~--~~~~~~~~~g~e~~G~V~~--~~~~~~   77 (324)
T cd08288           2 KALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGG--IVRTFPLVPGIDLAGTVVE--SSSPRF   77 (324)
T ss_pred             eeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCcc--ccCCCCCccccceEEEEEe--CCCCCC
Confidence            455555544   699999999999999999999999999999987766431  1124578899999999999  777889


Q ss_pred             CCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccc-hhHHHHHHH
Q 018075           93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC  171 (361)
Q Consensus        93 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-~~~~a~~~l  171 (361)
                      ++||+|++....                     . ....+|+|++|+.++.+.++++|+++++++++.+. .+.+++.++
T Consensus        78 ~~Gd~V~~~~~~---------------------~-~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~  135 (324)
T cd08288          78 KPGDRVVLTGWG---------------------V-GERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCV  135 (324)
T ss_pred             CCCCEEEECCcc---------------------C-CCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHH
Confidence            999999973100                     0 00136899999999999999999999998888554 566666555


Q ss_pred             H---hcCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHh
Q 018075          172 R---RANVG-PETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN  246 (361)
Q Consensus       172 ~---~~~~~-~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~  246 (361)
                      +   ..... +|++|||+|+ |++|++++|+|+.+|+ .+++++.++++.++++++|++.++++..    ....+..+  
T Consensus       136 ~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~--  208 (324)
T cd08288         136 MALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASEIIDRAE----LSEPGRPL--  208 (324)
T ss_pred             HHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCEEEEcch----hhHhhhhh--
Confidence            3   44555 6789999995 9999999999999999 5777778889999999999988877532    22222222  


Q ss_pred             hcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC-CcceechHhhhcCcEEEEeecC-------CCcHHHHHHH
Q 018075          247 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRY-------RSTWPLCIEF  318 (361)
Q Consensus       247 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-------~~~~~~~~~~  318 (361)
                       ...++|.++|++++. .....+..++.+|+++.+|.... ........+..++.++.+....       .+.+..++++
T Consensus       209 -~~~~~~~~~d~~~~~-~~~~~~~~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (324)
T cd08288         209 -QKERWAGAVDTVGGH-TLANVLAQTRYGGAVAACGLAGGADLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARD  286 (324)
T ss_pred             -ccCcccEEEECCcHH-HHHHHHHHhcCCCEEEEEEecCCCCCCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHH
Confidence             245689999999964 77888899999999999986432 1123334444778888886432       2246667788


Q ss_pred             HHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          319 LRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       319 l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      +.++.+  ++. .+.+++  +++++|++.+.+++..+|+++++
T Consensus       287 ~~~~~~--~~i-~~~~~~--~~~~~a~~~~~~~~~~~~vvv~~  324 (324)
T cd08288         287 LDPALL--EAL-TREIPL--ADVPDAAEAILAGQVRGRVVVDV  324 (324)
T ss_pred             HhcCCc--ccc-ceeecH--HHHHHHHHHHhcCCccCeEEEeC
Confidence            888877  332 577888  99999999999999999999874

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=100.00  E-value=1.1e-31  Score=245.24  Aligned_cols=304  Identities=27%  Similarity=0.394  Sum_probs=241.1

Q ss_pred             eEEEEee---CCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCC
Q 018075           16 MAAWLLG---IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL   92 (361)
Q Consensus        16 ~~~~~~~---~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   92 (361)
                      ++.++.+   ++.+++++.+.|.+.+++|+|||.++++|+.|+....+...  .....|.++|+|++|+|+++|+++..+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~--~~~~~~~~~g~e~~G~v~~vg~~~~~~   79 (323)
T cd05276           2 KAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYP--PPPGASDILGLEVAGVVVAVGPGVTGW   79 (323)
T ss_pred             eEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCC--CCCCCCCcccceeEEEEEeeCCCCCCC
Confidence            5555554   45688888888888999999999999999999987765331  123457899999999999999999999


Q ss_pred             CCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHH
Q 018075           93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHAC  171 (361)
Q Consensus        93 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l  171 (361)
                      ++||+|++.                            ..+|+|++|+.++.+.++++|+++++.+++.+ .++.++++++
T Consensus        80 ~~Gd~V~~~----------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~  131 (323)
T cd05276          80 KVGDRVCAL----------------------------LAGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNL  131 (323)
T ss_pred             CCCCEEEEe----------------------------cCCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHH
Confidence            999999862                            12589999999999999999999998888755 5788899987


Q ss_pred             Hh-cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcC
Q 018075          172 RR-ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       172 ~~-~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      .. ..+.++++++|+| +|++|++++++++..|+ .++.++.++++.+.++++|++.+++...  .++...+.+..  .+
T Consensus       132 ~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~--~~  206 (323)
T cd05276         132 FQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAINYRT--EDFAEEVKEAT--GG  206 (323)
T ss_pred             HHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCc--hhHHHHHHHHh--CC
Confidence            65 7889999999999 59999999999999999 5788888888898889999877665432  34444444332  24


Q ss_pred             CCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC-CcceechHhhhcCcEEEEeecCC-----------CcHHHHHH
Q 018075          250 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRYR-----------STWPLCIE  317 (361)
Q Consensus       250 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~-----------~~~~~~~~  317 (361)
                      .++|+++|+.|+. .+...++++.++|+++.++..+. ........++.++.++.++....           ..+.++++
T Consensus       207 ~~~d~vi~~~g~~-~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (323)
T cd05276         207 RGVDVILDMVGGD-YLARNLRALAPDGRLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWP  285 (323)
T ss_pred             CCeEEEEECCchH-HHHHHHHhhccCCEEEEEecCCCCCCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHH
Confidence            6899999999976 68889999999999999986432 22333444456788888765431           23567888


Q ss_pred             HHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 018075          318 FLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF  359 (361)
Q Consensus       318 ~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi  359 (361)
                      ++.++++  .+..++.|++  ++++++++.+.++...+|+++
T Consensus       286 ~~~~~~~--~~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~  323 (323)
T cd05276         286 LFASGRI--RPVIDKVFPL--EEAAEAHRRMESNEHIGKIVL  323 (323)
T ss_pred             HHHCCCc--cCCcceEEcH--HHHHHHHHHHHhCCCcceEeC
Confidence            9999988  4456678888  999999999998888888874

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=100.00  E-value=1.7e-32  Score=254.04  Aligned_cols=296  Identities=25%  Similarity=0.355  Sum_probs=225.3

Q ss_pred             eEEEEecCCCC-CCCcEEEEEeeeecCcchhhhhcccccc-------c-----ccCCCCcccCcceeEEEEEeCCCCCCC
Q 018075           26 LKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKTMRCA-------N-----FIVKKPMVIGHECAGIIEEVGSEVKSL   92 (361)
Q Consensus        26 l~~~~~~~p~~-~~~eVlV~v~~~~l~~~D~~~~~g~~~~-------~-----~~~~~p~~~G~e~~G~V~~vG~~v~~~   92 (361)
                      +++++.+.|+| +++||+|+|.++++|++|+....|...+       .     .....|.++|+|++|+|+++|++++++
T Consensus        16 ~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~v~~vG~~v~~~   95 (350)
T cd08248          16 LLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRDCSGVVVDIGSGVKSF   95 (350)
T ss_pred             eeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecceeEEEEEecCCCcccC
Confidence            89999999999 5999999999999999999887763210       0     023568899999999999999999999


Q ss_pred             CCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHH
Q 018075           93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHAC  171 (361)
Q Consensus        93 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l  171 (361)
                      ++||+|++.+.                         ....|+|++|+.++.+.++++|+++++++++.+ ..+.+||+++
T Consensus        96 ~~Gd~V~~~~~-------------------------~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l  150 (350)
T cd08248          96 EIGDEVWGAVP-------------------------PWSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSAL  150 (350)
T ss_pred             CCCCEEEEecC-------------------------CCCCccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHH
Confidence            99999987321                         113689999999999999999999999888755 4788899988


Q ss_pred             Hh-cCCC----CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHH
Q 018075          172 RR-ANVG----PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       172 ~~-~~~~----~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~  245 (361)
                      .. ..+.    +|++|+|+| +|++|++++++|+.+|++ ++++..+ ++.+.++++|++.+++...  .++...   +.
T Consensus       151 ~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~-v~~~~~~-~~~~~~~~~g~~~~~~~~~--~~~~~~---l~  223 (350)
T cd08248         151 VNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAH-VTTTCST-DAIPLVKSLGADDVIDYNN--EDFEEE---LT  223 (350)
T ss_pred             HHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCCe-EEEEeCc-chHHHHHHhCCceEEECCC--hhHHHH---HH
Confidence            55 5564    499999998 699999999999999995 6666554 6778889999887766432  233333   22


Q ss_pred             hhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCc----ce----echHhhhc---------CcEEEEe--e
Q 018075          246 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM----TV----ALTPAAAR---------EVDVIGI--F  306 (361)
Q Consensus       246 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~----~~----~~~~~~~~---------~~~i~~~--~  306 (361)
                      .  ..++|++||++|+. .....+++++++|+++.+|......    ..    ....+.+.         ...+...  .
T Consensus       224 ~--~~~vd~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (350)
T cd08248         224 E--RGKFDVILDTVGGD-TEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFS  300 (350)
T ss_pred             h--cCCCCEEEECCChH-HHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEEEC
Confidence            2  35799999999977 8999999999999999998543110    01    00111111         1111111  1


Q ss_pred             cCCCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075          307 RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  360 (361)
Q Consensus       307 ~~~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~  360 (361)
                      .....+.++++++.+|.+  .+.+++.|++  ++++++++.+.++...+|++++
T Consensus       301 ~~~~~~~~~~~~~~~g~~--~~~~~~~~~~--~~~~~a~~~~~~~~~~~~vv~~  350 (350)
T cd08248         301 PSGSALDELAKLVEDGKI--KPVIDKVFPF--EEVPEAYEKVESGHARGKTVIK  350 (350)
T ss_pred             CCHHHHHHHHHHHhCCCE--ecccceeecH--HHHHHHHHHHhcCCCceEEEeC
Confidence            124568899999999988  4446678888  9999999999988888898874

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=8e-32  Score=247.63  Aligned_cols=291  Identities=26%  Similarity=0.340  Sum_probs=227.2

Q ss_pred             CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCC
Q 018075           24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPG  103 (361)
Q Consensus        24 ~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~  103 (361)
                      .++++++.+.|.|.+++|+|++.++++|++|+....|....  ....|+++|+|++|+|+.+|+++..|++||+|++.+ 
T Consensus        13 ~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~-   89 (331)
T cd08273          13 EVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPD--QPPLPFTPGYDLVGRVDALGSGVTGFEVGDRVAALT-   89 (331)
T ss_pred             ccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCC--CCCCCcccccceEEEEEEeCCCCccCCCCCEEEEeC-
Confidence            57999999999999999999999999999999887664321  124688999999999999999999999999998631 


Q ss_pred             cCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHHHh-cCCCCCCE
Q 018075          104 ISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRR-ANVGPETN  181 (361)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l~~-~~~~~g~~  181 (361)
                                                 ..|+|++|+.++.+.++++|+++++++++.+ .++.+||+++.. .++++|++
T Consensus        90 ---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~  142 (331)
T cd08273          90 ---------------------------RVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQR  142 (331)
T ss_pred             ---------------------------CCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCE
Confidence                                       1489999999999999999999999888744 578889998865 78999999


Q ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccC
Q 018075          182 VMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG  260 (361)
Q Consensus       182 vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  260 (361)
                      ++|+| +|++|++++++|+..|+ .++.++. +++.++++++|+..+ +.  ...++...  ..   .++++|++|++++
T Consensus       143 vlI~g~~g~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~~-~~--~~~~~~~~--~~---~~~~~d~vl~~~~  212 (331)
T cd08273         143 VLIHGASGGVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATPI-DY--RTKDWLPA--ML---TPGGVDVVFDGVG  212 (331)
T ss_pred             EEEECCCcHHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeEE-cC--CCcchhhh--hc---cCCCceEEEECCc
Confidence            99999 59999999999999999 5777766 888899999997543 32  22233222  12   2458999999999


Q ss_pred             ChHHHHHHHHhhcCCCEEEEEccCCCCcceech--------------Hhh--hcCcEEEEeecC--------CCcHHHHH
Q 018075          261 FDKTMSTALNATRPGGKVCLIGLAKTEMTVALT--------------PAA--AREVDVIGIFRY--------RSTWPLCI  316 (361)
Q Consensus       261 ~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~--------------~~~--~~~~~i~~~~~~--------~~~~~~~~  316 (361)
                      +. ....++++++++|+++.+|...........              ...  .+.....+....        .+.++.++
T Consensus       213 ~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  291 (331)
T cd08273         213 GE-SYEESYAALAPGGTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELL  291 (331)
T ss_pred             hH-HHHHHHHHhcCCCEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHHHH
Confidence            87 689999999999999999865432111100              011  122222222111        34678899


Q ss_pred             HHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 018075          317 EFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF  359 (361)
Q Consensus       317 ~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi  359 (361)
                      +++++|.+  .+...+.+++  ++++++++.+.++...||+|+
T Consensus       292 ~~~~~~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~gkvv~  330 (331)
T cd08273         292 DLLAKGKI--RPKIAKRLPL--SEVAEAHRLLESGKVVGKIVL  330 (331)
T ss_pred             HHHHCCCc--cCCcceEEcH--HHHHHHHHHHHcCCCcceEEe
Confidence            99999998  4456677888  999999999999888889885

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.5e-31  Score=244.84  Aligned_cols=306  Identities=28%  Similarity=0.366  Sum_probs=237.9

Q ss_pred             eEEEEeeC---CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCC
Q 018075           16 MAAWLLGI---KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL   92 (361)
Q Consensus        16 ~~~~~~~~---~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   92 (361)
                      +++++.++   +.+++++.+.|.+.+++|+|+|.++++|++|+....+...  .....|.++|+|++|+|+++|++++.|
T Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~--~~~~~~~~~g~e~~G~v~~~G~~~~~~   79 (326)
T cd08272           2 KALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAA--ARPPLPAILGCDVAGVVEAVGEGVTRF   79 (326)
T ss_pred             eEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCC--CCCCCCcccccceeEEEEEeCCCCCCC
Confidence            56666644   3488889888889999999999999999999988765432  113457899999999999999999999


Q ss_pred             CCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHH
Q 018075           93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHAC  171 (361)
Q Consensus        93 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l  171 (361)
                      ++||+|++...           +            .....|+|++|+.++.+.++++|+++++..++.+ ..+.+||+++
T Consensus        80 ~~Gd~V~~~~~-----------~------------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l  136 (326)
T cd08272          80 RVGDEVYGCAG-----------G------------LGGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGL  136 (326)
T ss_pred             CCCCEEEEccC-----------C------------cCCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHH
Confidence            99999986320           0            0013689999999999999999999999888755 4678888887


Q ss_pred             H-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcC
Q 018075          172 R-RANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       172 ~-~~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      . ..++++|++++|+| +|++|++++++++.+|+ .++.++.+ ++.+.++++|.+.+++...  . +.+.+.++.  .+
T Consensus       137 ~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~--~-~~~~~~~~~--~~  209 (326)
T cd08272         137 VDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPIIYYRE--T-VVEYVAEHT--GG  209 (326)
T ss_pred             HHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEEEecch--h-HHHHHHHhc--CC
Confidence            4 48899999999998 69999999999999999 46777777 8888889999877665322  2 444444332  35


Q ss_pred             CCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC------------CCcHHHHHH
Q 018075          250 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY------------RSTWPLCIE  317 (361)
Q Consensus       250 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~------------~~~~~~~~~  317 (361)
                      .++|+++|++++. .....+++++++|+++.++... .  ..+.....++..+.+....            .+.+..+++
T Consensus       210 ~~~d~v~~~~~~~-~~~~~~~~l~~~g~~v~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (326)
T cd08272         210 RGFDVVFDTVGGE-TLDASFEAVALYGRVVSILGGA-T--HDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAAR  285 (326)
T ss_pred             CCCcEEEECCChH-HHHHHHHHhccCCEEEEEecCC-c--cchhhHhhhcceEEEEEcccccccccchhhHHHHHHHHHH
Confidence            6899999999975 7888999999999999987553 1  1222233566666655421            235777888


Q ss_pred             HHHcCCCCCCCceE-EEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          318 FLRSGKIDVKPLIT-HRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       318 ~l~~g~~~~~~~~~-~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      ++.++.+.  +.++ +.|++  ++++++++.+.++...+|+++++
T Consensus       286 ~l~~~~l~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~vv~~~  326 (326)
T cd08272         286 LVERGQLR--PLLDPRTFPL--EEAAAAHARLESGSARGKIVIDV  326 (326)
T ss_pred             HHHCCCcc--cccccceecH--HHHHHHHHHHHcCCcccEEEEEC
Confidence            99999883  3333 67888  99999999999888889999875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=100.00  E-value=1.4e-31  Score=248.25  Aligned_cols=315  Identities=20%  Similarity=0.268  Sum_probs=227.1

Q ss_pred             eEEEEeeC-CceEEEEecCCCC---CCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCC-
Q 018075           16 MAAWLLGI-KTLKIQPYHLPTL---GPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVK-   90 (361)
Q Consensus        16 ~~~~~~~~-~~l~~~~~~~p~~---~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~-   90 (361)
                      ++.++.++ +.++++.++.|.|   .+++|+||+.++++|++|+....+...  .....|.++|+|++|+|+++|++++ 
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~--~~~~~~~~~g~e~~G~V~~vG~~v~~   79 (352)
T cd08247           2 KALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTF--HFKVKEKGLGRDYSGVIVKVGSNVAS   79 (352)
T ss_pred             ceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhccccc--ccccCCCccCceeEEEEEEeCccccc
Confidence            34555555 4566666555544   899999999999999999887643211  1112377899999999999999998 


Q ss_pred             CCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCC----ceEECCCCCCccccccc-chhH
Q 018075           91 SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAK----LCYKLPDNVSLEEGAMC-EPLS  165 (361)
Q Consensus        91 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~~vP~~~~~~~aa~~-~~~~  165 (361)
                      .|++||+|++.....                       ....|+|++|++++..    .++++|+++++++++.+ ..+.
T Consensus        80 ~~~~Gd~V~~~~~~~-----------------------~~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~  136 (352)
T cd08247          80 EWKVGDEVCGIYPHP-----------------------YGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLG  136 (352)
T ss_pred             CCCCCCEEEEeecCC-----------------------CCCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHH
Confidence            899999998742111                       1136899999999988    78999999999998865 4677


Q ss_pred             HHHHHHHh-c-CCCCCCEEEEECC-CHHHHHHHHHHHHcCC-CEEEEEeCChhHHHHHHHcCCCEEeecCCCcc-chhHH
Q 018075          166 VGVHACRR-A-NVGPETNVMIMGS-GPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARNLGADETAKVSTDIE-DVDTD  240 (361)
Q Consensus       166 ~a~~~l~~-~-~~~~g~~vlI~G~-g~~G~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~-~~~~~  240 (361)
                      +||++++. . .+++|++++|+|+ |.+|++++++|+..|. +.++.++. +++.+.++++|++.+++...... .+...
T Consensus       137 ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~~-~~~~~~~~~~g~~~~i~~~~~~~~~~~~~  215 (352)
T cd08247         137 TAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTCS-SRSAELNKKLGADHFIDYDAHSGVKLLKP  215 (352)
T ss_pred             HHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEeC-hhHHHHHHHhCCCEEEecCCCcccchHHH
Confidence            89999876 4 6999999999985 7999999999999854 35666654 55556778999988776533210 02222


Q ss_pred             HHHHHhhcCCCccEEEEccCChHHHHHHHHhhc---CCCEEEEEc-cCCCCcc-----------e----echHhhhcCcE
Q 018075          241 VGKIQNAMGSGIDVSFDCVGFDKTMSTALNATR---PGGKVCLIG-LAKTEMT-----------V----ALTPAAAREVD  301 (361)
Q Consensus       241 ~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~---~~G~~v~~g-~~~~~~~-----------~----~~~~~~~~~~~  301 (361)
                      +.+.. ..+.++|++|||+|+......++++++   ++|+++.++ .......           .    ......+...+
T Consensus       216 ~~~~~-~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (352)
T cd08247         216 VLENV-KGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYN  294 (352)
T ss_pred             HHHhh-cCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcc
Confidence            21111 125689999999998558889999999   999999874 2211100           0    01112233334


Q ss_pred             EEEeecC--CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          302 VIGIFRY--RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       302 i~~~~~~--~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      +......  .+.++++++++.++.+  .+...+.+++  +++++|++.+.+++..||+++++
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~l--~~~~~a~~~~~~~~~~gkvvi~~  352 (352)
T cd08247         295 YQFFLLDPNADWIEKCAELIADGKV--KPPIDSVYPF--EDYKEAFERLKSNRAKGKVVIKV  352 (352)
T ss_pred             eEEEEecCCHHHHHHHHHHHhCCCe--EeeeccEecH--HHHHHHHHHHHcCCCCCcEEEeC
Confidence            3332211  2457889999999988  4446678888  99999999999998899999875

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.5e-31  Score=244.97  Aligned_cols=308  Identities=24%  Similarity=0.310  Sum_probs=236.9

Q ss_pred             ceEEEEeeCC---ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCC
Q 018075           15 NMAAWLLGIK---TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS   91 (361)
Q Consensus        15 ~~~~~~~~~~---~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   91 (361)
                      |++.++.+++   .+++++.|.|.+.+++|+|||.++++|++|+....+....   ...|.++|||++|+|+.+|+++++
T Consensus         1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~---~~~~~~~g~e~~G~v~~~G~~~~~   77 (325)
T cd08271           1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPA---WSYPHVPGVDGAGVVVAVGAKVTG   77 (325)
T ss_pred             CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC---CCCCcccccceEEEEEEeCCCCCc
Confidence            3556666777   8999999999999999999999999999999877654311   233778999999999999999999


Q ss_pred             CCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHH
Q 018075           92 LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHA  170 (361)
Q Consensus        92 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~  170 (361)
                      +++||+|++.+.                         ....|+|++|+.++.+.++++|+++++.+++.+ .++.+|+++
T Consensus        78 ~~~Gd~V~~~~~-------------------------~~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~  132 (325)
T cd08271          78 WKVGDRVAYHAS-------------------------LARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQA  132 (325)
T ss_pred             CCCCCEEEeccC-------------------------CCCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHH
Confidence            999999997321                         113689999999999999999999999888755 578889999


Q ss_pred             HHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhc
Q 018075          171 CRR-ANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       171 l~~-~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      ++. +++++|++++|+|+ |++|++++++++..|++ ++.+. ++++.+.++++|++.+++.  ...++...+....  .
T Consensus       133 ~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~~-v~~~~-~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~--~  206 (325)
T cd08271         133 LFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLR-VITTC-SKRNFEYVKSLGADHVIDY--NDEDVCERIKEIT--G  206 (325)
T ss_pred             HHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCE-EEEEE-cHHHHHHHHHcCCcEEecC--CCccHHHHHHHHc--C
Confidence            865 78899999999995 89999999999999995 55555 6677788888998776653  2234444444332  3


Q ss_pred             CCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCc--ceechHhhhcCcEEEEeecC---------CCcHHHHHH
Q 018075          249 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM--TVALTPAAAREVDVIGIFRY---------RSTWPLCIE  317 (361)
Q Consensus       249 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~--~~~~~~~~~~~~~i~~~~~~---------~~~~~~~~~  317 (361)
                      +.++|++++++++. .....+++++++|+++.++......  ........++.+++.+....         .+.+.++++
T Consensus       207 ~~~~d~vi~~~~~~-~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (325)
T cd08271         207 GRGVDAVLDTVGGE-TAAALAPTLAFNGHLVCIQGRPDASPDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLE  285 (325)
T ss_pred             CCCCcEEEECCCcH-hHHHHHHhhccCCEEEEEcCCCCCcchhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHH
Confidence            56799999999986 6677999999999999986433211  11112233344444443222         123567889


Q ss_pred             HHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          318 FLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       318 ~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      +++++.+.  +...+.|++  +++.++++.+.++...+|+++++
T Consensus       286 ~~~~~~i~--~~~~~~~~~--~~~~~a~~~~~~~~~~~kiv~~~  325 (325)
T cd08271         286 LLAAGKLE--PLVIEVLPF--EQLPEALRALKDRHTRGKIVVTI  325 (325)
T ss_pred             HHHCCCee--eccceEEcH--HHHHHHHHHHHcCCccceEEEEC
Confidence            99999884  445577888  99999999999988889999874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=5.1e-31  Score=240.39  Aligned_cols=295  Identities=28%  Similarity=0.355  Sum_probs=234.3

Q ss_pred             CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCC
Q 018075           24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPG  103 (361)
Q Consensus        24 ~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~  103 (361)
                      ..+.+++.+.|.+.+++|+|+|.++++|+.|+....+...    ...|.++|+|++|+|+.+|++++++++||+|++.. 
T Consensus        12 ~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~----~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~-   86 (320)
T cd05286          12 EVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYP----LPLPFVLGVEGAGVVEAVGPGVTGFKVGDRVAYAG-   86 (320)
T ss_pred             cceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCC----CCCCccCCcceeEEEEEECCCCCCCCCCCEEEEec-
Confidence            4577888887778999999999999999999987765431    24577899999999999999999999999998621 


Q ss_pred             cCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHHHh-cCCCCCCE
Q 018075          104 ISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRR-ANVGPETN  181 (361)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l~~-~~~~~g~~  181 (361)
                                                 ..|+|++|+.++.+.++++|++++..+++.+ ....++++++.. .++++|++
T Consensus        87 ---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~  139 (320)
T cd05286          87 ---------------------------PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDT  139 (320)
T ss_pred             ---------------------------CCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCE
Confidence                                       1589999999999999999999999888744 567788888764 88999999


Q ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccC
Q 018075          182 VMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG  260 (361)
Q Consensus       182 vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  260 (361)
                      |||+| +|++|++++++++.+|+ .+++++.++++.+.++++|++.++...  ..++...+....  .+.++|++|+|++
T Consensus       140 vlI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~--~~~~~d~vl~~~~  214 (320)
T cd05286         140 VLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYR--DEDFVERVREIT--GGRGVDVVYDGVG  214 (320)
T ss_pred             EEEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeCC--chhHHHHHHHHc--CCCCeeEEEECCC
Confidence            99999 69999999999999999 578888888999999999998776532  234444444332  3568999999999


Q ss_pred             ChHHHHHHHHhhcCCCEEEEEccCCCC-cceechHhhhcCcEEEEeecC---------CCcHHHHHHHHHcCCCCCCCce
Q 018075          261 FDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY---------RSTWPLCIEFLRSGKIDVKPLI  330 (361)
Q Consensus       261 ~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~---------~~~~~~~~~~l~~g~~~~~~~~  330 (361)
                      +. ..+..+++++++|+++.+|..... ..+....+..+++++.+....         .+.+.++++++.++.+.+  ..
T Consensus       215 ~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~  291 (320)
T cd05286         215 KD-TFEGSLDSLRPRGTLVSFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKV--EI  291 (320)
T ss_pred             cH-hHHHHHHhhccCcEEEEEecCCCCCCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcC--cc
Confidence            75 889999999999999999865432 122333333566676543221         234567889999998843  35


Q ss_pred             EEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075          331 THRFGFTQKEIEDAFEISAQGGNAIKVMFN  360 (361)
Q Consensus       331 ~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~  360 (361)
                      .+.|++  ++++++++.+.++...+|++++
T Consensus       292 ~~~~~~--~~~~~a~~~~~~~~~~~~vv~~  319 (320)
T cd05286         292 GKRYPL--ADAAQAHRDLESRKTTGKLLLI  319 (320)
T ss_pred             cceEcH--HHHHHHHHHHHcCCCCceEEEe
Confidence            567888  9999999999999888999875

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.2e-31  Score=237.36  Aligned_cols=266  Identities=37%  Similarity=0.652  Sum_probs=216.9

Q ss_pred             cEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCCcCCCCCccccCCCCCC
Q 018075           40 DVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNL  119 (361)
Q Consensus        40 eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~  119 (361)
                      ||+|+|.++++|+.|++...|...  .....|.++|+|++|+|+++|++++.|++||+|++.+...|+.|.+|..    .
T Consensus         1 ~v~i~v~~~~i~~~d~~~~~g~~~--~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~   74 (271)
T cd05188           1 EVLVRVEAAGLCGTDLHIRRGGYP--PPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----L   74 (271)
T ss_pred             CeEEEEEEEEecchhHHHHcCCCC--cCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----h
Confidence            689999999999999998876532  1235678999999999999999999999999999998899999999986    6


Q ss_pred             CCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHH
Q 018075          120 CPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRR-ANVGPETNVMIMGSGPIGLVTLLA  197 (361)
Q Consensus       120 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l~~-~~~~~g~~vlI~G~g~~G~~ai~l  197 (361)
                      |+...+.+ ....|+|++|+.++.+.++++|+++++++++.+ .++.+||++++. ..++++++|||+|+|++|++++++
T Consensus        75 ~~~~~~~~-~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~G~~~~~~  153 (271)
T cd05188          75 CPGGGILG-EGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQL  153 (271)
T ss_pred             CCCCCEec-cccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHH
Confidence            77665544 345899999999999999999999999998866 689999999876 556999999999976699999999


Q ss_pred             HHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCE
Q 018075          198 ARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGK  277 (361)
Q Consensus       198 a~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~  277 (361)
                      ++..|. .+++++.++++.+.++++|++.+++...  .+....+.   ...+.++|++|++++.....+.++++|+++|+
T Consensus       154 a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~---~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~  227 (271)
T cd05188         154 AKAAGA-RVIVTDRSDEKLELAKELGADHVIDYKE--EDLEEELR---LTGGGGADVVIDAVGGPETLAQALRLLRPGGR  227 (271)
T ss_pred             HHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCCc--CCHHHHHH---HhcCCCCCEEEECCCCHHHHHHHHHhcccCCE
Confidence            999998 6888889999999999999887765432  33433333   22457899999999984589999999999999


Q ss_pred             EEEEccCCCCccee-chHhhhcCcEEEEeecC-CCcHHHHHHH
Q 018075          278 VCLIGLAKTEMTVA-LTPAAAREVDVIGIFRY-RSTWPLCIEF  318 (361)
Q Consensus       278 ~v~~g~~~~~~~~~-~~~~~~~~~~i~~~~~~-~~~~~~~~~~  318 (361)
                      ++.++......... ....+.++.++.++..+ ..+++.++++
T Consensus       228 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (271)
T cd05188         228 IVVVGGTSGGPPLDDLRRLLFKELTIIGSTGGTREDFEEALDL  270 (271)
T ss_pred             EEEEccCCCCCCcccHHHHHhcceEEEEeecCCHHHHHHHHhh
Confidence            99998665432222 34567788999888766 4466666654

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd08251 polyketide_synthase polyketide synthase

Probab=100.00  E-value=6.3e-31  Score=238.27  Aligned_cols=288  Identities=23%  Similarity=0.391  Sum_probs=226.5

Q ss_pred             CCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCCcCCCCCccc
Q 018075           33 LPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLC  112 (361)
Q Consensus        33 ~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~  112 (361)
                      .|.+.+++|+|++.++++|+.|+....+...  ....+|.++|+|++|+|+++|++++++++||+|++...         
T Consensus         2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~--~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~---------   70 (303)
T cd08251           2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYP--TMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTG---------   70 (303)
T ss_pred             CCCCCCCEEEEEEEEeecChHHHHHHCCCCC--CCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecC---------
Confidence            5778999999999999999999988766432  12356889999999999999999999999999986311         


Q ss_pred             cCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHHHhcCCCCCCEEEEEC-CCHH
Q 018075          113 KAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRRANVGPETNVMIMG-SGPI  190 (361)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l~~~~~~~g~~vlI~G-~g~~  190 (361)
                                       ...|+|++|+.++++.++++|+++++++++.+ ..+.+||++++..++++|++++|+| +|++
T Consensus        71 -----------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~g~~vli~~~~~~~  133 (303)
T cd08251          71 -----------------ESMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFARAGLAKGEHILIQTATGGT  133 (303)
T ss_pred             -----------------CCCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHHhcCCCCCCEEEEecCCcHH
Confidence                             13689999999999999999999999888865 4788899998778899999999996 6999


Q ss_pred             HHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHH
Q 018075          191 GLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALN  270 (361)
Q Consensus       191 G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~  270 (361)
                      |++++|+++.+|+ .+++++.++++.+.++++|++.+++...  .++...+..+.  .+.++|+++|++++. .....++
T Consensus       134 g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~i~~~~--~~~~~d~v~~~~~~~-~~~~~~~  207 (303)
T cd08251         134 GLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYVE--EDFEEEIMRLT--GGRGVDVVINTLSGE-AIQKGLN  207 (303)
T ss_pred             HHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCC--ccHHHHHHHHc--CCCCceEEEECCcHH-HHHHHHH
Confidence            9999999999999 5888888888999999999988776432  35555554432  356899999999854 8899999


Q ss_pred             hhcCCCEEEEEccCCCC--cceechHhhhcCcEEEEe-----ecC-----CCcHHHHHHHHHcCCCCCCCceEEEecCCh
Q 018075          271 ATRPGGKVCLIGLAKTE--MTVALTPAAAREVDVIGI-----FRY-----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQ  338 (361)
Q Consensus       271 ~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~-----~~~-----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~  338 (361)
                      +++++|+++.++..+..  ..+.... ..++..+...     ...     .+.+.++++++++|.++  +...+.|++  
T Consensus       208 ~l~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~--  282 (303)
T cd08251         208 CLAPGGRYVEIAMTALKSAPSVDLSV-LSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELR--PTVSRIFPF--  282 (303)
T ss_pred             HhccCcEEEEEeccCCCccCccChhH-hhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCcc--CCCceEEcH--
Confidence            99999999998754321  1122211 1222222221     111     24577788999999884  445677888  


Q ss_pred             hhHHHHHHHHhcCCCceEEEE
Q 018075          339 KEIEDAFEISAQGGNAIKVMF  359 (361)
Q Consensus       339 ~~~~~a~~~l~~~~~~gkvvi  359 (361)
                      ++++++++.+.+++..+|+++
T Consensus       283 ~~~~~~~~~~~~~~~~~~iv~  303 (303)
T cd08251         283 DDIGEAYRYLSDRENIGKVVV  303 (303)
T ss_pred             HHHHHHHHHHHhCCCcceEeC
Confidence            999999999999888888874

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=100.00  E-value=2.1e-30  Score=237.11  Aligned_cols=298  Identities=25%  Similarity=0.343  Sum_probs=236.1

Q ss_pred             CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCC
Q 018075           24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPG  103 (361)
Q Consensus        24 ~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~  103 (361)
                      ..+++++.+.|.+++++++|+|.++++|+.|+....+...  .+..+|.++|+|++|+|+.+|+++..+++||+|+..  
T Consensus        13 ~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~--~~~~~~~~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~--   88 (325)
T TIGR02824        13 EVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYP--PPPGASDILGLEVAGEVVAVGEGVSRWKVGDRVCAL--   88 (325)
T ss_pred             ccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCC--CCCCCCCCccceeEEEEEEeCCCCCCCCCCCEEEEc--
Confidence            4577888777778999999999999999999887755332  112357899999999999999999999999999862  


Q ss_pred             cCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHHH-hcCCCCCCE
Q 018075          104 ISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACR-RANVGPETN  181 (361)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l~-~~~~~~g~~  181 (361)
                                                ...|+|++|+.++.+.++++|+++++..++.+ .++.++++++. ...+++|++
T Consensus        89 --------------------------~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~  142 (325)
T TIGR02824        89 --------------------------VAGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGET  142 (325)
T ss_pred             --------------------------cCCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCE
Confidence                                      12489999999999999999999998777644 57888898864 488999999


Q ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccC
Q 018075          182 VMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG  260 (361)
Q Consensus       182 vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  260 (361)
                      ++|+| +|++|++++++++..|+ .++.+..++++.+.++++|++.+++..  ..++...+....  .+.++|+++++++
T Consensus       143 vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~--~~~~~d~~i~~~~  217 (325)
T TIGR02824       143 VLIHGGASGIGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAINYR--EEDFVEVVKAET--GGKGVDVILDIVG  217 (325)
T ss_pred             EEEEcCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecC--chhHHHHHHHHc--CCCCeEEEEECCc
Confidence            99998 59999999999999999 577777888888888889987765532  234444444332  3457999999999


Q ss_pred             ChHHHHHHHHhhcCCCEEEEEccCCC-CcceechHhhhcCcEEEEeecCC-----------CcHHHHHHHHHcCCCCCCC
Q 018075          261 FDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRYR-----------STWPLCIEFLRSGKIDVKP  328 (361)
Q Consensus       261 ~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~-----------~~~~~~~~~l~~g~~~~~~  328 (361)
                      +. .....+++++++|+++.+|.... ...+....+..++.++.+.....           ..+.+++++++++.+  .+
T Consensus       218 ~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~  294 (325)
T TIGR02824       218 GS-YLNRNIKALALDGRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRV--RP  294 (325)
T ss_pred             hH-HHHHHHHhhccCcEEEEEecCCCCcCCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcc--cC
Confidence            75 88899999999999999986442 12334444557888888775321           234567889999988  44


Q ss_pred             ceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          329 LITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       329 ~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      ..++.+++  ++++++++.+.++...+|+++++
T Consensus       295 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~  325 (325)
T TIGR02824       295 VIDKVFPL--EDAAQAHALMESGDHIGKIVLTV  325 (325)
T ss_pred             ccccEEeH--HHHHHHHHHHHhCCCcceEEEeC
Confidence            46677888  99999999999888889999875

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=5.8e-30  Score=234.46  Aligned_cols=311  Identities=27%  Similarity=0.398  Sum_probs=239.7

Q ss_pred             eEEEEee---CCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCC
Q 018075           16 MAAWLLG---IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL   92 (361)
Q Consensus        16 ~~~~~~~---~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   92 (361)
                      +++++.+   +..+++++.+.|++.+++++|+|.++++|+.|+....+.....  ...|.++|||++|+|+.+|++++++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~--~~~~~~~g~e~~G~v~~~G~~~~~~   79 (328)
T cd08268           2 RAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEP--PPLPARLGYEAAGVVEAVGAGVTGF   79 (328)
T ss_pred             eEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCC--CCCCCCCCcceEEEEEeeCCCCCcC
Confidence            4444443   2468888888888999999999999999999998776643221  3457899999999999999999999


Q ss_pred             CCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHH
Q 018075           93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHAC  171 (361)
Q Consensus        93 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l  171 (361)
                      ++||+|++.+..                       .....|+|++|+.++.+.++++|+++++++++.+ ..+.+||.++
T Consensus        80 ~~Gd~V~~~~~~-----------------------~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~  136 (328)
T cd08268          80 AVGDRVSVIPAA-----------------------DLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGAL  136 (328)
T ss_pred             CCCCEEEecccc-----------------------ccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHH
Confidence            999999874210                       0123689999999999999999999998887744 5888899988


Q ss_pred             Hh-cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcC
Q 018075          172 RR-ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       172 ~~-~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      +. ..+.++++++|+| +|++|++++++++..|+ .++.++.+.++.+.++++|.+.+++...  .++...+....  .+
T Consensus       137 ~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~--~~  211 (328)
T cd08268         137 VELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIVTDE--EDLVAEVLRIT--GG  211 (328)
T ss_pred             HHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEecCC--ccHHHHHHHHh--CC
Confidence            64 7889999999998 59999999999999999 5777778888888888899877665432  34444443332  24


Q ss_pred             CCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC-cceechHhhhcCcEEEEeecC---------CCcHHHHHHHH
Q 018075          250 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY---------RSTWPLCIEFL  319 (361)
Q Consensus       250 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~---------~~~~~~~~~~l  319 (361)
                      .++|+++++.++. ....++++++++|+++.+|..... ........+.++..+.+....         ...++.+.+++
T Consensus       212 ~~~d~vi~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (328)
T cd08268         212 KGVDVVFDPVGGP-QFAKLADALAPGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGL  290 (328)
T ss_pred             CCceEEEECCchH-hHHHHHHhhccCCEEEEEEeCCCCCCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHH
Confidence            5799999999985 889999999999999999865431 223333346677777665432         12345566777


Q ss_pred             HcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          320 RSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       320 ~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      .++.+.  +.....|++  ++++++++.+..+...+|++++.
T Consensus       291 ~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~vv~~~  328 (328)
T cd08268         291 ASGALK--PVVDRVFPF--DDIVEAHRYLESGQQIGKIVVTP  328 (328)
T ss_pred             HCCCCc--CCcccEEcH--HHHHHHHHHHHcCCCCceEEEeC
Confidence            788873  345567788  99999999999988889999863

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=100.00  E-value=1.7e-30  Score=236.04  Aligned_cols=300  Identities=27%  Similarity=0.374  Sum_probs=230.5

Q ss_pred             eEEEEeeCC---ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCC
Q 018075           16 MAAWLLGIK---TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL   92 (361)
Q Consensus        16 ~~~~~~~~~---~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   92 (361)
                      ++.++..++   .+.+++.+.|++++++|+|+|.++++|+.|+....|..........|.++|+|++|+|+.+|+++..+
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~   81 (309)
T cd05289           2 KAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTGF   81 (309)
T ss_pred             ceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCCC
Confidence            344554433   36788888888999999999999999999998876643211123458899999999999999999999


Q ss_pred             CCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHH
Q 018075           93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHAC  171 (361)
Q Consensus        93 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l  171 (361)
                      ++||+|++.+.                         ....|+|++|+.++.+.++++|+++++..++.+ ..+.++++++
T Consensus        82 ~~G~~V~~~~~-------------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~  136 (309)
T cd05289          82 KVGDEVFGMTP-------------------------FTRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQAL  136 (309)
T ss_pred             CCCCEEEEccC-------------------------CCCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHH
Confidence            99999986421                         012689999999999999999999998887755 4677888888


Q ss_pred             Hh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcC
Q 018075          172 RR-ANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       172 ~~-~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      +. ..+.+|++++|+|+ |.+|++++++++..|++ ++.++.++ +.+.++++|++.++....  .++.+      ...+
T Consensus       137 ~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~~-v~~~~~~~-~~~~~~~~g~~~~~~~~~--~~~~~------~~~~  206 (309)
T cd05289         137 FELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGAR-VIATASAA-NADFLRSLGADEVIDYTK--GDFER------AAAP  206 (309)
T ss_pred             HhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEEecch-hHHHHHHcCCCEEEeCCC--Cchhh------ccCC
Confidence            76 56899999999995 99999999999999995 66666666 788888899877665332  22222      1235


Q ss_pred             CCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC--CCcHHHHHHHHHcCCCCCC
Q 018075          250 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY--RSTWPLCIEFLRSGKIDVK  327 (361)
Q Consensus       250 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~l~~g~~~~~  327 (361)
                      .++|++++++++. .....+++++++|+++.+|.......    ....++..+......  .+.+.+++++++++.+  .
T Consensus       207 ~~~d~v~~~~~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  279 (309)
T cd05289         207 GGVDAVLDTVGGE-TLARSLALVKPGGRLVSIAGPPPAEQ----AAKRRGVRAGFVFVEPDGEQLAELAELVEAGKL--R  279 (309)
T ss_pred             CCceEEEECCchH-HHHHHHHHHhcCcEEEEEcCCCcchh----hhhhccceEEEEEecccHHHHHHHHHHHHCCCE--E
Confidence            6799999999977 88999999999999999986543211    222334444433222  4578889999999987  4


Q ss_pred             CceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 018075          328 PLITHRFGFTQKEIEDAFEISAQGGNAIKVMF  359 (361)
Q Consensus       328 ~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi  359 (361)
                      +..++.|++  ++++++++.+..+...+|+++
T Consensus       280 ~~~~~~~~~--~~~~~a~~~~~~~~~~~kvv~  309 (309)
T cd05289         280 PVVDRVFPL--EDAAEAHERLESGHARGKVVL  309 (309)
T ss_pred             EeeccEEcH--HHHHHHHHHHHhCCCCCcEeC
Confidence            456678888  999999999998877788774

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=2.4e-30  Score=236.41  Aligned_cols=295  Identities=28%  Similarity=0.349  Sum_probs=222.2

Q ss_pred             EEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCCcCC
Q 018075           27 KIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISC  106 (361)
Q Consensus        27 ~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~  106 (361)
                      ++++.+.|++.++||+|++.++++|++|+....|..........|.++|+|++|+|+++|+++.++++||+|+....   
T Consensus        15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~---   91 (319)
T cd08267          15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLP---   91 (319)
T ss_pred             ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEecc---
Confidence            88889999999999999999999999999887654311111234678999999999999999999999999986321   


Q ss_pred             CCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHHHh-cCCCCCCEEEE
Q 018075          107 GHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRR-ANVGPETNVMI  184 (361)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l~~-~~~~~g~~vlI  184 (361)
                                            ....|+|++|+.++.+.++++|+++++++++.+ ..+.+||++++. ..+++|++|+|
T Consensus        92 ----------------------~~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli  149 (319)
T cd08267          92 ----------------------PKGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLI  149 (319)
T ss_pred             ----------------------CCCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEE
Confidence                                  013589999999999999999999999887755 578889999876 56899999999


Q ss_pred             ECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccCCh-
Q 018075          185 MGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD-  262 (361)
Q Consensus       185 ~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~-  262 (361)
                      +|+ |++|++++++|+.+|+ .+++++.+ ++.+.++++|++.+++...  .++.   ..  ...+.++|++++|+++. 
T Consensus       150 ~g~~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~--~~~~---~~--~~~~~~~d~vi~~~~~~~  220 (319)
T cd08267         150 NGASGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYTT--EDFV---AL--TAGGEKYDVIFDAVGNSP  220 (319)
T ss_pred             EcCCcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCCC--CCcc---hh--ccCCCCCcEEEECCCchH
Confidence            995 9999999999999999 56776654 8888889999877665432  2222   11  12356799999999842 


Q ss_pred             HHHHHHHHhhcCCCEEEEEccCCCCcceec-----h-HhhhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceEEEecC
Q 018075          263 KTMSTALNATRPGGKVCLIGLAKTEMTVAL-----T-PAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGF  336 (361)
Q Consensus       263 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-----~-~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~l  336 (361)
                      ......+..++++|+++.+|..........     . ....+.+.........+.+.+++++++++.+  .+..++.|++
T Consensus       221 ~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~  298 (319)
T cd08267         221 FSLYRASLALKPGGRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKPNAEDLEQLAELVEEGKL--KPVIDSVYPL  298 (319)
T ss_pred             HHHHHhhhccCCCCEEEEeccccccccccccccchhhccccceEEEEEecCCHHHHHHHHHHHHCCCe--eeeeeeEEcH
Confidence            233444445999999999986543221111     1 1111222222111115678889999999988  4456788888


Q ss_pred             ChhhHHHHHHHHhcCCCceEEEE
Q 018075          337 TQKEIEDAFEISAQGGNAIKVMF  359 (361)
Q Consensus       337 ~~~~~~~a~~~l~~~~~~gkvvi  359 (361)
                        ++++++++.+.++...+|+++
T Consensus       299 --~~i~~a~~~~~~~~~~~~vvv  319 (319)
T cd08267         299 --EDAPEAYRRLKSGRARGKVVI  319 (319)
T ss_pred             --HHHHHHHHHHhcCCCCCcEeC
Confidence              999999999998888888874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=8.5e-30  Score=232.77  Aligned_cols=304  Identities=30%  Similarity=0.490  Sum_probs=239.0

Q ss_pred             eEEEEee---CCceEEEEecCCCCC-CCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCC
Q 018075           16 MAAWLLG---IKTLKIQPYHLPTLG-PQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS   91 (361)
Q Consensus        16 ~~~~~~~---~~~l~~~~~~~p~~~-~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   91 (361)
                      +++++..   +..+++.+.+ |.+. +++++|++.++++|++|+....|....  ....|+++|+|++|+|+.+|+++..
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~~~   78 (323)
T cd08241           2 KAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQV--KPPLPFVPGSEVAGVVEAVGEGVTG   78 (323)
T ss_pred             eEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCC--CCCCCCcccceeEEEEEEeCCCCCC
Confidence            4556552   3567888877 7665 599999999999999999877654311  1234778999999999999999999


Q ss_pred             CCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHH
Q 018075           92 LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHA  170 (361)
Q Consensus        92 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~  170 (361)
                      +++||+|++.+                            ..|+|++|+.++.+.++++|+++++.+++.+ .++.+|+.+
T Consensus        79 ~~~G~~V~~~~----------------------------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~  130 (323)
T cd08241          79 FKVGDRVVALT----------------------------GQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHA  130 (323)
T ss_pred             CCCCCEEEEec----------------------------CCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHH
Confidence            99999999631                            2589999999999999999999998887744 578889988


Q ss_pred             HH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhc
Q 018075          171 CR-RANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       171 l~-~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      +. ...++++++++|+|+ |++|++++++++..|+ .++.++.+.++.+.++++|++..+...  ..++.+.+....  .
T Consensus       131 ~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~i~~~~--~  205 (323)
T cd08241         131 LVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVIDYR--DPDLRERVKALT--G  205 (323)
T ss_pred             HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCceeeecC--CccHHHHHHHHc--C
Confidence            86 478999999999995 9999999999999999 578888888899999999987766532  234545544432  3


Q ss_pred             CCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcc-eechHhhhcCcEEEEeecC----------CCcHHHHHH
Q 018075          249 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMT-VALTPAAAREVDVIGIFRY----------RSTWPLCIE  317 (361)
Q Consensus       249 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~i~~~~~~----------~~~~~~~~~  317 (361)
                      +.++|++++++|+. .....+++++++|+++.++....... +.......++.++.+....          .+.+.++++
T Consensus       206 ~~~~d~v~~~~g~~-~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (323)
T cd08241         206 GRGVDVVYDPVGGD-VFEASLRSLAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFD  284 (323)
T ss_pred             CCCcEEEEECccHH-HHHHHHHhhccCCEEEEEccCCCCcCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHH
Confidence            46799999999974 88999999999999999986543222 2233445677888776532          245678899


Q ss_pred             HHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075          318 FLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  360 (361)
Q Consensus       318 ~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~  360 (361)
                      ++.++.+  .+..++.|++  ++++++++.+.++...+|++++
T Consensus       285 ~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~~vvv~  323 (323)
T cd08241         285 LLAEGKI--RPHVSAVFPL--EQAAEALRALADRKATGKVVLT  323 (323)
T ss_pred             HHHCCCc--ccccceEEcH--HHHHHHHHHHHhCCCCCcEEeC
Confidence            9999988  4446677888  9999999999988888898864

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.5e-29  Score=232.78  Aligned_cols=296  Identities=26%  Similarity=0.380  Sum_probs=231.3

Q ss_pred             CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCC
Q 018075           24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPG  103 (361)
Q Consensus        24 ~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~  103 (361)
                      ..+.+++.+.|.+.+++|+|++.++++|++|+....|....  .+..|.++|+|++|+|+.+|+++.++++||+|++.  
T Consensus        12 ~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~--   87 (337)
T cd08275          12 DKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDS--APKPPFVPGFECAGTVEAVGEGVKDFKVGDRVMGL--   87 (337)
T ss_pred             cceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC--CCCCCCCCcceeEEEEEEECCCCcCCCCCCEEEEe--
Confidence            46888888888889999999999999999999887664321  13457789999999999999999999999999963  


Q ss_pred             cCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHHHh-cCCCCCCE
Q 018075          104 ISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRR-ANVGPETN  181 (361)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l~~-~~~~~g~~  181 (361)
                                                ...|+|++|+.++.+.++++|+++++.+++.+ .++.+||+++.. .++++|++
T Consensus        88 --------------------------~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~  141 (337)
T cd08275          88 --------------------------TRFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQS  141 (337)
T ss_pred             --------------------------cCCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCE
Confidence                                      12589999999999999999999998888755 478889999754 88999999


Q ss_pred             EEEECC-CHHHHHHHHHHHHcCCCEEEEEe-CChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEcc
Q 018075          182 VMIMGS-GPIGLVTLLAARAFGAPRIIITD-VDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV  259 (361)
Q Consensus       182 vlI~G~-g~~G~~ai~la~~~g~~~vv~v~-~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  259 (361)
                      |+|+|+ |++|++++++|+.. . .+.+++ .++++.+.++++|++.+++..  ..++...+....   +.++|+++|++
T Consensus       142 vli~g~~g~~g~~~~~~a~~~-~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~~---~~~~d~v~~~~  214 (337)
T cd08275         142 VLVHSAAGGVGLAAGQLCKTV-P-NVTVVGTASASKHEALKENGVTHVIDYR--TQDYVEEVKKIS---PEGVDIVLDAL  214 (337)
T ss_pred             EEEEcCcchHHHHHHHHHHHc-c-CcEEEEeCCHHHHHHHHHcCCcEEeeCC--CCcHHHHHHHHh---CCCceEEEECC
Confidence            999995 99999999999999 2 223332 345577888889987766533  245555554442   46899999999


Q ss_pred             CChHHHHHHHHhhcCCCEEEEEccCCCCc--c---------------eechHhhhcCcEEEEeecC---------CCcHH
Q 018075          260 GFDKTMSTALNATRPGGKVCLIGLAKTEM--T---------------VALTPAAAREVDVIGIFRY---------RSTWP  313 (361)
Q Consensus       260 g~~~~~~~~~~~l~~~G~~v~~g~~~~~~--~---------------~~~~~~~~~~~~i~~~~~~---------~~~~~  313 (361)
                      |+. .....+++++++|+++.+|......  .               +.......++.++.++...         ...+.
T Consensus       215 g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (337)
T cd08275         215 GGE-DTRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMD  293 (337)
T ss_pred             cHH-HHHHHHHhhccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHH
Confidence            976 7899999999999999998543211  1               1112345677777776432         12366


Q ss_pred             HHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          314 LCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       314 ~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      ++++++.++.+  .+...+.|++  ++++++++.+.++...+|+++++
T Consensus       294 ~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~kvv~~~  337 (337)
T cd08275         294 KLLKLYEEGKI--KPKIDSVFPF--EEVGEAMRRLQSRKNIGKVVLTP  337 (337)
T ss_pred             HHHHHHHCCCC--CCceeeEEcH--HHHHHHHHHHHcCCCcceEEEeC
Confidence            78889999988  4446677888  99999999999988889999874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.97  E-value=5.1e-31  Score=254.90  Aligned_cols=314  Identities=19%  Similarity=0.230  Sum_probs=247.8

Q ss_pred             ccccccccCCcccceEEEEe----eC-CceEEEEecCC---CCCCCcEEEEEeeeecCcchhhhhcccccccccC----C
Q 018075            2 AEAIRDDEGDKNQNMAAWLL----GI-KTLKIQPYHLP---TLGPQDVKVRIKALGICGSDVHHFKTMRCANFIV----K   69 (361)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~----~~-~~l~~~~~~~p---~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~----~   69 (361)
                      |+...+..+......+|++.    +. .+++|.|.|..   +..++.-+..|.|++||+.|+....|+...+..+    .
T Consensus      1400 RHl~le~~~~~~~~ehAfvntLtrGDlsSlrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~ 1479 (2376)
T KOG1202|consen 1400 RHLKLEEDKPELPVEHAFVNTLTRGDLSSLRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLAS 1479 (2376)
T ss_pred             eeeEecccCCCcchHHHHHHHhhhccccceeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccch
Confidence            44444444433344444443    33 68999998875   3477888999999999999999999987654332    5


Q ss_pred             CCcccCcceeEEEEEeCCCCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEEC
Q 018075           70 KPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKL  149 (361)
Q Consensus        70 ~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v  149 (361)
                      ..+++|.||+|+          .+-|.||++.                            ..-.++++.+.++.++++.+
T Consensus      1480 qdclLGmEFsGR----------d~~GrRvM~m----------------------------vpAksLATt~l~~rd~lWev 1521 (2376)
T KOG1202|consen 1480 QDCLLGMEFSGR----------DASGRRVMGM----------------------------VPAKSLATTVLASRDFLWEV 1521 (2376)
T ss_pred             hhheeceeeccc----------cCCCcEEEEe----------------------------eehhhhhhhhhcchhhhhhC
Confidence            678999999999          7889999973                            33577899999999999999


Q ss_pred             CCCCCcccccccc-hhHHHHHHH-HhcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc----
Q 018075          150 PDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIM-GSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----  222 (361)
Q Consensus       150 P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~-G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----  222 (361)
                      |.++.+++|+..+ .++|||++| .++..++|+++||| |+|++|++||.+|.+.|. .|+.+..++||++++.++    
T Consensus      1522 P~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqL 1600 (2376)
T KOG1202|consen 1522 PSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQL 1600 (2376)
T ss_pred             CcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhh
Confidence            9999999999776 689999998 56999999999999 589999999999999999 688888999999988763    


Q ss_pred             CCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceech-HhhhcCcE
Q 018075          223 GADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT-PAAAREVD  301 (361)
Q Consensus       223 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~  301 (361)
                      ...++-  ++.+.+|..-+.  +.+.++|+|+|+++.... -++.+++||+.+|||..+|--+...+.++. ..+.++.+
T Consensus      1601 qe~~~~--NSRdtsFEq~vl--~~T~GrGVdlVLNSLaeE-kLQASiRCLa~~GRFLEIGKfDLSqNspLGMavfLkNvs 1675 (2376)
T KOG1202|consen 1601 QETNFA--NSRDTSFEQHVL--WHTKGRGVDLVLNSLAEE-KLQASIRCLALHGRFLEIGKFDLSQNSPLGMAVFLKNVS 1675 (2376)
T ss_pred             hhhccc--ccccccHHHHHH--HHhcCCCeeeehhhhhHH-HHHHHHHHHHhcCeeeeecceecccCCcchhhhhhcccc
Confidence            233332  245567776664  445799999999999954 999999999999999999965544343443 46788999


Q ss_pred             EEEeecC------CCcHHHHHHHHHcCCCC--CCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          302 VIGIFRY------RSTWPLCIEFLRSGKID--VKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       302 i~~~~~~------~~~~~~~~~~l~~g~~~--~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      ++|....      .+.+.++..++++|.-.  .+|+.+++|+-  .++++|++.|.+|++.|||||++
T Consensus      1676 fHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~--~qvE~AFRfMasGKHIGKVvikv 1741 (2376)
T KOG1202|consen 1676 FHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHG--QQVEDAFRFMASGKHIGKVVIKV 1741 (2376)
T ss_pred             eeeeehhhhhcCcHHHHHHHHHHHHhhhccCceeccccccccH--HHHHHHHHHHhccCccceEEEEE
Confidence            9998653      44677777777766432  37777888877  99999999999999999999974

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=99.97  E-value=1.1e-28  Score=221.87  Aligned_cols=276  Identities=26%  Similarity=0.344  Sum_probs=217.3

Q ss_pred             CcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCCcCCCCCccccCCCCC
Q 018075           39 QDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYN  118 (361)
Q Consensus        39 ~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~  118 (361)
                      +||+||+.++++|++|++...|..     ...|.++|+|++|+|+++|+++.++++||+|++.                 
T Consensus         1 ~~v~i~v~~~~~~~~d~~~~~g~~-----~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~-----------------   58 (293)
T cd05195           1 DEVEVEVKAAGLNFRDVLVALGLL-----PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGL-----------------   58 (293)
T ss_pred             CceEEEEEEEecCHHHHHHHhCCC-----CCCCCccceeeeEEEEeecCCccCCCCCCEEEEE-----------------
Confidence            589999999999999999876542     2457899999999999999999999999999863                 


Q ss_pred             CCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHHHh-cCCCCCCEEEEEC-CCHHHHHHH
Q 018075          119 LCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRR-ANVGPETNVMIMG-SGPIGLVTL  195 (361)
Q Consensus       119 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l~~-~~~~~g~~vlI~G-~g~~G~~ai  195 (361)
                                  ..|+|++|+.++.+.++++|+++++.+++.+ .+..+++.++.. ..+++|++++|+| +|++|++++
T Consensus        59 ------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~  126 (293)
T cd05195          59 ------------APGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAI  126 (293)
T ss_pred             ------------ecCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHH
Confidence                        2589999999999999999999999888865 578888888754 7899999999997 699999999


Q ss_pred             HHHHHcCCCEEEEEeCChhHHHHHHHcC--CCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhc
Q 018075          196 LAARAFGAPRIIITDVDVQRLSIARNLG--ADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATR  273 (361)
Q Consensus       196 ~la~~~g~~~vv~v~~~~~~~~~~~~lg--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~  273 (361)
                      ++++..|+ .++.++.++++.+.+++++  ++..++..  ..++.+.+.+..  .+.++|++|+++++. .++..+++++
T Consensus       127 ~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~d~vi~~~~~~-~~~~~~~~l~  200 (293)
T cd05195         127 QLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSSR--DLSFADGILRAT--GGRGVDVVLNSLSGE-LLRASWRCLA  200 (293)
T ss_pred             HHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeecC--chhHHHHHHHHh--CCCCceEEEeCCCch-HHHHHHHhcc
Confidence            99999999 5788888888888888888  56665532  234444444432  356899999999987 8999999999


Q ss_pred             CCCEEEEEccCCCC--cceechHhhhcCcEEEEeecC----------CCcHHHHHHHHHcCCCCCCCceEEEecCChhhH
Q 018075          274 PGGKVCLIGLAKTE--MTVALTPAAAREVDVIGIFRY----------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEI  341 (361)
Q Consensus       274 ~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~~~~~~----------~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~  341 (361)
                      ++|+++.+|.....  ..+.... ..++..+......          .+.+..++++++++++  .+..+..+.+  +++
T Consensus       201 ~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~  275 (293)
T cd05195         201 PFGRFVEIGKRDILSNSKLGMRP-FLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVL--KPLPPTVVPS--ASE  275 (293)
T ss_pred             cCceEEEeeccccccCCccchhh-hccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCc--ccCCCeeech--hhH
Confidence            99999999865432  1122211 2233444433211          2356788899999988  4555666788  999


Q ss_pred             HHHHHHHhcCCCceEEEE
Q 018075          342 EDAFEISAQGGNAIKVMF  359 (361)
Q Consensus       342 ~~a~~~l~~~~~~gkvvi  359 (361)
                      +++++.+.++...+|+++
T Consensus       276 ~~a~~~~~~~~~~~~ivv  293 (293)
T cd05195         276 IDAFRLMQSGKHIGKVVL  293 (293)
T ss_pred             HHHHHHHhcCCCCceecC
Confidence            999999998888888764

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.97  E-value=2.3e-28  Score=219.09  Aligned_cols=246  Identities=28%  Similarity=0.416  Sum_probs=196.3

Q ss_pred             cCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCce
Q 018075           67 IVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLC  146 (361)
Q Consensus        67 ~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  146 (361)
                      +.++|.++|+|++|+|+++|++++++++||+|++                               .++|++|++++.+.+
T Consensus        17 ~~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~-------------------------------~~~~~~~~~v~~~~~   65 (277)
T cd08255          17 KLPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFC-------------------------------FGPHAERVVVPANLL   65 (277)
T ss_pred             cCcCCcccCcceeEEEEEeCCCCCCCCCCCEEEe-------------------------------cCCcceEEEcCHHHe
Confidence            3468899999999999999999999999999986                               246899999999999


Q ss_pred             EECCCCCCcccccccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcC-CC
Q 018075          147 YKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG-AD  225 (361)
Q Consensus       147 ~~vP~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg-~~  225 (361)
                      +++|+++++++++.+.++.+||++++..++++|+++||+|+|++|++++++|+.+|+++++++++++++.++++++| ++
T Consensus        66 ~~ip~~l~~~~aa~~~~~~ta~~~~~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~~~g~~~  145 (277)
T cd08255          66 VPLPDGLPPERAALTALAATALNGVRDAEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPAD  145 (277)
T ss_pred             eECcCCCCHHHhHHHHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHHHcCCCc
Confidence            99999999988886677888999987788999999999999999999999999999965888989999999999999 44


Q ss_pred             EEeecCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEe
Q 018075          226 ETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGI  305 (361)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~  305 (361)
                      .+.....   .       .  ..+.++|++||+++.....+..+++++++|+++.+|............+..+..++.+.
T Consensus       146 ~~~~~~~---~-------~--~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  213 (277)
T cd08255         146 PVAADTA---D-------E--IGGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLKPLLLGEEFHFKRLPIRSS  213 (277)
T ss_pred             cccccch---h-------h--hcCCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCCccccHHHHHhccCeEEee
Confidence            4433211   0       1  13568999999988777889999999999999999865433111112234445555554


Q ss_pred             ecC-------------CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcC-CCceEEEE
Q 018075          306 FRY-------------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG-GNAIKVMF  359 (361)
Q Consensus       306 ~~~-------------~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~-~~~gkvvi  359 (361)
                      ...             .+.+++++++++++.+  .+.+.+.+++  ++++++++.+.++ +...|+++
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l--~~~~~~~~~~--~~~~~a~~~~~~~~~~~~k~~~  277 (277)
T cd08255         214 QVYGIGRYDRPRRWTEARNLEEALDLLAEGRL--EALITHRVPF--EDAPEAYRLLFEDPPECLKVVL  277 (277)
T ss_pred             cccccccccccccccccccHHHHHHHHHcCCc--cccccCccCH--HHHHHHHHHHHcCCccceeeeC
Confidence            422             2568899999999997  4445677788  9999999999877 55677663

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>smart00829 PKS_ER Enoylreductase

Probab=99.97  E-value=6.8e-28  Score=216.46  Aligned_cols=271  Identities=27%  Similarity=0.391  Sum_probs=212.0

Q ss_pred             EEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCC
Q 018075           43 VRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE  122 (361)
Q Consensus        43 V~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~  122 (361)
                      |||.++++|++|++...|..      ..|.++|+|++|+|+++|++++.+++||+|++.                     
T Consensus         2 i~v~~~~i~~~d~~~~~g~~------~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~---------------------   54 (288)
T smart00829        2 VEVRAAGLNFRDVLIALGLL------PGEAVLGGECAGVVTRVGPGVTGLAVGDRVMGL---------------------   54 (288)
T ss_pred             eeEEEEecCHHHHHHhcCCC------CCCCCCCceeEEEEEeeCCCCcCCCCCCEEEEE---------------------
Confidence            89999999999999876532      236789999999999999999999999999863                     


Q ss_pred             ccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccc-hhHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHH
Q 018075          123 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMG-SGPIGLVTLLAAR  199 (361)
Q Consensus       123 ~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~G-~g~~G~~ai~la~  199 (361)
                              ..|+|++|+.++.+.++++|+++++.+++.+. .+.+++.++ +...+++|++|+|+| +|++|++++++++
T Consensus        55 --------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~  126 (288)
T smart00829       55 --------APGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQ  126 (288)
T ss_pred             --------cCCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHH
Confidence                    25899999999999999999999998888664 778888887 448899999999998 6999999999999


Q ss_pred             HcCCCEEEEEeCChhHHHHHHHcCC--CEEeecCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCE
Q 018075          200 AFGAPRIIITDVDVQRLSIARNLGA--DETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGK  277 (361)
Q Consensus       200 ~~g~~~vv~v~~~~~~~~~~~~lg~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~  277 (361)
                      ..|+ .++.++.++++.+.++++|+  +..+++.  ..++.+.+....  .++++|+++|++++ ......+++++++|+
T Consensus       127 ~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~--~~~~~d~vi~~~~~-~~~~~~~~~l~~~g~  200 (288)
T smart00829      127 HLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSR--DLSFADEILRAT--GGRGVDVVLNSLAG-EFLDASLRCLAPGGR  200 (288)
T ss_pred             HcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCC--CccHHHHHHHHh--CCCCcEEEEeCCCH-HHHHHHHHhccCCcE
Confidence            9999 58888888999999999998  5665532  234444443332  34679999999996 488999999999999


Q ss_pred             EEEEccCCCC--cceechHhhhcCcEEEEeecC---------CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHH
Q 018075          278 VCLIGLAKTE--MTVALTPAAAREVDVIGIFRY---------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFE  346 (361)
Q Consensus       278 ~v~~g~~~~~--~~~~~~~~~~~~~~i~~~~~~---------~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~  346 (361)
                      ++.+|.....  ...+... +.++..+.+....         .+.+..++++++++++.+  ...+.|++  ++++++++
T Consensus       201 ~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~  275 (288)
T smart00829      201 FVEIGKRDIRDNSQLGMAP-FRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRP--LPVTVFPI--SDVEDAFR  275 (288)
T ss_pred             EEEEcCcCCccccccchhh-hcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccC--cCceEEcH--HHHHHHHH
Confidence            9999865321  1222222 2344444443211         234667888999998843  34567888  99999999


Q ss_pred             HHhcCCCceEEEE
Q 018075          347 ISAQGGNAIKVMF  359 (361)
Q Consensus       347 ~l~~~~~~gkvvi  359 (361)
                      .+..+...+|+++
T Consensus       276 ~~~~~~~~~~ivv  288 (288)
T smart00829      276 YMQQGKHIGKVVL  288 (288)
T ss_pred             HHhcCCCcceEeC
Confidence            9998877778764

Enoylreductase in Polyketide synthases.

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=99.95  E-value=5.4e-26  Score=193.21  Aligned_cols=293  Identities=16%  Similarity=0.197  Sum_probs=223.1

Q ss_pred             CceEEE--EecCC-CCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccC----cceeEEEEEeCCCCCCCCCCC
Q 018075           24 KTLKIQ--PYHLP-TLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIG----HECAGIIEEVGSEVKSLEVGD   96 (361)
Q Consensus        24 ~~l~~~--~~~~p-~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G----~e~~G~V~~vG~~v~~~~~Gd   96 (361)
                      +.+.++  +++.+ ++++++||||..|.+..|...-.+.-.....  .-.|+.+|    ..++|+|++.  +-+++++||
T Consensus        20 ~d~~~~~~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~--y~~~~~~G~pi~g~GV~kVi~S--~~~~~~~GD   95 (343)
T KOG1196|consen   20 SDFEFTTTTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSD--YAPPYEPGKPIDGFGVAKVIDS--GHPNYKKGD   95 (343)
T ss_pred             ccceeeeeeecccCCCCCccEEeEeeeecCCHHHHhhccCCCccc--ccCcccCCcEecCCceEEEEec--CCCCCCcCc
Confidence            344444  34443 4699999999999999998865543222111  12333343    3788999995  556799999


Q ss_pred             EEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCc--eEECCC--CCCc--ccccccchhHHHHHH
Q 018075           97 RVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKL--CYKLPD--NVSL--EEGAMCEPLSVGVHA  170 (361)
Q Consensus        97 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~vP~--~~~~--~~aa~~~~~~~a~~~  170 (361)
                      .|+..                               -+|.||.++++..  .+++|.  ++++  -..++-++..|||..
T Consensus        96 ~v~g~-------------------------------~gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~G  144 (343)
T KOG1196|consen   96 LVWGI-------------------------------VGWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAG  144 (343)
T ss_pred             eEEEe-------------------------------ccceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHH
Confidence            99862                               2799999998754  444443  3333  333444789999999


Q ss_pred             HHh-cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH-cCCCEEeecCCCccchhHHHHHHHhh
Q 018075          171 CRR-ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       171 l~~-~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~  247 (361)
                      +.. ..+++|++|+|-| +|++|+.+.|+||.+|. .||+...++||.++++. ||.+..++|.+. .+..+++++.   
T Consensus       145 f~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~afNYK~e-~~~~~aL~r~---  219 (343)
T KOG1196|consen  145 FYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKEE-SDLSAALKRC---  219 (343)
T ss_pred             HHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEEEecCChhhhhhhHhccCCccceeccCc-cCHHHHHHHh---
Confidence            865 8899999999998 69999999999999999 89999999999998866 699999998653 3666666553   


Q ss_pred             cCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC---ccee---chHhhhcCcEEEEeecC------CCcHHHH
Q 018075          248 MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE---MTVA---LTPAAAREVDVIGIFRY------RSTWPLC  315 (361)
Q Consensus       248 ~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~~~~---~~~~~~~~~~i~~~~~~------~~~~~~~  315 (361)
                      .+.|+|+.||.+|+. .++..+..|+..||++.+|+.+..   .+..   +...+.+++.+.++...      .+.+..+
T Consensus       220 ~P~GIDiYfeNVGG~-~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l  298 (343)
T KOG1196|consen  220 FPEGIDIYFENVGGK-MLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFL  298 (343)
T ss_pred             CCCcceEEEeccCcH-HHHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHH
Confidence            588999999999987 999999999999999999976521   1211   24467889999887543      5677889


Q ss_pred             HHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          316 IEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       316 ~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      ..++++|++.....+..  +|  +..+.||.-|-+|+..||.++.+
T Consensus       299 ~~~ikegKI~y~edi~~--Gl--en~P~A~vglf~GkNvGKqiv~v  340 (343)
T KOG1196|consen  299 LPYIKEGKITYVEDIAD--GL--ENGPSALVGLFHGKNVGKQLVKV  340 (343)
T ss_pred             HHHHhcCceEEehhHHH--HH--hccHHHHHHHhccCcccceEEEe
Confidence            99999999966555542  47  99999999999999999998864

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=99.88  E-value=7.3e-23  Score=156.53  Aligned_cols=109  Identities=39%  Similarity=0.745  Sum_probs=96.3

Q ss_pred             CCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCCcCCCCCccccCCCC
Q 018075           38 PQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSY  117 (361)
Q Consensus        38 ~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~  117 (361)
                      |+||+|||+++|||++|++.++|.  .......|+++|||++|+|+++|+++++|++||+|++.+...|+.|.+|..+.+
T Consensus         1 P~eVlVkv~a~gic~~D~~~~~g~--~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~   78 (109)
T PF08240_consen    1 PGEVLVKVRAAGICGSDLHIREGG--PPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRP   78 (109)
T ss_dssp             TTEEEEEEEEEEE-HHHHHHHTTS--SSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTG
T ss_pred             CCEEEEEEEEeeeCHHHHHHHhhc--cccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcc
Confidence            689999999999999999999874  223358899999999999999999999999999999988888999999999999


Q ss_pred             CCCCCccccCCCCCCCceeEEEEecCCceEEC
Q 018075          118 NLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKL  149 (361)
Q Consensus       118 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v  149 (361)
                      .+|++...++.. ..|+|+||+.+++++++|+
T Consensus        79 ~~c~~~~~~g~~-~~G~~aey~~v~~~~~~~v  109 (109)
T PF08240_consen   79 NLCPNPEVLGLG-LDGGFAEYVVVPARNLVPV  109 (109)
T ss_dssp             GGTTTBEETTTS-STCSSBSEEEEEGGGEEEE
T ss_pred             ccCCCCCEeEcC-CCCcccCeEEEehHHEEEC
Confidence            999998877754 7999999999999999875

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.71  E-value=2.9e-16  Score=124.07  Aligned_cols=128  Identities=28%  Similarity=0.557  Sum_probs=112.0

Q ss_pred             HHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHH
Q 018075          189 PIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTA  268 (361)
Q Consensus       189 ~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~  268 (361)
                      ++|++++|+||..|+ .|++++++++|+++++++|++.+++++.  .++.+.++++.  .+.++|+||||+|.+..++..
T Consensus         1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~--~~~~~~i~~~~--~~~~~d~vid~~g~~~~~~~~   75 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSD--DDFVEQIRELT--GGRGVDVVIDCVGSGDTLQEA   75 (130)
T ss_dssp             HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTT--SSHHHHHHHHT--TTSSEEEEEESSSSHHHHHHH
T ss_pred             ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccc--ccccccccccc--ccccceEEEEecCcHHHHHHH
Confidence            689999999999996 8999999999999999999999988654  45777777664  246899999999988899999


Q ss_pred             HHhhcCCCEEEEEccCC-CCcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHc
Q 018075          269 LNATRPGGKVCLIGLAK-TEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRS  321 (361)
Q Consensus       269 ~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~  321 (361)
                      +++++++|+++.+|... ...+++...++.+++++.+++.+ +++++++++++.+
T Consensus        76 ~~~l~~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~la~  130 (130)
T PF00107_consen   76 IKLLRPGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGSPEDFQEALQLLAQ  130 (130)
T ss_dssp             HHHEEEEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGGHHHHHHHHHHHH-
T ss_pred             HHHhccCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCCHHHHHHHHHHhcC
Confidence            99999999999999887 66678888899999999999988 4889999988764

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=99.43  E-value=8.8e-12  Score=115.46  Aligned_cols=172  Identities=19%  Similarity=0.296  Sum_probs=134.9

Q ss_pred             HHHHHHh-cC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHH
Q 018075          167 GVHACRR-AN-VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI  244 (361)
Q Consensus       167 a~~~l~~-~~-~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~  244 (361)
                      ++.++.+ .+ ..+|++|+|+|+|++|+.+++.++.+|+ .|++++.++.|.+.++++|+... .       ..+.   +
T Consensus       188 ~~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~-------~~e~---v  255 (413)
T cd00401         188 LIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-T-------MEEA---V  255 (413)
T ss_pred             hHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-c-------HHHH---H
Confidence            3455533 33 4789999999999999999999999999 68889999999999999998432 1       1111   1


Q ss_pred             HhhcCCCccEEEEccCChHHHHHH-HHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecCCC--cHH--HHHHHH
Q 018075          245 QNAMGSGIDVSFDCVGFDKTMSTA-LNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRS--TWP--LCIEFL  319 (361)
Q Consensus       245 ~~~~~~~~d~vld~~g~~~~~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~--~~~~~l  319 (361)
                           .++|+||++.|.+..+... ++.++++|+++.+|..  ..+++...+..+.+++.+...+..  .++  ..++++
T Consensus       256 -----~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~--~~eId~~~L~~~el~i~g~~~~~~~~~~~~g~aI~LL  328 (413)
T cd00401         256 -----KEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF--DVEIDVKGLKENAVEVVNIKPQVDRYELPDGRRIILL  328 (413)
T ss_pred             -----cCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC--CCccCHHHHHhhccEEEEccCCcceEEcCCcchhhhh
Confidence                 3689999999988777765 9999999999999855  346777778888999999887732  455  799999


Q ss_pred             HcCCC-CCCCceEEE-----ecCChh-hHHHHHHHHhcCCC-ceEEEE
Q 018075          320 RSGKI-DVKPLITHR-----FGFTQK-EIEDAFEISAQGGN-AIKVMF  359 (361)
Q Consensus       320 ~~g~~-~~~~~~~~~-----~~l~~~-~~~~a~~~l~~~~~-~gkvvi  359 (361)
                      ++|++ ++...+.+.     ++|  + ++.++++.+.++.. ..|+++
T Consensus       329 a~Grlvnl~~~~gH~~~vmd~sf--~~q~l~a~~l~~~~~~~~~kV~~  374 (413)
T cd00401         329 AEGRLVNLGCATGHPSFVMSNSF--TNQVLAQIELWTNRDKYEVGVYF  374 (413)
T ss_pred             hCcCCCCCcccCCCccceechhH--HHHHHHHHHHHhcCCcCCCcEEE
Confidence            99998 777777766     677  8 99999999887643 345554

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=99.43  E-value=3.7e-12  Score=120.89  Aligned_cols=155  Identities=16%  Similarity=0.230  Sum_probs=114.8

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEE-eecCCCc-----------cchhHHHHH
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET-AKVSTDI-----------EDVDTDVGK  243 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~-~~~~~~~-----------~~~~~~~~~  243 (361)
                      ..++++|+|+|+|++|+++++.|+.+|+ .|+++|.++++++.++++|++.+ ++..+..           .++.+...+
T Consensus       162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~  240 (509)
T PRK09424        162 KVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA  240 (509)
T ss_pred             CcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence            4689999999999999999999999999 79999999999999999999854 3321110           122222222


Q ss_pred             HHhhcCCCccEEEEccCChH-----H-HHHHHHhhcCCCEEEEEccC-CCC--cceechHhhh-cCcEEEEeecCCCcHH
Q 018075          244 IQNAMGSGIDVSFDCVGFDK-----T-MSTALNATRPGGKVCLIGLA-KTE--MTVALTPAAA-REVDVIGIFRYRSTWP  313 (361)
Q Consensus       244 ~~~~~~~~~d~vld~~g~~~-----~-~~~~~~~l~~~G~~v~~g~~-~~~--~~~~~~~~~~-~~~~i~~~~~~~~~~~  313 (361)
                      .......++|+||+|++.+.     . .++.++.+++||+++.++.. ++.  .+.+...++. +++++.|.++.+..+.
T Consensus       241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P~~~p  320 (509)
T PRK09424        241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLPSRLP  320 (509)
T ss_pred             HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCchhHH
Confidence            11111257999999999643     4 59999999999999999974 332  3333445554 8999999888766665


Q ss_pred             -HHHHHHHcCCCCCCCceE
Q 018075          314 -LCIEFLRSGKIDVKPLIT  331 (361)
Q Consensus       314 -~~~~~l~~g~~~~~~~~~  331 (361)
                       ++.+++.++.+++.+.++
T Consensus       321 ~~As~lla~~~i~l~~lIt  339 (509)
T PRK09424        321 TQSSQLYGTNLVNLLKLLC  339 (509)
T ss_pred             HHHHHHHHhCCccHHHHhc
Confidence             599999999886555554

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=99.30  E-value=2e-12  Score=101.59  Aligned_cols=117  Identities=29%  Similarity=0.392  Sum_probs=77.4

Q ss_pred             cCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccC--ChHHHHHHHHhhcCCCEEEEEccCCCCcceechHh--hh
Q 018075          222 LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG--FDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPA--AA  297 (361)
Q Consensus       222 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g--~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~--~~  297 (361)
                      ||++++++|..  .++         ..+.++|+|||++|  ++..+..++++| ++|+++.++.     .......  ..
T Consensus         1 LGAd~vidy~~--~~~---------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~-----~~~~~~~~~~~   63 (127)
T PF13602_consen    1 LGADEVIDYRD--TDF---------AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG-----DLPSFARRLKG   63 (127)
T ss_dssp             CT-SEEEETTC--SHH---------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S-----HHHHHHHHHHC
T ss_pred             CCcCEEecCCC--ccc---------cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC-----cccchhhhhcc
Confidence            68999998763  333         23679999999999  653446777888 9999999873     1001111  11


Q ss_pred             cCcEEEEeec------CCCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 018075          298 REVDVIGIFR------YRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF  359 (361)
Q Consensus       298 ~~~~i~~~~~------~~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi  359 (361)
                      ...+......      ..+.++++.+++++|++  ++.+.++|+|  +++.+|++.+++++..||+|+
T Consensus        64 ~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~l--~~~i~~~f~l--~~~~~A~~~l~~~~~~GKvVl  127 (127)
T PF13602_consen   64 RSIRYSFLFSVDPNAIRAEALEELAELVAEGKL--KPPIDRVFPL--EEAPEAHERLESGHARGKVVL  127 (127)
T ss_dssp             HHCEEECCC-H--HHHHHHHHHHHHHHHHTTSS-----EEEEEEG--GGHHHHHHHHHCT--SSEEEE
T ss_pred             cceEEEEEEecCCCchHHHHHHHHHHHHHCCCe--EEeeccEECH--HHHHHHHHHHHhCCCCCeEeC
Confidence            1222222221      13459999999999999  8888899999  999999999999999999986

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=98.74  E-value=1.5e-07  Score=84.01  Aligned_cols=172  Identities=17%  Similarity=0.249  Sum_probs=106.6

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-EEEEEeCChhHHHHHHHc----CCCEEeecCCCccchhHHHHHHHhh
Q 018075          173 RANVGPETNVMIMGSGPIGLVTLLAARAFGAP-RIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       173 ~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~-~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~  247 (361)
                      ...+++|++||.+|+|+ |..++++++..|.. .|++++.+++..+.+++.    +...+....   .++    ..+. .
T Consensus        72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~---~d~----~~l~-~  142 (272)
T PRK11873         72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRL---GEI----EALP-V  142 (272)
T ss_pred             hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEE---cch----hhCC-C
Confidence            35789999999999988 98888888888764 699999999988888764    332221111   121    1111 1


Q ss_pred             cCCCccEEEEcc------CChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEe-ecCCCcHHHHHHHHH
Q 018075          248 MGSGIDVSFDCV------GFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGI-FRYRSTWPLCIEFLR  320 (361)
Q Consensus       248 ~~~~~d~vld~~------g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~l~  320 (361)
                      ....||+|+...      +....++.+.+.|+|||+++..+..... ..+  ....+...+.+. ........+..++++
T Consensus       143 ~~~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~e~~~~l~  219 (272)
T PRK11873        143 ADNSVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRG-ELP--EEIRNDAELYAGCVAGALQEEEYLAMLA  219 (272)
T ss_pred             CCCceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccC-CCC--HHHHHhHHHHhccccCCCCHHHHHHHHH
Confidence            235799998643      2345799999999999999987754322 111  111111111111 112345667778888


Q ss_pred             cCCC-CCCCceEEEecCChhhHHHHHHHH--hcCCCceEEE
Q 018075          321 SGKI-DVKPLITHRFGFTQKEIEDAFEIS--AQGGNAIKVM  358 (361)
Q Consensus       321 ~g~~-~~~~~~~~~~~l~~~~~~~a~~~l--~~~~~~gkvv  358 (361)
                      +..+ .......+.+.+  ++..++++.+  ..+...++.+
T Consensus       220 ~aGf~~v~i~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~  258 (272)
T PRK11873        220 EAGFVDITIQPKREYRI--PDAREFLEDWGIAPGRQLDGYI  258 (272)
T ss_pred             HCCCCceEEEeccceec--ccHHHHHHHhccccccccCceE
Confidence            7544 223333345667  8888999888  5554444444

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.63  E-value=5e-07  Score=85.99  Aligned_cols=108  Identities=17%  Similarity=0.248  Sum_probs=80.6

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCC------------ccchhHHHHHH
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTD------------IEDVDTDVGKI  244 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~------------~~~~~~~~~~~  244 (361)
                      .++++|+|+|+|.+|+++++.++.+|+ .|++.+.+.++++.++++|++.+..-...            ..++.+...++
T Consensus       162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~  240 (511)
T TIGR00561       162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL  240 (511)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence            467999999999999999999999999 58899999999999999998763221100            01222222222


Q ss_pred             HhhcCCCccEEEEcc---CChH---HHHHHHHhhcCCCEEEEEccCC
Q 018075          245 QNAMGSGIDVSFDCV---GFDK---TMSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       245 ~~~~~~~~d~vld~~---g~~~---~~~~~~~~l~~~G~~v~~g~~~  285 (361)
                      ......++|++|+|+   |.+.   ..++.++.|++|+.++.+....
T Consensus       241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~  287 (511)
T TIGR00561       241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQ  287 (511)
T ss_pred             HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCC
Confidence            222246799999999   5443   6788899999999999987543

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=98.54  E-value=3.6e-06  Score=74.02  Aligned_cols=136  Identities=20%  Similarity=0.292  Sum_probs=87.7

Q ss_pred             ceeEEEEecCCceEECCCCCCcccccccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075          134 SLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  213 (361)
Q Consensus       134 ~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~  213 (361)
                      +|.+|.. +...++++++++++..+... +.......+.. .++++++||-+|||. |..++.+++ .|+..++++|.++
T Consensus        78 ~~~~~~~-~~~~~i~i~p~~afgtg~h~-tt~~~l~~l~~-~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDis~  152 (250)
T PRK00517         78 SWEDPPD-PDEINIELDPGMAFGTGTHP-TTRLCLEALEK-LVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDIDP  152 (250)
T ss_pred             CCcCCCC-CCeEEEEECCCCccCCCCCH-HHHHHHHHHHh-hcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEECCH
Confidence            4555544 66788999999998876522 22222333332 257899999999988 888876555 6776799999999


Q ss_pred             hHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccCCh---HHHHHHHHhhcCCCEEEEEccCC
Q 018075          214 QRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD---KTMSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       214 ~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~~g~~~  285 (361)
                      ...+.+++.-....+.   ..-.       +.. +...||+|+.+....   ..++.+.+.|+|||+++..|...
T Consensus       153 ~~l~~A~~n~~~~~~~---~~~~-------~~~-~~~~fD~Vvani~~~~~~~l~~~~~~~LkpgG~lilsgi~~  216 (250)
T PRK00517        153 QAVEAARENAELNGVE---LNVY-------LPQ-GDLKADVIVANILANPLLELAPDLARLLKPGGRLILSGILE  216 (250)
T ss_pred             HHHHHHHHHHHHcCCC---ceEE-------Ecc-CCCCcCEEEEcCcHHHHHHHHHHHHHhcCCCcEEEEEECcH
Confidence            9888776632111000   0000       000 012699999766533   24567888999999999876543

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=98.47  E-value=1.9e-06  Score=71.83  Aligned_cols=106  Identities=16%  Similarity=0.213  Sum_probs=80.3

Q ss_pred             HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChh----HHHHHHHcCCCEEeecCCCccchhHHH
Q 018075          166 VGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ----RLSIARNLGADETAKVSTDIEDVDTDV  241 (361)
Q Consensus       166 ~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~----~~~~~~~lg~~~~~~~~~~~~~~~~~~  241 (361)
                      ....+++...+++|++||-+|+|. |+.++-+++..+  +|+++++.++    ....++.+|..++.....   |-...+
T Consensus        60 ~vA~m~~~L~~~~g~~VLEIGtGs-GY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~g---DG~~G~  133 (209)
T COG2518          60 MVARMLQLLELKPGDRVLEIGTGS-GYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYENVTVRHG---DGSKGW  133 (209)
T ss_pred             HHHHHHHHhCCCCCCeEEEECCCc-hHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCceEEEEC---CcccCC
Confidence            334456778899999999999988 999999999998  6999999887    444467788865443322   211111


Q ss_pred             HHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEc
Q 018075          242 GKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       242 ~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      .     ...+||.++-+.+.+..-+.+++.|++||+++..-
T Consensus       134 ~-----~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~Pv  169 (209)
T COG2518         134 P-----EEAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIPV  169 (209)
T ss_pred             C-----CCCCcCEEEEeeccCCCCHHHHHhcccCCEEEEEE
Confidence            1     13689999998888877789999999999999853

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.32  E-value=1.1e-05  Score=75.34  Aligned_cols=103  Identities=23%  Similarity=0.270  Sum_probs=79.2

Q ss_pred             HHHHHHhc-CCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHH
Q 018075          167 GVHACRRA-NVG-PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI  244 (361)
Q Consensus       167 a~~~l~~~-~~~-~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~  244 (361)
                      +|.++.+. ++. .|++|+|+|.|.+|..+++.++.+|+ .|++++.++.+...+...|+.. .       +..    +.
T Consensus       198 ~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~v-~-------~l~----ea  264 (425)
T PRK05476        198 LLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFRV-M-------TME----EA  264 (425)
T ss_pred             hHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCEe-c-------CHH----HH
Confidence            45666553 554 89999999999999999999999999 6888988888876666667542 1       111    12


Q ss_pred             HhhcCCCccEEEEccCChHHHH-HHHHhhcCCCEEEEEccCCC
Q 018075          245 QNAMGSGIDVSFDCVGFDKTMS-TALNATRPGGKVCLIGLAKT  286 (361)
Q Consensus       245 ~~~~~~~~d~vld~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~  286 (361)
                      .    .++|+++++.|....+. ..+..+++++.++.+|....
T Consensus       265 l----~~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d~  303 (425)
T PRK05476        265 A----ELGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFDN  303 (425)
T ss_pred             H----hCCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCCC
Confidence            1    36999999999876665 68899999999998886653

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=98.31  E-value=2.8e-06  Score=77.19  Aligned_cols=108  Identities=20%  Similarity=0.302  Sum_probs=81.6

Q ss_pred             CceEECCCCCCcccccccchhHHHHHHHHhcCC----CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHH-HH
Q 018075          144 KLCYKLPDNVSLEEGAMCEPLSVGVHACRRANV----GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRL-SI  218 (361)
Q Consensus       144 ~~~~~vP~~~~~~~aa~~~~~~~a~~~l~~~~~----~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~-~~  218 (361)
                      ...+++|+.+..+.++...+.+.++.+++.+..    .++.+|+|+|+|.+|..+++.++..|...|+.++++.++. ++
T Consensus       139 ~~a~~~~k~vr~et~i~~~~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~l  218 (311)
T cd05213         139 QKAIKVGKRVRTETGISRGAVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEEL  218 (311)
T ss_pred             HHHHHHHHHHhhhcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence            457788999999988877788888877755332    4799999999999999999999988887888898988764 78


Q ss_pred             HHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccCChHH
Q 018075          219 ARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKT  264 (361)
Q Consensus       219 ~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~  264 (361)
                      ++++|.. ...+    .+..+.   +     ..+|+||.+++.+..
T Consensus       219 a~~~g~~-~~~~----~~~~~~---l-----~~aDvVi~at~~~~~  251 (311)
T cd05213         219 AKELGGN-AVPL----DELLEL---L-----NEADVVISATGAPHY  251 (311)
T ss_pred             HHHcCCe-EEeH----HHHHHH---H-----hcCCEEEECCCCCch
Confidence            8888873 2221    111111   1     358999999998743

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.31  E-value=3.3e-05  Score=69.54  Aligned_cols=113  Identities=15%  Similarity=0.211  Sum_probs=83.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      .+.+++|+|.|.+|..+++.++.+|+ .|.+.+++.++.+.++++|+..+. +    .+    +.+.    -.++|+||+
T Consensus       151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~~~-~----~~----l~~~----l~~aDiVI~  216 (296)
T PRK08306        151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSPFH-L----SE----LAEE----VGKIDIIFN  216 (296)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeeec-H----HH----HHHH----hCCCCEEEE
Confidence            68999999999999999999999999 788888998888888888875421 1    11    1111    247999999


Q ss_pred             ccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEee
Q 018075          258 CVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIF  306 (361)
Q Consensus       258 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~  306 (361)
                      +++..-.....++.+++++.++.+....+...+  .....++++..+..
T Consensus       217 t~p~~~i~~~~l~~~~~g~vIIDla~~pggtd~--~~a~~~Gv~~~~~~  263 (296)
T PRK08306        217 TIPALVLTKEVLSKMPPEALIIDLASKPGGTDF--EYAEKRGIKALLAP  263 (296)
T ss_pred             CCChhhhhHHHHHcCCCCcEEEEEccCCCCcCe--eehhhCCeEEEEEC
Confidence            988654556778899999999988866554443  23334555555443

>TIGR00936 ahcY adenosylhomocysteinase

Probab=98.15  E-value=5.5e-05  Score=70.41  Aligned_cols=102  Identities=24%  Similarity=0.270  Sum_probs=77.7

Q ss_pred             HHHHHHh-cC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHH
Q 018075          167 GVHACRR-AN-VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI  244 (361)
Q Consensus       167 a~~~l~~-~~-~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~  244 (361)
                      ++.++.+ .+ ...|++|+|+|.|.+|..+++.++.+|+ .|++++.++.+...+...|+.. .       +..+.+   
T Consensus       181 ~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~v-~-------~leeal---  248 (406)
T TIGR00936       181 TIDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFRV-M-------TMEEAA---  248 (406)
T ss_pred             HHHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCEe-C-------CHHHHH---
Confidence            3444433 33 4789999999999999999999999999 6888988888877777777632 1       111111   


Q ss_pred             HhhcCCCccEEEEccCChHHHHH-HHHhhcCCCEEEEEccCC
Q 018075          245 QNAMGSGIDVSFDCVGFDKTMST-ALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       245 ~~~~~~~~d~vld~~g~~~~~~~-~~~~l~~~G~~v~~g~~~  285 (361)
                           .+.|++|++.|....+.. .+..+++++.++.+|...
T Consensus       249 -----~~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~~  285 (406)
T TIGR00936       249 -----KIGDIFITATGNKDVIRGEHFENMKDGAIVANIGHFD  285 (406)
T ss_pred             -----hcCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence                 357999999998866664 889999999999888654

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=98.02  E-value=3.3e-07  Score=86.51  Aligned_cols=158  Identities=19%  Similarity=0.251  Sum_probs=101.2

Q ss_pred             ccCcceeEEEEEeCCCCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEE---C
Q 018075           73 VIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYK---L  149 (361)
Q Consensus        73 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---v  149 (361)
                      .-|.|+++.+.+|++++++     +|++.+.. ||+|..|+.    .|.+....+ ...++.|++++.+.. .+..   +
T Consensus        89 ~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a~~----~a~~~~~~g-~~l~~lf~~a~~~~k-~vr~~t~i  156 (417)
T TIGR01035        89 LTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNAYK----VAQEEKTVG-KVLERLFQKAFSVGK-RVRTETDI  156 (417)
T ss_pred             cCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHHHH----HHHHcCCch-HHHHHHHHHHHHHhh-hhhhhcCC
Confidence            5789999999999999876     55555555 788887732    233222222 134677888877665 2221   2


Q ss_pred             -CCCCCcccccccchhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHH-HHHHHcCCCE
Q 018075          150 -PDNVSLEEGAMCEPLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRL-SIARNLGADE  226 (361)
Q Consensus       150 -P~~~~~~~aa~~~~~~~a~~~l-~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~-~~~~~lg~~~  226 (361)
                       +..++.        ...|.... +.....++++|+|+|+|.+|..+++.++..|+..|++++++.++. ++++++|...
T Consensus       157 ~~~~vSv--------~~~Av~la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~~  228 (417)
T TIGR01035       157 SAGAVSI--------SSAAVELAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGEA  228 (417)
T ss_pred             CCCCcCH--------HHHHHHHHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCeE
Confidence             111221        11122222 234457889999999999999999999999976888888888774 4777787642


Q ss_pred             EeecCCCccchhHHHHHHHhhcCCCccEEEEccCChH
Q 018075          227 TAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDK  263 (361)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~  263 (361)
                       +.+    .+..    +.    -.++|+||+|++.+.
T Consensus       229 -i~~----~~l~----~~----l~~aDvVi~aT~s~~  252 (417)
T TIGR01035       229 -VKF----EDLE----EY----LAEADIVISSTGAPH  252 (417)
T ss_pred             -eeH----HHHH----HH----HhhCCEEEECCCCCC
Confidence             221    1111    11    136999999998764

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PLN02494 adenosylhomocysteinase

Probab=97.96  E-value=0.00014  Score=68.43  Aligned_cols=101  Identities=25%  Similarity=0.273  Sum_probs=77.7

Q ss_pred             HHHHHh-cCC-CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHH
Q 018075          168 VHACRR-ANV-GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       168 ~~~l~~-~~~-~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~  245 (361)
                      +.++.+ .++ -.|++|+|+|.|.+|..+++.++.+|+ .|++++.++.+...+...|+...        +..+.+    
T Consensus       241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~vv--------~leEal----  307 (477)
T PLN02494        241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQVL--------TLEDVV----  307 (477)
T ss_pred             HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCeec--------cHHHHH----
Confidence            455533 333 679999999999999999999999999 68889888877666766776421        111221    


Q ss_pred             hhcCCCccEEEEccCChHH-HHHHHHhhcCCCEEEEEccCC
Q 018075          246 NAMGSGIDVSFDCVGFDKT-MSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       246 ~~~~~~~d~vld~~g~~~~-~~~~~~~l~~~G~~v~~g~~~  285 (361)
                          ...|+++++.|.... ....++.|++++.++.+|...
T Consensus       308 ----~~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~  344 (477)
T PLN02494        308 ----SEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFD  344 (477)
T ss_pred             ----hhCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCCC
Confidence                358999999998754 488999999999999998754

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=97.94  E-value=8e-05  Score=66.90  Aligned_cols=128  Identities=18%  Similarity=0.257  Sum_probs=79.8

Q ss_pred             CCceEECCCCCCcccccccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc
Q 018075          143 AKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL  222 (361)
Q Consensus       143 ~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l  222 (361)
                      ....+.+.+++.+....- ++.......+... .+++++||-+|||. |..++.+++ .|+..+++++.++...+.+++.
T Consensus       126 ~~~~i~ldpg~aFgtG~h-~tt~l~l~~l~~~-~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n  201 (288)
T TIGR00406       126 DALIIMLDPGLAFGTGTH-PTTSLCLEWLEDL-DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKN  201 (288)
T ss_pred             CcEEEEECCCCcccCCCC-HHHHHHHHHHHhh-cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHH
Confidence            455667777766654322 1222223334332 46889999999988 888877776 5776899999999887776653


Q ss_pred             ----CCCE-EeecCCCccchhHHHHHHHhhcCCCccEEEEccCCh---HHHHHHHHhhcCCCEEEEEccC
Q 018075          223 ----GADE-TAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD---KTMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       223 ----g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~~g~~  284 (361)
                          +... +.....   +.       ......+||+|+......   ..+..+.+.|+|||+++..|..
T Consensus       202 ~~~n~~~~~~~~~~~---~~-------~~~~~~~fDlVvan~~~~~l~~ll~~~~~~LkpgG~li~sgi~  261 (288)
T TIGR00406       202 AELNQVSDRLQVKLI---YL-------EQPIEGKADVIVANILAEVIKELYPQFSRLVKPGGWLILSGIL  261 (288)
T ss_pred             HHHcCCCcceEEEec---cc-------ccccCCCceEEEEecCHHHHHHHHHHHHHHcCCCcEEEEEeCc
Confidence                2211 111111   10       001135799999865433   3566778999999999987654

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]

Probab=97.92  E-value=0.00014  Score=64.40  Aligned_cols=141  Identities=19%  Similarity=0.257  Sum_probs=87.5

Q ss_pred             ceeEEEEecCCceEECCCCCCcccccccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075          134 SLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  213 (361)
Q Consensus       134 ~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~  213 (361)
                      +|.+|..-....++++.+++.+-...-. +......++++ .+++|.+||=+|||+ |.++|..+| +|+.+++++|.++
T Consensus       120 sw~~~~~~~~~~~i~lDPGlAFGTG~Hp-TT~lcL~~Le~-~~~~g~~vlDvGcGS-GILaIAa~k-LGA~~v~g~DiDp  195 (300)
T COG2264         120 SWREYPEPSDELNIELDPGLAFGTGTHP-TTSLCLEALEK-LLKKGKTVLDVGCGS-GILAIAAAK-LGAKKVVGVDIDP  195 (300)
T ss_pred             CCccCCCCCCceEEEEccccccCCCCCh-hHHHHHHHHHH-hhcCCCEEEEecCCh-hHHHHHHHH-cCCceEEEecCCH
Confidence            4555433334678888888876543211 11222333443 357999999999987 888887666 7887899999999


Q ss_pred             hHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccCCh---HHHHHHHHhhcCCCEEEEEccCCC
Q 018075          214 QRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD---KTMSTALNATRPGGKVCLIGLAKT  286 (361)
Q Consensus       214 ~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~~g~~~~  286 (361)
                      ...+.+++    -+......  ........   ..   .++.+|+|+-..=..   ...+++.+.++|+|++++.|....
T Consensus       196 ~AV~aa~eNa~~N~v~~~~~--~~~~~~~~---~~---~~~~~DvIVANILA~vl~~La~~~~~~lkpgg~lIlSGIl~~  267 (300)
T COG2264         196 QAVEAARENARLNGVELLVQ--AKGFLLLE---VP---ENGPFDVIVANILAEVLVELAPDIKRLLKPGGRLILSGILED  267 (300)
T ss_pred             HHHHHHHHHHHHcCCchhhh--cccccchh---hc---ccCcccEEEehhhHHHHHHHHHHHHHHcCCCceEEEEeehHh
Confidence            77666655    22321000  00001100   01   136899999876433   356677889999999999886543

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=97.91  E-value=0.00021  Score=58.41  Aligned_cols=102  Identities=22%  Similarity=0.284  Sum_probs=73.1

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH----HHcCCCEEeecCCCccchhHHHHHHHh
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADETAKVSTDIEDVDTDVGKIQN  246 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~~~~~~~  246 (361)
                      +....+++|+.++=+|||. |..++++++..-..+++++++++++.+..    ++||.+.+.....   +..+.+.+   
T Consensus        27 ls~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g---~Ap~~L~~---   99 (187)
T COG2242          27 LSKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEG---DAPEALPD---   99 (187)
T ss_pred             HHhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEec---cchHhhcC---
Confidence            3457889999888888766 66778888655555899999999887655    5588776554432   33333322   


Q ss_pred             hcCCCccEEEEccCCh--HHHHHHHHhhcCCCEEEEE
Q 018075          247 AMGSGIDVSFDCVGFD--KTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       247 ~~~~~~d~vld~~g~~--~~~~~~~~~l~~~G~~v~~  281 (361)
                        ...+|.+|---|..  ..++.+|..|+++|++|.-
T Consensus       100 --~~~~daiFIGGg~~i~~ile~~~~~l~~ggrlV~n  134 (187)
T COG2242         100 --LPSPDAIFIGGGGNIEEILEAAWERLKPGGRLVAN  134 (187)
T ss_pred             --CCCCCEEEECCCCCHHHHHHHHHHHcCcCCeEEEE
Confidence              12699999755432  5788999999999999864

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.90  E-value=0.00012  Score=68.04  Aligned_cols=97  Identities=19%  Similarity=0.354  Sum_probs=67.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHH-HcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  256 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  256 (361)
                      ++.+|+|+|+|.+|+.+++.++.+|+ .|++++++.++.+.+. .++......+ .   +. +.+.+.    -.++|++|
T Consensus       166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~-~---~~-~~l~~~----l~~aDvVI  235 (370)
T TIGR00518       166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRY-S---NA-YEIEDA----VKRADLLI  235 (370)
T ss_pred             CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEecc-C---CH-HHHHHH----HccCCEEE
Confidence            44669999999999999999999999 6888998888876654 4554321111 1   11 112222    14799999


Q ss_pred             EccCC-----hH-HHHHHHHhhcCCCEEEEEccC
Q 018075          257 DCVGF-----DK-TMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       257 d~~g~-----~~-~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      ++++.     +. .....++.+++++.++.++..
T Consensus       236 ~a~~~~g~~~p~lit~~~l~~mk~g~vIvDva~d  269 (370)
T TIGR00518       236 GAVLIPGAKAPKLVSNSLVAQMKPGAVIVDVAID  269 (370)
T ss_pred             EccccCCCCCCcCcCHHHHhcCCCCCEEEEEecC
Confidence            99732     11 247788889999999998854

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=97.86  E-value=0.00027  Score=59.82  Aligned_cols=102  Identities=17%  Similarity=0.310  Sum_probs=71.5

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEeCChhHHHHHH----HcC-CCEEeecCCCccchhHHHHHH
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIAR----NLG-ADETAKVSTDIEDVDTDVGKI  244 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~-~~vv~v~~~~~~~~~~~----~lg-~~~~~~~~~~~~~~~~~~~~~  244 (361)
                      +....+.++++||.+|+|. |..++.+++..+. ..+++++.+++..+.++    +++ .+.+....   .+..+.+.. 
T Consensus        33 l~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~---~d~~~~l~~-  107 (198)
T PRK00377         33 LSKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK---GEAPEILFT-  107 (198)
T ss_pred             HHHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE---echhhhHhh-
Confidence            4557889999999999988 9999999988653 37999999998877654    356 33332221   222222222 


Q ss_pred             HhhcCCCccEEEEccCC---hHHHHHHHHhhcCCCEEEE
Q 018075          245 QNAMGSGIDVSFDCVGF---DKTMSTALNATRPGGKVCL  280 (361)
Q Consensus       245 ~~~~~~~~d~vld~~g~---~~~~~~~~~~l~~~G~~v~  280 (361)
                         ....+|.||...+.   ...++.+.+.|+|+|+++.
T Consensus       108 ---~~~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~  143 (198)
T PRK00377        108 ---INEKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVI  143 (198)
T ss_pred             ---cCCCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEE
Confidence               13579999985543   3467788899999999985

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=97.86  E-value=8.2e-05  Score=63.19  Aligned_cols=104  Identities=19%  Similarity=0.270  Sum_probs=70.6

Q ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-EEEEEeCChhHHH----HHHHcCCCEEeecCCCccchhHHHHH
Q 018075          169 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAP-RIIITDVDVQRLS----IARNLGADETAKVSTDIEDVDTDVGK  243 (361)
Q Consensus       169 ~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~-~vv~v~~~~~~~~----~~~~lg~~~~~~~~~~~~~~~~~~~~  243 (361)
                      ..++...+++|++||-+|+|. |+.++-+++..|.. .|++++..++-.+    .+++++.+.+.....   +....+. 
T Consensus        63 ~~l~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~g---dg~~g~~-  137 (209)
T PF01135_consen   63 RMLEALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVG---DGSEGWP-  137 (209)
T ss_dssp             HHHHHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES----GGGTTG-
T ss_pred             HHHHHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEc---chhhccc-
Confidence            355667899999999999887 89999999998854 5899998886444    344466654332222   2111111 


Q ss_pred             HHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEE
Q 018075          244 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       244 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~  281 (361)
                          ...+||.++-+.+.+......++.|++||+++..
T Consensus       138 ----~~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~p  171 (209)
T PF01135_consen  138 ----EEAPFDRIIVTAAVPEIPEALLEQLKPGGRLVAP  171 (209)
T ss_dssp             ----GG-SEEEEEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred             ----cCCCcCEEEEeeccchHHHHHHHhcCCCcEEEEE
Confidence                1357999999888887778899999999999984

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.84  E-value=4.1e-05  Score=72.61  Aligned_cols=159  Identities=18%  Similarity=0.276  Sum_probs=98.3

Q ss_pred             ccCcceeEEEEEeCCCCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCC
Q 018075           73 VIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDN  152 (361)
Q Consensus        73 ~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~  152 (361)
                      .-|+|+++.+.+|+++.++.-.|+.=+      |++|...+    ..|...+..+ ...++.|++.        +++|+.
T Consensus        91 ~~g~ea~~hl~~V~~GldS~V~GE~qI------lgQvk~a~----~~a~~~g~~g-~~l~~lf~~a--------~~~~k~  151 (423)
T PRK00045         91 HEGEEAVRHLFRVASGLDSMVLGEPQI------LGQVKDAY----ALAQEAGTVG-TILNRLFQKA--------FSVAKR  151 (423)
T ss_pred             cCCHHHHHHHHHHHhhhhhhhcCChHH------HHHHHHHH----HHHHHcCCch-HHHHHHHHHH--------HHHHhh
Confidence            479999999999999988754454322      33333111    0111111000 0112333332        344555


Q ss_pred             CCcccccccchhHHHHHHHHhcC----CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCCEE
Q 018075          153 VSLEEGAMCEPLSVGVHACRRAN----VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADET  227 (361)
Q Consensus       153 ~~~~~aa~~~~~~~a~~~l~~~~----~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~  227 (361)
                      +..+.+..-.+.++++.+++.+.    -.++++|+|+|+|.+|.++++.++..|+..+++++++.++.+ +++++|.. .
T Consensus       152 v~~~t~i~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~  230 (423)
T PRK00045        152 VRTETGIGAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-A  230 (423)
T ss_pred             HhhhcCCCCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-E
Confidence            55444444446677777775422    267899999999999999999999999877888888888754 77888853 2


Q ss_pred             eecCCCccchhHHHHHHHhhcCCCccEEEEccCChH
Q 018075          228 AKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDK  263 (361)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~  263 (361)
                      +.+    .+.    .+.    -.++|+||+|++.+.
T Consensus       231 ~~~----~~~----~~~----l~~aDvVI~aT~s~~  254 (423)
T PRK00045        231 IPL----DEL----PEA----LAEADIVISSTGAPH  254 (423)
T ss_pred             eeH----HHH----HHH----hccCCEEEECCCCCC
Confidence            221    111    111    146999999998763

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.79  E-value=0.0003  Score=63.03  Aligned_cols=99  Identities=15%  Similarity=0.193  Sum_probs=71.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      .|.+++|+|.|.+|.+++..++.+|+ .|.+.++++++.+.+.+.|...+ .       +. .+.+.    -.++|+|++
T Consensus       150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~~~-~-------~~-~l~~~----l~~aDiVin  215 (287)
T TIGR02853       150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLIPF-P-------LN-KLEEK----VAEIDIVIN  215 (287)
T ss_pred             CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeee-c-------HH-HHHHH----hccCCEEEE
Confidence            57899999999999999999999999 68888888887777666665421 1       11 11122    247999999


Q ss_pred             ccCChHHHHHHHHhhcCCCEEEEEccCCCCcce
Q 018075          258 CVGFDKTMSTALNATRPGGKVCLIGLAKTEMTV  290 (361)
Q Consensus       258 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~  290 (361)
                      +++..-.-...++.++++..++.++.......+
T Consensus       216 t~P~~ii~~~~l~~~k~~aliIDlas~Pg~tdf  248 (287)
T TIGR02853       216 TIPALVLTADVLSKLPKHAVIIDLASKPGGTDF  248 (287)
T ss_pred             CCChHHhCHHHHhcCCCCeEEEEeCcCCCCCCH
Confidence            987542235577888998888888765554333

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=97.75  E-value=2.5e-05  Score=77.05  Aligned_cols=81  Identities=21%  Similarity=0.380  Sum_probs=57.1

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC---------------------hhHHHHHHHcCCCEEeecCCC
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD---------------------VQRLSIARNLGADETAKVSTD  233 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~---------------------~~~~~~~~~lg~~~~~~~~~~  233 (361)
                      ..++|++|+|+|+|+.|+++++.++..|+ .|++++..                     +.+.+.++++|++..++....
T Consensus       133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~  211 (564)
T PRK12771        133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG  211 (564)
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence            46789999999999999999999999999 47777642                     346677888998755432110


Q ss_pred             ccchhHHHHHHHhhcCCCccEEEEccCChH
Q 018075          234 IEDVDTDVGKIQNAMGSGIDVSFDCVGFDK  263 (361)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~d~vld~~g~~~  263 (361)
                       .+..  ...+    ..++|+||+++|...
T Consensus       212 -~~~~--~~~~----~~~~D~Vi~AtG~~~  234 (564)
T PRK12771        212 -EDIT--LEQL----EGEFDAVFVAIGAQL  234 (564)
T ss_pred             -CcCC--HHHH----HhhCCEEEEeeCCCC
Confidence             1211  1112    236999999999763

>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences

Probab=97.75  E-value=0.00011  Score=65.54  Aligned_cols=139  Identities=21%  Similarity=0.367  Sum_probs=81.7

Q ss_pred             ceeEEEEecCCceEECCCCCCcccccccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075          134 SLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  213 (361)
Q Consensus       134 ~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~  213 (361)
                      +|.++-..+.+.++.+.+++.|-..--. +...+...++.. .++|++||=+|+|+ |.+++.-++ +|+..|+++|.++
T Consensus       119 ~w~~~~~~~~~~~I~idPg~AFGTG~H~-TT~lcl~~l~~~-~~~g~~vLDvG~GS-GILaiaA~k-lGA~~v~a~DiDp  194 (295)
T PF06325_consen  119 SWEEYPEPPDEIVIEIDPGMAFGTGHHP-TTRLCLELLEKY-VKPGKRVLDVGCGS-GILAIAAAK-LGAKKVVAIDIDP  194 (295)
T ss_dssp             TT----SSTTSEEEEESTTSSS-SSHCH-HHHHHHHHHHHH-SSTTSEEEEES-TT-SHHHHHHHH-TTBSEEEEEESSC
T ss_pred             CCcccCCCCCcEEEEECCCCcccCCCCH-HHHHHHHHHHHh-ccCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEecCCH
Confidence            3455522355677888888877554322 222233444443 68899999999766 666666555 6998999999999


Q ss_pred             hHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccCChH---HHHHHHHhhcCCCEEEEEccCCC
Q 018075          214 QRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDK---TMSTALNATRPGGKVCLIGLAKT  286 (361)
Q Consensus       214 ~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~---~~~~~~~~l~~~G~~v~~g~~~~  286 (361)
                      ...+.+++    -|....+.... ..+.          ...+||+|+-..-.+-   ....+.+.|+++|.+++.|....
T Consensus       195 ~Av~~a~~N~~~N~~~~~~~v~~-~~~~----------~~~~~dlvvANI~~~vL~~l~~~~~~~l~~~G~lIlSGIl~~  263 (295)
T PF06325_consen  195 LAVEAARENAELNGVEDRIEVSL-SEDL----------VEGKFDLVVANILADVLLELAPDIASLLKPGGYLILSGILEE  263 (295)
T ss_dssp             HHHHHHHHHHHHTT-TTCEEESC-TSCT----------CCS-EEEEEEES-HHHHHHHHHHCHHHEEEEEEEEEEEEEGG
T ss_pred             HHHHHHHHHHHHcCCCeeEEEEE-eccc----------ccccCCEEEECCCHHHHHHHHHHHHHhhCCCCEEEEccccHH
Confidence            87666654    23322221111 1111          1368999998877552   34445567899999999886654


Q ss_pred             C
Q 018075          287 E  287 (361)
Q Consensus       287 ~  287 (361)
                      .
T Consensus       264 ~  264 (295)
T PF06325_consen  264 Q  264 (295)
T ss_dssp             G
T ss_pred             H
Confidence            3

Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.73  E-value=0.00052  Score=62.26  Aligned_cols=103  Identities=22%  Similarity=0.282  Sum_probs=73.5

Q ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEeCChhHHHHHH----HcCCCEEeecCCCccchhHHHHHH
Q 018075          170 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIAR----NLGADETAKVSTDIEDVDTDVGKI  244 (361)
Q Consensus       170 ~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~-~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~  244 (361)
                      .++...++++++||.+|+|. |..++.+++..+. ..|++++.+++..+.++    +.|.+.+....   .+..+...  
T Consensus        72 ll~~L~i~~g~~VLDIG~Gt-G~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~---gD~~~~~~--  145 (322)
T PRK13943         72 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVC---GDGYYGVP--  145 (322)
T ss_pred             HHHhcCCCCCCEEEEEeCCc-cHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe---CChhhccc--
Confidence            34556789999999999985 9999999998864 26899999998665554    46665443322   22222111  


Q ss_pred             HhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEE
Q 018075          245 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       245 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~  281 (361)
                         ....+|+|+.+.+........++.|+++|+++..
T Consensus       146 ---~~~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~  179 (322)
T PRK13943        146 ---EFAPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  179 (322)
T ss_pred             ---ccCCccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence               1246999999888765667788999999998874

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.72  E-value=0.001  Score=56.99  Aligned_cols=103  Identities=15%  Similarity=0.225  Sum_probs=71.1

Q ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHH
Q 018075          170 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKI  244 (361)
Q Consensus       170 ~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~  244 (361)
                      .+...++++|++||-+|+|. |..++.+++..+. ..|++++.+++-.+.+++    .|...+.....   +.....   
T Consensus        68 ~~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~g---d~~~~~---  140 (212)
T PRK13942         68 MCELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVG---DGTLGY---  140 (212)
T ss_pred             HHHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEEC---CcccCC---
Confidence            44557789999999999877 7788888888763 379999999987766654    34432221111   111110   


Q ss_pred             HhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEE
Q 018075          245 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       245 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~  281 (361)
                        ....+||+|+-+.......+.+.+.|++||+++..
T Consensus       141 --~~~~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~  175 (212)
T PRK13942        141 --EENAPYDRIYVTAAGPDIPKPLIEQLKDGGIMVIP  175 (212)
T ss_pred             --CcCCCcCEEEECCCcccchHHHHHhhCCCcEEEEE
Confidence              01357999987655555778889999999999875

>PRK08324 short chain dehydrogenase; Validated

Probab=97.69  E-value=0.00042  Score=70.05  Aligned_cols=141  Identities=19%  Similarity=0.270  Sum_probs=86.0

Q ss_pred             CceeEEEEecCCceEECCCCCCcccccccchhHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeC
Q 018075          133 GSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDV  211 (361)
Q Consensus       133 g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~  211 (361)
                      .++.+|..+++..++.+ +.++.++|.+..        .-.....+|+++||.| +|++|.+.++.+...|+ .|+.+++
T Consensus       385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~--------~~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~r  454 (681)
T PRK08324        385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQR--------MPKPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLADL  454 (681)
T ss_pred             hhcCCccCCChhhhcce-eeehhhhhhhhc--------CCCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEeC
Confidence            45667777777777766 666666664110        0012234689999998 69999999999999999 6888888


Q ss_pred             ChhHHHHH-HHcCC--C-EEeecC-CCccchhHHHHHHHhhcCCCccEEEEccCCh------------------------
Q 018075          212 DVQRLSIA-RNLGA--D-ETAKVS-TDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD------------------------  262 (361)
Q Consensus       212 ~~~~~~~~-~~lg~--~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~------------------------  262 (361)
                      +.++.+.+ ++++.  . ..+..+ .+..+..+.+.++... .+++|++|++.|..                        
T Consensus       455 ~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~-~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~  533 (681)
T PRK08324        455 DEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALA-FGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGH  533 (681)
T ss_pred             CHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHH-cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHH
Confidence            88765543 33443  1 111111 2222333333333322 34799999999821                        


Q ss_pred             -HHHHHHHHhhcC---CCEEEEEccC
Q 018075          263 -KTMSTALNATRP---GGKVCLIGLA  284 (361)
Q Consensus       263 -~~~~~~~~~l~~---~G~~v~~g~~  284 (361)
                       ..++.+.+.++.   +|+++.++..
T Consensus       534 ~~l~~~~~~~l~~~~~~g~iV~vsS~  559 (681)
T PRK08324        534 FLVAREAVRIMKAQGLGGSIVFIASK  559 (681)
T ss_pred             HHHHHHHHHHHHhcCCCcEEEEECCc
Confidence             123444555655   6899988754

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=97.61  E-value=0.00028  Score=53.53  Aligned_cols=93  Identities=24%  Similarity=0.369  Sum_probs=63.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHH-cCCCEEEEEeCChhHHHHHHHcC----C-CEEeecCCCccchhHHHHHHHhhcCCC
Q 018075          178 PETNVMIMGSGPIGLVTLLAARA-FGAPRIIITDVDVQRLSIARNLG----A-DETAKVSTDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~-~g~~~vv~v~~~~~~~~~~~~lg----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (361)
                      ||.+||-+|+|. |..++.+++. .++ ++++++.+++..+.+++.-    . +.+....   .++ ..    ......+
T Consensus         1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~---~d~-~~----~~~~~~~   70 (112)
T PF12847_consen    1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQ---GDA-EF----DPDFLEP   70 (112)
T ss_dssp             TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEE---SCC-HG----GTTTSSC
T ss_pred             CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEE---Ccc-cc----CcccCCC
Confidence            689999999887 8888888885 566 7999999999887776532    2 2222111   222 11    1112457


Q ss_pred             ccEEEEcc-CC----h-----HHHHHHHHhhcCCCEEEE
Q 018075          252 IDVSFDCV-GF----D-----KTMSTALNATRPGGKVCL  280 (361)
Q Consensus       252 ~d~vld~~-g~----~-----~~~~~~~~~l~~~G~~v~  280 (361)
                      ||+|+... ..    .     ..++.+.+.|+|||+++.
T Consensus        71 ~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi  109 (112)
T PF12847_consen   71 FDLVICSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVI  109 (112)
T ss_dssp             EEEEEECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             CCEEEECCCccccccchhHHHHHHHHHHHhcCCCcEEEE
Confidence            99999977 21    1     137889999999999986

...

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=97.59  E-value=0.002  Score=49.69  Aligned_cols=102  Identities=20%  Similarity=0.281  Sum_probs=68.9

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhh
Q 018075          172 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       172 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~  247 (361)
                      ....+++++++|-+|+|. |..+..+++..+...+++++.++...+.+++    ++...+.....   +.......    
T Consensus        13 ~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~---~~~~~~~~----   84 (124)
T TIGR02469        13 SKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEG---DAPEALED----   84 (124)
T ss_pred             HHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEec---cccccChh----
Confidence            445677889999999987 8889999998765579999999987766543    44433221111   11110111    


Q ss_pred             cCCCccEEEEccCCh---HHHHHHHHhhcCCCEEEEE
Q 018075          248 MGSGIDVSFDCVGFD---KTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       248 ~~~~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~~  281 (361)
                      ....+|+|+...+..   ..++.+.+.|+++|+++..
T Consensus        85 ~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~  121 (124)
T TIGR02469        85 SLPEPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLN  121 (124)
T ss_pred             hcCCCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEE
Confidence            135799999765432   3688899999999999864

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=97.59  E-value=0.0012  Score=62.47  Aligned_cols=93  Identities=20%  Similarity=0.286  Sum_probs=71.9

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      .-.|++|+|+|.|.+|..+++.++.+|+ .|++++.++.+...+...|+...        ++.+    +.    ...|+|
T Consensus       251 ~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~~--------~lee----ll----~~ADIV  313 (476)
T PTZ00075        251 MIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQVV--------TLED----VV----ETADIF  313 (476)
T ss_pred             CcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCceec--------cHHH----HH----hcCCEE
Confidence            4589999999999999999999999999 68888777776655555565321        1222    21    368999


Q ss_pred             EEccCChHHHH-HHHHhhcCCCEEEEEccCC
Q 018075          256 FDCVGFDKTMS-TALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       256 ld~~g~~~~~~-~~~~~l~~~G~~v~~g~~~  285 (361)
                      +.+.|....+. ..+..|++++.++-+|...
T Consensus       314 I~atGt~~iI~~e~~~~MKpGAiLINvGr~d  344 (476)
T PTZ00075        314 VTATGNKDIITLEHMRRMKNNAIVGNIGHFD  344 (476)
T ss_pred             EECCCcccccCHHHHhccCCCcEEEEcCCCc
Confidence            99999875554 7999999999999988664

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=97.58  E-value=0.0017  Score=55.65  Aligned_cols=103  Identities=16%  Similarity=0.173  Sum_probs=69.3

Q ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHH
Q 018075          170 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKI  244 (361)
Q Consensus       170 ~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~  244 (361)
                      .++...++++++||-+|+|. |..++.+++..+. ..|++++.+++..+.+++    +|.+.+.....   +......  
T Consensus        69 ~~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~---d~~~~~~--  142 (215)
T TIGR00080        69 MTELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVG---DGTQGWE--  142 (215)
T ss_pred             HHHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEEC---CcccCCc--
Confidence            34556789999999999877 7777888887653 259999999887665543    45443322211   1111110  


Q ss_pred             HhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEE
Q 018075          245 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       245 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~  281 (361)
                         ...+||+|+-+.......+.+.+.|++||+++..
T Consensus       143 ---~~~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~  176 (215)
T TIGR00080       143 ---PLAPYDRIYVTAAGPKIPEALIDQLKEGGILVMP  176 (215)
T ss_pred             ---ccCCCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence               1357999886655455677888999999999875

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>PRK14967 putative methyltransferase; Provisional

Probab=97.51  E-value=0.0023  Score=55.28  Aligned_cols=99  Identities=24%  Similarity=0.355  Sum_probs=66.1

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHh
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQN  246 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~  246 (361)
                      +....++++++||-.|||. |..++.+++. +...+++++.+++..+.+++    .+....+. .   .++.+.   +  
T Consensus        29 l~~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~-~---~d~~~~---~--   97 (223)
T PRK14967         29 LAAEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVR-R---GDWARA---V--   97 (223)
T ss_pred             HHhcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEE-E---Cchhhh---c--
Confidence            4455678999999999988 8888888875 55579999999987775554    34322111 1   233221   1  


Q ss_pred             hcCCCccEEEEccCC---------------------------hHHHHHHHHhhcCCCEEEEE
Q 018075          247 AMGSGIDVSFDCVGF---------------------------DKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       247 ~~~~~~d~vld~~g~---------------------------~~~~~~~~~~l~~~G~~v~~  281 (361)
                       ....||+|+...+-                           ...+..+.+.|++||+++.+
T Consensus        98 -~~~~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~  158 (223)
T PRK14967         98 -EFRPFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLV  158 (223)
T ss_pred             -cCCCeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence             13579999975210                           11345677899999999865

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.50  E-value=0.00066  Score=53.60  Aligned_cols=74  Identities=20%  Similarity=0.297  Sum_probs=53.4

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCC--EEeecCCCccchhHHHHHHHhhcCCCcc
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGAD--ETAKVSTDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      -++.++||+|+|+.|.+++..+...|++.+..+.++.+|.+ ++++++..  ..+.+.    +..+    .    -..+|
T Consensus        10 l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~----~~~~----~----~~~~D   77 (135)
T PF01488_consen   10 LKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLE----DLEE----A----LQEAD   77 (135)
T ss_dssp             GTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGG----GHCH----H----HHTES
T ss_pred             cCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHH----HHHH----H----HhhCC
Confidence            46899999999999999999999999988999999988765 55566432  122221    2211    1    14699


Q ss_pred             EEEEccCCh
Q 018075          254 VSFDCVGFD  262 (361)
Q Consensus       254 ~vld~~g~~  262 (361)
                      +||+|++.+
T Consensus        78 ivI~aT~~~   86 (135)
T PF01488_consen   78 IVINATPSG   86 (135)
T ss_dssp             EEEE-SSTT
T ss_pred             eEEEecCCC
Confidence            999998866

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.49  E-value=0.0036  Score=53.26  Aligned_cols=103  Identities=15%  Similarity=0.198  Sum_probs=69.2

Q ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHHH----cCCCE-EeecCCCccchhHHHHH
Q 018075          170 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADE-TAKVSTDIEDVDTDVGK  243 (361)
Q Consensus       170 ~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~-~~~~~~~~~~~~~~~~~  243 (361)
                      .++...++++++||-+|+|. |..++.+++..+ ...|++++.+++-.+.+++    .+... +....   .+..+.+. 
T Consensus        64 ~~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~---~d~~~~~~-  138 (205)
T PRK13944         64 MCELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYH---GDGKRGLE-  138 (205)
T ss_pred             HHHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEE---CCcccCCc-
Confidence            34556789999999999877 778888888764 2379999999886655543    44321 11111   12111111 


Q ss_pred             HHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEE
Q 018075          244 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       244 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~  281 (361)
                          ....||.|+-+.......+.+.+.|++||+++..
T Consensus       139 ----~~~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~  172 (205)
T PRK13944        139 ----KHAPFDAIIVTAAASTIPSALVRQLKDGGVLVIP  172 (205)
T ss_pred             ----cCCCccEEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence                1357999988766555667888999999999874

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=97.31  E-value=0.0014  Score=58.17  Aligned_cols=99  Identities=21%  Similarity=0.398  Sum_probs=60.4

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHH----HcCCCEEeecCCCccchhHHHHHHHh
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGADETAKVSTDIEDVDTDVGKIQN  246 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~  246 (361)
                      ++++++++|++||-+|||- |-.++.+|+..|+ .|++++.+++-.+.++    +.|...-+.+..  .++.    ++  
T Consensus        55 ~~~~~l~~G~~vLDiGcGw-G~~~~~~a~~~g~-~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~--~D~~----~~--  124 (273)
T PF02353_consen   55 CEKLGLKPGDRVLDIGCGW-GGLAIYAAERYGC-HVTGITLSEEQAEYARERIREAGLEDRVEVRL--QDYR----DL--  124 (273)
T ss_dssp             HTTTT--TT-EEEEES-TT-SHHHHHHHHHH---EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEE--S-GG----G---
T ss_pred             HHHhCCCCCCEEEEeCCCc-cHHHHHHHHHcCc-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE--eecc----cc--
Confidence            4568999999999999874 7788889998899 7999999998776654    455332111111  1221    12  


Q ss_pred             hcCCCccEEEE-----ccCCh---HHHHHHHHhhcCCCEEEEE
Q 018075          247 AMGSGIDVSFD-----CVGFD---KTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       247 ~~~~~~d~vld-----~~g~~---~~~~~~~~~l~~~G~~v~~  281 (361)
                        ..+||.|+.     .+|..   ..++.+.+.|+|||+++.-
T Consensus       125 --~~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq  165 (273)
T PF02353_consen  125 --PGKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQ  165 (273)
T ss_dssp             ----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEE
T ss_pred             --CCCCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEE
Confidence              238999865     44432   4578888999999999754

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=97.28  E-value=0.0029  Score=59.15  Aligned_cols=99  Identities=18%  Similarity=0.292  Sum_probs=70.0

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCC
Q 018075          172 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       172 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (361)
                      +..++++|++||.+|||. |..++.+++..|+ .|++++.+++..+.+++......+.+..  .++    ..+    ...
T Consensus       161 ~~l~l~~g~rVLDIGcG~-G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~--~D~----~~l----~~~  228 (383)
T PRK11705        161 RKLQLKPGMRVLDIGCGW-GGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRL--QDY----RDL----NGQ  228 (383)
T ss_pred             HHhCCCCCCEEEEeCCCc-cHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEE--Cch----hhc----CCC
Confidence            557889999999999865 7788889988888 7999999999998887754221111111  122    111    357


Q ss_pred             ccEEEEc-----cCC---hHHHHHHHHhhcCCCEEEEEc
Q 018075          252 IDVSFDC-----VGF---DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       252 ~d~vld~-----~g~---~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ||.|+..     +|.   +..++.+.+.|+|||+++...
T Consensus       229 fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~  267 (383)
T PRK11705        229 FDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT  267 (383)
T ss_pred             CCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            9998753     332   246788889999999998754

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=97.27  E-value=0.0045  Score=54.55  Aligned_cols=103  Identities=18%  Similarity=0.329  Sum_probs=71.8

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCC-EEeecCCCccchhHHHHHHH
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGAD-ETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~~~~~~  245 (361)
                      ++..+++||++||=+|||- |-+++-.|+..|+ .|++++.+++-.+.+++    .|.. .+-....+       .+.+ 
T Consensus        65 ~~kl~L~~G~~lLDiGCGW-G~l~~~aA~~y~v-~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d-------~rd~-  134 (283)
T COG2230          65 LEKLGLKPGMTLLDIGCGW-GGLAIYAAEEYGV-TVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQD-------YRDF-  134 (283)
T ss_pred             HHhcCCCCCCEEEEeCCCh-hHHHHHHHHHcCC-EEEEeeCCHHHHHHHHHHHHHcCCCcccEEEecc-------cccc-
Confidence            3568999999999999987 7888999999999 79999999987666554    5544 22111111       2222 


Q ss_pred             hhcCCCccEEEE-----ccCC---hHHHHHHHHhhcCCCEEEEEccCCC
Q 018075          246 NAMGSGIDVSFD-----CVGF---DKTMSTALNATRPGGKVCLIGLAKT  286 (361)
Q Consensus       246 ~~~~~~~d~vld-----~~g~---~~~~~~~~~~l~~~G~~v~~g~~~~  286 (361)
                         ...||-|..     .+|.   +.-+..+-+.|+|+|+++.-.....
T Consensus       135 ---~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~~  180 (283)
T COG2230         135 ---EEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITGP  180 (283)
T ss_pred             ---ccccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecCC
Confidence               234887743     5554   2456778889999999988765443

>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function

Probab=97.23  E-value=0.05  Score=48.80  Aligned_cols=98  Identities=14%  Similarity=0.222  Sum_probs=67.0

Q ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHH-HcCCCEEEEEeCChhHHHHHHHcCC-CEEeecCCCccchhHHHHHHHhhcCCCc
Q 018075          176 VGPETNVMIMG-SGPIGLVTLLAAR-AFGAPRIIITDVDVQRLSIARNLGA-DETAKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       176 ~~~g~~vlI~G-~g~~G~~ai~la~-~~g~~~vv~v~~~~~~~~~~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      .-..+.|+|.+ ++-+++.++..++ ..+..++|++++. .+..+.+.+|+ +.++.|++        +.++   ....-
T Consensus       133 ~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglTS~-~N~~Fve~lg~Yd~V~~Yd~--------i~~l---~~~~~  200 (314)
T PF11017_consen  133 FFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLTSA-RNVAFVESLGCYDEVLTYDD--------IDSL---DAPQP  200 (314)
T ss_pred             cCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEecC-cchhhhhccCCceEEeehhh--------hhhc---cCCCC
Confidence            34446667777 5788888888887 5666589999664 45558899995 56666532        2222   23566


Q ss_pred             cEEEEccCChHHHHHHHHhhcCCC-EEEEEccCC
Q 018075          253 DVSFDCVGFDKTMSTALNATRPGG-KVCLIGLAK  285 (361)
Q Consensus       253 d~vld~~g~~~~~~~~~~~l~~~G-~~v~~g~~~  285 (361)
                      -+++|..|.......+..+++..= ..+.+|...
T Consensus       201 ~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th  234 (314)
T PF11017_consen  201 VVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATH  234 (314)
T ss_pred             EEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccC
Confidence            789999999988888888887754 345566443

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=97.23  E-value=0.01  Score=50.87  Aligned_cols=82  Identities=26%  Similarity=0.359  Sum_probs=56.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCC--CE--EeecCCCccchhHHHHHHHhhcCCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGA--DE--TAKVSTDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~  251 (361)
                      +++.++|.| ++++|.+.++.....|+ +++.+.+..++++ ++.+++.  ..  ..++ .+..+....+..+.. .-+.
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DV-tD~~~~~~~i~~~~~-~~g~   81 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDV-TDRAAVEAAIEALPE-EFGR   81 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeecc-CCHHHHHHHHHHHHH-hhCc
Confidence            457788999 58999999999999999 6888888888876 5566773  12  2232 233344445554433 2357


Q ss_pred             ccEEEEccCCh
Q 018075          252 IDVSFDCVGFD  262 (361)
Q Consensus       252 ~d~vld~~g~~  262 (361)
                      +|+.++..|..
T Consensus        82 iDiLvNNAGl~   92 (246)
T COG4221          82 IDILVNNAGLA   92 (246)
T ss_pred             ccEEEecCCCC
Confidence            99999988754

>PRK07402 precorrin-6B methylase; Provisional

Probab=97.23  E-value=0.011  Score=49.81  Aligned_cols=104  Identities=13%  Similarity=0.280  Sum_probs=64.7

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHh
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQN  246 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~  246 (361)
                      +...+++++++||=+|+|. |..++.+++......+++++.+++..+.+++    ++...+....   .+..+.+..+  
T Consensus        33 ~~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~---~d~~~~~~~~--  106 (196)
T PRK07402         33 ISQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIE---GSAPECLAQL--  106 (196)
T ss_pred             HHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEE---CchHHHHhhC--
Confidence            3446778999999898765 5566677766543479999999987766654    5554332221   2222222111  


Q ss_pred             hcCCCccE-EEEccCC-hHHHHHHHHhhcCCCEEEEEc
Q 018075          247 AMGSGIDV-SFDCVGF-DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       247 ~~~~~~d~-vld~~g~-~~~~~~~~~~l~~~G~~v~~g  282 (361)
                        ...+|. .++.... ...++.+.+.|+|||+++...
T Consensus       107 --~~~~d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~  142 (196)
T PRK07402        107 --APAPDRVCIEGGRPIKEILQAVWQYLKPGGRLVATA  142 (196)
T ss_pred             --CCCCCEEEEECCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence              122344 4443222 257888999999999998874

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=97.17  E-value=0.0051  Score=51.36  Aligned_cols=98  Identities=18%  Similarity=0.250  Sum_probs=64.8

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhhcCC
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (361)
                      .++++.+||-+|||. |..++.+++......|++++.+++..+.+++    .+.+.+.....   +..+    +..  ..
T Consensus        42 ~l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~~---d~~~----~~~--~~  111 (187)
T PRK00107         42 YLPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVVHG---RAEE----FGQ--EE  111 (187)
T ss_pred             hcCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEec---cHhh----CCC--CC
Confidence            355689999999876 7777777776544479999999887665543    45443222211   2211    111  35


Q ss_pred             CccEEEEccCC--hHHHHHHHHhhcCCCEEEEEc
Q 018075          251 GIDVSFDCVGF--DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       251 ~~d~vld~~g~--~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      .+|+|+.....  +..++.+.+.|+|||+++.+-
T Consensus       112 ~fDlV~~~~~~~~~~~l~~~~~~LkpGG~lv~~~  145 (187)
T PRK00107        112 KFDVVTSRAVASLSDLVELCLPLLKPGGRFLALK  145 (187)
T ss_pred             CccEEEEccccCHHHHHHHHHHhcCCCeEEEEEe
Confidence            79999974322  246778889999999999873

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.14  E-value=0.015  Score=50.47  Aligned_cols=105  Identities=19%  Similarity=0.201  Sum_probs=66.1

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcC---CCEEeecC-CCccchhHHHHHHHhhcCCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLG---ADETAKVS-TDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  251 (361)
                      +++++||.| +|.+|..+++.+...|+ .|+.+++++++.+.+ +++.   ....+..+ .+..+....+.+.... -.+
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~   81 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKV-LNA   81 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHH-hCC
Confidence            468999998 59999999999999999 577888877766544 3332   11222211 1222333333333221 246


Q ss_pred             ccEEEEccCCh-----------------------HHHHHHHHhhcCCCEEEEEccC
Q 018075          252 IDVSFDCVGFD-----------------------KTMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       252 ~d~vld~~g~~-----------------------~~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      +|.++.+.+..                       ...+...+.+..+|+++.++..
T Consensus        82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~  137 (238)
T PRK05786         82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSM  137 (238)
T ss_pred             CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecc
Confidence            89999988742                       1244556667788999988754

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=97.12  E-value=0.0098  Score=51.36  Aligned_cols=108  Identities=19%  Similarity=0.357  Sum_probs=76.4

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCC----CEEeecCCCccchhHHHHHHHhh
Q 018075          172 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA----DETAKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       172 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~----~~~~~~~~~~~~~~~~~~~~~~~  247 (361)
                      .....++|++||=+|||. |-.|..+++..|-..|+++|-+++-++.+++--.    .. +.+..  .+.. .   +. .
T Consensus        45 ~~~~~~~g~~vLDva~GT-Gd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~--~dAe-~---LP-f  115 (238)
T COG2226          45 SLLGIKPGDKVLDVACGT-GDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVV--GDAE-N---LP-F  115 (238)
T ss_pred             HhhCCCCCCEEEEecCCc-cHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEE--echh-h---CC-C
Confidence            345666999999998776 8999999999986689999999998877765322    21 11111  1111 1   11 1


Q ss_pred             cCCCccEEEEccCCh------HHHHHHHHhhcCCCEEEEEccCCCCc
Q 018075          248 MGSGIDVSFDCVGFD------KTMSTALNATRPGGKVCLIGLAKTEM  288 (361)
Q Consensus       248 ~~~~~d~vld~~g~~------~~~~~~~~~l~~~G~~v~~g~~~~~~  288 (361)
                      ....||+|..+.|-.      ..+.++.|.|+|||+++.+.......
T Consensus       116 ~D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~p~~  162 (238)
T COG2226         116 PDNSFDAVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSKPDN  162 (238)
T ss_pred             CCCccCEEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCCCCc
Confidence            256799998766533      47889999999999999998776543

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=97.10  E-value=0.0054  Score=52.30  Aligned_cols=95  Identities=21%  Similarity=0.299  Sum_probs=66.5

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEE--eecCCCccchhHHHHHHHhhcCCCccE
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET--AKVSTDIEDVDTDVGKIQNAMGSGIDV  254 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~d~  254 (361)
                      -+|.+||=+|||+ |.++.-+|+ +|+ .|.++|-+++..+.++.-.....  ++|..      ..+.++.. .+..||+
T Consensus        58 l~g~~vLDvGCGg-G~Lse~mAr-~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~------~~~edl~~-~~~~FDv  127 (243)
T COG2227          58 LPGLRVLDVGCGG-GILSEPLAR-LGA-SVTGIDASEKPIEVAKLHALESGVNIDYRQ------ATVEDLAS-AGGQFDV  127 (243)
T ss_pred             CCCCeEEEecCCc-cHhhHHHHH-CCC-eeEEecCChHHHHHHHHhhhhccccccchh------hhHHHHHh-cCCCccE
Confidence            5899999999877 777777777 778 79999999999888875332221  22321      23333433 2478999


Q ss_pred             EEE-----ccCChH-HHHHHHHhhcCCCEEEEE
Q 018075          255 SFD-----CVGFDK-TMSTALNATRPGGKVCLI  281 (361)
Q Consensus       255 vld-----~~g~~~-~~~~~~~~l~~~G~~v~~  281 (361)
                      |+.     .+..++ .+..+.+.++|+|.+..-
T Consensus       128 V~cmEVlEHv~dp~~~~~~c~~lvkP~G~lf~S  160 (243)
T COG2227         128 VTCMEVLEHVPDPESFLRACAKLVKPGGILFLS  160 (243)
T ss_pred             EEEhhHHHccCCHHHHHHHHHHHcCCCcEEEEe
Confidence            976     455553 567788999999987654

>PRK05993 short chain dehydrogenase; Provisional

Probab=97.10  E-value=0.0055  Score=54.71  Aligned_cols=81  Identities=19%  Similarity=0.233  Sum_probs=55.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEE-eecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.++++.++.+.+.+.+...+ .++ .+..+....+.++....++.+|++
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl-~d~~~~~~~~~~~~~~~~g~id~l   80 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDY-AEPESIAALVAQVLELSGGRLDAL   80 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccC-CCHHHHHHHHHHHHHHcCCCccEE
Confidence            467899998 59999999998888899 68888888887776666564432 232 222334444444433234579999


Q ss_pred             EEccC
Q 018075          256 FDCVG  260 (361)
Q Consensus       256 ld~~g  260 (361)
                      +++.|
T Consensus        81 i~~Ag   85 (277)
T PRK05993         81 FNNGA   85 (277)
T ss_pred             EECCC
Confidence            99876

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.08  E-value=0.011  Score=49.41  Aligned_cols=112  Identities=18%  Similarity=0.273  Sum_probs=74.5

Q ss_pred             CCCEEEEEC-C-CHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCCE-EeecCCCccchhHHHHHHHhhcCCCcc
Q 018075          178 PETNVMIMG-S-GPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADE-TAKVSTDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       178 ~g~~vlI~G-~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      ....|||.| + |++|.+.+.-....|+ .|+++.++-++-. +..++|... -+++ +++++..+...++++...++.|
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV-~~~~~V~~v~~evr~~~~Gkld   83 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDV-SKPEEVVTVSGEVRANPDGKLD   83 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEecc-CChHHHHHHHHHHhhCCCCceE
Confidence            346789998 3 8999999998888999 6888877777654 444788533 2333 3445566666666655567899


Q ss_pred             EEEEccCCh----------HHHHHHH----------------HhhcCCCEEEEEccCCCCccee
Q 018075          254 VSFDCVGFD----------KTMSTAL----------------NATRPGGKVCLIGLAKTEMTVA  291 (361)
Q Consensus       254 ~vld~~g~~----------~~~~~~~----------------~~l~~~G~~v~~g~~~~~~~~~  291 (361)
                      +.++..|.+          +..+..+                ...+..|++|.+|....-.+++
T Consensus        84 ~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfp  147 (289)
T KOG1209|consen   84 LLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFP  147 (289)
T ss_pred             EEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccc
Confidence            999988755          1111111                2346779999998765444433

>TIGR00438 rrmJ cell division protein FtsJ

Probab=97.05  E-value=0.013  Score=49.04  Aligned_cols=101  Identities=19%  Similarity=0.277  Sum_probs=60.1

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCc
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      ..+++|++||.+|+|+-+ .+..+++.. +...+++++.+++.    ...+... +..+.........+.+.  ....++
T Consensus        28 ~~i~~g~~VLDiG~GtG~-~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~-~~~d~~~~~~~~~l~~~--~~~~~~   99 (188)
T TIGR00438        28 KLIKPGDTVLDLGAAPGG-WSQVAVEQVGGKGRVIAVDLQPMK----PIENVDF-IRGDFTDEEVLNKIRER--VGDDKV   99 (188)
T ss_pred             cccCCCCEEEEecCCCCH-HHHHHHHHhCCCceEEEEeccccc----cCCCceE-EEeeCCChhHHHHHHHH--hCCCCc
Confidence            567999999999988744 444445443 44479999998754    1123322 21111111111222221  134579


Q ss_pred             cEEEEcc-----CC------------hHHHHHHHHhhcCCCEEEEEc
Q 018075          253 DVSFDCV-----GF------------DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       253 d~vld~~-----g~------------~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      |+|+...     |.            ...++.+.+.|+|||+++...
T Consensus       100 D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~  146 (188)
T TIGR00438       100 DVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV  146 (188)
T ss_pred             cEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence            9999631     21            246777899999999998753

>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed

Probab=97.05  E-value=0.018  Score=49.21  Aligned_cols=102  Identities=15%  Similarity=0.102  Sum_probs=65.7

Q ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHH
Q 018075          170 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       170 ~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~  245 (361)
                      .+...+++++++||-+|+|. |..+..+++.. . .+++++.+++..+.+++    ++...+.....   +..+...   
T Consensus        70 l~~~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~-~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~---d~~~~~~---  140 (212)
T PRK00312         70 MTELLELKPGDRVLEIGTGS-GYQAAVLAHLV-R-RVFSVERIKTLQWEAKRRLKQLGLHNVSVRHG---DGWKGWP---  140 (212)
T ss_pred             HHHhcCCCCCCEEEEECCCc-cHHHHHHHHHh-C-EEEEEeCCHHHHHHHHHHHHHCCCCceEEEEC---CcccCCC---
Confidence            34557789999999999865 55666666654 3 69999999877665544    34433211111   1111110   


Q ss_pred             hhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEc
Q 018075          246 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       246 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g  282 (361)
                        ....||+|+.........+.+.+.|++||+++..-
T Consensus       141 --~~~~fD~I~~~~~~~~~~~~l~~~L~~gG~lv~~~  175 (212)
T PRK00312        141 --AYAPFDRILVTAAAPEIPRALLEQLKEGGILVAPV  175 (212)
T ss_pred             --cCCCcCEEEEccCchhhhHHHHHhcCCCcEEEEEE
Confidence              12579999876555556778889999999988653

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=97.01  E-value=0.019  Score=50.38  Aligned_cols=84  Identities=21%  Similarity=0.278  Sum_probs=54.9

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcCC----C-EEeecCC-CccchhHHHHHHHhhc
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGA----D-ETAKVST-DIEDVDTDVGKIQNAM  248 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~----~-~~~~~~~-~~~~~~~~~~~~~~~~  248 (361)
                      ..+.++||.| ++++|...+..+...|. .++.+.++++|++.+ +++.-    . .++..+- +..+......++ ...
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l-~~~   81 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDEL-KER   81 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHH-Hhc
Confidence            4678999999 58999999999988999 578888989887644 33432    1 2333221 222222222222 223


Q ss_pred             CCCccEEEEccCCh
Q 018075          249 GSGIDVSFDCVGFD  262 (361)
Q Consensus       249 ~~~~d~vld~~g~~  262 (361)
                      +..+|+.+++.|..
T Consensus        82 ~~~IdvLVNNAG~g   95 (265)
T COG0300          82 GGPIDVLVNNAGFG   95 (265)
T ss_pred             CCcccEEEECCCcC
Confidence            45899999999865

>PRK12742 oxidoreductase; Provisional

Probab=97.01  E-value=0.013  Score=50.71  Aligned_cols=101  Identities=21%  Similarity=0.298  Sum_probs=60.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEE-eCChhHH-HHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccE
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIIT-DVDVQRL-SIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV  254 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v-~~~~~~~-~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  254 (361)
                      ++.++||.| +|++|.+.++.+...|++ ++.+ .+++++. ++.++++...+ ..+.  .+... +.+.... ..++|+
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~~-v~~~~~~~~~~~~~l~~~~~~~~~-~~D~--~~~~~-~~~~~~~-~~~id~   78 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGAN-VRFTYAGSKDAAERLAQETGATAV-QTDS--ADRDA-VIDVVRK-SGALDI   78 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEecCCCHHHHHHHHHHhCCeEE-ecCC--CCHHH-HHHHHHH-hCCCcE
Confidence            478999998 599999999999889995 5544 3344443 34455565432 2221  22222 2222221 246999


Q ss_pred             EEEccCChH-------------------------HHHHHHHhhcCCCEEEEEccC
Q 018075          255 SFDCVGFDK-------------------------TMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       255 vld~~g~~~-------------------------~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      ++++.|...                         ..+.+.+.+..+|+++.++..
T Consensus        79 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~  133 (237)
T PRK12742         79 LVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSV  133 (237)
T ss_pred             EEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecc
Confidence            999987420                         113444556678999988754

>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]

Probab=96.90  E-value=0.018  Score=49.60  Aligned_cols=106  Identities=23%  Similarity=0.378  Sum_probs=73.9

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHH
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~  245 (361)
                      +...++.||++|+=.|+|+ |.+++-||+..|- -.|+..+..++..+.|++    +|..+.+.+.  ..|..+..    
T Consensus        87 ~~~~gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~--~~Dv~~~~----  159 (256)
T COG2519          87 VARLGISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLK--LGDVREGI----  159 (256)
T ss_pred             HHHcCCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEE--eccccccc----
Confidence            4568899999999999877 8888899998875 579999999887776654    4543321111  12222111    


Q ss_pred             hhcCCCccEEE-EccCChHHHHHHHHhhcCCCEEEEEccCC
Q 018075          246 NAMGSGIDVSF-DCVGFDKTMSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       246 ~~~~~~~d~vl-d~~g~~~~~~~~~~~l~~~G~~v~~g~~~  285 (361)
                        .+..+|.++ |--.....++.+.+.|.|||.++++...-
T Consensus       160 --~~~~vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y~P~v  198 (256)
T COG2519         160 --DEEDVDAVFLDLPDPWNVLEHVSDALKPGGVVVVYSPTV  198 (256)
T ss_pred             --cccccCEEEEcCCChHHHHHHHHHHhCCCcEEEEEcCCH
Confidence              134788775 55444478999999999999999885443

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.90  E-value=0.0089  Score=49.60  Aligned_cols=90  Identities=21%  Similarity=0.230  Sum_probs=62.4

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  256 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  256 (361)
                      -.|.+|.|+|.|.+|...+++++.+|+ +|++.+++..........+...        .++.+.+        ...|+|+
T Consensus        34 l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~~~~--------~~l~ell--------~~aDiv~   96 (178)
T PF02826_consen   34 LRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFGVEY--------VSLDELL--------AQADIVS   96 (178)
T ss_dssp             STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTTEEE--------SSHHHHH--------HH-SEEE
T ss_pred             cCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhccccccee--------eehhhhc--------chhhhhh
Confidence            368999999999999999999999999 7999988887766455555422        1333332        2488998


Q ss_pred             EccCChH-----HHHHHHHhhcCCCEEEEEcc
Q 018075          257 DCVGFDK-----TMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       257 d~~g~~~-----~~~~~~~~l~~~G~~v~~g~  283 (361)
                      .+.....     .-.+.+..|+++..+|-++.
T Consensus        97 ~~~plt~~T~~li~~~~l~~mk~ga~lvN~aR  128 (178)
T PF02826_consen   97 LHLPLTPETRGLINAEFLAKMKPGAVLVNVAR  128 (178)
T ss_dssp             E-SSSSTTTTTSBSHHHHHTSTTTEEEEESSS
T ss_pred             hhhccccccceeeeeeeeeccccceEEEeccc
Confidence            8776321     23456788888887776543

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=96.89  E-value=0.011  Score=54.60  Aligned_cols=96  Identities=15%  Similarity=0.217  Sum_probs=63.6

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcC---CCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075          180 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG---ADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  256 (361)
Q Consensus       180 ~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  256 (361)
                      .+|||+|+|.+|+.+++.+...+-..|..++++.++...+....   .. ...++.  .+... +.++.    .++|+||
T Consensus         2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~-~~~vD~--~d~~a-l~~li----~~~d~VI   73 (389)
T COG1748           2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVE-ALQVDA--ADVDA-LVALI----KDFDLVI   73 (389)
T ss_pred             CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccce-eEEecc--cChHH-HHHHH----hcCCEEE
Confidence            47899999999999999988888447899999988887776653   22 122222  22222 22222    3569999


Q ss_pred             EccCChHHHHHHHHhhcCCCEEEEEcc
Q 018075          257 DCVGFDKTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       257 d~~g~~~~~~~~~~~l~~~G~~v~~g~  283 (361)
                      ++.+..-...-+-.++..|=.++....
T Consensus        74 n~~p~~~~~~i~ka~i~~gv~yvDts~  100 (389)
T COG1748          74 NAAPPFVDLTILKACIKTGVDYVDTSY  100 (389)
T ss_pred             EeCCchhhHHHHHHHHHhCCCEEEccc
Confidence            999976444334456666666666553

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.88  E-value=0.023  Score=50.26  Aligned_cols=112  Identities=22%  Similarity=0.262  Sum_probs=68.2

Q ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHH----HHHHHcCCCE-EeecC---CCccchhHHHHHHHhhc
Q 018075          178 PETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRL----SIARNLGADE-TAKVS---TDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       178 ~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~----~~~~~lg~~~-~~~~~---~~~~~~~~~~~~~~~~~  248 (361)
                      .|..|+|.|| +++|.+.+.-.-..|+..+.++ +..++.    +.+++.+... ++.+.   ++.++..+....+.. .
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lva-r~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~-~   88 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVA-RRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIR-H   88 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEee-hhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHH-h
Confidence            5788999995 8999888887777999644444 445444    4445555443 33222   223334334333322 3


Q ss_pred             CCCccEEEEccCCh-------------------------HHHHHHHHhhcCC--CEEEEEccCCCCccee
Q 018075          249 GSGIDVSFDCVGFD-------------------------KTMSTALNATRPG--GKVCLIGLAKTEMTVA  291 (361)
Q Consensus       249 ~~~~d~vld~~g~~-------------------------~~~~~~~~~l~~~--G~~v~~g~~~~~~~~~  291 (361)
                      -+++|+.+++.|-.                         ...+.++++|.+.  |+++.++...+...++
T Consensus        89 fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P  158 (282)
T KOG1205|consen   89 FGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLP  158 (282)
T ss_pred             cCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCC
Confidence            46899999988754                         1345566666544  9999998665544433

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.83  E-value=0.026  Score=54.26  Aligned_cols=103  Identities=17%  Similarity=0.273  Sum_probs=63.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCh--hH-HHHHHHcCCCEE-eecCCCccchhHHHHHHHhhcCCCc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDV--QR-LSIARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~--~~-~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      ++.++||.| +|++|...++.+...|+ .++.++++.  ++ .+..++++...+ .++ .+..+.......+.+. ..++
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv-~~~~~~~~~~~~~~~~-~g~i  285 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDI-TAPDAPARIAEHLAER-HGGL  285 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeC-CCHHHHHHHHHHHHHh-CCCC
Confidence            578999998 59999999999888999 567776633  22 334445554332 232 2222333333333221 2479


Q ss_pred             cEEEEccCCh----------HHHHHHHH-----------------hhcCCCEEEEEcc
Q 018075          253 DVSFDCVGFD----------KTMSTALN-----------------ATRPGGKVCLIGL  283 (361)
Q Consensus       253 d~vld~~g~~----------~~~~~~~~-----------------~l~~~G~~v~~g~  283 (361)
                      |++|++.|..          +.++..++                 .++++|+++.++.
T Consensus       286 d~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS  343 (450)
T PRK08261        286 DIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSS  343 (450)
T ss_pred             CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECC
Confidence            9999998832          23333333                 4567799998874

>PRK08317 hypothetical protein; Provisional

Probab=96.81  E-value=0.017  Score=50.03  Aligned_cols=104  Identities=21%  Similarity=0.301  Sum_probs=69.7

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHHHcC---CCEEeecCCCccchhHHHHHHHh
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARNLG---ADETAKVSTDIEDVDTDVGKIQN  246 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~lg---~~~~~~~~~~~~~~~~~~~~~~~  246 (361)
                      ++...++++++||.+|+|. |..+..+++..+ ...+++++.+++..+.+++..   ...+.....+.....     +  
T Consensus        12 ~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-----~--   83 (241)
T PRK08317         12 FELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADGLP-----F--   83 (241)
T ss_pred             HHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecccccCC-----C--
Confidence            4557789999999999977 888889998873 347999999998888777651   111111111111110     1  


Q ss_pred             hcCCCccEEEEcc------CChHHHHHHHHhhcCCCEEEEEcc
Q 018075          247 AMGSGIDVSFDCV------GFDKTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       247 ~~~~~~d~vld~~------g~~~~~~~~~~~l~~~G~~v~~g~  283 (361)
                       ....+|+|+...      .....+..+.+.|+|+|.++....
T Consensus        84 -~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  125 (241)
T PRK08317         84 -PDGSFDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLDT  125 (241)
T ss_pred             -CCCCceEEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEec
Confidence             135789887632      222478889999999999988753

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=96.80  E-value=0.0043  Score=50.97  Aligned_cols=100  Identities=19%  Similarity=0.304  Sum_probs=66.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeec-CCC--------------ccchhHHHH
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKV-STD--------------IEDVDTDVG  242 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~-~~~--------------~~~~~~~~~  242 (361)
                      +..+|+|.|+|.+|..|+.+++.+|+ .++..+...++.+..+..+...+... ...              .........
T Consensus        19 ~p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~   97 (168)
T PF01262_consen   19 PPAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFA   97 (168)
T ss_dssp             -T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHH
T ss_pred             CCeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHH
Confidence            34789999999999999999999999 68999999988888888877554331 110              112222222


Q ss_pred             HHHhhcCCCccEEEEccCCh------HHHHHHHHhhcCCCEEEEEc
Q 018075          243 KIQNAMGSGIDVSFDCVGFD------KTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       243 ~~~~~~~~~~d~vld~~g~~------~~~~~~~~~l~~~G~~v~~g  282 (361)
                      +..    ..+|++|.+.--+      -..++.++.|+++..++.+.
T Consensus        98 ~~i----~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis  139 (168)
T PF01262_consen   98 EFI----APADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDIS  139 (168)
T ss_dssp             HHH----HH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETT
T ss_pred             HHH----hhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEE
Confidence            221    3589998633111      13566788899999888876

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=96.71  E-value=0.0086  Score=52.85  Aligned_cols=98  Identities=17%  Similarity=0.318  Sum_probs=71.4

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      +..+|.|+|.|.+|.-++.+|.-+|+ .|...+.+.+|.+.++.+-...+..+.++...+.+.+        .+.|++|.
T Consensus       167 ~~~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v--------~~aDlvIg  237 (371)
T COG0686         167 LPAKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAV--------KKADLVIG  237 (371)
T ss_pred             CCccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHh--------hhccEEEE
Confidence            34567788999999999999999999 5889999999998887744333332223222332222        47899998


Q ss_pred             ccCCh------HHHHHHHHhhcCCCEEEEEccC
Q 018075          258 CVGFD------KTMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       258 ~~g~~------~~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      ++-.+      ...++.++.|.||+.++.+...
T Consensus       238 aVLIpgakaPkLvt~e~vk~MkpGsVivDVAiD  270 (371)
T COG0686         238 AVLIPGAKAPKLVTREMVKQMKPGSVIVDVAID  270 (371)
T ss_pred             EEEecCCCCceehhHHHHHhcCCCcEEEEEEEc
Confidence            66322      3678889999999999988643

>PLN03075 nicotianamine synthase; Provisional

Probab=96.69  E-value=0.011  Score=52.64  Aligned_cols=99  Identities=24%  Similarity=0.277  Sum_probs=66.8

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEeCChhHHHHHHHcC-C----CEEeecCCCccchhHHHHHHHhhcCC
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARNLG-A----DETAKVSTDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg-~----~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (361)
                      .++++|+-+|+|+.++.++.+++.. ...+++.+|.+++..+.+++.- .    ..-+.+..  .+..+    .. ....
T Consensus       122 ~~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~--~Da~~----~~-~~l~  194 (296)
T PLN03075        122 GVPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHT--ADVMD----VT-ESLK  194 (296)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEE--Cchhh----cc-cccC
Confidence            4789999999999999888888655 3337999999999888887643 1    11111111  12111    10 0125


Q ss_pred             CccEEEEcc-------CChHHHHHHHHhhcCCCEEEEEc
Q 018075          251 GIDVSFDCV-------GFDKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       251 ~~d~vld~~-------g~~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      +||+||-.+       .-...++.+.+.|+|||.++.=.
T Consensus       195 ~FDlVF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~  233 (296)
T PLN03075        195 EYDVVFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS  233 (296)
T ss_pred             CcCEEEEecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence            799998864       22247888999999999988654

>PLN02233 ubiquinone biosynthesis methyltransferase

Probab=96.69  E-value=0.027  Score=49.87  Aligned_cols=105  Identities=17%  Similarity=0.243  Sum_probs=68.3

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEeCChhHHHHHHHcC-------CCEEeecCCCccchhHHHHH
Q 018075          172 RRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARNLG-------ADETAKVSTDIEDVDTDVGK  243 (361)
Q Consensus       172 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~lg-------~~~~~~~~~~~~~~~~~~~~  243 (361)
                      +...++++++||-+|||. |..+..+++..+. ..|+++|.+++-.+.+++..       ...+.....+..+       
T Consensus        67 ~~~~~~~~~~VLDlGcGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~~~-------  138 (261)
T PLN02233         67 SWSGAKMGDRVLDLCCGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDATD-------  138 (261)
T ss_pred             HHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEccccc-------
Confidence            345678999999999876 6677788887652 27999999999887775421       1111111111111       


Q ss_pred             HHhhcCCCccEEEEccC------ChHHHHHHHHhhcCCCEEEEEccCC
Q 018075          244 IQNAMGSGIDVSFDCVG------FDKTMSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       244 ~~~~~~~~~d~vld~~g------~~~~~~~~~~~l~~~G~~v~~g~~~  285 (361)
                      +. .....||.|+-+.+      -...++++.+.|+|||+++.+....
T Consensus       139 lp-~~~~sfD~V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~~~  185 (261)
T PLN02233        139 LP-FDDCYFDAITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDFNK  185 (261)
T ss_pred             CC-CCCCCEeEEEEecccccCCCHHHHHHHHHHHcCcCcEEEEEECCC
Confidence            10 11356999976432      1246889999999999999886554

>PRK01581 speE spermidine synthase; Validated

Probab=96.67  E-value=0.041  Score=50.44  Aligned_cols=98  Identities=16%  Similarity=0.117  Sum_probs=65.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcC-----------CCEEeecCCCccchhHHHHHHH
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG-----------ADETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg-----------~~~~~~~~~~~~~~~~~~~~~~  245 (361)
                      ....+|||+|+|. |.++..+++..+...|++++.+++-.+.++++.           ...+-..   ..|..+.++.  
T Consensus       149 ~~PkrVLIIGgGd-G~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vv---i~Da~~fL~~--  222 (374)
T PRK01581        149 IDPKRVLILGGGD-GLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVH---VCDAKEFLSS--  222 (374)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEE---ECcHHHHHHh--
Confidence            4457999999764 667778888766678999999999999988631           1111111   1233333332  


Q ss_pred             hhcCCCccEEEEccCCh-----------HHHHHHHHhhcCCCEEEEEc
Q 018075          246 NAMGSGIDVSFDCVGFD-----------KTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       246 ~~~~~~~d~vld~~g~~-----------~~~~~~~~~l~~~G~~v~~g  282 (361)
                        ....||+||--...+           +.++.+.+.|+|+|.++.-.
T Consensus       223 --~~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs  268 (374)
T PRK01581        223 --PSSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQS  268 (374)
T ss_pred             --cCCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEec
Confidence              246799998754322           35678889999999987753

>PRK04457 spermidine synthase; Provisional

Probab=96.67  E-value=0.028  Score=49.69  Aligned_cols=97  Identities=14%  Similarity=0.138  Sum_probs=67.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc-CCC----EEeecCCCccchhHHHHHHHhhcCCC
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL-GAD----ETAKVSTDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l-g~~----~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (361)
                      .++.+||++|+|+ |..+..+++......+++++.+++-.+.+++. +..    .+...   ..|..+.+.+.    ...
T Consensus        65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~---~~Da~~~l~~~----~~~  136 (262)
T PRK04457         65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVI---EADGAEYIAVH----RHS  136 (262)
T ss_pred             CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEE---ECCHHHHHHhC----CCC
Confidence            4567899999876 88888888887655799999999999988874 321    11111   13444444322    457


Q ss_pred             ccEEEE-ccC---------ChHHHHHHHHhhcCCCEEEEE
Q 018075          252 IDVSFD-CVG---------FDKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       252 ~d~vld-~~g---------~~~~~~~~~~~l~~~G~~v~~  281 (361)
                      +|+|+- ...         ..+.++.+.+.|+|+|.++.-
T Consensus       137 yD~I~~D~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvin  176 (262)
T PRK04457        137 TDVILVDGFDGEGIIDALCTQPFFDDCRNALSSDGIFVVN  176 (262)
T ss_pred             CCEEEEeCCCCCCCccccCcHHHHHHHHHhcCCCcEEEEE
Confidence            999973 211         135788899999999999873

>PRK04266 fibrillarin; Provisional

Probab=96.67  E-value=0.044  Score=47.28  Aligned_cols=104  Identities=11%  Similarity=0.168  Sum_probs=63.7

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCC--CEEeecCCCccchhHHHHHHHhhcC
Q 018075          172 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA--DETAKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       172 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~--~~~~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      +...+++|++||=.|+|+ |..+..+++..+...|++++.+++..+.+.+...  ..+.....+..+.. ....+    .
T Consensus        66 ~~l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~~~~~-~~~~l----~  139 (226)
T PRK04266         66 KNFPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADARKPE-RYAHV----V  139 (226)
T ss_pred             hhCCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCCCCcc-hhhhc----c
Confidence            457899999999999765 5566677777653379999999976654332211  11111111111110 00011    2


Q ss_pred             CCccEEEEccCChH----HHHHHHHhhcCCCEEEEE
Q 018075          250 SGIDVSFDCVGFDK----TMSTALNATRPGGKVCLI  281 (361)
Q Consensus       250 ~~~d~vld~~g~~~----~~~~~~~~l~~~G~~v~~  281 (361)
                      ..+|+++.....+.    .++.+.+.|+|||+++..
T Consensus       140 ~~~D~i~~d~~~p~~~~~~L~~~~r~LKpGG~lvI~  175 (226)
T PRK04266        140 EKVDVIYQDVAQPNQAEIAIDNAEFFLKDGGYLLLA  175 (226)
T ss_pred             ccCCEEEECCCChhHHHHHHHHHHHhcCCCcEEEEE
Confidence            45999996554331    367888899999999984

>PRK14103 trans-aconitate 2-methyltransferase; Provisional

Probab=96.65  E-value=0.033  Score=49.13  Aligned_cols=98  Identities=23%  Similarity=0.301  Sum_probs=69.8

Q ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhc
Q 018075          170 ACRRANVGPETNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       170 ~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      .+......++++||-+|||. |..+..+++.. +. .|++++.++.-.+.+++.+.+...      .+..    ++.  .
T Consensus        21 ll~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~~~~------~d~~----~~~--~   86 (255)
T PRK14103         21 LLARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVDART------GDVR----DWK--P   86 (255)
T ss_pred             HHHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCcEEE------cChh----hCC--C
Confidence            34556678899999999877 77888888876 45 799999999988888876644321      1221    111  1


Q ss_pred             CCCccEEEEccC-----C-hHHHHHHHHhhcCCCEEEEE
Q 018075          249 GSGIDVSFDCVG-----F-DKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       249 ~~~~d~vld~~g-----~-~~~~~~~~~~l~~~G~~v~~  281 (361)
                      ...||+|+....     . ...+..+.+.|+|||+++..
T Consensus        87 ~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~  125 (255)
T PRK14103         87 KPDTDVVVSNAALQWVPEHADLLVRWVDELAPGSWIAVQ  125 (255)
T ss_pred             CCCceEEEEehhhhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence            357999988442     1 34677889999999999875

>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]

Probab=96.65  E-value=0.015  Score=51.24  Aligned_cols=132  Identities=16%  Similarity=0.239  Sum_probs=88.3

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCC---------ccchhHHHHHHHh
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTD---------IEDVDTDVGKIQN  246 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~---------~~~~~~~~~~~~~  246 (361)
                      --++.++|+.|.|..|+.++..++..|+ .|..-+....+.+..+.+|+...-.-++.         ++++...-.++-.
T Consensus       161 tv~pA~vlv~G~Gvagl~aiata~~lG~-iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~~a  239 (356)
T COG3288         161 TVSPAKVLVIGAGVAGLAAIATAVRLGA-IVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAELVA  239 (356)
T ss_pred             cccchhhhhhhHHHHHHHHHHHHhhcce-EEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHHHHH
Confidence            3467888999999999999999999999 67777777777777777776543221110         1122222222222


Q ss_pred             hcCCCccEEEEccCCh------HHHHHHHHhhcCCCEEEEEccCCC-Cc--ceechHhhhcCcEEEEeecC
Q 018075          247 AMGSGIDVSFDCVGFD------KTMSTALNATRPGGKVCLIGLAKT-EM--TVALTPAAAREVDVIGIFRY  308 (361)
Q Consensus       247 ~~~~~~d~vld~~g~~------~~~~~~~~~l~~~G~~v~~g~~~~-~~--~~~~~~~~~~~~~i~~~~~~  308 (361)
                      ..-.++|+||.+.--|      ......+.+|+||..+|.+....+ ..  .-+-.-...++++|.|..+.
T Consensus       240 ~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~nl  310 (356)
T COG3288         240 EQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYTNL  310 (356)
T ss_pred             HHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCcccccCCeEEEeCCeEEEeecCc
Confidence            2346899999976433      257789999999999998864332 21  12224466788999998764

>PRK08017 oxidoreductase; Provisional

Probab=96.64  E-value=0.018  Score=50.46  Aligned_cols=80  Identities=21%  Similarity=0.317  Sum_probs=53.6

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEe-ecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          180 TNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETA-KVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       180 ~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      +++||.|+ |.+|.++++.+...|+ .|++++++.++.+.+++.++..+. ++ .+..+..+.+..+....+.++|.++.
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~i~~~~~~~~~~ii~   80 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDL-DDPESVERAADEVIALTDNRLYGLFN   80 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeec-CCHHHHHHHHHHHHHhcCCCCeEEEE
Confidence            47999995 9999999999988999 678888888888777777754432 22 12222233333333222357899888


Q ss_pred             ccCC
Q 018075          258 CVGF  261 (361)
Q Consensus       258 ~~g~  261 (361)
                      +.|.
T Consensus        81 ~ag~   84 (256)
T PRK08017         81 NAGF   84 (256)
T ss_pred             CCCC
Confidence            8763

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=96.60  E-value=0.013  Score=49.58  Aligned_cols=98  Identities=16%  Similarity=0.236  Sum_probs=62.9

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc----CCCEEeecCCCccchhHHHHHHHhhc
Q 018075          173 RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       173 ~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      ..+..++.+||-+|||. |..+..+++. |. .|+++|.+++..+.+++.    +...+....   .++..    ..  .
T Consensus        25 ~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v~~~~---~d~~~----~~--~   92 (197)
T PRK11207         25 AVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNLHTAV---VDLNN----LT--F   92 (197)
T ss_pred             hcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcceEEe---cChhh----CC--c
Confidence            34566788999999887 7788888875 77 799999999876665542    322111100   12111    11  1


Q ss_pred             CCCccEEEEccC----C----hHHHHHHHHhhcCCCEEEEEc
Q 018075          249 GSGIDVSFDCVG----F----DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       249 ~~~~d~vld~~g----~----~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ...||+|+.+..    .    ...++.+.+.|+|||+++.+.
T Consensus        93 ~~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~  134 (197)
T PRK11207         93 DGEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA  134 (197)
T ss_pred             CCCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence            346999987533    1    235777888999999976543

>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []

Probab=96.60  E-value=0.0077  Score=52.21  Aligned_cols=107  Identities=22%  Similarity=0.389  Sum_probs=64.1

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHh
Q 018075          172 RRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQN  246 (361)
Q Consensus       172 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~  246 (361)
                      +....++|++||=+|||. |..+..+++..+. ..|+++|.+++-++.+++    .+...+.-...+.++..     +  
T Consensus        41 ~~~~~~~g~~vLDv~~Gt-G~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da~~lp-----~--  112 (233)
T PF01209_consen   41 KLLGLRPGDRVLDVACGT-GDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDAEDLP-----F--  112 (233)
T ss_dssp             HHHT--S--EEEEET-TT-SHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BTTB-------S--
T ss_pred             hccCCCCCCEEEEeCCCh-HHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCHHHhc-----C--
Confidence            445778999999998776 7788888888763 379999999987766654    23222211112112211     1  


Q ss_pred             hcCCCccEEEEccCCh------HHHHHHHHhhcCCCEEEEEccCCCC
Q 018075          247 AMGSGIDVSFDCVGFD------KTMSTALNATRPGGKVCLIGLAKTE  287 (361)
Q Consensus       247 ~~~~~~d~vld~~g~~------~~~~~~~~~l~~~G~~v~~g~~~~~  287 (361)
                       ....||.|..+.|-.      ..++++.+.|+|||+++.+....+.
T Consensus       113 -~d~sfD~v~~~fglrn~~d~~~~l~E~~RVLkPGG~l~ile~~~p~  158 (233)
T PF01209_consen  113 -PDNSFDAVTCSFGLRNFPDRERALREMYRVLKPGGRLVILEFSKPR  158 (233)
T ss_dssp             --TT-EEEEEEES-GGG-SSHHHHHHHHHHHEEEEEEEEEEEEEB-S
T ss_pred             -CCCceeEEEHHhhHHhhCCHHHHHHHHHHHcCCCeEEEEeeccCCC
Confidence             146799998766543      4788899999999999998865543

Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.

>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated

Probab=96.59  E-value=0.049  Score=45.51  Aligned_cols=100  Identities=16%  Similarity=0.312  Sum_probs=65.4

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHh
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQN  246 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~  246 (361)
                      +....+.++++||=+|+|. |..++.+++......+++++.+++..+.+++    ++...+.....   +...   .   
T Consensus        24 ~~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~---d~~~---~---   93 (187)
T PRK08287         24 LSKLELHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPG---EAPI---E---   93 (187)
T ss_pred             HHhcCCCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEec---Cchh---h---
Confidence            3445677899999999876 7777777777643479999999987766654    34332221111   1111   1   


Q ss_pred             hcCCCccEEEEccC---ChHHHHHHHHhhcCCCEEEEE
Q 018075          247 AMGSGIDVSFDCVG---FDKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       247 ~~~~~~d~vld~~g---~~~~~~~~~~~l~~~G~~v~~  281 (361)
                       ....+|+|+....   -...++.+.+.|+++|+++..
T Consensus        94 -~~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~lv~~  130 (187)
T PRK08287         94 -LPGKADAIFIGGSGGNLTAIIDWSLAHLHPGGRLVLT  130 (187)
T ss_pred             -cCcCCCEEEECCCccCHHHHHHHHHHhcCCCeEEEEE
Confidence             1357999986432   123667788999999999764

>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase

Probab=96.58  E-value=0.038  Score=47.82  Aligned_cols=105  Identities=21%  Similarity=0.279  Sum_probs=67.3

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEeCChhHHHHHHHc----CCCEEeecCCCccchhHHHHHHH
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~  245 (361)
                      +....++++++||-+|||. |..+..+++..+. ..+++++.+++..+.+++.    +.+.+.....   +...    +.
T Consensus        38 l~~l~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~---d~~~----~~  109 (231)
T TIGR02752        38 MKRMNVQAGTSALDVCCGT-ADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHG---NAME----LP  109 (231)
T ss_pred             HHhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEe---chhc----CC
Confidence            3456788999999999876 7777888887642 2799999998877666542    3222211111   1110    10


Q ss_pred             hhcCCCccEEEEccC------ChHHHHHHHHhhcCCCEEEEEccC
Q 018075          246 NAMGSGIDVSFDCVG------FDKTMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       246 ~~~~~~~d~vld~~g------~~~~~~~~~~~l~~~G~~v~~g~~  284 (361)
                       .....+|+|+-+..      ....++.+.+.|+|||+++.....
T Consensus       110 -~~~~~fD~V~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~  153 (231)
T TIGR02752       110 -FDDNSFDYVTIGFGLRNVPDYMQVLREMYRVVKPGGKVVCLETS  153 (231)
T ss_pred             -CCCCCccEEEEecccccCCCHHHHHHHHHHHcCcCeEEEEEECC
Confidence             11357999975422      123577789999999999887543

MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.

>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase

Probab=96.57  E-value=0.085  Score=46.77  Aligned_cols=99  Identities=19%  Similarity=0.262  Sum_probs=62.9

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHH----HcCCCEEeecCCCccchhHHHHHHHhhc
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIAR----NLGADETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      .++++|++||=+|+|+ |..++.+++.++ ...|++++.++++.+.++    ..|...+.....   +...    +.. .
T Consensus        67 l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~~---D~~~----~~~-~  137 (264)
T TIGR00446        67 LEPDPPERVLDMAAAP-GGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGVLNVAVTNF---DGRV----FGA-A  137 (264)
T ss_pred             hCCCCcCEEEEECCCc-hHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEecC---CHHH----hhh-h
Confidence            4678999999898766 555666666653 236999999999876554    456554333222   2111    111 1


Q ss_pred             CCCccEEEE---ccCCh-------------------------HHHHHHHHhhcCCCEEEEE
Q 018075          249 GSGIDVSFD---CVGFD-------------------------KTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       249 ~~~~d~vld---~~g~~-------------------------~~~~~~~~~l~~~G~~v~~  281 (361)
                      ...||.||-   |+|..                         ..+..+++.|++||+++..
T Consensus       138 ~~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpgG~lvYs  198 (264)
T TIGR00446       138 VPKFDAILLDAPCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPGGVLVYS  198 (264)
T ss_pred             ccCCCEEEEcCCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence            235999974   44431                         2666788899999998744

>PRK06182 short chain dehydrogenase; Validated

Probab=96.56  E-value=0.024  Score=50.41  Aligned_cols=81  Identities=23%  Similarity=0.288  Sum_probs=54.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEE-eecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      ++.+++|.| +|++|...++.+...|+ .|+.++++.++.+.+.+.+...+ .++ .+.+++...+.++... ..++|++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv-~~~~~~~~~~~~~~~~-~~~id~l   78 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDV-TDEASIKAAVDTIIAE-EGRIDVL   78 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeC-CCHHHHHHHHHHHHHh-cCCCCEE
Confidence            467899998 59999999998888999 67888888877665554454332 232 2333444444444332 3579999


Q ss_pred             EEccCC
Q 018075          256 FDCVGF  261 (361)
Q Consensus       256 ld~~g~  261 (361)
                      +++.|.
T Consensus        79 i~~ag~   84 (273)
T PRK06182         79 VNNAGY   84 (273)
T ss_pred             EECCCc
Confidence            999874

>PRK00811 spermidine synthase; Provisional

Probab=96.53  E-value=0.019  Score=51.44  Aligned_cols=97  Identities=19%  Similarity=0.170  Sum_probs=65.4

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcC------C--C-EEeecCCCccchhHHHHHHHhh
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG------A--D-ETAKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg------~--~-~~~~~~~~~~~~~~~~~~~~~~  247 (361)
                      ...++||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-      .  + .+-..   ..|..+.++.    
T Consensus        75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~---~~Da~~~l~~----  146 (283)
T PRK00811         75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELV---IGDGIKFVAE----  146 (283)
T ss_pred             CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEE---ECchHHHHhh----
Confidence            4568999999876 777778888767778999999999888887731      1  1 11111   1233333322    


Q ss_pred             cCCCccEEEEccCC----------hHHHHHHHHhhcCCCEEEEE
Q 018075          248 MGSGIDVSFDCVGF----------DKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       248 ~~~~~d~vld~~g~----------~~~~~~~~~~l~~~G~~v~~  281 (361)
                      ....+|+|+.....          .+.++.+.+.|+++|.++.-
T Consensus       147 ~~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~  190 (283)
T PRK00811        147 TENSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQ  190 (283)
T ss_pred             CCCcccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEe
Confidence            24679999874321          23467788999999998864

>TIGR00138 gidB 16S rRNA methyltransferase GidB

Probab=96.51  E-value=0.023  Score=47.21  Aligned_cols=94  Identities=19%  Similarity=0.265  Sum_probs=60.4

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHH----HcCCCEEeecCCCccchhHHHHHHHhhcCCCcc
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGADETAKVSTDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      ++++||-+|||. |..++.+++......|++++.+++..+.++    +.+.+.+.....   +..+    +.  ....+|
T Consensus        42 ~~~~vLDiGcGt-G~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i~~i~~---d~~~----~~--~~~~fD  111 (181)
T TIGR00138        42 DGKKVIDIGSGA-GFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNVEIVNG---RAED----FQ--HEEQFD  111 (181)
T ss_pred             CCCeEEEecCCC-CccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCeEEEec---chhh----cc--ccCCcc
Confidence            488999999876 677777776654447999999987665543    455443222111   2211    11  135799


Q ss_pred             EEEEccC--ChHHHHHHHHhhcCCCEEEEE
Q 018075          254 VSFDCVG--FDKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       254 ~vld~~g--~~~~~~~~~~~l~~~G~~v~~  281 (361)
                      +|+...-  -+..++.+.+.|++||+++..
T Consensus       112 ~I~s~~~~~~~~~~~~~~~~LkpgG~lvi~  141 (181)
T TIGR00138       112 VITSRALASLNVLLELTLNLLKVGGYFLAY  141 (181)
T ss_pred             EEEehhhhCHHHHHHHHHHhcCCCCEEEEE
Confidence            9987531  123566778889999999876

GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.

>PRK12828 short chain dehydrogenase; Provisional

Probab=96.51  E-value=0.074  Score=45.89  Aligned_cols=81  Identities=19%  Similarity=0.165  Sum_probs=49.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHH-HHHHH---cCCCEE-eecCCCccchhHHHHHHHhhcCCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRL-SIARN---LGADET-AKVSTDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~-~~~~~---lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  251 (361)
                      ++.++||.| +|.+|..+++.+...|+ .|+.++++.++. +.+++   .+...+ .+. .+..+..+...++... -.+
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~~~   82 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDL-VDPQAARRAVDEVNRQ-FGR   82 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeec-CCHHHHHHHHHHHHHH-hCC
Confidence            478999998 59999999998888899 578887766542 22222   233221 122 1223333334433322 247


Q ss_pred             ccEEEEccCC
Q 018075          252 IDVSFDCVGF  261 (361)
Q Consensus       252 ~d~vld~~g~  261 (361)
                      +|+++.+.+.
T Consensus        83 ~d~vi~~ag~   92 (239)
T PRK12828         83 LDALVNIAGA   92 (239)
T ss_pred             cCEEEECCcc
Confidence            9999998763

>PRK08618 ornithine cyclodeaminase; Validated

Probab=96.48  E-value=0.063  Score=49.15  Aligned_cols=99  Identities=11%  Similarity=0.134  Sum_probs=66.4

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHH-HHHHcCCCEEEEEeCChhHHH-HHHHc----CCCEEeecCCCccchhHHHHHHH
Q 018075          172 RRANVGPETNVMIMGSGPIGLVTLL-AARAFGAPRIIITDVDVQRLS-IARNL----GADETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       172 ~~~~~~~g~~vlI~G~g~~G~~ai~-la~~~g~~~vv~v~~~~~~~~-~~~~l----g~~~~~~~~~~~~~~~~~~~~~~  245 (361)
                      +...-+...+++|+|+|..|.+.+. ++...+.+.|...++++++.+ +++++    +... ..+    .+..+.+    
T Consensus       120 ~~la~~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~-~~~----~~~~~~~----  190 (325)
T PRK08618        120 KYLAREDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEI-YVV----NSADEAI----  190 (325)
T ss_pred             HHhcCCCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcE-EEe----CCHHHHH----
Confidence            4433345678999999999987665 445678888999999888765 33433    3321 111    1222222    


Q ss_pred             hhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCC
Q 018075          246 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       246 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~  285 (361)
                          ...|+|+.|.++. +..-. ..+++|-+++.+|...
T Consensus       191 ----~~aDiVi~aT~s~-~p~i~-~~l~~G~hV~~iGs~~  224 (325)
T PRK08618        191 ----EEADIIVTVTNAK-TPVFS-EKLKKGVHINAVGSFM  224 (325)
T ss_pred             ----hcCCEEEEccCCC-CcchH-HhcCCCcEEEecCCCC
Confidence                4699999998876 43334 8999999999998654

>PRK05693 short chain dehydrogenase; Provisional

Probab=96.48  E-value=0.027  Score=50.07  Aligned_cols=79  Identities=22%  Similarity=0.257  Sum_probs=53.4

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEE-eecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          180 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       180 ~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      .++||.| +|++|...++.+...|+ .|+.++++.++.+.+...+...+ .++ .+.++..+.+..+.+ ...++|++++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~-~~~~id~vi~   78 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDV-NDGAALARLAEELEA-EHGGLDVLIN   78 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeC-CCHHHHHHHHHHHHH-hcCCCCEEEE
Confidence            4689998 59999999998888999 67888888777766655554432 233 222344444444432 2357999999


Q ss_pred             ccCC
Q 018075          258 CVGF  261 (361)
Q Consensus       258 ~~g~  261 (361)
                      +.|.
T Consensus        79 ~ag~   82 (274)
T PRK05693         79 NAGY   82 (274)
T ss_pred             CCCC
Confidence            9873

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.46  E-value=0.032  Score=52.64  Aligned_cols=75  Identities=15%  Similarity=0.267  Sum_probs=53.6

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHH-HHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccE
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRL-SIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV  254 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~-~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  254 (361)
                      --.+.++||+|+|.+|.+++..+...|+..++.+.++.++. .++++++....+.       +.+ +.+.    -..+|+
T Consensus       178 ~l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~-------~~~-l~~~----l~~aDi  245 (414)
T PRK13940        178 NISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHY-------LSE-LPQL----IKKADI  245 (414)
T ss_pred             CccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEec-------HHH-HHHH----hccCCE
Confidence            35688999999999999999999999987888888887764 4555565222222       111 1111    146999


Q ss_pred             EEEccCCh
Q 018075          255 SFDCVGFD  262 (361)
Q Consensus       255 vld~~g~~  262 (361)
                      ||+|++.+
T Consensus       246 VI~aT~a~  253 (414)
T PRK13940        246 IIAAVNVL  253 (414)
T ss_pred             EEECcCCC
Confidence            99999987

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=96.45  E-value=0.059  Score=46.05  Aligned_cols=101  Identities=18%  Similarity=0.193  Sum_probs=63.4

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcCCCEEe------------ecCCCccchhHHHH
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADETA------------KVSTDIEDVDTDVG  242 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~------------~~~~~~~~~~~~~~  242 (361)
                      +.++.+||+.|||. |.-++-+|. .|. .|++++.++...+.+ ++.+.....            .+.-...|+.+   
T Consensus        32 ~~~~~rvLd~GCG~-G~da~~LA~-~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~---  105 (213)
T TIGR03840        32 LPAGARVFVPLCGK-SLDLAWLAE-QGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFA---  105 (213)
T ss_pred             CCCCCeEEEeCCCc-hhHHHHHHh-CCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCC---
Confidence            46778999999987 888888886 799 699999999887764 333322100            00000011111   


Q ss_pred             HHHhhcCCCccEEEEccCC--------hHHHHHHHHhhcCCCEEEEEcc
Q 018075          243 KIQNAMGSGIDVSFDCVGF--------DKTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       243 ~~~~~~~~~~d~vld~~g~--------~~~~~~~~~~l~~~G~~v~~g~  283 (361)
                       +.......||.|+|+..-        ...++.+.+.|+|||+++.+..
T Consensus       106 -~~~~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~  153 (213)
T TIGR03840       106 -LTAADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL  153 (213)
T ss_pred             -CCcccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence             000012469999996431        1357788999999998776654

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>COG4122 Predicted O-methyltransferase [General function prediction only]

Probab=96.45  E-value=0.07  Score=45.43  Aligned_cols=104  Identities=22%  Similarity=0.313  Sum_probs=71.6

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhhc
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      .+.+...++|=+|++. |+.++.+|..+. -.++++++.++++.+.+++    .|.+..+..... .+..+.+.+   ..
T Consensus        55 ~~~~~~k~iLEiGT~~-GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~-gdal~~l~~---~~  129 (219)
T COG4122          55 ARLSGPKRILEIGTAI-GYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLG-GDALDVLSR---LL  129 (219)
T ss_pred             HHhcCCceEEEeeccc-CHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEec-CcHHHHHHh---cc
Confidence            4556788999998654 788888888886 3379999999998877765    465553222111 244333332   23


Q ss_pred             CCCccEEEEccCC---hHHHHHHHHhhcCCCEEEEEc
Q 018075          249 GSGIDVSFDCVGF---DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       249 ~~~~d~vld~~g~---~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ...||+||--..-   +..++.+++.|+|||-++.=.
T Consensus       130 ~~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~DN  166 (219)
T COG4122         130 DGSFDLVFIDADKADYPEYLERALPLLRPGGLIVADN  166 (219)
T ss_pred             CCCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEee
Confidence            5789999764442   257889999999999888654

>PLN02244 tocopherol O-methyltransferase

Probab=96.44  E-value=0.062  Score=49.56  Aligned_cols=97  Identities=16%  Similarity=0.216  Sum_probs=64.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc----CCC-EEeecCCCccchhHHHHHHHhhcCCC
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GAD-ETAKVSTDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (361)
                      +++++||-+|||. |..+..+++..|+ .|++++.++...+.+++.    +.. .+.....   +...    +. .....
T Consensus       117 ~~~~~VLDiGCG~-G~~~~~La~~~g~-~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~---D~~~----~~-~~~~~  186 (340)
T PLN02244        117 KRPKRIVDVGCGI-GGSSRYLARKYGA-NVKGITLSPVQAARANALAAAQGLSDKVSFQVA---DALN----QP-FEDGQ  186 (340)
T ss_pred             CCCCeEEEecCCC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEc---Cccc----CC-CCCCC
Confidence            7889999999876 6778888888888 799999999866655543    321 1111111   1110    00 01357


Q ss_pred             ccEEEEccCC------hHHHHHHHHhhcCCCEEEEEcc
Q 018075          252 IDVSFDCVGF------DKTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       252 ~d~vld~~g~------~~~~~~~~~~l~~~G~~v~~g~  283 (361)
                      ||+|+.....      ...++++.+.|+|||++++...
T Consensus       187 FD~V~s~~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~~  224 (340)
T PLN02244        187 FDLVWSMESGEHMPDKRKFVQELARVAAPGGRIIIVTW  224 (340)
T ss_pred             ccEEEECCchhccCCHHHHHHHHHHHcCCCcEEEEEEe
Confidence            9999864321      2467889999999999998754

>PLN02781 Probable caffeoyl-CoA O-methyltransferase

Probab=96.43  E-value=0.061  Score=46.73  Aligned_cols=106  Identities=18%  Similarity=0.213  Sum_probs=68.6

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhhc
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      .+..++++||-+|+|. |..++.+++.++ ..++++++.+++..+.+++    .|...-+.+.  ..+..+.+.++....
T Consensus        64 ~~~~~~~~vLEiGt~~-G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~--~gda~~~L~~l~~~~  140 (234)
T PLN02781         64 VKIMNAKNTLEIGVFT-GYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFI--QSDALSALDQLLNND  140 (234)
T ss_pred             HHHhCCCEEEEecCcc-cHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE--EccHHHHHHHHHhCC
Confidence            4567788999999754 666677777653 3489999999988776655    4543222221  134445554443211


Q ss_pred             -CCCccEEEEccCCh---HHHHHHHHhhcCCCEEEEEc
Q 018075          249 -GSGIDVSFDCVGFD---KTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       249 -~~~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~~g  282 (361)
                       ...||+||--...+   ..++.+.+.|++||.++.-.
T Consensus       141 ~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~dn  178 (234)
T PLN02781        141 PKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAFDN  178 (234)
T ss_pred             CCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence             35799998654322   35777889999999887643

>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional

Probab=96.43  E-value=0.042  Score=48.66  Aligned_cols=106  Identities=15%  Similarity=0.208  Sum_probs=69.2

Q ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCC-EEeecCCCccchhHHHHHHHhh
Q 018075          169 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD-ETAKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       169 ~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~  247 (361)
                      ..+...+++++.+||=+|||. |..+..+++..+. .|++++.+++-.+.+++.... .-+....  .+...    . ..
T Consensus        43 ~~l~~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~-~v~giD~s~~~~~~a~~~~~~~~~i~~~~--~D~~~----~-~~  113 (263)
T PTZ00098         43 KILSDIELNENSKVLDIGSGL-GGGCKYINEKYGA-HVHGVDICEKMVNIAKLRNSDKNKIEFEA--NDILK----K-DF  113 (263)
T ss_pred             HHHHhCCCCCCCEEEEEcCCC-ChhhHHHHhhcCC-EEEEEECCHHHHHHHHHHcCcCCceEEEE--CCccc----C-CC
Confidence            345567889999999999875 6567777777777 799999999888777764321 1111100  11110    0 00


Q ss_pred             cCCCccEEEEcc-----C---ChHHHHHHHHhhcCCCEEEEEcc
Q 018075          248 MGSGIDVSFDCV-----G---FDKTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       248 ~~~~~d~vld~~-----g---~~~~~~~~~~~l~~~G~~v~~g~  283 (361)
                      ....||+|+..-     +   -...++.+.+.|+|||+++....
T Consensus       114 ~~~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~  157 (263)
T PTZ00098        114 PENTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY  157 (263)
T ss_pred             CCCCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence            135699998621     1   12467788899999999998764

>TIGR00417 speE spermidine synthase

Probab=96.43  E-value=0.032  Score=49.66  Aligned_cols=98  Identities=14%  Similarity=0.159  Sum_probs=61.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcC-C------CEEeecCCCccchhHHHHHHHhhcC
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG-A------DETAKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg-~------~~~~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      ...++||++|+|. |..+..+++......+..++.+++-.+.+++.- .      +.-+.+.  ..+..+.+++    ..
T Consensus        71 ~~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~--~~D~~~~l~~----~~  143 (270)
T TIGR00417        71 PNPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQ--IDDGFKFLAD----TE  143 (270)
T ss_pred             CCCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEE--ECchHHHHHh----CC
Confidence            3456999999766 555667777665668999999988777776631 1      0000100  1233233322    24


Q ss_pred             CCccEEEEccC----------ChHHHHHHHHhhcCCCEEEEE
Q 018075          250 SGIDVSFDCVG----------FDKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       250 ~~~d~vld~~g----------~~~~~~~~~~~l~~~G~~v~~  281 (361)
                      ..+|+|+-...          ..+.++.+.+.|+++|.++..
T Consensus       144 ~~yDvIi~D~~~~~~~~~~l~~~ef~~~~~~~L~pgG~lv~~  185 (270)
T TIGR00417       144 NTFDVIIVDSTDPVGPAETLFTKEFYELLKKALNEDGIFVAQ  185 (270)
T ss_pred             CCccEEEEeCCCCCCcccchhHHHHHHHHHHHhCCCcEEEEc
Confidence            68999976332          224567888999999999876

the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.43  E-value=0.059  Score=45.69  Aligned_cols=35  Identities=31%  Similarity=0.499  Sum_probs=31.4

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  212 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~  212 (361)
                      .+.+|+|+|+|++|..+++.+...|...+..+|.+
T Consensus        20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence            45899999999999999999999999888888876

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.40  E-value=0.095  Score=46.00  Aligned_cols=81  Identities=19%  Similarity=0.247  Sum_probs=50.4

Q ss_pred             CCCEEEEECC---CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEE----eecCCCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMGS---GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET----AKVSTDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G~---g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~----~~~~~~~~~~~~~~~~~~~~~~~  250 (361)
                      .|.++||.|+   +++|.+.++.+...|+ .|+.+.++++..+.++++....+    .|. .+.++..+.+.++.+. -+
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~v~~~~~~~~~~-~g   82 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDV-ASDESIERAFATIKER-VG   82 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCC-CCHHHHHHHHHHHHHH-hC
Confidence            5788999984   4999999998888999 56777666544444555432211    122 2223444444444332 24


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      .+|+++++.|.
T Consensus        83 ~iD~lv~nAg~   93 (252)
T PRK06079         83 KIDGIVHAIAY   93 (252)
T ss_pred             CCCEEEEcccc
Confidence            69999998873

>PRK07326 short chain dehydrogenase; Provisional

Probab=96.39  E-value=0.084  Score=45.63  Aligned_cols=82  Identities=29%  Similarity=0.286  Sum_probs=50.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCC---CEEeecC-CCccchhHHHHHHHhhcCCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGA---DETAKVS-TDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~  251 (361)
                      .+.++||.| +|.+|..+++.+...|+ .|+++++++++.+ ..+++..   ...+..+ .+..++...+.++.+. ..+
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   82 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAA-FGG   82 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHH-cCC
Confidence            467899998 59999999998877899 5777777776543 3344431   1112111 2223344444444332 247


Q ss_pred             ccEEEEccCC
Q 018075          252 IDVSFDCVGF  261 (361)
Q Consensus       252 ~d~vld~~g~  261 (361)
                      +|++|++.|.
T Consensus        83 ~d~vi~~ag~   92 (237)
T PRK07326         83 LDVLIANAGV   92 (237)
T ss_pred             CCEEEECCCC
Confidence            9999998764

>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=96.39  E-value=0.024  Score=50.03  Aligned_cols=96  Identities=19%  Similarity=0.311  Sum_probs=63.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc----CCC-EEeecCCCccchhHHHHHHHhhcCCC
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GAD-ETAKVSTDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (361)
                      .++.+||-+|||. |..+..+++. |. .|++++.+++..+.+++.    |.. .+....   .+..+    +.......
T Consensus        43 ~~~~~vLDiGcG~-G~~a~~la~~-g~-~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~---~d~~~----l~~~~~~~  112 (255)
T PRK11036         43 PRPLRVLDAGGGE-GQTAIKLAEL-GH-QVILCDLSAEMIQRAKQAAEAKGVSDNMQFIH---CAAQD----IAQHLETP  112 (255)
T ss_pred             CCCCEEEEeCCCc-hHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCccceEEEE---cCHHH----HhhhcCCC
Confidence            5678899999877 7888888875 76 799999999888777653    321 111111   12211    11112467


Q ss_pred             ccEEEEcc-----CC-hHHHHHHHHhhcCCCEEEEEc
Q 018075          252 IDVSFDCV-----GF-DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       252 ~d~vld~~-----g~-~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ||+|+...     .. ...+..+.+.|+|||+++.+-
T Consensus       113 fD~V~~~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~~  149 (255)
T PRK11036        113 VDLILFHAVLEWVADPKSVLQTLWSVLRPGGALSLMF  149 (255)
T ss_pred             CCEEEehhHHHhhCCHHHHHHHHHHHcCCCeEEEEEE
Confidence            99998642     11 246788999999999998753

>PRK08265 short chain dehydrogenase; Provisional

Probab=96.39  E-value=0.089  Score=46.42  Aligned_cols=81  Identities=22%  Similarity=0.304  Sum_probs=52.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCCE-E--eecCCCccchhHHHHHHHhhcCCCc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADE-T--AKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      .+.++||.| +|++|.+.+..+...|+ .|+.++++.++.+ ..++++... .  .++ .+..+..+.+.++.+. -..+
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~-~g~i   81 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDI-TDDAAIERAVATVVAR-FGRV   81 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecC-CCHHHHHHHHHHHHHH-hCCC
Confidence            467899998 59999999998888999 6788888776543 444555321 1  122 2233344444444332 2469


Q ss_pred             cEEEEccCC
Q 018075          253 DVSFDCVGF  261 (361)
Q Consensus       253 d~vld~~g~  261 (361)
                      |+++++.|.
T Consensus        82 d~lv~~ag~   90 (261)
T PRK08265         82 DILVNLACT   90 (261)
T ss_pred             CEEEECCCC
Confidence            999998874

>PLN02366 spermidine synthase

Probab=96.39  E-value=0.051  Score=49.13  Aligned_cols=98  Identities=21%  Similarity=0.237  Sum_probs=65.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc-CC------C-EEeecCCCccchhHHHHHHHhhc
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL-GA------D-ETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l-g~------~-~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      ...++||++|+|. |..+..+++.-+...|..++.+++-.+.++++ ..      + .+-..   ..|....+++.   .
T Consensus        90 ~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi---~~Da~~~l~~~---~  162 (308)
T PLN02366         90 PNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLH---IGDGVEFLKNA---P  162 (308)
T ss_pred             CCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEE---EChHHHHHhhc---c
Confidence            5578999999876 66777888877767899999999888877773 21      1 11111   12333333322   2


Q ss_pred             CCCccEEEEccCC----------hHHHHHHHHhhcCCCEEEEE
Q 018075          249 GSGIDVSFDCVGF----------DKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       249 ~~~~d~vld~~g~----------~~~~~~~~~~l~~~G~~v~~  281 (361)
                      +..+|+||--...          .+.++.+.+.|+|+|.++.-
T Consensus       163 ~~~yDvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q  205 (308)
T PLN02366        163 EGTYDAIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQ  205 (308)
T ss_pred             CCCCCEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEC
Confidence            4579999874432          13578889999999998764

>TIGR00477 tehB tellurite resistance protein TehB

Probab=96.39  E-value=0.025  Score=47.70  Aligned_cols=96  Identities=17%  Similarity=0.261  Sum_probs=59.8

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc----CCCEEeecCCCccchhHHHHHHHhhcC
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      ....++.+||-+|||. |..++.+++ .|. .|+++|.+++..+.+++.    +.. + ..  ...+....  .+    .
T Consensus        26 ~~~~~~~~vLDiGcG~-G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~-v-~~--~~~d~~~~--~~----~   92 (195)
T TIGR00477        26 VKTVAPCKTLDLGCGQ-GRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLP-L-RT--DAYDINAA--AL----N   92 (195)
T ss_pred             hccCCCCcEEEeCCCC-CHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCC-c-ee--Eeccchhc--cc----c
Confidence            3445667999999876 777777776 477 799999999877665442    322 1 10  00111100  01    3


Q ss_pred             CCccEEEEccC-----C---hHHHHHHHHhhcCCCEEEEEc
Q 018075          250 SGIDVSFDCVG-----F---DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       250 ~~~d~vld~~g-----~---~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ..+|+|+.+..     .   ...++.+.+.|+|||.++.+.
T Consensus        93 ~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~~  133 (195)
T TIGR00477        93 EDYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPGGYNLIVA  133 (195)
T ss_pred             CCCCEEEEecccccCCHHHHHHHHHHHHHHhCCCcEEEEEE
Confidence            46999976421     1   246778888999999966554

Part of a tellurite-reducing operon tehA and tehB

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.38  E-value=0.023  Score=55.16  Aligned_cols=74  Identities=26%  Similarity=0.379  Sum_probs=54.0

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccE
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV  254 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  254 (361)
                      .+.+|++|+|+|.|..|++++.+++..|+ .|++.|.++++.+.++++|+.....  .   ...+   .+     ..+|+
T Consensus         8 ~~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~~~~~--~---~~~~---~l-----~~~D~   73 (488)
T PRK03369          8 PLLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVATVST--S---DAVQ---QI-----ADYAL   73 (488)
T ss_pred             cccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCEEEcC--c---chHh---Hh-----hcCCE
Confidence            35688999999999999999999999999 6788887766666667777643211  1   1111   11     35799


Q ss_pred             EEEccCCh
Q 018075          255 SFDCVGFD  262 (361)
Q Consensus       255 vld~~g~~  262 (361)
                      |+.+.|.+
T Consensus        74 VV~SpGi~   81 (488)
T PRK03369         74 VVTSPGFR   81 (488)
T ss_pred             EEECCCCC
Confidence            99998876

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.36  E-value=0.12  Score=46.06  Aligned_cols=82  Identities=23%  Similarity=0.272  Sum_probs=49.6

Q ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHcCCCEEEEEeCChhHH----HHHHHcCCCEEeecC-CCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMGS-G--PIGLVTLLAARAFGAPRIIITDVDVQRL----SIARNLGADETAKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G~-g--~~G~~ai~la~~~g~~~vv~v~~~~~~~----~~~~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      ++.++||.|+ +  ++|.+.++.+...|+ .|+.+.++++..    ++.+++|....+..+ .+..+....+.++.+. -
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~-~   83 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKK-W   83 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHH-h
Confidence            4678999995 4  899999998888999 566666654322    222334533222211 2233444444444332 2


Q ss_pred             CCccEEEEccCC
Q 018075          250 SGIDVSFDCVGF  261 (361)
Q Consensus       250 ~~~d~vld~~g~  261 (361)
                      +.+|+++++.|.
T Consensus        84 g~iD~lVnnAG~   95 (271)
T PRK06505         84 GKLDFVVHAIGF   95 (271)
T ss_pred             CCCCEEEECCcc
Confidence            479999998873

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=96.36  E-value=0.038  Score=44.47  Aligned_cols=103  Identities=18%  Similarity=0.271  Sum_probs=63.6

Q ss_pred             HHHhcCC-CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCCEE-eecCCCccchhHHHHHHHh
Q 018075          170 ACRRANV-GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADET-AKVSTDIEDVDTDVGKIQN  246 (361)
Q Consensus       170 ~l~~~~~-~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~  246 (361)
                      +++...+ .++.+++|+|+|.+|...++.+...|...+...+++.++.+ ++++++.... ...    .+..+.      
T Consensus         9 a~~~~~~~~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~----~~~~~~------   78 (155)
T cd01065           9 ALEEAGIELKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAY----LDLEEL------   78 (155)
T ss_pred             HHHhhCCCCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceee----cchhhc------
Confidence            4444443 55789999999999999999888887546888888877654 4555664310 011    111111      


Q ss_pred             hcCCCccEEEEccCChHH----HHHHHHhhcCCCEEEEEccC
Q 018075          247 AMGSGIDVSFDCVGFDKT----MSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       247 ~~~~~~d~vld~~g~~~~----~~~~~~~l~~~G~~v~~g~~  284 (361)
                        -.++|+|+.+++....    .......++++..++.++..
T Consensus        79 --~~~~Dvvi~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~~  118 (155)
T cd01065          79 --LAEADLIINTTPVGMKPGDELPLPPSLLKPGGVVYDVVYN  118 (155)
T ss_pred             --cccCCEEEeCcCCCCCCCCCCCCCHHHcCCCCEEEEcCcC
Confidence              2579999999886532    11112345666666666544

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK01683 trans-aconitate 2-methyltransferase; Provisional

Probab=96.35  E-value=0.084  Score=46.54  Aligned_cols=100  Identities=23%  Similarity=0.278  Sum_probs=68.8

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCC-EEeecCCCccchhHHHHHHHhhcC
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD-ETAKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      +....++++++||-+|||. |..+..+++..+...|++++.+++..+.+++.-.. ..+.     .+...    +.  ..
T Consensus        24 l~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~-----~d~~~----~~--~~   91 (258)
T PRK01683         24 LARVPLENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVE-----ADIAS----WQ--PP   91 (258)
T ss_pred             HhhCCCcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEE-----Cchhc----cC--CC
Confidence            4446678899999999876 77788888877544899999999988887764321 1111     12111    11  13


Q ss_pred             CCccEEEEccCC------hHHHHHHHHhhcCCCEEEEEc
Q 018075          250 SGIDVSFDCVGF------DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       250 ~~~d~vld~~g~------~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ..+|+|+....-      ...++.+.+.|+|||+++...
T Consensus        92 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~~~~~~  130 (258)
T PRK01683         92 QALDLIFANASLQWLPDHLELFPRLVSLLAPGGVLAVQM  130 (258)
T ss_pred             CCccEEEEccChhhCCCHHHHHHHHHHhcCCCcEEEEEC
Confidence            479999865431      246888999999999998753

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=96.34  E-value=0.07  Score=52.07  Aligned_cols=45  Identities=20%  Similarity=0.242  Sum_probs=36.8

Q ss_pred             hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH
Q 018075          173 RANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI  218 (361)
Q Consensus       173 ~~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~  218 (361)
                      ..+.+.|.++||.| +|.+|..+++.+...|+ .|+++.++.++.+.
T Consensus        74 ~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~  119 (576)
T PLN03209         74 ELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAES  119 (576)
T ss_pred             ccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHH
Confidence            46678999999998 59999999998888899 57777787776543

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=96.33  E-value=0.043  Score=44.23  Aligned_cols=95  Identities=19%  Similarity=0.237  Sum_probs=61.2

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCcc
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      ...-.|.+++|.|-|.+|.-.++.++.+|+ +|++++.++-+.-.+..-|....        ..    .+.    -...|
T Consensus        18 ~~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~v~--------~~----~~a----~~~ad   80 (162)
T PF00670_consen   18 NLMLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFEVM--------TL----EEA----LRDAD   80 (162)
T ss_dssp             -S--TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-EEE---------H----HHH----TTT-S
T ss_pred             ceeeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcEec--------CH----HHH----HhhCC
Confidence            345689999999999999999999999999 78999998877665555565321        11    111    24689


Q ss_pred             EEEEccCChHH-HHHHHHhhcCCCEEEEEccCC
Q 018075          254 VSFDCVGFDKT-MSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       254 ~vld~~g~~~~-~~~~~~~l~~~G~~v~~g~~~  285 (361)
                      +++.+.|.... ..+-++.|+.+..+..+|-.+
T Consensus        81 i~vtaTG~~~vi~~e~~~~mkdgail~n~Gh~d  113 (162)
T PF00670_consen   81 IFVTATGNKDVITGEHFRQMKDGAILANAGHFD  113 (162)
T ss_dssp             EEEE-SSSSSSB-HHHHHHS-TTEEEEESSSST
T ss_pred             EEEECCCCccccCHHHHHHhcCCeEEeccCcCc
Confidence            99999997643 467788898888666665444

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK08339 short chain dehydrogenase; Provisional

Probab=96.33  E-value=0.094  Score=46.37  Aligned_cols=81  Identities=21%  Similarity=0.220  Sum_probs=51.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHc----CCC-EEeecC-CCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL----GAD-ETAKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l----g~~-~~~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      +|.++||.| ++++|.+.++.+...|+ .|+.++++.++.+.+ +++    +.. ..+..+ .+..+....+.++.+  -
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~--~   83 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKN--I   83 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHh--h
Confidence            478899998 58999999999988999 577788877665433 222    222 112111 223344444444432  2


Q ss_pred             CCccEEEEccCC
Q 018075          250 SGIDVSFDCVGF  261 (361)
Q Consensus       250 ~~~d~vld~~g~  261 (361)
                      +++|+++++.|.
T Consensus        84 g~iD~lv~nag~   95 (263)
T PRK08339         84 GEPDIFFFSTGG   95 (263)
T ss_pred             CCCcEEEECCCC
Confidence            469999998874

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=96.33  E-value=0.059  Score=48.94  Aligned_cols=91  Identities=24%  Similarity=0.338  Sum_probs=61.8

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCC-CEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEc
Q 018075          180 TNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  258 (361)
Q Consensus       180 ~~vlI~G~g~~G~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  258 (361)
                      .+|.|+|+|.+|...+..++..|. ..|++.++++++.+.+++.|......     .+..+.        -.+.|+||.|
T Consensus         7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~-----~~~~~~--------~~~aDvViia   73 (307)
T PRK07502          7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT-----TSAAEA--------VKGADLVILC   73 (307)
T ss_pred             cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec-----CCHHHH--------hcCCCEEEEC
Confidence            689999999999999998888885 36888899998888888877532111     111111        1468999999


Q ss_pred             cCChH---HHHHHHHhhcCCCEEEEEcc
Q 018075          259 VGFDK---TMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       259 ~g~~~---~~~~~~~~l~~~G~~v~~g~  283 (361)
                      +....   .++.+...++++..++.++.
T Consensus        74 vp~~~~~~v~~~l~~~l~~~~iv~dvgs  101 (307)
T PRK07502         74 VPVGASGAVAAEIAPHLKPGAIVTDVGS  101 (307)
T ss_pred             CCHHHHHHHHHHHHhhCCCCCEEEeCcc
Confidence            98642   13334445667776666653

>PRK04148 hypothetical protein; Provisional

Probab=96.31  E-value=0.057  Score=42.10  Aligned_cols=95  Identities=12%  Similarity=0.174  Sum_probs=63.2

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccE
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV  254 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  254 (361)
                      .-.++.+++++|+| .|...+..+...|. .|+++|.++++.+.+++.+.+.+.+ +--+.++  .   +    -.++|+
T Consensus        13 ~~~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~d-Dlf~p~~--~---~----y~~a~l   80 (134)
T PRK04148         13 EKGKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVD-DLFNPNL--E---I----YKNAKL   80 (134)
T ss_pred             ccccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEEC-cCCCCCH--H---H----HhcCCE
Confidence            33467899999998 78755555667898 7999999999999999888655432 1111111  1   1    257999


Q ss_pred             EEEccCChHHHHHHHHhhcC-CCEEEEE
Q 018075          255 SFDCVGFDKTMSTALNATRP-GGKVCLI  281 (361)
Q Consensus       255 vld~~g~~~~~~~~~~~l~~-~G~~v~~  281 (361)
                      ++..-..++....+++.-+. +.-++..
T Consensus        81 iysirpp~el~~~~~~la~~~~~~~~i~  108 (134)
T PRK04148         81 IYSIRPPRDLQPFILELAKKINVPLIIK  108 (134)
T ss_pred             EEEeCCCHHHHHHHHHHHHHcCCCEEEE
Confidence            99998877655555554433 3444443

>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []

Probab=96.31  E-value=0.017  Score=50.37  Aligned_cols=110  Identities=25%  Similarity=0.398  Sum_probs=66.3

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHH
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~  245 (361)
                      +..++++||++|+=.|+|+ |.+...+++..| --+|+..+.++++.+.+++    .|....+....  .|..+.-  +.
T Consensus        33 ~~~l~i~pG~~VlEaGtGS-G~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~--~Dv~~~g--~~  107 (247)
T PF08704_consen   33 LMRLDIRPGSRVLEAGTGS-GSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHH--RDVCEEG--FD  107 (247)
T ss_dssp             HHHTT--TT-EEEEE--TT-SHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEE--S-GGCG----S
T ss_pred             HHHcCCCCCCEEEEecCCc-HHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEe--cceeccc--cc
Confidence            4568899999999998665 667777887775 2379999999998876654    55432111111  1221000  00


Q ss_pred             hhcCCCccEEEEccCCh-HHHHHHHHhh-cCCCEEEEEccCC
Q 018075          246 NAMGSGIDVSFDCVGFD-KTMSTALNAT-RPGGKVCLIGLAK  285 (361)
Q Consensus       246 ~~~~~~~d~vld~~g~~-~~~~~~~~~l-~~~G~~v~~g~~~  285 (361)
                      ......+|.||=-...| ..+..+.+.| ++||+++++...-
T Consensus       108 ~~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fsP~i  149 (247)
T PF08704_consen  108 EELESDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFSPCI  149 (247)
T ss_dssp             TT-TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEESSH
T ss_pred             ccccCcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCH
Confidence            00135688885444444 5889999999 8999999986543

; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.

>PLN02476 O-methyltransferase

Probab=96.31  E-value=0.079  Score=47.00  Aligned_cols=105  Identities=16%  Similarity=0.210  Sum_probs=69.5

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhhc
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      .+..+..+||-+|++. |..++.+|+.++ -..+++++.++++.+.+++    .|..+-+.+..  ++..+.+.++....
T Consensus       114 ~~~~~ak~VLEIGT~t-GySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~--GdA~e~L~~l~~~~  190 (278)
T PLN02476        114 VQILGAERCIEVGVYT-GYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKH--GLAAESLKSMIQNG  190 (278)
T ss_pred             HHhcCCCeEEEecCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--cCHHHHHHHHHhcc
Confidence            5567789999999644 667777777764 2268999999988777644    56543222222  45555555543211


Q ss_pred             -CCCccEEEEccCCh---HHHHHHHHhhcCCCEEEEE
Q 018075          249 -GSGIDVSFDCVGFD---KTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       249 -~~~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~~  281 (361)
                       ...||+||--....   ..++.+++.|++||.++.=
T Consensus       191 ~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~D  227 (278)
T PLN02476        191 EGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVMD  227 (278)
T ss_pred             cCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEEEEe
Confidence             35799998765533   3577788999999988764

>TIGR00563 rsmB ribosomal RNA small subunit methyltransferase RsmB

Probab=96.26  E-value=0.084  Score=50.29  Aligned_cols=104  Identities=15%  Similarity=0.154  Sum_probs=64.9

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHH----HcCCCEEe-ecCCCccchhHHHHHHH
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGADETA-KVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~~~-~~~~~~~~~~~~~~~~~  245 (361)
                      ....++++|++||=+|||+ |..++++++.++...+++++.++++.+.++    .+|....+ ....+......    . 
T Consensus       231 ~~~L~~~~g~~VLDlcag~-G~kt~~la~~~~~~~v~a~D~~~~~l~~~~~n~~r~g~~~~v~~~~~d~~~~~~----~-  304 (426)
T TIGR00563       231 ATWLAPQNEETILDACAAP-GGKTTHILELAPQAQVVALDIHEHRLKRVYENLKRLGLTIKAETKDGDGRGPSQ----W-  304 (426)
T ss_pred             HHHhCCCCCCeEEEeCCCc-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeccccccccc----c-
Confidence            3445688999999998766 556667777665337999999999876554    45654211 11111111100    0 


Q ss_pred             hhcCCCccEEEE---ccCCh-------------------------HHHHHHHHhhcCCCEEEEE
Q 018075          246 NAMGSGIDVSFD---CVGFD-------------------------KTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       246 ~~~~~~~d~vld---~~g~~-------------------------~~~~~~~~~l~~~G~~v~~  281 (361)
                       .....||.||-   |+|..                         ..+..+++.|+|||+++..
T Consensus       305 -~~~~~fD~VllDaPcSg~G~~~~~p~~~~~~~~~~~~~l~~lQ~~lL~~a~~~LkpgG~lvys  367 (426)
T TIGR00563       305 -AENEQFDRILLDAPCSATGVIRRHPDIKWLRKPRDIAELAELQSEILDAIWPLLKTGGTLVYA  367 (426)
T ss_pred             -ccccccCEEEEcCCCCCCcccccCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence             01356999974   44421                         3667788999999999864

The seed alignment is built from bacterial sequences only. Eukaryotic homologs include Nop2, a protein required for processing pre-rRNA, that is likely also a rRNA methyltransferase, although the fine specificity may differ. Cutoff scores are set to avoid treating archaeal and eukaroytic homologs automatically as functionally equivalent, although they may have very similar roles.

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=96.24  E-value=0.076  Score=43.92  Aligned_cols=92  Identities=15%  Similarity=0.194  Sum_probs=59.8

Q ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccC
Q 018075          182 VMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG  260 (361)
Q Consensus       182 vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  260 (361)
                      |+|.| +|.+|...++.+...|. .|.++.+++++.+.  ..+... +..+-  .+.. .+.+..    .++|.||.+.|
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~~-~~~d~--~d~~-~~~~al----~~~d~vi~~~~   69 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVEI-IQGDL--FDPD-SVKAAL----KGADAVIHAAG   69 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEEE-EESCT--TCHH-HHHHHH----TTSSEEEECCH
T ss_pred             eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--cccccc-ceeee--hhhh-hhhhhh----hhcchhhhhhh
Confidence            68999 49999999999999997 68888888887766  334433 22222  2332 222221    37999999998


Q ss_pred             Ch----HHHHHHHHhhcCC--CEEEEEccC
Q 018075          261 FD----KTMSTALNATRPG--GKVCLIGLA  284 (361)
Q Consensus       261 ~~----~~~~~~~~~l~~~--G~~v~~g~~  284 (361)
                      ..    .....+++.+...  .+++.++..
T Consensus        70 ~~~~~~~~~~~~~~a~~~~~~~~~v~~s~~   99 (183)
T PF13460_consen   70 PPPKDVDAAKNIIEAAKKAGVKRVVYLSSA   99 (183)
T ss_dssp             STTTHHHHHHHHHHHHHHTTSSEEEEEEET
T ss_pred             hhcccccccccccccccccccccceeeecc
Confidence            42    2455555555433  377776643

...

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.22  E-value=0.16  Score=43.03  Aligned_cols=90  Identities=16%  Similarity=0.191  Sum_probs=57.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChh-HHHHHHHcC-CCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ-RLSIARNLG-ADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~-~~~~~~~lg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      .|.+|||+|+|.+|..-++.+...|+ .|.+++.... ..+.+.+.| ... +   ..  ++...  .     -.++++|
T Consensus         8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~-~---~~--~~~~~--d-----l~~~~lV   73 (205)
T TIGR01470         8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITW-L---AR--CFDAD--I-----LEGAFLV   73 (205)
T ss_pred             CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEE-E---eC--CCCHH--H-----hCCcEEE
Confidence            47899999999999999999999999 4566544322 222222233 211 1   11  11111  1     2479999


Q ss_pred             EEccCChHHHHHHHHhhcCCCEEEEE
Q 018075          256 FDCVGFDKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       256 ld~~g~~~~~~~~~~~l~~~G~~v~~  281 (361)
                      |-+.+.++.-..+....+..|.++-+
T Consensus        74 i~at~d~~ln~~i~~~a~~~~ilvn~   99 (205)
T TIGR01470        74 IAATDDEELNRRVAHAARARGVPVNV   99 (205)
T ss_pred             EECCCCHHHHHHHHHHHHHcCCEEEE
Confidence            99999875556666666677766644

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PRK08267 short chain dehydrogenase; Provisional

Probab=96.21  E-value=0.1  Score=45.88  Aligned_cols=80  Identities=30%  Similarity=0.392  Sum_probs=50.4

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcC-CC-EE--eecCCCccchhHHHHHHHhhcCCCcc
Q 018075          180 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLG-AD-ET--AKVSTDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       180 ~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg-~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      .++||.| +|.+|...++.+...|+ .|+.++++.++.+.+ +.++ .. ..  .|. .+..+..+.+.++......++|
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~v~~~~~~~~~~~~~~id   79 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDV-TDRAAWDAALADFAAATGGRLD   79 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecC-CCHHHHHHHHHHHHHHcCCCCC
Confidence            4689998 59999999998888899 677887877765544 3333 11 11  222 2223333444443322145799


Q ss_pred             EEEEccCC
Q 018075          254 VSFDCVGF  261 (361)
Q Consensus       254 ~vld~~g~  261 (361)
                      +++.+.|.
T Consensus        80 ~vi~~ag~   87 (260)
T PRK08267         80 VLFNNAGI   87 (260)
T ss_pred             EEEECCCC
Confidence            99998875

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.21  E-value=0.19  Score=44.80  Aligned_cols=105  Identities=20%  Similarity=0.242  Sum_probs=64.4

Q ss_pred             CCCEEEEECC---CHHHHHHHHHHHHcCCCEEEEEeCChh---HHH-HHHHcCCCEEeecC-CCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMGS---GPIGLVTLLAARAFGAPRIIITDVDVQ---RLS-IARNLGADETAKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G~---g~~G~~ai~la~~~g~~~vv~v~~~~~---~~~-~~~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      .|.++||.|+   +++|.+.++.+...|+ .|+.+.++++   +.+ ..++++....+..+ .+.++....+.++.+. .
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~-~   81 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKD-L   81 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHH-c
Confidence            4688999985   5899999998888999 5666666642   222 33445533222211 2233444444444332 2


Q ss_pred             CCccEEEEccCCh--------------H---------------HHHHHHHhhcCCCEEEEEccC
Q 018075          250 SGIDVSFDCVGFD--------------K---------------TMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       250 ~~~d~vld~~g~~--------------~---------------~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      +++|+++++.|..              +               ..+..++.|..+|+++.++..
T Consensus        82 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~  145 (274)
T PRK08415         82 GKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYL  145 (274)
T ss_pred             CCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecC
Confidence            5799999998741              1               234455667778999887643

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.18  E-value=0.024  Score=50.79  Aligned_cols=76  Identities=14%  Similarity=0.163  Sum_probs=51.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCCE-EeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADE-TAKVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      ++.++||+|+|+.+.+++.-+...|+..+..+.++.+|.+ ++++++... +..+.    .. ..+...    -..+|+|
T Consensus       124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~----~~-~~~~~~----~~~~DiV  194 (282)
T TIGR01809       124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE----GD-SGGLAI----EKAAEVL  194 (282)
T ss_pred             CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc----ch-hhhhhc----ccCCCEE
Confidence            5789999999999999999999999988888888887765 444444221 11110    00 011111    2469999


Q ss_pred             EEccCCh
Q 018075          256 FDCVGFD  262 (361)
Q Consensus       256 ld~~g~~  262 (361)
                      ++|++..
T Consensus       195 InaTp~g  201 (282)
T TIGR01809       195 VSTVPAD  201 (282)
T ss_pred             EECCCCC
Confidence            9998754

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=96.17  E-value=0.1  Score=45.03  Aligned_cols=100  Identities=18%  Similarity=0.222  Sum_probs=64.1

Q ss_pred             HHHHhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCC--EEEEEeCC----hhH--------HHHHHHcCCCEEeecCCC
Q 018075          169 HACRRAN-VGPETNVMIMGSGPIGLVTLLAARAFGAP--RIIITDVD----VQR--------LSIARNLGADETAKVSTD  233 (361)
Q Consensus       169 ~~l~~~~-~~~g~~vlI~G~g~~G~~ai~la~~~g~~--~vv~v~~~----~~~--------~~~~~~lg~~~~~~~~~~  233 (361)
                      .+++..+ --++.+++|+|+|+.|.+++..+...|+.  ++..++++    .++        .+++++++... ..    
T Consensus        14 ~al~~~g~~l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~~----   88 (226)
T cd05311          14 NALKLVGKKIEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-TG----   88 (226)
T ss_pred             HHHHHhCCCccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-cc----
Confidence            3444433 24678999999999999999988889998  89999887    343        34555544211 00    


Q ss_pred             ccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEc
Q 018075          234 IEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g  282 (361)
                       .++.+.   +     .++|++|++++..-.....++.|.++..+..+.
T Consensus        89 -~~l~~~---l-----~~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~ls  128 (226)
T cd05311          89 -GTLKEA---L-----KGADVFIGVSRPGVVKKEMIKKMAKDPIVFALA  128 (226)
T ss_pred             -CCHHHH---H-----hcCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeC
Confidence             122222   1     348999999873322346677777776555443

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK14903 16S rRNA methyltransferase B; Provisional

Probab=96.15  E-value=0.11  Score=49.38  Aligned_cols=101  Identities=16%  Similarity=0.252  Sum_probs=64.3

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhh
Q 018075          173 RANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       173 ~~~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~  247 (361)
                      ..++++|++||=+|||+ |.-+++++..++ ...|+++|.++++.+.+++    +|.+.+.....   +... +...   
T Consensus       232 ~l~~~~g~~VLD~cagp-Ggkt~~la~~~~~~g~V~a~Dis~~rl~~~~~n~~r~g~~~v~~~~~---Da~~-l~~~---  303 (431)
T PRK14903        232 LMELEPGLRVLDTCAAP-GGKTTAIAELMKDQGKILAVDISREKIQLVEKHAKRLKLSSIEIKIA---DAER-LTEY---  303 (431)
T ss_pred             HhCCCCCCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEEC---chhh-hhhh---
Confidence            35788999999988766 556667777762 2379999999998876644    56554322212   2111 1111   


Q ss_pred             cCCCccEEEE---ccCCh-------------------------HHHHHHHHhhcCCCEEEEE
Q 018075          248 MGSGIDVSFD---CVGFD-------------------------KTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       248 ~~~~~d~vld---~~g~~-------------------------~~~~~~~~~l~~~G~~v~~  281 (361)
                      ....||.||-   |+|..                         ..+..+++.|+|||+++..
T Consensus       304 ~~~~fD~Vl~DaPCsg~G~~~~~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYs  365 (431)
T PRK14903        304 VQDTFDRILVDAPCTSLGTARNHPEVLRRVNKEDFKKLSEIQLRIVSQAWKLLEKGGILLYS  365 (431)
T ss_pred             hhccCCEEEECCCCCCCccccCChHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence            1346999974   44331                         1366788999999998754

>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed

Probab=96.09  E-value=0.078  Score=44.94  Aligned_cols=98  Identities=14%  Similarity=0.109  Sum_probs=64.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhhcCCCcc
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      ++.+||-+|||. |..+..+++......+++++.+++..+.+++    .+...+....   .+....+...  .....+|
T Consensus        40 ~~~~VLDiGcGt-G~~~~~la~~~p~~~v~gVD~s~~~i~~a~~~~~~~~~~~v~~~~---~d~~~~l~~~--~~~~~~D  113 (202)
T PRK00121         40 DAPIHLEIGFGK-GEFLVEMAKANPDINFIGIEVHEPGVGKALKKIEEEGLTNLRLLC---GDAVEVLLDM--FPDGSLD  113 (202)
T ss_pred             CCCeEEEEccCC-CHHHHHHHHHCCCccEEEEEechHHHHHHHHHHHHcCCCCEEEEe---cCHHHHHHHH--cCccccc
Confidence            678899999887 7788888887654479999999988876654    2333221111   2221122111  1245699


Q ss_pred             EEEEccC--------------ChHHHHHHHHhhcCCCEEEEE
Q 018075          254 VSFDCVG--------------FDKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       254 ~vld~~g--------------~~~~~~~~~~~l~~~G~~v~~  281 (361)
                      .|+-...              ....++.+.+.|+|+|.++..
T Consensus       114 ~V~~~~~~p~~~~~~~~~~~~~~~~l~~i~~~LkpgG~l~i~  155 (202)
T PRK00121        114 RIYLNFPDPWPKKRHHKRRLVQPEFLALYARKLKPGGEIHFA  155 (202)
T ss_pred             eEEEECCCCCCCccccccccCCHHHHHHHHHHcCCCCEEEEE
Confidence            9876432              134688899999999999875

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.08  E-value=0.12  Score=45.81  Aligned_cols=83  Identities=22%  Similarity=0.365  Sum_probs=54.7

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChh----HHHHHHHcC-C-CEEeecCCCccchhHHHHHHHhhcC
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ----RLSIARNLG-A-DETAKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~----~~~~~~~lg-~-~~~~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      -.|+.|||.| ++++|.+.++=...+|+ +++..|.+++    ..+.+++.| + .+..|. ++.++..+...++.+.. 
T Consensus        36 v~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdi-s~~eei~~~a~~Vk~e~-  112 (300)
T KOG1201|consen   36 VSGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDI-SDREEIYRLAKKVKKEV-  112 (300)
T ss_pred             ccCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecC-CCHHHHHHHHHHHHHhc-
Confidence            3689999998 47999888887777888 6777776654    334444444 2 234444 33445555555555543 


Q ss_pred             CCccEEEEccCCh
Q 018075          250 SGIDVSFDCVGFD  262 (361)
Q Consensus       250 ~~~d~vld~~g~~  262 (361)
                      +.+|++++.+|.-
T Consensus       113 G~V~ILVNNAGI~  125 (300)
T KOG1201|consen  113 GDVDILVNNAGIV  125 (300)
T ss_pred             CCceEEEeccccc
Confidence            4899999988754

>PRK06057 short chain dehydrogenase; Provisional

Probab=96.07  E-value=0.069  Score=46.89  Aligned_cols=81  Identities=25%  Similarity=0.347  Sum_probs=51.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCCEE-eecCCCccchhHHHHHHHhhcCCCccE
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDV  254 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~  254 (361)
                      +|.++||.| +|++|.+.++.+...|+ .|+.+++++.+.+ ..++++.... .+. .+..+..+...++... ..++|+
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~~~id~   82 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDV-TDEDAVNALFDTAAET-YGSVDI   82 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeC-CCHHHHHHHHHHHHHH-cCCCCE
Confidence            578999999 59999999998888999 5777777776554 3344544222 122 2222333333333221 247999


Q ss_pred             EEEccCC
Q 018075          255 SFDCVGF  261 (361)
Q Consensus       255 vld~~g~  261 (361)
                      ++.+.|.
T Consensus        83 vi~~ag~   89 (255)
T PRK06057         83 AFNNAGI   89 (255)
T ss_pred             EEECCCc
Confidence            9998864

>PRK10258 biotin biosynthesis protein BioC; Provisional

Probab=96.06  E-value=0.44  Score=41.75  Aligned_cols=100  Identities=20%  Similarity=0.322  Sum_probs=65.4

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCC-EEeecCCCccchhHHHHHHHhhcCC
Q 018075          172 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD-ETAKVSTDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       172 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~  250 (361)
                      +.....++.+||-+|||. |..+..+++ .|. .++++|.+++..+.+++.... ..+.  .   +...    +. ....
T Consensus        36 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~~~D~s~~~l~~a~~~~~~~~~~~--~---d~~~----~~-~~~~  102 (251)
T PRK10258         36 AMLPQRKFTHVLDAGCGP-GWMSRYWRE-RGS-QVTALDLSPPMLAQARQKDAADHYLA--G---DIES----LP-LATA  102 (251)
T ss_pred             HhcCccCCCeEEEeeCCC-CHHHHHHHH-cCC-eEEEEECCHHHHHHHHhhCCCCCEEE--c---Cccc----Cc-CCCC
Confidence            334445678999999876 666666655 566 799999999988888775421 1111  1   1111    10 1235


Q ss_pred             CccEEEEccC------ChHHHHHHHHhhcCCCEEEEEccC
Q 018075          251 GIDVSFDCVG------FDKTMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       251 ~~d~vld~~g------~~~~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      .||+|+....      ....+.++.+.|+|||.++.....
T Consensus       103 ~fD~V~s~~~l~~~~d~~~~l~~~~~~Lk~gG~l~~~~~~  142 (251)
T PRK10258        103 TFDLAWSNLAVQWCGNLSTALRELYRVVRPGGVVAFTTLV  142 (251)
T ss_pred             cEEEEEECchhhhcCCHHHHHHHHHHHcCCCeEEEEEeCC
Confidence            6999987542      124678889999999999876543

>PRK06139 short chain dehydrogenase; Provisional

Probab=96.05  E-value=0.071  Score=48.95  Aligned_cols=81  Identities=33%  Similarity=0.426  Sum_probs=52.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH----HHcCCCEE---eecCCCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADET---AKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      ++.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+    ++.|....   .|+ .+.++..+...++.+ ..
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv-~d~~~v~~~~~~~~~-~~   82 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDV-TDADQVKALATQAAS-FG   82 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeC-CCHHHHHHHHHHHHH-hc
Confidence            568999998 59999999999999999 577788887765432    33454321   122 222333333333332 23


Q ss_pred             CCccEEEEccCC
Q 018075          250 SGIDVSFDCVGF  261 (361)
Q Consensus       250 ~~~d~vld~~g~  261 (361)
                      +++|+++++.|.
T Consensus        83 g~iD~lVnnAG~   94 (330)
T PRK06139         83 GRIDVWVNNVGV   94 (330)
T ss_pred             CCCCEEEECCCc
Confidence            579999999874

>PRK07576 short chain dehydrogenase; Provisional

Probab=96.03  E-value=0.23  Score=43.91  Aligned_cols=81  Identities=20%  Similarity=0.284  Sum_probs=49.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHc---CCC-EEeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNL---GAD-ETAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~l---g~~-~~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      ++.++||.| +|++|...++.+...|+ .|+.++++.++.+ ..+++   +.. ..+..+ .+..+....+.++... ..
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~-~~   85 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADE-FG   85 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence            578999998 59999999998888999 5788877765543 22222   222 111111 1223344444443322 24


Q ss_pred             CccEEEEccC
Q 018075          251 GIDVSFDCVG  260 (361)
Q Consensus       251 ~~d~vld~~g  260 (361)
                      ++|++|.+.|
T Consensus        86 ~iD~vi~~ag   95 (264)
T PRK07576         86 PIDVLVSGAA   95 (264)
T ss_pred             CCCEEEECCC
Confidence            7999998875

>PRK07806 short chain dehydrogenase; Provisional

Probab=96.00  E-value=0.14  Score=44.56  Aligned_cols=104  Identities=19%  Similarity=0.237  Sum_probs=60.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCh-hHHH-HH---HHcCCCE-EeecC-CCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDV-QRLS-IA---RNLGADE-TAKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~-~~~~-~~---~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      ++.++||.| +|.+|...+..+...|. .|+.+.++. ++.+ +.   +..+... .+..+ .+.++..+.+.++... .
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   82 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREE-F   82 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh-C
Confidence            467899998 59999999998888898 466665543 2222 22   2223221 11111 2223333334333321 2


Q ss_pred             CCccEEEEccCCh-------------------HHHHHHHHhhcCCCEEEEEcc
Q 018075          250 SGIDVSFDCVGFD-------------------KTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       250 ~~~d~vld~~g~~-------------------~~~~~~~~~l~~~G~~v~~g~  283 (361)
                      .++|+++.+.+..                   ..++.+.+.+..+|+++.++.
T Consensus        83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS  135 (248)
T PRK07806         83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS  135 (248)
T ss_pred             CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence            4699999887642                   234455555666789988864

>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases

Probab=96.00  E-value=0.048  Score=46.22  Aligned_cols=104  Identities=24%  Similarity=0.303  Sum_probs=69.4

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcC--CCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhhc
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARAFG--APRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g--~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      +.....+||-+|++. |+.++.+|+.+.  . ++++++.++++.+.+++    .|...-+.+..  .+..+.+.++....
T Consensus        42 ~~~~~k~vLEIGt~~-GySal~la~~l~~~g-~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~--gda~~~l~~l~~~~  117 (205)
T PF01596_consen   42 RLTRPKRVLEIGTFT-GYSALWLAEALPEDG-KITTIEIDPERAEIARENFRKAGLDDRIEVIE--GDALEVLPELANDG  117 (205)
T ss_dssp             HHHT-SEEEEESTTT-SHHHHHHHHTSTTTS-EEEEEESSHHHHHHHHHHHHHTTGGGGEEEEE--S-HHHHHHHHHHTT
T ss_pred             HhcCCceEEEecccc-ccHHHHHHHhhcccc-eEEEecCcHHHHHHHHHHHHhcCCCCcEEEEE--eccHhhHHHHHhcc
Confidence            345668999999765 888889998763  5 79999999998877754    45432222211  45556666554322


Q ss_pred             -CCCccEEEEccCCh---HHHHHHHHhhcCCCEEEEEc
Q 018075          249 -GSGIDVSFDCVGFD---KTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       249 -~~~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~~g  282 (361)
                       .+.||+||--..-.   ..+..+++.|++||.++.=.
T Consensus       118 ~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~ggvii~DN  155 (205)
T PF01596_consen  118 EEGQFDFVFIDADKRNYLEYFEKALPLLRPGGVIIADN  155 (205)
T ss_dssp             TTTSEEEEEEESTGGGHHHHHHHHHHHEEEEEEEEEET
T ss_pred             CCCceeEEEEcccccchhhHHHHHhhhccCCeEEEEcc
Confidence             25799997654433   35667889999999888754

The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=95.98  E-value=0.054  Score=50.89  Aligned_cols=93  Identities=18%  Similarity=0.308  Sum_probs=57.6

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCC-EEEEEeCChhHHHHHHH--cCCC-EEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          182 VMIMGSGPIGLVTLLAARAFGAP-RIIITDVDVQRLSIARN--LGAD-ETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       182 vlI~G~g~~G~~ai~la~~~g~~-~vv~v~~~~~~~~~~~~--lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      |+|+|+|.+|..+++.+...+-. .|+.++++.++.+.+.+  .+.. .....+.  .+..+ +.++.    .+.|+|++
T Consensus         1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~--~~~~~-l~~~~----~~~dvVin   73 (386)
T PF03435_consen    1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDV--NDPES-LAELL----RGCDVVIN   73 (386)
T ss_dssp             EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--T--TTHHH-HHHHH----TTSSEEEE
T ss_pred             CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEec--CCHHH-HHHHH----hcCCEEEE
Confidence            68899999999999988777643 78999999998765543  2221 1122121  22222 44432    46799999


Q ss_pred             ccCChHHHHHHHHhhcCCCEEEEE
Q 018075          258 CVGFDKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       258 ~~g~~~~~~~~~~~l~~~G~~v~~  281 (361)
                      |+|......-+-.++..+-+++..
T Consensus        74 ~~gp~~~~~v~~~~i~~g~~yvD~   97 (386)
T PF03435_consen   74 CAGPFFGEPVARACIEAGVHYVDT   97 (386)
T ss_dssp             -SSGGGHHHHHHHHHHHT-EEEES
T ss_pred             CCccchhHHHHHHHHHhCCCeecc
Confidence            999664555566677778888773

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PLN02823 spermine synthase

Probab=95.97  E-value=0.11  Score=47.62  Aligned_cols=97  Identities=19%  Similarity=0.265  Sum_probs=63.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCC-C------EEeecCCCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA-D------ETAKVSTDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~-~------~~~~~~~~~~~~~~~~~~~~~~~~~  250 (361)
                      ...+|||+|+|. |..+..+++..+..++++++-+++-.++++++-. .      .-+.+  ...|....+++    ...
T Consensus       103 ~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v--~~~Da~~~L~~----~~~  175 (336)
T PLN02823        103 NPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLEL--IINDARAELEK----RDE  175 (336)
T ss_pred             CCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEE--EEChhHHHHhh----CCC
Confidence            457999999765 6667778887777789999999999999887431 1      10010  01233333322    246


Q ss_pred             CccEEEEccCC------------hHHHH-HHHHhhcCCCEEEEE
Q 018075          251 GIDVSFDCVGF------------DKTMS-TALNATRPGGKVCLI  281 (361)
Q Consensus       251 ~~d~vld~~g~------------~~~~~-~~~~~l~~~G~~v~~  281 (361)
                      .+|+||--...            .+.++ .+.+.|+++|.++.-
T Consensus       176 ~yDvIi~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~Gvlv~q  219 (336)
T PLN02823        176 KFDVIIGDLADPVEGGPCYQLYTKSFYERIVKPKLNPGGIFVTQ  219 (336)
T ss_pred             CccEEEecCCCccccCcchhhccHHHHHHHHHHhcCCCcEEEEe
Confidence            79999764321            12455 678899999988753

>PRK07574 formate dehydrogenase; Provisional

Probab=95.96  E-value=0.15  Score=47.61  Aligned_cols=92  Identities=22%  Similarity=0.251  Sum_probs=63.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      .|.+|.|+|.|.+|...++.++.+|. .|.+.++.....+..++++...   +    .++.+    +.    ...|+|+-
T Consensus       191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g~~~---~----~~l~e----ll----~~aDvV~l  254 (385)
T PRK07574        191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELGLTY---H----VSFDS----LV----SVCDVVTI  254 (385)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcCcee---c----CCHHH----Hh----hcCCEEEE
Confidence            57899999999999999999999999 6888887654444444555421   1    12222    21    46899988


Q ss_pred             ccCChHHH-----HHHHHhhcCCCEEEEEccCC
Q 018075          258 CVGFDKTM-----STALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       258 ~~g~~~~~-----~~~~~~l~~~G~~v~~g~~~  285 (361)
                      +.......     ...+..|+++..+|-++...
T Consensus       255 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~  287 (385)
T PRK07574        255 HCPLHPETEHLFDADVLSRMKRGSYLVNTARGK  287 (385)
T ss_pred             cCCCCHHHHHHhCHHHHhcCCCCcEEEECCCCc
Confidence            77644333     34567889998887776544

>PRK03612 spermidine synthase; Provisional

Probab=95.95  E-value=0.078  Score=51.84  Aligned_cols=97  Identities=16%  Similarity=0.172  Sum_probs=64.3

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcC-C----------CEEeecCCCccchhHHHHHHH
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG-A----------DETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg-~----------~~~~~~~~~~~~~~~~~~~~~  245 (361)
                      ++.++||++|+|. |..+..+++.-+..+++.++.+++-.+.+++.. .          +.+...   ..|..+.+++  
T Consensus       296 ~~~~rVL~IG~G~-G~~~~~ll~~~~v~~v~~VEid~~vi~~ar~~~~l~~~~~~~~~dprv~vi---~~Da~~~l~~--  369 (521)
T PRK03612        296 ARPRRVLVLGGGD-GLALREVLKYPDVEQVTLVDLDPAMTELARTSPALRALNGGALDDPRVTVV---NDDAFNWLRK--  369 (521)
T ss_pred             CCCCeEEEEcCCc-cHHHHHHHhCCCcCeEEEEECCHHHHHHHHhCCcchhhhccccCCCceEEE---EChHHHHHHh--
Confidence            5678999999775 667777777544468999999999999888721 0          111111   1233333322  


Q ss_pred             hhcCCCccEEEEccCCh-----------HHHHHHHHhhcCCCEEEEE
Q 018075          246 NAMGSGIDVSFDCVGFD-----------KTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       246 ~~~~~~~d~vld~~g~~-----------~~~~~~~~~l~~~G~~v~~  281 (361)
                        ...++|+|+-....+           +.++.+.+.|+|+|.++.-
T Consensus       370 --~~~~fDvIi~D~~~~~~~~~~~L~t~ef~~~~~~~L~pgG~lv~~  414 (521)
T PRK03612        370 --LAEKFDVIIVDLPDPSNPALGKLYSVEFYRLLKRRLAPDGLLVVQ  414 (521)
T ss_pred             --CCCCCCEEEEeCCCCCCcchhccchHHHHHHHHHhcCCCeEEEEe
Confidence              246899998754322           2567888999999998864

>PRK14901 16S rRNA methyltransferase B; Provisional

Probab=95.94  E-value=0.11  Score=49.59  Aligned_cols=104  Identities=18%  Similarity=0.230  Sum_probs=64.2

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHH----HcCCCEEeecCCCccchhHHHHHHHhh
Q 018075          173 RANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIAR----NLGADETAKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       173 ~~~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~~  247 (361)
                      ..++++|++||=+|||+ |..+..+++.++ ...|++++.++++.+.++    .+|.+.+.....   +........ ..
T Consensus       247 ~l~~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~rl~~~~~n~~r~g~~~v~~~~~---D~~~~~~~~-~~  321 (434)
T PRK14901        247 LLDPQPGEVILDACAAP-GGKTTHIAELMGDQGEIWAVDRSASRLKKLQENAQRLGLKSIKILAA---DSRNLLELK-PQ  321 (434)
T ss_pred             HhCCCCcCEEEEeCCCC-chhHHHHHHHhCCCceEEEEcCCHHHHHHHHHHHHHcCCCeEEEEeC---Chhhccccc-cc
Confidence            35678999999988765 555566676653 237999999998876654    467655333222   211110000 00


Q ss_pred             cCCCccEEEE---ccCC-------------------------hHHHHHHHHhhcCCCEEEEE
Q 018075          248 MGSGIDVSFD---CVGF-------------------------DKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       248 ~~~~~d~vld---~~g~-------------------------~~~~~~~~~~l~~~G~~v~~  281 (361)
                      ....||.||-   |+|.                         ...+..+++.|+|||+++..
T Consensus       322 ~~~~fD~Vl~DaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lkpgG~lvys  383 (434)
T PRK14901        322 WRGYFDRILLDAPCSGLGTLHRHPDARWRQTPEKIQELAPLQAELLESLAPLLKPGGTLVYA  383 (434)
T ss_pred             ccccCCEEEEeCCCCcccccccCcchhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence            1246999874   4442                         13477788999999998753

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=95.93  E-value=0.087  Score=47.19  Aligned_cols=46  Identities=28%  Similarity=0.385  Sum_probs=38.4

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHc
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL  222 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l  222 (361)
                      ..+.+|+|+|+|+.|.+++..+...|+..+..++++.+|.+.+ +.+
T Consensus       125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l  171 (284)
T PRK12549        125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALADEL  171 (284)
T ss_pred             ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHH
Confidence            4568999999999999999999999998899999988776544 444

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=95.93  E-value=0.25  Score=40.01  Aligned_cols=83  Identities=11%  Similarity=0.083  Sum_probs=51.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      .|.+|||+|+|.+|..-++.+...|++ |..++  ++..+.+.+++.-...   .  ..+.       ...-.++|+|+-
T Consensus        12 ~~~~vlVvGGG~va~rka~~Ll~~ga~-V~VIs--p~~~~~l~~l~~i~~~---~--~~~~-------~~dl~~a~lVia   76 (157)
T PRK06719         12 HNKVVVIIGGGKIAYRKASGLKDTGAF-VTVVS--PEICKEMKELPYITWK---Q--KTFS-------NDDIKDAHLIYA   76 (157)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEc--CccCHHHHhccCcEEE---e--cccC-------hhcCCCceEEEE
Confidence            678999999999999988888888994 55553  3333333445421111   1  1111       112357999999


Q ss_pred             ccCChHHHHHHHHhhcCCC
Q 018075          258 CVGFDKTMSTALNATRPGG  276 (361)
Q Consensus       258 ~~g~~~~~~~~~~~l~~~G  276 (361)
                      +.+.+ ..+..+..++..+
T Consensus        77 aT~d~-e~N~~i~~~a~~~   94 (157)
T PRK06719         77 ATNQH-AVNMMVKQAAHDF   94 (157)
T ss_pred             CCCCH-HHHHHHHHHHHHC
Confidence            99977 4555555444333

>PRK12939 short chain dehydrogenase; Provisional

Probab=95.93  E-value=0.2  Score=43.63  Aligned_cols=82  Identities=16%  Similarity=0.155  Sum_probs=49.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HH---cCCC-EEeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN---LGAD-ETAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~-~~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      ++.++||.| +|++|...+..+...|. .++.+++++++.+.. ++   .+.. ..+..+ .+..+..+...++... -.
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~   83 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAA-LG   83 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence            578899998 59999999998888999 577777776654322 22   2322 111111 1222233333333221 24


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|++|.+.|.
T Consensus        84 ~id~vi~~ag~   94 (250)
T PRK12939         84 GLDGLVNNAGI   94 (250)
T ss_pred             CCCEEEECCCC
Confidence            79999999875

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=95.93  E-value=0.28  Score=37.16  Aligned_cols=92  Identities=18%  Similarity=0.184  Sum_probs=62.6

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccCC
Q 018075          182 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGF  261 (361)
Q Consensus       182 vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~  261 (361)
                      |+|.|.|.+|...++.++..+. .|+.++.++++.+.+++.|... +.-+..  + .+.+++   .+-..++.++-+.+.
T Consensus         1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~~-i~gd~~--~-~~~l~~---a~i~~a~~vv~~~~~   72 (116)
T PF02254_consen    1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVEV-IYGDAT--D-PEVLER---AGIEKADAVVILTDD   72 (116)
T ss_dssp             EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSEE-EES-TT--S-HHHHHH---TTGGCESEEEEESSS
T ss_pred             eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhccccc-ccccch--h-hhHHhh---cCccccCEEEEccCC
Confidence            5788999999999999998665 7999999999999999888543 332221  1 122332   234679999988876


Q ss_pred             hHH---HHHHHHhhcCCCEEEEE
Q 018075          262 DKT---MSTALNATRPGGKVCLI  281 (361)
Q Consensus       262 ~~~---~~~~~~~l~~~G~~v~~  281 (361)
                      +..   .-...+.+.+..+++..
T Consensus        73 d~~n~~~~~~~r~~~~~~~ii~~   95 (116)
T PF02254_consen   73 DEENLLIALLARELNPDIRIIAR   95 (116)
T ss_dssp             HHHHHHHHHHHHHHTTTSEEEEE
T ss_pred             HHHHHHHHHHHHHHCCCCeEEEE
Confidence            632   22344556777777654

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK07060 short chain dehydrogenase; Provisional

Probab=95.89  E-value=0.084  Score=45.87  Aligned_cols=78  Identities=21%  Similarity=0.340  Sum_probs=50.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      ++.+++|.| +|.+|...++.+...|. .|+.++++.++.+.+ ++++... +..+-  .+.. .+.++... ..++|++
T Consensus         8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~-~~~D~--~~~~-~v~~~~~~-~~~~d~v   81 (245)
T PRK07060          8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEP-LRLDV--GDDA-AIRAALAA-AGAFDGL   81 (245)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeE-EEecC--CCHH-HHHHHHHH-hCCCCEE
Confidence            568999999 58999999999999999 577787877665443 4445433 22221  1211 22222221 3479999


Q ss_pred             EEccCC
Q 018075          256 FDCVGF  261 (361)
Q Consensus       256 ld~~g~  261 (361)
                      |++.|.
T Consensus        82 i~~ag~   87 (245)
T PRK07060         82 VNCAGI   87 (245)
T ss_pred             EECCCC
Confidence            998874

>PRK07109 short chain dehydrogenase; Provisional

Probab=95.89  E-value=0.23  Score=45.66  Aligned_cols=82  Identities=21%  Similarity=0.238  Sum_probs=51.1

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH----HHcCCCEE-eecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADET-AKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~-~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      ++.++||.| +|++|...++.+...|+ .|+.+++++++.+.+    ++.|.... +..+ .+.++..+...++.+. -+
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~-~g   84 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEE-LG   84 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH-CC
Confidence            467899998 59999999998888999 577777877665432    23343321 1111 2223333333333221 24


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|+++++.|.
T Consensus        85 ~iD~lInnAg~   95 (334)
T PRK07109         85 PIDTWVNNAMV   95 (334)
T ss_pred             CCCEEEECCCc
Confidence            79999999874

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.89  E-value=0.079  Score=46.51  Aligned_cols=81  Identities=17%  Similarity=0.176  Sum_probs=49.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEE-eCChhHHHHHHHcCCCEE-eecCCCccchhHHHHHHHhhcCCCccE
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIIT-DVDVQRLSIARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDV  254 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v-~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~  254 (361)
                      .+.++||.| +|++|.+.++.+...|++ |+.+ .++++..+.+++.+...+ .+. .+..+..+.+.++.+. -+++|+
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~~-v~~~~~~~~~~~~~l~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~-~~~id~   82 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGAK-VAVLYNSAENEAKELREKGVFTIKCDV-GNRDQVKKSKEVVEKE-FGRVDV   82 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCcHHHHHHHHhCCCeEEEecC-CCHHHHHHHHHHHHHH-cCCCCE
Confidence            467899998 599999999988889995 5544 344444444443343221 222 2333444444444332 247999


Q ss_pred             EEEccCC
Q 018075          255 SFDCVGF  261 (361)
Q Consensus       255 vld~~g~  261 (361)
                      ++.+.|.
T Consensus        83 li~~ag~   89 (255)
T PRK06463         83 LVNNAGI   89 (255)
T ss_pred             EEECCCc
Confidence            9998874

>PRK06949 short chain dehydrogenase; Provisional

Probab=95.88  E-value=0.099  Score=45.85  Aligned_cols=83  Identities=19%  Similarity=0.326  Sum_probs=52.8

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH-c---CC-CEEeecC-CCccchhHHHHHHHhhcC
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-L---GA-DETAKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-l---g~-~~~~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      ..+.++||.| +|.+|..++..+...|+ .|+.+.++.++.+.+.+ +   +. ...+..+ .+.++..+.+.++.. ..
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~   84 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAET-EA   84 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH-hc
Confidence            4578999998 59999999999888999 68888888776543322 2   21 1122211 222334444444332 23


Q ss_pred             CCccEEEEccCC
Q 018075          250 SGIDVSFDCVGF  261 (361)
Q Consensus       250 ~~~d~vld~~g~  261 (361)
                      .++|+++++.|.
T Consensus        85 ~~~d~li~~ag~   96 (258)
T PRK06949         85 GTIDILVNNSGV   96 (258)
T ss_pred             CCCCEEEECCCC
Confidence            579999999884

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=95.88  E-value=0.18  Score=40.89  Aligned_cols=82  Identities=21%  Similarity=0.243  Sum_probs=50.6

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCC--hhH-HHHHHH---cCCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075          180 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVD--VQR-LSIARN---LGADE-TAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       180 ~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~--~~~-~~~~~~---lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      +++||.| ++++|...++.+...|..+++.+.++  .++ .+++.+   .+... .+..+ .+.++....+.++.. ...
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~   79 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIK-RFG   79 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHH-HHS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccc-ccc
Confidence            3688998 59999999887777787678888887  333 333333   34211 11111 233344445544442 246


Q ss_pred             CccEEEEccCCh
Q 018075          251 GIDVSFDCVGFD  262 (361)
Q Consensus       251 ~~d~vld~~g~~  262 (361)
                      .+|++|.+.|..
T Consensus        80 ~ld~li~~ag~~   91 (167)
T PF00106_consen   80 PLDILINNAGIF   91 (167)
T ss_dssp             SESEEEEECSCT
T ss_pred             cccccccccccc
Confidence            799999988765

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK06500 short chain dehydrogenase; Provisional

Probab=95.87  E-value=0.28  Score=42.66  Aligned_cols=82  Identities=26%  Similarity=0.296  Sum_probs=51.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCCEE-eecC-CCccchhHHHHHHHhhcCCCcc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADET-AKVS-TDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      ++.++||.| +|.+|...++.+...|+ .|+.+++++++.+ ..++++.... +..+ .+..+.......+.+. ..++|
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id   82 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEA-FGRLD   82 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHH-hCCCC
Confidence            467899998 59999999999888999 5777877766543 3445554321 1111 1222232333333221 24799


Q ss_pred             EEEEccCC
Q 018075          254 VSFDCVGF  261 (361)
Q Consensus       254 ~vld~~g~  261 (361)
                      +++.+.|.
T Consensus        83 ~vi~~ag~   90 (249)
T PRK06500         83 AVFINAGV   90 (249)
T ss_pred             EEEECCCC
Confidence            99998874

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=95.87  E-value=0.28  Score=41.50  Aligned_cols=89  Identities=10%  Similarity=0.235  Sum_probs=51.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh-hH-HHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV-QR-LSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~-~~-~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      .|.+|||+|+|.+|...+..+...|+ .|.+++... +. .+++.+ +.   +.+...  .+...       .-.++|+|
T Consensus         9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~-~~---i~~~~~--~~~~~-------~l~~adlV   74 (202)
T PRK06718          9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEE-GK---IRWKQK--EFEPS-------DIVDAFLV   74 (202)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhC-CC---EEEEec--CCChh-------hcCCceEE
Confidence            57899999999999999988888998 455554332 11 223322 21   111111  11110       12579999


Q ss_pred             EEccCChHHHHHHHHhhcCCCEEEEE
Q 018075          256 FDCVGFDKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       256 ld~~g~~~~~~~~~~~l~~~G~~v~~  281 (361)
                      |-+++.+ ..+..+......+.++-+
T Consensus        75 iaaT~d~-elN~~i~~~a~~~~lvn~   99 (202)
T PRK06718         75 IAATNDP-RVNEQVKEDLPENALFNV   99 (202)
T ss_pred             EEcCCCH-HHHHHHHHHHHhCCcEEE
Confidence            9999988 444444444444555544

>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals

Probab=95.86  E-value=0.055  Score=39.09  Aligned_cols=85  Identities=22%  Similarity=0.371  Sum_probs=55.1

Q ss_pred             EECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCE---EeecCCCccchhHHHHHHHhhcCCCccEEEEccC
Q 018075          184 IMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE---TAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG  260 (361)
Q Consensus       184 I~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  260 (361)
                      -+|+| .|..+..+++. +...+++++.+++..+.+++.....   ...  .+..++.     +   ....||+|+....
T Consensus         2 diG~G-~G~~~~~l~~~-~~~~v~~~D~~~~~~~~~~~~~~~~~~~~~~--~d~~~l~-----~---~~~sfD~v~~~~~   69 (95)
T PF08241_consen    2 DIGCG-TGRFAAALAKR-GGASVTGIDISEEMLEQARKRLKNEGVSFRQ--GDAEDLP-----F---PDNSFDVVFSNSV   69 (95)
T ss_dssp             EET-T-TSHHHHHHHHT-TTCEEEEEES-HHHHHHHHHHTTTSTEEEEE--SBTTSSS-----S----TT-EEEEEEESH
T ss_pred             EecCc-CCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHhcccccCchhee--ehHHhCc-----c---ccccccccccccc
Confidence            45777 48889999988 4448999999999888888865432   222  1111110     1   2467999987432


Q ss_pred             C------hHHHHHHHHhhcCCCEEEE
Q 018075          261 F------DKTMSTALNATRPGGKVCL  280 (361)
Q Consensus       261 ~------~~~~~~~~~~l~~~G~~v~  280 (361)
                      -      ...++++.+.|+|+|+++.
T Consensus        70 ~~~~~~~~~~l~e~~rvLk~gG~l~~   95 (95)
T PF08241_consen   70 LHHLEDPEAALREIYRVLKPGGRLVI   95 (95)
T ss_dssp             GGGSSHHHHHHHHHHHHEEEEEEEEE
T ss_pred             eeeccCHHHHHHHHHHHcCcCeEEeC
Confidence            1      1467889999999999874

The reaction is catalyzed by methyltransferases (Mtases) and modifies DNA, RNA, proteins and small molecules, such as catechol for regulatory purposes. The various aspects of the role of DNA methylation in prokaryotic restriction-modification systems and in a number of cellular processes in eukaryotes including gene regulation and differentiation is well documented. This entry represents a methyltransferase domain found in a large variety of SAM-dependent methyltransferases including, but not limited to: Arsenite methyltransferase (2.1.1.137 from EC) which converts arsenical compounds to their methylated forms [] Biotin synthesis protein bioC, which is involved in the early stages of biotin biosyntheis [] Arginine N-methyltransferase 1, an arginine-methylating enzyme which acts on residues present in a glycine and argine-rich domain and can methylate histones [] Hexaprenyldihydroxybenzoate methyltransferase (2.1.1.114 from EC), a mitochodrial enzyme involved in ubiquinone biosynthesis [] A probable cobalt-precorrin-6Y C(15)-methyltransferase thought to be involved in adenosylcobalamin biosynthesis [] Sterol 24-C-methyltransferase (2.1.1.41 from EC), shown to participate in ergosterol biosynthesis [] 3-demethylubiquinone-9 3-methyltransferase (2.1.1.64 from EC) involved in ubiquinone biosynthesis [] Structural studies show that this domain forms the Rossman-like alpha-beta fold typical of SAM-dependent methyltransferases [, , ]. ; GO: 0008168 methyltransferase activity, 0008152 metabolic process; PDB: 3CGG_B 3CCF_B 3BKW_B 2PXX_A 3I9F_A 2YQZ_B 2YR0_A 3BUS_A 3EGE_A 3G5L_B ....

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=95.86  E-value=0.035  Score=49.35  Aligned_cols=48  Identities=23%  Similarity=0.283  Sum_probs=40.1

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcC
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLG  223 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg  223 (361)
                      ..+|++++|+|+|+.+.+++.-++..|+.+++++.++.+|.+.+ +.++
T Consensus       123 ~~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~  171 (283)
T COG0169         123 DVTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFG  171 (283)
T ss_pred             ccCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence            34689999999999999999999999988899998988876544 4454

>PRK05872 short chain dehydrogenase; Provisional

Probab=95.86  E-value=0.093  Score=47.32  Aligned_cols=81  Identities=26%  Similarity=0.367  Sum_probs=53.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCC--CEE---eecCCCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGA--DET---AKVSTDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~--~~~---~~~~~~~~~~~~~~~~~~~~~~~  250 (361)
                      +|.++||.| +|++|.++++.+...|+ .|+.++++.++.+ ..++++.  ...   .++ .+..+..+.+.++... .+
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~-~g   84 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADV-TDLAAMQAAAEEAVER-FG   84 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecC-CCHHHHHHHHHHHHHH-cC
Confidence            578999998 59999999999999999 6777878777654 4455542  111   232 2223344444444332 24


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|+++++.|.
T Consensus        85 ~id~vI~nAG~   95 (296)
T PRK05872         85 GIDVVVANAGI   95 (296)
T ss_pred             CCCEEEECCCc
Confidence            79999999885

>PRK07814 short chain dehydrogenase; Provisional

Probab=95.82  E-value=0.083  Score=46.64  Aligned_cols=82  Identities=18%  Similarity=0.244  Sum_probs=50.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHc---CCC-EEeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---GAD-ETAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~-~~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      ++.++||.| +|++|...++.+...|+ .|+.++++.++.+.+ +.+   +.. ..+..+ .+..+..+.+.++.+. -+
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   86 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEA-FG   86 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence            578999998 58999999998888999 678888877654432 222   322 111111 2222333333333322 24


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|+++++.|.
T Consensus        87 ~id~vi~~Ag~   97 (263)
T PRK07814         87 RLDIVVNNVGG   97 (263)
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.82  E-value=0.34  Score=43.11  Aligned_cols=83  Identities=24%  Similarity=0.310  Sum_probs=49.6

Q ss_pred             CCCCEEEEECC---CHHHHHHHHHHHHcCCCEEEEEeCCh---hHH-HHHHHcCCCEEeecC-CCccchhHHHHHHHhhc
Q 018075          177 GPETNVMIMGS---GPIGLVTLLAARAFGAPRIIITDVDV---QRL-SIARNLGADETAKVS-TDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       177 ~~g~~vlI~G~---g~~G~~ai~la~~~g~~~vv~v~~~~---~~~-~~~~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~  248 (361)
                      -.+.++||.|+   +++|.+.++.+...|+ .|+.+.+++   ++. ++.++++....+..+ .+.++..+.+.++.+. 
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-   85 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKK-   85 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHh-
Confidence            35788999985   5899999998888999 566665543   222 233445532222221 2233444444444332 


Q ss_pred             CCCccEEEEccCC
Q 018075          249 GSGIDVSFDCVGF  261 (361)
Q Consensus       249 ~~~~d~vld~~g~  261 (361)
                      -+++|+++++.|.
T Consensus        86 ~g~iD~lv~nAG~   98 (272)
T PRK08159         86 WGKLDFVVHAIGF   98 (272)
T ss_pred             cCCCcEEEECCcc
Confidence            2479999998863

>PRK06398 aldose dehydrogenase; Validated

Probab=95.80  E-value=0.059  Score=47.47  Aligned_cols=76  Identities=18%  Similarity=0.269  Sum_probs=48.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCE-EeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE-TAKVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      +|.++||.| +|++|.+.+..+...|+ .|+.+++++++..     .... ..+. .+..+..+.+.++.+. -+++|++
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~~~~~~D~-~~~~~i~~~~~~~~~~-~~~id~l   76 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DVDYFKVDV-SNKEQVIKGIDYVISK-YGRIDIL   76 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ceEEEEccC-CCHHHHHHHHHHHHHH-cCCCCEE
Confidence            468999998 58999999999988999 5777766654321     1111 1122 2223444444444332 2469999


Q ss_pred             EEccCC
Q 018075          256 FDCVGF  261 (361)
Q Consensus       256 ld~~g~  261 (361)
                      +++.|.
T Consensus        77 i~~Ag~   82 (258)
T PRK06398         77 VNNAGI   82 (258)
T ss_pred             EECCCC
Confidence            998874

>PRK09186 flagellin modification protein A; Provisional

Probab=95.79  E-value=0.23  Score=43.38  Aligned_cols=80  Identities=24%  Similarity=0.368  Sum_probs=50.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHc----CCCE----EeecCCCccchhHHHHHHHhh
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNL----GADE----TAKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~l----g~~~----~~~~~~~~~~~~~~~~~~~~~  247 (361)
                      ++.++||.| +|.+|...+..+...|+ .|+.+.++.++.+ .++++    +...    ..+. .+..++.+.+.++...
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl-~d~~~~~~~~~~~~~~   80 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDI-TDQESLEEFLSKSAEK   80 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecC-CCHHHHHHHHHHHHHH
Confidence            578899998 58999999998888999 5777777766543 33333    2211    1122 2223344444444322


Q ss_pred             cCCCccEEEEccC
Q 018075          248 MGSGIDVSFDCVG  260 (361)
Q Consensus       248 ~~~~~d~vld~~g  260 (361)
                       -.++|+++++.+
T Consensus        81 -~~~id~vi~~A~   92 (256)
T PRK09186         81 -YGKIDGAVNCAY   92 (256)
T ss_pred             -cCCccEEEECCc
Confidence             246999999875

>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]

Probab=95.79  E-value=0.34  Score=43.52  Aligned_cols=56  Identities=25%  Similarity=0.309  Sum_probs=46.0

Q ss_pred             HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEe---CChhHHHHHHHcCCCEEe
Q 018075          172 RRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITD---VDVQRLSIARNLGADETA  228 (361)
Q Consensus       172 ~~~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~---~~~~~~~~~~~lg~~~~~  228 (361)
                      ..+.++||.++||=. +|.+|...+.+++..|.+ ++.+-   .+.+|...++.||+..+.
T Consensus        96 ~~G~i~pg~stliEpTSGNtGigLA~~~a~~Gyk-~i~tmP~~ms~Ek~~~l~a~Gaeii~  155 (362)
T KOG1252|consen   96 KKGLITPGKSTLIEPTSGNTGIGLAYMAALRGYK-CIITMPEKMSKEKRILLRALGAEIIL  155 (362)
T ss_pred             HcCCccCCceEEEecCCCchHHHHHHHHHHcCce-EEEEechhhhHHHHHHHHHcCCEEEe
Confidence            347899999999998 699999999999999994 55553   356889999999987654

>PTZ00146 fibrillarin; Provisional

Probab=95.79  E-value=0.14  Score=45.63  Aligned_cols=107  Identities=12%  Similarity=0.142  Sum_probs=64.9

Q ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEeCChhHH-HHHHHcC-CCEEeecCCCccchhHHHHHHH
Q 018075          169 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRL-SIARNLG-ADETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       169 ~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~-~~vv~v~~~~~~~-~~~~~lg-~~~~~~~~~~~~~~~~~~~~~~  245 (361)
                      ..+....+++|++||=+|||+ |..+..+++..|- ..|++++.+++.. ++++... ...+..+..+.... ...+.+ 
T Consensus       123 ~g~~~l~IkpG~~VLDLGaG~-G~~t~~lAdiVG~~G~VyAVD~s~r~~~dLl~~ak~r~NI~~I~~Da~~p-~~y~~~-  199 (293)
T PTZ00146        123 GGVANIPIKPGSKVLYLGAAS-GTTVSHVSDLVGPEGVVYAVEFSHRSGRDLTNMAKKRPNIVPIIEDARYP-QKYRML-  199 (293)
T ss_pred             CCcceeccCCCCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCCEEEECCccCh-hhhhcc-
Confidence            345667899999999999877 7788888988863 3699999886532 2222211 11221111211111 111111 


Q ss_pred             hhcCCCccEEEEccCChH----HHHHHHHhhcCCCEEEEE
Q 018075          246 NAMGSGIDVSFDCVGFDK----TMSTALNATRPGGKVCLI  281 (361)
Q Consensus       246 ~~~~~~~d~vld~~g~~~----~~~~~~~~l~~~G~~v~~  281 (361)
                         ...+|+||-.+..+.    ....+.+.|+++|++++.
T Consensus       200 ---~~~vDvV~~Dva~pdq~~il~~na~r~LKpGG~~vI~  236 (293)
T PTZ00146        200 ---VPMVDVIFADVAQPDQARIVALNAQYFLKNGGHFIIS  236 (293)
T ss_pred             ---cCCCCEEEEeCCCcchHHHHHHHHHHhccCCCEEEEE
Confidence               236999998665443    234567799999999883

>PLN03139 formate dehydrogenase; Provisional

Probab=95.79  E-value=0.17  Score=47.19  Aligned_cols=92  Identities=17%  Similarity=0.212  Sum_probs=63.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      .|.+|.|+|.|.+|...++.++.+|+ .|++.+++....+..++.|+...       .++.+.+        ...|+|+-
T Consensus       198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g~~~~-------~~l~ell--------~~sDvV~l  261 (386)
T PLN03139        198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETGAKFE-------EDLDAML--------PKCDVVVI  261 (386)
T ss_pred             CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcCceec-------CCHHHHH--------hhCCEEEE
Confidence            57899999999999999999999999 57888876544455555564321       1232222        35789988


Q ss_pred             ccCChHHH-----HHHHHhhcCCCEEEEEccCC
Q 018075          258 CVGFDKTM-----STALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       258 ~~g~~~~~-----~~~~~~l~~~G~~v~~g~~~  285 (361)
                      +.......     ...+..|+++..+|-++...
T Consensus       262 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~  294 (386)
T PLN03139        262 NTPLTEKTRGMFNKERIAKMKKGVLIVNNARGA  294 (386)
T ss_pred             eCCCCHHHHHHhCHHHHhhCCCCeEEEECCCCc
Confidence            77644333     34667889998887776544

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=95.77  E-value=0.098  Score=43.62  Aligned_cols=82  Identities=21%  Similarity=0.299  Sum_probs=54.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCC---CEEeecCCCccchhHHHHHHHhhcCCCcc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA---DETAKVSTDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      .|.+|||.| ++++|++.++-...+|- .||.+.+++++++.++....   ..+.+.. +..+..+.+..+.+ .-...+
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~-d~~~~~~lvewLkk-~~P~lN   80 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVA-DRDSRRELVEWLKK-EYPNLN   80 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeeccc-chhhHHHHHHHHHh-hCCchh
Confidence            478999997 78999999998888888 68888899999988877542   2233321 21222222222222 224688


Q ss_pred             EEEEccCCh
Q 018075          254 VSFDCVGFD  262 (361)
Q Consensus       254 ~vld~~g~~  262 (361)
                      +++++.|-.
T Consensus        81 vliNNAGIq   89 (245)
T COG3967          81 VLINNAGIQ   89 (245)
T ss_pred             eeeeccccc
Confidence            999888743

>TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating)

Probab=95.75  E-value=0.15  Score=45.47  Aligned_cols=89  Identities=28%  Similarity=0.335  Sum_probs=58.4

Q ss_pred             EEEEECCCHHHHHH-HHHHHHcCCCEEEEEeCChhH--HHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          181 NVMIMGSGPIGLVT-LLAARAFGAPRIIITDVDVQR--LSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       181 ~vlI~G~g~~G~~a-i~la~~~g~~~vv~v~~~~~~--~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      ++.|+|+|.+|... ..+.+..+++.+..++.++++  .+.++++|.....      .+....+.      ...+|+|++
T Consensus         3 rVAIIG~G~IG~~h~~~ll~~~~~elvaV~d~d~es~~la~A~~~Gi~~~~------~~~e~ll~------~~dIDaV~i   70 (285)
T TIGR03215         3 KVAIIGSGNIGTDLMYKLLRSEHLEMVAMVGIDPESDGLARARELGVKTSA------EGVDGLLA------NPDIDIVFD   70 (285)
T ss_pred             EEEEEeCcHHHHHHHHHHHhCCCcEEEEEEeCCcccHHHHHHHHCCCCEEE------CCHHHHhc------CCCCCEEEE
Confidence            68899999999754 566666677544445555543  4577788865322      12222221      247999999


Q ss_pred             ccCChHHHHHHHHhhcCCCEEEEE
Q 018075          258 CVGFDKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       258 ~~g~~~~~~~~~~~l~~~G~~v~~  281 (361)
                      +++...+.+.....+..|-+++..
T Consensus        71 aTp~~~H~e~a~~al~aGk~VIde   94 (285)
T TIGR03215        71 ATSAKAHARHARLLAELGKIVIDL   94 (285)
T ss_pred             CCCcHHHHHHHHHHHHcCCEEEEC
Confidence            999887777777777776665543

Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc.

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=95.74  E-value=0.093  Score=46.26  Aligned_cols=80  Identities=21%  Similarity=0.235  Sum_probs=50.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH-cCCCE-Ee--ecCCCccchhHHHHHHHhhcCCCc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADE-TA--KVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      ++.++||.| +|++|.+.++.+...|+ .|+.++++.++.+.+.+ .+... .+  +. .+..+..+.+.++.+. -+++
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~g~i   80 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDV-RSLDDHKEAVARCVAA-FGKI   80 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEecc-CCHHHHHHHHHHHHHH-hCCC
Confidence            478999998 58999999998888999 57778787766554443 23211 11  22 1222333444443322 2478


Q ss_pred             cEEEEccC
Q 018075          253 DVSFDCVG  260 (361)
Q Consensus       253 d~vld~~g  260 (361)
                      |+++++.|
T Consensus        81 d~li~~Ag   88 (262)
T TIGR03325        81 DCLIPNAG   88 (262)
T ss_pred             CEEEECCC
Confidence            99999886

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK06841 short chain dehydrogenase; Provisional

Probab=95.74  E-value=0.086  Score=46.18  Aligned_cols=82  Identities=21%  Similarity=0.251  Sum_probs=52.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCE--EeecC-CCccchhHHHHHHHhhcCCCcc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE--TAKVS-TDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      ++.++||.| +|++|...++.+...|+ .|+.++++.+..+.+.++....  .+..+ .+.++......++.+. ..++|
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~~d   91 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISA-FGRID   91 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHH-hCCCC
Confidence            467999998 59999999998888999 5788888776655555543221  12211 1222333333333322 24799


Q ss_pred             EEEEccCC
Q 018075          254 VSFDCVGF  261 (361)
Q Consensus       254 ~vld~~g~  261 (361)
                      +++.+.|.
T Consensus        92 ~vi~~ag~   99 (255)
T PRK06841         92 ILVNSAGV   99 (255)
T ss_pred             EEEECCCC
Confidence            99998874

>PRK13255 thiopurine S-methyltransferase; Reviewed

Probab=95.74  E-value=0.12  Score=44.44  Aligned_cols=101  Identities=13%  Similarity=0.123  Sum_probs=61.6

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcCCCEEe-------ecCC-----CccchhHH
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADETA-------KVST-----DIEDVDTD  240 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~-------~~~~-----~~~~~~~~  240 (361)
                      ..+.++.+||+.|||. |.-++-||. .|. .|++++.++...+.+ ++.+.....       .+..     ...|+.+ 
T Consensus        33 ~~~~~~~rvL~~gCG~-G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~-  108 (218)
T PRK13255         33 LALPAGSRVLVPLCGK-SLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFA-  108 (218)
T ss_pred             hCCCCCCeEEEeCCCC-hHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccC-
Confidence            3456788999999887 778888876 799 699999999877754 333322100       0000     0011111 


Q ss_pred             HHHHHhhcCCCccEEEEccC----C----hHHHHHHHHhhcCCCEEEEE
Q 018075          241 VGKIQNAMGSGIDVSFDCVG----F----DKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       241 ~~~~~~~~~~~~d~vld~~g----~----~~~~~~~~~~l~~~G~~v~~  281 (361)
                         +.......||.|+|..-    .    ...++.+.+.|+|||+++++
T Consensus       109 ---l~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~  154 (218)
T PRK13255        109 ---LTAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLV  154 (218)
T ss_pred             ---CCcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence               10001246899998542    1    13477888999999975553

>PRK10901 16S rRNA methyltransferase B; Provisional

Probab=95.73  E-value=0.23  Score=47.31  Aligned_cols=103  Identities=19%  Similarity=0.228  Sum_probs=63.4

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHh
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQN  246 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~  246 (361)
                      ....++++|++||=+|||+ |..+..+++..+...|++++.++++.+.+++    +|....+. ..   +.... ...  
T Consensus       237 ~~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~v~a~D~s~~~l~~~~~n~~~~g~~~~~~-~~---D~~~~-~~~--  308 (427)
T PRK10901        237 ATLLAPQNGERVLDACAAP-GGKTAHILELAPQAQVVALDIDAQRLERVRENLQRLGLKATVI-VG---DARDP-AQW--  308 (427)
T ss_pred             HHHcCCCCCCEEEEeCCCC-ChHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEE-Ec---Ccccc-hhh--
Confidence            3445678999999998765 5566677776643479999999988766643    45432111 11   11110 000  


Q ss_pred             hcCCCccEEEE---ccCC-------------------------hHHHHHHHHhhcCCCEEEEE
Q 018075          247 AMGSGIDVSFD---CVGF-------------------------DKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       247 ~~~~~~d~vld---~~g~-------------------------~~~~~~~~~~l~~~G~~v~~  281 (361)
                      .....||.|+-   |.+.                         ...+..+.+.|+|||+++..
T Consensus       309 ~~~~~fD~Vl~D~Pcs~~G~~~~~p~~~~~~~~~~l~~l~~~q~~iL~~a~~~LkpGG~lvys  371 (427)
T PRK10901        309 WDGQPFDRILLDAPCSATGVIRRHPDIKWLRRPEDIAALAALQSEILDALWPLLKPGGTLLYA  371 (427)
T ss_pred             cccCCCCEEEECCCCCcccccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence            01346999973   3331                         02567788899999999854

>PRK11188 rrmJ 23S rRNA methyltransferase J; Provisional

Probab=95.73  E-value=0.17  Score=43.07  Aligned_cols=98  Identities=20%  Similarity=0.271  Sum_probs=58.3

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHh-hcCCCcc
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN-AMGSGID  253 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d  253 (361)
                      +++|++||=+|||+ |..+..+++..+. ..|++++.++...    .-++. ++.  .+-.+.. .+.++.. .....+|
T Consensus        49 ~~~~~~VLDlG~Gt-G~~t~~l~~~~~~~~~V~aVDi~~~~~----~~~v~-~i~--~D~~~~~-~~~~i~~~~~~~~~D  119 (209)
T PRK11188         49 FKPGMTVVDLGAAP-GGWSQYAVTQIGDKGRVIACDILPMDP----IVGVD-FLQ--GDFRDEL-VLKALLERVGDSKVQ  119 (209)
T ss_pred             CCCCCEEEEEcccC-CHHHHHHHHHcCCCceEEEEecccccC----CCCcE-EEe--cCCCChH-HHHHHHHHhCCCCCC
Confidence            68899998899876 6666677777653 3799999876210    01221 121  2112211 1112211 2356799


Q ss_pred             EEEEcc-----CCh------------HHHHHHHHhhcCCCEEEEEc
Q 018075          254 VSFDCV-----GFD------------KTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       254 ~vld~~-----g~~------------~~~~~~~~~l~~~G~~v~~g  282 (361)
                      +|+...     |.+            ..++.+.+.|+|||+++..-
T Consensus       120 ~V~S~~~~~~~g~~~~d~~~~~~~~~~~L~~~~~~LkpGG~~vi~~  165 (209)
T PRK11188        120 VVMSDMAPNMSGTPAVDIPRAMYLVELALDMCRDVLAPGGSFVVKV  165 (209)
T ss_pred             EEecCCCCccCCChHHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence            999744     211            25677888999999998853

>PRK07831 short chain dehydrogenase; Provisional

Probab=95.70  E-value=0.11  Score=45.90  Aligned_cols=84  Identities=25%  Similarity=0.334  Sum_probs=52.2

Q ss_pred             CCCCCEEEEEC-CC-HHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH-----cCCCEE--eecC-CCccchhHHHHHHH
Q 018075          176 VGPETNVMIMG-SG-PIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-----LGADET--AKVS-TDIEDVDTDVGKIQ  245 (361)
Q Consensus       176 ~~~g~~vlI~G-~g-~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-----lg~~~~--~~~~-~~~~~~~~~~~~~~  245 (361)
                      +.++.++||.| +| ++|.+.++.+...|+ .|+.+++++++.+...+     ++...+  +..+ .+..+....+.++.
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   92 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAV   92 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            45678999998 46 899999999999999 57777777765443321     343222  1111 12223334444433


Q ss_pred             hhcCCCccEEEEccCC
Q 018075          246 NAMGSGIDVSFDCVGF  261 (361)
Q Consensus       246 ~~~~~~~d~vld~~g~  261 (361)
                      +. .+++|+++++.|.
T Consensus        93 ~~-~g~id~li~~ag~  107 (262)
T PRK07831         93 ER-LGRLDVLVNNAGL  107 (262)
T ss_pred             HH-cCCCCEEEECCCC
Confidence            22 2479999999984

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=95.69  E-value=0.17  Score=43.25  Aligned_cols=35  Identities=26%  Similarity=0.369  Sum_probs=31.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  212 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~  212 (361)
                      +..+|+|+|+|++|...++.+...|...+..+|.+
T Consensus        27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            45789999999999999999999999888888876

>PRK06180 short chain dehydrogenase; Provisional

Probab=95.68  E-value=0.087  Score=46.92  Aligned_cols=82  Identities=24%  Similarity=0.248  Sum_probs=51.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCE--EeecC-CCccchhHHHHHHHhhcCCCcc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE--TAKVS-TDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|++++++.++.+.+.+.....  .+..+ .+.++....+.++.+. -+++|
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~-~~~~d   80 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEAT-FGPID   80 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHH-hCCCC
Confidence            357899998 59999999998888899 6888888887766554432211  11111 1222333333333221 24699


Q ss_pred             EEEEccCC
Q 018075          254 VSFDCVGF  261 (361)
Q Consensus       254 ~vld~~g~  261 (361)
                      +++++.|.
T Consensus        81 ~vv~~ag~   88 (277)
T PRK06180         81 VLVNNAGY   88 (277)
T ss_pred             EEEECCCc
Confidence            99999875

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.67  E-value=0.18  Score=43.98  Aligned_cols=35  Identities=26%  Similarity=0.408  Sum_probs=30.5

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075          179 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  213 (361)
Q Consensus       179 g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~  213 (361)
                      +.+|+|.|+|++|..+++.+...|...+..+|.+.
T Consensus        24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~   58 (240)
T TIGR02355        24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDT   58 (240)
T ss_pred             CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence            47899999999999999999999998888887543

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=95.67  E-value=0.14  Score=42.30  Aligned_cols=33  Identities=27%  Similarity=0.377  Sum_probs=29.1

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075          181 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  213 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~  213 (361)
                      +|+|+|+|++|...++.+...|...+..+|.+.
T Consensus         1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            589999999999999998889998888888765

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=95.67  E-value=0.19  Score=42.56  Aligned_cols=88  Identities=19%  Similarity=0.201  Sum_probs=56.2

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      -.|.+++|+|.|.+|..+++.+...|+ .|++.+.+.++.+.+ +.+++..+ .  .  +       ++.   ...+|++
T Consensus        26 l~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~~~v-~--~--~-------~l~---~~~~Dv~   89 (200)
T cd01075          26 LEGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGATVV-A--P--E-------EIY---SVDADVF   89 (200)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCEEE-c--c--h-------hhc---cccCCEE
Confidence            367899999999999999999999999 677888888776554 44464321 1  1  1       111   2357888


Q ss_pred             EEccCChHHHHHHHHhhcCCCEEEEEc
Q 018075          256 FDCVGFDKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       256 ld~~g~~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      +-|..........++.|+  ++++.-+
T Consensus        90 vp~A~~~~I~~~~~~~l~--~~~v~~~  114 (200)
T cd01075          90 APCALGGVINDDTIPQLK--AKAIAGA  114 (200)
T ss_pred             EecccccccCHHHHHHcC--CCEEEEC
Confidence            865433324444455554  3444433

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=95.66  E-value=0.091  Score=46.35  Aligned_cols=82  Identities=21%  Similarity=0.246  Sum_probs=52.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHH-HcCCC-EEeecC-CCccchhHHHHHHHhhcCCCcc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGAD-ETAKVS-TDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      ++.++||.| +|++|...++.+...|+ .|+.+++++++.+.+. +++.. ..+..+ .+..+....+.++.+. -+++|
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~id   82 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDA-FGKLD   82 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHh-cCCCC
Confidence            568899998 58999999998888999 5777888777665443 34321 111111 2223344444444332 24799


Q ss_pred             EEEEccCC
Q 018075          254 VSFDCVGF  261 (361)
Q Consensus       254 ~vld~~g~  261 (361)
                      +++++.|.
T Consensus        83 ~li~~ag~   90 (263)
T PRK06200         83 CFVGNAGI   90 (263)
T ss_pred             EEEECCCC
Confidence            99998873

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=95.66  E-value=0.14  Score=47.86  Aligned_cols=73  Identities=19%  Similarity=0.370  Sum_probs=55.7

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHH-HHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRL-SIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~-~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      -.+.++||+|+|-+|..++..+...|...++.+.+..+|. ++++++|+..+ .+       .+...-+     ..+|+|
T Consensus       176 L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~-~l-------~el~~~l-----~~~DvV  242 (414)
T COG0373         176 LKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV-AL-------EELLEAL-----AEADVV  242 (414)
T ss_pred             cccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee-cH-------HHHHHhh-----hhCCEE
Confidence            5789999999999999999999999987888888877765 57888995432 11       1111112     469999


Q ss_pred             EEccCCh
Q 018075          256 FDCVGFD  262 (361)
Q Consensus       256 ld~~g~~  262 (361)
                      |.+++.+
T Consensus       243 issTsa~  249 (414)
T COG0373         243 ISSTSAP  249 (414)
T ss_pred             EEecCCC
Confidence            9998877

>PRK06484 short chain dehydrogenase; Validated

Probab=95.66  E-value=0.31  Score=47.70  Aligned_cols=106  Identities=24%  Similarity=0.305  Sum_probs=67.1

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcCCCE-EeecC-CCccchhHHHHHHHhhcCCCc
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      ..|.++||.| ++++|.+.++.+...|+ .|+.++++.++.+.+ ++++... .+..+ .+..+....+.++.+. -+.+
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~i  344 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQAR-WGRL  344 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHH-cCCC
Confidence            3578889998 59999999998888999 678888877766544 3355332 12111 2223344444444332 2479


Q ss_pred             cEEEEccCCh--------------------------HHHHHHHHhhcCCCEEEEEccC
Q 018075          253 DVSFDCVGFD--------------------------KTMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       253 d~vld~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      |+++++.|..                          ...+.+++.+..+|+++.++..
T Consensus       345 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~  402 (520)
T PRK06484        345 DVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSI  402 (520)
T ss_pred             CEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECch
Confidence            9999988742                          0233445566677999988754

>KOG2017 consensus Molybdopterin synthase sulfurylase [Coenzyme transport and metabolism]

Probab=95.65  E-value=0.034  Score=49.79  Aligned_cols=34  Identities=26%  Similarity=0.413  Sum_probs=28.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeC
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDV  211 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~  211 (361)
                      +..+|||+|+|++|.-|+|++.+.|..++=.+|.
T Consensus        65 k~s~VLVVGaGGLGcPa~~YLaaaGvG~lGiVD~   98 (427)
T KOG2017|consen   65 KNSSVLVVGAGGLGCPAAQYLAAAGVGRLGIVDY   98 (427)
T ss_pred             CCccEEEEccCCCCCHHHHHHHHcCCCeeccccc
Confidence            5689999999999999999999999876555543

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=95.62  E-value=0.31  Score=42.79  Aligned_cols=80  Identities=28%  Similarity=0.343  Sum_probs=50.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc---CCCE---EeecCCCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL---GADE---TAKVSTDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l---g~~~---~~~~~~~~~~~~~~~~~~~~~~~~  250 (361)
                      ++.++||.| +|++|.+.++.+...|+ .|+.+++++...+..+++   +.+.   ..++ .+..+....+.++... -.
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~~   83 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADL-ETYAGAQAAMAAAVEA-FG   83 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeC-CCHHHHHHHHHHHHHH-cC
Confidence            467899998 59999999998888999 577777765443444433   3221   1222 2223334444444332 24


Q ss_pred             CccEEEEccC
Q 018075          251 GIDVSFDCVG  260 (361)
Q Consensus       251 ~~d~vld~~g  260 (361)
                      ++|+++++.|
T Consensus        84 ~id~lv~nAg   93 (260)
T PRK12823         84 RIDVLINNVG   93 (260)
T ss_pred             CCeEEEECCc
Confidence            7999999887

>PRK00536 speE spermidine synthase; Provisional

Probab=95.60  E-value=0.079  Score=46.59  Aligned_cols=99  Identities=6%  Similarity=-0.136  Sum_probs=64.4

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  256 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  256 (361)
                      ...++|||+|+|- |-++-.++|.-.  .|+.++-+++-.++++++-...-..++...-.+...   +.+.....+|+||
T Consensus        71 ~~pk~VLIiGGGD-Gg~~REvLkh~~--~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv~l~~~---~~~~~~~~fDVII  144 (262)
T PRK00536         71 KELKEVLIVDGFD-LELAHQLFKYDT--HVDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQ---LLDLDIKKYDLII  144 (262)
T ss_pred             CCCCeEEEEcCCc-hHHHHHHHCcCC--eeEEEECCHHHHHHHHHHCHHHHHhhcCCCEEEeeh---hhhccCCcCCEEE
Confidence            4459999998776 667788888763  799999999988888883211000011110111111   1121235799986


Q ss_pred             E-ccCChHHHHHHHHhhcCCCEEEEE
Q 018075          257 D-CVGFDKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       257 d-~~g~~~~~~~~~~~l~~~G~~v~~  281 (361)
                      - +...++..+.+.+.|+++|.++.-
T Consensus       145 vDs~~~~~fy~~~~~~L~~~Gi~v~Q  170 (262)
T PRK00536        145 CLQEPDIHKIDGLKRMLKEDGVFISV  170 (262)
T ss_pred             EcCCCChHHHHHHHHhcCCCcEEEEC
Confidence            4 466677788999999999988864

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.60  E-value=0.17  Score=44.04  Aligned_cols=81  Identities=21%  Similarity=0.313  Sum_probs=50.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH----HHcCCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      ++.++||.| +|++|..+++.+...|+ +|+.++++.++.+.+    ++.+... .+..+ .+..+..+.+..+... ..
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   81 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAED-FG   81 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence            578999998 59999999998888998 678888877654332    2234321 12222 1222333334333321 24


Q ss_pred             CccEEEEccC
Q 018075          251 GIDVSFDCVG  260 (361)
Q Consensus       251 ~~d~vld~~g  260 (361)
                      ++|.+|.+.|
T Consensus        82 ~id~vi~~ag   91 (253)
T PRK08217         82 QLNGLINNAG   91 (253)
T ss_pred             CCCEEEECCC
Confidence            7899999887

>PRK14902 16S rRNA methyltransferase B; Provisional

Probab=95.58  E-value=0.24  Score=47.45  Aligned_cols=101  Identities=16%  Similarity=0.252  Sum_probs=63.2

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEeCChhHHHHHH----HcCCCEEeecCCCccchhHHHHHHHhh
Q 018075          173 RANVGPETNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIAR----NLGADETAKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       173 ~~~~~~g~~vlI~G~g~~G~~ai~la~~~-g~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~~  247 (361)
                      ..++++|++||=+|+|+ |..++.+++.. +...+++++.++++.+.++    ++|...+.....   +..+....+   
T Consensus       245 ~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~~v~avDi~~~~l~~~~~n~~~~g~~~v~~~~~---D~~~~~~~~---  317 (444)
T PRK14902        245 ALDPKGGDTVLDACAAP-GGKTTHIAELLKNTGKVVALDIHEHKLKLIEENAKRLGLTNIETKAL---DARKVHEKF---  317 (444)
T ss_pred             HhCCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeC---Ccccccchh---
Confidence            35678999999888765 55566667665 2337999999998876654    356554322222   221111111   


Q ss_pred             cCCCccEEEE---ccCCh-------------------------HHHHHHHHhhcCCCEEEEE
Q 018075          248 MGSGIDVSFD---CVGFD-------------------------KTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       248 ~~~~~d~vld---~~g~~-------------------------~~~~~~~~~l~~~G~~v~~  281 (361)
                       ...||.|+-   |+|..                         ..+..+++.|+|||+++..
T Consensus       318 -~~~fD~Vl~D~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvys  378 (444)
T PRK14902        318 -AEKFDKILVDAPCSGLGVIRRKPDIKYNKTKEDIESLQEIQLEILESVAQYLKKGGILVYS  378 (444)
T ss_pred             -cccCCEEEEcCCCCCCeeeccCcchhhcCCHHHHHHHHHHHHHHHHHHHHHcCCCCEEEEE
Confidence             256999975   33321                         2467788899999999853

>PRK13243 glyoxylate reductase; Reviewed

Probab=95.57  E-value=0.3  Score=44.90  Aligned_cols=90  Identities=21%  Similarity=0.247  Sum_probs=62.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      .|.+|.|+|.|.+|...++.++.+|. .|++.+++.+.. ...+++...        .++.+.+        ...|+|+-
T Consensus       149 ~gktvgIiG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~-~~~~~~~~~--------~~l~ell--------~~aDiV~l  210 (333)
T PRK13243        149 YGKTIGIIGFGRIGQAVARRAKGFGM-RILYYSRTRKPE-AEKELGAEY--------RPLEELL--------RESDFVSL  210 (333)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCChh-hHHHcCCEe--------cCHHHHH--------hhCCEEEE
Confidence            57899999999999999999999999 688887765433 233444321        1222222        35799998


Q ss_pred             ccCChHHH-----HHHHHhhcCCCEEEEEccCC
Q 018075          258 CVGFDKTM-----STALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       258 ~~g~~~~~-----~~~~~~l~~~G~~v~~g~~~  285 (361)
                      ++......     ...+..|+++..++-++...
T Consensus       211 ~lP~t~~T~~~i~~~~~~~mk~ga~lIN~aRg~  243 (333)
T PRK13243        211 HVPLTKETYHMINEERLKLMKPTAILVNTARGK  243 (333)
T ss_pred             eCCCChHHhhccCHHHHhcCCCCeEEEECcCch
Confidence            88754322     35678899999888776544

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=95.57  E-value=0.18  Score=46.37  Aligned_cols=35  Identities=29%  Similarity=0.486  Sum_probs=31.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  212 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~  212 (361)
                      ...+|+|+|+|++|..+++.+...|...+..+|.+
T Consensus        23 ~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D   57 (339)
T PRK07688         23 REKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD   57 (339)
T ss_pred             cCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            45789999999999999999999999889999875

>PRK08300 acetaldehyde dehydrogenase; Validated

Probab=95.57  E-value=0.17  Score=45.30  Aligned_cols=94  Identities=24%  Similarity=0.283  Sum_probs=58.4

Q ss_pred             CEEEEECCCHHHHH-HHHHHHHcCCCEEEEEeCChh--HHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075          180 TNVMIMGSGPIGLV-TLLAARAFGAPRIIITDVDVQ--RLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  256 (361)
Q Consensus       180 ~~vlI~G~g~~G~~-ai~la~~~g~~~vv~v~~~~~--~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  256 (361)
                      -++.|+|+|.+|.. +..+.+.-+.+.+..++.+++  ....++++|.....      .++...+..   ..-.++|+||
T Consensus         5 lrVAIIGtG~IGt~hm~~l~~~~~velvAVvdid~es~gla~A~~~Gi~~~~------~~ie~LL~~---~~~~dIDiVf   75 (302)
T PRK08300          5 LKVAIIGSGNIGTDLMIKILRSEHLEPGAMVGIDPESDGLARARRLGVATSA------EGIDGLLAM---PEFDDIDIVF   75 (302)
T ss_pred             CeEEEEcCcHHHHHHHHHHhcCCCcEEEEEEeCChhhHHHHHHHHcCCCccc------CCHHHHHhC---cCCCCCCEEE
Confidence            47899999999986 555665556755555555554  34667778854321      122222211   0115799999


Q ss_pred             EccCChHHHHHHHHhhcCCCEEEEEc
Q 018075          257 DCVGFDKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       257 d~~g~~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ++.+...+.+.....+..|-+++...
T Consensus        76 ~AT~a~~H~e~a~~a~eaGk~VID~s  101 (302)
T PRK08300         76 DATSAGAHVRHAAKLREAGIRAIDLT  101 (302)
T ss_pred             ECCCHHHHHHHHHHHHHcCCeEEECC
Confidence            99998867666666666666555543

>PRK14904 16S rRNA methyltransferase B; Provisional

Probab=95.57  E-value=0.26  Score=47.31  Aligned_cols=102  Identities=22%  Similarity=0.302  Sum_probs=63.1

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHH----HcCCCEEeecCCCccchhHHHHHHH
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIAR----NLGADETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~  245 (361)
                      +......+|++||=+|+|+ |..+..+++.++ ...|++++.++++.+.++    ++|...+.....+..++       .
T Consensus       243 ~~~l~~~~g~~VLDlgaG~-G~kt~~la~~~~~~~~V~avD~s~~~l~~~~~~~~~~g~~~v~~~~~Da~~~-------~  314 (445)
T PRK14904        243 CLLLNPQPGSTVLDLCAAP-GGKSTFMAELMQNRGQITAVDRYPQKLEKIRSHASALGITIIETIEGDARSF-------S  314 (445)
T ss_pred             HHhcCCCCCCEEEEECCCC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhCCCeEEEEeCccccc-------c
Confidence            3445678999999998755 444445555442 237999999998876554    45655432221211111       1


Q ss_pred             hhcCCCccEEEE---ccCCh-------------------------HHHHHHHHhhcCCCEEEEEc
Q 018075          246 NAMGSGIDVSFD---CVGFD-------------------------KTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       246 ~~~~~~~d~vld---~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g  282 (361)
                        ....||.||-   |+|..                         ..+..+.+.|+|||+++..-
T Consensus       315 --~~~~fD~Vl~D~Pcsg~g~~~r~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpgG~lvyst  377 (445)
T PRK14904        315 --PEEQPDAILLDAPCTGTGVLGRRAELRWKLTPEKLAELVGLQAELLDHAASLLKPGGVLVYAT  377 (445)
T ss_pred             --cCCCCCEEEEcCCCCCcchhhcCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence              1346999984   44421                         24677888999999998643

>PRK08177 short chain dehydrogenase; Provisional

Probab=95.56  E-value=0.11  Score=44.60  Aligned_cols=78  Identities=21%  Similarity=0.240  Sum_probs=49.6

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecC-CCccchhHHHHHHHhhcCCCccEEEE
Q 018075          180 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS-TDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       180 ~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      .+++|.| +|++|...+..+...|+ .|+.+++++++.+.+++++-......+ .+.++..+....+   ...++|+++.
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~---~~~~id~vi~   77 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRL---QGQRFDLLFV   77 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHh---hcCCCCEEEE
Confidence            4689998 69999999988888899 688888877766555554322222211 1222333333333   2357999999


Q ss_pred             ccCC
Q 018075          258 CVGF  261 (361)
Q Consensus       258 ~~g~  261 (361)
                      +.|.
T Consensus        78 ~ag~   81 (225)
T PRK08177         78 NAGI   81 (225)
T ss_pred             cCcc
Confidence            8754

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=95.55  E-value=0.12  Score=46.46  Aligned_cols=56  Identities=13%  Similarity=0.208  Sum_probs=39.0

Q ss_pred             HHHHHhcCC-CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChh---H-HHHHHHcC
Q 018075          168 VHACRRANV-GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ---R-LSIARNLG  223 (361)
Q Consensus       168 ~~~l~~~~~-~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~---~-~~~~~~lg  223 (361)
                      +.+++...+ -++.++||+|+|+.+.+++..+...|+..+..+.++++   | .+++++++
T Consensus       112 ~~~l~~~~~~~~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~  172 (288)
T PRK12749        112 IRAIKESGFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVN  172 (288)
T ss_pred             HHHHHhcCCCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhh
Confidence            334544333 36679999999999998777777789888888888742   3 34445554

>PRK00216 ubiE ubiquinone/menaquinone biosynthesis methyltransferase; Reviewed

Probab=95.55  E-value=0.25  Score=42.68  Aligned_cols=107  Identities=19%  Similarity=0.321  Sum_probs=68.2

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHHHcCCC----EEeecCCCccchhHHHHHHH
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARNLGAD----ETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~lg~~----~~~~~~~~~~~~~~~~~~~~  245 (361)
                      ++....+++.+||-+|||. |..+..+++..+ ...+++++.+++..+.+++.-..    ..+.+..  .+....    .
T Consensus        44 ~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~--~d~~~~----~  116 (239)
T PRK00216         44 IKWLGVRPGDKVLDLACGT-GDLAIALAKAVGKTGEVVGLDFSEGMLAVGREKLRDLGLSGNVEFVQ--GDAEAL----P  116 (239)
T ss_pred             HHHhCCCCCCeEEEeCCCC-CHHHHHHHHHcCCCCeEEEEeCCHHHHHHHHHhhcccccccCeEEEe--cccccC----C
Confidence            3444566889999999887 888888888775 23799999999887777664211    1011100  111110    0


Q ss_pred             hhcCCCccEEEEcc------CChHHHHHHHHhhcCCCEEEEEccCC
Q 018075          246 NAMGSGIDVSFDCV------GFDKTMSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       246 ~~~~~~~d~vld~~------g~~~~~~~~~~~l~~~G~~v~~g~~~  285 (361)
                       .....+|+|+...      .....+..+.+.|+++|+++.+....
T Consensus       117 -~~~~~~D~I~~~~~l~~~~~~~~~l~~~~~~L~~gG~li~~~~~~  161 (239)
T PRK00216        117 -FPDNSFDAVTIAFGLRNVPDIDKALREMYRVLKPGGRLVILEFSK  161 (239)
T ss_pred             -CCCCCccEEEEecccccCCCHHHHHHHHHHhccCCcEEEEEEecC
Confidence             1135689987532      12346788899999999998876443

>PRK08628 short chain dehydrogenase; Provisional

Probab=95.53  E-value=0.1  Score=45.81  Aligned_cols=82  Identities=22%  Similarity=0.193  Sum_probs=50.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc---CCC-EEeecC-CCccchhHHHHHHHhhcCCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL---GAD-ETAKVS-TDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l---g~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~  251 (361)
                      +|.++||.| +|++|...++.+...|++ ++.+++++++.+..+++   +.. ..+..+ .+.++....+.++... -.+
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   83 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGAI-PVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAK-FGR   83 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCc-EEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh-cCC
Confidence            467899998 589999999888888995 66666766665444443   322 112111 1222333334443332 247


Q ss_pred             ccEEEEccCC
Q 018075          252 IDVSFDCVGF  261 (361)
Q Consensus       252 ~d~vld~~g~  261 (361)
                      +|++|.+.|.
T Consensus        84 id~vi~~ag~   93 (258)
T PRK08628         84 IDGLVNNAGV   93 (258)
T ss_pred             CCEEEECCcc
Confidence            9999999883

>PRK12335 tellurite resistance protein TehB; Provisional

Probab=95.52  E-value=0.046  Score=49.15  Aligned_cols=92  Identities=17%  Similarity=0.291  Sum_probs=58.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc----CCCEEeecCCCccchhHHHHHHHhhcCCCcc
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      ++.+||-+|||. |..+..+++ .|. .|+++|.+++..+.+++.    +...-...    .+....  .    ....+|
T Consensus       120 ~~~~vLDlGcG~-G~~~~~la~-~g~-~V~avD~s~~ai~~~~~~~~~~~l~v~~~~----~D~~~~--~----~~~~fD  186 (287)
T PRK12335        120 KPGKALDLGCGQ-GRNSLYLAL-LGF-DVTAVDINQQSLENLQEIAEKENLNIRTGL----YDINSA--S----IQEEYD  186 (287)
T ss_pred             CCCCEEEeCCCC-CHHHHHHHH-CCC-EEEEEECCHHHHHHHHHHHHHcCCceEEEE----echhcc--c----ccCCcc
Confidence            445899999876 777777776 477 799999999877665542    33111110    111110  0    135799


Q ss_pred             EEEEccC--------ChHHHHHHHHhhcCCCEEEEEc
Q 018075          254 VSFDCVG--------FDKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       254 ~vld~~g--------~~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      +|+.+.-        -+..+..+.+.|+|||.++.+.
T Consensus       187 ~I~~~~vl~~l~~~~~~~~l~~~~~~LkpgG~~l~v~  223 (287)
T PRK12335        187 FILSTVVLMFLNRERIPAIIKNMQEHTNPGGYNLIVC  223 (287)
T ss_pred             EEEEcchhhhCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence            9987532        1235777888999999976643

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=95.52  E-value=0.25  Score=43.14  Aligned_cols=82  Identities=23%  Similarity=0.391  Sum_probs=50.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHc---CCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---GADE-TAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      ++.++||.| +|.+|...++.+...|. .|+.++++.++.+.+ .++   +... .+..+ .+..+..+.+.++... ..
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~   80 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVET-FG   80 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence            467899998 69999999998888899 577777777654332 222   3221 11111 2223333444444332 24


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|++|.+.+.
T Consensus        81 ~~d~vi~~a~~   91 (258)
T PRK12429         81 GVDILVNNAGI   91 (258)
T ss_pred             CCCEEEECCCC
Confidence            79999998863

>PRK09072 short chain dehydrogenase; Provisional

Probab=95.52  E-value=0.13  Score=45.38  Aligned_cols=81  Identities=22%  Similarity=0.335  Sum_probs=49.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHH-Hc--CCC-EEeecC-CCccchhHHHHHHHhhcCCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NL--GAD-ETAKVS-TDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~l--g~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~  251 (361)
                      ++.++||.| +|++|...+..+...|+ .|+++++++++.+.+. ++  +.. ..+..+ .+..+.......+..  .++
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~--~~~   80 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARARE--MGG   80 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHh--cCC
Confidence            467899998 69999999998888999 5788888876654432 22  111 111111 112222222222322  357


Q ss_pred             ccEEEEccCC
Q 018075          252 IDVSFDCVGF  261 (361)
Q Consensus       252 ~d~vld~~g~  261 (361)
                      +|.++.+.|.
T Consensus        81 id~lv~~ag~   90 (263)
T PRK09072         81 INVLINNAGV   90 (263)
T ss_pred             CCEEEECCCC
Confidence            9999998875

>PRK05866 short chain dehydrogenase; Provisional

Probab=95.52  E-value=0.18  Score=45.48  Aligned_cols=82  Identities=20%  Similarity=0.311  Sum_probs=51.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HH---cCCC-EEeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN---LGAD-ETAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~-~~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.++++.++.+.+ ++   .+.. ..+..+ .+..+..+.+..+.+. -+
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~-~g  116 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKR-IG  116 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence            357899998 59999999998888899 678888887665433 22   2322 112111 1223333444433322 24


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|+++++.|.
T Consensus       117 ~id~li~~AG~  127 (293)
T PRK05866        117 GVDILINNAGR  127 (293)
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=95.52  E-value=0.2  Score=46.02  Aligned_cols=36  Identities=31%  Similarity=0.478  Sum_probs=31.4

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  213 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~  213 (361)
                      .+.+|+|+|+|++|..++..+...|...+..+|.+.
T Consensus        23 ~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~   58 (338)
T PRK12475         23 REKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY   58 (338)
T ss_pred             cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            457899999999999999999999998888888763

>PRK08328 hypothetical protein; Provisional

Probab=95.52  E-value=0.22  Score=43.12  Aligned_cols=35  Identities=26%  Similarity=0.410  Sum_probs=30.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  212 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~  212 (361)
                      .+.+|+|+|+|++|..+++.+...|...+..+|.+
T Consensus        26 ~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D   60 (231)
T PRK08328         26 KKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQ   60 (231)
T ss_pred             hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            45789999999999999999999999888888743

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=95.51  E-value=0.15  Score=38.05  Aligned_cols=89  Identities=13%  Similarity=0.231  Sum_probs=57.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      +|.+|||+|+|.+|..-++.+...|+ .+..++...   +..+  +.-....     ..+..        .-.++++|+.
T Consensus         6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~--~~i~~~~-----~~~~~--------~l~~~~lV~~   66 (103)
T PF13241_consen    6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSE--GLIQLIR-----REFEE--------DLDGADLVFA   66 (103)
T ss_dssp             TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHH--TSCEEEE-----SS-GG--------GCTTESEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhh--hHHHHHh-----hhHHH--------HHhhheEEEe
Confidence            57899999999999999999999999 566665554   2222  2111111     12211        1257999999


Q ss_pred             ccCChHHHHHHHHhhcCCCEEEEEccCC
Q 018075          258 CVGFDKTMSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       258 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~  285 (361)
                      +.+.+..-+.+....+..|.++-+....
T Consensus        67 at~d~~~n~~i~~~a~~~~i~vn~~D~p   94 (103)
T PF13241_consen   67 ATDDPELNEAIYADARARGILVNVVDDP   94 (103)
T ss_dssp             -SS-HHHHHHHHHHHHHTTSEEEETT-C
T ss_pred             cCCCHHHHHHHHHHHhhCCEEEEECCCc
Confidence            9998866666667777788877765433

>PRK07774 short chain dehydrogenase; Provisional

Probab=95.50  E-value=0.14  Score=44.72  Aligned_cols=82  Identities=20%  Similarity=0.339  Sum_probs=49.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHc---CCC-EEeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNL---GAD-ETAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~l---g~~-~~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      .+.++||.| +|.+|...++.+...|+ .|+.+++++++.+ ..+++   +.. ..+..+ .+..+.......+.+. ..
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~   82 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSA-FG   82 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-hC
Confidence            567899998 59999999998888898 6788877765543 22222   211 112211 1222233333333222 24


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|++|.+.|.
T Consensus        83 ~id~vi~~ag~   93 (250)
T PRK07774         83 GIDYLVNNAAI   93 (250)
T ss_pred             CCCEEEECCCC
Confidence            69999998884

>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot

Probab=95.50  E-value=0.35  Score=36.84  Aligned_cols=86  Identities=22%  Similarity=0.241  Sum_probs=59.3

Q ss_pred             EEEEECCCHHHHHHHHHHHHc--CCCEEEEEeCChhHHHH-HHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          181 NVMIMGSGPIGLVTLLAARAF--GAPRIIITDVDVQRLSI-ARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~--g~~~vv~v~~~~~~~~~-~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      ++.|+|+|..|..-..-++..  +.+.+.+++.++++.+. +++++.. .  +.    ++.+.+.      ..++|+|+-
T Consensus         2 ~v~iiG~G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~~~-~--~~----~~~~ll~------~~~~D~V~I   68 (120)
T PF01408_consen    2 RVGIIGAGSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYGIP-V--YT----DLEELLA------DEDVDAVII   68 (120)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTSE-E--ES----SHHHHHH------HTTESEEEE
T ss_pred             EEEEECCcHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhccc-c--hh----HHHHHHH------hhcCCEEEE
Confidence            588999999998887655555  45334456777766654 5667876 2  21    3333322      247999999


Q ss_pred             ccCChHHHHHHHHhhcCCCEEE
Q 018075          258 CVGFDKTMSTALNATRPGGKVC  279 (361)
Q Consensus       258 ~~g~~~~~~~~~~~l~~~G~~v  279 (361)
                      ++....+.+.+..++..|-.++
T Consensus        69 ~tp~~~h~~~~~~~l~~g~~v~   90 (120)
T PF01408_consen   69 ATPPSSHAEIAKKALEAGKHVL   90 (120)
T ss_dssp             ESSGGGHHHHHHHHHHTTSEEE
T ss_pred             ecCCcchHHHHHHHHHcCCEEE
Confidence            9998888888888888887544

GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....

>KOG1270 consensus Methyltransferases [Coenzyme transport and metabolism]

Probab=95.49  E-value=0.052  Score=46.96  Aligned_cols=97  Identities=20%  Similarity=0.267  Sum_probs=60.7

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcC-CCEEeecC--CCccchhHHHHHHHhhcCCCccEE
Q 018075          179 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG-ADETAKVS--TDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       179 g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      |.+||=.|||+ |+...-||| +|+ .|.++|.+++..+.+++-. .++..+..  ...+-....++..    ...||.|
T Consensus        90 g~~ilDvGCGg-GLLSepLAr-lga-~V~GID~s~~~V~vA~~h~~~dP~~~~~~~y~l~~~~~~~E~~----~~~fDaV  162 (282)
T KOG1270|consen   90 GMKILDVGCGG-GLLSEPLAR-LGA-QVTGIDASDDMVEVANEHKKMDPVLEGAIAYRLEYEDTDVEGL----TGKFDAV  162 (282)
T ss_pred             CceEEEeccCc-cccchhhHh-hCC-eeEeecccHHHHHHHHHhhhcCchhccccceeeehhhcchhhc----cccccee
Confidence            37788889987 888888888 678 6999999999888887642 11111100  0000001111111    3459998


Q ss_pred             EEcc------CChHHHHHHHHhhcCCCEEEEEc
Q 018075          256 FDCV------GFDKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       256 ld~~------g~~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      +..-      .-.+.++.+++.|+|+|++++.-
T Consensus       163 vcsevleHV~dp~~~l~~l~~~lkP~G~lfitt  195 (282)
T KOG1270|consen  163 VCSEVLEHVKDPQEFLNCLSALLKPNGRLFITT  195 (282)
T ss_pred             eeHHHHHHHhCHHHHHHHHHHHhCCCCceEeee
Confidence            7632      11235677889999999998754

>PLN02589 caffeoyl-CoA O-methyltransferase

Probab=95.47  E-value=0.29  Score=42.72  Aligned_cols=103  Identities=15%  Similarity=0.174  Sum_probs=68.2

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhh
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAF--GAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~--g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~  247 (361)
                      .+.....++|-+|++. |+.++.+|+.+  +. ++++++.++++.+.+++    .|..+-+.+..  ++..+.+.++...
T Consensus        75 ~~~~~ak~iLEiGT~~-GySal~la~al~~~g-~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~--G~a~e~L~~l~~~  150 (247)
T PLN02589         75 LKLINAKNTMEIGVYT-GYSLLATALALPEDG-KILAMDINRENYELGLPVIQKAGVAHKIDFRE--GPALPVLDQMIED  150 (247)
T ss_pred             HHHhCCCEEEEEeChh-hHHHHHHHhhCCCCC-EEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe--ccHHHHHHHHHhc
Confidence            4445667899999743 77888888876  34 79999999987776644    46433222222  4555666655432


Q ss_pred             c--CCCccEEEEccCCh---HHHHHHHHhhcCCCEEEE
Q 018075          248 M--GSGIDVSFDCVGFD---KTMSTALNATRPGGKVCL  280 (361)
Q Consensus       248 ~--~~~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~  280 (361)
                      +  ...||+||--....   ..++.+++.|++||.++.
T Consensus       151 ~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~GGviv~  188 (247)
T PLN02589        151 GKYHGTFDFIFVDADKDNYINYHKRLIDLVKVGGVIGY  188 (247)
T ss_pred             cccCCcccEEEecCCHHHhHHHHHHHHHhcCCCeEEEE
Confidence            1  25899998755433   356677899999998775

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=95.47  E-value=0.26  Score=41.62  Aligned_cols=35  Identities=26%  Similarity=0.432  Sum_probs=30.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  212 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~  212 (361)
                      ...+|+|.|+|++|...++.+...|...++.+|.+
T Consensus        20 ~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        20 EQATVAICGLGGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            45789999999999999999999999778888876

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK07832 short chain dehydrogenase; Provisional

Probab=95.44  E-value=0.47  Score=42.03  Aligned_cols=78  Identities=27%  Similarity=0.420  Sum_probs=47.8

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-H---HcCCCE----EeecCCCccchhHHHHHHHhhcCCC
Q 018075          181 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-R---NLGADE----TAKVSTDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       181 ~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~---~lg~~~----~~~~~~~~~~~~~~~~~~~~~~~~~  251 (361)
                      +++|.| +|++|..+++.+...|+ .|+.+++++++.+.+ +   ..+...    ..+. .+..+......++... ..+
T Consensus         2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~~~   78 (272)
T PRK07832          2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDI-SDYDAVAAFAADIHAA-HGS   78 (272)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeC-CCHHHHHHHHHHHHHh-cCC
Confidence            689998 59999999998888998 577777776654322 2   233321    1232 2222333333333322 346


Q ss_pred             ccEEEEccCC
Q 018075          252 IDVSFDCVGF  261 (361)
Q Consensus       252 ~d~vld~~g~  261 (361)
                      +|+++++.|.
T Consensus        79 id~lv~~ag~   88 (272)
T PRK07832         79 MDVVMNIAGI   88 (272)
T ss_pred             CCEEEECCCC
Confidence            9999999874

>PRK08703 short chain dehydrogenase; Provisional

Probab=95.44  E-value=0.15  Score=44.15  Aligned_cols=83  Identities=18%  Similarity=0.336  Sum_probs=51.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHc---CC-C---EEeecCC-CccchhHHHHHHHhh
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---GA-D---ETAKVST-DIEDVDTDVGKIQNA  247 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~-~---~~~~~~~-~~~~~~~~~~~~~~~  247 (361)
                      ++.+++|.| +|++|...++.+...|+ .|+.+++++++.+.+ +++   +. .   ...+... +..++.+...++...
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~   83 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA   83 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence            467999998 59999999998888899 578888887665433 222   21 1   1122211 122334444444433


Q ss_pred             cCCCccEEEEccCC
Q 018075          248 MGSGIDVSFDCVGF  261 (361)
Q Consensus       248 ~~~~~d~vld~~g~  261 (361)
                      .+..+|+++.+.|.
T Consensus        84 ~~~~id~vi~~ag~   97 (239)
T PRK08703         84 TQGKLDGIVHCAGY   97 (239)
T ss_pred             hCCCCCEEEEeccc
Confidence            33578999998884

>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]

Probab=95.44  E-value=0.51  Score=42.15  Aligned_cols=60  Identities=27%  Similarity=0.359  Sum_probs=46.4

Q ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEE--eCChhHHHHHHHcCCCEEee
Q 018075          170 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIIT--DVDVQRLSIARNLGADETAK  229 (361)
Q Consensus       170 ~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v--~~~~~~~~~~~~lg~~~~~~  229 (361)
                      +.+++.++||++|+=--+|.+|.+.+.+|+..|.+.++++  ..+.+|.++++.+|+..+..
T Consensus        53 Ae~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t  114 (300)
T COG0031          53 AEKRGLLKPGGTIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILT  114 (300)
T ss_pred             HHHcCCCCCCCEEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEc
Confidence            3445779999955443379999999999999999655555  35778999999999876654

>PLN02490 MPBQ/MSBQ methyltransferase

Probab=95.44  E-value=0.096  Score=47.98  Aligned_cols=105  Identities=22%  Similarity=0.302  Sum_probs=66.0

Q ss_pred             HHhcCC-CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcC
Q 018075          171 CRRANV-GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       171 l~~~~~-~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      ++...+ +++.+||-+|+|. |..+..+++..+...++++|.+++-.+.+++.....-+.+..  .+..    ++. ...
T Consensus       105 l~~~~l~~~~~~VLDLGcGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i~~i~--gD~e----~lp-~~~  176 (340)
T PLN02490        105 LEPADLSDRNLKVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIIE--GDAE----DLP-FPT  176 (340)
T ss_pred             HhhcccCCCCCEEEEEecCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCCeEEe--ccHH----hCC-CCC
Confidence            333333 5788999999876 777778888775457999999988777776632111011101  1211    110 013


Q ss_pred             CCccEEEEccC------ChHHHHHHHHhhcCCCEEEEEcc
Q 018075          250 SGIDVSFDCVG------FDKTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       250 ~~~d~vld~~g------~~~~~~~~~~~l~~~G~~v~~g~  283 (361)
                      ..||+|+.+..      ....++++.+.|++||+++.++.
T Consensus       177 ~sFDvVIs~~~L~~~~d~~~~L~e~~rvLkPGG~LvIi~~  216 (340)
T PLN02490        177 DYADRYVSAGSIEYWPDPQRGIKEAYRVLKIGGKACLIGP  216 (340)
T ss_pred             CceeEEEEcChhhhCCCHHHHHHHHHHhcCCCcEEEEEEe
Confidence            46999887431      12467889999999999987753

>PRK08589 short chain dehydrogenase; Validated

Probab=95.41  E-value=0.14  Score=45.44  Aligned_cols=81  Identities=21%  Similarity=0.326  Sum_probs=50.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc---CCC-EE--eecCCCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL---GAD-ET--AKVSTDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l---g~~-~~--~~~~~~~~~~~~~~~~~~~~~~~  250 (361)
                      ++.++||.| ++++|.+.++.+...|+ .|+.++++++..+.++++   +.. ..  .++ .+..+....+.++.+. -+
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~-~g   81 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDI-SDEQQVKDFASEIKEQ-FG   81 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeec-CCHHHHHHHHHHHHHH-cC
Confidence            577899998 59999999998888899 577777774333334333   321 11  222 2223344444444332 24


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|+++++.|.
T Consensus        82 ~id~li~~Ag~   92 (272)
T PRK08589         82 RVDVLFNNAGV   92 (272)
T ss_pred             CcCEEEECCCC
Confidence            69999998864

>PRK08862 short chain dehydrogenase; Provisional

Probab=95.40  E-value=0.18  Score=43.60  Aligned_cols=82  Identities=16%  Similarity=0.184  Sum_probs=51.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH----HHHcCCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI----ARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~----~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      +|.+++|.| ++++|.+.+..+...|+ .|+.+.++.++.+.    +++.+... .+..+ .+.++..+.+.++.+..+.
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR   82 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            467899998 58999999998888999 57777777765432    22334322 11111 2333444444444433233


Q ss_pred             CccEEEEccC
Q 018075          251 GIDVSFDCVG  260 (361)
Q Consensus       251 ~~d~vld~~g  260 (361)
                      .+|+++++.|
T Consensus        83 ~iD~li~nag   92 (227)
T PRK08862         83 APDVLVNNWT   92 (227)
T ss_pred             CCCEEEECCc
Confidence            7999999986

>PRK12747 short chain dehydrogenase; Provisional

Probab=95.39  E-value=0.41  Score=41.78  Aligned_cols=107  Identities=16%  Similarity=0.223  Sum_probs=60.1

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEE-eCChhHH-HHHHHc---CCCE-EeecC-CCccchhHHHHHHHhh--
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIIT-DVDVQRL-SIARNL---GADE-TAKVS-TDIEDVDTDVGKIQNA--  247 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v-~~~~~~~-~~~~~l---g~~~-~~~~~-~~~~~~~~~~~~~~~~--  247 (361)
                      .+.++||.| +|++|.+.++.+...|++ |+.+ .++.++. +...++   +... .+..+ .+..+......++.+.  
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGAL-VAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   81 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCe-EEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence            467899998 589999999988889995 5544 3443433 222222   2211 11111 1112233333333221  


Q ss_pred             ---cCCCccEEEEccCCh----------H---------------HHHHHHHhhcCCCEEEEEccCC
Q 018075          248 ---MGSGIDVSFDCVGFD----------K---------------TMSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       248 ---~~~~~d~vld~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~~  285 (361)
                         +..++|+++++.|..          +               ..+.+++.+...|+++.++...
T Consensus        82 ~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~  147 (252)
T PRK12747         82 NRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAA  147 (252)
T ss_pred             hhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcc
Confidence               124799999988732          0               2233555666779999887543

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.39  E-value=0.18  Score=44.48  Aligned_cols=82  Identities=17%  Similarity=0.254  Sum_probs=49.7

Q ss_pred             CCCEEEEECCC---HHHHHHHHHHHHcCCCEEEEEeCChhHH----HHHHHcCCCEEeecC-CCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMGSG---PIGLVTLLAARAFGAPRIIITDVDVQRL----SIARNLGADETAKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G~g---~~G~~ai~la~~~g~~~vv~v~~~~~~~----~~~~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      +|.++||.|++   ++|.+.++.+...|+ .|+.++++++..    ++.++++....+..+ .+.++..+.+.++.+. -
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~   86 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEE-W   86 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHH-c
Confidence            57889999843   899999998888999 566666664432    233344432222222 2233444444444332 2


Q ss_pred             CCccEEEEccCC
Q 018075          250 SGIDVSFDCVGF  261 (361)
Q Consensus       250 ~~~d~vld~~g~  261 (361)
                      +++|+++++.|.
T Consensus        87 g~ld~lv~nAg~   98 (258)
T PRK07533         87 GRLDFLLHSIAF   98 (258)
T ss_pred             CCCCEEEEcCcc
Confidence            479999998863

>PF13847 Methyltransf_31: Methyltransferase domain; PDB: 3T0I_B 3SVZ_B 3SXJ_A 3F4K_A 3GU3_B 2GH1_A 1R8Y_E 1R8X_B 2B3T_A 1T43_A

Probab=95.38  E-value=0.13  Score=41.31  Aligned_cols=98  Identities=19%  Similarity=0.372  Sum_probs=63.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhhcCC
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAF--GAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~--g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (361)
                      +++.+||=+|||. |.....+++..  +. .++++|.+++..+.+++    ++.+.+.-...   +..+ +.+.   -..
T Consensus         2 ~~~~~iLDlGcG~-G~~~~~l~~~~~~~~-~i~gvD~s~~~i~~a~~~~~~~~~~ni~~~~~---d~~~-l~~~---~~~   72 (152)
T PF13847_consen    2 KSNKKILDLGCGT-GRLLIQLAKELNPGA-KIIGVDISEEMIEYAKKRAKELGLDNIEFIQG---DIED-LPQE---LEE   72 (152)
T ss_dssp             TTTSEEEEET-TT-SHHHHHHHHHSTTTS-EEEEEESSHHHHHHHHHHHHHTTSTTEEEEES---BTTC-GCGC---SST
T ss_pred             CCCCEEEEecCcC-cHHHHHHHHhcCCCC-EEEEEECcHHHHHHhhcccccccccccceEEe---ehhc-cccc---cCC
Confidence            5678888899876 77777888543  45 79999999998777766    56552222212   2222 1100   015


Q ss_pred             CccEEEEcc-----CCh-HHHHHHHHhhcCCCEEEEEcc
Q 018075          251 GIDVSFDCV-----GFD-KTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       251 ~~d~vld~~-----g~~-~~~~~~~~~l~~~G~~v~~g~  283 (361)
                      .||+|+...     ... ..++.+.+.|+++|.++....
T Consensus        73 ~~D~I~~~~~l~~~~~~~~~l~~~~~~lk~~G~~i~~~~  111 (152)
T PF13847_consen   73 KFDIIISNGVLHHFPDPEKVLKNIIRLLKPGGILIISDP  111 (152)
T ss_dssp             TEEEEEEESTGGGTSHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             CeeEEEEcCchhhccCHHHHHHHHHHHcCCCcEEEEEEC
Confidence            899999863     212 367889999999999987643

...

>PRK06101 short chain dehydrogenase; Provisional

Probab=95.36  E-value=0.36  Score=41.87  Aligned_cols=41  Identities=24%  Similarity=0.246  Sum_probs=32.5

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH
Q 018075          180 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN  221 (361)
Q Consensus       180 ~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~  221 (361)
                      .++||.| +|++|...+..+...|+ .|+.+++++++.+.+.+
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~   43 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHT   43 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHH
Confidence            4688998 69999988887778899 57888888877665544

>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]

Probab=95.36  E-value=0.22  Score=44.35  Aligned_cols=95  Identities=19%  Similarity=0.216  Sum_probs=65.7

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcC------CC-EEeecCCCccchhHHHHHHHhhcCCCc
Q 018075          180 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG------AD-ETAKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       180 ~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      .+|||+|.|. |-++-.++|....++++.++-+++-.++++++-      ++ .-..+  ...|..+.+++.    ..++
T Consensus        78 k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i--~i~Dg~~~v~~~----~~~f  150 (282)
T COG0421          78 KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEI--IIDDGVEFLRDC----EEKF  150 (282)
T ss_pred             CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEE--EeccHHHHHHhC----CCcC
Confidence            5999998655 557778888888889999999999999888842      11 10010  012444444432    4589


Q ss_pred             cEEEE-ccCC---------hHHHHHHHHhhcCCCEEEEE
Q 018075          253 DVSFD-CVGF---------DKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       253 d~vld-~~g~---------~~~~~~~~~~l~~~G~~v~~  281 (361)
                      |+||- +...         .+.++.+-+.|+++|.++.-
T Consensus       151 DvIi~D~tdp~gp~~~Lft~eFy~~~~~~L~~~Gi~v~q  189 (282)
T COG0421         151 DVIIVDSTDPVGPAEALFTEEFYEGCRRALKEDGIFVAQ  189 (282)
T ss_pred             CEEEEcCCCCCCcccccCCHHHHHHHHHhcCCCcEEEEe
Confidence            99975 3322         35788899999999998876

>TIGR00537 hemK_rel_arch HemK-related putative methylase

Probab=95.36  E-value=0.13  Score=42.68  Aligned_cols=94  Identities=22%  Similarity=0.294  Sum_probs=58.4

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhhcCC
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (361)
                      ...++++||-+|+|. |..+..+++. +. .+++++.+++..+.+++    .+..... +.   .++.+.       ...
T Consensus        16 ~~~~~~~vLdlG~G~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~-~~---~d~~~~-------~~~   81 (179)
T TIGR00537        16 RELKPDDVLEIGAGT-GLVAIRLKGK-GK-CILTTDINPFAVKELRENAKLNNVGLDV-VM---TDLFKG-------VRG   81 (179)
T ss_pred             HhcCCCeEEEeCCCh-hHHHHHHHhc-CC-EEEEEECCHHHHHHHHHHHHHcCCceEE-EE---cccccc-------cCC
Confidence            345668888898766 6666666664 45 79999999988776655    2322111 11   121111       124


Q ss_pred             CccEEEEccCC---------------------------hHHHHHHHHhhcCCCEEEEEc
Q 018075          251 GIDVSFDCVGF---------------------------DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       251 ~~d~vld~~g~---------------------------~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      .+|+|+.+..-                           ...++.+.+.|+++|+++.+.
T Consensus        82 ~fD~Vi~n~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~~~~~~  140 (179)
T TIGR00537        82 KFDVILFNPPYLPLEDDLRRGDWLDVAIDGGKDGRKVIDRFLDELPEILKEGGRVQLIQ  140 (179)
T ss_pred             cccEEEECCCCCCCcchhcccchhhhhhhcCCchHHHHHHHHHhHHHhhCCCCEEEEEE
Confidence            78999865210                           124667778999999998874

The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes.

>PRK07677 short chain dehydrogenase; Provisional

Probab=95.35  E-value=0.17  Score=44.26  Aligned_cols=81  Identities=25%  Similarity=0.273  Sum_probs=50.2

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHH-H---cCCC-EEeecC-CCccchhHHHHHHHhhcCCC
Q 018075          179 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-N---LGAD-ETAKVS-TDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       179 g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~---lg~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~  251 (361)
                      |.++||.| +|++|.+.++.+...|+ .|+.++++.++.+.+. +   .+.. ..+..+ .+..+..+.+.++... -.+
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   78 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEK-FGR   78 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH-hCC
Confidence            46889998 58999999999888999 6888877776544332 2   2221 122211 2223344444444332 246


Q ss_pred             ccEEEEccCC
Q 018075          252 IDVSFDCVGF  261 (361)
Q Consensus       252 ~d~vld~~g~  261 (361)
                      +|+++++.|.
T Consensus        79 id~lI~~ag~   88 (252)
T PRK07677         79 IDALINNAAG   88 (252)
T ss_pred             ccEEEECCCC
Confidence            9999998873

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=95.34  E-value=0.4  Score=40.20  Aligned_cols=77  Identities=25%  Similarity=0.371  Sum_probs=47.4

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHc----CCCEEeecCCCccchhHHHHHHHhhcCC
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL----GADETAKVSTDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (361)
                      -++.+++|+| +|.+|..++..+...|. .++.+.++.++.+.+ +++    +.. +...+.  .+..+ +.+.    -.
T Consensus        26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~-~~~~~~--~~~~~-~~~~----~~   96 (194)
T cd01078          26 LKGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEG-VGAVET--SDDAA-RAAA----IK   96 (194)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCc-EEEeeC--CCHHH-HHHH----Hh
Confidence            3678999998 59999988888887887 677777777765433 323    222 111111  12111 1111    14


Q ss_pred             CccEEEEccCCh
Q 018075          251 GIDVSFDCVGFD  262 (361)
Q Consensus       251 ~~d~vld~~g~~  262 (361)
                      ++|+||.+....
T Consensus        97 ~~diVi~at~~g  108 (194)
T cd01078          97 GADVVFAAGAAG  108 (194)
T ss_pred             cCCEEEECCCCC
Confidence            689999988765

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates

Probab=95.34  E-value=0.35  Score=38.97  Aligned_cols=88  Identities=17%  Similarity=0.194  Sum_probs=57.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      ++.+|.|+|.|.-|.+-.+-+|-.|.+++++........+.+++-|...        .+..+.+        ...|+|+-
T Consensus         3 ~~k~IAViGyGsQG~a~AlNLrDSG~~V~Vglr~~s~s~~~A~~~Gf~v--------~~~~eAv--------~~aDvV~~   66 (165)
T PF07991_consen    3 KGKTIAVIGYGSQGHAHALNLRDSGVNVIVGLREGSASWEKAKADGFEV--------MSVAEAV--------KKADVVML   66 (165)
T ss_dssp             CTSEEEEES-SHHHHHHHHHHHHCC-EEEEEE-TTCHHHHHHHHTT-EC--------CEHHHHH--------HC-SEEEE
T ss_pred             CCCEEEEECCChHHHHHHHHHHhCCCCEEEEecCCCcCHHHHHHCCCee--------ccHHHHH--------hhCCEEEE
Confidence            5789999999999999999999999976666665555888889888643        1333333        35899998


Q ss_pred             ccCCh---HHH-HHHHHhhcCCCEEEEE
Q 018075          258 CVGFD---KTM-STALNATRPGGKVCLI  281 (361)
Q Consensus       258 ~~g~~---~~~-~~~~~~l~~~G~~v~~  281 (361)
                      .+...   ..+ +.+...|++|-.++..
T Consensus        67 L~PD~~q~~vy~~~I~p~l~~G~~L~fa   94 (165)
T PF07991_consen   67 LLPDEVQPEVYEEEIAPNLKPGATLVFA   94 (165)
T ss_dssp             -S-HHHHHHHHHHHHHHHS-TT-EEEES
T ss_pred             eCChHHHHHHHHHHHHhhCCCCCEEEeC
Confidence            88743   123 4455678888877654

This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C.

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=95.33  E-value=0.36  Score=38.27  Aligned_cols=32  Identities=28%  Similarity=0.474  Sum_probs=28.3

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075          181 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  212 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~  212 (361)
                      +|+|.|+|++|...++.+...|...+..+|.+
T Consensus         1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d   32 (143)
T cd01483           1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD   32 (143)
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence            58999999999999999999999888888754

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK11933 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF; Reviewed

Probab=95.32  E-value=0.39  Score=46.16  Aligned_cols=98  Identities=20%  Similarity=0.318  Sum_probs=63.6

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHH----HHcCCCEEeecCCCccchhHHHHHHHhhcC
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIA----RNLGADETAKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      ++++|++||=+.|++ |-=++++|..++ -..+++.+.+..|.+.+    +++|...+.....+...+..       ..+
T Consensus       110 ~~~pg~~VLD~CAAP-GgKTt~la~~l~~~g~lvA~D~~~~R~~~L~~nl~r~G~~nv~v~~~D~~~~~~-------~~~  181 (470)
T PRK11933        110 DDNAPQRVLDMAAAP-GSKTTQIAALMNNQGAIVANEYSASRVKVLHANISRCGVSNVALTHFDGRVFGA-------ALP  181 (470)
T ss_pred             CCCCCCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCchhhhhh-------hch
Confidence            679999999987655 334556666653 22689999999987554    55788775544332222111       113


Q ss_pred             CCccEEEE---ccCCh-------------------------HHHHHHHHhhcCCCEEEE
Q 018075          250 SGIDVSFD---CVGFD-------------------------KTMSTALNATRPGGKVCL  280 (361)
Q Consensus       250 ~~~d~vld---~~g~~-------------------------~~~~~~~~~l~~~G~~v~  280 (361)
                      ..||.||-   |+|..                         ..+..+++.|+|||++|-
T Consensus       182 ~~fD~ILvDaPCSG~G~~rk~p~~~~~~s~~~v~~l~~lQ~~iL~~A~~~LkpGG~LVY  240 (470)
T PRK11933        182 ETFDAILLDAPCSGEGTVRKDPDALKNWSPESNLEIAATQRELIESAFHALKPGGTLVY  240 (470)
T ss_pred             hhcCeEEEcCCCCCCcccccCHHHhhhCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEE
Confidence            46888864   66542                         356678899999998853

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.31  E-value=0.21  Score=46.33  Aligned_cols=36  Identities=31%  Similarity=0.451  Sum_probs=31.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  213 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~  213 (361)
                      ...+|||+|+|++|..+++.+...|...+..+|.+.
T Consensus        27 ~~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~   62 (355)
T PRK05597         27 FDAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT   62 (355)
T ss_pred             hCCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            457999999999999999999999999898887654

>PRK06483 dihydromonapterin reductase; Provisional

Probab=95.31  E-value=0.18  Score=43.56  Aligned_cols=80  Identities=16%  Similarity=0.193  Sum_probs=49.5

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChh-HHHHHHHcCCCEE-eecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          179 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ-RLSIARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       179 g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~-~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      +.++||.| +|++|.+.++.+...|+ .|+.++++++ ..+.+++.++..+ .++ .+..+....+.++... -.++|++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~~~id~l   78 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADF-STNAGIMAFIDELKQH-TDGLRAI   78 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCC-CCHHHHHHHHHHHHhh-CCCccEE
Confidence            46889998 58999999998888999 5666766553 3344444553321 122 2223444444444321 2469999


Q ss_pred             EEccCC
Q 018075          256 FDCVGF  261 (361)
Q Consensus       256 ld~~g~  261 (361)
                      +++.|.
T Consensus        79 v~~ag~   84 (236)
T PRK06483         79 IHNASD   84 (236)
T ss_pred             EECCcc
Confidence            998874

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=95.29  E-value=0.15  Score=40.06  Aligned_cols=97  Identities=19%  Similarity=0.311  Sum_probs=57.0

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh-------------------hHH----HHHHHcCC-CEEeecCCCc
Q 018075          179 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV-------------------QRL----SIARNLGA-DETAKVSTDI  234 (361)
Q Consensus       179 g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~-------------------~~~----~~~~~lg~-~~~~~~~~~~  234 (361)
                      ..+|+|.|+|++|..++..+...|...+..+|.+.                   .|.    +.++++.. ..+..+.   
T Consensus         2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~---   78 (135)
T PF00899_consen    2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIP---   78 (135)
T ss_dssp             T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEE---
T ss_pred             CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeee---
Confidence            46899999999999999999889998888887432                   122    23333432 2222211   


Q ss_pred             cch-hHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCC-EEEEEc
Q 018075          235 EDV-DTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGG-KVCLIG  282 (361)
Q Consensus       235 ~~~-~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G-~~v~~g  282 (361)
                      ..+ .....++.    .++|+||+|.........+.+.+...+ .++..+
T Consensus        79 ~~~~~~~~~~~~----~~~d~vi~~~d~~~~~~~l~~~~~~~~~p~i~~~  124 (135)
T PF00899_consen   79 EKIDEENIEELL----KDYDIVIDCVDSLAARLLLNEICREYGIPFIDAG  124 (135)
T ss_dssp             SHCSHHHHHHHH----HTSSEEEEESSSHHHHHHHHHHHHHTT-EEEEEE
T ss_pred             cccccccccccc----cCCCEEEEecCCHHHHHHHHHHHHHcCCCEEEEE
Confidence            122 12222222    478999999998755445555444444 344443

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK06128 oxidoreductase; Provisional

Probab=95.29  E-value=0.49  Score=42.68  Aligned_cols=105  Identities=18%  Similarity=0.197  Sum_probs=60.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChh------HHHHHHHcCCCEE-eecC-CCccchhHHHHHHHhhc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ------RLSIARNLGADET-AKVS-TDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~------~~~~~~~lg~~~~-~~~~-~~~~~~~~~~~~~~~~~  248 (361)
                      .+.++||.| +|++|.+.+..+...|++ |+.+..+.+      ..+.+++.+.... +..+ .+..+..+.+.++.+. 
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~~-V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-  131 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGAD-IALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE-  131 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCCE-EEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH-
Confidence            468999998 599999999988889994 555544322      1223333443221 1111 1222333334333322 


Q ss_pred             CCCccEEEEccCCh--------------------------HHHHHHHHhhcCCCEEEEEccC
Q 018075          249 GSGIDVSFDCVGFD--------------------------KTMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       249 ~~~~d~vld~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      -.++|+++++.|..                          ...+.+.+.+..+|+++.++..
T Consensus       132 ~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~  193 (300)
T PRK06128        132 LGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSI  193 (300)
T ss_pred             hCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCc
Confidence            24799999988741                          0233444556778899887643

>PRK06953 short chain dehydrogenase; Provisional

Probab=95.29  E-value=0.14  Score=43.78  Aligned_cols=77  Identities=31%  Similarity=0.359  Sum_probs=49.2

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEE-eecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          180 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       180 ~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      .+++|.| +|.+|...++.+...|+ .++.++++.++.+.++..+.... .+. .+..++.....++   .+.++|+++.
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~-~~~~~v~~~~~~~---~~~~~d~vi~   76 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDV-ADPASVAGLAWKL---DGEALDAAVY   76 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecC-CCHHHHHHHHHHh---cCCCCCEEEE
Confidence            4688998 69999999987777898 57778888777766665554321 222 1122222222222   2357999999


Q ss_pred             ccCC
Q 018075          258 CVGF  261 (361)
Q Consensus       258 ~~g~  261 (361)
                      +.|.
T Consensus        77 ~ag~   80 (222)
T PRK06953         77 VAGV   80 (222)
T ss_pred             CCCc
Confidence            8764

>PLN02336 phosphoethanolamine N-methyltransferase

Probab=95.26  E-value=0.081  Score=51.24  Aligned_cols=103  Identities=18%  Similarity=0.267  Sum_probs=66.9

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcC--CCEEeecCCCccchhHHHHHHHhhcC
Q 018075          172 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG--ADETAKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       172 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg--~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      +...++++++||-+|||. |..++.+++..+. .+++++.+++..+.+++..  ...-+.+..  .++..    . ....
T Consensus       260 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvDiS~~~l~~A~~~~~~~~~~v~~~~--~d~~~----~-~~~~  330 (475)
T PLN02336        260 DKLDLKPGQKVLDVGCGI-GGGDFYMAENFDV-HVVGIDLSVNMISFALERAIGRKCSVEFEV--ADCTK----K-TYPD  330 (475)
T ss_pred             HhcCCCCCCEEEEEeccC-CHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHhhcCCCceEEEE--cCccc----C-CCCC
Confidence            344567899999999876 6677788888887 7999999998887776532  111011100  11110    0 0013


Q ss_pred             CCccEEEEccC------ChHHHHHHHHhhcCCCEEEEEcc
Q 018075          250 SGIDVSFDCVG------FDKTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       250 ~~~d~vld~~g------~~~~~~~~~~~l~~~G~~v~~g~  283 (361)
                      ..||+|+....      ....++.+.+.|+|||+++....
T Consensus       331 ~~fD~I~s~~~l~h~~d~~~~l~~~~r~LkpgG~l~i~~~  370 (475)
T PLN02336        331 NSFDVIYSRDTILHIQDKPALFRSFFKWLKPGGKVLISDY  370 (475)
T ss_pred             CCEEEEEECCcccccCCHHHHHHHHHHHcCCCeEEEEEEe
Confidence            46999987321      12478889999999999987653

>PRK07024 short chain dehydrogenase; Provisional

Probab=95.26  E-value=0.18  Score=44.27  Aligned_cols=81  Identities=19%  Similarity=0.158  Sum_probs=49.4

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcCCC-EE--eecC-CCccchhHHHHHHHhhcCCCc
Q 018075          179 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGAD-ET--AKVS-TDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       179 g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~-~~--~~~~-~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      +.++||.| +|++|...+..+...|+ .|+.++++.++.+.+ +++... .+  +..+ .+..+..+.+.++... .+.+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~-~g~i   79 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAA-HGLP   79 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHh-CCCC
Confidence            46899998 69999999998888899 677788877765443 333211 11  1111 2223333333333322 2358


Q ss_pred             cEEEEccCC
Q 018075          253 DVSFDCVGF  261 (361)
Q Consensus       253 d~vld~~g~  261 (361)
                      |+++++.|.
T Consensus        80 d~lv~~ag~   88 (257)
T PRK07024         80 DVVIANAGI   88 (257)
T ss_pred             CEEEECCCc
Confidence            999998763

>PRK07825 short chain dehydrogenase; Provisional

Probab=95.24  E-value=0.17  Score=44.82  Aligned_cols=80  Identities=31%  Similarity=0.330  Sum_probs=52.0

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HHHcC-CCEE-eecCCCccchhHHHHHHHhhcCCCccE
Q 018075          179 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLG-ADET-AKVSTDIEDVDTDVGKIQNAMGSGIDV  254 (361)
Q Consensus       179 g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~  254 (361)
                      +.++||.| +|++|...++.+...|+ .|+.+++++++.+. .++++ ...+ .|+ .+.+++.+.+.++.+. -.++|+
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~~~id~   81 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDV-TDPASFAAFLDAVEAD-LGPIDV   81 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccC-CCHHHHHHHHHHHHHH-cCCCCE
Confidence            57899998 59999999998888899 57777787776543 34444 2221 122 2233444444444432 257999


Q ss_pred             EEEccCC
Q 018075          255 SFDCVGF  261 (361)
Q Consensus       255 vld~~g~  261 (361)
                      ++++.|.
T Consensus        82 li~~ag~   88 (273)
T PRK07825         82 LVNNAGV   88 (273)
T ss_pred             EEECCCc
Confidence            9999874

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.22  E-value=0.56  Score=41.27  Aligned_cols=104  Identities=18%  Similarity=0.268  Sum_probs=61.2

Q ss_pred             CCCEEEEECC---CHHHHHHHHHHHHcCCCEEEEEeCCh---hHH-HHHHHcCCCE--E--eecCCCccchhHHHHHHHh
Q 018075          178 PETNVMIMGS---GPIGLVTLLAARAFGAPRIIITDVDV---QRL-SIARNLGADE--T--AKVSTDIEDVDTDVGKIQN  246 (361)
Q Consensus       178 ~g~~vlI~G~---g~~G~~ai~la~~~g~~~vv~v~~~~---~~~-~~~~~lg~~~--~--~~~~~~~~~~~~~~~~~~~  246 (361)
                      .|.++||.|+   +++|.+.++.+...|+ .|+.+.++.   ++. ++.+++....  .  .|. .+.++....+.++.+
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~   83 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDV-TSDEEITACFETIKE   83 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCC-CCHHHHHHHHHHHHH
Confidence            4678999984   5999999998888999 466664432   233 2334442111  1  222 233444445554433


Q ss_pred             hcCCCccEEEEccCCh--------------H---------------HHHHHHHhhcCCCEEEEEccC
Q 018075          247 AMGSGIDVSFDCVGFD--------------K---------------TMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       247 ~~~~~~d~vld~~g~~--------------~---------------~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      . -+++|+++++.|..              +               ..+..++.|.++|+++.++..
T Consensus        84 ~-~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~  149 (257)
T PRK08594         84 E-VGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYL  149 (257)
T ss_pred             h-CCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEccc
Confidence            2 25799999987631              0               122345566778999888743

>PRK12937 short chain dehydrogenase; Provisional

Probab=95.21  E-value=0.57  Score=40.55  Aligned_cols=105  Identities=16%  Similarity=0.206  Sum_probs=60.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeC-ChhHHH-H---HHHcCCCE-EeecC-CCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDV-DVQRLS-I---ARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~-~~~~~~-~---~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      ++.++||.| +|++|...++.+...|++ ++.+.+ ++.+.+ .   +++.+... .+..+ .+..+..+.+.++... -
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~   81 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGFA-VAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETA-F   81 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-c
Confidence            567899998 599999999999889995 444433 332222 2   22333221 11111 2223333444443332 2


Q ss_pred             CCccEEEEccCCh----------H---------------HHHHHHHhhcCCCEEEEEccC
Q 018075          250 SGIDVSFDCVGFD----------K---------------TMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       250 ~~~d~vld~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      +++|++|.+.|..          .               ..+.+.+.+..+|+++.++..
T Consensus        82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~  141 (245)
T PRK12937         82 GRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTS  141 (245)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeec
Confidence            4799999988742          0               123444566677899988743

>PLN02396 hexaprenyldihydroxybenzoate methyltransferase

Probab=95.20  E-value=0.13  Score=46.81  Aligned_cols=96  Identities=22%  Similarity=0.232  Sum_probs=61.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcC-CC---EEeecCCCccchhHHHHHHHhhcCCCc
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG-AD---ETAKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      .+|.+||=+|||. |..+..+++ .|+ .|+++|.+++..+.+++.. ..   .-+.+..  .+..    ++.. ....|
T Consensus       130 ~~g~~ILDIGCG~-G~~s~~La~-~g~-~V~GID~s~~~i~~Ar~~~~~~~~~~~i~~~~--~dae----~l~~-~~~~F  199 (322)
T PLN02396        130 FEGLKFIDIGCGG-GLLSEPLAR-MGA-TVTGVDAVDKNVKIARLHADMDPVTSTIEYLC--TTAE----KLAD-EGRKF  199 (322)
T ss_pred             CCCCEEEEeeCCC-CHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHhcCcccceeEEe--cCHH----Hhhh-ccCCC
Confidence            5678898899876 666666665 577 6999999999888876531 11   0011111  1211    1111 23579


Q ss_pred             cEEEEcc------CChHHHHHHHHhhcCCCEEEEEc
Q 018075          253 DVSFDCV------GFDKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       253 d~vld~~------g~~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      |+|+..-      .....++.+.+.|+|||.+++.-
T Consensus       200 D~Vi~~~vLeHv~d~~~~L~~l~r~LkPGG~liist  235 (322)
T PLN02396        200 DAVLSLEVIEHVANPAEFCKSLSALTIPNGATVLST  235 (322)
T ss_pred             CEEEEhhHHHhcCCHHHHHHHHHHHcCCCcEEEEEE
Confidence            9998522      22246788889999999998763

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=95.20  E-value=0.65  Score=41.07  Aligned_cols=35  Identities=23%  Similarity=0.393  Sum_probs=30.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  212 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~  212 (361)
                      .+.+|+|+|+|++|..++..+...|...+..+|.+
T Consensus        29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D   63 (268)
T PRK15116         29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMD   63 (268)
T ss_pred             cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            56899999999999999999999998788888755

>COG0144 Sun tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis]

Probab=95.20  E-value=0.29  Score=45.38  Aligned_cols=103  Identities=21%  Similarity=0.289  Sum_probs=64.4

Q ss_pred             HhcCCCCCCEEEEECC--CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH----HHcCCCEEeecCCCccchhHHHHHHH
Q 018075          172 RRANVGPETNVMIMGS--GPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       172 ~~~~~~~g~~vlI~G~--g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~~~~~~  245 (361)
                      ...+.++|++||=+-+  |+--...+++....|. .|++.+.++.|.+.+    +.+|...+.....+...+...   ..
T Consensus       150 ~~L~p~pge~VlD~cAAPGGKTthla~~~~~~~~-iV~A~D~~~~Rl~~l~~nl~RlG~~nv~~~~~d~~~~~~~---~~  225 (355)
T COG0144         150 LVLDPKPGERVLDLCAAPGGKTTHLAELMENEGA-IVVAVDVSPKRLKRLRENLKRLGVRNVIVVNKDARRLAEL---LP  225 (355)
T ss_pred             HHcCCCCcCEEEEECCCCCCHHHHHHHhcCCCCc-eEEEEcCCHHHHHHHHHHHHHcCCCceEEEeccccccccc---cc
Confidence            4578899999999843  5544444444444455 579999999987655    558887644332221111111   10


Q ss_pred             hhcCCCccEEEE---ccCCh-------------------------HHHHHHHHhhcCCCEEEE
Q 018075          246 NAMGSGIDVSFD---CVGFD-------------------------KTMSTALNATRPGGKVCL  280 (361)
Q Consensus       246 ~~~~~~~d~vld---~~g~~-------------------------~~~~~~~~~l~~~G~~v~  280 (361)
                        .+..||.||=   |+|..                         ..+..+++.|++||+++.
T Consensus       226 --~~~~fD~iLlDaPCSg~G~irr~Pd~~~~~~~~~i~~l~~lQ~~iL~~a~~~lk~GG~LVY  286 (355)
T COG0144         226 --GGEKFDRILLDAPCSGTGVIRRDPDVKWRRTPEDIAELAKLQKEILAAALKLLKPGGVLVY  286 (355)
T ss_pred             --ccCcCcEEEECCCCCCCcccccCccccccCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEE
Confidence              1224888865   66544                         367778899999999874

>PRK06172 short chain dehydrogenase; Provisional

Probab=95.19  E-value=0.19  Score=44.00  Aligned_cols=82  Identities=23%  Similarity=0.302  Sum_probs=50.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH----HHHcCCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI----ARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~----~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      ++.++||.| +|++|...++.+...|+ .|+.+++++++.+.    +++.+... .+..+ .+..+....+.++... -+
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~g   83 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAA-YG   83 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-hC
Confidence            468999998 59999999998888898 57888787765432    23333221 11111 1222333344433332 24


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|+++.+.|.
T Consensus        84 ~id~li~~ag~   94 (253)
T PRK06172         84 RLDYAFNNAGI   94 (253)
T ss_pred             CCCEEEECCCC
Confidence            78999998874

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=95.19  E-value=0.26  Score=43.12  Aligned_cols=35  Identities=23%  Similarity=0.393  Sum_probs=30.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  212 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~  212 (361)
                      ...+|+|+|+|++|..++..+...|...+..+|.+
T Consensus        31 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D   65 (245)
T PRK05690         31 KAARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFD   65 (245)
T ss_pred             cCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            45799999999999999999999999888888643

>PRK07340 ornithine cyclodeaminase; Validated

Probab=95.17  E-value=0.18  Score=45.69  Aligned_cols=101  Identities=15%  Similarity=0.179  Sum_probs=65.2

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEEeCChhHHH-HHHHcCCCEEeecCCCccchhHHHHHHHhhcC
Q 018075          172 RRANVGPETNVMIMGSGPIGLVTLLAAR-AFGAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       172 ~~~~~~~g~~vlI~G~g~~G~~ai~la~-~~g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      +...-....+++|+|+|..|.+.+..+. ..+.+.+.+.+++.++.+ ++++++...+ ...  ..+..+.+        
T Consensus       118 ~~La~~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~-~~~--~~~~~~av--------  186 (304)
T PRK07340        118 RTLAPAPPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGP-TAE--PLDGEAIP--------  186 (304)
T ss_pred             HHhCCCCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCC-eeE--ECCHHHHh--------
Confidence            4333356689999999999988888765 468778888888887654 5555542110 000  01222222        


Q ss_pred             CCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCC
Q 018075          250 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       250 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~  285 (361)
                      .++|+|+.|..+..-+-..  .++||-++..+|...
T Consensus       187 ~~aDiVitaT~s~~Pl~~~--~~~~g~hi~~iGs~~  220 (304)
T PRK07340        187 EAVDLVVTATTSRTPVYPE--AARAGRLVVAVGAFT  220 (304)
T ss_pred             hcCCEEEEccCCCCceeCc--cCCCCCEEEecCCCC
Confidence            4799999988766322222  378999999999654

>PRK07478 short chain dehydrogenase; Provisional

Probab=95.17  E-value=0.19  Score=43.99  Aligned_cols=82  Identities=18%  Similarity=0.202  Sum_probs=50.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HH---cCCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN---LGADE-TAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      ++.++||.| +|++|...+..+...|+ .|+.+++++++.+.+ ++   .+... .+..+ .+..+..+.+.++.+. -.
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   82 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVER-FG   82 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh-cC
Confidence            467899998 58999999998888999 577777777665433 22   23221 11111 2223333344444332 24


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|+++.+.|.
T Consensus        83 ~id~li~~ag~   93 (254)
T PRK07478         83 GLDIAFNNAGT   93 (254)
T ss_pred             CCCEEEECCCC
Confidence            79999998874

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.16  E-value=0.18  Score=44.00  Aligned_cols=83  Identities=20%  Similarity=0.233  Sum_probs=48.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCCE-EeecC-CCccchhHHHHHHHhhcCCCcc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      .+.++||.| +|.+|...+..+...|++.++...++.++.+ +..+++... .+..+ .+..+..+.+.++.+..+.++|
T Consensus         4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id   83 (253)
T PRK08642          4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT   83 (253)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence            356899998 6999999999888889954343444444433 333344221 11111 1223344444444433344599


Q ss_pred             EEEEccC
Q 018075          254 VSFDCVG  260 (361)
Q Consensus       254 ~vld~~g  260 (361)
                      +++.+.|
T Consensus        84 ~li~~ag   90 (253)
T PRK08642         84 TVVNNAL   90 (253)
T ss_pred             EEEECCC
Confidence            9999875

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=95.15  E-value=0.24  Score=45.00  Aligned_cols=90  Identities=13%  Similarity=0.155  Sum_probs=60.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      .|.+|.|+|.|.+|...++.++.+|+ .|++.+...++..     +.....    ...++.+    +.    ...|+|+.
T Consensus       135 ~g~tvgIvG~G~IG~~vA~~l~afG~-~V~~~~~~~~~~~-----~~~~~~----~~~~l~e----~l----~~aDvvv~  196 (312)
T PRK15469        135 EDFTIGILGAGVLGSKVAQSLQTWGF-PLRCWSRSRKSWP-----GVQSFA----GREELSA----FL----SQTRVLIN  196 (312)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCCCCCC-----Cceeec----ccccHHH----HH----hcCCEEEE
Confidence            67899999999999999999999999 6777776543321     111111    0112222    21    46899999


Q ss_pred             ccCChHHH-----HHHHHhhcCCCEEEEEccCC
Q 018075          258 CVGFDKTM-----STALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       258 ~~g~~~~~-----~~~~~~l~~~G~~v~~g~~~  285 (361)
                      +.......     ...++.|+++..++-++...
T Consensus       197 ~lPlt~~T~~li~~~~l~~mk~ga~lIN~aRG~  229 (312)
T PRK15469        197 LLPNTPETVGIINQQLLEQLPDGAYLLNLARGV  229 (312)
T ss_pred             CCCCCHHHHHHhHHHHHhcCCCCcEEEECCCcc
Confidence            88754333     34677899999888777554

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.15  E-value=0.077  Score=50.99  Aligned_cols=92  Identities=11%  Similarity=0.156  Sum_probs=56.5

Q ss_pred             cCCCCCCEEE----EEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCE-EeecCCCccchhHHHHHHHhh
Q 018075          174 ANVGPETNVM----IMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE-TAKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       174 ~~~~~g~~vl----I~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~  247 (361)
                      .++++|+++|    |+| +|++|.+++|+++..|++ |+++...+.+....+..+.+. +.+  .....+.+.+...   
T Consensus        29 ~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~d--~~~~~~~~~l~~~---  102 (450)
T PRK08261         29 RRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYD-VVANNDGGLTWAAGWGDRFGALVFD--ATGITDPADLKAL---  102 (450)
T ss_pred             cCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCe-eeecCccccccccCcCCcccEEEEE--CCCCCCHHHHHHH---
Confidence            5678999998    886 699999999999999994 666655444332222223332 222  1111222222111   


Q ss_pred             cCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCC
Q 018075          248 MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       248 ~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~  285 (361)
                                    -..++..++.|.++|+++.++...
T Consensus       103 --------------~~~~~~~l~~l~~~griv~i~s~~  126 (450)
T PRK08261        103 --------------YEFFHPVLRSLAPCGRVVVLGRPP  126 (450)
T ss_pred             --------------HHHHHHHHHhccCCCEEEEEcccc
Confidence                          025666778888899998887543

>TIGR00452 methyltransferase, putative

Probab=95.13  E-value=0.27  Score=44.66  Aligned_cols=100  Identities=16%  Similarity=0.162  Sum_probs=61.8

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHH---HHHHc-CCCEEeecCCCccchhHHHHHHHhh
Q 018075          172 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS---IARNL-GADETAKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       172 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~---~~~~l-g~~~~~~~~~~~~~~~~~~~~~~~~  247 (361)
                      ......+|++||-+|||. |..+..+++ .|+..|++++.++.-..   .++++ +...-+.+..  .+.    .++.. 
T Consensus       115 ~~l~~~~g~~VLDvGCG~-G~~~~~~~~-~g~~~v~GiDpS~~ml~q~~~~~~~~~~~~~v~~~~--~~i----e~lp~-  185 (314)
T TIGR00452       115 PHLSPLKGRTILDVGCGS-GYHMWRMLG-HGAKSLVGIDPTVLFLCQFEAVRKLLDNDKRAILEP--LGI----EQLHE-  185 (314)
T ss_pred             HhcCCCCCCEEEEeccCC-cHHHHHHHH-cCCCEEEEEcCCHHHHHHHHHHHHHhccCCCeEEEE--CCH----HHCCC-
Confidence            345667899999999987 777777765 47767999998885432   23332 2111111100  111    11211 


Q ss_pred             cCCCccEEEEcc-----CCh-HHHHHHHHhhcCCCEEEEE
Q 018075          248 MGSGIDVSFDCV-----GFD-KTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       248 ~~~~~d~vld~~-----g~~-~~~~~~~~~l~~~G~~v~~  281 (361)
                       ...||+|+...     ..+ ..+..+.+.|++||++++-
T Consensus       186 -~~~FD~V~s~gvL~H~~dp~~~L~el~r~LkpGG~Lvle  224 (314)
T TIGR00452       186 -LYAFDTVFSMGVLYHRKSPLEHLKQLKHQLVIKGELVLE  224 (314)
T ss_pred             -CCCcCEEEEcchhhccCCHHHHHHHHHHhcCCCCEEEEE
Confidence             24699998642     122 5788899999999999874

Known examples to date are restricted to the proteobacteria.

>PRK15451 tRNA cmo(5)U34 methyltransferase; Provisional

Probab=95.11  E-value=0.061  Score=47.16  Aligned_cols=97  Identities=22%  Similarity=0.244  Sum_probs=62.1

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHc---CCCEEEEEeCChhHHHHHHHc----CCCEEeecCCCccchhHHHHHHHhhc
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAF---GAPRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~---g~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      +.++.+||-+|||. |..+..+++..   ++ .+++++.+++-.+.+++.    +...-+.+..  .+..    ++   .
T Consensus        54 ~~~~~~vLDlGcGt-G~~~~~l~~~~~~~~~-~v~gvD~S~~ml~~A~~~~~~~~~~~~v~~~~--~d~~----~~---~  122 (247)
T PRK15451         54 VQPGTQVYDLGCSL-GAATLSVRRNIHHDNC-KIIAIDNSPAMIERCRRHIDAYKAPTPVDVIE--GDIR----DI---A  122 (247)
T ss_pred             CCCCCEEEEEcccC-CHHHHHHHHhcCCCCC-eEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEe--CChh----hC---C
Confidence            56889999999876 66777777742   45 799999999877776553    2221111111  1211    11   1


Q ss_pred             CCCccEEEEccC-----C---hHHHHHHHHhhcCCCEEEEEcc
Q 018075          249 GSGIDVSFDCVG-----F---DKTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       249 ~~~~d~vld~~g-----~---~~~~~~~~~~l~~~G~~v~~g~  283 (361)
                      ...+|+++.+..     .   ...++.+.+.|+|||.++....
T Consensus       123 ~~~~D~vv~~~~l~~l~~~~~~~~l~~i~~~LkpGG~l~l~e~  165 (247)
T PRK15451        123 IENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEK  165 (247)
T ss_pred             CCCCCEEehhhHHHhCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence            235788775321     1   2468889999999999998763

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=95.11  E-value=0.39  Score=42.71  Aligned_cols=104  Identities=14%  Similarity=0.189  Sum_probs=62.8

Q ss_pred             HHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCCE-EeecCCCccchhHHHHHHH
Q 018075          169 HACRR-ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADE-TAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       169 ~~l~~-~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~-~~~~~~~~~~~~~~~~~~~  245 (361)
                      .+++. ....++.+++|+|+|++|.+++..+...|. .+..++++.++.+ ++++++... ....     ...+    . 
T Consensus       106 ~~l~~~~~~~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~la~~~~~~~~~~~~-----~~~~----~-  174 (270)
T TIGR00507       106 SDLERLIPLRPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEELAERFQRYGEIQAF-----SMDE----L-  174 (270)
T ss_pred             HHHHhcCCCccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhcCceEEe-----chhh----h-
Confidence            34444 333557899999999999999988888898 6777778776643 444443211 1110     1110    1 


Q ss_pred             hhcCCCccEEEEccCChHHHH------HHHHhhcCCCEEEEEccCCC
Q 018075          246 NAMGSGIDVSFDCVGFDKTMS------TALNATRPGGKVCLIGLAKT  286 (361)
Q Consensus       246 ~~~~~~~d~vld~~g~~~~~~------~~~~~l~~~G~~v~~g~~~~  286 (361)
                        ....+|+|++|++.. ...      -....++++..++.+.....
T Consensus       175 --~~~~~DivInatp~g-m~~~~~~~~~~~~~l~~~~~v~D~~y~p~  218 (270)
T TIGR00507       175 --PLHRVDLIINATSAG-MSGNIDEPPVPAEKLKEGMVVYDMVYNPG  218 (270)
T ss_pred             --cccCccEEEECCCCC-CCCCCCCCCCCHHHcCCCCEEEEeccCCC
Confidence              124699999998853 111      11345777777776655443

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A

Probab=95.11  E-value=0.066  Score=40.68  Aligned_cols=95  Identities=23%  Similarity=0.329  Sum_probs=58.6

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc----CCC-EEeecCCCccchhHHHHHHHhhcCCCcc
Q 018075          179 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GAD-ETAKVSTDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       179 g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      |.+||-.|+|. |..++.+++.. ...+++++.++...+.++..    +.. .+... .  .+..+....+   ...++|
T Consensus         1 g~~vlD~~~G~-G~~~~~~~~~~-~~~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~-~--~D~~~~~~~~---~~~~~D   72 (117)
T PF13659_consen    1 GDRVLDPGCGS-GTFLLAALRRG-AARVTGVDIDPEAVELARRNLPRNGLDDRVEVI-V--GDARDLPEPL---PDGKFD   72 (117)
T ss_dssp             TEEEEEETSTT-CHHHHHHHHHC-TCEEEEEESSHHHHHHHHHHCHHCTTTTTEEEE-E--SHHHHHHHTC---TTT-EE
T ss_pred             CCEEEEcCcch-HHHHHHHHHHC-CCeEEEEEECHHHHHHHHHHHHHccCCceEEEE-E--Cchhhchhhc---cCceeE
Confidence            56788887654 55666666655 45899999999988877662    221 11111 1  2333332112   357899


Q ss_pred             EEEEccCCh--------------HHHHHHHHhhcCCCEEEEE
Q 018075          254 VSFDCVGFD--------------KTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       254 ~vld~~g~~--------------~~~~~~~~~l~~~G~~v~~  281 (361)
                      +|+-+..-.              ..++.+.+.|+++|.++.+
T Consensus        73 ~Iv~npP~~~~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~  114 (117)
T PF13659_consen   73 LIVTNPPYGPRSGDKAALRRLYSRFLEAAARLLKPGGVLVFI  114 (117)
T ss_dssp             EEEE--STTSBTT----GGCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEEECCCCccccccchhhHHHHHHHHHHHHHHcCCCeEEEEE
Confidence            998743211              3477889999999999875

...

>COG2521 Predicted archaeal methyltransferase [General function prediction only]

Probab=95.11  E-value=0.1  Score=44.40  Aligned_cols=111  Identities=17%  Similarity=0.154  Sum_probs=72.9

Q ss_pred             chhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc------C--CCEEeecCCC
Q 018075          162 EPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL------G--ADETAKVSTD  233 (361)
Q Consensus       162 ~~~~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l------g--~~~~~~~~~~  233 (361)
                      .|+.-|..=+...+++.|++||=. |+++|+.||.-++ .||..|+.+..++.-+++++--      -  +-.++.    
T Consensus       118 dP~~Dt~~Kv~~V~~~~G~rVLDt-C~GLGYtAi~a~~-rGA~~VitvEkdp~VLeLa~lNPwSr~l~~~~i~iil----  191 (287)
T COG2521         118 DPLEDTLAKVELVKVKRGERVLDT-CTGLGYTAIEALE-RGAIHVITVEKDPNVLELAKLNPWSRELFEIAIKIIL----  191 (287)
T ss_pred             CcHHHHHhhhheeccccCCEeeee-ccCccHHHHHHHH-cCCcEEEEEeeCCCeEEeeccCCCCccccccccEEec----
Confidence            345555444555667889998864 6777999988766 6886899998887766655321      1  111221    


Q ss_pred             ccchhHHHHHHHhhcCCCccEEEEcc------C---ChHHHHHHHHhhcCCCEEEEEc
Q 018075          234 IEDVDTDVGKIQNAMGSGIDVSFDCV------G---FDKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~d~vld~~------g---~~~~~~~~~~~l~~~G~~v~~g  282 (361)
                       +|..+.++.+.   ...||++|.--      |   +.+...++.+.|+|||++..+-
T Consensus       192 -GD~~e~V~~~~---D~sfDaIiHDPPRfS~AgeLYseefY~El~RiLkrgGrlFHYv  245 (287)
T COG2521         192 -GDAYEVVKDFD---DESFDAIIHDPPRFSLAGELYSEEFYRELYRILKRGGRLFHYV  245 (287)
T ss_pred             -ccHHHHHhcCC---ccccceEeeCCCccchhhhHhHHHHHHHHHHHcCcCCcEEEEe
Confidence             45556665553   56799998632      1   1246778999999999998763

>PRK06196 oxidoreductase; Provisional

Probab=95.09  E-value=0.19  Score=45.72  Aligned_cols=82  Identities=20%  Similarity=0.279  Sum_probs=50.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HHHcCCCEEeecC-CCccchhHHHHHHHhhcCCCccE
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLGADETAKVS-TDIEDVDTDVGKIQNAMGSGIDV  254 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~  254 (361)
                      .+.++||.| +|++|.+++..+...|+ .|+.++++.++.+. ++++..-..+..+ .+..+..+.+.++.. ...++|+
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~-~~~~iD~  102 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLD-SGRRIDI  102 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHh-cCCCCCE
Confidence            467899998 59999999998888999 57777777765543 3333211122111 222333333443332 1357999


Q ss_pred             EEEccCC
Q 018075          255 SFDCVGF  261 (361)
Q Consensus       255 vld~~g~  261 (361)
                      ++++.|.
T Consensus       103 li~nAg~  109 (315)
T PRK06196        103 LINNAGV  109 (315)
T ss_pred             EEECCCC
Confidence            9998873

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=95.07  E-value=0.32  Score=42.29  Aligned_cols=82  Identities=17%  Similarity=0.198  Sum_probs=50.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChh--HHHHHHHcCCC-EEeecC-CCccchhHHHHHHHhhcCCCc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ--RLSIARNLGAD-ETAKVS-TDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~--~~~~~~~lg~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      +|.++||.| +|++|.+.+..+...|+ .|+.++++..  ..+.+++.+.. ..+..+ .+..+....+.++... ..++
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~~   81 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEE-FGHI   81 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH-cCCC
Confidence            578999998 58999999998888999 5777766542  22333444432 112211 2223344444443322 2479


Q ss_pred             cEEEEccCC
Q 018075          253 DVSFDCVGF  261 (361)
Q Consensus       253 d~vld~~g~  261 (361)
                      |+++++.|.
T Consensus        82 d~li~~ag~   90 (248)
T TIGR01832        82 DILVNNAGI   90 (248)
T ss_pred             CEEEECCCC
Confidence            999998864

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=95.07  E-value=0.12  Score=45.94  Aligned_cols=76  Identities=18%  Similarity=0.149  Sum_probs=53.0

Q ss_pred             HHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcCCCEEeecCCCccchhHHHHHHHh
Q 018075          168 VHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADETAKVSTDIEDVDTDVGKIQN  246 (361)
Q Consensus       168 ~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~  246 (361)
                      +.+++..++..+.+++|+|+|+.+.+++.-++..|+..+..+.++.++.+.+ +.++...           ...   +  
T Consensus       111 ~~~L~~~~~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~~-----------~~~---~--  174 (272)
T PRK12550        111 AKLLASYQVPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYEW-----------RPD---L--  174 (272)
T ss_pred             HHHHHhcCCCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCcc-----------hhh---c--
Confidence            4455544455567999999999999999999999998888888888776544 4443211           000   1  


Q ss_pred             hcCCCccEEEEccC
Q 018075          247 AMGSGIDVSFDCVG  260 (361)
Q Consensus       247 ~~~~~~d~vld~~g  260 (361)
                       ....+|+|++|+.
T Consensus       175 -~~~~~dlvINaTp  187 (272)
T PRK12550        175 -GGIEADILVNVTP  187 (272)
T ss_pred             -ccccCCEEEECCc
Confidence             1245899999876

>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=95.07  E-value=0.63  Score=39.84  Aligned_cols=47  Identities=21%  Similarity=0.229  Sum_probs=39.3

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh----------hHHHHHHHcC
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV----------QRLSIARNLG  223 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~----------~~~~~~~~lg  223 (361)
                      -.|.+|+|+|.|.+|..+++++...|+..|.+.|.+.          +..+..++.+
T Consensus        21 l~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~~~   77 (217)
T cd05211          21 LEGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVALG   77 (217)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHHHHHHhhC
Confidence            4689999999999999999999999996677778877          7777666654

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral

>PRK05134 bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase; Provisional

Probab=95.05  E-value=0.16  Score=44.05  Aligned_cols=98  Identities=20%  Similarity=0.197  Sum_probs=61.9

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc----CCCEEeecCCCccchhHHHHHHHhhcC
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      ....++.+||-+|+|. |..+..+++. +. .+++++.+++..+.+++.    +...  .+..  .+..+...    ..+
T Consensus        44 ~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~iD~s~~~~~~a~~~~~~~~~~~--~~~~--~~~~~~~~----~~~  112 (233)
T PRK05134         44 AGGLFGKRVLDVGCGG-GILSESMARL-GA-DVTGIDASEENIEVARLHALESGLKI--DYRQ--TTAEELAA----EHP  112 (233)
T ss_pred             ccCCCCCeEEEeCCCC-CHHHHHHHHc-CC-eEEEEcCCHHHHHHHHHHHHHcCCce--EEEe--cCHHHhhh----hcC
Confidence            3456788999999875 6677777774 66 689999998877666542    2211  1111  12222211    124


Q ss_pred             CCccEEEE-----ccCCh-HHHHHHHHhhcCCCEEEEEc
Q 018075          250 SGIDVSFD-----CVGFD-KTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       250 ~~~d~vld-----~~g~~-~~~~~~~~~l~~~G~~v~~g  282 (361)
                      .++|+|+-     ..... ..+..+.+.|+++|+++...
T Consensus       113 ~~fD~Ii~~~~l~~~~~~~~~l~~~~~~L~~gG~l~v~~  151 (233)
T PRK05134        113 GQFDVVTCMEMLEHVPDPASFVRACAKLVKPGGLVFFST  151 (233)
T ss_pred             CCccEEEEhhHhhccCCHHHHHHHHHHHcCCCcEEEEEe
Confidence            68999965     23322 35688889999999988654

>PRK06484 short chain dehydrogenase; Validated

Probab=95.03  E-value=0.45  Score=46.62  Aligned_cols=82  Identities=23%  Similarity=0.385  Sum_probs=54.2

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCCE---EeecCCCccchhHHHHHHHhhcCCC
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADE---TAKVSTDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  251 (361)
                      .++.++||.| ++++|.+.++.+...|+ .|+.++++.++.+ +.++++...   ..++ .+..+....+.++.+. ..+
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~g~   79 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDV-SDEAQIREGFEQLHRE-FGR   79 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEecc-CCHHHHHHHHHHHHHH-hCC
Confidence            3578899998 58999999999888999 6777777777654 445565332   1222 2233444444444332 247


Q ss_pred             ccEEEEccCC
Q 018075          252 IDVSFDCVGF  261 (361)
Q Consensus       252 ~d~vld~~g~  261 (361)
                      +|+++++.|.
T Consensus        80 iD~li~nag~   89 (520)
T PRK06484         80 IDVLVNNAGV   89 (520)
T ss_pred             CCEEEECCCc
Confidence            9999998874

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=95.00  E-value=0.53  Score=43.71  Aligned_cols=83  Identities=16%  Similarity=0.126  Sum_probs=48.5

Q ss_pred             CCCCEEEEEC-CCHHHHH--HHHHHHHcCCCEEEEEeCCh---h-------------HHHHHHHcCCCE-EeecC-CCcc
Q 018075          177 GPETNVMIMG-SGPIGLV--TLLAARAFGAPRIIITDVDV---Q-------------RLSIARNLGADE-TAKVS-TDIE  235 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~--ai~la~~~g~~~vv~v~~~~---~-------------~~~~~~~lg~~~-~~~~~-~~~~  235 (361)
                      .-+.++||.| ++++|.+  .++.+ ..|++ +++++...   +             -.+.+++.|... .+..+ .+.+
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~-Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E  116 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGAD-TLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDE  116 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCe-EEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHH
Confidence            3457889998 5899999  45555 78994 56665322   1             123455666432 22222 2233


Q ss_pred             chhHHHHHHHhhcCCCccEEEEccCCh
Q 018075          236 DVDTDVGKIQNAMGSGIDVSFDCVGFD  262 (361)
Q Consensus       236 ~~~~~~~~~~~~~~~~~d~vld~~g~~  262 (361)
                      ...+.+.++.+.. +++|+++++.+.+
T Consensus       117 ~v~~lie~I~e~~-G~IDiLVnSaA~~  142 (398)
T PRK13656        117 IKQKVIELIKQDL-GQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHHHhc-CCCCEEEECCccC
Confidence            4444455554322 4799999988766

>PRK07904 short chain dehydrogenase; Provisional

Probab=94.96  E-value=0.25  Score=43.37  Aligned_cols=83  Identities=19%  Similarity=0.328  Sum_probs=49.0

Q ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcC-CCEEEEEeCChhH-HH-HHHH---cCCC--EEeecC-CCccchhHHHHHHH
Q 018075          176 VGPETNVMIMG-SGPIGLVTLLAARAFG-APRIIITDVDVQR-LS-IARN---LGAD--ETAKVS-TDIEDVDTDVGKIQ  245 (361)
Q Consensus       176 ~~~g~~vlI~G-~g~~G~~ai~la~~~g-~~~vv~v~~~~~~-~~-~~~~---lg~~--~~~~~~-~~~~~~~~~~~~~~  245 (361)
                      +..+.++||.| +|++|.+.++-+...| + .|+.+++++++ .+ .+++   .+..  ..+..+ .+..+..+.++++.
T Consensus         5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~   83 (253)
T PRK07904          5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAF   83 (253)
T ss_pred             cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHH
Confidence            45678999998 5999999998766664 7 56777776654 22 3333   3321  122222 22233333444443


Q ss_pred             hhcCCCccEEEEccCC
Q 018075          246 NAMGSGIDVSFDCVGF  261 (361)
Q Consensus       246 ~~~~~~~d~vld~~g~  261 (361)
                      .  .+++|+++.+.|.
T Consensus        84 ~--~g~id~li~~ag~   97 (253)
T PRK07904         84 A--GGDVDVAIVAFGL   97 (253)
T ss_pred             h--cCCCCEEEEeeec
Confidence            3  2579999987764

>PRK05867 short chain dehydrogenase; Provisional

Probab=94.96  E-value=0.27  Score=42.98  Aligned_cols=82  Identities=21%  Similarity=0.289  Sum_probs=51.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHc---CCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---GADE-TAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      .|.++||.| +|++|.+.++.+...|+ .|+.++++.++.+.+ +++   +... .+..+ .+..+..+.+.++.+. -+
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g   85 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAE-LG   85 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH-hC
Confidence            478899998 59999999998888999 577777777654433 222   3211 11111 2223344444444332 24


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|+++.+.|.
T Consensus        86 ~id~lv~~ag~   96 (253)
T PRK05867         86 GIDIAVCNAGI   96 (253)
T ss_pred             CCCEEEECCCC
Confidence            79999998874

>PRK07985 oxidoreductase; Provisional

Probab=94.93  E-value=0.53  Score=42.39  Aligned_cols=105  Identities=15%  Similarity=0.140  Sum_probs=60.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCC--hhHHHHH----HHcCCCE-EeecC-CCccchhHHHHHHHhhc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVD--VQRLSIA----RNLGADE-TAKVS-TDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~--~~~~~~~----~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~  248 (361)
                      ++.++||.| +|++|.+.++.+...|++ |+.+.++  .++.+.+    ++.+... .+..+ .+..+..+.+.++... 
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-  125 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREGAD-VAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA-  125 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCE-EEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH-
Confidence            567899998 599999999988889994 6665433  2222222    2333221 11111 2223344444444332 


Q ss_pred             CCCccEEEEccCCh--------------------------HHHHHHHHhhcCCCEEEEEccC
Q 018075          249 GSGIDVSFDCVGFD--------------------------KTMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       249 ~~~~d~vld~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      -+++|+++.+.|..                          ..++.+.+.+..+|+++.++..
T Consensus       126 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~  187 (294)
T PRK07985        126 LGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSI  187 (294)
T ss_pred             hCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCc
Confidence            34799999987631                          1233444556678999988643

>PRK08264 short chain dehydrogenase; Validated

Probab=94.91  E-value=0.15  Score=44.07  Aligned_cols=77  Identities=19%  Similarity=0.270  Sum_probs=47.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCC-EEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD-ETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      .+.++||.| +|.+|...++.+...|.+.|+.+.++.++.+.   .+.. ..+..+-  .+.. .+.++.+. -..+|++
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~--~~~~-~~~~~~~~-~~~id~v   77 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDV--TDPA-SVAAAAEA-ASDVTIL   77 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecC--CCHH-HHHHHHHh-cCCCCEE
Confidence            467899998 69999999998888998557777777665432   3221 1111111  1211 12222221 2468999


Q ss_pred             EEccCC
Q 018075          256 FDCVGF  261 (361)
Q Consensus       256 ld~~g~  261 (361)
                      |.+.|.
T Consensus        78 i~~ag~   83 (238)
T PRK08264         78 VNNAGI   83 (238)
T ss_pred             EECCCc
Confidence            999886

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=94.91  E-value=0.23  Score=45.28  Aligned_cols=80  Identities=21%  Similarity=0.330  Sum_probs=49.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCC---C-EE--eecCCCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGA---D-ET--AKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~---~-~~--~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      .+.++||.| +|++|...++.+...|+ .|+.++++.++.+ .+++++.   . ..  .++ .+..+....+.++.+ ..
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl-~~~~~v~~~~~~~~~-~~   81 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDL-GDLDSVRRFVDDFRA-LG   81 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecC-CCHHHHHHHHHHHHH-hC
Confidence            467899998 59999999998888898 5777777776654 3333421   1 11  122 222233333333322 23


Q ss_pred             CCccEEEEccC
Q 018075          250 SGIDVSFDCVG  260 (361)
Q Consensus       250 ~~~d~vld~~g  260 (361)
                      .++|+++++.|
T Consensus        82 ~~iD~li~nAg   92 (322)
T PRK07453         82 KPLDALVCNAA   92 (322)
T ss_pred             CCccEEEECCc
Confidence            46999999887

>PRK06198 short chain dehydrogenase; Provisional

Probab=94.89  E-value=0.31  Score=42.71  Aligned_cols=84  Identities=19%  Similarity=0.264  Sum_probs=51.0

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH----HHHHcCCCEE-eecC-CCccchhHHHHHHHhhcC
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS----IARNLGADET-AKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~----~~~~lg~~~~-~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      -++.+++|.| +|++|...++.+...|++.|+.++++.++.+    .+++.+.... +..+ .+..+..+.+..+... -
T Consensus         4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   82 (260)
T PRK06198          4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEA-F   82 (260)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH-h
Confidence            3568899998 5899999999998899965788877765443    2233343221 1111 1222233333333221 2


Q ss_pred             CCccEEEEccCC
Q 018075          250 SGIDVSFDCVGF  261 (361)
Q Consensus       250 ~~~d~vld~~g~  261 (361)
                      +++|++|++.|.
T Consensus        83 g~id~li~~ag~   94 (260)
T PRK06198         83 GRLDALVNAAGL   94 (260)
T ss_pred             CCCCEEEECCCc
Confidence            469999999874

>PRK07062 short chain dehydrogenase; Provisional

Probab=94.89  E-value=0.28  Score=43.23  Aligned_cols=81  Identities=26%  Similarity=0.303  Sum_probs=50.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHc----CCCEE----eecCCCccchhHHHHHHHhh
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL----GADET----AKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l----g~~~~----~~~~~~~~~~~~~~~~~~~~  247 (361)
                      .|.++||.| ++++|.+.++.+...|+ .|+.+++++++.+.+ +++    +...+    .+. .+..+..+.+.++.+.
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~v~~~~~~~~~~   84 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDV-LDEADVAAFAAAVEAR   84 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecC-CCHHHHHHHHHHHHHh
Confidence            478899998 58999999999888999 577787877654432 222    11121    122 2223333344444322


Q ss_pred             cCCCccEEEEccCC
Q 018075          248 MGSGIDVSFDCVGF  261 (361)
Q Consensus       248 ~~~~~d~vld~~g~  261 (361)
                       -+++|+++++.|.
T Consensus        85 -~g~id~li~~Ag~   97 (265)
T PRK07062         85 -FGGVDMLVNNAGQ   97 (265)
T ss_pred             -cCCCCEEEECCCC
Confidence             2469999999874

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=94.88  E-value=0.3  Score=42.44  Aligned_cols=82  Identities=20%  Similarity=0.220  Sum_probs=50.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcC--CC-EEeecC-CCccchhHHHHHHHhhcCCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLG--AD-ETAKVS-TDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg--~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~  251 (361)
                      ++.++||.| +|.+|...++.+...|. .|+.++++.++.+.+ ..+.  .. ..+..+ .+..++...+.+.... ..+
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~   81 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALER-FGS   81 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-hCC
Confidence            467899998 59999999998888899 488888887665433 3332  11 111111 2223333333333222 247


Q ss_pred             ccEEEEccCC
Q 018075          252 IDVSFDCVGF  261 (361)
Q Consensus       252 ~d~vld~~g~  261 (361)
                      +|++|.+.|.
T Consensus        82 ~d~vi~~ag~   91 (251)
T PRK07231         82 VDILVNNAGT   91 (251)
T ss_pred             CCEEEECCCC
Confidence            9999998874

>PRK12746 short chain dehydrogenase; Provisional

Probab=94.87  E-value=0.58  Score=40.84  Aligned_cols=84  Identities=21%  Similarity=0.277  Sum_probs=47.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHc---CCCE-EeecC-CCccchhHHHHHHHhhc--
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNL---GADE-TAKVS-TDIEDVDTDVGKIQNAM--  248 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~l---g~~~-~~~~~-~~~~~~~~~~~~~~~~~--  248 (361)
                      .+.+++|.| +|.+|...++.+...|++.++...++.++.+ .++++   +... .+..+ .+..+....+.++....  
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~   84 (254)
T PRK12746          5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI   84 (254)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence            357899998 6999999999888889843333455555432 32332   2211 12111 22233333344433211  


Q ss_pred             ---CCCccEEEEccCC
Q 018075          249 ---GSGIDVSFDCVGF  261 (361)
Q Consensus       249 ---~~~~d~vld~~g~  261 (361)
                         ..++|++|.+.|.
T Consensus        85 ~~~~~~id~vi~~ag~  100 (254)
T PRK12746         85 RVGTSEIDILVNNAGI  100 (254)
T ss_pred             ccCCCCccEEEECCCC
Confidence               2469999998864

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.86  E-value=0.26  Score=44.03  Aligned_cols=85  Identities=14%  Similarity=0.182  Sum_probs=58.1

Q ss_pred             HHHHhcC-CCCCCEEEEECCCH-HHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHh
Q 018075          169 HACRRAN-VGPETNVMIMGSGP-IGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN  246 (361)
Q Consensus       169 ~~l~~~~-~~~g~~vlI~G~g~-~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~  246 (361)
                      ..++..+ --+|.+++|+|+|. +|...+.++...|+ .|..+.+..+                     +    +.+.  
T Consensus       148 ~~L~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t~---------------------~----L~~~--  199 (283)
T PRK14192        148 RLLKAYNIELAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRTQ---------------------N----LPEL--  199 (283)
T ss_pred             HHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCch---------------------h----HHHH--
Confidence            3455543 35899999999876 99999999999999 5666643111                     1    1111  


Q ss_pred             hcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCC
Q 018075          247 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       247 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~  285 (361)
                        -..+|++++++|.+..+.  .+.++++..++.++...
T Consensus       200 --~~~aDIvI~AtG~~~~v~--~~~lk~gavViDvg~n~  234 (283)
T PRK14192        200 --VKQADIIVGAVGKPELIK--KDWIKQGAVVVDAGFHP  234 (283)
T ss_pred             --hccCCEEEEccCCCCcCC--HHHcCCCCEEEEEEEee
Confidence              146899999998764322  35688988888887553

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=94.86  E-value=0.19  Score=45.15  Aligned_cols=37  Identities=16%  Similarity=0.224  Sum_probs=31.5

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  213 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~  213 (361)
                      .++.+++|.|+|++|.+++..+...|++.|+.+.++.
T Consensus       124 ~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~  160 (289)
T PRK12548        124 VKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD  160 (289)
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence            3578899999999999999888889997788887774

>PRK07856 short chain dehydrogenase; Provisional

Probab=94.86  E-value=0.19  Score=43.98  Aligned_cols=78  Identities=22%  Similarity=0.201  Sum_probs=48.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCC-EEeecC-CCccchhHHHHHHHhhcCCCccE
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD-ETAKVS-TDIEDVDTDVGKIQNAMGSGIDV  254 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~  254 (361)
                      .+.++||.| +|++|...++.+...|+ .|+.++++.++    +..+.. ..+..+ .+..+..+.+.++.+. ..++|+
T Consensus         5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~   78 (252)
T PRK07856          5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPE----TVDGRPAEFHAADVRDPDQVAALVDAIVER-HGRLDV   78 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhh----hhcCCceEEEEccCCCHHHHHHHHHHHHHH-cCCCCE
Confidence            578999998 59999999998888999 57777776654    112211 111111 2223334444443332 246999


Q ss_pred             EEEccCC
Q 018075          255 SFDCVGF  261 (361)
Q Consensus       255 vld~~g~  261 (361)
                      +|.+.|.
T Consensus        79 vi~~ag~   85 (252)
T PRK07856         79 LVNNAGG   85 (252)
T ss_pred             EEECCCC
Confidence            9998873

>PRK07035 short chain dehydrogenase; Provisional

Probab=94.85  E-value=0.27  Score=42.97  Aligned_cols=82  Identities=17%  Similarity=0.271  Sum_probs=50.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HHHc---CCC-EEeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNL---GAD-ETAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~l---g~~-~~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      ++.++||.| +|++|.+.++.+...|+ .|+.++++.++.+. .+++   +.. ..+..+ .+..+....+.++.+.. .
T Consensus         7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~   84 (252)
T PRK07035          7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERH-G   84 (252)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence            457899998 69999999998888999 67888877665432 2222   321 112111 12223333344433322 3


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|+++.+.|.
T Consensus        85 ~id~li~~ag~   95 (252)
T PRK07035         85 RLDILVNNAAA   95 (252)
T ss_pred             CCCEEEECCCc
Confidence            69999998873

>PRK15068 tRNA mo(5)U34 methyltransferase; Provisional

Probab=94.85  E-value=0.18  Score=46.05  Aligned_cols=97  Identities=20%  Similarity=0.218  Sum_probs=60.7

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHH---HHHH-cCCC-EEeecCCCccchhHHHHHHHhhc
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS---IARN-LGAD-ETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~---~~~~-lg~~-~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      ....+|.+||-+|||. |..+..+++. |+..|+++|.+..-..   ..++ .+.. .+ .+..  .++    ..+..  
T Consensus       118 l~~l~g~~VLDIGCG~-G~~~~~la~~-g~~~V~GiD~S~~~l~q~~a~~~~~~~~~~i-~~~~--~d~----e~lp~--  186 (322)
T PRK15068        118 LSPLKGRTVLDVGCGN-GYHMWRMLGA-GAKLVVGIDPSQLFLCQFEAVRKLLGNDQRA-HLLP--LGI----EQLPA--  186 (322)
T ss_pred             hCCCCCCEEEEeccCC-cHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHHHHhcCCCCCe-EEEe--CCH----HHCCC--
Confidence            4446789999999987 8888888876 6657999998875332   2222 1211 11 1111  111    11211  


Q ss_pred             CCCccEEEEcc------CChHHHHHHHHhhcCCCEEEEE
Q 018075          249 GSGIDVSFDCV------GFDKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       249 ~~~~d~vld~~------g~~~~~~~~~~~l~~~G~~v~~  281 (361)
                      ...||+|+...      .-...+..+.+.|+|||++++-
T Consensus       187 ~~~FD~V~s~~vl~H~~dp~~~L~~l~~~LkpGG~lvl~  225 (322)
T PRK15068        187 LKAFDTVFSMGVLYHRRSPLDHLKQLKDQLVPGGELVLE  225 (322)
T ss_pred             cCCcCEEEECChhhccCCHHHHHHHHHHhcCCCcEEEEE
Confidence            35799998742      1125788899999999999864

>PRK05884 short chain dehydrogenase; Provisional

Probab=94.85  E-value=0.24  Score=42.60  Aligned_cols=74  Identities=18%  Similarity=0.292  Sum_probs=46.9

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HHHcCCCEE-eecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          181 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       181 ~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      +++|.| +|++|.+.++.+...|+ .|+.+++++++.+. .++++...+ .++ .+..+..+..+++    ..++|++++
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~-~~~~~v~~~~~~~----~~~id~lv~   75 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDN-TDPASLEEARGLF----PHHLDTIVN   75 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCC-CCHHHHHHHHHHH----hhcCcEEEE
Confidence            588998 59999999998888899 57777787776553 344554322 222 2222333333322    236899999


Q ss_pred             ccC
Q 018075          258 CVG  260 (361)
Q Consensus       258 ~~g  260 (361)
                      +.|
T Consensus        76 ~ag   78 (223)
T PRK05884         76 VPA   78 (223)
T ss_pred             CCC
Confidence            865

>PLN02253 xanthoxin dehydrogenase

Probab=94.84  E-value=0.26  Score=43.83  Aligned_cols=81  Identities=20%  Similarity=0.253  Sum_probs=49.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCC--C-EE--eecCCCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGA--D-ET--AKVSTDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~--~-~~--~~~~~~~~~~~~~~~~~~~~~~~  250 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.++++++..+ ..++++.  . ..  .+. .+..+..+.+..+.+. -+
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~d~~~~~~~~~~~~~~-~g   93 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDV-TVEDDVSRAVDFTVDK-FG   93 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeec-CCHHHHHHHHHHHHHH-hC
Confidence            467899998 69999999998888899 5777777655433 3344432  1 11  122 2223333444443332 24


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|+++++.|.
T Consensus        94 ~id~li~~Ag~  104 (280)
T PLN02253         94 TLDIMVNNAGL  104 (280)
T ss_pred             CCCEEEECCCc
Confidence            79999998864

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=94.84  E-value=0.73  Score=37.47  Aligned_cols=91  Identities=18%  Similarity=0.260  Sum_probs=59.1

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEcc
Q 018075          180 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV  259 (361)
Q Consensus       180 ~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  259 (361)
                      .+|-++|.|.+|...+.-+...|. .|.+-++++++.+.+.+.|+...       .+..+..        ...|+||-++
T Consensus         2 ~~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~~~~-------~s~~e~~--------~~~dvvi~~v   65 (163)
T PF03446_consen    2 MKIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGAEVA-------DSPAEAA--------EQADVVILCV   65 (163)
T ss_dssp             BEEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTEEEE-------SSHHHHH--------HHBSEEEE-S
T ss_pred             CEEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhhhhh-------hhhhhHh--------hcccceEeec
Confidence            368889999999999998888999 68888999999888887774332       1222222        2468999998


Q ss_pred             CChHHHHHH------HHhhcCCCEEEEEccCCC
Q 018075          260 GFDKTMSTA------LNATRPGGKVCLIGLAKT  286 (361)
Q Consensus       260 g~~~~~~~~------~~~l~~~G~~v~~g~~~~  286 (361)
                      ..+...+..      ...+.++..++.++....
T Consensus        66 ~~~~~v~~v~~~~~i~~~l~~g~iiid~sT~~p   98 (163)
T PF03446_consen   66 PDDDAVEAVLFGENILAGLRPGKIIIDMSTISP   98 (163)
T ss_dssp             SSHHHHHHHHHCTTHGGGS-TTEEEEE-SS--H
T ss_pred             ccchhhhhhhhhhHHhhccccceEEEecCCcch
Confidence            876555554      344566677766655443

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.84  E-value=0.3  Score=43.03  Aligned_cols=81  Identities=16%  Similarity=0.185  Sum_probs=48.8

Q ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHcCCCEEEEEeCChhHHHHH----HHcCCCEE--eecCCCccchhHHHHHHHhhc
Q 018075          178 PETNVMIMGS-G--PIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADET--AKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       178 ~g~~vlI~G~-g--~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~--~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      .|..+||.|+ +  ++|.+.++.+...|+ .|+.++++++..+.+    ++.+....  .|. .+..+....+.++.+. 
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv-~~~~~v~~~~~~~~~~-   83 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDV-TNPKSISNLFDDIKEK-   83 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccC-CCHHHHHHHHHHHHHH-
Confidence            5678899985 4  799999888888899 566666654222222    33343322  232 2334444555544432 


Q ss_pred             CCCccEEEEccCC
Q 018075          249 GSGIDVSFDCVGF  261 (361)
Q Consensus       249 ~~~~d~vld~~g~  261 (361)
                      -+++|+++++.|.
T Consensus        84 ~g~iDilVnnag~   96 (260)
T PRK06603         84 WGSFDFLLHGMAF   96 (260)
T ss_pred             cCCccEEEEcccc
Confidence            2469999998763

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.83  E-value=0.4  Score=42.73  Aligned_cols=86  Identities=15%  Similarity=0.202  Sum_probs=59.4

Q ss_pred             HHHHHhcCC-CCCCEEEEECCC-HHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHH
Q 018075          168 VHACRRANV-GPETNVMIMGSG-PIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       168 ~~~l~~~~~-~~g~~vlI~G~g-~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~  245 (361)
                      +..++..++ -.|.+++|+|.| -+|..++.++...|+ .|..+.+..                     .+    +.+. 
T Consensus       146 ~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t---------------------~~----l~~~-  198 (286)
T PRK14175        146 MEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRS---------------------KD----MASY-  198 (286)
T ss_pred             HHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCc---------------------hh----HHHH-
Confidence            344555443 479999999965 599999999999999 455554321                     01    1111 


Q ss_pred             hhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCC
Q 018075          246 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       246 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~  285 (361)
                         -..+|+|+.++|.+..+..  +.++++..++.+|...
T Consensus       199 ---~~~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~~  233 (286)
T PRK14175        199 ---LKDADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNTP  233 (286)
T ss_pred             ---HhhCCEEEECCCCCcccCH--HHcCCCcEEEEcCCCc
Confidence               1469999999998854444  4588888888888643

>PRK06179 short chain dehydrogenase; Provisional

Probab=94.83  E-value=0.12  Score=45.73  Aligned_cols=79  Identities=24%  Similarity=0.264  Sum_probs=50.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCE-EeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE-TAKVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      .+.+++|.| +|++|...++.+...|+ .|+.++++.++.+...  +... ..++ .+.+++.+.+.++... -+++|++
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~--~~~~~~~D~-~d~~~~~~~~~~~~~~-~g~~d~l   77 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPIP--GVELLELDV-TDDASVQAAVDEVIAR-AGRIDVL   77 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhccccC--CCeeEEeec-CCHHHHHHHHHHHHHh-CCCCCEE
Confidence            356789998 59999999998888899 5788877765543221  2221 1222 2334445555544332 3469999


Q ss_pred             EEccCC
Q 018075          256 FDCVGF  261 (361)
Q Consensus       256 ld~~g~  261 (361)
                      |++.|.
T Consensus        78 i~~ag~   83 (270)
T PRK06179         78 VNNAGV   83 (270)
T ss_pred             EECCCC
Confidence            999885

>PRK05562 precorrin-2 dehydrogenase; Provisional

Probab=94.83  E-value=1.2  Score=38.11  Aligned_cols=91  Identities=12%  Similarity=0.061  Sum_probs=53.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeC--ChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDV--DVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~--~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      ++.+|||+|+|.++.-=+..+...|++ |.++..  +++-.++++ .+.-..+   .  ..+...  .     -.++++|
T Consensus        24 ~~~~VLVVGGG~VA~RK~~~Ll~~gA~-VtVVap~i~~el~~l~~-~~~i~~~---~--r~~~~~--d-----l~g~~LV   89 (223)
T PRK05562         24 NKIKVLIIGGGKAAFIKGKTFLKKGCY-VYILSKKFSKEFLDLKK-YGNLKLI---K--GNYDKE--F-----IKDKHLI   89 (223)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEcCCCCHHHHHHHh-CCCEEEE---e--CCCChH--H-----hCCCcEE
Confidence            578999999999998888888889995 444432  222223322 2221111   1  122111  1     1479999


Q ss_pred             EEccCChHHHHHHHHhhcCCCEEEEEc
Q 018075          256 FDCVGFDKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       256 ld~~g~~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      |-+++.++.-+.+....+..+.++..-
T Consensus        90 iaATdD~~vN~~I~~~a~~~~~lvn~v  116 (223)
T PRK05562         90 VIATDDEKLNNKIRKHCDRLYKLYIDC  116 (223)
T ss_pred             EECCCCHHHHHHHHHHHHHcCCeEEEc
Confidence            999998744444445555556555543

>PRK14968 putative methyltransferase; Provisional

Probab=94.82  E-value=0.15  Score=42.31  Aligned_cols=43  Identities=23%  Similarity=0.474  Sum_probs=33.1

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN  221 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~  221 (361)
                      ..+++++|..|+|. |..+..+++. +. .+++++.+++..+.+++
T Consensus        21 ~~~~~~vLd~G~G~-G~~~~~l~~~-~~-~v~~~D~s~~~~~~a~~   63 (188)
T PRK14968         21 DKKGDRVLEVGTGS-GIVAIVAAKN-GK-KVVGVDINPYAVECAKC   63 (188)
T ss_pred             ccCCCEEEEEcccc-CHHHHHHHhh-cc-eEEEEECCHHHHHHHHH
Confidence            47888999998765 6677777776 66 79999999887766543

>PRK06940 short chain dehydrogenase; Provisional

Probab=94.81  E-value=0.6  Score=41.53  Aligned_cols=99  Identities=22%  Similarity=0.336  Sum_probs=57.2

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHc---CCCE-EeecC-CCccchhHHHHHHHhhcCCCcc
Q 018075          180 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNL---GADE-TAKVS-TDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       180 ~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~l---g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      ..++|.|+|++|.+.+..+. .|+ .|+.+++++++.+ ..+++   +... .+..+ .+.++..+.+.++..  -.++|
T Consensus         3 k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~--~g~id   78 (275)
T PRK06940          3 EVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQT--LGPVT   78 (275)
T ss_pred             CEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHh--cCCCC
Confidence            46788898899999998775 788 6777777766543 22322   3221 12111 222334444443321  24799


Q ss_pred             EEEEccCChH------------------HHHHHHHhhcCCCEEEEEc
Q 018075          254 VSFDCVGFDK------------------TMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       254 ~vld~~g~~~------------------~~~~~~~~l~~~G~~v~~g  282 (361)
                      +++++.|...                  .++...+.+..+|+++.++
T Consensus        79 ~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~is  125 (275)
T PRK06940         79 GLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIA  125 (275)
T ss_pred             EEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEE
Confidence            9999987431                  1333444556667766654

>PRK07454 short chain dehydrogenase; Provisional

Probab=94.80  E-value=0.37  Score=41.76  Aligned_cols=83  Identities=18%  Similarity=0.240  Sum_probs=50.4

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-H---HcCCCE-EeecC-CCccchhHHHHHHHhhcC
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-R---NLGADE-TAKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~---~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      ..+.++||.| +|.+|..++..+...|. .|+.+++++++.+.+ +   +.+... .+..+ .+.++....+..+.+. -
T Consensus         4 ~~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   81 (241)
T PRK07454          4 NSMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQ-F   81 (241)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHH-c
Confidence            3457899998 59999999998888999 688888877654333 2   222221 12211 1222333333333321 2


Q ss_pred             CCccEEEEccCC
Q 018075          250 SGIDVSFDCVGF  261 (361)
Q Consensus       250 ~~~d~vld~~g~  261 (361)
                      +++|+++.+.|.
T Consensus        82 ~~id~lv~~ag~   93 (241)
T PRK07454         82 GCPDVLINNAGM   93 (241)
T ss_pred             CCCCEEEECCCc
Confidence            469999999874

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=94.79  E-value=0.93  Score=38.67  Aligned_cols=110  Identities=17%  Similarity=0.187  Sum_probs=71.5

Q ss_pred             CCCCCEEEEEC-C--CHHHHHHHHHHHHcCCCEEEEEeCCh---hHHHHHHHcCCCEEeecCC-CccchhHHHHHHHhhc
Q 018075          176 VGPETNVMIMG-S--GPIGLVTLLAARAFGAPRIIITDVDV---QRLSIARNLGADETAKVST-DIEDVDTDVGKIQNAM  248 (361)
Q Consensus       176 ~~~g~~vlI~G-~--g~~G~~ai~la~~~g~~~vv~v~~~~---~~~~~~~~lg~~~~~~~~~-~~~~~~~~~~~~~~~~  248 (361)
                      +-.|++.||+| +  -+++...++.++..|++..+.-...+   .-.++++++|.+.++..+- ++++....-.++.+ .
T Consensus         3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~-~   81 (259)
T COG0623           3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKK-K   81 (259)
T ss_pred             ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHH-h
Confidence            45789999998 5  58899999999999996444443322   1235777788766554432 23333333333332 2


Q ss_pred             CCCccEEEEccCCh-----------------------------HHHHHHHHhhcCCCEEEEEccCCC
Q 018075          249 GSGIDVSFDCVGFD-----------------------------KTMSTALNATRPGGKVCLIGLAKT  286 (361)
Q Consensus       249 ~~~~d~vld~~g~~-----------------------------~~~~~~~~~l~~~G~~v~~g~~~~  286 (361)
                      =+++|.++.+++..                             +..+.+...|.+||.++.+...+.
T Consensus        82 ~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs  148 (259)
T COG0623          82 WGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGS  148 (259)
T ss_pred             hCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccc
Confidence            35899998887654                             244556677899999998865443

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=94.79  E-value=0.43  Score=41.30  Aligned_cols=35  Identities=26%  Similarity=0.415  Sum_probs=30.4

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075          179 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  213 (361)
Q Consensus       179 g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~  213 (361)
                      ..+|+|+|+|++|..++..+-..|...+..+|.+.
T Consensus        11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~   45 (231)
T cd00755          11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDV   45 (231)
T ss_pred             CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCE
Confidence            46899999999999999999899998888887543

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK08226 short chain dehydrogenase; Provisional

Probab=94.79  E-value=0.28  Score=43.17  Aligned_cols=82  Identities=20%  Similarity=0.266  Sum_probs=50.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc---CCCE-EeecC-CCccchhHHHHHHHhhcCCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL---GADE-TAKVS-TDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l---g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~  251 (361)
                      ++.++||.| +|.+|...++.+...|+ .|+.++++.+..+.++++   +... .+..+ .+..+....+.++... ..+
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~~~   82 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEK-EGR   82 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHH-cCC
Confidence            467899998 69999999998888899 578887776544443332   3221 11111 1222333334333322 346


Q ss_pred             ccEEEEccCC
Q 018075          252 IDVSFDCVGF  261 (361)
Q Consensus       252 ~d~vld~~g~  261 (361)
                      +|++|.+.|.
T Consensus        83 id~vi~~ag~   92 (263)
T PRK08226         83 IDILVNNAGV   92 (263)
T ss_pred             CCEEEECCCc
Confidence            9999998874

>PLN02780 ketoreductase/ oxidoreductase

Probab=94.76  E-value=0.26  Score=45.03  Aligned_cols=80  Identities=18%  Similarity=0.295  Sum_probs=49.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHc----CCCE----EeecCCCccchhHHHHHHHhh
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL----GADE----TAKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l----g~~~----~~~~~~~~~~~~~~~~~~~~~  247 (361)
                      .|.++||.| ++++|.+.+..+...|+ .|+.+++++++.+.+ +++    +...    ..|...   +..+.+.++.+.
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~---~~~~~~~~l~~~  127 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG---DIDEGVKRIKET  127 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC---CcHHHHHHHHHH
Confidence            588999999 58999999887777899 577788888776533 222    1111    123221   222333333322


Q ss_pred             -cCCCccEEEEccCC
Q 018075          248 -MGSGIDVSFDCVGF  261 (361)
Q Consensus       248 -~~~~~d~vld~~g~  261 (361)
                       ++..+|+++++.|.
T Consensus       128 ~~~~didilVnnAG~  142 (320)
T PLN02780        128 IEGLDVGVLINNVGV  142 (320)
T ss_pred             hcCCCccEEEEecCc
Confidence             23357799998763

>PRK07890 short chain dehydrogenase; Provisional

Probab=94.76  E-value=0.28  Score=42.94  Aligned_cols=83  Identities=16%  Similarity=0.141  Sum_probs=50.7

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHc---CCC-EEeecC-CCccchhHHHHHHHhhcC
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---GAD-ETAKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~-~~~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      -++.++||.| +|++|...+..+...|+ .|+.+++++++.+.+ +++   +.. ..+..+ .+..+....+.++... -
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   80 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALER-F   80 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHH-c
Confidence            3568899998 59999999998888999 678887777654333 222   222 111111 2223333333333222 2


Q ss_pred             CCccEEEEccCC
Q 018075          250 SGIDVSFDCVGF  261 (361)
Q Consensus       250 ~~~d~vld~~g~  261 (361)
                      +++|+++.+.|.
T Consensus        81 g~~d~vi~~ag~   92 (258)
T PRK07890         81 GRVDALVNNAFR   92 (258)
T ss_pred             CCccEEEECCcc
Confidence            469999998864

>PRK06701 short chain dehydrogenase; Provisional

Probab=94.76  E-value=1  Score=40.36  Aligned_cols=107  Identities=17%  Similarity=0.139  Sum_probs=60.6

Q ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChh-HH----HHHHHcCCCE-EeecC-CCccchhHHHHHHHhh
Q 018075          176 VGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ-RL----SIARNLGADE-TAKVS-TDIEDVDTDVGKIQNA  247 (361)
Q Consensus       176 ~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~-~~----~~~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~  247 (361)
                      .-++.++||.| +|.+|...+..+...|+ .|+.+.++.+ ..    +.++..+... .+..+ .+.....+.+.++.+.
T Consensus        43 ~~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~  121 (290)
T PRK06701         43 KLKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRE  121 (290)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            34578999998 59999999998888899 5666655432 11    1222223221 11111 1222333334443332


Q ss_pred             cCCCccEEEEccCCh--------------------------HHHHHHHHhhcCCCEEEEEccC
Q 018075          248 MGSGIDVSFDCVGFD--------------------------KTMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       248 ~~~~~d~vld~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~~  284 (361)
                       -.++|++|.+.|..                          ...+.+.+.+.+.|+++.++..
T Consensus       122 -~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~  183 (290)
T PRK06701        122 -LGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSI  183 (290)
T ss_pred             -cCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecc
Confidence             24799999987642                          0122334455677899888753

>PRK11088 rrmA 23S rRNA methyltransferase A; Provisional

Probab=94.75  E-value=0.25  Score=44.03  Aligned_cols=95  Identities=15%  Similarity=0.165  Sum_probs=63.4

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcC---CCEEEEEeCChhHHHHHHHcCCC-EEeecCCCccchhHHHHHHHhhcCCCc
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFG---APRIIITDVDVQRLSIARNLGAD-ETAKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g---~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      .++++||-+|||. |..+..+++...   ...++++|.+++..+.+++.... ....  .+..+..     +   ....+
T Consensus        84 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~~~~~v~giD~s~~~l~~A~~~~~~~~~~~--~d~~~lp-----~---~~~sf  152 (272)
T PRK11088         84 EKATALLDIGCGE-GYYTHALADALPEITTMQLFGLDISKVAIKYAAKRYPQVTFCV--ASSHRLP-----F---ADQSL  152 (272)
T ss_pred             CCCCeEEEECCcC-CHHHHHHHHhcccccCCeEEEECCCHHHHHHHHHhCCCCeEEE--eecccCC-----C---cCCce
Confidence            4557788889876 777777776643   12589999999988887764321 1111  1101110     1   13569


Q ss_pred             cEEEEccCChHHHHHHHHhhcCCCEEEEEcc
Q 018075          253 DVSFDCVGFDKTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       253 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~  283 (361)
                      |+|+.... +....++.+.|+|||+++.+..
T Consensus       153 D~I~~~~~-~~~~~e~~rvLkpgG~li~~~p  182 (272)
T PRK11088        153 DAIIRIYA-PCKAEELARVVKPGGIVITVTP  182 (272)
T ss_pred             eEEEEecC-CCCHHHHHhhccCCCEEEEEeC
Confidence            99998665 4478899999999999998753

>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial

Probab=94.75  E-value=0.18  Score=48.63  Aligned_cols=77  Identities=21%  Similarity=0.337  Sum_probs=52.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh---------------------hHHHHHHHcCCCEEeecCCCccc
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV---------------------QRLSIARNLGADETAKVSTDIED  236 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~---------------------~~~~~~~~lg~~~~~~~~~~~~~  236 (361)
                      ++++|+|+|+|+.|+.++..++..|.+ |+..+..+                     ...+.++++|.+...+.... .+
T Consensus       140 ~~~~V~IIG~GpaGl~aA~~l~~~G~~-V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~-~~  217 (467)
T TIGR01318       140 TGKRVAVIGAGPAGLACADILARAGVQ-VVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVG-RD  217 (467)
T ss_pred             CCCeEEEECCCHHHHHHHHHHHHcCCe-EEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeC-Cc
Confidence            678999999999999999999999994 66665543                     24567778887654331110 11


Q ss_pred             hhHHHHHHHhhcCCCccEEEEccCCh
Q 018075          237 VDTDVGKIQNAMGSGIDVSFDCVGFD  262 (361)
Q Consensus       237 ~~~~~~~~~~~~~~~~d~vld~~g~~  262 (361)
                      .  .+.++.    .++|.||.++|..
T Consensus       218 ~--~~~~~~----~~~D~vilAtGa~  237 (467)
T TIGR01318       218 I--SLDDLL----EDYDAVFLGVGTY  237 (467)
T ss_pred             c--CHHHHH----hcCCEEEEEeCCC
Confidence            1  112221    3699999999875

This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=94.73  E-value=0.3  Score=42.81  Aligned_cols=82  Identities=13%  Similarity=0.183  Sum_probs=49.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChh--HHHHHHHcCCCE-EeecC-CCccchhHHHHHHHhhcCCCc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ--RLSIARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~--~~~~~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      +|.++||.| +|++|.+.++.+...|+ .|+.++.+..  ..+.+++.+... .+..+ .+.++....+.++... .+++
T Consensus         9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~~   86 (253)
T PRK08993          9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAE-FGHI   86 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-hCCC
Confidence            467899998 58999999998888999 5666655432  223333444221 11111 2233444445444432 2479


Q ss_pred             cEEEEccCC
Q 018075          253 DVSFDCVGF  261 (361)
Q Consensus       253 d~vld~~g~  261 (361)
                      |+++++.|.
T Consensus        87 D~li~~Ag~   95 (253)
T PRK08993         87 DILVNNAGL   95 (253)
T ss_pred             CEEEECCCC
Confidence            999998874

>PRK05854 short chain dehydrogenase; Provisional

Probab=94.72  E-value=0.31  Score=44.32  Aligned_cols=81  Identities=16%  Similarity=0.221  Sum_probs=49.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHc-----CCC-EE--eecCCCccchhHHHHHHHhh
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNL-----GAD-ET--AKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~l-----g~~-~~--~~~~~~~~~~~~~~~~~~~~  247 (361)
                      .|.+++|.| ++++|.+.+..+...|+ .|+.+.++.++.+ .++++     +.. ..  .|+ .+..+..+...++.. 
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl-~d~~sv~~~~~~~~~-   89 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDL-SSLASVAALGEQLRA-   89 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecC-CCHHHHHHHHHHHHH-
Confidence            468899998 58999999998888999 5777777766543 22222     111 11  122 222333333333332 


Q ss_pred             cCCCccEEEEccCC
Q 018075          248 MGSGIDVSFDCVGF  261 (361)
Q Consensus       248 ~~~~~d~vld~~g~  261 (361)
                      ...++|+++++.|.
T Consensus        90 ~~~~iD~li~nAG~  103 (313)
T PRK05854         90 EGRPIHLLINNAGV  103 (313)
T ss_pred             hCCCccEEEECCcc
Confidence            23579999998764

>PLN02928 oxidoreductase family protein

Probab=94.69  E-value=0.55  Score=43.41  Aligned_cols=98  Identities=20%  Similarity=0.286  Sum_probs=60.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCC-----CEEeecCCCccchhHHHHHHHhhcCCCc
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA-----DETAKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      .|.++.|+|.|.+|..+++.++.+|+ .|++.+++..+.. ...++.     ...........++.    ++.    ...
T Consensus       158 ~gktvGIiG~G~IG~~vA~~l~afG~-~V~~~dr~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~L~----ell----~~a  227 (347)
T PLN02928        158 FGKTVFILGYGAIGIELAKRLRPFGV-KLLATRRSWTSEP-EDGLLIPNGDVDDLVDEKGGHEDIY----EFA----GEA  227 (347)
T ss_pred             CCCEEEEECCCHHHHHHHHHHhhCCC-EEEEECCCCChhh-hhhhccccccccccccccCcccCHH----HHH----hhC
Confidence            57899999999999999999999999 6888877532211 111110     00000000011222    222    358


Q ss_pred             cEEEEccCChHH-----HHHHHHhhcCCCEEEEEccCC
Q 018075          253 DVSFDCVGFDKT-----MSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       253 d~vld~~g~~~~-----~~~~~~~l~~~G~~v~~g~~~  285 (361)
                      |+|+.+......     -...+..|+++..+|-++...
T Consensus       228 DiVvl~lPlt~~T~~li~~~~l~~Mk~ga~lINvaRG~  265 (347)
T PLN02928        228 DIVVLCCTLTKETAGIVNDEFLSSMKKGALLVNIARGG  265 (347)
T ss_pred             CEEEECCCCChHhhcccCHHHHhcCCCCeEEEECCCcc
Confidence            999997764322     245778899999888776554

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.69  E-value=0.35  Score=42.66  Aligned_cols=82  Identities=18%  Similarity=0.255  Sum_probs=48.5

Q ss_pred             CCCEEEEECC---CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecC-CCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMGS---GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G~---g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      ++.++||.|+   +++|.+.++.+...|+ .|+.+.+.+...+.+++    ++....+..+ .+.++..+.+.++.+. -
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~   82 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKH-W   82 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHH-h
Confidence            5778999983   5899999998888999 45555444332333333    3322222211 2333444445444432 2


Q ss_pred             CCccEEEEccCC
Q 018075          250 SGIDVSFDCVGF  261 (361)
Q Consensus       250 ~~~d~vld~~g~  261 (361)
                      +++|+++++.|.
T Consensus        83 g~iD~lVnnAG~   94 (261)
T PRK08690         83 DGLDGLVHSIGF   94 (261)
T ss_pred             CCCcEEEECCcc
Confidence            479999998864

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=94.68  E-value=0.37  Score=41.30  Aligned_cols=103  Identities=17%  Similarity=0.258  Sum_probs=60.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh------hHH-------------HHH----HHcCCC-EEeecCCC
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV------QRL-------------SIA----RNLGAD-ETAKVSTD  233 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~------~~~-------------~~~----~~lg~~-~~~~~~~~  233 (361)
                      +..+|+|.|.|++|.+++..+...|...+..+|.++      .|+             +.+    ++.+.. .+..++. 
T Consensus        29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~-  107 (263)
T COG1179          29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIND-  107 (263)
T ss_pred             hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHh-
Confidence            568999999999999999999999988888776543      122             111    112211 1111000 


Q ss_pred             ccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHH-hhcCCCEEEEEccCC
Q 018075          234 IEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALN-ATRPGGKVCLIGLAK  285 (361)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~-~l~~~G~~v~~g~~~  285 (361)
                       -=..+.+.++   ...++|+|+||..+-..--.++. +.+.+=.++..+..+
T Consensus       108 -f~t~en~~~~---~~~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Gag  156 (263)
T COG1179         108 -FITEENLEDL---LSKGFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGAG  156 (263)
T ss_pred             -hhCHhHHHHH---hcCCCCEEEEchhhhHHHHHHHHHHHHcCCCEEeecccc
Confidence             0011122222   35689999999986644444444 555555666665443

>PRK12829 short chain dehydrogenase; Provisional

Probab=94.68  E-value=0.29  Score=42.99  Aligned_cols=85  Identities=21%  Similarity=0.240  Sum_probs=52.7

Q ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH-cCCC--EEeecC-CCccchhHHHHHHHhhcCC
Q 018075          176 VGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGAD--ETAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       176 ~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~--~~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      .-++.++||.| +|.+|..+++.+...|. .|+.+.++.+..+.+.+ +.-.  ..+..+ .+..+..+.+.++... -.
T Consensus         8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   85 (264)
T PRK12829          8 PLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVER-FG   85 (264)
T ss_pred             ccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHH-hC
Confidence            35778999998 59999999999888999 57888777665544332 3221  112211 1222333333333322 24


Q ss_pred             CccEEEEccCCh
Q 018075          251 GIDVSFDCVGFD  262 (361)
Q Consensus       251 ~~d~vld~~g~~  262 (361)
                      ++|+||.+.|..
T Consensus        86 ~~d~vi~~ag~~   97 (264)
T PRK12829         86 GLDVLVNNAGIA   97 (264)
T ss_pred             CCCEEEECCCCC
Confidence            799999988743

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=94.66  E-value=0.26  Score=43.81  Aligned_cols=85  Identities=22%  Similarity=0.223  Sum_probs=52.3

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCC--EE--eecC-CCccchhHHHHHHHh
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGAD--ET--AKVS-TDIEDVDTDVGKIQN  246 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~--~~--~~~~-~~~~~~~~~~~~~~~  246 (361)
                      -.|..+||.| +.++|.+.+..+...|+ +|+.+.+++++.+...+    .+..  .+  +..+ .+..+..+.+....+
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~   84 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE   84 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence            3678889998 58999999999999999 67888787776543322    2221  11  1111 122233333333323


Q ss_pred             hcCCCccEEEEccCCh
Q 018075          247 AMGSGIDVSFDCVGFD  262 (361)
Q Consensus       247 ~~~~~~d~vld~~g~~  262 (361)
                      ...+++|+.+++.|..
T Consensus        85 ~~~GkidiLvnnag~~  100 (270)
T KOG0725|consen   85 KFFGKIDILVNNAGAL  100 (270)
T ss_pred             HhCCCCCEEEEcCCcC
Confidence            2246899999988754

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=94.64  E-value=0.54  Score=38.46  Aligned_cols=88  Identities=14%  Similarity=0.195  Sum_probs=56.0

Q ss_pred             HHHHHHHh-cCCCCCCEEEEECCCH-HHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHH
Q 018075          166 VGVHACRR-ANVGPETNVMIMGSGP-IGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK  243 (361)
Q Consensus       166 ~a~~~l~~-~~~~~g~~vlI~G~g~-~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~  243 (361)
                      .+...++. ..--.|.++||+|+|. +|..++..++..|+ .+..+.+..+                     +..+.   
T Consensus        30 a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~~---------------------~l~~~---   84 (168)
T cd01080          30 GILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKTK---------------------NLKEH---   84 (168)
T ss_pred             HHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCch---------------------hHHHH---
Confidence            34444554 3346899999999986 59989999999999 5666654421                     11111   


Q ss_pred             HHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCC
Q 018075          244 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       244 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~  285 (361)
                      +     ..+|+||.+++.+..+..  +.+.++-.++.++.+.
T Consensus        85 l-----~~aDiVIsat~~~~ii~~--~~~~~~~viIDla~pr  119 (168)
T cd01080          85 T-----KQADIVIVAVGKPGLVKG--DMVKPGAVVIDVGINR  119 (168)
T ss_pred             H-----hhCCEEEEcCCCCceecH--HHccCCeEEEEccCCC
Confidence            1     468999999998742222  3466665555665443

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=94.63  E-value=0.84  Score=41.65  Aligned_cols=90  Identities=21%  Similarity=0.291  Sum_probs=61.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      .|.++.|+|.|.+|++.++.++..|. .|+.-+++.. .+..+++++.+.        ++.+.+        ...|++.-
T Consensus       145 ~gktvGIiG~GrIG~avA~r~~~Fgm-~v~y~~~~~~-~~~~~~~~~~y~--------~l~ell--------~~sDii~l  206 (324)
T COG1052         145 RGKTLGIIGLGRIGQAVARRLKGFGM-KVLYYDRSPN-PEAEKELGARYV--------DLDELL--------AESDIISL  206 (324)
T ss_pred             CCCEEEEECCCHHHHHHHHHHhcCCC-EEEEECCCCC-hHHHhhcCceec--------cHHHHH--------HhCCEEEE
Confidence            48999999999999999999999999 6788877765 444455555442        122222        34677755


Q ss_pred             -ccCChHH----HHHHHHhhcCCCEEEEEccCC
Q 018075          258 -CVGFDKT----MSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       258 -~~g~~~~----~~~~~~~l~~~G~~v~~g~~~  285 (361)
                       |-.++++    -...+..|++++.+|-++...
T Consensus       207 ~~Plt~~T~hLin~~~l~~mk~ga~lVNtaRG~  239 (324)
T COG1052         207 HCPLTPETRHLINAEELAKMKPGAILVNTARGG  239 (324)
T ss_pred             eCCCChHHhhhcCHHHHHhCCCCeEEEECCCcc
Confidence             4444432    123667899999888776554

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=94.63  E-value=0.7  Score=40.64  Aligned_cols=105  Identities=14%  Similarity=0.178  Sum_probs=60.0

Q ss_pred             CCCEEEEECC---CHHHHHHHHHHHHcCCCEEEEEeCC------hhHHHHHHHcCC-CEEeecC-CCccchhHHHHHHHh
Q 018075          178 PETNVMIMGS---GPIGLVTLLAARAFGAPRIIITDVD------VQRLSIARNLGA-DETAKVS-TDIEDVDTDVGKIQN  246 (361)
Q Consensus       178 ~g~~vlI~G~---g~~G~~ai~la~~~g~~~vv~v~~~------~~~~~~~~~lg~-~~~~~~~-~~~~~~~~~~~~~~~  246 (361)
                      .|.++||.|+   +++|.+.+..+...|++ |+.+..+      ++..+.+.+.+. ...+..+ .+.++..+.+.++.+
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~   83 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGAE-LGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ   83 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCCE-EEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence            4688999984   59999999988889995 5544322      122222222221 1112111 223344444444433


Q ss_pred             hcCCCccEEEEccCCh--------------H---------------HHHHHHHhhcCCCEEEEEccC
Q 018075          247 AMGSGIDVSFDCVGFD--------------K---------------TMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       247 ~~~~~~d~vld~~g~~--------------~---------------~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      . -+++|+++++.|..              +               ..+.+++.|..+|+++.++..
T Consensus        84 ~-~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~  149 (258)
T PRK07370         84 K-WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYL  149 (258)
T ss_pred             H-cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecc
Confidence            2 24799999988731              0               123455667778999887643

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=94.62  E-value=0.43  Score=47.67  Aligned_cols=94  Identities=15%  Similarity=0.084  Sum_probs=68.1

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEcc
Q 018075          180 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV  259 (361)
Q Consensus       180 ~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  259 (361)
                      ++|+|.|.|.+|+..++.++..|. .++++|.++++.+.+++.|...+.- +..+.   +.+   .+.+-..+|.++-+.
T Consensus       401 ~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~G-Dat~~---~~L---~~agi~~A~~vv~~~  472 (601)
T PRK03659        401 PQVIIVGFGRFGQVIGRLLMANKM-RITVLERDISAVNLMRKYGYKVYYG-DATQL---ELL---RAAGAEKAEAIVITC  472 (601)
T ss_pred             CCEEEecCchHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhCCCeEEEe-eCCCH---HHH---HhcCCccCCEEEEEe
Confidence            689999999999999999999999 5999999999999999988654332 22111   222   223456899999999


Q ss_pred             CChHHHHH---HHHhhcCCCEEEEE
Q 018075          260 GFDKTMST---ALNATRPGGKVCLI  281 (361)
Q Consensus       260 g~~~~~~~---~~~~l~~~G~~v~~  281 (361)
                      ++++.-..   ..+.+.|..+++.-
T Consensus       473 ~d~~~n~~i~~~~r~~~p~~~IiaR  497 (601)
T PRK03659        473 NEPEDTMKIVELCQQHFPHLHILAR  497 (601)
T ss_pred             CCHHHHHHHHHHHHHHCCCCeEEEE
Confidence            97643222   34566777777653

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=94.62  E-value=0.55  Score=40.58  Aligned_cols=33  Identities=21%  Similarity=0.348  Sum_probs=29.4

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeC
Q 018075          179 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDV  211 (361)
Q Consensus       179 g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~  211 (361)
                      ..+|+|.|+|++|..++..+...|...+..+|.
T Consensus        21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~   53 (228)
T cd00757          21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDD   53 (228)
T ss_pred             CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcC
Confidence            579999999999999999999999988888854

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=94.61  E-value=0.41  Score=41.86  Aligned_cols=82  Identities=21%  Similarity=0.305  Sum_probs=50.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HHH---cCCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARN---LGADE-TAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~---lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      ++.++||.| +|.+|...++.+...|+ .|+.+++++++.+. .++   .|... .+..+ .+..+......++.. .-.
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~   86 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEA-EIG   86 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHH-hcC
Confidence            578999998 59999999998888899 57778777665432 222   23211 11111 222333333333332 235


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|++|.+.|.
T Consensus        87 ~~d~li~~ag~   97 (255)
T PRK07523         87 PIDILVNNAGM   97 (255)
T ss_pred             CCCEEEECCCC
Confidence            79999998874

>PRK05876 short chain dehydrogenase; Provisional

Probab=94.61  E-value=0.3  Score=43.46  Aligned_cols=82  Identities=28%  Similarity=0.356  Sum_probs=50.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHc---CCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNL---GADE-TAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~l---g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      ++.++||.| +|++|.+.+..+...|+ .|+.++++.++.+ .++++   +... .+..+ .+..+..+.+.++.+. -+
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g   82 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRL-LG   82 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHH-cC
Confidence            467899998 69999999998888999 5777777765543 22232   3221 11111 2223333334333322 24


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|+++++.|.
T Consensus        83 ~id~li~nAg~   93 (275)
T PRK05876         83 HVDVVFSNAGI   93 (275)
T ss_pred             CCCEEEECCCc
Confidence            69999998873

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=94.60  E-value=0.35  Score=42.30  Aligned_cols=82  Identities=20%  Similarity=0.326  Sum_probs=51.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-H---HHcCCC-EEeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-A---RNLGAD-ETAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~---~~lg~~-~~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      ++.++||.| +|.+|...+..+...|+ .|+.++++.++.+. +   ++.+.. ..+..+ .+..+....+.++.... +
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~   87 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEH-G   87 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc-C
Confidence            578999998 59999999998878899 67888787665432 2   233321 112111 22333444444443322 4


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|.++.+.|.
T Consensus        88 ~id~vi~~ag~   98 (256)
T PRK06124         88 RLDILVNNVGA   98 (256)
T ss_pred             CCCEEEECCCC
Confidence            68999998874

>PRK12743 oxidoreductase; Provisional

Probab=94.60  E-value=0.3  Score=42.82  Aligned_cols=81  Identities=20%  Similarity=0.218  Sum_probs=47.5

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEE-eCChhHHH----HHHHcCCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075          179 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIIT-DVDVQRLS----IARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       179 g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v-~~~~~~~~----~~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      +.++||.| +|++|..+++.+...|++ |+.+ .++.++.+    .+++.+... .+..+ .+..+....+.++.+. -.
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~   79 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFD-IGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQR-LG   79 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence            46899998 589999999999889995 5544 44444332    223344322 22111 2223333444444332 24


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|+++.+.|.
T Consensus        80 ~id~li~~ag~   90 (256)
T PRK12743         80 RIDVLVNNAGA   90 (256)
T ss_pred             CCCEEEECCCC
Confidence            79999998874

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=94.60  E-value=0.43  Score=44.68  Aligned_cols=35  Identities=31%  Similarity=0.439  Sum_probs=31.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  212 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~  212 (361)
                      .+.+|+|+|+|++|..++..+...|...+..+|.+
T Consensus       134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD  168 (376)
T ss_pred             hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            56789999999999999999999999889999876

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=94.57  E-value=0.44  Score=47.20  Aligned_cols=93  Identities=12%  Similarity=0.135  Sum_probs=64.2

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEcc
Q 018075          180 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV  259 (361)
Q Consensus       180 ~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  259 (361)
                      ++++|.|+|.+|+..++.++..|. .++++|.++++.+.+++.|...+.- +..  + .+.+++   .+-..+|.++-+.
T Consensus       418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~G-D~~--~-~~~L~~---a~i~~a~~viv~~  489 (558)
T PRK10669        418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLG-NAA--N-EEIMQL---AHLDCARWLLLTI  489 (558)
T ss_pred             CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEc-CCC--C-HHHHHh---cCccccCEEEEEc
Confidence            788999999999999999999998 5899999999999999888655432 221  1 222322   2346899888777


Q ss_pred             CChHH---HHHHHHhhcCCCEEEE
Q 018075          260 GFDKT---MSTALNATRPGGKVCL  280 (361)
Q Consensus       260 g~~~~---~~~~~~~l~~~G~~v~  280 (361)
                      +++..   .-...+...+..+++.
T Consensus       490 ~~~~~~~~iv~~~~~~~~~~~iia  513 (558)
T PRK10669        490 PNGYEAGEIVASAREKRPDIEIIA  513 (558)
T ss_pred             CChHHHHHHHHHHHHHCCCCeEEE
Confidence            65432   1123455556666554

>TIGR02072 BioC biotin biosynthesis protein BioC

Probab=94.56  E-value=0.48  Score=40.91  Aligned_cols=98  Identities=17%  Similarity=0.295  Sum_probs=61.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  256 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  256 (361)
                      ..+.+||-+|+|. |.....+++......+++++.+++..+.+++.....+....   .+...    .. .....+|+|+
T Consensus        33 ~~~~~vLDlG~G~-G~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~---~d~~~----~~-~~~~~fD~vi  103 (240)
T TIGR02072        33 FIPASVLDIGCGT-GYLTRALLKRFPQAEFIALDISAGMLAQAKTKLSENVQFIC---GDAEK----LP-LEDSSFDLIV  103 (240)
T ss_pred             CCCCeEEEECCCc-cHHHHHHHHhCCCCcEEEEeChHHHHHHHHHhcCCCCeEEe---cchhh----CC-CCCCceeEEE
Confidence            3457888889866 66677777765444689999998887777664322111111   11111    10 0135699998


Q ss_pred             Ecc------CChHHHHHHHHhhcCCCEEEEEcc
Q 018075          257 DCV------GFDKTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       257 d~~------g~~~~~~~~~~~l~~~G~~v~~g~  283 (361)
                      ...      .....+..+.+.|+++|.++....
T Consensus       104 ~~~~l~~~~~~~~~l~~~~~~L~~~G~l~~~~~  136 (240)
T TIGR02072       104 SNLALQWCDDLSQALSELARVLKPGGLLAFSTF  136 (240)
T ss_pred             EhhhhhhccCHHHHHHHHHHHcCCCcEEEEEeC
Confidence            753      223467888899999999987653

This enzyme, which is found in biotin biosynthetic gene clusters in proteobacteria, firmicutes, green-sulfur bacteria, fusobacterium and bacteroides, is believed to carry out an enzymatic step prior to the formation of pimeloyl-CoA (although attribution of this annotation is not traceable). The enzyme appears related to methyltransferases by homology.

>PRK06141 ornithine cyclodeaminase; Validated

Probab=94.54  E-value=0.72  Score=41.99  Aligned_cols=101  Identities=17%  Similarity=0.214  Sum_probs=62.2

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHH-HHHcCCCEEEEEeCChhHHH-HHHHcCCC--EEeecCCCccchhHHHHHHHhh
Q 018075          172 RRANVGPETNVMIMGSGPIGLVTLLA-ARAFGAPRIIITDVDVQRLS-IARNLGAD--ETAKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       172 ~~~~~~~g~~vlI~G~g~~G~~ai~l-a~~~g~~~vv~v~~~~~~~~-~~~~lg~~--~~~~~~~~~~~~~~~~~~~~~~  247 (361)
                      +...-+...+++|+|+|..|...+.. +...+.+.|.+.+++.++.+ +++++...  .+...    .+..+.+      
T Consensus       118 ~~La~~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~~~~----~~~~~av------  187 (314)
T PRK06141        118 SYLARKDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDAEVV----TDLEAAV------  187 (314)
T ss_pred             HHhCCCCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEe----CCHHHHH------
Confidence            33333567899999999999988764 44467778888888887754 44444321  11111    1222221      


Q ss_pred             cCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCC
Q 018075          248 MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       248 ~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~  285 (361)
                        .+.|+|+.+.++..-+ ---+.+++|-.+..+|...
T Consensus       188 --~~aDIVi~aT~s~~pv-l~~~~l~~g~~i~~ig~~~  222 (314)
T PRK06141        188 --RQADIISCATLSTEPL-VRGEWLKPGTHLDLVGNFT  222 (314)
T ss_pred             --hcCCEEEEeeCCCCCE-ecHHHcCCCCEEEeeCCCC
Confidence              4799999988765210 1125688888777777543

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=94.53  E-value=0.46  Score=41.74  Aligned_cols=79  Identities=27%  Similarity=0.307  Sum_probs=48.9

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHc---CCCEEeecC-CCccchhHHHHHHHhhcCCCccE
Q 018075          181 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---GADETAKVS-TDIEDVDTDVGKIQNAMGSGIDV  254 (361)
Q Consensus       181 ~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~  254 (361)
                      ++||.| ++++|.+.++.+...|+ .|+.+++++++.+.+ +++   +....+..+ .+.++..+.+.++.+. -.++|+
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~-~g~id~   79 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWEL-LGGIDA   79 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHh-cCCCCE
Confidence            689998 58999999998888999 577777877654322 222   311222222 2223344444444332 247999


Q ss_pred             EEEccCC
Q 018075          255 SFDCVGF  261 (361)
Q Consensus       255 vld~~g~  261 (361)
                      ++++.|.
T Consensus        80 li~naG~   86 (259)
T PRK08340         80 LVWNAGN   86 (259)
T ss_pred             EEECCCC
Confidence            9998874

>PRK12744 short chain dehydrogenase; Provisional

Probab=94.53  E-value=0.62  Score=40.82  Aligned_cols=83  Identities=18%  Similarity=0.154  Sum_probs=45.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCC---hhH-HHHHH---HcCCCE-EeecC-CCccchhHHHHHHHhh
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVD---VQR-LSIAR---NLGADE-TAKVS-TDIEDVDTDVGKIQNA  247 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~---~~~-~~~~~---~lg~~~-~~~~~-~~~~~~~~~~~~~~~~  247 (361)
                      .+.++||.| +|++|.+.++.+...|++.++...+.   .+. .+.++   ..+... .+..+ .+..+..+.+.++.. 
T Consensus         7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-   85 (257)
T PRK12744          7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKA-   85 (257)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHH-
Confidence            467899998 59999999998888899634333221   121 22222   233321 11111 122233333333322 


Q ss_pred             cCCCccEEEEccCC
Q 018075          248 MGSGIDVSFDCVGF  261 (361)
Q Consensus       248 ~~~~~d~vld~~g~  261 (361)
                      ...++|+++.+.|.
T Consensus        86 ~~~~id~li~~ag~   99 (257)
T PRK12744         86 AFGRPDIAINTVGK   99 (257)
T ss_pred             hhCCCCEEEECCcc
Confidence            12479999998885

>PRK09291 short chain dehydrogenase; Provisional

Probab=94.52  E-value=0.14  Score=44.81  Aligned_cols=75  Identities=20%  Similarity=0.244  Sum_probs=45.9

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHH----HcCCCE-EeecCCCccchhHHHHHHHhhcCCCc
Q 018075          179 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGADE-TAKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       179 g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      +.++||.| +|.+|..+++.+...|+ .|+++.++.++.+.+.    ..+... .+.  .+-.+.. .+...   ...++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~--~D~~~~~-~~~~~---~~~~i   74 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEK--LDLTDAI-DRAQA---AEWDV   74 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEE--eeCCCHH-HHHHH---hcCCC
Confidence            45799998 59999999999988998 5777777665543332    223221 111  1112222 22222   13489


Q ss_pred             cEEEEccC
Q 018075          253 DVSFDCVG  260 (361)
Q Consensus       253 d~vld~~g  260 (361)
                      |++|.+.|
T Consensus        75 d~vi~~ag   82 (257)
T PRK09291         75 DVLLNNAG   82 (257)
T ss_pred             CEEEECCC
Confidence            99999887

>TIGR01934 MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis methyltransferases

Probab=94.50  E-value=0.46  Score=40.56  Aligned_cols=105  Identities=15%  Similarity=0.252  Sum_probs=66.4

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEeCChhHHHHHHHcCC--CEEeecCCCccchhHHHHHHHhhc
Q 018075          172 RRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARNLGA--DETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       172 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~lg~--~~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      +.....++.+||-+|+|. |..+..+++..+. ..+++++.++...+.+++...  ..+....   .+..+.    . ..
T Consensus        33 ~~~~~~~~~~vldiG~G~-G~~~~~~~~~~~~~~~~~~iD~~~~~~~~~~~~~~~~~~i~~~~---~d~~~~----~-~~  103 (223)
T TIGR01934        33 KLIGVFKGQKVLDVACGT-GDLAIELAKSAPDRGKVTGVDFSSEMLEVAKKKSELPLNIEFIQ---ADAEAL----P-FE  103 (223)
T ss_pred             HHhccCCCCeEEEeCCCC-ChhHHHHHHhcCCCceEEEEECCHHHHHHHHHHhccCCCceEEe---cchhcC----C-CC
Confidence            344456889999999876 7777777877763 369999999888777766432  1111101   111111    0 01


Q ss_pred             CCCccEEEEccC------ChHHHHHHHHhhcCCCEEEEEccCC
Q 018075          249 GSGIDVSFDCVG------FDKTMSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       249 ~~~~d~vld~~g------~~~~~~~~~~~l~~~G~~v~~g~~~  285 (361)
                      ...+|+|+...+      ....++.+.+.|++||+++.++...
T Consensus       104 ~~~~D~i~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~  146 (223)
T TIGR01934       104 DNSFDAVTIAFGLRNVTDIQKALREMYRVLKPGGRLVILEFSK  146 (223)
T ss_pred             CCcEEEEEEeeeeCCcccHHHHHHHHHHHcCCCcEEEEEEecC
Confidence            346999875432      1246788889999999999877543

Note that a number of non-orthologous genes which are members of pfam03737 have been erroneously annotated as MenG methyltransferases.

>TIGR00091 tRNA (guanine-N(7)-)-methyltransferase

Probab=94.50  E-value=0.8  Score=38.45  Aligned_cols=98  Identities=13%  Similarity=0.135  Sum_probs=62.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHH----HcCCCEEeecCCCccchhHHHHHHHhhcCCCcc
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGADETAKVSTDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      ...++|-+|||. |..+..+++......+++++.+++..+.++    +.+...+....   .+..+......  ....+|
T Consensus        16 ~~~~ilDiGcG~-G~~~~~la~~~p~~~v~gvD~~~~~l~~a~~~~~~~~l~ni~~i~---~d~~~~~~~~~--~~~~~d   89 (194)
T TIGR00091        16 KAPLHLEIGCGK-GRFLIDMAKQNPDKNFLGIEIHTPIVLAANNKANKLGLKNLHVLC---GDANELLDKFF--PDGSLS   89 (194)
T ss_pred             CCceEEEeCCCc-cHHHHHHHHhCCCCCEEEEEeeHHHHHHHHHHHHHhCCCCEEEEc---cCHHHHHHhhC--CCCcee
Confidence            345677789887 888889998875447999999998665543    33433322211   23322222111  123688


Q ss_pred             EEEEccCC--------------hHHHHHHHHhhcCCCEEEEE
Q 018075          254 VSFDCVGF--------------DKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       254 ~vld~~g~--------------~~~~~~~~~~l~~~G~~v~~  281 (361)
                      .++-..+.              +..++.+.+.|++||.+...
T Consensus        90 ~v~~~~pdpw~k~~h~~~r~~~~~~l~~~~r~LkpgG~l~~~  131 (194)
T TIGR00091        90 KVFLNFPDPWPKKRHNKRRITQPHFLKEYANVLKKGGVIHFK  131 (194)
T ss_pred             EEEEECCCcCCCCCccccccCCHHHHHHHHHHhCCCCEEEEE
Confidence            88765433              24688899999999999765

In E. coli, this protein flanks the DNA repair protein MutY, also called micA.

>PRK05717 oxidoreductase; Validated

Probab=94.49  E-value=0.47  Score=41.54  Aligned_cols=83  Identities=19%  Similarity=0.242  Sum_probs=50.5

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHH-HHHHHcCCCE-EeecC-CCccchhHHHHHHHhhcCCCc
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRL-SIARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~-~~~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      .+|.++||.| +|.+|..++..+...|+ .|+.++++.++. +..++++... .+..+ .+..+..+.+.++.+. -+++
T Consensus         8 ~~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~g~i   85 (255)
T PRK05717          8 HNGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQ-FGRL   85 (255)
T ss_pred             cCCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHH-hCCC
Confidence            3578899998 69999999998888898 577776665543 3344454321 11111 1222333333443322 2469


Q ss_pred             cEEEEccCC
Q 018075          253 DVSFDCVGF  261 (361)
Q Consensus       253 d~vld~~g~  261 (361)
                      |+++.+.|.
T Consensus        86 d~li~~ag~   94 (255)
T PRK05717         86 DALVCNAAI   94 (255)
T ss_pred             CEEEECCCc
Confidence            999998874

>PRK06194 hypothetical protein; Provisional

Probab=94.48  E-value=0.47  Score=42.33  Aligned_cols=82  Identities=20%  Similarity=0.344  Sum_probs=49.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHc---CCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNL---GADE-TAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~l---g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      ++.++||.| +|++|...+..+...|+ .|+.++++.++.+ ..+++   +... .+..+ .+..++.+.+..+.+. .+
T Consensus         5 ~~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~-~g   82 (287)
T PRK06194          5 AGKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALER-FG   82 (287)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence            357899998 69999999998888899 5777777765443 22322   3221 12111 1222333333333221 24


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|+++++.|.
T Consensus        83 ~id~vi~~Ag~   93 (287)
T PRK06194         83 AVHLLFNNAGV   93 (287)
T ss_pred             CCCEEEECCCC
Confidence            68999998875

>TIGR02992 ectoine_eutC ectoine utilization protein EutC

Probab=94.47  E-value=0.8  Score=41.93  Aligned_cols=94  Identities=21%  Similarity=0.214  Sum_probs=60.7

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEEeCChhHHH-HHHHc----CCCEEeecCCCccchhHHHHHHHhhcCC
Q 018075          177 GPETNVMIMGSGPIGLVTLLAAR-AFGAPRIIITDVDVQRLS-IARNL----GADETAKVSTDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~-~~g~~~vv~v~~~~~~~~-~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (361)
                      +...+++|+|+|..+.+.+..+. ..+.+.+....++.++.+ +++++    +.. +..+    .+..+.+        .
T Consensus       127 ~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~----~~~~~av--------~  193 (326)
T TIGR02992       127 EDSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAA----TDPRAAM--------S  193 (326)
T ss_pred             CCCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEe----CCHHHHh--------c
Confidence            45578999999999987777665 578878888888887755 44444    322 1111    1222221        4


Q ss_pred             CccEEEEccCChHHHHHHHHhhcCCCEEEEEccC
Q 018075          251 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       251 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      +.|+|+.|.+... .--....++++-++..+|..
T Consensus       194 ~aDiVvtaT~s~~-p~i~~~~l~~g~~i~~vg~~  226 (326)
T TIGR02992       194 GADIIVTTTPSET-PILHAEWLEPGQHVTAMGSD  226 (326)
T ss_pred             cCCEEEEecCCCC-cEecHHHcCCCcEEEeeCCC
Confidence            7999999887642 11112457888888888854

Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=94.46  E-value=1.1  Score=41.10  Aligned_cols=88  Identities=19%  Similarity=0.162  Sum_probs=59.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      .|.+|.|+|.|.+|...++.++..|. .|++.+.+.+.....    .    .+.   .++.+    +    -...|+|+-
T Consensus       145 ~g~~VgIIG~G~IG~~vA~~L~~~G~-~V~~~d~~~~~~~~~----~----~~~---~~l~e----l----l~~aDiVil  204 (330)
T PRK12480        145 KNMTVAIIGTGRIGAATAKIYAGFGA-TITAYDAYPNKDLDF----L----TYK---DSVKE----A----IKDADIISL  204 (330)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCChhHhhhh----h----hcc---CCHHH----H----HhcCCEEEE
Confidence            57789999999999999999999999 688888776542210    0    010   12222    2    146899998


Q ss_pred             ccCChHH-----HHHHHHhhcCCCEEEEEccCC
Q 018075          258 CVGFDKT-----MSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       258 ~~g~~~~-----~~~~~~~l~~~G~~v~~g~~~  285 (361)
                      +......     ....+..|+++..++-++...
T Consensus       205 ~lP~t~~t~~li~~~~l~~mk~gavlIN~aRG~  237 (330)
T PRK12480        205 HVPANKESYHLFDKAMFDHVKKGAILVNAARGA  237 (330)
T ss_pred             eCCCcHHHHHHHhHHHHhcCCCCcEEEEcCCcc
Confidence            8875532     234667889998887776554

>COG0334 GdhA Glutamate dehydrogenase/leucine dehydrogenase [Amino acid transport and metabolism]

Probab=94.44  E-value=0.73  Score=42.84  Aligned_cols=45  Identities=16%  Similarity=0.197  Sum_probs=34.6

Q ss_pred             HHHHhcCC-CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChh
Q 018075          169 HACRRANV-GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ  214 (361)
Q Consensus       169 ~~l~~~~~-~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~  214 (361)
                      .+++..+. -+|.+|.|.|.|.+|+.+++.+...|+ +|++++-++.
T Consensus       196 ~a~~~~g~~l~G~rVaVQG~GNVg~~aa~~l~~~GA-kvva~sds~g  241 (411)
T COG0334         196 EALKALGDDLEGARVAVQGFGNVGQYAAEKLHELGA-KVVAVSDSKG  241 (411)
T ss_pred             HHHHHcCCCcCCCEEEEECccHHHHHHHHHHHHcCC-EEEEEEcCCC
Confidence            44455444 599999999999999999999998999 4666654443

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=94.43  E-value=0.35  Score=45.65  Aligned_cols=38  Identities=21%  Similarity=0.417  Sum_probs=31.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHH
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRL  216 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~  216 (361)
                      +|.+++|.| +|++|.+.++.+...|+ .|+.+++++++.
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l  215 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKI  215 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHH
Confidence            478999998 59999999998888899 677777776654

>PRK13256 thiopurine S-methyltransferase; Reviewed

Probab=94.42  E-value=0.5  Score=40.64  Aligned_cols=105  Identities=10%  Similarity=0.036  Sum_probs=62.5

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH-cCCCEEee-------cC-----CCccchhHH
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADETAK-------VS-----TDIEDVDTD  240 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~-------~~-----~~~~~~~~~  240 (361)
                      ....++.+|||-|||- |.-++-||. .|. .|++++-++...+.+.+ .+....+.       +.     --..|+-+.
T Consensus        39 l~~~~~~rvLvPgCGk-g~D~~~LA~-~G~-~V~GvDlS~~Ai~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~gD~f~l  115 (226)
T PRK13256         39 LNINDSSVCLIPMCGC-SIDMLFFLS-KGV-KVIGIELSEKAVLSFFSQNTINYEVIHGNDYKLYKGDDIEIYVADIFNL  115 (226)
T ss_pred             cCCCCCCeEEEeCCCC-hHHHHHHHh-CCC-cEEEEecCHHHHHHHHHHcCCCcceecccccceeccCceEEEEccCcCC
Confidence            4455788999999987 777777766 688 59999999988776544 22211000       00     000121110


Q ss_pred             HHHHHhhcCCCccEEEEccC----Ch----HHHHHHHHhhcCCCEEEEEcc
Q 018075          241 VGKIQNAMGSGIDVSFDCVG----FD----KTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       241 ~~~~~~~~~~~~d~vld~~g----~~----~~~~~~~~~l~~~G~~v~~g~  283 (361)
                      -.  .......||.|+|..-    .+    .-.+.+.+.|+|+|+++.+..
T Consensus       116 ~~--~~~~~~~fD~VyDra~~~Alpp~~R~~Y~~~l~~lL~pgg~llll~~  164 (226)
T PRK13256        116 PK--IANNLPVFDIWYDRGAYIALPNDLRTNYAKMMLEVCSNNTQILLLVM  164 (226)
T ss_pred             Cc--cccccCCcCeeeeehhHhcCCHHHHHHHHHHHHHHhCCCcEEEEEEE
Confidence            00  0001246999999432    12    245567788999999988764

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=94.41  E-value=0.66  Score=41.99  Aligned_cols=89  Identities=15%  Similarity=0.155  Sum_probs=59.9

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      .-.|.+|.|+|.|.+|.+.++.++..|.+ |++.++.....+.++..|+..        .+..+.+        ...|+|
T Consensus        13 ~LkgKtVGIIG~GsIG~amA~nL~d~G~~-ViV~~r~~~s~~~A~~~G~~v--------~sl~Eaa--------k~ADVV   75 (335)
T PRK13403         13 LLQGKTVAVIGYGSQGHAQAQNLRDSGVE-VVVGVRPGKSFEVAKADGFEV--------MSVSEAV--------RTAQVV   75 (335)
T ss_pred             hhCcCEEEEEeEcHHHHHHHHHHHHCcCE-EEEEECcchhhHHHHHcCCEE--------CCHHHHH--------hcCCEE
Confidence            34789999999999999999999999995 555545455555666666532        1222222        468999


Q ss_pred             EEccCChHH---H-HHHHHhhcCCCEEEEE
Q 018075          256 FDCVGFDKT---M-STALNATRPGGKVCLI  281 (361)
Q Consensus       256 ld~~g~~~~---~-~~~~~~l~~~G~~v~~  281 (361)
                      +-++..+..   + ...+..|+++..++..
T Consensus        76 ~llLPd~~t~~V~~~eil~~MK~GaiL~f~  105 (335)
T PRK13403         76 QMLLPDEQQAHVYKAEVEENLREGQMLLFS  105 (335)
T ss_pred             EEeCCChHHHHHHHHHHHhcCCCCCEEEEC
Confidence            998876532   2 2356677887655443

>PRK06125 short chain dehydrogenase; Provisional

Probab=94.39  E-value=0.49  Score=41.51  Aligned_cols=79  Identities=22%  Similarity=0.316  Sum_probs=48.1

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHc----CCC-EEeecCCCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL----GAD-ETAKVSTDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l----g~~-~~~~~~~~~~~~~~~~~~~~~~~~~  250 (361)
                      ++.++||.| +|++|...++.+...|+ .|+.++++.++.+.+ +++    +.. ..+..+  ..+.. .+.++.+. -.
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D--~~~~~-~~~~~~~~-~g   80 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALD--LSSPE-AREQLAAE-AG   80 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEec--CCCHH-HHHHHHHH-hC
Confidence            478999998 58999999998888999 688887877655432 222    221 122111  11211 22222221 24


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|+++++.|.
T Consensus        81 ~id~lv~~ag~   91 (259)
T PRK06125         81 DIDILVNNAGA   91 (259)
T ss_pred             CCCEEEECCCC
Confidence            79999998874

>PLN03013 cysteine synthase

Probab=94.39  E-value=2.1  Score=40.61  Aligned_cols=57  Identities=19%  Similarity=0.336  Sum_probs=43.9

Q ss_pred             HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEe--CChhHHHHHHHcCCCEEe
Q 018075          172 RRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITD--VDVQRLSIARNLGADETA  228 (361)
Q Consensus       172 ~~~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~--~~~~~~~~~~~lg~~~~~  228 (361)
                      +.+.+++|.+.+|.. +|..|++.+..++.+|.+.++.+.  .+++|.+.++.+|++.+.
T Consensus       167 ~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~  226 (429)
T PLN03013        167 QKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVL  226 (429)
T ss_pred             HcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEE
Confidence            446678896666655 799999999999999997655553  456788888999987654

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.38  E-value=0.32  Score=42.34  Aligned_cols=83  Identities=18%  Similarity=0.213  Sum_probs=48.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HH---HHcCCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IA---RNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~---~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      ++.++||.| +|.+|...+..+...|+++++...++.++.+ ..   +..+... .+..+ .+..+....+.++.... .
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~   81 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEF-G   81 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence            467899998 5999999999888899954443455554432 22   2234321 11111 22233334444443322 4


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|++|.+.|.
T Consensus        82 ~id~vi~~ag~   92 (250)
T PRK08063         82 RLDVFVNNAAS   92 (250)
T ss_pred             CCCEEEECCCC
Confidence            69999998873

>PRK08643 acetoin reductase; Validated

Probab=94.38  E-value=0.49  Score=41.39  Aligned_cols=81  Identities=19%  Similarity=0.286  Sum_probs=49.2

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHc---CCCE-EeecC-CCccchhHHHHHHHhhcCCC
Q 018075          179 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---GADE-TAKVS-TDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       179 g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~  251 (361)
                      +.++||.| +|++|...++.+...|+ .|+.++++.++.+.+ .++   +... .+..+ .+.++..+.+.++.+. ..+
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~   79 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDT-FGD   79 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-cCC
Confidence            56889998 59999999998888999 577787776654322 222   2221 11111 2222333344444322 247


Q ss_pred             ccEEEEccCC
Q 018075          252 IDVSFDCVGF  261 (361)
Q Consensus       252 ~d~vld~~g~  261 (361)
                      +|+++.+.|.
T Consensus        80 id~vi~~ag~   89 (256)
T PRK08643         80 LNVVVNNAGV   89 (256)
T ss_pred             CCEEEECCCC
Confidence            9999998864

>PRK06482 short chain dehydrogenase; Provisional

Probab=94.36  E-value=0.41  Score=42.48  Aligned_cols=80  Identities=23%  Similarity=0.177  Sum_probs=49.0

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH-cCCC-EEeecC-CCccchhHHHHHHHhhcCCCccEE
Q 018075          180 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGAD-ETAKVS-TDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       180 ~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      .++||.| +|.+|...++.+...|. .|+.+.++.++.+.+++ .+.. ..+..+ .+..+..+.+.++.+ ...++|++
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~~id~v   80 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFA-ALGRIDVV   80 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHH-HcCCCCEE
Confidence            4789998 69999999998888898 67778788776655443 2321 111111 122223333333322 13578999


Q ss_pred             EEccCC
Q 018075          256 FDCVGF  261 (361)
Q Consensus       256 ld~~g~  261 (361)
                      |.+.|.
T Consensus        81 i~~ag~   86 (276)
T PRK06482         81 VSNAGY   86 (276)
T ss_pred             EECCCC
Confidence            998874

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=94.32  E-value=0.54  Score=41.21  Aligned_cols=82  Identities=21%  Similarity=0.286  Sum_probs=50.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHH----HcCCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      ++.++||.| +|.+|...++.+...|+ .|+.++++.++.+.+.    +.+... .+..+ .+..+..+.+.++.+. -.
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~-~~   88 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLER-FG   88 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH-hC
Confidence            578999998 59999999998888999 6788878776654332    222221 12111 1222333333333322 24


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|.++.+.|.
T Consensus        89 ~id~vi~~ag~   99 (259)
T PRK08213         89 HVDILVNNAGA   99 (259)
T ss_pred             CCCEEEECCCC
Confidence            79999998874

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=94.32  E-value=0.12  Score=40.11  Aligned_cols=80  Identities=18%  Similarity=0.181  Sum_probs=48.9

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEe-CChhHHHHHHH-cCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075          179 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITD-VDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  256 (361)
Q Consensus       179 g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~-~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  256 (361)
                      .-+|-|+|+|-+|......++..|. .|..+. ++.++.+.+.. ++.....++       .+    +    -...|++|
T Consensus        10 ~l~I~iIGaGrVG~~La~aL~~ag~-~v~~v~srs~~sa~~a~~~~~~~~~~~~-------~~----~----~~~aDlv~   73 (127)
T PF10727_consen   10 RLKIGIIGAGRVGTALARALARAGH-EVVGVYSRSPASAERAAAFIGAGAILDL-------EE----I----LRDADLVF   73 (127)
T ss_dssp             --EEEEECTSCCCCHHHHHHHHTTS-EEEEESSCHH-HHHHHHC--TT-----T-------TG----G----GCC-SEEE
T ss_pred             ccEEEEECCCHHHHHHHHHHHHCCC-eEEEEEeCCccccccccccccccccccc-------cc----c----cccCCEEE
Confidence            3578899999999999999999998 566664 44445554444 443332221       11    1    25699999


Q ss_pred             EccCChHHHHHHHHhhcCC
Q 018075          257 DCVGFDKTMSTALNATRPG  275 (361)
Q Consensus       257 d~~g~~~~~~~~~~~l~~~  275 (361)
                      -++..+ .+...+..|...
T Consensus        74 iavpDd-aI~~va~~La~~   91 (127)
T PF10727_consen   74 IAVPDD-AIAEVAEQLAQY   91 (127)
T ss_dssp             E-S-CC-HHHHHHHHHHCC
T ss_pred             EEechH-HHHHHHHHHHHh
Confidence            999976 788888777654

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>TIGR01532 E4PD_g-proteo D-erythrose-4-phosphate dehydrogenase

Probab=94.31  E-value=0.5  Score=43.08  Aligned_cols=102  Identities=22%  Similarity=0.251  Sum_probs=60.3

Q ss_pred             EEEEECCCHHHHHHHHHHHHcC----CCEEEEEeC--ChhHHHHHHHcCCCE------------EeecCCCccchh--HH
Q 018075          181 NVMIMGSGPIGLVTLLAARAFG----APRIIITDV--DVQRLSIARNLGADE------------TAKVSTDIEDVD--TD  240 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~g----~~~vv~v~~--~~~~~~~~~~lg~~~------------~~~~~~~~~~~~--~~  240 (361)
                      +|.|.|.|.+|..+.+.+...+    + .++++.-  +.+...++.++...+            .+.+....-.+.  +.
T Consensus         1 ~IaInGfGrIGR~vlr~l~e~~~~~~~-~vvaInd~~~~~~~ayll~yDS~hg~~~~~v~~~~~~l~v~g~~i~v~~~~~   79 (325)
T TIGR01532         1 RVAINGFGRIGRNVLRALYESGERLGI-EVVALNELADQASMAHLLRYDTSHGRFPGEVKVDGDCLHVNGDCIRVLHSPT   79 (325)
T ss_pred             CEEEECCCHHHHHHHHHHHhcCCCCCe-EEEEEecCCCHHHHHHHHhhCccCCCCCCcEEEeCCEEEECCeEEEEEEcCC
Confidence            4789999999999999877653    5 4555532  223333443333110            000000000000  01


Q ss_pred             HHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccC
Q 018075          241 VGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       241 ~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      ..++.. ...++|+||+|+|...+.+.+..++..|++.|.++.+
T Consensus        80 p~~~~w-~~~gvDiVie~tG~~~s~e~a~~~l~aGa~~V~~SaP  122 (325)
T TIGR01532        80 PEALPW-RALGVDLVLDCTGVYGNREQGERHIRAGAKRVLFSHP  122 (325)
T ss_pred             hhhccc-cccCCCEEEEccchhccHHHHHHHHHcCCeEEEecCC
Confidence            111111 2368999999999887888888999999999998855

Accordingly, this model is very close to the corresponding models for GAPDH, and those sequences which hit above trusted here invariably hit between trusted and noise to the GAPDH model (TIGR01534). Similarly, it may be found that there are species outside of the gamma proteobacteria which synthesize pyridoxine and have more than one aparrent GAPDH gene of which one may have E4PD activity - this may necessitate a readjustment of these models. Alternatively, some of the GAPDH enzymes may prove to be bifunctional in certain species.

>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=94.30  E-value=0.26  Score=49.65  Aligned_cols=77  Identities=23%  Similarity=0.301  Sum_probs=52.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChh---------------------HHHHHHHcCCCEEeecCCCccc
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ---------------------RLSIARNLGADETAKVSTDIED  236 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~---------------------~~~~~~~lg~~~~~~~~~~~~~  236 (361)
                      .+++|+|+|+|+.|+.++..++..|.+ |+..+..+.                     ..++++++|++...+..-. .+
T Consensus       309 ~~kkVaIIG~GpaGl~aA~~L~~~G~~-Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~-~~  386 (639)
T PRK12809        309 RSEKVAVIGAGPAGLGCADILARAGVQ-VDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIG-RD  386 (639)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHcCCc-EEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccC-Cc
Confidence            489999999999999999999999994 666765542                     4567777887654332110 11


Q ss_pred             hhHHHHHHHhhcCCCccEEEEccCCh
Q 018075          237 VDTDVGKIQNAMGSGIDVSFDCVGFD  262 (361)
Q Consensus       237 ~~~~~~~~~~~~~~~~d~vld~~g~~  262 (361)
                      .  .+.++    ..++|.||.++|..
T Consensus       387 ~--~~~~l----~~~~DaV~latGa~  406 (639)
T PRK12809        387 I--TFSDL----TSEYDAVFIGVGTY  406 (639)
T ss_pred             C--CHHHH----HhcCCEEEEeCCCC
Confidence            1  12222    24699999999864

>PRK06138 short chain dehydrogenase; Provisional

Probab=94.30  E-value=0.51  Score=41.06  Aligned_cols=82  Identities=22%  Similarity=0.296  Sum_probs=49.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHc--CCC-EEeecC-CCccchhHHHHHHHhhcCCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNL--GAD-ETAKVS-TDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~l--g~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~  251 (361)
                      ++.++||.| +|.+|...++.+...|+ .|+.+.++.++.+ ..+++  +.. ..+..+ .+..+..+.+.++.+. -++
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~-~~~   81 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAAR-WGR   81 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-cCC
Confidence            467899998 59999999997777898 5777777765443 23333  221 122111 1222333333333322 257


Q ss_pred             ccEEEEccCC
Q 018075          252 IDVSFDCVGF  261 (361)
Q Consensus       252 ~d~vld~~g~  261 (361)
                      +|+++.+.|.
T Consensus        82 id~vi~~ag~   91 (252)
T PRK06138         82 LDVLVNNAGF   91 (252)
T ss_pred             CCEEEECCCC
Confidence            9999998874

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=94.30  E-value=0.6  Score=40.91  Aligned_cols=82  Identities=18%  Similarity=0.332  Sum_probs=49.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HH---HHcCCCEE-eecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IA---RNLGADET-AKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~---~~lg~~~~-~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      ++.++||.| +|.+|...+..+...|+ .|+.+++++++.+ .+   ++.+.... +..+ .+..+..+.+.++... -.
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~   83 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAER-FG   83 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence            478999998 59999999998888999 5777777775443 22   33343321 1111 1222233333333221 24


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|+++.+.|.
T Consensus        84 ~~d~vi~~ag~   94 (262)
T PRK13394         84 SVDILVSNAGI   94 (262)
T ss_pred             CCCEEEECCcc
Confidence            68999998874

>PRK05875 short chain dehydrogenase; Provisional

Probab=94.30  E-value=0.54  Score=41.67  Aligned_cols=81  Identities=19%  Similarity=0.275  Sum_probs=48.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcC-----CC-EEeecC-CCccchhHHHHHHHhhc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLG-----AD-ETAKVS-TDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg-----~~-~~~~~~-~~~~~~~~~~~~~~~~~  248 (361)
                      ++.++||.| +|.+|...++.+...|+ .|+.++++.++.+ ..+++.     .. ..+..+ .+..+..+.+.+..+. 
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-   83 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW-   83 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH-
Confidence            468999999 59999999998888999 5777877765543 222221     11 111111 1222333333333221 


Q ss_pred             CCCccEEEEccC
Q 018075          249 GSGIDVSFDCVG  260 (361)
Q Consensus       249 ~~~~d~vld~~g  260 (361)
                      ..++|++|.+.|
T Consensus        84 ~~~~d~li~~ag   95 (276)
T PRK05875         84 HGRLHGVVHCAG   95 (276)
T ss_pred             cCCCCEEEECCC
Confidence            247899999887

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=94.28  E-value=0.35  Score=48.42  Aligned_cols=94  Identities=15%  Similarity=0.175  Sum_probs=66.4

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEc
Q 018075          179 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  258 (361)
Q Consensus       179 g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  258 (361)
                      .++|+|.|.|.+|+..++.++..|. .++++|.++++.+.+++.|...+.- +..+.   +.+   .+.+-..+|.++-+
T Consensus       400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~G-Dat~~---~~L---~~agi~~A~~vvv~  471 (621)
T PRK03562        400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFYG-DATRM---DLL---ESAGAAKAEVLINA  471 (621)
T ss_pred             cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEEE-eCCCH---HHH---HhcCCCcCCEEEEE
Confidence            3689999999999999999999999 5899999999999999988654322 22211   122   22245689999999


Q ss_pred             cCChHHHH---HHHHhhcCCCEEEE
Q 018075          259 VGFDKTMS---TALNATRPGGKVCL  280 (361)
Q Consensus       259 ~g~~~~~~---~~~~~l~~~G~~v~  280 (361)
                      .++++.-.   ...+.+.|+-+++.
T Consensus       472 ~~d~~~n~~i~~~ar~~~p~~~iia  496 (621)
T PRK03562        472 IDDPQTSLQLVELVKEHFPHLQIIA  496 (621)
T ss_pred             eCCHHHHHHHHHHHHHhCCCCeEEE
Confidence            98764322   23455566666544

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=94.27  E-value=0.42  Score=41.49  Aligned_cols=82  Identities=20%  Similarity=0.229  Sum_probs=47.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChh-HHHHHHH---cCCCEE---eecCCCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ-RLSIARN---LGADET---AKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~-~~~~~~~---lg~~~~---~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      ++..+||.| +|++|...++.+...|++.++...++.. +.+.+++   .+....   .+. .+..+..+.+.++.+. .
T Consensus         2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~   79 (246)
T PRK12938          2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNV-GDWDSTKAAFDKVKAE-V   79 (246)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCC-CCHHHHHHHHHHHHHH-h
Confidence            357889998 6999999999988899954333433332 2233332   343322   122 2223333444444332 2


Q ss_pred             CCccEEEEccCC
Q 018075          250 SGIDVSFDCVGF  261 (361)
Q Consensus       250 ~~~d~vld~~g~  261 (361)
                      +++|+++++.|.
T Consensus        80 ~~id~li~~ag~   91 (246)
T PRK12938         80 GEIDVLVNNAGI   91 (246)
T ss_pred             CCCCEEEECCCC
Confidence            579999999875

>PRK07074 short chain dehydrogenase; Provisional

Probab=94.26  E-value=0.5  Score=41.34  Aligned_cols=81  Identities=22%  Similarity=0.338  Sum_probs=48.6

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCC--EEeecC-CCccchhHHHHHHHhhcCCCcc
Q 018075          179 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGAD--ETAKVS-TDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       179 g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      +.++||.| +|.+|...+..+...|+ .|+.++++.++.+ +.+++...  ..+..+ .+.++....+.++... -+++|
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~~d   79 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAE-RGPVD   79 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH-cCCCC
Confidence            46899998 58999999988878898 5777878776654 33333211  111111 1222233333333222 24699


Q ss_pred             EEEEccCC
Q 018075          254 VSFDCVGF  261 (361)
Q Consensus       254 ~vld~~g~  261 (361)
                      +++.+.|.
T Consensus        80 ~vi~~ag~   87 (257)
T PRK07074         80 VLVANAGA   87 (257)
T ss_pred             EEEECCCC
Confidence            99999874

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=94.23  E-value=0.61  Score=43.48  Aligned_cols=35  Identities=23%  Similarity=0.460  Sum_probs=31.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  212 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~  212 (361)
                      .+.+|+|+|+|++|..+++.+...|...+..+|.+
T Consensus        40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            45789999999999999999999999888888765

>PRK08223 hypothetical protein; Validated

Probab=94.23  E-value=0.59  Score=41.65  Aligned_cols=35  Identities=31%  Similarity=0.525  Sum_probs=31.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  212 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~  212 (361)
                      ...+|||.|+|++|..+++.+.+.|...+..+|.+
T Consensus        26 ~~s~VlIvG~GGLGs~va~~LA~aGVG~i~lvD~D   60 (287)
T PRK08223         26 RNSRVAIAGLGGVGGIHLLTLARLGIGKFTIADFD   60 (287)
T ss_pred             hcCCEEEECCCHHHHHHHHHHHHhCCCeEEEEeCC
Confidence            46899999999999999999999999888888754

>COG4106 Tam Trans-aconitate methyltransferase [General function prediction only]

Probab=94.23  E-value=0.33  Score=40.87  Aligned_cols=99  Identities=22%  Similarity=0.224  Sum_probs=69.7

Q ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcC
Q 018075          170 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       170 ~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      .+.+..+.+-.+|.=+|||+ |...-.|++......+.+++++++-.+.+++...+.-..    ..+..    ..  ...
T Consensus        22 Lla~Vp~~~~~~v~DLGCGp-GnsTelL~~RwP~A~i~GiDsS~~Mla~Aa~rlp~~~f~----~aDl~----~w--~p~   90 (257)
T COG4106          22 LLARVPLERPRRVVDLGCGP-GNSTELLARRWPDAVITGIDSSPAMLAKAAQRLPDATFE----EADLR----TW--KPE   90 (257)
T ss_pred             HHhhCCccccceeeecCCCC-CHHHHHHHHhCCCCeEeeccCCHHHHHHHHHhCCCCcee----cccHh----hc--CCC
Confidence            33344556778888889998 999999999997668999999999988887766543221    12221    11  124


Q ss_pred             CCccEEEEccC------ChHHHHHHHHhhcCCCEEE
Q 018075          250 SGIDVSFDCVG------FDKTMSTALNATRPGGKVC  279 (361)
Q Consensus       250 ~~~d~vld~~g------~~~~~~~~~~~l~~~G~~v  279 (361)
                      ...|++|.+..      .+..+.+++..|+|||.+-
T Consensus        91 ~~~dllfaNAvlqWlpdH~~ll~rL~~~L~Pgg~LA  126 (257)
T COG4106          91 QPTDLLFANAVLQWLPDHPELLPRLVSQLAPGGVLA  126 (257)
T ss_pred             CccchhhhhhhhhhccccHHHHHHHHHhhCCCceEE
Confidence            56788876542      2358899999999999764

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=94.22  E-value=0.6  Score=40.83  Aligned_cols=81  Identities=20%  Similarity=0.231  Sum_probs=50.1

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChh--HHHHHHHcCCCE-E--eecCCCccchhHHHHHHHhhcCCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ--RLSIARNLGADE-T--AKVSTDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~--~~~~~~~lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~  251 (361)
                      +|.++||.| ++++|.+.++.+...|+ .|+.+.++..  ..+.+++.+.+. .  .+. .+.++..+.+.++.+. -++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~-~g~   83 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADL-IQQKDIDSIVSQAVEV-MGH   83 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCC-CCHHHHHHHHHHHHHH-cCC
Confidence            578899998 58999999998888999 5666655432  223334445322 1  222 2333444444444332 246


Q ss_pred             ccEEEEccCC
Q 018075          252 IDVSFDCVGF  261 (361)
Q Consensus       252 ~d~vld~~g~  261 (361)
                      +|+++++.|.
T Consensus        84 iD~lv~~ag~   93 (251)
T PRK12481         84 IDILINNAGI   93 (251)
T ss_pred             CCEEEECCCc
Confidence            9999998874

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=94.21  E-value=0.61  Score=39.29  Aligned_cols=35  Identities=14%  Similarity=0.178  Sum_probs=30.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  212 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~  212 (361)
                      ...+|+|.|+|++|...++.+-..|...+..+|.+
T Consensus        20 ~~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d   54 (197)
T cd01492          20 RSARILLIGLKGLGAEIAKNLVLSGIGSLTILDDR   54 (197)
T ss_pred             HhCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence            45789999999999999999999999888888754

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=94.21  E-value=0.48  Score=41.00  Aligned_cols=82  Identities=23%  Similarity=0.306  Sum_probs=50.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HHHcCCCE-EeecC-CCccchhHHHHHHHhhcCCCcc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      ++.++||.| +|.+|...+..+...|. .|+..+++.++.+. ...++... .+..+ .+..+..+.+.++.+. -.++|
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id   82 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEAD-LEGVD   82 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH-cCCCC
Confidence            467899998 59999999998888898 66666666655543 33344221 11111 1223333333333321 24799


Q ss_pred             EEEEccCC
Q 018075          254 VSFDCVGF  261 (361)
Q Consensus       254 ~vld~~g~  261 (361)
                      .++.+.|.
T Consensus        83 ~vi~~ag~   90 (245)
T PRK12936         83 ILVNNAGI   90 (245)
T ss_pred             EEEECCCC
Confidence            99999874

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.20  E-value=0.53  Score=41.61  Aligned_cols=81  Identities=14%  Similarity=0.177  Sum_probs=48.0

Q ss_pred             CCCEEEEECCC---HHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc----CCCEEeecC-CCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMGSG---PIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADETAKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G~g---~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      +|.++||.|++   ++|.+.++.+...|+ .|+.+++++...+.++++    +....+..+ .+..+....+.++.+. -
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~   82 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKV-W   82 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhh-c
Confidence            46789999853   899999988888999 566666653222333332    221122111 2333454555444332 2


Q ss_pred             CCccEEEEccC
Q 018075          250 SGIDVSFDCVG  260 (361)
Q Consensus       250 ~~~d~vld~~g  260 (361)
                      +++|+++++.|
T Consensus        83 g~iD~linnAg   93 (262)
T PRK07984         83 PKFDGFVHSIG   93 (262)
T ss_pred             CCCCEEEECCc
Confidence            46999999987

>PRK05479 ketol-acid reductoisomerase; Provisional

Probab=94.20  E-value=0.62  Score=42.47  Aligned_cols=87  Identities=16%  Similarity=0.098  Sum_probs=55.8

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  256 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  256 (361)
                      -++.+|.|+|.|.+|.+.++-++..|.+.++.........+.+++.|...        .+..+.        -...|+|+
T Consensus        15 L~gktIgIIG~GsmG~AlA~~L~~sG~~Vvv~~r~~~~s~~~A~~~G~~~--------~s~~ea--------a~~ADVVv   78 (330)
T PRK05479         15 IKGKKVAIIGYGSQGHAHALNLRDSGVDVVVGLREGSKSWKKAEADGFEV--------LTVAEA--------AKWADVIM   78 (330)
T ss_pred             hCCCEEEEEeeHHHHHHHHHHHHHCCCEEEEEECCchhhHHHHHHCCCee--------CCHHHH--------HhcCCEEE
Confidence            45789999999999999999999999954444444344556666667532        122222        14689999


Q ss_pred             EccCChHH---H-HHHHHhhcCCCEEE
Q 018075          257 DCVGFDKT---M-STALNATRPGGKVC  279 (361)
Q Consensus       257 d~~g~~~~---~-~~~~~~l~~~G~~v  279 (361)
                      -++.....   + +.+...++++..++
T Consensus        79 LaVPd~~~~~V~~~~I~~~Lk~g~iL~  105 (330)
T PRK05479         79 ILLPDEVQAEVYEEEIEPNLKEGAALA  105 (330)
T ss_pred             EcCCHHHHHHHHHHHHHhcCCCCCEEE
Confidence            99985522   1 22334556665553

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=94.20  E-value=0.56  Score=41.64  Aligned_cols=81  Identities=19%  Similarity=0.283  Sum_probs=49.1

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHc---CCC-EEeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNL---GAD-ETAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~l---g~~-~~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      ++.+++|.| +|++|.+.+..+...|+ .|+.++++.++.+ +.+++   +.. ..+..+ .+..+....+.++... -+
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~g   86 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILED-FG   86 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH-cC
Confidence            468899998 59999999998888999 5777777765443 23332   322 111111 1122333333333221 24


Q ss_pred             CccEEEEccC
Q 018075          251 GIDVSFDCVG  260 (361)
Q Consensus       251 ~~d~vld~~g  260 (361)
                      ++|+++.+.|
T Consensus        87 ~id~li~~ag   96 (278)
T PRK08277         87 PCDILINGAG   96 (278)
T ss_pred             CCCEEEECCC
Confidence            7999999887

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=94.19  E-value=0.58  Score=41.02  Aligned_cols=82  Identities=21%  Similarity=0.203  Sum_probs=49.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH---HHHHcCCC-EEeecC-CCccchhHHHHHHHhhcCCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS---IARNLGAD-ETAKVS-TDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~---~~~~lg~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~  251 (361)
                      .+.++||.| +|++|.+.++.+...|+ .++.+.++++..+   ...+.+.. ..+..+ .+..+....+.++... .++
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~g~   91 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEE-FGK   91 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-cCC
Confidence            578999998 59999999998888999 5666666532222   22333422 112211 2223333444444332 247


Q ss_pred             ccEEEEccCC
Q 018075          252 IDVSFDCVGF  261 (361)
Q Consensus       252 ~d~vld~~g~  261 (361)
                      +|+++.+.|.
T Consensus        92 id~li~~ag~  101 (258)
T PRK06935         92 IDILVNNAGT  101 (258)
T ss_pred             CCEEEECCCC
Confidence            9999998874

>PLN00203 glutamyl-tRNA reductase

Probab=94.16  E-value=0.64  Score=45.27  Aligned_cols=75  Identities=15%  Similarity=0.292  Sum_probs=51.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  256 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  256 (361)
                      .+.+|+|+|+|.+|.+++..+...|+..++++.++.++.+. +.+++...+. +    ..+.+. .+.    -.+.|+||
T Consensus       265 ~~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~-~----~~~~dl-~~a----l~~aDVVI  334 (519)
T PLN00203        265 ASARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEII-Y----KPLDEM-LAC----AAEADVVF  334 (519)
T ss_pred             CCCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceE-e----ecHhhH-HHH----HhcCCEEE
Confidence            37899999999999999999999998778888888877654 4455421111 1    011111 111    24799999


Q ss_pred             EccCCh
Q 018075          257 DCVGFD  262 (361)
Q Consensus       257 d~~g~~  262 (361)
                      .|++.+
T Consensus       335 sAT~s~  340 (519)
T PLN00203        335 TSTSSE  340 (519)
T ss_pred             EccCCC
Confidence            998655

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=94.14  E-value=0.66  Score=40.52  Aligned_cols=82  Identities=27%  Similarity=0.469  Sum_probs=50.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHc---CCC-EEeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNL---GAD-ETAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~l---g~~-~~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      .+.++||.| +|++|.+.++.+...|+ .++.++++.++.+ ..+++   +.. ..+..+ .+..+..+.+.++.+. -.
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~   85 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKD-IG   85 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHh-cC
Confidence            467899998 59999999998888899 6777777765543 22322   221 112221 1223333334333322 24


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|+++.+.|.
T Consensus        86 ~id~vi~~ag~   96 (254)
T PRK08085         86 PIDVLINNAGI   96 (254)
T ss_pred             CCCEEEECCCc
Confidence            69999998874

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=94.08  E-value=0.5  Score=41.42  Aligned_cols=82  Identities=23%  Similarity=0.354  Sum_probs=51.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcCCCE-EeecC-CCccchhHHHHHHHhhcCCCcc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      .+.++||.| +|.+|...++.+...|+ .|+.++++.++.+.+ ++++... .+..+ .+..+....+.++.+. -.++|
T Consensus         5 ~~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id   82 (257)
T PRK07067          5 QGKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVER-FGGID   82 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH-cCCCC
Confidence            467899998 59999999998888999 677887877765433 3344221 11111 2223334444433322 24799


Q ss_pred             EEEEccCC
Q 018075          254 VSFDCVGF  261 (361)
Q Consensus       254 ~vld~~g~  261 (361)
                      +++.+.|.
T Consensus        83 ~li~~ag~   90 (257)
T PRK07067         83 ILFNNAAL   90 (257)
T ss_pred             EEEECCCc
Confidence            99998763

>PRK08263 short chain dehydrogenase; Provisional

Probab=94.07  E-value=0.5  Score=41.95  Aligned_cols=81  Identities=23%  Similarity=0.220  Sum_probs=49.4

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH-cCCC-EEeecC-CCccchhHHHHHHHhhcCCCccE
Q 018075          179 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGAD-ETAKVS-TDIEDVDTDVGKIQNAMGSGIDV  254 (361)
Q Consensus       179 g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~  254 (361)
                      +.++||.| +|.+|...++.+...|. .|+.++++.++.+.+.+ ++.. ..+..+ .+..+....+.++... -.++|.
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~~d~   80 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEH-FGRLDI   80 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHH-cCCCCE
Confidence            45789998 69999999998877898 57788787766554433 3321 111111 1222333333333221 247899


Q ss_pred             EEEccCC
Q 018075          255 SFDCVGF  261 (361)
Q Consensus       255 vld~~g~  261 (361)
                      ++.+.|.
T Consensus        81 vi~~ag~   87 (275)
T PRK08263         81 VVNNAGY   87 (275)
T ss_pred             EEECCCC
Confidence            9999874

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=94.07  E-value=1  Score=35.54  Aligned_cols=85  Identities=19%  Similarity=0.195  Sum_probs=58.9

Q ss_pred             HHHHhcCC-CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHh
Q 018075          169 HACRRANV-GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN  246 (361)
Q Consensus       169 ~~l~~~~~-~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~  246 (361)
                      ..++..++ -+|.+++|+| +..+|.-++.++...|+ .|..+.+...                     +..+.+     
T Consensus        17 ~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~ga-tV~~~~~~t~---------------------~l~~~v-----   69 (140)
T cd05212          17 ELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGA-TVYSCDWKTI---------------------QLQSKV-----   69 (140)
T ss_pred             HHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeCCCCc---------------------CHHHHH-----
Confidence            34455444 4799999999 78999999999999999 5666654321                     111111     


Q ss_pred             hcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCC
Q 018075          247 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       247 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~  285 (361)
                         +..|+|+.++|.+..+.  -+.+++|..++.+|...
T Consensus        70 ---~~ADIVvsAtg~~~~i~--~~~ikpGa~Vidvg~~~  103 (140)
T cd05212          70 ---HDADVVVVGSPKPEKVP--TEWIKPGATVINCSPTK  103 (140)
T ss_pred             ---hhCCEEEEecCCCCccC--HHHcCCCCEEEEcCCCc
Confidence               46899999988774333  45689999888877554

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=94.06  E-value=0.66  Score=40.31  Aligned_cols=81  Identities=23%  Similarity=0.333  Sum_probs=49.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH----HHcCCCE-EeecCC-CccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADE-TAKVST-DIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~~~~~~-~~~~~~~~~~~~~~~~~~  250 (361)
                      ++.++||.| +|.+|...+..+...|+ .|+.++++.++.+.+    ++.+... .+..+- +..+..+.+..+.+. -.
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-~~   79 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQA-LG   79 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence            468899998 59999999998888899 577777776654332    2223221 222211 222333333333321 24


Q ss_pred             CccEEEEccC
Q 018075          251 GIDVSFDCVG  260 (361)
Q Consensus       251 ~~d~vld~~g  260 (361)
                      ++|++|.+.|
T Consensus        80 ~~d~vi~~ag   89 (250)
T TIGR03206        80 PVDVLVNNAG   89 (250)
T ss_pred             CCCEEEECCC
Confidence            7899999987

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK09242 tropinone reductase; Provisional

Probab=94.05  E-value=0.7  Score=40.46  Aligned_cols=81  Identities=25%  Similarity=0.312  Sum_probs=50.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHc-----CCCE-E--eecCCCccchhHHHHHHHhh
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL-----GADE-T--AKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l-----g~~~-~--~~~~~~~~~~~~~~~~~~~~  247 (361)
                      .+.++||.| +|++|...+..+...|+ .|+.++++.++.+.+ +++     +.+. .  .++ .+..+....+.++...
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl-~~~~~~~~~~~~~~~~   85 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADV-SDDEDRRAILDWVEDH   85 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCC-CCHHHHHHHHHHHHHH
Confidence            478999998 59999999999888999 577777777654432 222     2111 1  122 1223333344443332


Q ss_pred             cCCCccEEEEccCC
Q 018075          248 MGSGIDVSFDCVGF  261 (361)
Q Consensus       248 ~~~~~d~vld~~g~  261 (361)
                       -.++|+++.+.|.
T Consensus        86 -~g~id~li~~ag~   98 (257)
T PRK09242         86 -WDGLHILVNNAGG   98 (257)
T ss_pred             -cCCCCEEEECCCC
Confidence             2479999999985

>PRK07411 hypothetical protein; Validated

Probab=94.01  E-value=0.6  Score=43.89  Aligned_cols=35  Identities=37%  Similarity=0.494  Sum_probs=31.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  212 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~  212 (361)
                      ...+|||+|+|++|..+++.+...|...+..+|.+
T Consensus        37 ~~~~VlivG~GGlG~~va~~La~~Gvg~l~lvD~D   71 (390)
T PRK07411         37 KAASVLCIGTGGLGSPLLLYLAAAGIGRIGIVDFD   71 (390)
T ss_pred             hcCcEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            35799999999999999999999999888888754

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=94.01  E-value=0.46  Score=41.44  Aligned_cols=78  Identities=21%  Similarity=0.293  Sum_probs=49.1

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH-cCCCE-Ee--ecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          181 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADE-TA--KVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       181 ~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      +++|.| +|++|.+.+..+...|+ .|+.+++++++.+.+.. ++... .+  +. .+..+..+.+.++.+. .+++|++
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl-~~~~~i~~~~~~~~~~-~~~id~v   78 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDV-RNRAAIEEMLASLPAE-WRNIDVL   78 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecC-CCHHHHHHHHHHHHHH-cCCCCEE
Confidence            688998 59999999998888999 57888888776654433 44321 11  22 2222333333333321 2479999


Q ss_pred             EEccCC
Q 018075          256 FDCVGF  261 (361)
Q Consensus       256 ld~~g~  261 (361)
                      +.+.|.
T Consensus        79 i~~ag~   84 (248)
T PRK10538         79 VNNAGL   84 (248)
T ss_pred             EECCCc
Confidence            998764

>CHL00194 ycf39 Ycf39; Provisional

Probab=94.01  E-value=0.36  Score=43.94  Aligned_cols=94  Identities=12%  Similarity=0.194  Sum_probs=56.6

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEcc
Q 018075          181 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV  259 (361)
Q Consensus       181 ~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  259 (361)
                      +|||.| +|-+|...+..+...|. .|.+++++.++...+...+...+. .+  -.+.. .+.+.    -.++|+||+++
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~-~D--l~d~~-~l~~a----l~g~d~Vi~~~   72 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVY-GD--LSLPE-TLPPS----FKGVTAIIDAS   72 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEE-CC--CCCHH-HHHHH----HCCCCEEEECC
Confidence            689998 59999999998888898 577777776665554445554322 11  11221 12222    14689999986


Q ss_pred             CChH------------HHHHHHHhhcCCC--EEEEEcc
Q 018075          260 GFDK------------TMSTALNATRPGG--KVCLIGL  283 (361)
Q Consensus       260 g~~~------------~~~~~~~~l~~~G--~~v~~g~  283 (361)
                      +...            ....+++.+...|  +++.++.
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss  110 (317)
T CHL00194         73 TSRPSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSI  110 (317)
T ss_pred             CCCCCCccchhhhhHHHHHHHHHHHHHcCCCEEEEecc
Confidence            5321            1123444444333  7887765

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=93.99  E-value=0.69  Score=39.93  Aligned_cols=81  Identities=22%  Similarity=0.285  Sum_probs=50.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH----HHcCCCEE---eecCCCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADET---AKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      ++.++||.| +|.+|...++.+...|.+ |+.+.+++++.+..    ++.+....   .+. .+..++.+.+.++... -
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~-~   80 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAADGAK-VVIYDSNEEAAEALAAELRAAGGEARVLVFDV-SDEAAVRALIEAAVEA-F   80 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHHHHhcCCceEEEEccC-CCHHHHHHHHHHHHHH-h
Confidence            457899998 599999999988888994 78888877654332    22333221   122 1223344444443321 2


Q ss_pred             CCccEEEEccCC
Q 018075          250 SGIDVSFDCVGF  261 (361)
Q Consensus       250 ~~~d~vld~~g~  261 (361)
                      .++|.++.+.|.
T Consensus        81 ~~id~vi~~ag~   92 (246)
T PRK05653         81 GALDILVNNAGI   92 (246)
T ss_pred             CCCCEEEECCCc
Confidence            468999998864

>PRK06914 short chain dehydrogenase; Provisional

Probab=93.98  E-value=0.49  Score=42.03  Aligned_cols=80  Identities=19%  Similarity=0.269  Sum_probs=47.9

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCC--C-EEeecC-CCccchhHHHHHHHhhcC
Q 018075          179 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGA--D-ETAKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       179 g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~--~-~~~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      +.++||.| +|.+|...+..+...|+ .|++++++.++.+.+.+    .+.  . ..+..+ .+.++... +.++... -
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~-~   79 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKE-I   79 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHh-c
Confidence            56789998 59999999998888899 57777777665443322    221  1 111111 12223333 3333321 2


Q ss_pred             CCccEEEEccCC
Q 018075          250 SGIDVSFDCVGF  261 (361)
Q Consensus       250 ~~~d~vld~~g~  261 (361)
                      +++|+++.+.|.
T Consensus        80 ~~id~vv~~ag~   91 (280)
T PRK06914         80 GRIDLLVNNAGY   91 (280)
T ss_pred             CCeeEEEECCcc
Confidence            478999998864

>KOG1661 consensus Protein-L-isoaspartate(D-aspartate) O-methyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=93.98  E-value=0.15  Score=42.59  Aligned_cols=111  Identities=16%  Similarity=0.196  Sum_probs=69.4

Q ss_pred             hHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEE--EEEeCChhHHHHHHHcCCCEEeecCCCccchhHHH
Q 018075          164 LSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRI--IITDVDVQRLSIARNLGADETAKVSTDIEDVDTDV  241 (361)
Q Consensus       164 ~~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~v--v~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~  241 (361)
                      .++++..|.. .++||.+.|=+|+|. |++...++++.|..-.  ++++.-++-.+..++ +.+..+..++   . ...+
T Consensus        69 ha~~le~L~~-~L~pG~s~LdvGsGS-GYLt~~~~~mvg~~g~~~~GIEh~~eLVe~Sk~-nl~k~i~~~e---~-~~~~  141 (237)
T KOG1661|consen   69 HATALEYLDD-HLQPGASFLDVGSGS-GYLTACFARMVGATGGNVHGIEHIPELVEYSKK-NLDKDITTSE---S-SSKL  141 (237)
T ss_pred             HHHHHHHHHH-hhccCcceeecCCCc-cHHHHHHHHHhcCCCccccchhhhHHHHHHHHH-HHHhhccCch---h-hhhh
Confidence            4455555543 379999999998866 8999999988887544  666665554444433 1111010000   0 0000


Q ss_pred             HH-----------HHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEE
Q 018075          242 GK-----------IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       242 ~~-----------~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~  281 (361)
                      +.           .-.....++|.+.--.+.+...+.+++.|.++|+++..
T Consensus       142 ~~~~l~ivvGDgr~g~~e~a~YDaIhvGAaa~~~pq~l~dqL~~gGrllip  192 (237)
T KOG1661|consen  142 KRGELSIVVGDGRKGYAEQAPYDAIHVGAAASELPQELLDQLKPGGRLLIP  192 (237)
T ss_pred             ccCceEEEeCCccccCCccCCcceEEEccCccccHHHHHHhhccCCeEEEe
Confidence            00           00112457999998888788999999999999999875

>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=93.97  E-value=0.26  Score=49.82  Aligned_cols=78  Identities=22%  Similarity=0.325  Sum_probs=50.4

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChh---------------------HHHHHHHcCCCEEeecCCCcc
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ---------------------RLSIARNLGADETAKVSTDIE  235 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~---------------------~~~~~~~lg~~~~~~~~~~~~  235 (361)
                      ..+.+|+|+|+|+.|++++..++..|. .|++++..+.                     ..+.++++|.+...+..-. .
T Consensus       325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~-~  402 (654)
T PRK12769        325 KSDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVG-K  402 (654)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeC-C
Confidence            358899999999999999999999999 4777765432                     3455667776543221000 1


Q ss_pred             chhHHHHHHHhhcCCCccEEEEccCCh
Q 018075          236 DVDTDVGKIQNAMGSGIDVSFDCVGFD  262 (361)
Q Consensus       236 ~~~~~~~~~~~~~~~~~d~vld~~g~~  262 (361)
                      +.  .+.++    ..++|.||.++|..
T Consensus       403 ~i--~~~~~----~~~~DavilAtGa~  423 (654)
T PRK12769        403 DI--SLESL----LEDYDAVFVGVGTY  423 (654)
T ss_pred             cC--CHHHH----HhcCCEEEEeCCCC
Confidence            11  11122    13699999988853

>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]

Probab=93.97  E-value=0.98  Score=41.09  Aligned_cols=90  Identities=18%  Similarity=0.139  Sum_probs=64.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  256 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  256 (361)
                      ..|++|.|+|.|.+|+..++-++..| +.+....+...+.+.+.+.++..        .++.+.+        ...|+++
T Consensus       160 ~~gK~vgilG~G~IG~~ia~rL~~Fg-~~i~y~~r~~~~~~~~~~~~~~~--------~d~~~~~--------~~sD~iv  222 (336)
T KOG0069|consen  160 LEGKTVGILGLGRIGKAIAKRLKPFG-CVILYHSRTQLPPEEAYEYYAEF--------VDIEELL--------ANSDVIV  222 (336)
T ss_pred             ccCCEEEEecCcHHHHHHHHhhhhcc-ceeeeecccCCchhhHHHhcccc--------cCHHHHH--------hhCCEEE
Confidence            46899999999999999999999999 57888878777777777777652        2333332        3466665


Q ss_pred             E-ccCChHHHHH-----HHHhhcCCCEEEEEccC
Q 018075          257 D-CVGFDKTMST-----ALNATRPGGKVCLIGLA  284 (361)
Q Consensus       257 d-~~g~~~~~~~-----~~~~l~~~G~~v~~g~~  284 (361)
                      - |..++ ....     .+..|++++.+|-++..
T Consensus       223 v~~pLt~-~T~~liNk~~~~~mk~g~vlVN~aRG  255 (336)
T KOG0069|consen  223 VNCPLTK-ETRHLINKKFIEKMKDGAVLVNTARG  255 (336)
T ss_pred             EecCCCH-HHHHHhhHHHHHhcCCCeEEEecccc
Confidence            4 54444 4444     55688999988766543

>PRK12367 short chain dehydrogenase; Provisional

Probab=93.97  E-value=0.53  Score=41.15  Aligned_cols=75  Identities=23%  Similarity=0.192  Sum_probs=44.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCh-hHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDV-QRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~-~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++ +..+... .+....+..+-  .+..+ +.+.    -.++|++
T Consensus        13 ~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~-~~~~~~~~~D~--~~~~~-~~~~----~~~iDil   83 (245)
T PRK12367         13 QGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESND-ESPNEWIKWEC--GKEES-LDKQ----LASLDVL   83 (245)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhc-cCCCeEEEeeC--CCHHH-HHHh----cCCCCEE
Confidence            367899998 58999999998888999 577776665 2222211 11112222111  12221 2221    2469999


Q ss_pred             EEccCC
Q 018075          256 FDCVGF  261 (361)
Q Consensus       256 ld~~g~  261 (361)
                      +++.|.
T Consensus        84 VnnAG~   89 (245)
T PRK12367         84 ILNHGI   89 (245)
T ss_pred             EECCcc
Confidence            999875

>PRK13303 L-aspartate dehydrogenase; Provisional

Probab=93.96  E-value=0.75  Score=40.75  Aligned_cols=89  Identities=19%  Similarity=0.245  Sum_probs=54.6

Q ss_pred             EEEEECCCHHHHHHHHHHHHc-CCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEcc
Q 018075          181 NVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV  259 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  259 (361)
                      +|.|+|+|.+|...++..... +.+.+.++..........+.++.. +..+    .++.    ++    ...+|+|++|.
T Consensus         3 rVgIiG~G~iG~~~~~~l~~~~~~~l~~v~~~~~~~~~~~~~~~~~-~~~~----~d~~----~l----~~~~DvVve~t   69 (265)
T PRK13303          3 KVAMIGFGAIGAAVLELLEHDPDLRVDWVIVPEHSIDAVRRALGEA-VRVV----SSVD----AL----PQRPDLVVECA   69 (265)
T ss_pred             EEEEECCCHHHHHHHHHHhhCCCceEEEEEEcCCCHHHHhhhhccC-Ceee----CCHH----Hh----ccCCCEEEECC
Confidence            688999999999888866655 454333333322222222223221 1111    1221    12    24699999999


Q ss_pred             CChHHHHHHHHhhcCCCEEEEEc
Q 018075          260 GFDKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       260 g~~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      +...+.+.....|..|-.++...
T Consensus        70 ~~~~~~e~~~~aL~aGk~Vvi~s   92 (265)
T PRK13303         70 GHAALKEHVVPILKAGIDCAVIS   92 (265)
T ss_pred             CHHHHHHHHHHHHHcCCCEEEeC
Confidence            98878888889998887777643

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=93.96  E-value=0.47  Score=41.20  Aligned_cols=95  Identities=24%  Similarity=0.343  Sum_probs=63.6

Q ss_pred             CHHHHHHHHHHHHcCCCEEEEEeCChhH-----HHHHHHcCCCEEeecCC-CccchhHHHHHHHhhcCCCccEEEEccCC
Q 018075          188 GPIGLVTLLAARAFGAPRIIITDVDVQR-----LSIARNLGADETAKVST-DIEDVDTDVGKIQNAMGSGIDVSFDCVGF  261 (361)
Q Consensus       188 g~~G~~ai~la~~~g~~~vv~v~~~~~~-----~~~~~~lg~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~vld~~g~  261 (361)
                      +++|.+.++-+...|+ .|+.++++.++     .++.++.+.. ++..+- +.++....+.++.+..++++|+++++.+.
T Consensus         6 ~GiG~aia~~l~~~Ga-~V~~~~~~~~~~~~~~~~l~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~a~~   83 (241)
T PF13561_consen    6 SGIGRAIARALAEEGA-NVILTDRNEEKLADALEELAKEYGAE-VIQCDLSDEESVEALFDEAVERFGGRIDILVNNAGI   83 (241)
T ss_dssp             SHHHHHHHHHHHHTTE-EEEEEESSHHHHHHHHHHHHHHTTSE-EEESCTTSHHHHHHHHHHHHHHHCSSESEEEEEEES
T ss_pred             CChHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHHHcCCc-eEeecCcchHHHHHHHHHHHhhcCCCeEEEEecccc
Confidence            7999999999999999 68888888876     2445556654 444332 33445555555554444789999986543


Q ss_pred             h-----------------------------HHHHHHHHhhcCCCEEEEEccC
Q 018075          262 D-----------------------------KTMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       262 ~-----------------------------~~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      .                             ...+.+.+.++++|.++.++..
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~  135 (241)
T PF13561_consen   84 SPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSI  135 (241)
T ss_dssp             CTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEG
T ss_pred             cccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccch
Confidence            2                             1344455677888999988643

...

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=93.95  E-value=1.3  Score=34.41  Aligned_cols=94  Identities=16%  Similarity=0.230  Sum_probs=56.6

Q ss_pred             EEEEC-CCHHHHHHHHHHHHcC--CCEEEEEeCChh---HHHHHHHcCCCEEeecCCCccchhHHHHHHH----------
Q 018075          182 VMIMG-SGPIGLVTLLAARAFG--APRIIITDVDVQ---RLSIARNLGADETAKVSTDIEDVDTDVGKIQ----------  245 (361)
Q Consensus       182 vlI~G-~g~~G~~ai~la~~~g--~~~vv~v~~~~~---~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~----------  245 (361)
                      |.|+| +|++|..+..+++...  + .|++......   =.+.+++|.+..+...+.   ...+.+++..          
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~---~~~~~l~~~~~~~~~~~~v~   76 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADE---EAYEELKKALPSKGPGIEVL   76 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSH---HHHHHHHHHHHHTTSSSEEE
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH---HHHHHHHHHhhhcCCCCEEE
Confidence            57889 5999999999999987  6 4666644332   235667788888766432   1112222111          


Q ss_pred             -------hhc-CCCccEEEEccCChHHHHHHHHhhcCCCEEE
Q 018075          246 -------NAM-GSGIDVSFDCVGFDKTMSTALNATRPGGKVC  279 (361)
Q Consensus       246 -------~~~-~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v  279 (361)
                             +.. ..++|+|+.++.+-..+.-.+..+..|=++.
T Consensus        77 ~G~~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~ia  118 (129)
T PF02670_consen   77 SGPEGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIA  118 (129)
T ss_dssp             ESHHHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEE
T ss_pred             eChHHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEE
Confidence                   111 2568888887766667777777777665554

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=93.93  E-value=0.29  Score=43.77  Aligned_cols=43  Identities=21%  Similarity=0.370  Sum_probs=36.5

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA  219 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~  219 (361)
                      .++.++||+|+|+.+.+++.-+...|+..+..++++.+|.+.+
T Consensus       125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~L  167 (283)
T PRK14027        125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQAL  167 (283)
T ss_pred             cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHH
Confidence            4578999999999999999988889998888898888776544

>PRK07063 short chain dehydrogenase; Provisional

Probab=93.91  E-value=0.49  Score=41.55  Aligned_cols=82  Identities=23%  Similarity=0.276  Sum_probs=50.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HHHc-----CCC-EEeecC-CCccchhHHHHHHHhhc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNL-----GAD-ETAKVS-TDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~l-----g~~-~~~~~~-~~~~~~~~~~~~~~~~~  248 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+. .+++     +.. ..+..+ .+..+....+.++.+. 
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-   83 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA-   83 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH-
Confidence            467899998 59999999998888999 57777777665443 2332     211 111111 2223344444444332 


Q ss_pred             CCCccEEEEccCC
Q 018075          249 GSGIDVSFDCVGF  261 (361)
Q Consensus       249 ~~~~d~vld~~g~  261 (361)
                      -+++|+++++.|.
T Consensus        84 ~g~id~li~~ag~   96 (260)
T PRK07063         84 FGPLDVLVNNAGI   96 (260)
T ss_pred             hCCCcEEEECCCc
Confidence            2479999998874

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=93.89  E-value=1.5  Score=38.19  Aligned_cols=77  Identities=21%  Similarity=0.236  Sum_probs=46.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCC-EEeecC-CCccchhHHHHHHHhhcCCCccE
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD-ETAKVS-TDIEDVDTDVGKIQNAMGSGIDV  254 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~  254 (361)
                      ++.++||.| +|.+|...+..+...|+ .|+.++++.     ....+.. ..+..+ .+..++.+.+.++... ..++|+
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~id~   79 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSDAAAVAQVCQRLLAE-TGPLDV   79 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCCHHHHHHHHHHHHHH-cCCCCE
Confidence            467899998 58999999998888899 577776654     1222221 111111 2223333444333321 246999


Q ss_pred             EEEccCC
Q 018075          255 SFDCVGF  261 (361)
Q Consensus       255 vld~~g~  261 (361)
                      +|.+.|.
T Consensus        80 vi~~ag~   86 (252)
T PRK08220         80 LVNAAGI   86 (252)
T ss_pred             EEECCCc
Confidence            9998874

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=93.89  E-value=0.51  Score=41.11  Aligned_cols=80  Identities=20%  Similarity=0.334  Sum_probs=49.0

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCE-EeecC-CCccchhHHHHHHHhhcCCCc
Q 018075          180 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       180 ~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      .++||.| +|.+|...+..+...|. .|+.++++.++.+.+.+    .+... .+..+ .+.+++...+.++... ..++
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~~~   79 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAE-FGGL   79 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh-cCCC
Confidence            5789998 59999999998888899 68888887765544332    22221 11111 2223343444444332 2468


Q ss_pred             cEEEEccCC
Q 018075          253 DVSFDCVGF  261 (361)
Q Consensus       253 d~vld~~g~  261 (361)
                      |++|.+.+.
T Consensus        80 d~vi~~a~~   88 (255)
T TIGR01963        80 DILVNNAGI   88 (255)
T ss_pred             CEEEECCCC
Confidence            999987764

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=93.88  E-value=0.69  Score=40.50  Aligned_cols=81  Identities=12%  Similarity=0.189  Sum_probs=48.3

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HH----cCCCEE--eecC-CCccchhHHHHHHHhhcC
Q 018075          179 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN----LGADET--AKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       179 g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~----lg~~~~--~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      +.++||.| +|.+|.+.+..+...|+ .++.++++.++.+.+ ++    .+...+  +..+ ++..+....+.++... -
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~   79 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEI-F   79 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHH-c
Confidence            46899998 58999999998888898 677787776544322 22    221111  2111 1222333333333322 2


Q ss_pred             CCccEEEEccCC
Q 018075          250 SGIDVSFDCVGF  261 (361)
Q Consensus       250 ~~~d~vld~~g~  261 (361)
                      .++|+++++.|.
T Consensus        80 ~~id~vv~~ag~   91 (259)
T PRK12384         80 GRVDLLVYNAGI   91 (259)
T ss_pred             CCCCEEEECCCc
Confidence            479999998874

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=93.88  E-value=0.66  Score=41.44  Aligned_cols=87  Identities=20%  Similarity=0.161  Sum_probs=56.3

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccC
Q 018075          181 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG  260 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  260 (361)
                      +|.|+|.|.+|...+..++..|. .|.+.++++++.+.+.+.|.....   .  .+. +.        -...|+||-|+.
T Consensus         2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~~~~~---~--~~~-~~--------~~~aDlVilavp   66 (279)
T PRK07417          2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGLVDEA---S--TDL-SL--------LKDCDLVILALP   66 (279)
T ss_pred             eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCcccc---c--CCH-hH--------hcCCCEEEEcCC
Confidence            58899999999988888887887 688999999888888877742110   1  111 11        146889998888


Q ss_pred             ChHH---HHHHHHhhcCCCEEEEEc
Q 018075          261 FDKT---MSTALNATRPGGKVCLIG  282 (361)
Q Consensus       261 ~~~~---~~~~~~~l~~~G~~v~~g  282 (361)
                      ....   ++.+...++++..+..++
T Consensus        67 ~~~~~~~~~~l~~~l~~~~ii~d~~   91 (279)
T PRK07417         67 IGLLLPPSEQLIPALPPEAIVTDVG   91 (279)
T ss_pred             HHHHHHHHHHHHHhCCCCcEEEeCc
Confidence            5522   233334445554444443

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=93.85  E-value=0.85  Score=40.74  Aligned_cols=86  Identities=27%  Similarity=0.382  Sum_probs=53.2

Q ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcCCCEEee----cCCCccc---hhHHHHHHH
Q 018075          175 NVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADETAK----VSTDIED---VDTDVGKIQ  245 (361)
Q Consensus       175 ~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~----~~~~~~~---~~~~~~~~~  245 (361)
                      +.++...++|.| +.++|.+.+..++..|+++ -.+.++.+++..+ ++++....+.    ++.+..+   .+..+++++
T Consensus        29 ~~k~~~hi~itggS~glgl~la~e~~~~ga~V-ti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~  107 (331)
T KOG1210|consen   29 KPKPRRHILITGGSSGLGLALALECKREGADV-TITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELR  107 (331)
T ss_pred             ccCccceEEEecCcchhhHHHHHHHHHccCce-EEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhh
Confidence            345568899997 7899999999999999964 4444666665544 4455322111    1111122   233333332


Q ss_pred             hhcCCCccEEEEccCCh
Q 018075          246 NAMGSGIDVSFDCVGFD  262 (361)
Q Consensus       246 ~~~~~~~d~vld~~g~~  262 (361)
                      . ....+|.+|.|.|..
T Consensus       108 ~-~~~~~d~l~~cAG~~  123 (331)
T KOG1210|consen  108 D-LEGPIDNLFCCAGVA  123 (331)
T ss_pred             h-ccCCcceEEEecCcc
Confidence            2 235799999999865

>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]

Probab=93.83  E-value=0.97  Score=41.20  Aligned_cols=99  Identities=16%  Similarity=0.160  Sum_probs=68.5

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH------cCC-----CEEeecCCCccchhHHHHHH
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN------LGA-----DETAKVSTDIEDVDTDVGKI  244 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~------lg~-----~~~~~~~~~~~~~~~~~~~~  244 (361)
                      ++.-++|||+|.|. |+++-++.|.=+...|.-++-+++-.+++++      ++.     ..+...+   +|.-++++. 
T Consensus       287 ~~~a~~vLvlGGGD-GLAlRellkyP~~~qI~lVdLDP~miela~~~~vlr~~N~~sf~dpRv~Vv~---dDAf~wlr~-  361 (508)
T COG4262         287 VRGARSVLVLGGGD-GLALRELLKYPQVEQITLVDLDPRMIELASHATVLRALNQGSFSDPRVTVVN---DDAFQWLRT-  361 (508)
T ss_pred             ccccceEEEEcCCc-hHHHHHHHhCCCcceEEEEecCHHHHHHhhhhhHhhhhccCCccCCeeEEEe---ccHHHHHHh-
Confidence            45668999999887 9999999999888899999999987777662      221     1222222   233344433 


Q ss_pred             HhhcCCCccEEEEccCCh-----------HHHHHHHHhhcCCCEEEEEc
Q 018075          245 QNAMGSGIDVSFDCVGFD-----------KTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       245 ~~~~~~~~d~vld~~g~~-----------~~~~~~~~~l~~~G~~v~~g  282 (361)
                         .+.++|.||--...|           +....+-+.|++.|.+|.-.
T Consensus       362 ---a~~~fD~vIVDl~DP~tps~~rlYS~eFY~ll~~~l~e~Gl~VvQa  407 (508)
T COG4262         362 ---AADMFDVVIVDLPDPSTPSIGRLYSVEFYRLLSRHLAETGLMVVQA  407 (508)
T ss_pred             ---hcccccEEEEeCCCCCCcchhhhhhHHHHHHHHHhcCcCceEEEec
Confidence               356899997644433           24455678899999988654

>PRK06197 short chain dehydrogenase; Provisional

Probab=93.83  E-value=0.67  Score=41.92  Aligned_cols=82  Identities=21%  Similarity=0.321  Sum_probs=48.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HHHc-----CCC-EEeecC-CCccchhHHHHHHHhhc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNL-----GAD-ETAKVS-TDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~l-----g~~-~~~~~~-~~~~~~~~~~~~~~~~~  248 (361)
                      .+.++||.| +|++|.++++.+...|+ .|+.+.++.++.+. .+++     +.. ..+..+ .+.++..+.+.++... 
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~-   92 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAA-   92 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhh-
Confidence            578999998 59999999998888899 57777777665432 2222     111 111111 1222333333333321 


Q ss_pred             CCCccEEEEccCC
Q 018075          249 GSGIDVSFDCVGF  261 (361)
Q Consensus       249 ~~~~d~vld~~g~  261 (361)
                      -.++|+++.+.|.
T Consensus        93 ~~~iD~li~nAg~  105 (306)
T PRK06197         93 YPRIDLLINNAGV  105 (306)
T ss_pred             CCCCCEEEECCcc
Confidence            2479999998873

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.78  E-value=1.9  Score=37.39  Aligned_cols=107  Identities=14%  Similarity=0.194  Sum_probs=60.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHH----HHHHHcCCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRL----SIARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~----~~~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      .+.++||.| +|.+|...++-+...|++.++....+.+..    ..+++.+... .+..+ .+..+....+.++... -.
T Consensus         5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   83 (252)
T PRK06077          5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDR-YG   83 (252)
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHH-cC
Confidence            367899998 589999999988889995434343333222    2223333321 11111 1222333333333322 24


Q ss_pred             CccEEEEccCCh----------H---------------HHHHHHHhhcCCCEEEEEccCC
Q 018075          251 GIDVSFDCVGFD----------K---------------TMSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       251 ~~d~vld~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~~  285 (361)
                      ++|.+|.+.|..          +               ..+.+.+.+...|+++.++...
T Consensus        84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~  143 (252)
T PRK06077         84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVA  143 (252)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchh
Confidence            799999998731          1               1334455667778999887543

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=93.77  E-value=0.59  Score=40.40  Aligned_cols=82  Identities=22%  Similarity=0.328  Sum_probs=49.1

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HHH---cCCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARN---LGADE-TAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~---lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      .+.++||.| +|.+|...+..+...|+ .|+.+++++++.+. .++   .+... .+..+ .+..+..+.++.+.. .-+
T Consensus         6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~   83 (239)
T PRK07666          6 QGKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKN-ELG   83 (239)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHH-HcC
Confidence            357899998 58999999998888899 67778787665432 222   23211 11111 122233333333322 124


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|++|.+.|.
T Consensus        84 ~id~vi~~ag~   94 (239)
T PRK07666         84 SIDILINNAGI   94 (239)
T ss_pred             CccEEEEcCcc
Confidence            79999998864

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=93.77  E-value=1.9  Score=38.98  Aligned_cols=43  Identities=14%  Similarity=0.158  Sum_probs=35.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCC
Q 018075          181 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA  224 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~  224 (361)
                      +|.|+|.|.+|...+.-+...|. .|++.++++++.+.+.+.+.
T Consensus         2 ~Ig~IGlG~mG~~la~~L~~~g~-~V~~~dr~~~~~~~l~~~g~   44 (298)
T TIGR00872         2 QLGLIGLGRMGANIVRRLAKRGH-DCVGYDHDQDAVKAMKEDRT   44 (298)
T ss_pred             EEEEEcchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCC
Confidence            57889999999988887777888 57778999988887776653

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=93.76  E-value=1.9  Score=37.15  Aligned_cols=83  Identities=20%  Similarity=0.267  Sum_probs=45.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHH-HHHH---HcCCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRL-SIAR---NLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~-~~~~---~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      .+.++||.| +|.+|...+..+...|++.++...+.+++. +...   ..+... .+..+ .+..++.+...++... -.
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~   82 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAE-FG   82 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence            456899998 599999999988888995434444333222 2222   223221 11111 1122233333333221 24


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|.++.+.|.
T Consensus        83 ~id~vi~~ag~   93 (248)
T PRK05557         83 GVDILVNNAGI   93 (248)
T ss_pred             CCCEEEECCCc
Confidence            68999998874

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=93.76  E-value=0.76  Score=43.26  Aligned_cols=35  Identities=31%  Similarity=0.501  Sum_probs=30.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  212 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~  212 (361)
                      ...+|||+|+|++|..++..+...|...+..+|.+
T Consensus        41 ~~~~VlviG~GGlGs~va~~La~~Gvg~i~lvD~D   75 (392)
T PRK07878         41 KNARVLVIGAGGLGSPTLLYLAAAGVGTLGIVEFD   75 (392)
T ss_pred             hcCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCC
Confidence            45789999999999999999999999888888744

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=93.75  E-value=1.1  Score=34.64  Aligned_cols=93  Identities=18%  Similarity=0.170  Sum_probs=52.6

Q ss_pred             EEEEECC-CHHHHHHHHHHHH-cCCCEEEEEeCChh---HHHHHHHcCCC--EEeecCCCccchhHHHHHHHhhcCCCcc
Q 018075          181 NVMIMGS-GPIGLVTLLAARA-FGAPRIIITDVDVQ---RLSIARNLGAD--ETAKVSTDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       181 ~vlI~G~-g~~G~~ai~la~~-~g~~~vv~v~~~~~---~~~~~~~lg~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      +|.|+|+ |-+|...++.+.. .+.+.+.+++++++   ..+..+-.|..  .+..+    .+    +.++    -..+|
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~----~~----l~~~----~~~~D   69 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVT----DD----LEEL----LEEAD   69 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEB----S-----HHHH----TTH-S
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccc----hh----HHHh----cccCC
Confidence            6889997 9999999998888 67765666666651   11111212211  11111    12    2222    23399


Q ss_pred             EEEEccCChHHHHHHHHhhcCCCEEEEEccCCC
Q 018075          254 VSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT  286 (361)
Q Consensus       254 ~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  286 (361)
                      ++||++. ++.....++.+...|.-+.+|.++-
T Consensus        70 VvIDfT~-p~~~~~~~~~~~~~g~~~ViGTTG~  101 (124)
T PF01113_consen   70 VVIDFTN-PDAVYDNLEYALKHGVPLVIGTTGF  101 (124)
T ss_dssp             EEEEES--HHHHHHHHHHHHHHT-EEEEE-SSS
T ss_pred             EEEEcCC-hHHhHHHHHHHHhCCCCEEEECCCC
Confidence            9999985 5566666666666677777776553

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK06436 glycerate dehydrogenase; Provisional

Probab=93.75  E-value=0.77  Score=41.53  Aligned_cols=87  Identities=22%  Similarity=0.226  Sum_probs=59.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      .|.+|.|+|.|.+|...+++++.+|. .|++.+++...      .+....  +    .++.    ++.    ...|+|+.
T Consensus       121 ~gktvgIiG~G~IG~~vA~~l~afG~-~V~~~~r~~~~------~~~~~~--~----~~l~----ell----~~aDiv~~  179 (303)
T PRK06436        121 YNKSLGILGYGGIGRRVALLAKAFGM-NIYAYTRSYVN------DGISSI--Y----MEPE----DIM----KKSDFVLI  179 (303)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcc------cCcccc--c----CCHH----HHH----hhCCEEEE
Confidence            58999999999999999999999999 68888765321      122110  0    1222    221    35899998


Q ss_pred             ccCChHHH-----HHHHHhhcCCCEEEEEccCC
Q 018075          258 CVGFDKTM-----STALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       258 ~~g~~~~~-----~~~~~~l~~~G~~v~~g~~~  285 (361)
                      +.......     ...+..|+++..++-++...
T Consensus       180 ~lp~t~~T~~li~~~~l~~mk~ga~lIN~sRG~  212 (303)
T PRK06436        180 SLPLTDETRGMINSKMLSLFRKGLAIINVARAD  212 (303)
T ss_pred             CCCCCchhhcCcCHHHHhcCCCCeEEEECCCcc
Confidence            87754322     34678899998887776554

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=93.75  E-value=0.62  Score=40.16  Aligned_cols=74  Identities=18%  Similarity=0.256  Sum_probs=53.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHH--HcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEc
Q 018075          181 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR--NLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  258 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~--~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  258 (361)
                      +++|+|+|.+|...++.+...|. .|+.++.++++.+...  ++....+.- +..+   .+.   +.+.+-..+|+++-+
T Consensus         2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~~~v~g-d~t~---~~~---L~~agi~~aD~vva~   73 (225)
T COG0569           2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDTHVVIG-DATD---EDV---LEEAGIDDADAVVAA   73 (225)
T ss_pred             EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcceEEEEe-cCCC---HHH---HHhcCCCcCCEEEEe
Confidence            57899999999999999999999 5899999998876633  355544332 2221   223   333456789999999


Q ss_pred             cCCh
Q 018075          259 VGFD  262 (361)
Q Consensus       259 ~g~~  262 (361)
                      .|.+
T Consensus        74 t~~d   77 (225)
T COG0569          74 TGND   77 (225)
T ss_pred             eCCC
Confidence            9975

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=93.74  E-value=0.88  Score=41.68  Aligned_cols=93  Identities=12%  Similarity=0.097  Sum_probs=62.6

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEe----ecCC---CccchhHHHHHHHhhcCCCc
Q 018075          180 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETA----KVST---DIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       180 ~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~----~~~~---~~~~~~~~~~~~~~~~~~~~  252 (361)
                      -+|.|+|+|.+|.+.+..+...|. .|...++++++.+.+.+.+.....    ....   ...+..    +.    -...
T Consensus         5 m~I~iIG~G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~----e~----~~~a   75 (328)
T PRK14618          5 MRVAVLGAGAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPE----EA----LAGA   75 (328)
T ss_pred             CeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHH----HH----HcCC
Confidence            478999999999999998888888 577788888777666654321100    0000   001111    11    1468


Q ss_pred             cEEEEccCChHHHHHHHHhhcCCCEEEEEc
Q 018075          253 DVSFDCVGFDKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       253 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      |+||-++... ..+..++.++++-.++.+.
T Consensus        76 D~Vi~~v~~~-~~~~v~~~l~~~~~vi~~~  104 (328)
T PRK14618         76 DFAVVAVPSK-ALRETLAGLPRALGYVSCA  104 (328)
T ss_pred             CEEEEECchH-HHHHHHHhcCcCCEEEEEe
Confidence            9999999977 6788888888887766664

>PRK06181 short chain dehydrogenase; Provisional

Probab=93.70  E-value=0.9  Score=39.88  Aligned_cols=81  Identities=21%  Similarity=0.319  Sum_probs=48.2

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-H---HcCCCE-EeecC-CCccchhHHHHHHHhhcCCC
Q 018075          179 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-R---NLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       179 g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~---~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~  251 (361)
                      +.++||.| +|.+|..+++.+...|. .|+.+++++++.+.+ +   ..+... .+..+ .+.......+.++... -.+
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~~   78 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVAR-FGG   78 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cCC
Confidence            35789998 59999999998888898 678887876554322 2   223221 11111 1222333333333221 246


Q ss_pred             ccEEEEccCC
Q 018075          252 IDVSFDCVGF  261 (361)
Q Consensus       252 ~d~vld~~g~  261 (361)
                      +|+++.+.|.
T Consensus        79 id~vi~~ag~   88 (263)
T PRK06181         79 IDILVNNAGI   88 (263)
T ss_pred             CCEEEECCCc
Confidence            9999999864

>cd02440 AdoMet_MTases S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy)

Probab=93.69  E-value=0.87  Score=32.73  Aligned_cols=91  Identities=23%  Similarity=0.296  Sum_probs=55.1

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH---c-CCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          182 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN---L-GADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       182 vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~---l-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      ++-.|+|. |....++++ .....+++++.+++..+.+++   . +...+..+.   .++.+...    ....++|+++.
T Consensus         2 ildig~G~-G~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~----~~~~~~d~i~~   72 (107)
T cd02440           2 VLDLGCGT-GALALALAS-GPGARVTGVDISPVALELARKAAAALLADNVEVLK---GDAEELPP----EADESFDVIIS   72 (107)
T ss_pred             eEEEcCCc-cHHHHHHhc-CCCCEEEEEeCCHHHHHHHHHHHhcccccceEEEE---cChhhhcc----ccCCceEEEEE
Confidence            55568765 667777777 444489999999887777662   1 111111111   12222211    12467999988


Q ss_pred             ccCC-------hHHHHHHHHhhcCCCEEEEE
Q 018075          258 CVGF-------DKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       258 ~~g~-------~~~~~~~~~~l~~~G~~v~~  281 (361)
                      ....       ...+..+.+.++++|.++..
T Consensus        73 ~~~~~~~~~~~~~~l~~~~~~l~~~g~~~~~  103 (107)
T cd02440          73 DPPLHHLVEDLARFLEEARRLLKPGGVLVLT  103 (107)
T ss_pred             ccceeehhhHHHHHHHHHHHHcCCCCEEEEE
Confidence            5543       23567778889999998754

There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=93.68  E-value=0.96  Score=40.22  Aligned_cols=88  Identities=18%  Similarity=0.165  Sum_probs=57.8

Q ss_pred             CEEEEECCCHHHHHHHHHHHH--cCCCEEEEEeCChhHHH-HHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075          180 TNVMIMGSGPIGLVTLLAARA--FGAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  256 (361)
Q Consensus       180 ~~vlI~G~g~~G~~ai~la~~--~g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  256 (361)
                      -+|.|+|+|.+|...++.+..  .+.+.+...++++++.+ ++++++.....      .++.+    +.    ...|+|+
T Consensus         7 irIGIIG~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~g~~~~~------~~~ee----ll----~~~D~Vv   72 (271)
T PRK13302          7 LRVAIAGLGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLRRPPPV------VPLDQ----LA----THADIVV   72 (271)
T ss_pred             eEEEEECccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhcCCCccc------CCHHH----Hh----cCCCEEE
Confidence            578999999999887776654  36644445566666543 45556632211      12222    21    2479999


Q ss_pred             EccCChHHHHHHHHhhcCCCEEEEE
Q 018075          257 DCVGFDKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       257 d~~g~~~~~~~~~~~l~~~G~~v~~  281 (361)
                      .|++...+.+.....|..|-.++..
T Consensus        73 i~tp~~~h~e~~~~aL~aGk~Vi~~   97 (271)
T PRK13302         73 EAAPASVLRAIVEPVLAAGKKAIVL   97 (271)
T ss_pred             ECCCcHHHHHHHHHHHHcCCcEEEe
Confidence            9999887777778888877766654

>PRK06720 hypothetical protein; Provisional

Probab=93.68  E-value=1.4  Score=36.14  Aligned_cols=82  Identities=26%  Similarity=0.306  Sum_probs=48.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HHH---cCCCE-EeecCC-CccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARN---LGADE-TAKVST-DIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~---lg~~~-~~~~~~-~~~~~~~~~~~~~~~~~~  250 (361)
                      ++..++|.| ++++|...+..+...|+ .|+.++++.++.+. +++   .+... .+..+- +..++.+.+.++... -+
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~-~G   92 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNA-FS   92 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH-cC
Confidence            577899998 58999999988888898 57777776654422 222   24321 222211 122333333333221 24


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|+++++.|.
T Consensus        93 ~iDilVnnAG~  103 (169)
T PRK06720         93 RIDMLFQNAGL  103 (169)
T ss_pred             CCCEEEECCCc
Confidence            68999998873

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=93.64  E-value=1.1  Score=40.84  Aligned_cols=38  Identities=24%  Similarity=0.205  Sum_probs=32.0

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH
Q 018075          180 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSI  218 (361)
Q Consensus       180 ~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~  218 (361)
                      .+|.|+|+|.+|...++.+...|. .|...+.+++..+.
T Consensus         8 ~~VaVIGaG~MG~giA~~~a~aG~-~V~l~D~~~~~~~~   45 (321)
T PRK07066          8 KTFAAIGSGVIGSGWVARALAHGL-DVVAWDPAPGAEAA   45 (321)
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHH
Confidence            589999999999999998888999 68888888775543

>PRK08291 ectoine utilization protein EutC; Validated

Probab=93.63  E-value=1.6  Score=40.08  Aligned_cols=93  Identities=17%  Similarity=0.241  Sum_probs=58.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEEeCChhHHHHH-HHc----CCCEEeecCCCccchhHHHHHHHhhcCC
Q 018075          177 GPETNVMIMGSGPIGLVTLLAAR-AFGAPRIIITDVDVQRLSIA-RNL----GADETAKVSTDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~-~~g~~~vv~v~~~~~~~~~~-~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (361)
                      +...+++|+|+|..|.+.+..+. ..+.+.+...+++.++.+.+ +++    +.. +..+    .+..+.+        .
T Consensus       130 ~~~~~v~IiGaG~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~-v~~~----~d~~~al--------~  196 (330)
T PRK08291        130 EDASRAAVIGAGEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIP-VTVA----RDVHEAV--------A  196 (330)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCce-EEEe----CCHHHHH--------c
Confidence            44578999999999988776555 46777888888888876543 433    322 1111    1222222        3


Q ss_pred             CccEEEEccCChH-HHHHHHHhhcCCCEEEEEccC
Q 018075          251 GIDVSFDCVGFDK-TMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       251 ~~d~vld~~g~~~-~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      +.|+|+.+..... .+..  ..++++-++..+|..
T Consensus       197 ~aDiVi~aT~s~~p~i~~--~~l~~g~~v~~vg~d  229 (330)
T PRK08291        197 GADIIVTTTPSEEPILKA--EWLHPGLHVTAMGSD  229 (330)
T ss_pred             cCCEEEEeeCCCCcEecH--HHcCCCceEEeeCCC
Confidence            5899999877542 1222  347888888887754

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=93.63  E-value=0.68  Score=40.79  Aligned_cols=82  Identities=26%  Similarity=0.341  Sum_probs=49.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH----HHcCCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      ++.++||.| ++++|...+..+...|+ .++.++++.++.+.+    ++.+... .+..+ .+..+......++... -+
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~~   86 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKE-VG   86 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh-CC
Confidence            567899998 58999998888888899 467777776654322    2234321 12211 2222333333333322 24


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|+++.+.|.
T Consensus        87 ~id~li~~ag~   97 (265)
T PRK07097         87 VIDILVNNAGI   97 (265)
T ss_pred             CCCEEEECCCC
Confidence            69999998874

>PRK09134 short chain dehydrogenase; Provisional

Probab=93.61  E-value=0.64  Score=40.74  Aligned_cols=83  Identities=17%  Similarity=0.207  Sum_probs=46.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHH---cCCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARN---LGADE-TAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~---lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      .+.++||.| +|.+|...++.+...|++.++...++.++.+ ..++   .+... .+..+ .+..+....+.++... ..
T Consensus         8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~-~~   86 (258)
T PRK09134          8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAA-LG   86 (258)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH-cC
Confidence            467899998 5999999999888899854343443444332 2222   23321 11111 1222333333333322 24


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|+++.+.|.
T Consensus        87 ~iD~vi~~ag~   97 (258)
T PRK09134         87 PITLLVNNASL   97 (258)
T ss_pred             CCCEEEECCcC
Confidence            79999999874

>PF05175 MTS: Methyltransferase small domain; InterPro: IPR007848 This domain is found in ribosomal RNA small subunit methyltransferase C and in other methyltransferases

Probab=93.58  E-value=0.42  Score=39.18  Aligned_cols=98  Identities=20%  Similarity=0.343  Sum_probs=62.4

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhhcCCCcc
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      ++.++|-+|+|. |..++.+++......|++++.+++..+.+++    .+...+..+..   ++.+.   +   ....||
T Consensus        31 ~~~~vLDlG~G~-G~i~~~la~~~~~~~v~~vDi~~~a~~~a~~n~~~n~~~~v~~~~~---d~~~~---~---~~~~fD  100 (170)
T PF05175_consen   31 KGGRVLDLGCGS-GVISLALAKRGPDAKVTAVDINPDALELAKRNAERNGLENVEVVQS---DLFEA---L---PDGKFD  100 (170)
T ss_dssp             TTCEEEEETSTT-SHHHHHHHHTSTCEEEEEEESBHHHHHHHHHHHHHTTCTTEEEEES---STTTT---C---CTTCEE
T ss_pred             cCCeEEEecCCh-HHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCccccccccc---ccccc---c---ccccee
Confidence            778899998765 6666677776544369999999988777655    44442211111   22111   1   146899


Q ss_pred             EEEEcc----CCh-------HHHHHHHHhhcCCCEEEEEccCC
Q 018075          254 VSFDCV----GFD-------KTMSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       254 ~vld~~----g~~-------~~~~~~~~~l~~~G~~v~~g~~~  285 (361)
                      +|+...    +..       ..+..+.+.|+++|++..+....
T Consensus       101 ~Iv~NPP~~~~~~~~~~~~~~~i~~a~~~Lk~~G~l~lv~~~~  143 (170)
T PF05175_consen  101 LIVSNPPFHAGGDDGLDLLRDFIEQARRYLKPGGRLFLVINSH  143 (170)
T ss_dssp             EEEE---SBTTSHCHHHHHHHHHHHHHHHEEEEEEEEEEEETT
T ss_pred             EEEEccchhcccccchhhHHHHHHHHHHhccCCCEEEEEeecC
Confidence            998853    221       24667888999999998765443

; GO: 0008168 methyltransferase activity; PDB: 1WY7_A 1DUS_A 2OZV_A 2PJD_A 1VQ1_A 1NV9_A 1SG9_C 1NV8_A 3Q87_B 3DMF_A ....

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=93.57  E-value=2  Score=31.10  Aligned_cols=86  Identities=22%  Similarity=0.276  Sum_probs=53.8

Q ss_pred             EEEEECCCHHHHHHHHHHHHcC---CCEEEEEeCChhHHHHH-HHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075          181 NVMIMGSGPIGLVTLLAARAFG---APRIIITDVDVQRLSIA-RNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  256 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~g---~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  256 (361)
                      ++.|+|+|.+|.+.+.-+...|   .+..++.++++++.+.+ ++++.....      .+..+.+        ...|+||
T Consensus         1 kI~iIG~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~------~~~~~~~--------~~advvi   66 (96)
T PF03807_consen    1 KIGIIGAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATA------DDNEEAA--------QEADVVI   66 (96)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEES------EEHHHHH--------HHTSEEE
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhcccccc------CChHHhh--------ccCCEEE
Confidence            5778899999999999888888   64333558888876554 666643321      1222222        2589999


Q ss_pred             EccCChHHHHHHHHh---hcCCCEEEEE
Q 018075          257 DCVGFDKTMSTALNA---TRPGGKVCLI  281 (361)
Q Consensus       257 d~~g~~~~~~~~~~~---l~~~G~~v~~  281 (361)
                      -|+... .+.+.++.   +.++..++.+
T Consensus        67 lav~p~-~~~~v~~~i~~~~~~~~vis~   93 (96)
T PF03807_consen   67 LAVKPQ-QLPEVLSEIPHLLKGKLVISI   93 (96)
T ss_dssp             E-S-GG-GHHHHHHHHHHHHTTSEEEEE
T ss_pred             EEECHH-HHHHHHHHHhhccCCCEEEEe
Confidence            999855 55555554   4456655544

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK06932 glycerate dehydrogenase; Provisional

Probab=93.56  E-value=1.5  Score=39.83  Aligned_cols=86  Identities=13%  Similarity=0.151  Sum_probs=57.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      .|.++.|+|.|.+|...+++++.+|+ .|++.+.....     ....    .+    .++.+.+        ...|+|.-
T Consensus       146 ~gktvgIiG~G~IG~~va~~l~~fg~-~V~~~~~~~~~-----~~~~----~~----~~l~ell--------~~sDiv~l  203 (314)
T PRK06932        146 RGSTLGVFGKGCLGTEVGRLAQALGM-KVLYAEHKGAS-----VCRE----GY----TPFEEVL--------KQADIVTL  203 (314)
T ss_pred             CCCEEEEECCCHHHHHHHHHHhcCCC-EEEEECCCccc-----cccc----cc----CCHHHHH--------HhCCEEEE
Confidence            47899999999999999999999999 57777653210     0110    00    1222222        35788887


Q ss_pred             ccCChHHH-----HHHHHhhcCCCEEEEEccCC
Q 018075          258 CVGFDKTM-----STALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       258 ~~g~~~~~-----~~~~~~l~~~G~~v~~g~~~  285 (361)
                      +..-....     ...+..|+++..++-++...
T Consensus       204 ~~Plt~~T~~li~~~~l~~mk~ga~lIN~aRG~  236 (314)
T PRK06932        204 HCPLTETTQNLINAETLALMKPTAFLINTGRGP  236 (314)
T ss_pred             cCCCChHHhcccCHHHHHhCCCCeEEEECCCcc
Confidence            66533222     44678899999888776554

>PRK06114 short chain dehydrogenase; Provisional

Probab=93.54  E-value=0.95  Score=39.59  Aligned_cols=82  Identities=15%  Similarity=0.254  Sum_probs=49.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChh-H-HHHHHH---cCCCE-EeecC-CCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ-R-LSIARN---LGADE-TAKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~-~-~~~~~~---lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      ++.++||.| ++++|.+.++.+...|+ .++.++++.+ . .+.+++   .+... .+..+ .+..+..+.+.++... .
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~-~   84 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAE-L   84 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence            467899998 68999999998888999 5666666532 2 223222   33221 12111 2223344444444332 2


Q ss_pred             CCccEEEEccCC
Q 018075          250 SGIDVSFDCVGF  261 (361)
Q Consensus       250 ~~~d~vld~~g~  261 (361)
                      +++|+++++.|.
T Consensus        85 g~id~li~~ag~   96 (254)
T PRK06114         85 GALTLAVNAAGI   96 (254)
T ss_pred             CCCCEEEECCCC
Confidence            569999999874

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	361
1e3j_A	352	Ketose Reductase (Sorbitol Dehydrogenase) From Silv		4e-86
1pl7_A	356	Human Sorbitol Dehydrogenase (Apo) Length = 356		2e-84
3qe3_A	355	Sheep Liver Sorbitol Dehydrogenase Length = 355		6e-83
1pl6_A	356	Human SdhNADHINHIBITOR COMPLEX Length = 356		1e-82
3m6i_A	363	L-Arabinitol 4-Dehydrogenase Length = 363		5e-56
2dfv_A	347	Hyperthermophilic Threonine Dehydrogenase From Pyro		4e-44
2d8a_A	348	Crystal Structure Of Ph0655 From Pyrococcus Horikos		4e-44
3gfb_A	350	L-Threonine Dehydrogenase (Tktdh) From The Hyperthe		8e-44
2dq4_A	343	Crystal Structure Of Threonine 3-Dehydrogenase Leng		2e-41
4ej6_A	370	Crystal Structure Of A Putative Zinc-Binding Dehydr		2e-36
4ilk_A	359	Crystal Structure Of Short Chain Alcohol Dehydrogen		1e-35
4a2c_A	346	Crystal Structure Of Galactitol-1-Phosphate Dehydro		2e-32
1rjw_A	339	Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd		2e-28
3pii_A	339	Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog		3e-28
2eer_A	347	Structural Study Of Project Id St2577 From Sulfolob		5e-26
4eez_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		2e-25
4eex_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		9e-25
2xaa_A	345	Alcohol Dehydrogenase Adh-'a' From Rhodococcus Rube		4e-24
2eih_A	343	Crystal Structure Of Nad-Dependent Alcohol Dehydrog		5e-24
1e3e_A	376	Mouse Class Ii Alcohol Dehydrogenase Complex With N		5e-23
1e3l_A	376	P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase		5e-23
3uko_A	378	Crystal Structure Of S-Nitrosoglutathione Reductase		9e-23
3ip1_A	404	Structure Of Putative Alcohol Dehydrogenase (Tm_042		2e-22
1r37_A	347	Alcohol Dehydrogenase From Sulfolobus Solfataricus		5e-22
1h2b_A	359	Crystal Structure Of The Alcohol Dehydrogenase From		5e-22
1nto_A	347	N249y Mutant Of Alcohol Dehydrogenase From The Arch		9e-22
3meq_A	365	Crystal Structure Of Alcohol Dehydrogenase From Bru		1e-21
3i4c_A	347	Crystal Structure Of Sulfolobus Solfataricus Adh(Ss		2e-21
4dl9_A	396	Crystal Structure Of S-nitrosoglutathione Reductase		3e-21
1hdz_A	374	Three-Dimensional Structures Of Three Human Alcohol		4e-21
1vj0_A	380	Crystal Structure Of Alcohol Dehydrogenase (Tm0436)		5e-21
3s1l_A	340	Crystal Structure Of Apo-Form Furx Length = 340		7e-21
1llu_A	342	The Ternary Complex Of Pseudomonas Aeruginosa Alcoh		7e-21
1ht0_A	374	Human Gamma-2 Alcohol Dehydrogense Length = 374		2e-20
1jvb_A	347	Alcohol Dehydrogenase From The Archaeon Sulfolobus		2e-20
1ee2_A	373	The Structure Of Steroid-Active Alcohol Dehydrogena		2e-20
1ee2_B	373	The Structure Of Steroid-Active Alcohol Dehydrogena		2e-20
1mgo_A	374	Horse Liver Alcohol Dehydrogenase Phe93ala Mutant L		2e-20
1hdy_A	374	Three-Dimensional Structures Of Three Human Alcohol		3e-20
1htb_A	374	Crystallization Of Human Beta3 Alcohol Dehydrogenas		3e-20
1hdx_A	374	Three-Dimensional Structures Of Three Human Alcohol		3e-20
1axe_A	374	Crystal Structure Of The Active-Site Mutant Phe93->		4e-20
6adh_A	374	Structure Of Triclinic Ternary Complex Of Horse Liv		4e-20
3cos_A	381	Crystal Structure Of Human Class Ii Alcohol Dehydro		5e-20
1n8k_A	374	Horse Liver Alcohol Dehydrogenase Val292thr Mutant		6e-20
1ju9_A	374	Horse Liver Alcohol Dehydrogenase Val292ser Mutant		6e-20
3oq6_A	374	Horse Liver Alcohol Dehydrogenase A317c Mutant Comp		6e-20
1hso_A	374	Human Alpha Alcohol Dehydrogenase (Adh1a) Length =		6e-20
1qv6_A	374	Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG		9e-20
1a71_A	374	Ternary Complex Of An Active Site Double Mutant Of		1e-19
1qlh_A	374	Horse Liver Alcohol Dehydrogenase Complexed To Nad		2e-19
1axg_A	374	Crystal Structure Of The Val203->ala Mutant Of Live		2e-19
1f8f_A	371	Crystal Structure Of Benzyl Alcohol Dehydrogenase F		2e-19
1mc5_A	374	Ternary Complex Of Human Glutathione-Dependent Form		3e-18
3qj5_A	374	S-Nitrosoglutathione Reductase (Gsnor) In Complex W		3e-18
1teh_A	373	Structure Of Human Liver Chichi Alcohol Dehydrogena		3e-18
1cdo_A	374	Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Co		5e-18
1p0c_A	373	Crystal Structure Of The Nadp(H)-Dependent Vertebra		6e-18
2fzw_A	373	Structure Of The Binary Complex Of The E67l Mutant		3e-17
1d1t_A	373	Mutant Of Human Sigma Alcohol Dehydrogenase With Le		1e-16
1agn_A	373	X-Ray Structure Of Human Sigma Alcohol Dehydrogenas		1e-16
1y9a_A	360	Alcohol Dehydrogenase From Entamoeba Histolotica In		1e-15
2dph_A	398	Crystal Structure Of Formaldehyde Dismutase Length		1e-15
2oui_A	360	D275p Mutant Of Alcohol Dehydrogenase From Protozoa		2e-15
3fpl_A	351	Chimera Of Alcohol Dehydrogenase By Exchange Of The		4e-15
2nvb_A	352	Contribution Of Pro275 To The Thermostability Of Th		5e-15
1ykf_A	352	Nadp-Dependent Alcohol Dehydrogenase From Thermoana		6e-15
1kol_A	398	Crystal Structure Of Formaldehyde Dehydrogenase Len		6e-15
2h6e_A	344	Crystal Structure Of The D-Arabinose Dehydrogenase		1e-14
1jqb_A	351	Alcohol Dehydrogenase From Clostridium Beijerinckii		4e-14
1yqd_A	366	Sinapyl Alcohol Dehydrogenase Complexed With Nadp+		6e-14
3fsr_A	352	Chimera Of Alcohol Dehydrogenase By Exchange Of The		1e-13
1ped_A	351	Bacterial Secondary Alcohol Dehydrogenase (Apo-Form		1e-13
3ftn_A	352	Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDRO		1e-13
2b83_A	351	A Single Amino Acid Substitution In The Clostridium		2e-13
3fpc_A	352	Chimera Of Alcohol Dehydrogenase By Exchange Of The		7e-13
3jyl_A	325	Crystal Structures Of Pseudomonas Syringae Pv. Toma		1e-12
1wly_A	333	Crystal Structure Of 2-haloacrylate Reductase Lengt		2e-12
3two_A	348	The Crystal Structure Of Cad From Helicobacter Pylo		6e-11
1uuf_A	369	Crystal Structure Of A Zinc-Type Alcohol Dehydrogen		1e-09
2hcy_A	347	Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevi		2e-09
1ps0_A	360	Crystal Structure Of The Nadp(H)-Dependent Cinnamyl		4e-09
4a27_A	349	Crystal Structure Of Human Synaptic Vesicle Membran		9e-09
3qwa_A	334	Crystal Structure Of Saccharomyces Cerevisiae Zeta-		2e-08
2cf5_A	357	Crystal Structures Of The Arabidopsis Cinnamyl Alco		4e-08
3uog_A	363	Crystal Structure Of Putative Alcohol Dehydrogenase		6e-08
3fbg_A	346	Crystal Structure Of A Putative Arginate Lyase From		6e-08
1yb5_A	351	Crystal Structure Of Human Zeta-crystallin With Bou		5e-07
3krt_A	456	Crystal Structure Of Putative Crotonyl Coa Reductas		1e-06
2cd9_A	366	Sulfolobus Solfataricus Glucose Dehydrogenase 1 - A		2e-05
2cdb_A	366	Sulfolobus Solfataricus Glucose Dehydrogenase 1 In		2e-05
3goh_A	315	Crystal Structure Of Alcohol Dehydrogenase Superfam		3e-05
2b5w_A	357	Crystal Structure Of D38c Glucose Dehydrogenase Mut		4e-05
2b5v_A	357	Crystal Structure Of Glucose Dehydrogenase From Hal		4e-04
4dup_A	353	Crystal Structure Of A Quinone Oxidoreductase From		7e-04

>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf Whitefly Length = 352

Iteration: 1
 Score =  314 bits (805), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 159/349 (45%), Positives = 232/349 (66%), Gaps = 4/349 (1%)
Query: 13  NQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPM 72
           + N++A L     L+++   +P     +V +++  +GICGSDVH+++  R A+FIVK PM
Sbjct: 3   SDNLSAVLYKQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPM 62
Query: 73  VIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTN 132
           VIGHE +G + +VG  VK L+ GDRVA+EPG+ C  C  CK G YNLCP++ F  +PP +
Sbjct: 63  VIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDD 122
Query: 133 GSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGL 192
           G+LA   VH A  C+KLPDNVSLEEGA+ EPLSVGVHACRRA V   T V+++G+GPIGL
Sbjct: 123 GNLARYYVHAADFCHKLPDNVSLEEGALLEPLSVGVHACRRAGVQLGTTVLVIGAGPIGL 182
Query: 193 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI 252
           V++LAA+A+GA  ++ T    +RL +A+N GAD T  V    E+  + + +I++A+G   
Sbjct: 183 VSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLP 241
Query: 253 DVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTW 312
           +V+ DC G +K ++  +N TR GG + L+G+    +TV L  A ARE+D+  +FRY + +
Sbjct: 242 NVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYCNDY 301
Query: 313 PLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEIS-AQGGNAIKVMFN 360
           P+ +E + SG+ +VK L+TH F   Q    DAFE +  +  N IKVM +
Sbjct: 302 PIALEMVASGRCNVKQLVTHSFKLEQ--TVDAFEAARKKADNTIKVMIS 348

>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo) Length = 356

Iteration: 1
 Score =  308 bits (790), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 158/349 (45%), Positives = 226/349 (64%), Gaps = 5/349 (1%)
Query: 12  KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKP 71
           K  N++  + G   L+++ Y +P  GP +V +R+ ++GICGSDVH+++  R  NFIVKKP
Sbjct: 5   KPNNLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKP 64
Query: 72  MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT 131
           MV+GHE +G +E+VGS VK L+ GDRVA+EPG    +   CK G YNL P + F  +PP 
Sbjct: 65  MVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPD 124
Query: 132 NGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIG 191
           +G+L     H A  CYKLPDNV+ EEGA+ EPLSVG+HACRR  V     V++ G+GPIG
Sbjct: 125 DGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIG 184
Query: 192 LVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG 251
           +VTLL A+A GA ++++TD+   RLS A+ +GAD   ++S   E       K++  +G  
Sbjct: 185 MVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISK--ESPQEIARKVEGQLGCK 242
Query: 252 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRST 311
            +V+ +C G + ++   + ATR GG + L+GL     TV L  AA REVD+ G+FRY +T
Sbjct: 243 PEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNT 302
Query: 312 WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 360
           WP+ I  L S  ++VKPL+THRF   +K +E AFE + + G  +K+M  
Sbjct: 303 WPVAISMLASKSVNVKPLVTHRFPL-EKALE-AFE-TFKKGLGLKIMLK 348

>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase Length = 355

Iteration: 1
 Score =  304 bits (778), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 154/346 (44%), Positives = 226/346 (65%), Gaps = 5/346 (1%)
Query: 14  QNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMV 73
           +N++  + G   L+++ Y +P  GP +V +++ ++GICGSDVH+++  R  +F+VKKPMV
Sbjct: 6   ENLSLVVHGPGDLRLENYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRIGDFVVKKPMV 65
Query: 74  IGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNG 133
           +GHE +G + +VGS V+ L+ GDRVA++PG        CK G YNL P + F  +PP +G
Sbjct: 66  LGHEASGTVVKVGSLVRHLQPGDRVAIQPGAPRQTDEFCKIGRYNLSPTIFFCATPPDDG 125
Query: 134 SLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLV 193
           +L     H A  CYKLPDNV+ EEGA+ EPLSVG+HACRRA V     V++ G+GPIGLV
Sbjct: 126 NLCRFYKHNANFCYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCGAGPIGLV 185
Query: 194 TLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGID 253
            LLAA+A GA ++++TD+   RLS A+ +GAD   ++S   E  +    K++  +GS  +
Sbjct: 186 NLLAAKAMGAAQVVVTDLSASRLSKAKEVGADFILEISN--ESPEEIAKKVEGLLGSKPE 243
Query: 254 VSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWP 313
           V+ +C G + ++   + AT  GG + L+GL     +V L  AA REVD+ G+FRY +TWP
Sbjct: 244 VTIECTGVETSIQAGIYATHSGGTLVLVGLGSEMTSVPLVHAATREVDIKGVFRYCNTWP 303
Query: 314 LCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 359
           + I  L S  ++VKPL+THRF   +K +E AFE S + G  +KVM 
Sbjct: 304 MAISMLASKSVNVKPLVTHRFPL-EKALE-AFETSKK-GLGLKVMI 346

>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX Length = 356

Iteration: 1
 Score =  302 bits (774), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 155/340 (45%), Positives = 218/340 (64%), Gaps = 4/340 (1%)
Query: 12  KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKP 71
           K  N++  + G   L+++ Y +P  GP +V +R  ++GICGSDVH+++  R  NFIVKKP
Sbjct: 5   KPNNLSLVVHGPGDLRLENYPIPEPGPNEVLLRXHSVGICGSDVHYWEYGRIGNFIVKKP 64
Query: 72  MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT 131
            V+GHE +G +E+VGS VK L+ GDRVA+EPG    +   CK G YNL P + F  +PP 
Sbjct: 65  XVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKXGRYNLSPSIFFCATPPD 124
Query: 132 NGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIG 191
           +G+L     H A  CYKLPDNV+ EEGA+ EPLSVG+HACRR  V     V++ G+GPIG
Sbjct: 125 DGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIG 184
Query: 192 LVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG 251
            VTLL A+A GA ++++TD+   RLS A+ +GAD   ++S   E       K++  +G  
Sbjct: 185 XVTLLVAKAXGAAQVVVTDLSATRLSKAKEIGADLVLQISK--ESPQEIARKVEGQLGCK 242
Query: 252 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRST 311
            +V+ +C G + ++   + ATR GG + L+GL     TV L  AA REVD+ G+FRY +T
Sbjct: 243 PEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEXTTVPLLHAAIREVDIKGVFRYCNT 302
Query: 312 WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG 351
           WP+ I  L S  ++VKPL+THRF   +K +E AFE   +G
Sbjct: 303 WPVAISXLASKSVNVKPLVTHRFPL-EKALE-AFETFKKG 340

>pdb|3M6I|A Chain A, L-Arabinitol 4-Dehydrogenase Length = 363

Iteration: 1
 Score =  214 bits (546), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 128/324 (39%), Positives = 186/324 (57%), Gaps = 8/324 (2%)
Query: 40  DVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVA 99
           +V V +++ GICGSDVH +K       IV+   V+GHE AG +  V   VKS++VGDRVA
Sbjct: 42  EVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGEVIAVHPSVKSIKVGDRVA 101
Query: 100 LEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGA 159
           +EP + C  C  C  G YN C  + F  +PP  G L   V HPA  C+K+  N+S E GA
Sbjct: 102 IEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKI-GNMSYENGA 160
Query: 160 MCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA 219
           M EPLSV +   +RA V     V+I G+GPIGL+T+L A+A GA  ++ITD+D  RL  A
Sbjct: 161 MLEPLSVALAGLQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFA 220
Query: 220 RNLGADETAKVSTDIEDVDTDVGKIQNAMGSGID--VSFDCVGFDKTMSTALNATRPGGK 277
           + +   E      +    +    KI  + G GI+  V+ +C G + +++ A+ A + GGK
Sbjct: 221 KEI-CPEVVTHKVERLSAEESAKKIVESFG-GIEPAVALECTGVESSIAAAIWAVKFGGK 278
Query: 278 VCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFT 337
           V +IG+ K E+ +    A+ REVD+   +RY +TWP  I  + +G +D+  L+THRF   
Sbjct: 279 VFVIGVGKNEIQIPFMRASVREVDLQFQYRYCNTWPRAIRLVENGLVDLTRLVTHRFPL- 337
Query: 338 QKEIEDAFEISAQ-GGNAIKVMFN 360
            ++   AFE ++     AIKV   
Sbjct: 338 -EDALKAFETASDPKTGAIKVQIQ 360

>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus Horikoshii Length = 347

Iteration: 1
 Score =  175 bits (443), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 112/335 (33%), Positives = 183/335 (54%), Gaps = 17/335 (5%)
Query: 33  LPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL 92
           +P  GP +V +++ A  ICG+D+H ++    A   +K P + GHE AG + E+G  V+ +
Sbjct: 23  VPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVEGI 82
Query: 93  EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDN 152
           EVGD V++E  I CG C  C+ G Y++C   + FG   T+G  A   V PA+  +K P +
Sbjct: 83  EVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGV-DTDGVFAEYAVVPAQNIWKNPKS 141
Query: 153 VSLEEGAMCEPLSVGVHACRRANVGPET--NVMIMGSGPIGLVTLLAARAFGAPRIIITD 210
           +  E   + EPL    +A      GP +  +V+I G+GP+GL+ +  A+A GA  +I+++
Sbjct: 142 IPPEYATLQEPLG---NAVDTVLAGPISGKSVLITGAGPLGLLGIAVAKASGAYPVIVSE 198
Query: 211 VDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALN 270
               R  +A+ +GAD    ++   EDV  +V  I +  G+G+DV  +  G  K +   L 
Sbjct: 199 PSDFRRELAKKVGADYV--INPFEEDVVKEVXDITD--GNGVDVFLEFSGAPKALEQGLQ 254
Query: 271 ATRPGGKVCLIGLAKTEMTVALTPAAA-REVDVIGIF--RYRSTWPLCIEFLRSGKIDVK 327
           A  P G+V L+GL   ++T+        + + + GI       TW      L+SGK+++ 
Sbjct: 255 AVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWYTVSRLLQSGKLNLD 314
Query: 328 PLITHRF-GFTQKEIEDAFEISAQGGNAIKVMFNL 361
           P+ITH++ GF +   E+AFE+  + G   KV+F L
Sbjct: 315 PIITHKYKGFDK--YEEAFELX-RAGKTGKVVFXL 346

>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3 Length = 348

Iteration: 1
 Score =  175 bits (443), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 112/335 (33%), Positives = 183/335 (54%), Gaps = 17/335 (5%)
Query: 33  LPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL 92
           +P  GP +V +++ A  ICG+D+H ++    A   +K P + GHE AG + E+G  V+ +
Sbjct: 24  VPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVEGI 83
Query: 93  EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDN 152
           EVGD V++E  I CG C  C+ G Y++C   + FG   T+G  A   V PA+  +K P +
Sbjct: 84  EVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGV-DTDGVFAEYAVVPAQNIWKNPKS 142
Query: 153 VSLEEGAMCEPLSVGVHACRRANVGPET--NVMIMGSGPIGLVTLLAARAFGAPRIIITD 210
           +  E   + EPL    +A      GP +  +V+I G+GP+GL+ +  A+A GA  +I+++
Sbjct: 143 IPPEYATLQEPLG---NAVDTVLAGPISGKSVLITGAGPLGLLGIAVAKASGAYPVIVSE 199
Query: 211 VDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALN 270
               R  +A+ +GAD    ++   EDV  +V  I +  G+G+DV  +  G  K +   L 
Sbjct: 200 PSDFRRELAKKVGADYV--INPFEEDVVKEVXDITD--GNGVDVFLEFSGAPKALEQGLQ 255
Query: 271 ATRPGGKVCLIGLAKTEMTVALTPAAA-REVDVIGIF--RYRSTWPLCIEFLRSGKIDVK 327
           A  P G+V L+GL   ++T+        + + + GI       TW      L+SGK+++ 
Sbjct: 256 AVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWYTVSRLLQSGKLNLD 315
Query: 328 PLITHRF-GFTQKEIEDAFEISAQGGNAIKVMFNL 361
           P+ITH++ GF +   E+AFE+  + G   KV+F L
Sbjct: 316 PIITHKYKGFDK--YEEAFELX-RAGKTGKVVFXL 347

>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The Hyperthermophilic Archaeon Thermococcus Kodakaraensis Length = 350

Iteration: 1
 Score =  174 bits (440), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 111/331 (33%), Positives = 175/331 (52%), Gaps = 12/331 (3%)
Query: 33  LPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL 92
           +P  GP +V +++ A  ICG+D+H ++    A   +K P ++GHE AG + EVG  V+ L
Sbjct: 24  VPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEVGPGVEDL 83
Query: 93  EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDN 152
           +VGD +++E  I CG C  CK   Y++C   + FG    +G  AH  + PAK  +K P +
Sbjct: 84  QVGDYISVETHIVCGKCYACKHNRYHVCQNTKIFGV-DMDGVFAHYAIVPAKNAWKNPKD 142
Query: 153 VSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 212
           +  E  A+ EPL   V       +   +  +I G+GP+GL+ +  A+A GA  +I+++  
Sbjct: 143 MPPEYAALQEPLGNAVDTVLAGPIAGRST-LITGAGPLGLLGIAVAKASGAYPVIVSEPS 201
Query: 213 VQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNAT 272
             R  +A+ +GAD    V+   ED    V  I +  G+G++V  +  G  K +   L A 
Sbjct: 202 EFRRKLAKKVGADYV--VNPFEEDPVKFVMDITD--GAGVEVFLEFSGAPKALEQGLKAV 257
Query: 273 RPGGKVCLIGLAKTEMTV---ALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPL 329
            PGG+V L+GL   E+T+    L    A EV  I       TW      ++SGK+++ P+
Sbjct: 258 TPGGRVSLLGLFPREVTIDFNNLIIFKALEVHGITGRHLWETWYTVSSLIQSGKLNLDPI 317
Query: 330 ITHRF-GFTQKEIEDAFEISAQGGNAIKVMF 359
           ITH++ GF +   E+AFE+   G     V F
Sbjct: 318 ITHKYKGFDK--FEEAFELMRAGKTGKVVFF 346

>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Length = 343

Iteration: 1
 Score =  166 bits (419), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 170/331 (51%), Gaps = 13/331 (3%)
Query: 33  LPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL 92
           +P  GP ++ VR++A  ICG+D+H +K    A   ++ P+V GHE +G++E VG  V+  
Sbjct: 20  VPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRP 79
Query: 93  EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDN 152
           +VGD V+LE  I C  C  C+ G+Y++C   +  G    +G  A  VV PA+  +  P +
Sbjct: 80  QVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGV-DRDGGFAEYVVVPAENAWVNPKD 138
Query: 153 VSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 212
           +  E  A+ EP    VH     +     +V+I G+GPIGL+  +  RA GA  I+++D +
Sbjct: 139 LPFEVAAILEPFGNAVHTVYAGSGVSGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPN 198
Query: 213 VQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNAT 272
             RL+ AR         +  D+ +V      ++   GSG++V  +  G +  +   L A 
Sbjct: 199 PYRLAFARPYADRLVNPLEEDLLEV------VRRVTGSGVEVLLEFSGNEAAIHQGLMAL 252
Query: 273 RPGGKVCLIGLAKTEMTVALT-PAAAREVDVIGIF--RYRSTWPLCIEFLRSGKIDVKPL 329
            PGG+  ++G+    +   L      R +   GI   R   TW      + SG++D+ PL
Sbjct: 253 IPGGEARILGIPSDPIRFDLAGELVMRGITAFGIAGRRLWQTWMQGTALVYSGRVDLSPL 312
Query: 330 ITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 360
           +THR   ++    +AF + A  G A+KV+ +
Sbjct: 313 LTHRLPLSR--YREAFGLLAS-GQAVKVILD 340

>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase (Target Psi-012003) From Sinorhizobium Meliloti 1021 Length = 370

Iteration: 1
 Score =  149 bits (376), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 158/329 (48%), Gaps = 9/329 (2%)
Query: 12  KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKP 71
           ++   A  L  +  + ++   +P  GP D+ V+++A GICG+D H         F    P
Sbjct: 21  QSXXKAVRLESVGNISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLH----GEFPSTPP 76
Query: 72  MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT 131
           + +GHE  GI+ E GS V+ +  G R+  +P ISCG C  C+AG  NLC  +R  G    
Sbjct: 77  VTLGHEFCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGI-HR 135
Query: 132 NGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIG 191
           +G  A  V+ P K  +++P  +    GA CEPL+  +H    + +   + V I+G G IG
Sbjct: 136 DGGFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCLHGVDLSGIKAGSTVAILGGGVIG 195
Query: 192 LVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG 251
           L+T+  AR  GA  +I++     +  +A  +GA  TA V     DV   +      +  G
Sbjct: 196 LLTVQLARLAGATTVILSTRQATKRRLAEEVGA--TATVDPSAGDVVEAIAGPVGLVPGG 253
Query: 252 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTP--AAAREVDVIGIFRYR 309
           +DV  +C G  +T+  +    + GG V ++G+      V + P     RE+ V+G F   
Sbjct: 254 VDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSFINP 313
Query: 310 STWPLCIEFLRSGKIDVKPLITHRFGFTQ 338
                  + + +G I++   I+ R    +
Sbjct: 314 FVHRRAADLVATGAIEIDRXISRRISLDE 342

>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase (rspb) From E. Coli Cft073 (efi Target Efi-506413) Complexed With Cofactor Nadh Length = 359

Iteration: 1
 Score =  147 bits (370), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 152/323 (47%), Gaps = 13/323 (4%)
Query: 26  LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEV 85
           L I    +PT    +V+V++K  GICGSD H +   R  N   K P VIGHE  G+I+ V
Sbjct: 32  LSIIEREIPTPSAGEVRVKVKLAGICGSDSHIY---RGHNPFAKYPRVIGHEFFGVIDAV 88
Query: 86  GSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKL 145
           G  V+S  VG+RVA++P +SCGHC  C  G  N+C  +   G    +G  +   V PAK 
Sbjct: 89  GEGVESARVGERVAVDPVVSCGHCYPCSIGKPNVCTTLAVLGV-HADGGFSEYAVVPAKN 147
Query: 146 CYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARA-FGAP 204
            +K+P+ V+ +   M EP ++  +            V++ G+GPIGL  +   +  +   
Sbjct: 148 AWKIPEAVADQYAVMIEPFTIAANVTGHGQPTENDTVLVYGAGPIGLTIVQVLKGVYNVK 207
Query: 205 RIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKT 264
            +I+ D   +RL  A+  GAD        I +  T +G+     G    +  D       
Sbjct: 208 NVIVADRIDERLEKAKESGADWA------INNSQTPLGESFAEKGIKPTLIIDAACHPSI 261
Query: 265 MSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKI 324
           +  A+    P  ++ L+G +     V       +E+ +       + +P+ I++L  G I
Sbjct: 262 LKEAVTLASPAARIVLMGFSSEPSEVIQQGITGKELSIFSSRLNANKFPVVIDWLSKGLI 321
Query: 325 DVKPLITHRFGFTQKEIEDAFEI 347
             + LITH F F  + + DA  +
Sbjct: 322 KPEKLITHTFDF--QHVADAISL 342

>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase From Escherichia Coli Length = 346

Iteration: 1
 Score =  135 bits (341), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/317 (30%), Positives = 157/317 (49%), Gaps = 25/317 (7%)
Query: 33  LPTLGPQD-VKVRIKALGICGSDVHH-FKTMRCANFIVKKPMVIGHECAGIIEEVGSEVK 90
           +P +  QD V+V+I + G+CGSD+   FK     N     P+ +GHE +G I+ VGS V 
Sbjct: 19  IPEIKHQDEVRVKIASSGLCGSDLPRIFK-----NGAHYYPITLGHEFSGYIDAVGSGVD 73
Query: 91  SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLP 150
            L  GD VA  P + C  C  C  G Y+ C +  F GS   +G  A  +V   K  + LP
Sbjct: 74  DLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSR-RDGGFAEYIVVKRKNVFALP 132
Query: 151 DNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITD 210
            ++ +E+GA  EP++VG+HA   A      NV+I+G+G IGL+ +  A A GA  +   D
Sbjct: 133 TDMPIEDGAFIEPITVGLHAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAID 192
Query: 211 VDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS--GIDVSFDCVGFDKTMSTA 268
           +  ++L++A++ GA +T   S      +    ++Q+ +       +  +  G  +T+  A
Sbjct: 193 ISSEKLALAKSFGAMQTFNSS------EMSAPQMQSVLRELRFNQLILETAGVPQTVELA 246
Query: 269 LNATRPGGKVCLIGLAKTEM---TVALTPAAAREVDVIGIF-RYRSTWP-----LCIEFL 319
           +    P  ++ L+G    ++   +        +E+ VIG +  Y S WP          L
Sbjct: 247 VEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLL 306
Query: 320 RSGKIDVKPLITHRFGF 336
              K+ ++PLI HR  F
Sbjct: 307 TERKLSLEPLIAHRGSF 323

>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339

Iteration: 1
 Score =  123 bits (308), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 146/315 (46%), Gaps = 25/315 (7%)
Query: 26  LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKK--PMVIGHECAGIIE 83
           LKI+    PT+   +V VRIKA G+C +D+H        ++ VK   P++ GHE  GI+E
Sbjct: 13  LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAH----GDWPVKPKLPLIPGHEGVGIVE 68
Query: 84  EVGSEVKSLEVGDRVALEPGI--SCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVH 141
           EVG  V  L+VGDRV + P +  +CGHC  C +G   LC   +  G    +G  A     
Sbjct: 69  EVGPGVTHLKVGDRVGI-PWLYSACGHCDYCLSGQETLCEHQKNAGY-SVDGGYAEYCRA 126
Query: 142 PAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAAR 199
            A    K+PDN+S EE A   C  ++    A +     P   V I G G +G V +  A+
Sbjct: 127 AADYVVKIPDNLSFEEAAPIFCAGVTT-YKALKVTGAKPGEWVAIYGIGGLGHVAVQYAK 185
Query: 200 AFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV 259
           A G   ++  D+  ++L +A+ LGAD        +  +  D  K       G+  +    
Sbjct: 186 AMGL-NVVAVDIGDEKLELAKELGADLV------VNPLKEDAAKFMKEKVGGVHAAVVTA 238
Query: 260 GFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG-IFRYRSTWPLCIEF 318
                  +A N+ R GG   L+GL   EM + +       + +IG I   R      ++F
Sbjct: 239 VSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQF 298
Query: 319 LRSGK----IDVKPL 329
              GK    I+V+PL
Sbjct: 299 AAEGKVKTIIEVQPL 313

>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339

Iteration: 1
 Score =  122 bits (306), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 145/315 (46%), Gaps = 25/315 (7%)
Query: 26  LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKK--PMVIGHECAGIIE 83
           LKI+    PT+   +V VRIKA G+C +D+H        ++ VK   P++ GHE  GI+E
Sbjct: 13  LKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAH----GDWPVKPKLPLIPGHEGVGIVE 68
Query: 84  EVGSEVKSLEVGDRVALEPGI--SCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVH 141
           EVG  V  L+VGDRV + P +  +CGHC  C +G   LC   +  G    +G  A     
Sbjct: 69  EVGPGVTHLKVGDRVGI-PWLYSACGHCDYCLSGQETLCEHQKNAGY-SVDGGYAEYCRA 126
Query: 142 PAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAAR 199
            A    K+PDN+S EE A   C  ++    A +     P   V I G G  G V +  A+
Sbjct: 127 AADYVVKIPDNLSFEEAAPIFCAGVTT-YKALKVTGAKPGEWVAIYGIGGFGHVAVQYAK 185
Query: 200 AFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV 259
           A G   ++  D+  ++L +A+ LGAD        +  +  D  K       G+  +    
Sbjct: 186 AMGL-NVVAVDIGDEKLELAKELGADLV------VNPLKEDAAKFMKEKVGGVHAAVVTA 238
Query: 260 GFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG-IFRYRSTWPLCIEF 318
                  +A N+ R GG   L+GL   EM + +       + +IG I   R      ++F
Sbjct: 239 VSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQF 298
Query: 319 LRSGK----IDVKPL 329
              GK    I+V+PL
Sbjct: 299 AAEGKVKTIIEVQPL 313

>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus Tokodaii Strain7 Length = 347

Iteration: 1
 Score =  115 bits (287), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 95/316 (30%), Positives = 150/316 (47%), Gaps = 15/316 (4%)
Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVH----HFKTMRCANFI-VKKPMVIGHEC 78
           K LK++   +P      V ++I+A G+C SDVH     F  +R    + VK P+ +GHE 
Sbjct: 11  KPLKLEDIPIPKPKGSQVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEI 70
Query: 79  AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHK 138
           AG IEEVG EV     GD VA+ P    G+C  C+ G  +LC   R+ G    +G+ A  
Sbjct: 71  AGRIEEVGDEVVGYSKGDLVAVNPWEGEGNCYYCRIGEEHLCDSPRWLGI-NYDGAYAEY 129
Query: 139 VVHP-AKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGS-GPIGLVTLL 196
           V+ P  K  YKL    ++E   +         A R+A++ P   ++++G+ G +G + + 
Sbjct: 130 VLVPHYKYLYKLRRLSAVEAAPLTCSGVTTYRAVRKASLDPSKTLVVIGAGGGLGTMAIQ 189
Query: 197 AARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF 256
            A+A     II  DV  + L  A+  GAD     S+  +D  +++ +I    G G D   
Sbjct: 190 IAKAVSGATIIGVDVREEALEAAKRAGADYVINASS--QDPVSEIRRITQ--GKGADAVI 245
Query: 257 DCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG-IFRYRSTWPLC 315
           D    +KT+S         GK  ++GL   ++          EV  IG +   +S +   
Sbjct: 246 DLNNSEKTLSIYPYVLAKQGKYVMVGLFGADLKYHAPLITLNEVQFIGSLVGNQSDFLGI 305
Query: 316 IEFLRSGKIDVKPLIT 331
           +    +GK  VKP++T
Sbjct: 306 MSLAEAGK--VKPMVT 319

>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Variant Re1 Length = 348

Iteration: 1
 Score =  112 bits (281), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 85/305 (27%), Positives = 152/305 (49%), Gaps = 14/305 (4%)
Query: 32  HLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS 91
            L  + P +  + ++  G+C +D+H    +   +F  K   V+GHE  GI++E+G++V S
Sbjct: 20  ELRAIKPNEALLDMEYCGVCHTDLH----VAAGDFGNKAGTVLGHEGIGIVKEIGADVSS 75
Query: 92  LEVGDRVALEPGIS-CGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLP 150
           L+VGDRV++      CGHC  C +G+   C E++  G    +G +A + +  A    K+P
Sbjct: 76  LQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGY-SVDGGMAEEAIVVADYAVKVP 134
Query: 151 DNVSLEEGAMCEPLSVGVH-ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIIT 209
           D +   E +      V  + A + + V P    +I G+G +G + +  A+     ++I  
Sbjct: 135 DGLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAV 194
Query: 210 DVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTAL 269
           D++  +L++A+ +GAD T   S D+  VD ++ KI    G G+  +  C         A+
Sbjct: 195 DINQDKLNLAKKIGADVTIN-SGDVNPVD-EIKKITG--GLGVQSAIVCAVARIAFEQAV 250
Query: 270 NATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG-IFRYRSTWPLCIEFLRSGKIDVKP 328
            + +P GK+  + +  TEMT+++       V+V G +   R       +F   GK  VKP
Sbjct: 251 ASLKPMGKMVAVAVPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAFQFGAEGK--VKP 308
Query: 329 LITHR 333
           ++  R
Sbjct: 309 IVATR 313

>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Length = 348

Iteration: 1
 Score =  110 bits (276), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 151/305 (49%), Gaps = 14/305 (4%)
Query: 32  HLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS 91
            L  + P +  + ++  G+C +D+H    +   ++  K   V+GHE  GI++E+G++V S
Sbjct: 20  ELRAIKPNEALLDMEYCGVCHTDLH----VAAGDYGNKAGTVLGHEGIGIVKEIGADVSS 75
Query: 92  LEVGDRVALEPGIS-CGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLP 150
           L+VGDRV++      CGHC  C +G+   C E++  G    +G +A + +  A    K+P
Sbjct: 76  LQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGY-SVDGGMAEEAIVVADYAVKVP 134
Query: 151 DNVSLEEGAMCEPLSVGVH-ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIIT 209
           D +   E +      V  + A + + V P    +I G+G +G + +  A+     ++I  
Sbjct: 135 DGLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAV 194
Query: 210 DVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTAL 269
           D++  +L++A+ +GAD     S D+  VD ++ KI    G G+  +  C         A+
Sbjct: 195 DINQDKLNLAKKIGADVIIN-SGDVNPVD-EIKKITG--GLGVQSAIVCAVARIAFEQAV 250
Query: 270 NATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG-IFRYRSTWPLCIEFLRSGKIDVKP 328
            + +P GK+  + L  TEMT+++       V+V G +   R       +F   GK  VKP
Sbjct: 251 ASLKPMGKMVAVALPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAFQFGAEGK--VKP 308
Query: 329 LITHR 333
           ++  R
Sbjct: 309 IVATR 313

>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm 44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol Length = 345

Iteration: 1
 Score =  108 bits (270), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 90/323 (27%), Positives = 142/323 (43%), Gaps = 23/323 (7%)
Query: 34  PTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 93
           PT GP ++ +++ A G+C SD+     M  A +    P+ +GHE  G + E+G  V    
Sbjct: 21  PTPGPGEILLKVTAAGLCHSDIF-VMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFG 79
Query: 94  VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFG-SPP---TNGSLA-HKVVHPAKLCYK 148
           VGD VA+     CG C  C  G  N C      G +PP   + GS+A + +V  A+    
Sbjct: 80  VGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVP 139
Query: 149 LPDNVSLEEGAMCEPLSVGVHACRRA--NVGPETNVMIMGSGPIGLVTLLAARAFGAPRI 206
           + D   +    + +      HA  R    +GP +  +++G G +G V +   RA  A R+
Sbjct: 140 IGDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARV 199
Query: 207 IITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMS 266
           I  D+D  RL++AR +GAD   K      D   ++       G G    FD VG   T+ 
Sbjct: 200 IAVDLDDDRLALAREVGADAAVKSGAGAADAIREL-----TGGQGATAVFDFVGAQSTID 254
Query: 267 TALNATRPGGKVCLIGL---AKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGK 323
           TA       G + ++G+   A  ++   + P  A  V     +  RS     +   R+G+
Sbjct: 255 TAQQVVAVDGHISVVGIHAGAHAKVGFFMIPFGASVVTP--YWGTRSELMEVVALARAGR 312
Query: 324 IDVKPLITHRFGFTQKEIEDAFE 346
           +D+     H   FT  E   A+ 
Sbjct: 313 LDI-----HTETFTLDEGPAAYR 330

>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase Length = 343

Iteration: 1
 Score =  108 bits (270), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 92/314 (29%), Positives = 149/314 (47%), Gaps = 16/314 (5%)
Query: 22  GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGI 81
           G + L++    +P  GP++V+VR+KA  +   DV   K +      +  P V+G + +G+
Sbjct: 11  GPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPL--PHVLGADGSGV 68
Query: 82  IEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVH 141
           ++ VG  V+    GD V + PG+SCG C  C AG  NLCP  +  G    +G+ A  VV 
Sbjct: 69  VDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGE-HRHGTYAEYVVL 127
Query: 142 PAKLCYKLPDNVSLEEGAMCEP--LSVGVHACRRANVGPETNVMIMGSGP-IGLVTLLAA 198
           P       P N+S EE A      L+       +  V P  +V++M +G  + +  +  A
Sbjct: 128 PEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIA 187
Query: 199 RAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC 258
           + FGA R+I T     +L  A+ LGADET  V+    D   +V ++    G G D   D 
Sbjct: 188 KLFGA-RVIATAGSEDKLRRAKALGADET--VNYTHPDWPKEVRRLTG--GKGADKVVDH 242
Query: 259 VGFDKTMSTALNATRPGGKVCLIGLAK-TEMTVALTPAAAREVDVIG-IFRYRSTWPLCI 316
            G        + AT  GG++ + G +   E T+       R++ ++G     +S     +
Sbjct: 243 TG-ALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMASKSRLFPIL 301
Query: 317 EFLRSGKIDVKPLI 330
            F+  GK+  KP++
Sbjct: 302 RFVEEGKL--KPVV 313

>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score =  105 bits (261), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 99/380 (26%), Positives = 168/380 (44%), Gaps = 60/380 (15%)
Query: 12  KNQNMAAWLLG----IKTLKIQPYHLPTLGPQDVKVRIKALG--ICGSDVHHFKTMRCAN 65
           K +   AW  G    I+ +++ P       P+  +VRI+ +   +C +D++     + A 
Sbjct: 8   KCKAAIAWKTGSPLCIEEIEVSP-------PKACEVRIQVIATCVCPTDINATDPKKKAL 60
Query: 66  FIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRF 125
           F    P+V+GHECAGI+E VG  V + + GD+V       C  C LC +   NLC ++R 
Sbjct: 61  F----PVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRN 116
Query: 126 FGSPPTNGSL-------------------------AHKVVHPAKLCYKLPDNVSLEEGAM 160
           F  P  +  L                          + VV  A L  ++ D  +LE   +
Sbjct: 117 FKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANL-ARVDDEANLERVCL 175
Query: 161 --CEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSI 218
             C   S    A   A V P +   + G G +GL  ++  +  GA RII  D++ ++   
Sbjct: 176 IGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPK 235
Query: 219 ARNLGADETA---KVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG 275
           A+ LGA +     ++   ++DV T++         G+D S DC G  +T+  A++ T  G
Sbjct: 236 AKALGATDCLNPRELDKPVQDVITEL------TAGGVDYSLDCAGTAQTLKAAVDCTVLG 289
Query: 276 GKVC-LIGLAKTEMTVALTPA-AAREVD--VIGIFRYRSTWPLCIEFLRSGKIDVKPLIT 331
              C ++G    EMT+        R ++    G ++   + P  +   ++ K D+  L+T
Sbjct: 290 WGSCTVVGAKVDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVT 349
Query: 332 HRFGFTQKEIEDAFEISAQG 351
           H   F  + I DA ++  +G
Sbjct: 350 HALPF--ESINDAIDLMKEG 367

>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score =  105 bits (261), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 99/380 (26%), Positives = 168/380 (44%), Gaps = 60/380 (15%)
Query: 12  KNQNMAAWLLG----IKTLKIQPYHLPTLGPQDVKVRIKALG--ICGSDVHHFKTMRCAN 65
           K +   AW  G    I+ +++ P       P+  +VRI+ +   +C +D++     + A 
Sbjct: 8   KCKAAIAWKTGSPLCIEEIEVSP-------PKACEVRIQVIATCVCHTDINATDPKKKAL 60
Query: 66  FIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRF 125
           F    P+V+GHECAGI+E VG  V + + GD+V       C  C LC +   NLC ++R 
Sbjct: 61  F----PVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRN 116
Query: 126 FGSPPTNGSL-------------------------AHKVVHPAKLCYKLPDNVSLEEGAM 160
           F  P  +  L                          + VV  A L  ++ D  +LE   +
Sbjct: 117 FKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANL-ARVDDEANLERVCL 175
Query: 161 --CEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSI 218
             C   S    A   A V P +   + G G +GL  ++  +  GA RII  D++ ++   
Sbjct: 176 IGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPK 235
Query: 219 ARNLGADETA---KVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG 275
           A+ LGA +     ++   ++DV T++         G+D S DC G  +T+  A++ T  G
Sbjct: 236 AKALGATDCLNPRELDKPVQDVITEL------TAGGVDYSLDCAGTAQTLKAAVDCTVLG 289
Query: 276 GKVC-LIGLAKTEMTVALTPA-AAREVD--VIGIFRYRSTWPLCIEFLRSGKIDVKPLIT 331
              C ++G    EMT+        R ++    G ++   + P  +   ++ K D+  L+T
Sbjct: 290 WGSCTVVGAKVDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVT 349
Query: 332 HRFGFTQKEIEDAFEISAQG 351
           H   F  + I DA ++  +G
Sbjct: 350 HALPF--ESINDAIDLMKEG 367

>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From Arabidopsis Thaliana, Complex With Nadh Length = 378

Iteration: 1
 Score =  104 bits (259), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 147/349 (42%), Gaps = 47/349 (13%)
Query: 38  PQDVKVRIKAL--GICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVG 95
           PQ  +VRIK L   +C +D + +            P ++GHE AGI+E VG  V  ++ G
Sbjct: 31  PQAGEVRIKILYTALCHTDAYTWSGKDPEGLF---PCILGHEAAGIVESVGEGVTEVQAG 87
Query: 96  DRVALEPGISCGHCSLCKAGSYNLCPEMR-----------------FFGSP-----PTNG 133
           D V       C  C  CK+G  NLC ++R                   G P      T+ 
Sbjct: 88  DHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTST 147
Query: 134 SLAHKVVHPAKLCYKLP----DNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGP 189
              + VVH   +    P    D V L    +  P  +G      A V P +NV I G G 
Sbjct: 148 FSQYTVVHDVSVAKIDPTAPLDKVCLLGCGV--PTGLGA-VWNTAKVEPGSNVAIFGLGT 204
Query: 190 IGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK-IQNAM 248
           +GL     A+  GA RII  D+D ++   A+  G +E      + +D D  + + I +  
Sbjct: 205 VGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEF----VNPKDHDKPIQEVIVDLT 260
Query: 249 GSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTP-----AAAREVDV 302
             G+D SF+C+G    M  AL     G G   ++G+A +   ++  P         +   
Sbjct: 261 DGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTA 320
Query: 303 IGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG 351
            G F+ R+  P  +E   + +I V   ITH    T  EI  AF++  +G
Sbjct: 321 FGGFKSRTQVPWLVEKYMNKEIKVDEYITHN--LTLGEINKAFDLLHEG 367

>pdb|3IP1|A Chain A, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From Thermotoga Maritima Length = 404

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 104/207 (50%), Gaps = 20/207 (9%)
Query: 38  PQDVKVRIKALGICGSDVHHFKTMRCANFIVKK----PMVIGHECAGIIEEVGSEV---- 89
           P ++ +++KA GICGSDVH  +T      +       P+ +GHE +G++ E G E     
Sbjct: 55  PTEIIIKVKACGICGSDVHXAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRR 114
Query: 90  --KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCY 147
             K  E+G+ V  E  + CGHC  C  G  N C  +   G    +G+ A  V   AK  +
Sbjct: 115 TNKRFEIGEPVCAEEXLWCGHCRPCAEGFPNHCENLNELGFN-VDGAFAEYVKVDAKYAW 173
Query: 148 KLPDNVSLEEG-------AMCEPLSVGVHAC--RRANVGPETNVMIMGSGPIGLVTLLAA 198
            L +   + EG       ++ EP SV  +A   R   + P  NV+I+G GPIGL  +   
Sbjct: 174 SLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAIL 233
Query: 199 RAFGAPRIIITDVDVQRLSIARNLGAD 225
           +  GA ++I+++    R ++A+ LGAD
Sbjct: 234 KHAGASKVILSEPSEVRRNLAKELGAD 260

>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus Complexed With Nad(H) And 2-Ethoxyethanol Length = 347

Iteration: 1
 Score =  102 bits (253), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 153/317 (48%), Gaps = 17/317 (5%)
Query: 24  KTLKIQPYHLPT-LGPQDVKVRIKALGICGSDVH----HFKTMRCANFI-VKKPMVIGHE 77
           K L +Q   +P   GPQ V ++++A G+C SDVH     F  +R    + VK P+ +GHE
Sbjct: 11  KPLSLQEIGVPKPKGPQ-VLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHE 69
Query: 78  CAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAH 137
            AG IEEVG EV     GD VA+ P    G+C  C+ G  +LC   R+ G    +G+ A 
Sbjct: 70  IAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAE 128
Query: 138 KVVHP-AKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGP-ETNVMIMGSGPIGLVTL 195
            V+ P  K  YKL    ++E   +         A R+A++ P +T +++   G +G + +
Sbjct: 129 YVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAV 188
Query: 196 LAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 255
             A+A     II  DV  + +  A+  GAD    ++  ++D   ++ +I  +   G+D  
Sbjct: 189 QIAKAVSGATIIGVDVREEAVEAAKRAGADYV--INASMQDPLAEIRRITES--KGVDAV 244
Query: 256 FDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG-IFRYRSTWPL 314
            D    +KT+S    A    GK  ++GL   ++          E+  +G +   +S +  
Sbjct: 245 IDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLG 304
Query: 315 CIEFLRSGKIDVKPLIT 331
            +    +GK  VKP+IT
Sbjct: 305 IMRLAEAGK--VKPMIT 319

>pdb|1H2B|A Chain A, Crystal Structure Of The Alcohol Dehydrogenase From The Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a Resolution Length = 359

Iteration: 1
 Score =  101 bits (252), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 80/267 (29%), Positives = 122/267 (45%), Gaps = 15/267 (5%)
Query: 24  KTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGII 82
           K L+I+    P L G  DV VRI   G+C +D+H  + M       K P  +GHE  G I
Sbjct: 26  KPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYI 85
Query: 83  EEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHP 142
           EEV   V+ LE GD V L P ++ G C  C+AG    C  + F G    +G  A  +   
Sbjct: 86  EEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGL-NIDGGFAEFMRTS 144
Query: 143 AKLCYKLPDNVSLEEGAMCEPLS-VGVHACRRAN-----VGPETNVMIMGSGPIGLVTLL 196
            +   KLP ++S E+     PL+  G+ A R        + P   V I+G G +G + + 
Sbjct: 145 HRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQ 204
Query: 197 AARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTD-IEDVDTDVGKIQNAMGSGIDVS 255
             +      +I  DV  ++L +A  LGAD       D ++ V      ++   G G++V+
Sbjct: 205 LLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRDPVKQV------MELTRGRGVNVA 258
Query: 256 FDCVGFDKTMSTALNATRPGGKVCLIG 282
            D VG   T+          G++ ++G
Sbjct: 259 MDFVGSQATVDYTPYLLGRMGRLIIVG 285

>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus-Monoclinic Crystal Form Length = 347

Iteration: 1
 Score =  100 bits (250), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 153/317 (48%), Gaps = 17/317 (5%)
Query: 24  KTLKIQPYHLPT-LGPQDVKVRIKALGICGSDVH----HFKTMRCANFI-VKKPMVIGHE 77
           K L +Q   +P   GPQ V ++++A G+C SDVH     F  +R    + VK P+ +GHE
Sbjct: 11  KPLSLQEIGVPKPKGPQ-VLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHE 69
Query: 78  CAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAH 137
            AG IEEVG EV     GD VA+ P    G+C  C+ G  +LC   R+ G    +G+ A 
Sbjct: 70  IAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAE 128
Query: 138 KVVHP-AKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGP-ETNVMIMGSGPIGLVTL 195
            V+ P  K  YKL    ++E   +         A R+A++ P +T +++   G +G + +
Sbjct: 129 YVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAV 188
Query: 196 LAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 255
             A+A     II  DV  + +  A+  GAD    ++  ++D   ++ +I  +   G+D  
Sbjct: 189 QIAKAVSGATIIGVDVREEAVEAAKRAGADYV--INASMQDPLAEIRRITES--KGVDAV 244
Query: 256 FDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG-IFRYRSTWPL 314
            D    +KT+S    A    GK  ++GL   ++          E+  +G +   +S +  
Sbjct: 245 IDLNYSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLG 304
Query: 315 CIEFLRSGKIDVKPLIT 331
            +    +GK  VKP+IT
Sbjct: 305 IMRLAEAGK--VKPMIT 319

>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella Mel Length = 365

Iteration: 1
 Score =  100 bits (249), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 137/308 (44%), Gaps = 19/308 (6%)
Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKK--PMVIGHECAGI 81
           K L I    +P  GP  ++V I+A G+C +D+H  +     ++ VK   P + GHE  G 
Sbjct: 36  KPLTIDEVPIPQPGPGQIQVAIQASGVCHTDLHAAE----GDWPVKPNPPFIPGHEGVGF 91
Query: 82  IEEVGSEVKSLEVGDRVALEPGI--SCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKV 139
           +  VGS VK ++ GDRV + P +  +CGHC  C  G   LC E    G    NG  A  V
Sbjct: 92  VSAVGSGVKHVKEGDRVGI-PWLYTACGHCRHCLGGWETLCEEQLNTGY-SVNGGFAEYV 149
Query: 140 VHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLA 197
           V        LP N+   E A  +C  ++V     +  +  P   V+I G G +G + +  
Sbjct: 150 VADPNFVGHLPKNIDFNEIAPVLCAGVTV-YKGLKVTDTKPGDWVVISGIGGLGHMAVQY 208
Query: 198 ARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 257
           ARA G   +   D+D ++L +AR LGA  T    T + D    + K  +    G+ V+  
Sbjct: 209 ARAMGL-NVAAVDIDDRKLDLARRLGATVTVNAKT-VADPAAYIRKETDGGAQGVLVTAV 266
Query: 258 CVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG-IFRYRSTWPLCI 316
                K    AL     GG V L GL   +  +++       V V G I   R      +
Sbjct: 267 S---PKAFEQALGMVARGGTVSLNGLPPGDFPLSIFNMVLNGVTVRGSIVGTRLDLQESL 323
Query: 317 EFLRSGKI 324
           +F   GK+
Sbjct: 324 DFAADGKV 331

>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh) Double Mutant (W95l,N249y) Length = 347

Iteration: 1
 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 153/317 (48%), Gaps = 17/317 (5%)
Query: 24  KTLKIQPYHLPT-LGPQDVKVRIKALGICGSDVH----HFKTMRCANFI-VKKPMVIGHE 77
           K L +Q   +P   GPQ V ++++A G+C SDVH     F  +R    + VK P+ +GHE
Sbjct: 11  KPLSLQEIGVPKPKGPQ-VLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHE 69
Query: 78  CAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAH 137
            AG IEEVG EV     GD VA+ P    G+C  C+ G  +LC   R+ G    +G+ A 
Sbjct: 70  IAGKIEEVGDEVVGYSKGDLVAVNPLQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAE 128
Query: 138 KVVHP-AKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGP-ETNVMIMGSGPIGLVTL 195
            V+ P  K  YKL    ++E   +         A R+A++ P +T +++   G +G + +
Sbjct: 129 YVIVPHYKYMYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAV 188
Query: 196 LAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 255
             A+A     II  DV  + +  A+  GAD    ++  ++D   ++ +I  +   G+D  
Sbjct: 189 QIAKAVSGATIIGVDVREEAVEAAKRAGADYV--INASMQDPLAEIRRITES--KGVDAV 244
Query: 256 FDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG-IFRYRSTWPL 314
            D    +KT+S    A    GK  ++GL   ++          E+  +G +   +S +  
Sbjct: 245 IDLNYSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLG 304
Query: 315 CIEFLRSGKIDVKPLIT 331
            +    +GK  VKP+IT
Sbjct: 305 IMRLAEAGK--VKPMIT 319

>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From Tomato (solanum Lycopersicum) In Complex With Nad+ Length = 396

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 151/357 (42%), Gaps = 44/357 (12%)
Query: 38  PQDVKVRIKAL--GICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVG 95
           PQ  +VR+K L   +C +D + +            P V+GHE AGI+E VG  V  ++ G
Sbjct: 49  PQAGEVRVKVLYTALCHTDAYTWSGKDPEGLF---PCVLGHEAAGIVESVGEGVTEVQPG 105
Query: 96  DRVALEPGISCGHCSLCKAGSYNLCPEMR-----------------FFGSP-----PTNG 133
           D V       C  C  CK+G  NLC ++R                   G P      T+ 
Sbjct: 106 DHVIPCYQAECRECKFCKSGKTNLCGKVRAATGVGVMMNDRKSRFSINGKPIYHFMGTST 165
Query: 134 SLAHKVVHPAKLCYKLPDNVSLEEGAMCE---PLSVGVHACRRANVGPETNVMIMGSGPI 190
              + VVH   +  K+     LE+  +     P  +G      A V P + V + G G +
Sbjct: 166 FSQYTVVHDVSVA-KIDPVAPLEKVCLLGCGVPTGLGA-VWNTAKVEPGSIVAVFGLGTV 223
Query: 191 GLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS 250
           GL     A+A GA RII  D+D ++   A+N G  E        + +   +  + +    
Sbjct: 224 GLAVAEGAKAAGASRIIGIDIDSKKFDRAKNFGVTEFINPKEHEQPIQQVIVDLTDG--- 280
Query: 251 GIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTP-----AAAREVDVIG 304
           G+D SF+C+G    M +AL     G G   ++G+A +   ++  P         +    G
Sbjct: 281 GVDYSFECIGNVSVMRSALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFG 340
Query: 305 IFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361
            F+ RS  P  ++     +I V   ITH    T  +I  AF++    G+ ++V+ ++
Sbjct: 341 GFKSRSQVPSLVDKYLKKEIKVDEYITHN--MTLADINKAFDL-MHDGDCLRVVLDM 394

>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score = 99.0 bits (245), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 91/356 (25%), Positives = 155/356 (43%), Gaps = 44/356 (12%)
Query: 38  PQDVKVRIK--ALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVG 95
           P+  +VRIK  A+GICG+D H    +   N +   P+++GHE AGI+E VG  V +++ G
Sbjct: 31  PKAYEVRIKMVAVGICGTDDH----VVSGNLVTPLPVILGHEAAGIVESVGEGVTTVKPG 86
Query: 96  DRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP-----------PTNGSLAHKVVHPAK 144
           D+V       CG C +CK    N C +    G+P              G   H  +  + 
Sbjct: 87  DKVIPLFTPQCGKCRVCKNPESNYCLKND-LGNPRGTLQDGTRRFTCRGKPIHHFLGTST 145
Query: 145 LC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANVGPETNVMIMGSGPIGL 192
              Y + D  ++ +     PL          S G   A   A V P +   + G G +GL
Sbjct: 146 FSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGL 205
Query: 193 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM-GSG 251
             ++  +A GA RII  D++  + + A+ LGA E      + +D    + ++   M   G
Sbjct: 206 SAVMGCKAAGAARIIAVDINKDKFAKAKELGATE----CINPQDYKKPIQEVLKEMTDGG 261
Query: 252 IDVSFDCVG-FDKTMSTALNATRPGGKVCLIGLAKTEMTVALTP-----AAAREVDVIGI 305
           +D SF+ +G  D  M++ L      G   ++G+      +++ P         +  V G 
Sbjct: 262 VDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLTGRTWKGAVYGG 321
Query: 306 FRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361
           F+ +   P  +    + K  +  LITH   F  ++I + F++    G +I+ +   
Sbjct: 322 FKSKEGIPKLVADFMAKKFSLDALITHVLPF--EKINEGFDL-LHSGKSIRTVLTF 374

>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From Thermotoga Maritima At 2.00 A Resolution Length = 380

Iteration: 1
 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 152/345 (44%), Gaps = 39/345 (11%)
Query: 41  VKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL-----EVG 95
           + V I + G+CGSDVH F   R  +  V  P+++GHE AG + EV  E + L     + G
Sbjct: 45  ILVEILSAGVCGSDVHMF---RGEDPRVPLPIILGHEGAGRVVEVNGEKRDLNGELLKPG 101
Query: 96  DRVALEPGISCGHCSLCKAGSY-NLCPEMRFFG-------SPPTNGSLA-HKVVHPAKLC 146
           D +    GI+CG C  CK      LCP  + +G        P   G  + H V+ P    
Sbjct: 102 DLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDV 161
Query: 147 YKLPDNVSLEEGAMCEPLSVGVHACRRANVGPET----NVMIMGSGPIGLVTLLAARAFG 202
            K+ +   L+  AM   +  G  A    +  PE+     V+I G+GP+GL  ++ AR+ G
Sbjct: 162 LKVSEKDDLDVLAMA--MCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLG 219
Query: 203 APRIIITDVDVQRLSIARNLGADETA-KVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGF 261
           A  +I+      RL +A  +GAD T  +  T +E+    +  I +  G G D   +  G 
Sbjct: 220 AENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDITH--GRGADFILEATGD 277
Query: 262 DKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTW-PLCIEFLR 320
            + +       R GG   + G+A  +  V   P    E  V+    ++  W      F++
Sbjct: 278 SRALLEGSELLRRGGFYSVAGVAVPQDPV---PFKVYEWLVLKNATFKGIWVSDTSHFVK 334
Query: 321 SGKID------VKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 359
           +  I       +  LITHR     KE   A E+  +   A+KV+ 
Sbjct: 335 TVSITSRNYQLLSKLITHRLPL--KEANKALEL-MESREALKVIL 376

>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx Length = 340

Iteration: 1
 Score = 98.2 bits (243), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 94/313 (30%), Positives = 142/313 (45%), Gaps = 23/313 (7%)
Query: 26  LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKK--PMVIGHECAGIIE 83
           L I    +P  GP  V+V+I+A G+C +D+H        ++ VK   P + GHE  G + 
Sbjct: 15  LTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAAD----GDWPVKPTLPFIPGHEGVGYVS 70
Query: 84  EVGSEVKSLEVGDRVALEPGI--SCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVH 141
            VGS V  ++ GDRV + P +  +CG+C  C  G   LC + +  G    NG     VV 
Sbjct: 71  AVGSGVSRVKEGDRVGV-PWLYSACGYCEHCLQGWETLCEKQQNTGY-SVNGGYGEYVVA 128
Query: 142 PAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAAR 199
                  LPD V   E A  +C  ++V     +  +  P   V+I G G +G V +  AR
Sbjct: 129 DPNYVGLLPDKVGFVEIAPILCAGVTV-YKGLKVTDTRPGQWVVISGIGGLGHVAVQYAR 187
Query: 200 AFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV 259
           A G  R+   D+D  +L++AR LGA+    V+ +  D D     +Q  +G    V    V
Sbjct: 188 AMGL-RVAAVDIDDAKLNLARRLGAE----VAVNARDTDP-AAWLQKEIGGAHGVLVTAV 241
Query: 260 GFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG-IFRYRSTWPLCIEF 318
              K  S A+   R GG + L GL   +    +     + + + G I   RS     ++F
Sbjct: 242 S-PKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRGSIVGTRSDLQESLDF 300
Query: 319 LRSGKIDVKPLIT 331
              G  DVK  ++
Sbjct: 301 AAHG--DVKATVS 311

>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol Dehydrogenase With Its Coenzyme And Weak Substrate Length = 342

Iteration: 1
 Score = 98.2 bits (243), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 124/266 (46%), Gaps = 24/266 (9%)
Query: 26  LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPM--VIGHECAGIIE 83
           L+I+   +P  GP  V V+I+A G+C +D+H  +     ++ VK P+  + GHE  G + 
Sbjct: 19  LRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAE----GDWPVKPPLPFIPGHEGVGYVA 74
Query: 84  EVGSEVKSLEVGDRVALEPGI--SCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVH 141
            VGS V  ++ GDRV + P +  +CG C  C  G   LC   +  G    NG  A  V+ 
Sbjct: 75  AVGSGVTRVKEGDRVGI-PWLYTACGCCEHCLTGWETLCESQQNTGY-SVNGGYAEYVLA 132
Query: 142 PAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAAR 199
                  LP NV   E A  +C  ++V     ++ N  P   V I G G +G V +  AR
Sbjct: 133 DPNYVGILPKNVEFAEIAPILCAGVTV-YKGLKQTNARPGQWVAISGIGGLGHVAVQYAR 191
Query: 200 AFGAPRIIITDVDVQRLSIARNLGADET--AKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 257
           A G   +   D+D  +L +AR LGA  T  A+    +E +  D+G     + + +     
Sbjct: 192 AMGL-HVAAIDIDDAKLELARKLGASLTVNARQEDPVEAIQRDIGGAHGVLVTAVS---- 246
Query: 258 CVGFDKTMSTALNATRPGGKVCLIGL 283
               +     A+   R GG + L+GL
Sbjct: 247 ----NSAFGQAIGMARRGGTIALVGL 268

>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense Length = 374

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 90/373 (24%), Positives = 162/373 (43%), Gaps = 43/373 (11%)
Query: 19  WLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHEC 78
           W L  K   I+   +      +V++++ A GIC SD H    +   N +   P+++GHE 
Sbjct: 15  WELK-KPFSIEEVEVAPPKAHEVRIKMVAAGICRSDEH----VVSGNLVTPLPVILGHEA 69
Query: 79  AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP--------- 129
           AGI+E VG  V +++ GD+V       CG C +CK    N C +    G+P         
Sbjct: 70  AGIVESVGEGVTTVKPGDKVIPLFTPQCGKCRICKNPESNYCLKND-LGNPRGTLQDGTR 128
Query: 130 --PTNGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRAN 175
               +G   H  V  +    Y + D  ++ +     PL          S G   A + A 
Sbjct: 129 RFTCSGKPIHHFVGVSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAK 188
Query: 176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIE 235
           V P +   + G G +GL  ++  +A GA RII  D++  + + A+ LGA E      + +
Sbjct: 189 VTPGSTCAVFGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATE----CINPQ 244
Query: 236 DVDTDVGKIQNAM-GSGIDVSFDCVG-FDKTMSTALNATRPGGKVCLIGLAKTEMTVALT 293
           D    + ++   M   G+D SF+ +G  D  M++ L      G   ++G+      +++ 
Sbjct: 245 DYKKPIQEVLKEMTDGGVDFSFEVIGQLDTMMASLLCCHEACGTSVIVGVPPDSQNLSIN 304
Query: 294 P-----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEIS 348
           P         +  + G F+ + + P  +    + K  +  LIT+   F  ++I + F++ 
Sbjct: 305 PMLLLTGRTWKGAIFGGFKSKESVPKLVADFMAKKFSLDALITNVLPF--EKINEGFDL- 361
Query: 349 AQGGNAIKVMFNL 361
            + G +I+ +   
Sbjct: 362 LRSGKSIRTVLTF 374

>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus Length = 347

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 96/317 (30%), Positives = 149/317 (47%), Gaps = 17/317 (5%)
Query: 24  KTLKIQPYHLPT-LGPQDVKVRIKALGICGSDVH----HFKTMRCANFI-VKKPMVIGHE 77
           K L +Q   +P   GPQ V ++++A G+C SDVH     F  +R    + VK P+ +GHE
Sbjct: 11  KPLSLQEIGVPKPKGPQ-VLIKVEAAGVCHSDVHXRQGRFGNLRIVEDLGVKLPVTLGHE 69
Query: 78  CAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAH 137
            AG IEEVG EV     GD VA+ P    G+C  C+ G  +LC   R+ G    +G+ A 
Sbjct: 70  IAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAE 128
Query: 138 KVVHP-AKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGP-ETNVMIMGSGPIGLVTL 195
            V+ P  K  YKL    ++E   +         A R+A++ P +T +++   G +G   +
Sbjct: 129 YVIVPHYKYXYKLRRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTXAV 188
Query: 196 LAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 255
             A+A     II  DV  + +  A+  GAD    ++  ++D   ++ +I  +   G+D  
Sbjct: 189 QIAKAVSGATIIGVDVREEAVEAAKRAGADYV--INASMQDPLAEIRRITES--KGVDAV 244
Query: 256 FDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLC 315
            D    +KT+S    A    GK   +GL   ++          E+  +G      +  L 
Sbjct: 245 IDLNNSEKTLSVYPKALAKQGKYVXVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLG 304
Query: 316 IEFL-RSGKIDVKPLIT 331
           I  L  +GK  VKP IT
Sbjct: 305 IXRLAEAGK--VKPXIT 319

>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/368 (23%), Positives = 160/368 (43%), Gaps = 43/368 (11%)
Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
           K   I+   +      +V++++ A GIC SD H    +     +   P++ GHE AGI+E
Sbjct: 19  KPFSIEEVEVAPPKAHEVRIKMVAAGICRSDDH----VVSGTLVAPLPVIAGHEAAGIVE 74
Query: 84  EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP-----------PTN 132
            +G  V ++  GD+V       CG CS+CK    NLC  ++    P              
Sbjct: 75  SIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLC--LKNLSMPRGTMQDGTSRFTCR 132
Query: 133 GSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANVGPET 180
           G   H  +  +    Y + D +S+ +     PL          S G   A + A V   +
Sbjct: 133 GKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAKVTQGS 192
Query: 181 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTD 240
              + G G +GL  ++  +A GA RII  D++  + + A+ +GA E      + +D    
Sbjct: 193 TCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATEC----VNPQDYKKP 248
Query: 241 VGKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTP---- 294
           + ++   M + G+D SF+ +G   TM  AL+  +   G   ++G+      +++ P    
Sbjct: 249 IQEVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLL 308
Query: 295 -AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGN 353
                +  + G F+ + + P  +    + K  + PLITH   F  ++I + F++  + G 
Sbjct: 309 SGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-LRSGK 365
Query: 354 AIKVMFNL 361
           +I+ +   
Sbjct: 366 SIRTILTF 373

>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/368 (23%), Positives = 160/368 (43%), Gaps = 43/368 (11%)
Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
           K   I+   +      +V++++ A GIC SD H    +     +   P++ GHE AGI+E
Sbjct: 19  KPFSIEEVEVAPPKAHEVRIKMVAAGICRSDDH----VVSGTLVAPLPVIAGHEAAGIVE 74
Query: 84  EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP-----------PTN 132
            +G  V ++  GD+V       CG CS+CK    NLC  ++    P              
Sbjct: 75  SIGEGVTTVRPGDKVIPLFIPQCGKCSVCKHPEGNLC--LKNLSMPRGTMQDGTSRFTCR 132
Query: 133 GSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANVGPET 180
           G   H  +  +    Y + D +S+ +     PL          S G   A + A V   +
Sbjct: 133 GKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAKVTQGS 192
Query: 181 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTD 240
              + G G +GL  ++  +A GA RII  D++  + + A+ +GA E      + +D    
Sbjct: 193 TCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATEC----VNPQDYKKP 248
Query: 241 VGKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTP---- 294
           + ++   M + G+D SF+ +G   TM  AL+  +   G   ++G+      +++ P    
Sbjct: 249 IQEVLTEMSNGGVDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLL 308
Query: 295 -AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGN 353
                +  + G F+ + + P  +    + K  + PLITH   F  ++I + F++  + G 
Sbjct: 309 SGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-LRSGK 365
Query: 354 AIKVMFNL 361
           +I+ +   
Sbjct: 366 SIRTILTF 373

>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant Length = 374

Iteration: 1
 Score = 96.3 bits (238), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/367 (23%), Positives = 158/367 (43%), Gaps = 40/367 (10%)
Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
           K   I+   +      +V++++ A GIC SD H    +     +   P++ GHE AGI+E
Sbjct: 19  KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDH----VVSGTLVTPLPVIAGHEAAGIVE 74
Query: 84  EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT----------NG 133
            +G  V ++  GD+V       CG C +CK    N C +        T           G
Sbjct: 75  SIGEGVTTVRPGDKVIPLATPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRG 134
Query: 134 SLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANVGPETN 181
              H  +  +    Y + D +S+ +     PL          S G   A + A V   + 
Sbjct: 135 KPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGST 194
Query: 182 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDV 241
             + G G +GL  ++  +A GA RII  D++  + + A+ +GA E      + +D    +
Sbjct: 195 CAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE----CVNPQDYKKPI 250
Query: 242 GKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTP----- 294
            ++   M + G+D SF+ +G   TM TAL+  +   G   ++G+      +++ P     
Sbjct: 251 QEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLS 310
Query: 295 AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNA 354
               +  + G F+ + + P  +    + K  + PLITH   F  ++I + F++  + G +
Sbjct: 311 GRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-LRSGES 367
Query: 355 IKVMFNL 361
           I+ +   
Sbjct: 368 IRTILTF 374

>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score = 96.3 bits (238), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 90/356 (25%), Positives = 154/356 (43%), Gaps = 44/356 (12%)
Query: 38  PQDVKVRIK--ALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVG 95
           P+  +VRIK  A+GIC +D H    +   N +   P+++GHE AGI+E VG  V +++ G
Sbjct: 31  PKAYEVRIKMVAVGICHTDDH----VVSGNLVTPLPVILGHEAAGIVESVGEGVTTVKPG 86
Query: 96  DRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP-----------PTNGSLAHKVVHPAK 144
           D+V       CG C +CK    N C +    G+P              G   H  +  + 
Sbjct: 87  DKVIPLFTPQCGKCRVCKNPESNYCLKND-LGNPRGTLQDGTRRFTCRGKPIHHFLGTST 145
Query: 145 LC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANVGPETNVMIMGSGPIGL 192
              Y + D  ++ +     PL          S G   A   A V P +   + G G +GL
Sbjct: 146 FSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGL 205
Query: 193 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM-GSG 251
             ++  +A GA RII  D++  + + A+ LGA E      + +D    + ++   M   G
Sbjct: 206 SAVMGCKAAGAARIIAVDINKDKFAKAKELGATE----CINPQDYKKPIQEVLKEMTDGG 261
Query: 252 IDVSFDCVG-FDKTMSTALNATRPGGKVCLIGLAKTEMTVALTP-----AAAREVDVIGI 305
           +D SF+ +G  D  M++ L      G   ++G+      +++ P         +  V G 
Sbjct: 262 VDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLTGRTWKGAVYGG 321
Query: 306 FRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361
           F+ +   P  +    + K  +  LITH   F  ++I + F++    G +I+ +   
Sbjct: 322 FKSKEGIPKLVADFMAKKFSLDALITHVLPF--EKINEGFDL-LHSGKSIRTVLTF 374

>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10 MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+ And 1 Mm 4-Iodopyrazole At 25 C Length = 374

Iteration: 1
 Score = 95.9 bits (237), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 90/353 (25%), Positives = 153/353 (43%), Gaps = 43/353 (12%)
Query: 38  PQDVKVRIK--ALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVG 95
           P+  +VRIK  A+GIC +D H    +   N +   P+++GHE AGI+E VG  V +++ G
Sbjct: 31  PKAYEVRIKMVAVGICRTDDH----VVSGNLVTPLPVILGHEAAGIVESVGEGVTTVKPG 86
Query: 96  DRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP-----------PTNGSLAHKVVHPAK 144
           D+V       CG C +CK    N C +    G+P              G   H  +  + 
Sbjct: 87  DKVIPLFTPQCGKCRVCKNPESNYCLKND-LGNPRGTLQDGTRRFTCRGKPIHHFLGTST 145
Query: 145 LC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANVGPETNVMIMGSGPIGL 192
              Y + D  ++ +     PL          S G   A   A V P +   + G G +GL
Sbjct: 146 FSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGL 205
Query: 193 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM-GSG 251
             ++  +A GA RII  D++  + + A+ LGA E      + +D    + ++   M   G
Sbjct: 206 SAVMGCKAAGAARIIAVDINKDKFAKAKELGATE----CINPQDYKKPIQEVLKEMTDGG 261
Query: 252 IDVSFDCVG-FDKTMSTALNATRPGGKVCLIGLAKTEMTVALTP-----AAAREVDVIGI 305
           +D SF+ +G  D  M++ L      G   ++G+      +++ P         +  V G 
Sbjct: 262 VDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLTGRTWKGAVYGG 321
Query: 306 FRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 358
           F+ +   P  +    + K  +  LITH   F  ++I + F++   G +   V+
Sbjct: 322 FKSKEGIPKLVADFMAKKFSLDALITHVLPF--EKINEGFDLLHSGKSICTVL 372

>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score = 95.9 bits (237), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 90/356 (25%), Positives = 154/356 (43%), Gaps = 44/356 (12%)
Query: 38  PQDVKVRIK--ALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVG 95
           P+  +VRIK  A+GIC +D H    +   N +   P+++GHE AGI+E VG  V +++ G
Sbjct: 31  PKAYEVRIKMVAVGICRTDDH----VVSGNLVTPLPVILGHEAAGIVESVGEGVTTVKPG 86
Query: 96  DRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP-----------PTNGSLAHKVVHPAK 144
           D+V       CG C +CK    N C +    G+P              G   H  +  + 
Sbjct: 87  DKVIPLFTPQCGKCRVCKNPESNYCLKND-LGNPRGTLQDGTRRFTCRGKPIHHFLGTST 145
Query: 145 LC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANVGPETNVMIMGSGPIGL 192
              Y + D  ++ +     PL          S G   A   A V P +   + G G +GL
Sbjct: 146 FSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGL 205
Query: 193 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM-GSG 251
             ++  +A GA RII  D++  + + A+ LGA E      + +D    + ++   M   G
Sbjct: 206 SAVMGCKAAGAARIIAVDINKDKFAKAKELGATE----CINPQDYKKPIQEVLKEMTDGG 261
Query: 252 IDVSFDCVG-FDKTMSTALNATRPGGKVCLIGLAKTEMTVALTP-----AAAREVDVIGI 305
           +D SF+ +G  D  M++ L      G   ++G+      +++ P         +  V G 
Sbjct: 262 VDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPASQNLSINPMLLLTGRTWKGAVYGG 321
Query: 306 FRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361
           F+ +   P  +    + K  +  LITH   F  ++I + F++    G +I+ +   
Sbjct: 322 FKSKEGIPKLVADFMAKKFSLDALITHVLPF--EKINEGFDL-LHSGKSIRTVLTF 374

>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of Horse Liver Alcohol Dehydrogenase In Complex With Nad And Inhibitor Trifluoroethanol Length = 374

Iteration: 1
 Score = 95.5 bits (236), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 87/367 (23%), Positives = 158/367 (43%), Gaps = 40/367 (10%)
Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
           K   I+   +      +V++++ A GIC SD H    +     +   P++ GHE AGI+E
Sbjct: 19  KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDH----VVSGTLVTPLPVIAGHEAAGIVE 74
Query: 84  EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT----------NG 133
            +G  V ++  GD+V       CG C +CK    N C +        T           G
Sbjct: 75  SIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRG 134
Query: 134 SLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANVGPETN 181
              H  +  +    Y + D +S+ +     PL          S G   A + A V   + 
Sbjct: 135 KPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGST 194
Query: 182 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDV 241
             + G G +GL  ++  +A GA RII  D++  + + A+ +GA E      + +D    +
Sbjct: 195 CAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE----CVNPQDYKKPI 250
Query: 242 GKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTP----- 294
            ++   M + G+D SF+ +G   TM TAL+  +   G   ++G+      +++ P     
Sbjct: 251 QEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLS 310
Query: 295 AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNA 354
               +  + G F+ + + P  +    + K  + PLITH   F  ++I + F++  + G +
Sbjct: 311 GRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-LRSGES 367
Query: 355 IKVMFNL 361
           I+ +   
Sbjct: 368 IRTILTF 374

>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver Alcohol Dehydrogenase At 2.9 Angstroms Resolution Length = 374

Iteration: 1
 Score = 95.5 bits (236), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 87/367 (23%), Positives = 158/367 (43%), Gaps = 40/367 (10%)
Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
           K   I+   +      +V++++ A GIC SD H    +     +   P++ GHE AGI+E
Sbjct: 19  KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDH----VVSGTLVTPLPVIAGHEAAGIVE 74
Query: 84  EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT----------NG 133
            +G  V ++  GD+V       CG C +CK    N C +        T           G
Sbjct: 75  SIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRG 134
Query: 134 SLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANVGPETN 181
              H  +  +    Y + D +S+ +     PL          S G   A + A V   + 
Sbjct: 135 KPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGST 194
Query: 182 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDV 241
             + G G +GL  ++  +A GA RII  D++  + + A+ +GA E      + +D    +
Sbjct: 195 CAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE----CVNPQDYKKPI 250
Query: 242 GKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTP----- 294
            ++   M + G+D SF+ +G   TM TAL+  +   G   ++G+      +++ P     
Sbjct: 251 QEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLS 310
Query: 295 AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNA 354
               +  + G F+ + + P  +    + K  + PLITH   F  ++I + F++  + G +
Sbjct: 311 GRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-LRSGES 367
Query: 355 IKVMFNL 361
           I+ +   
Sbjct: 368 IRTILTF 374

>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase (Adh4) In Complex With Nad And Zn Length = 381

Iteration: 1
 Score = 95.1 bits (235), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 95/371 (25%), Positives = 164/371 (44%), Gaps = 51/371 (13%)
Query: 18  AWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFI-VKKPMVIGH 76
           AW  G K L I+   +      +V+++I A  +C +D     T+  + F  +  P+++GH
Sbjct: 16  AWEAG-KPLCIEEVEVAPPKAHEVRIQIIATSLCHTDA----TVIDSKFEGLAFPVIVGH 70
Query: 77  ECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSL- 135
           E AGI+E +G  V +++ GD+V       C  C  C +   NLC ++    SP ++  L 
Sbjct: 71  EAAGIVESIGPGVTNVKPGDKVIPLYAPLCRKCKFCLSPLTNLCGKISNLKSPASDQQLM 130
Query: 136 ------------------------AHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHA 170
                                    + VV    L  K+ D+ +LE   +     S G  A
Sbjct: 131 EDKTSRFTCKGKPVYHFFGTSTFSQYTVVSDINLA-KIDDDANLERVCLLGCGFSTGYGA 189
Query: 171 C-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAK 229
               A V P +   + G G +GL  ++  +A GA RII  D++ ++   A+ LGA +   
Sbjct: 190 AINNAKVTPGSTCAVFGLGGVGLSAVMGCKAAGASRIIGIDINSEKFVKAKALGATDCLN 249
Query: 230 ---VSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVC-LIGLAK 285
              +   I++V  ++ K       G+D + DC G  +TM  AL+ T  G   C  IG+A 
Sbjct: 250 PRDLHKPIQEVIIELTK------GGVDFALDCAGGSETMKAALDCTTAGWGSCTFIGVAA 303
Query: 286 TEMTVALTPAA---AREVD--VIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKE 340
               + + P      R ++    G ++   + P  +   ++ K ++  L+TH   F +  
Sbjct: 304 GSKGLTVFPEELIIGRTINGTFFGGWKSVDSIPKLVTDYKNKKFNLDALVTHTLPFDK-- 361
Query: 341 IEDAFEISAQG 351
           I +AF++  QG
Sbjct: 362 ISEAFDLMNQG 372

>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant Complexed To Nad+ And Pyrazole Length = 374

Iteration: 1
 Score = 95.1 bits (235), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 88/367 (23%), Positives = 158/367 (43%), Gaps = 40/367 (10%)
Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
           K   I+   +      +V++++ A GIC SD H    +     +   P++ GHE AGI+E
Sbjct: 19  KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDH----VVSGTLVTPLPVIAGHEAAGIVE 74
Query: 84  EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT----------NG 133
            +G  V ++  GD+V       CG C +CK    N C +        T           G
Sbjct: 75  SIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRG 134
Query: 134 SLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANVGPETN 181
              H  +  +    Y + D +S+ +     PL          S G   A + A V   + 
Sbjct: 135 KPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGST 194
Query: 182 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDV 241
             + G G +GL  ++  +A GA RII  D++  + + A+ +GA E      + +D    +
Sbjct: 195 CAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE----CVNPQDYKKPI 250
Query: 242 GKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRPGGKVCLI-GLAKTEMTVALTP----- 294
            ++   M + G+D SF+ +G   TM TAL+  +    V +I G+      +++ P     
Sbjct: 251 QEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVITGVPPDSQNLSMNPMLLLS 310
Query: 295 AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNA 354
               +  + G F+ + + P  +    + K  + PLITH   F  ++I + F++  + G +
Sbjct: 311 GRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-LRSGES 367
Query: 355 IKVMFNL 361
           I+ +   
Sbjct: 368 IRTILTF 374

>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant Length = 374

Iteration: 1
 Score = 94.7 bits (234), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 88/367 (23%), Positives = 158/367 (43%), Gaps = 40/367 (10%)
Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
           K   I+   +      +V++++ A GIC SD H    +     +   P++ GHE AGI+E
Sbjct: 19  KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDH----VVSGTLVTPLPVIAGHEAAGIVE 74
Query: 84  EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT----------NG 133
            +G  V ++  GD+V       CG C +CK    N C +        T           G
Sbjct: 75  SIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRG 134
Query: 134 SLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANVGPETN 181
              H  +  +    Y + D +S+ +     PL          S G   A + A V   + 
Sbjct: 135 KPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGST 194
Query: 182 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDV 241
             + G G +GL  ++  +A GA RII  D++  + + A+ +GA E      + +D    +
Sbjct: 195 CAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE----CVNPQDYKKPI 250
Query: 242 GKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRPGGKVCLI-GLAKTEMTVALTP----- 294
            ++   M + G+D SF+ +G   TM TAL+  +    V +I G+      +++ P     
Sbjct: 251 QEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVISGVPPDSQNLSMNPMLLLS 310
Query: 295 AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNA 354
               +  + G F+ + + P  +    + K  + PLITH   F  ++I + F++  + G +
Sbjct: 311 GRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-LRSGES 367
Query: 355 IKVMFNL 361
           I+ +   
Sbjct: 368 IRTILTF 374

>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol Length = 374

Iteration: 1
 Score = 94.7 bits (234), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 89/371 (23%), Positives = 160/371 (43%), Gaps = 48/371 (12%)
Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
           K   I+   +      +V++++ A GIC SD H    +     +   P++ GHE AGI+E
Sbjct: 19  KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDH----VVSGTLVTPLPVIAGHEAAGIVE 74
Query: 84  EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE--------------MRFFGSP 129
            +G  V ++  GD+V       CG C +CK    N C +               RF    
Sbjct: 75  SIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRF---- 130
Query: 130 PTNGSLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANVG 177
              G   H  +  +    Y + D +S+ +     PL          S G   A + A V 
Sbjct: 131 TCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVT 190
Query: 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDV 237
             +   + G G +GL  ++  +A GA RII  D++  + + A+ +GA E      + +D 
Sbjct: 191 QGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE----CVNPQDY 246
Query: 238 DTDVGKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTPA 295
              + ++   M + G+D SF+ +G   TM TAL+  +   G   ++G+      +++ P 
Sbjct: 247 KKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPM 306
Query: 296 ---AAREVD--VIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQ 350
              + R     + G F+ + + P  +    + K  + PLITH   F  ++I + F++  +
Sbjct: 307 LLLSGRTWKGCIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-LR 363
Query: 351 GGNAIKVMFNL 361
            G +I+ +   
Sbjct: 364 SGESIRTILTF 374

>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a) Length = 374

Iteration: 1
 Score = 94.7 bits (234), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 91/373 (24%), Positives = 162/373 (43%), Gaps = 47/373 (12%)
Query: 19  WLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHEC 78
           W L  K   I+   +      +V++++ A+GICG+D H    +     +   P+++GHE 
Sbjct: 15  WELK-KPFSIEEVEVAPPKAHEVRIKMVAVGICGTDDH----VVSGTMVTPLPVILGHEA 69
Query: 79  AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLA-- 136
           AGI+E VG  V +++ GD+V       CG C +CK    N C  ++   S P  G+L   
Sbjct: 70  AGIVESVGEGVTTVKPGDKVIPLAIPQCGKCRICKNPESNYC--LKNDVSNP-QGTLQDG 126
Query: 137 -------HKVVHPAKLCYKLPDNVSLEEGAMCE-----PL----------SVGV-HACRR 173
                   K +H             ++E A+ +     PL          S G   A   
Sbjct: 127 TSRFTCRRKPIHHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNV 186
Query: 174 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTD 233
           A V P +   + G G +GL  ++  +A GA RII  D++  + + A+ LGA E      +
Sbjct: 187 AKVTPGSTCAVFGLGGVGLSAIMGCKAAGAARIIAVDINKDKFAKAKELGATE----CIN 242
Query: 234 IEDVDTDVGKIQNAM-GSGIDVSFDCVG-FDKTMSTALNATRPGGKVCLIGLAKTEMTVA 291
            +D    + ++   M   G+D SF+ +G  D  M++ L      G   ++G+      ++
Sbjct: 243 PQDYKKPIQEVLKEMTDGGVDFSFEVIGRLDTMMASLLCCHEACGTSVIVGVPPDSQNLS 302
Query: 292 LTP-----AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFE 346
           + P         +  ++G F+ +   P  +    + K  +  LITH   F  ++I + F+
Sbjct: 303 MNPMLLLTGRTWKGAILGGFKSKECVPKLVADFMAKKFSLDALITHVLPF--EKINEGFD 360
Query: 347 ISAQGGNAIKVMF 359
           +    G +I+ + 
Sbjct: 361 L-LHSGKSIRTIL 372

>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol Length = 374

Iteration: 1
 Score = 94.4 bits (233), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 87/367 (23%), Positives = 157/367 (42%), Gaps = 40/367 (10%)
Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
           K   I+   +      +V++++ A GIC SD      +     +   P++ GHE AGI+E
Sbjct: 19  KPFSIEEVEVAPPKAHEVRIKMVATGICRSD----DQVVSGTLVTPLPVIAGHEAAGIVE 74
Query: 84  EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT----------NG 133
            +G  V ++  GD+V       CG C +CK    N C +        T           G
Sbjct: 75  SIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRG 134
Query: 134 SLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANVGPETN 181
              H  +  +    Y + D +S+ +     PL          S G   A + A V   + 
Sbjct: 135 KPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGST 194
Query: 182 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDV 241
             + G G +GL  ++  +A GA RII  D++  R + A+ +GA E      + +D    +
Sbjct: 195 CAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDRFAKAKEVGATE----CVNPQDYKKPI 250
Query: 242 GKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTP----- 294
            ++   M + G+D SF+ +G   TM TAL+  +   G   ++G+      +++ P     
Sbjct: 251 QEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLS 310
Query: 295 AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNA 354
               +  + G F+ + + P  +    + K  + PLITH   F  ++I + F++  + G +
Sbjct: 311 GRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-LRSGES 367
Query: 355 IKVMFNL 361
           I+ +   
Sbjct: 368 IRTILTF 374

>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With Nad And Trifluoroethanol Length = 374

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/367 (23%), Positives = 157/367 (42%), Gaps = 40/367 (10%)
Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
           K   I+   +      +V++++ A GIC SD H    +     +   P++ GHE AGI+E
Sbjct: 19  KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDH----VVSGTLVTPLPVIAGHEAAGIVE 74
Query: 84  EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT----------NG 133
            +G  V ++  GD+V       CG C +CK    N C +        T           G
Sbjct: 75  SIGEGVTTVRPGDKVIPLWTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRG 134
Query: 134 SLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANVGPETN 181
              H  +  +    Y + D +S+ +     PL          S G   A + A V   + 
Sbjct: 135 KPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGST 194
Query: 182 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDV 241
             + G G  GL  ++  +A GA RII  D++  + + A+ +GA E      + +D    +
Sbjct: 195 CAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE----CVNPQDYKKPI 250
Query: 242 GKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTP----- 294
            ++   M + G+D SF+ +G   TM TAL+  +   G   ++G+      +++ P     
Sbjct: 251 QEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLS 310
Query: 295 AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNA 354
               +  + G F+ + + P  +    + K  + PLITH   F  ++I + F++  + G +
Sbjct: 311 GRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-LRSGES 367
Query: 355 IKVMFNL 361
           I+ +   
Sbjct: 368 IRTILTF 374

>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double Mutant Of Gly 293 Ala And Pro 295 Thr Length = 374

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/367 (23%), Positives = 157/367 (42%), Gaps = 40/367 (10%)
Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
           K   I+   +      +V++++ A GIC SD H    +     +   P++ GHE AGI+E
Sbjct: 19  KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDH----VVSGTLVTPLPVIAGHEAAGIVE 74
Query: 84  EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT----------NG 133
            +G  V ++  GD+V       CG C +CK    N C +        T           G
Sbjct: 75  SIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRG 134
Query: 134 SLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANVGPETN 181
              H  +  +    Y + D +S+ +     PL          S G   A + A V   + 
Sbjct: 135 KPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGST 194
Query: 182 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDV 241
             + G G +GL  ++  +A GA RII  D++  + + A+ +GA E      + +D    +
Sbjct: 195 CAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE----CVNPQDYKKPI 250
Query: 242 GKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTP----- 294
            ++   M + G+D SF+ +G   TM TAL+  +   G   ++ +      +++ P     
Sbjct: 251 QEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVAVTPDSQNLSMNPMLLLS 310
Query: 295 AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNA 354
               +  + G F+ + + P  +    + K  + PLITH   F  ++I + F++  + G +
Sbjct: 311 GRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-LRSGES 367
Query: 355 IKVMFNL 361
           I+ +   
Sbjct: 368 IRTILTF 374

>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver Alcohol Dehydrogenase Complexed With Cofactor Nad And Inhibitor Trifluoroethanol Solved To 2.5 Angstrom Resolution Length = 374

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/367 (23%), Positives = 157/367 (42%), Gaps = 40/367 (10%)
Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
           K   I+   +      +V++++ A GIC SD H    +     +   P++ GHE AGI+E
Sbjct: 19  KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDH----VVSGTLVTPLPVIAGHEAAGIVE 74
Query: 84  EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT----------NG 133
            +G  V ++  GD+V       CG C +CK    N C +        T           G
Sbjct: 75  SIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRG 134
Query: 134 SLAHKVVHPAKLC-YKLPDNVSLEEGAMCEPL----------SVGV-HACRRANVGPETN 181
              H  +  +    Y + D +S+ +     PL          S G   A + A V   + 
Sbjct: 135 KPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGST 194
Query: 182 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDV 241
             + G G  GL  ++  +A GA RII  D++  + + A+ +GA E      + +D    +
Sbjct: 195 CAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE----CVNPQDYKKPI 250
Query: 242 GKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTP----- 294
            ++   M + G+D SF+ +G   TM TAL+  +   G   ++G+      +++ P     
Sbjct: 251 QEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLS 310
Query: 295 AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNA 354
               +  + G F+ + + P  +    + K  + PLITH   F  ++I + F++  + G +
Sbjct: 311 GRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDL-LRSGES 367
Query: 355 IKVMFNL 361
           I+ +   
Sbjct: 368 IRTILTF 374

>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From Acinetobacter Calcoaceticus Length = 371

Iteration: 1
 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 128/274 (46%), Gaps = 42/274 (15%)
Query: 38  PQ--DVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVG 95
           PQ  +V V++ A G+C +D+     +R   + V  P V+GHE +GIIE +G  V  L+VG
Sbjct: 29  PQGDEVLVKVVATGMCHTDL----IVRDQKYPVPLPAVLGHEGSGIIEAIGPNVTELQVG 84
Query: 96  DRVALEPGISCGHCSLCKAGSYNLCPEM--RFFGSPPTNGSLA-----------HKVVHP 142
           D V L  G  CG C+ C  G+   C E   R F    + G+ A           H     
Sbjct: 85  DHVVLSYGY-CGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQS 143
Query: 143 AKLCY---------KLPDNVSLEEGAMCEPLSVGVH----ACRRA-NVGPETNVMIMGSG 188
           +   Y         K+  +V +E   +  PL  G+     AC  A  V P ++ +  G+G
Sbjct: 144 SFATYALSRENNTVKVTKDVPIE---LLGPLGCGIQTGAGACINALKVTPASSFVTWGAG 200
Query: 189 PIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM 248
            +GL  LLAA+  GA  II  D+   RL +A+ LGA  T  +++  +D    V  I+   
Sbjct: 201 AVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGA--THVINSKTQD---PVAAIKEIT 255
Query: 249 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG 282
             G++ + +  G  + +   ++A    GK+ ++G
Sbjct: 256 DGGVNFALESTGSPEILKQGVDALGILGKIAVVG 289

>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With S-(Hydroxymethyl)glutathione And Nadh Length = 374

Iteration: 1
 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 97/377 (25%), Positives = 153/377 (40%), Gaps = 47/377 (12%)
Query: 8   DEGDKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFI 67
           +E  K +   AW  G K L I+   +      +V+++I A  +C +D +   T+  A+  
Sbjct: 3   NEVIKCKAAVAWEAG-KPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY---TLSGADPE 58
Query: 68  VKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF- 126
              P+++GHE AGI+E VG  V  L+ GD V       CG C  C     NLC ++R   
Sbjct: 59  GCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQ 118
Query: 127 --GSPPTNGS--------LAHKVVHPAKLCYKLPDNVSLEEGAMCEPL----------SV 166
             G  P   S        + H +       Y +  ++S+ +     PL          S 
Sbjct: 119 GKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGIST 178
Query: 167 GV-HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD 225
           G   A   A + P +   + G G +GL  ++  +  GA RII  D++  + + A+  GA 
Sbjct: 179 GYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGAT 238
Query: 226 ETAKVSTDIEDVDTDVGKIQNAM-GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA 284
           E      + +D    + ++   M   G+D SF+C+G  K M  AL A   G         
Sbjct: 239 E----CINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG----WGVSV 290
Query: 285 KTEMTVALTPAAAREVDVIGIFRYRST----W------PLCIEFLRSGKIDVKPLITHRF 334
              +  +    A R   ++    ++ T    W      P  +    S KI V   +TH  
Sbjct: 291 VVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNL 350
Query: 335 GFTQKEIEDAFEISAQG 351
            F   EI  AFE+   G
Sbjct: 351 SF--DEINKAFELMHSG 365

>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With N6022 Length = 374

Iteration: 1
 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 97/377 (25%), Positives = 153/377 (40%), Gaps = 47/377 (12%)
Query: 8   DEGDKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFI 67
           +E  K +   AW  G K L I+   +      +V+++I A  +C +D +   T+  A+  
Sbjct: 3   NEVIKCKAAVAWEAG-KPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY---TLSGADPE 58
Query: 68  VKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF- 126
              P+++GHE AGI+E VG  V  L+ GD V       CG C  C     NLC ++R   
Sbjct: 59  GCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQ 118
Query: 127 --GSPPTNGS--------LAHKVVHPAKLCYKLPDNVSLEEGAMCEPL----------SV 166
             G  P   S        + H +       Y +  ++S+ +     PL          S 
Sbjct: 119 GKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGIST 178
Query: 167 GV-HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD 225
           G   A   A + P +   + G G +GL  ++  +  GA RII  D++  + + A+  GA 
Sbjct: 179 GYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGAT 238
Query: 226 ETAKVSTDIEDVDTDVGKIQNAM-GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA 284
           E      + +D    + ++   M   G+D SF+C+G  K M  AL A   G         
Sbjct: 239 E----CINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG----WGVSV 290
Query: 285 KTEMTVALTPAAAREVDVIGIFRYRST----W------PLCIEFLRSGKIDVKPLITHRF 334
              +  +    A R   ++    ++ T    W      P  +    S KI V   +TH  
Sbjct: 291 VVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNL 350
Query: 335 GFTQKEIEDAFEISAQG 351
            F   EI  AFE+   G
Sbjct: 351 SF--DEINKAFELMHSG 365

>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A Glutathione- Dependent Formaldehyde Dehydrogenase) Length = 373

Iteration: 1
 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 97/377 (25%), Positives = 153/377 (40%), Gaps = 47/377 (12%)
Query: 8   DEGDKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFI 67
           +E  K +   AW  G K L I+   +      +V+++I A  +C +D +   T+  A+  
Sbjct: 2   NEVIKCKAAVAWEAG-KPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY---TLSGADPE 57
Query: 68  VKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF- 126
              P+++GHE AGI+E VG  V  L+ GD V       CG C  C     NLC ++R   
Sbjct: 58  GCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQ 117
Query: 127 --GSPPTNGS--------LAHKVVHPAKLCYKLPDNVSLEEGAMCEPL----------SV 166
             G  P   S        + H +       Y +  ++S+ +     PL          S 
Sbjct: 118 GKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGIST 177
Query: 167 GV-HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD 225
           G   A   A + P +   + G G +GL  ++  +  GA RII  D++  + + A+  GA 
Sbjct: 178 GYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGAT 237
Query: 226 ETAKVSTDIEDVDTDVGKIQNAM-GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA 284
           E      + +D    + ++   M   G+D SF+C+G  K M  AL A   G         
Sbjct: 238 E----CINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG----WGVSV 289
Query: 285 KTEMTVALTPAAAREVDVIGIFRYRST----W------PLCIEFLRSGKIDVKPLITHRF 334
              +  +    A R   ++    ++ T    W      P  +    S KI V   +TH  
Sbjct: 290 VVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNL 349
Query: 335 GFTQKEIEDAFEISAQG 351
            F   EI  AFE+   G
Sbjct: 350 SF--DEINKAFELMHSG 364

>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed With Nicotinamide Adenine Dinucleotide (Nad), And Zinc Length = 374

Iteration: 1
 Score = 88.6 bits (218), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 86/369 (23%), Positives = 150/369 (40%), Gaps = 44/369 (11%)
Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHH-FKTMRCANFIVKKPMVIGHECAGII 82
           K L I+   +      +++++I A G+C +D++H F+      F    P+V+GHE AGI+
Sbjct: 19  KPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGF----PVVLGHEGAGIV 74
Query: 83  EEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE-------------------- 122
           E VG  V   + G++V       CG C  C++   N C +                    
Sbjct: 75  ESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCK 134
Query: 123 ----MRFFGSPPTNGSLAHKVVHPAKLCYKLP-DNVSLEEGAMCEPLSVGVHACRRANVG 177
               ++F G+   +       +  AK+    P D V L    +       V+    A V 
Sbjct: 135 GRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNT---AKVE 191
Query: 178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDV 237
           P +   + G G +GL  ++   + GA RII  D++  +   A+  GA +    +   E +
Sbjct: 192 PGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPI 251
Query: 238 DTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAK----TEMTVAL 292
              + K+ N    G+D S +CVG    M  AL +   G G   L+G           + L
Sbjct: 252 SQVLSKMTNG---GVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQL 308
Query: 293 TPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGG 352
                 +  + G F+ +   P  ++     K+ +   ITHR     + + DA ++    G
Sbjct: 309 IAGRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPL--ESVNDAIDLMKH-G 365
Query: 353 NAIKVMFNL 361
             I+ + +L
Sbjct: 366 KCIRTVLSL 374

>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate Alcohol Dehydrogenase (Adh8) Length = 373

Iteration: 1
 Score = 88.2 bits (217), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 88/367 (23%), Positives = 153/367 (41%), Gaps = 44/367 (11%)
Query: 21  LGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAG 80
           L ++T+ + P         +V+++I A GICGSD    K +  + F    P+++GHE  G
Sbjct: 22  LSLETITVAPPK-----AHEVRIKILASGICGSDSSVLKEIIPSKF----PVILGHEAVG 72
Query: 81  IIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVV 140
           ++E +G+ V  ++ GD+V       CG C  CK+ + N C +            +  +  
Sbjct: 73  VVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFT 132
Query: 141 HPAKLCYKLPDNVSLEEGAMCEPLSVG-------VHAC--------------RRANVGPE 179
              K  Y L    +  E  +   ++V        + +C                A V P 
Sbjct: 133 CRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLESCLIGCGFATGYGAAVNTAKVTPG 192
Query: 180 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDT 239
           +   + G G +G   ++  +A GA RII       +   A  LGA E      + +D D 
Sbjct: 193 STCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATE----CLNPKDYDK 248
Query: 240 DVGK-IQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAK-----TEMTVAL 292
            + + I      G+D + +C G  +TM  AL +T  G G   ++GLA          + L
Sbjct: 249 PIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLL 308
Query: 293 TPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGG 352
               + +  V G F+      L  ++++  KI+V  L++ +   T  +I  AFE+ + G 
Sbjct: 309 LTGRSLKGSVFGGFKGEEVSRLVDDYMKK-KINVNFLVSTK--LTLDQINKAFELLSSGQ 365
Query: 353 NAIKVMF 359
               +M 
Sbjct: 366 GVRSIMI 372

>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With Nad(H) Length = 373

Iteration: 1
 Score = 85.9 bits (211), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 96/377 (25%), Positives = 152/377 (40%), Gaps = 47/377 (12%)
Query: 8   DEGDKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFI 67
           +E  K +   AW  G K L I+   +      +V+++I A  +C +D +   T+  A+  
Sbjct: 2   NEVIKCKAAVAWEAG-KPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY---TLSGADPE 57
Query: 68  VKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF- 126
              P+++GH  AGI+E VG  V  L+ GD V       CG C  C     NLC ++R   
Sbjct: 58  GCFPVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQ 117
Query: 127 --GSPPTNGS--------LAHKVVHPAKLCYKLPDNVSLEEGAMCEPL----------SV 166
             G  P   S        + H +       Y +  ++S+ +     PL          S 
Sbjct: 118 GKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGIST 177
Query: 167 GV-HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD 225
           G   A   A + P +   + G G +GL  ++  +  GA RII  D++  + + A+  GA 
Sbjct: 178 GYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGAT 237
Query: 226 ETAKVSTDIEDVDTDVGKIQNAM-GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA 284
           E      + +D    + ++   M   G+D SF+C+G  K M  AL A   G         
Sbjct: 238 E----CINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG----WGVSV 289
Query: 285 KTEMTVALTPAAAREVDVIGIFRYRST----W------PLCIEFLRSGKIDVKPLITHRF 334
              +  +    A R   ++    ++ T    W      P  +    S KI V   +TH  
Sbjct: 290 VVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNL 349
Query: 335 GFTQKEIEDAFEISAQG 351
            F   EI  AFE+   G
Sbjct: 350 SF--DEINKAFELMHSG 364

>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine At Position 141 Length = 373

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/352 (24%), Positives = 151/352 (42%), Gaps = 41/352 (11%)
Query: 39  QDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRV 98
           ++V+++I A GIC +D H  K    + F    P+++GHE  GI+E +G  V +++ GD+V
Sbjct: 34  KEVRIKILATGICRTDDHVIKGTMVSKF----PVIVGHEATGIVESIGEGVTTVKPGDKV 89
Query: 99  ALEPGISCGHCSLCKAGSYNLCPEMRFFGSP---------PTNGSLAHKVVHPAKLC-YK 148
                  C  C+ C+    NLC      G              G   H  ++ +    Y 
Sbjct: 90  IPLFLPQCRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPVHHFLNTSTFTEYT 149
Query: 149 LPDNVSLEEGAMCEP----------LSVGV-HACRRANVGPETNVMIMGSGPIGLVTLLA 197
           + D  S+ +     P           S G   A +   V P +  ++ G G +GL  ++ 
Sbjct: 150 VVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMG 209
Query: 198 ARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM-GSGIDVSF 256
            ++ GA RII  D++  +   A  +GA E        +D    + ++ + M G+ +  +F
Sbjct: 210 CKSAGASRIIGIDLNKDKFEKAMAVGATE----CISPKDSTKPISEVLSEMTGNNVGYTF 265
Query: 257 DCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTP-----AAAREVDVIGIFRYRS 310
           + +G  +TM  AL +     G   ++G+  +   +   P         +  V G  + R 
Sbjct: 266 EVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLKSRD 325
Query: 311 TWP-LCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361
             P L  EFL + K D+  LITH   F  K+I + FE+    G +I+ +   
Sbjct: 326 DVPKLVTEFL-AKKFDLDQLITHVLPF--KKISEGFEL-LNSGQSIRTVLTF 373

>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase Length = 373

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/352 (24%), Positives = 152/352 (43%), Gaps = 41/352 (11%)
Query: 39  QDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRV 98
           ++V+++I A GIC +D H  K    + F    P+++GHE  GI+E +G  V +++ GD+V
Sbjct: 34  KEVRIKILATGICRTDDHVIKGTMVSKF----PVIVGHEATGIVESIGEGVTTVKPGDKV 89
Query: 99  ALEPGISCGHCSLCKAGSYNLCPEMRFFG-----SPPTNGSLAHKVVHPAKLCYKLPDNV 153
                  C  C+ C+    NLC      G        T  +   K VH         +  
Sbjct: 90  IPLFLPQCRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPVHHFMNTSTFTEYT 149
Query: 154 SLEEGAMCE------PLSVGVHAC----------RRANVGPETNVMIMGSGPIGLVTLLA 197
            ++E ++ +      P  V +  C          +   V P +  ++ G G +GL  ++ 
Sbjct: 150 VVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMG 209
Query: 198 ARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM-GSGIDVSF 256
            ++ GA RII  D++  +   A  +GA E        +D    + ++ + M G+ +  +F
Sbjct: 210 CKSAGASRIIGIDLNKDKFEKAMAVGATE----CISPKDSTKPISEVLSEMTGNNVGYTF 265
Query: 257 DCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTP-----AAAREVDVIGIFRYRS 310
           + +G  +TM  AL +     G   ++G+  +   +   P         +  V G  + R 
Sbjct: 266 EVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGGLKSRD 325
Query: 311 TWP-LCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361
             P L  EFL + K D+  LITH   F  K+I + FE+    G +I+ +   
Sbjct: 326 DVPKLVTEFL-AKKFDLDQLITHVLPF--KKISEGFEL-LNSGQSIRTVLTF 373

>pdb|1Y9A|A Chain A, Alcohol Dehydrogenase From Entamoeba Histolotica In Complex With Cacodylate Length = 360

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 145/351 (41%), Gaps = 47/351 (13%)
Query: 20  LLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECA 79
           +LGI  +      +P  GP D  VR  AL  C SD H   T+       +  M++GHE  
Sbjct: 6   MLGIGRIGWIEKKIPECGPLDALVRPLALAPCTSDTH---TVWAGAIGDRHDMILGHEAV 62
Query: 80  GIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTN--GSLAH 137
           G I +VGS VK L+VGD+V + P I+           Y +       G   +N    +  
Sbjct: 63  GQIVKVGSLVKRLKVGDKVIV-PAITPDWGEEESQRGYPMHSGGMLGGWKFSNFKDGVFS 121
Query: 138 KVVH----PAKLCYKLPDNVSLEEGAMCEPL-SVGVHACRRANVGPETNVMIMGSGPIGL 192
           +V H     A L   LP ++  E+  M   + + G H    AN+     V ++G GP+GL
Sbjct: 122 EVFHVNEADANLAL-LPRDIKPEDAVMLSDMVTTGFHGAELANIKLGDTVCVIGIGPVGL 180
Query: 193 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI 252
           +++  A   GA RI           IA   GA  T  ++    D+   + K  +  G G+
Sbjct: 181 MSVAGANHLGAGRIFAVGSRKHCCDIALEYGA--TDIINYKNGDIVEQILKATD--GKGV 236
Query: 253 DVSFDCVGFDKTMSTALNATRPG---GKVCLIG------LAKTEMTV---------ALTP 294
           D      G   T + A+   +PG   G V  +G      + ++E  V          LTP
Sbjct: 237 DKVVIAGGXVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLTP 296
Query: 295 AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAF 345
                ++ +               + +GK+D   LITHRF   +K +EDA 
Sbjct: 297 GGRVRMEKLA------------SLISTGKLDTSKLITHRFEGLEK-VEDAL 334

>pdb|2DPH|A Chain A, Crystal Structure Of Formaldehyde Dismutase Length = 398

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 138/308 (44%), Gaps = 49/308 (15%)
Query: 15  NMAAWLLGIKTLKIQPYHLPTLGPQDVKV------RIKALGICGSDVHHFKTMRCANFIV 68
           N +    G + L+++    P L   + K+      ++ +  ICGSD H ++      FIV
Sbjct: 3   NKSVVYHGTRDLRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYR----GRFIV 58
Query: 69  KKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLC------PE 122
            K  V+GHE  G + E GS+V+ +++GD V++   ++CG C  CK    ++C      P+
Sbjct: 59  PKGHVLGHEITGEVVEKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPD 118
Query: 123 MRF----FGSPPTNGSLAHKVVHPAK--LCYKLPDNVSLEEG-----AMCEPLSVGVHAC 171
                  F     +G  A  V+ P    +  K  D     E       + + L  G H C
Sbjct: 119 ADLGAFGFDLKGWSGGQAEYVLVPYADYMLLKFGDKEQAMEKIKDLTLISDILPTGFHGC 178
Query: 172 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE-TAKV 230
             A V P ++V I G+GP+G      AR  GA  +I+ D + +RL +  + G +    + 
Sbjct: 179 VSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFETIDLRN 238
Query: 231 STDIED-VDTDVGKIQNAMGSGIDVSFDCVGFD----------KTMSTALNA----TRPG 275
           S  + D +D  +GK +      +D   D VGF+          +T + ALN+     R G
Sbjct: 239 SAPLRDQIDQILGKPE------VDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAG 292
Query: 276 GKVCLIGL 283
           G + + G+
Sbjct: 293 GAIGIPGI 300

>pdb|2OUI|A Chain A, D275p Mutant Of Alcohol Dehydrogenase From Protozoa Entamoeba Histolytica Length = 360

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 145/351 (41%), Gaps = 47/351 (13%)
Query: 20  LLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECA 79
           +LGI  +      +P  GP D  VR  AL  C SD H   T+       +  M++GHE  
Sbjct: 6   MLGIGRIGWIEKKIPECGPLDALVRPLALAPCTSDTH---TVWAGAIGDRHDMILGHEAV 62
Query: 80  GIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTN--GSLAH 137
           G I +VGS VK L+VGD+V + P I+           Y +       G   +N    +  
Sbjct: 63  GQIVKVGSLVKRLKVGDKVIV-PAITPDWGEEESQRGYPMHSGGMLGGWKFSNFKDGVFS 121
Query: 138 KVVH----PAKLCYKLPDNVSLEEGAMCEPL-SVGVHACRRANVGPETNVMIMGSGPIGL 192
           +V H     A L   LP ++  E+  M   + + G H    AN+     V ++G GP+GL
Sbjct: 122 EVFHVNEADANLAL-LPRDIKPEDAVMLSDMVTTGFHGAELANIKLGDTVCVIGIGPVGL 180
Query: 193 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI 252
           +++  A   GA RI           IA   GA  T  ++    D+   + K  +  G G+
Sbjct: 181 MSVAGANHLGAGRIFAVGSRKHCCDIALEYGA--TDIINYKNGDIVEQILKATD--GKGV 236
Query: 253 DVSFDCVGFDKTMSTALNATRPG---GKVCLIG------LAKTEMTV---------ALTP 294
           D      G   T + A+   +PG   G V  +G      + ++E  V          LTP
Sbjct: 237 DKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIPIPRSEWGVGMGHKHIHGGLTP 296
Query: 295 AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAF 345
                ++ +               + +GK+D   LITHRF   +K +EDA 
Sbjct: 297 GGRVRMEKLA------------SLISTGKLDTSKLITHRFEGLEK-VEDAL 334

>pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of C. Beijerinckii Adh By T. Brockii Adh Length = 351

Iteration: 1
 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 120/273 (43%), Gaps = 28/273 (10%)
Query: 20  LLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECA 79
           +LGI  L       P  G  D  VR  A+  C SD+H   T+       +K M++GHE  
Sbjct: 6   MLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIH---TVFEGALGDRKNMILGHEAV 62
Query: 80  GIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTN------G 133
           G + EVGSEVK  + GDRV + P  +    SL     +         G   +N      G
Sbjct: 63  GEVVEVGSEVKDFKPGDRVIV-PCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFG 121
Query: 134 SLAHKVVHPAKLCYK-LPDNVSLEEGAM-CEPLSVGVHACRRANVGPETNVMIMGSGPIG 191
              H  V+ A +    LP ++ LE   M  + ++ G H    A++     V ++G GP+G
Sbjct: 122 EYFH--VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIELGATVAVLGIGPVG 179
Query: 192 LVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM--- 248
           L+ +  A+  GA RII        +  A+  GA       TDI  V+   G I++ +   
Sbjct: 180 LMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGA-------TDI--VNYKDGPIESQIMNL 230
Query: 249 --GSGIDVSFDCVGFDKTMSTALNATRPGGKVC 279
             G G+D +    G    M+TA+   +PGG + 
Sbjct: 231 TEGKGVDAAIIAGGNADIMATAVKIVKPGGTIA 263

>pdb|2NVB|A Chain A, Contribution Of Pro275 To The Thermostability Of The Alcohol Dehydrogenases (Adhs) Length = 352

Iteration: 1
 Score = 78.6 bits (192), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 139/352 (39%), Gaps = 77/352 (21%)
Query: 34  PTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 93
           P  GP D  VR  A+  C SD+H   T+       +  M++GHE  G + EVGSEVK  +
Sbjct: 20  PAPGPFDAIVRPLAVAPCTSDIH---TVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFK 76
Query: 94  VGDRVALEPGISCGHCSLCKAGSYNLCPEM---------------RFFGSPPTNGSLAHK 138
            GDRV +         S  + G +     M                FF     + +LAH 
Sbjct: 77  PGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAH- 135
Query: 139 VVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLA 197
                     LP  + LE   M  + ++ G H    A++     V ++G GP+GL+ +  
Sbjct: 136 ----------LPKEIPLEAAVMIPDMMTTGFHGAELADIELGATVAVLGIGPVGLMAVAG 185
Query: 198 ARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM-----GSGI 252
           A+  GA RII        +  A+  GA       TDI  V+   G I++ +     G G+
Sbjct: 186 AKLRGAGRIIAVGSRPVCVDAAKYYGA-------TDI--VNYKDGPIESQIMNLTEGKGV 236
Query: 253 DVSFDCVGFDKTMSTALNATRPGGKVCLI------------------GLAKTEMTVALTP 294
           D +    G    M+TA+   +PGG +  +                  G+A   +   L P
Sbjct: 237 DAAIIAGGNADIMATAVKIVKPGGTIANVNYFGEGEVLDVPRLEWGCGMAHKTIKGGLCP 296
Query: 295 AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRF-GFTQKEIEDAF 345
                       R R    + + F +  ++D   L+TH F GF    IE AF
Sbjct: 297 GG----------RLRMERLIDLVFYK--RVDPSKLVTHVFRGFDN--IEKAF 334

>pdb|1YKF|A Chain A, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium Brockii Length = 352

Iteration: 1
 Score = 78.6 bits (192), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 139/352 (39%), Gaps = 77/352 (21%)
Query: 34  PTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 93
           P  GP D  VR  A+  C SD+H   T+       +  M++GHE  G + EVGSEVK  +
Sbjct: 20  PAPGPFDAIVRPLAVAPCTSDIH---TVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFK 76
Query: 94  VGDRVALEPGISCGHCSLCKAGSYNLCPEM---------------RFFGSPPTNGSLAHK 138
            GDRV +         S  + G +     M                FF     + +LAH 
Sbjct: 77  PGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAH- 135
Query: 139 VVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLA 197
                     LP  + LE   M  + ++ G H    A++     V ++G GP+GL+ +  
Sbjct: 136 ----------LPKEIPLEAAVMIPDMMTTGFHGAELADIELGATVAVLGIGPVGLMAVAG 185
Query: 198 ARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM-----GSGI 252
           A+  GA RII        +  A+  GA       TDI  V+   G I++ +     G G+
Sbjct: 186 AKLRGAGRIIAVGSRPVCVDAAKYYGA-------TDI--VNYKDGPIESQIMNLTEGKGV 236
Query: 253 DVSFDCVGFDKTMSTALNATRPGGKVCLI------------------GLAKTEMTVALTP 294
           D +    G    M+TA+   +PGG +  +                  G+A   +   L P
Sbjct: 237 DAAIIAGGNADIMATAVKIVKPGGTIANVNYFGEGEVLPVPRLEWGCGMAHKTIKGGLCP 296
Query: 295 AAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRF-GFTQKEIEDAF 345
                       R R    + + F +  ++D   L+TH F GF    IE AF
Sbjct: 297 GG----------RLRMERLIDLVFYK--RVDPSKLVTHVFRGFDN--IEKAF 334

>pdb|1KOL|A Chain A, Crystal Structure Of Formaldehyde Dehydrogenase Length = 398

Iteration: 1
 Score = 78.2 bits (191), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 86/323 (26%), Positives = 140/323 (43%), Gaps = 52/323 (16%)
Query: 15  NMAAWLLGIKTLKIQPYHLPTL-GPQDVKV------RIKALGICGSDVHHFKTMRCANFI 67
           N     LG   +++Q    P +  P+  K+      ++ +  ICGSD H  +    A   
Sbjct: 3   NRGVVYLGSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTAQV- 61
Query: 68  VKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMR--- 124
               +V+GHE  G + E G +V++L++GD V++   ++CG C  CK     +C  +    
Sbjct: 62  ---GLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPAR 118
Query: 125 ------FFGSPPTNGSLAHKVVHPAK--LCYKLPDNVSLEEG-----AMCEPLSVGVHAC 171
                 +       G  A  V+ P       KLPD     E       + + L  G H  
Sbjct: 119 AGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGA 178
Query: 172 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS 231
             A VGP + V + G+GP+GL    +AR  GA  +I+ D++  RL+ A+  G  E A +S
Sbjct: 179 VTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGF-EIADLS 237
Query: 232 TDI---EDVDTDVGKIQNAMGSGIDVSFDCVGFD---------------KTMSTALNATR 273
            D    E +   +G+ +      +D + D VGF+                 +++ +  TR
Sbjct: 238 LDTPLHEQIAALLGEPE------VDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTR 291
Query: 274 PGGKVCLIGLAKTEMTVALTPAA 296
             GK+ + GL  TE   A+  AA
Sbjct: 292 VAGKIGIPGLYVTEDPGAVDAAA 314

>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From Sulfolobus Solfataricus Length = 344

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/311 (23%), Positives = 138/311 (44%), Gaps = 16/311 (5%)
Query: 26  LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEV 85
           L I+  ++P    ++V +RI   G+C +D+  +K +       + P+++GHE AG I EV
Sbjct: 16  LSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGF-RLPIILGHENAGTIVEV 74
Query: 86  GSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKL 145
           G E+  ++ GD V +        C  C+ G +N+C      G     G   + +V  ++ 
Sbjct: 75  G-ELAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEYMLVKSSRW 133
Query: 146 CYKLPDNVSLEEGAMCEPLSVGVHACRRA----NVGPETNVMIMGSGPIGLVTLLAARAF 201
             KL     +E   + +  +  + A R+A    +   E  V++ G G + + T+   +A 
Sbjct: 134 LVKLNSLSPVEAAPLADAGTTSMGAIRQALPFISKFAEPVVIVNGIGGLAVYTIQILKAL 193
Query: 202 GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGF 261
                 IT V + R    R+   +  A   ++++D ++ + K+ + +G+ I  + D VG 
Sbjct: 194 MKN---ITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGLGASI--AIDLVGT 248
Query: 262 DKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPL--CIEFL 319
           ++T           G + L+G+    +++     A     ++G   Y S   L   +   
Sbjct: 249 EETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLG-SNYGSLNDLEDVVRLS 307
Query: 320 RSGKIDVKPLI 330
            SGKI  KP I
Sbjct: 308 ESGKI--KPYI 316

>pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii: Crystal Structure Of Mutant With Enhanced Thermal Stability Length = 351

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 121/271 (44%), Gaps = 20/271 (7%)
Query: 20  LLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECA 79
           +LGI  L       P  G  D  VR  A+  C SD+H   T+       +K M++GHE  
Sbjct: 6   MLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIH---TVFEGALGDRKNMILGHEAV 62
Query: 80  GIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTN------G 133
           G + EVGSEVK  + GDRV + P  +    SL     +         G   +N      G
Sbjct: 63  GEVVEVGSEVKDFKPGDRVIV-PCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFG 121
Query: 134 SLAHKVVHPAKLCYK-LPDNVSLEEGAM-CEPLSVGVHACRRANVGPETNVMIMGSGPIG 191
              H  V+ A +    LP ++ LE   M  + ++ G H    A++   ++V+++G G +G
Sbjct: 122 EYFH--VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIEMGSSVVVIGIGAVG 179
Query: 192 LVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST-DIEDVDTDVGKIQNAMGS 250
           L+ +  A+  GA RII        +  A+  GA +        IED    V K+ N  G 
Sbjct: 180 LMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNGHIED---QVMKLTN--GK 234
Query: 251 GIDVSFDCVGFDKTMSTALNATRPGGKVCLI 281
           G+D      G  +T+S A+   +PGG +  I
Sbjct: 235 GVDRVIMAGGGSETLSQAVKMVKPGGIISNI 265

>pdb|1YQD|A Chain A, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+ Length = 366

Iteration: 1
 Score = 75.1 bits (183), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 77/294 (26%), Positives = 136/294 (46%), Gaps = 24/294 (8%)
Query: 19  WLLGIKTLKIQPYHLP--TLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGH 76
           W    ++  + P++      G +DV+ ++   G+C SD+H  K     +     P+V GH
Sbjct: 20  WAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGFSMY---PLVPGH 76
Query: 77  ECAGIIEEVGSEVKSLEVGDRVALEPGI-SCGHCSLCKAGSYNLCPEM------RFFGSP 129
           E  G + EVGS+VK + VGD+V +   + +C  C  C     N CP+M       +    
Sbjct: 77  EIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGT 136
Query: 130 PTNGSLAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMGS 187
            T G  ++ +V   +   + PDN+ L+ GA  +C  ++V           P  ++ I+G 
Sbjct: 137 ITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPLKYFGLDEPGKHIGIVGL 196
Query: 188 GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA 247
           G +G V +  A+AFG+   +I+    ++    +N GAD +  VS D E       ++Q A
Sbjct: 197 GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGAD-SFLVSRDQE-------QMQAA 248
Query: 248 MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTV-ALTPAAAREV 300
            G+ +D   D V     +       +  GK+ L+G  +  + + A +  A R++
Sbjct: 249 AGT-LDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPAFSLIAGRKI 301

>pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 90/347 (25%), Positives = 138/347 (39%), Gaps = 67/347 (19%)
Query: 34  PTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 93
           P  GP D  VR  A+  C SD+H   T+       +  M++GHE  G + EVGSEVK  +
Sbjct: 20  PAPGPFDAIVRPLAVAPCTSDIH---TVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFK 76
Query: 94  VGDRVALEPGISCGHCSLCKAGSYNLCPEM---------------RFFGSPPTNGSLAHK 138
            GDRV +         S  + G +     M                FF     + +LAH 
Sbjct: 77  PGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAH- 135
Query: 139 VVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLA 197
                     LP  + LE   M  + ++ G H    A++   ++V+++G G +GL+ +  
Sbjct: 136 ----------LPKEIPLEAAVMIPDMMTTGFHGAELADIQMGSSVVVIGIGAVGLMGIAG 185
Query: 198 ARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 257
           A+  GA RII        +  A+  GA +          +   V K+ N  G G+D    
Sbjct: 186 AKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HIVDQVMKLTN--GKGVDRVIM 241
Query: 258 CVGFDKTMSTALNATRPGGKVCLI------------------GLAKTEMTVALTPAAARE 299
             G  +T+S A++  +PGG +  I                  G+A   +   L P     
Sbjct: 242 AGGGSETLSQAVSMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGG--- 298
Query: 300 VDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRF-GFTQKEIEDAF 345
                  R R    + + F +  ++D   L+TH F GF    IE AF
Sbjct: 299 -------RLRMERLIDLVFYK--RVDPSKLVTHVFRGFDN--IEKAF 334

>pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form) Length = 351

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 120/270 (44%), Gaps = 18/270 (6%)
Query: 20  LLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECA 79
           +LGI  L       P  G  D  VR  A+  C SD+H   T+       +K M++GHE  
Sbjct: 6   MLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIH---TVFEGALGDRKNMILGHEAV 62
Query: 80  GIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTN------G 133
           G + EVGSEVK  + GDRV + P  +    SL     +         G   +N      G
Sbjct: 63  GEVVEVGSEVKDFKPGDRVIV-PCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFG 121
Query: 134 SLAHKVVHPAKLCYK-LPDNVSLEEGAM-CEPLSVGVHACRRANVGPETNVMIMGSGPIG 191
              H  V+ A +    LP ++ LE   M  + ++ G H    A++   ++V+++G G +G
Sbjct: 122 EYFH--VNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIQMGSSVVVIGIGAVG 179
Query: 192 LVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG 251
           L+ +  A+  GA RII        +  A+  GA +          +   V K+ N  G G
Sbjct: 180 LMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HIVDQVMKLTN--GKG 235
Query: 252 IDVSFDCVGFDKTMSTALNATRPGGKVCLI 281
           +D      G  +T+S A++  +PGG +  I
Sbjct: 236 VDRVIMAGGGSETLSQAVSMVKPGGIISNI 265

>pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE BY EXCHANGE Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 90/347 (25%), Positives = 137/347 (39%), Gaps = 67/347 (19%)
Query: 34  PTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 93
           P  GP D  VR  A+  C SD+H   T+       +  M++GHE  G + EVGSEVK  +
Sbjct: 20  PAPGPFDAIVRPLAVAPCTSDIH---TVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFK 76
Query: 94  VGDRVALEPGISCGHCSLCKAGSYNLCPEM---------------RFFGSPPTNGSLAHK 138
            GDRV +         S  + G +     M                FF     + +LAH 
Sbjct: 77  PGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAH- 135
Query: 139 VVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLA 197
                     LP  + LE   M  + ++ G H    A++   ++V+++G G +GL+ +  
Sbjct: 136 ----------LPKEIPLEAAVMIPDMMTTGFHGAELADIEMGSSVVVIGIGAVGLMGIAG 185
Query: 198 ARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 257
           A+  GA RII        +  A+  GA +          +   V K+ N  G G+D    
Sbjct: 186 AKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HIVDQVMKLTN--GKGVDRVIM 241
Query: 258 CVGFDKTMSTALNATRPGGKVCLI------------------GLAKTEMTVALTPAAARE 299
             G  +T+S A+   +PGG +  I                  G+A   +   L P     
Sbjct: 242 AGGGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGG--- 298
Query: 300 VDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRF-GFTQKEIEDAF 345
                  R R    + + F +  ++D   L+TH F GF    IE AF
Sbjct: 299 -------RLRMERLIDLVFYK--RVDPSKLVTHVFRGFDN--IEKAF 334

>pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium Beijerinckii Alcohol Dehydrogenase Is Critical For Thermostabilization Length = 351

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 121/278 (43%), Gaps = 34/278 (12%)
Query: 20  LLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECA 79
           +LGI  L       P  G  D  VR  A+  C SD+H   T+       +K M++GHE  
Sbjct: 6   MLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIH---TVFEGALGDRKNMILGHEAV 62
Query: 80  GIIEEVGSEVKSLEVGDRV----------ALE-----PGISCGHCSLCKAGSYNLCPEMR 124
           G + EVGSEVK  + GDRV          +LE     P  S G  +  K  ++       
Sbjct: 63  GEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFPQHSNGMLAGWKFSNFKDGVFGE 122
Query: 125 FFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAM-CEPLSVGVHACRRANVGPETNVM 183
           +F     + +LA            LP ++ LE   M  + ++ G H    A++   ++V+
Sbjct: 123 YFHVNDADMNLA-----------ILPKDMPLENAVMITDMMTTGFHGAELADIQMGSSVV 171
Query: 184 IMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK 243
           ++G G +GL+ +  A+  GA RII        +  A+  GA +          +   V K
Sbjct: 172 VIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYKNG--HIVDQVMK 229
Query: 244 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI 281
           + N  G G+D      G  +T+S A++  +PGG +  I
Sbjct: 230 LTN--GKGVDRVIMAGGGSETLSQAVSMVKPGGIISNI 265

>pdb|3FPC|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By E. Histolytica Adh Length = 352

Iteration: 1
 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 133/338 (39%), Gaps = 49/338 (14%)
Query: 34  PTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 93
           P  GP D  VR  A+  C SD+H   T+       +  M++GHE  G + EVGSEVK  +
Sbjct: 20  PAPGPFDAIVRPLAVAPCTSDIH---TVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFK 76
Query: 94  VGDRVALEPGISCGHCSLCKAGSYNLCPEM---------------RFFGSPPTNGSLAHK 138
            GDRV +         S  + G +     M                FF     + +LAH 
Sbjct: 77  PGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAH- 135
Query: 139 VVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLA 197
                     LP  + LE   M  + ++ G H    AN+     V ++G GP+GL+++  
Sbjct: 136 ----------LPKEIPLEAAVMIPDMMTTGFHGAELANIKLGDTVCVIGIGPVGLMSVAG 185
Query: 198 ARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD 257
           A   GA RI           IA   GA  T  ++    D+   + K  +  G G+D    
Sbjct: 186 ANHLGAGRIFAVGSRKHCCDIALEYGA--TDIINYKNGDIVEQILKATD--GKGVDKVVI 241
Query: 258 CVGFDKTMSTALNATRPG---GKVCLIG------LAKTEMTVALTPAAAREVDVIGIFRY 308
             G   T + A+   +PG   G V  +G      + ++E  V +           G    
Sbjct: 242 AGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCPG---G 298
Query: 309 RSTWPLCIEFLRSGKIDVKPLITHRF-GFTQKEIEDAF 345
           R      I+ +   ++D   L+TH F GF    IE AF
Sbjct: 299 RLRMERLIDLVFYKRVDPSKLVTHVFRGFDN--IEKAF 334

>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato Dc3000 Quinone Oxidoreductase Length = 325

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 116/251 (46%), Gaps = 39/251 (15%)
Query: 37  GPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGD 96
           GPQ V VR KA+G+   D ++   +  A F+   P  +G E AG++E VG EV   +VGD
Sbjct: 27  GPQAVVVRNKAIGLNFIDTYYRSGLYPAPFL---PSGLGAEGAGVVEAVGDEVTRFKVGD 83
Query: 97  RVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLE 156
           RVA                          +G+ P  G+ +   V P     KL D+VS E
Sbjct: 84  RVA--------------------------YGTGPL-GAYSEVHVLPEANLVKLADSVSFE 116
Query: 157 EGA--MCEPLSVGVHACRRANVGP-ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV 213
           + A  M + L+V     +   V P E  +    +G +G +    A+A GA ++I T    
Sbjct: 117 QAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSP 175
Query: 214 QRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATR 273
           ++ + A+ LGA ET   S   EDV   V ++ +  G    V +D VG D T  T+L++  
Sbjct: 176 EKAAHAKALGAWETIDYSH--EDVAKRVLELTD--GKKCPVVYDGVGQD-TWLTSLDSVA 230
Query: 274 PGGKVCLIGLA 284
           P G V   G A
Sbjct: 231 PRGLVVSFGNA 241

>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase Length = 333

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 113/253 (44%), Gaps = 38/253 (15%)
Query: 37  GPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGD 96
           GP  V++R  A+G+   D +H   +     + + P+V+G E A ++EEVG  V    VG+
Sbjct: 27  GPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTDFTVGE 86
Query: 97  RVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLE 156
           RV          C+                   P  G+ + + ++PA+   K+P ++ L+
Sbjct: 87  RV----------CTCL-----------------PPLGAYSQERLYPAEKLIKVPKDLDLD 119
Query: 157 E----GAMCEPLSVGVHACRRANVGPETNVMI-MGSGPIGLVTLLAARAFGAPRIIITDV 211
           +    G M + ++      +   V P   V+I   +G +G + +  AR  GA  +I T  
Sbjct: 120 DVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVS 178
Query: 212 DVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNA 271
             ++   AR LG   T   ST  +D    V +I    G G+DV +D +G D T+  +L+ 
Sbjct: 179 TEEKAETARKLGCHHTINYST--QDFAEVVREITG--GKGVDVVYDSIGKD-TLQKSLDC 233
Query: 272 TRPGGKVCLIGLA 284
            RP G     G A
Sbjct: 234 LRPRGMCAAYGHA 246

>pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori Complexed With Nadp(H) Length = 348

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 116/272 (42%), Gaps = 36/272 (13%)
Query: 36  LGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVG 95
           +GP+DV + I   GIC SD+H   +          PM+ GHE AGII+EVG  VK  ++G
Sbjct: 27  VGPRDVLIDILYAGICHSDIHSAYSEWKEGIY---PMIPGHEIAGIIKEVGKGVKKFKIG 83
Query: 96  DRVALEPGI-SCGHCSLCKAGSYNLCPEM--------RFFGSPPTNGSLAHKVVHPAKLC 146
           D V +   + SC  C  CK      C ++         F  + P  G  ++ +V      
Sbjct: 84  DVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYV 143
Query: 147 YKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAP 204
             +  N  LE+ A  +C  ++      + + V   T V + G G +G + +  A A GA 
Sbjct: 144 ISVDKNAPLEKVAPLLCAGITT-YSPLKFSKVTKGTKVGVAGFGGLGSMAVKYAVAMGA- 201
Query: 205 RIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG---SGIDVSFDCVGF 261
                +V V     ARN    + A +S  ++   TD  + +  +    S I   +D   +
Sbjct: 202 -----EVSV----FARNEHKKQDA-LSMGVKHFYTDPKQCKEELDFIISTIPTHYDLKDY 251
Query: 262 DKTMSTALNATRPGGKVCLIGLAKTEMTVALT 293
            K ++         G + L+GL   E+   L+
Sbjct: 252 LKLLTY-------NGDLALVGLPPVEVAPVLS 276

>pdb|1UUF|A Chain A, Crystal Structure Of A Zinc-Type Alcohol Dehydrogenase-Like Protein Yahk Length = 369

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 85/203 (41%), Gaps = 20/203 (9%)
Query: 37  GPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGD 96
           GP DVK+ I   G+C SD+H  ++          P V GHE  G +  VG +V+    GD
Sbjct: 46  GPNDVKIEIAYCGVCHSDLHQVRSEWAGTVY---PCVPGHEIVGRVVAVGDQVEKYAPGD 102
Query: 97  RVALEPGI-SCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHK--------VVHPAKLCY 147
            V +   + SC HC  C+ G  N C  M    + PT     H         VVH     Y
Sbjct: 103 LVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHER---Y 159
Query: 148 KLPDNVSLEEGAMCEPLSVG----VHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGA 203
            L      E+ A   PL           R    GP   V ++G G +G + +  A A GA
Sbjct: 160 VLRIRHPQEQLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGA 219
Query: 204 PRIIITDVDVQRLSIARNLGADE 226
             +  T  + +R   A+ LGADE
Sbjct: 220 HVVAFTTSEAKR-EAAKALGADE 241

>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae Fermentative Enzyme Length = 347

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 113/263 (42%), Gaps = 15/263 (5%)
Query: 27  KIQPYHLPTLGPQ--DVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEE 84
           K++   +P   P+  ++ + +K  G+C +D+H +         VK P+V GHE AG++  
Sbjct: 17  KLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDW--PLPVKLPLVGGHEGAGVVVG 74
Query: 85  VGSEVKSLEVGDRVALEP-GISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPA 143
           +G  VK  ++GD   ++    SC  C  C+ G+ + CP     G    +GS        A
Sbjct: 75  MGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGY-THDGSFQQYATADA 133
Query: 144 KLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMG-SGPIGLVTLLAARA 200
                +P    L + A  +C  ++V   A + AN+     V I G +G +G + +  A+A
Sbjct: 134 VQAAHIPQGTDLAQVAPILCAGITV-YKALKSANLMAGHWVAISGAAGGLGSLAVQYAKA 192
Query: 201 FGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG 260
            G  R++  D    +  + R++G +    V  D       VG +  A   G     +   
Sbjct: 193 MGY-RVLGIDGGEGKEELFRSIGGE----VFIDFTKEKDIVGAVLKATDGGAHGVINVSV 247
Query: 261 FDKTMSTALNATRPGGKVCLIGL 283
            +  +  +    R  G   L+G+
Sbjct: 248 SEAAIEASTRYVRANGTTVLVGM 270

>pdb|1PS0|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Cinnamyl Alcohol Dehydrogenase From Saccharomyces Cerevisiae Length = 360

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 82/314 (26%), Positives = 132/314 (42%), Gaps = 45/314 (14%)
Query: 9   EGDKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVH----HFKTMRCA 64
           EG   Q+   W    K  K   Y        D+ ++I+A G+CGSD+H    H+  M   
Sbjct: 8   EGIAIQSHEDW----KNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNM--- 60
Query: 65  NFIVKKPMVIGHECAGIIEEVGSEVKS-LEVGDRVALEPGI-SCGHCSLCKAGSYNLCPE 122
               K P+V+GHE  G + ++G +  S L+VG RV +   + SC  C  CK  +   C +
Sbjct: 61  ----KMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTK 116
Query: 123 MRFFGSPP------TNGSLAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRA 174
                S P      + G  A+ V         +P+N+     A  +C  L+V      R 
Sbjct: 117 FVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTV-YSPLVRN 175
Query: 175 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDI 234
             GP   V I+G G IG +  L ++A GA   +I+    +R   A  +GAD    ++T +
Sbjct: 176 GCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKRED-AMKMGADHY--IAT-L 231
Query: 235 EDVDTDVGKIQNAMGSGIDVSFDCVGF------DKTMSTALNATRPGGKVCLIGLAKTEM 288
           E+ D          G     +FD +        D   +    A + GG++  I + +   
Sbjct: 232 EEGD---------WGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHE 282
Query: 289 TVALTPAAAREVDV 302
            ++L P   + V +
Sbjct: 283 MLSLKPYGLKAVSI 296

>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane Protein Vat-1 Homolog-Like Protein Length = 349

Iteration: 1
 Score = 57.8 bits (138), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 109/268 (40%), Gaps = 50/268 (18%)
Query: 22  GIKTLKIQPYHLPTLGPQD--VKVRIKALGICGSDVHHFKTMRCANF--IVKKPMVIGHE 77
           G+  L++    +P   PQD  +K+R+KA G+   D+     +R  N     K P+V G E
Sbjct: 14  GLNKLRLFRKAMPE--PQDGELKIRVKACGLNFIDL----MVRQGNIDNPPKTPLVPGFE 67
Query: 78  CAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAH 137
           C+GI+E +G  VK  E+GDRV                        M F        + A 
Sbjct: 68  CSGIVEALGDSVKGYEIGDRV------------------------MAFV----NYNAWAE 99
Query: 138 KVVHPAKLCYKLPDNVSLEEGAM--CEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTL 195
            V  P +  YK+PD++S  E A      ++  V     AN+    +V++  +G  G+   
Sbjct: 100 VVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGG-GVGQA 158
Query: 196 LAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTD-VGKIQNAMGSGIDV 254
           +A      P + +          A     +      T + D + D V +++     G+D+
Sbjct: 159 VAQLCSTVPNVTV-------FGTASTFKHEAIKDSVTHLFDRNADYVQEVKRISAEGVDI 211
Query: 255 SFDCVGFDKTMSTALNATRPGGKVCLIG 282
             DC+  D T    L+  +P G   L G
Sbjct: 212 VLDCLCGDNT-GKGLSLLKPLGTYILYG 238

>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Zeta-Crystallin-Like Quinone Oxidoreductase Zta1 Length = 334

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 107/269 (39%), Gaps = 44/269 (16%)
Query: 22  GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGI 81
           G   +K + Y +P++  +++ ++ K  G+   + +     R   +  +KP V+G E +G 
Sbjct: 19  GYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESY----FRKGIYPCEKPYVLGREASGT 74
Query: 82  IEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVH 141
           +   G  V + EVGD+VA     +    S   +      P M                  
Sbjct: 75  VVAKGKGVTNFEVGDQVAYISNSTFAQYSKISSQG----PVM------------------ 112
Query: 142 PAKLCYKLPDNVSLEE-----GAMCEPLSVGVHACRRANVGPETNVMIMGS-GPIGLVTL 195
                 KLP   S EE       + + L+         +V     V++  + G +GL+  
Sbjct: 113 ------KLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILN 166
Query: 196 LAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 255
              +  GA  I +   D ++L IA+  GA+     S   ED+   V K  N  G G+D S
Sbjct: 167 QLLKMKGAHTIAVASTD-EKLKIAKEYGAEYLINASK--EDILRQVLKFTN--GKGVDAS 221
Query: 256 FDCVGFDKTMSTALNATRPGGKVCLIGLA 284
           FD VG D T   +L A +  G     G A
Sbjct: 222 FDSVGKD-TFEISLAALKRKGVFVSFGNA 249

>pdb|2CF5|A Chain A, Crystal Structures Of The Arabidopsis Cinnamyl Alcohol Dehydrogenases, Atcad5 Length = 357

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 122/274 (44%), Gaps = 24/274 (8%)
Query: 31  YHLPTLGPQDVKVRIKALGICGSDVHHFKT-MRCANFIVKKPMVIGHECAGIIEEVGSEV 89
           Y L   GP+DV +RI   GIC +D+H  K  +  +N+    PMV GHE  G + EVGS+V
Sbjct: 27  YTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNY----PMVPGHEVVGEVVEVGSDV 82
Query: 90  KSLEVGD-RVALEPGISCGHCSLCKAGSYNLCPEM------RFFGSPPTNGSLAHKVVHP 142
               VGD          CG CS C+      CP+        +    PT G  A   V  
Sbjct: 83  SKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVH 142
Query: 143 AKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARA 200
            K   K+P+ +++E+ A  +C  ++V           P     I+G G +G + +  A+A
Sbjct: 143 QKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLRGGILGLGGVGHMGVKIAKA 202
Query: 201 FGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG 260
            G    +I+  + +R    ++LGAD+          + +D  K+ + +   +D   D V 
Sbjct: 203 MGHHVTVISSSNKKREEALQDLGADDYV--------IGSDQAKM-SELADSLDYVIDTVP 253
Query: 261 FDKTMSTALNATRPGGKVCLIGLAKTEMTVALTP 294
               +   L+  +  GK+ L+G+    +   LTP
Sbjct: 254 VHHALEPYLSLLKLDGKLILMGVINNPLQF-LTP 286

>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 363

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 81/322 (25%), Positives = 132/322 (40%), Gaps = 28/322 (8%)
Query: 26  LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEV 85
           LK+    +P  G  D+ VR  A+ +   D    +T    +     P V   + +G++E V
Sbjct: 41  LKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGXGLDLAF--PFVPASDXSGVVEAV 98
Query: 86  GSEVKSLEVGDRV--ALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPA 143
           G  V     GDRV     PG   G     + G+          G+ P  G L+  VV P 
Sbjct: 99  GKSVTRFRPGDRVISTFAPGWLDG----LRPGTGRTPAYETLGGAHP--GVLSEYVVLPE 152
Query: 144 KLCYKLPDNVSLEEGAM--CEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAF 201
                 P ++   E +   C  L+       + ++     V++ G+G + L  L  A+A 
Sbjct: 153 GWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKAT 212
Query: 202 GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTD-VGKIQNAMGS-GIDVSFDCV 259
           GA  +I+T    ++L  A  LGAD        I  ++ D V ++    G  G D   +  
Sbjct: 213 GA-EVIVTSSSREKLDRAFALGADH------GINRLEEDWVERVYALTGDRGADHILEIA 265
Query: 260 GFDKTMSTALNATRPGGKVCLIG-LAKTEMTVALTPAAARE--VDVIGIFRYRSTWPLCI 316
           G    +  +L A  P G++ +IG L   E++  + P   +   V  I +   R+   L  
Sbjct: 266 G-GAGLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGHRRALEDLVG 324
Query: 317 EFLRSGKIDVKPLITHRFGFTQ 338
              R G   +KP+I  R+ FT+
Sbjct: 325 AVDRLG---LKPVIDXRYKFTE 343

>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From Staphylococcus Haemolyticus Length = 346

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 44/204 (21%)
Query: 33  LPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL 92
           +P     ++ V+I+++ +   D       R  + + K P V+G +  G++E VG+EV   
Sbjct: 27  IPEPKVHEILVKIQSISVNPVDTKQ----RLMD-VSKAPRVLGFDAIGVVESVGNEVTMF 81
Query: 93  EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDN 152
             GD V                          + GSP  NGS A   +   +L  K P N
Sbjct: 82  NQGDIV-------------------------YYSGSPDQNGSNAEYQLINERLVAKAPKN 116
Query: 153 VSLEEGAMCEPLS-----------VGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAF 201
           +S E+ A+  PL+            G+   R  N G +T ++I G+G +G +    A+A+
Sbjct: 117 ISAEQ-AVSLPLTGITAYETLFDVFGISRNRNENEG-KTLLIINGAGGVGSIATQIAKAY 174
Query: 202 GAPRIIITDVDVQRLSIARNLGAD 225
           G  R+I T    + +   + +GAD
Sbjct: 175 GL-RVITTASRNETIEWTKKMGAD 197

>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp Length = 351

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 122/283 (43%), Gaps = 49/283 (17%)
Query: 38  PQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVI---GHECAGIIEEVGSEVKSLEV 94
           P+D +V IK +  CG  V+  +T   +    +KP++    G + AG+IE VG    + + 
Sbjct: 55  PKDHQVLIK-VHACG--VNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAFKK 111
Query: 95  GDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVS 154
           GDRV     IS G+     A  + +                           YKLP+ + 
Sbjct: 112 GDRVFTSSTISGGYAEYALAADHTV---------------------------YKLPEKLD 144
Query: 155 LEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDV 211
            ++GA    P      A    A V    +V++ G SG +GL     ARA+G  +I+ T  
Sbjct: 145 FKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAG 203
Query: 212 DVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS-GIDVSFDCVGFDKTMSTALN 270
             +   I    GA E      ++  +D    KI+  +G  GID+  + +  +  +S  L+
Sbjct: 204 TEEGQKIVLQNGAHEVFN-HREVNYID----KIKKYVGEKGIDIIIEMLA-NVNLSKDLS 257
Query: 271 ATRPGGKVCLIGLAKTEMTVALTP--AAAREVDVIGIFRYRST 311
               GG+V ++G   +  T+ + P    A+E  +IG+  + ST
Sbjct: 258 LLSHGGRVIVVG---SRGTIEINPRDTMAKESSIIGVTLFSST 297

>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From Streptomyces Coelicolor A3(2) Length = 456

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 75/294 (25%), Positives = 115/294 (39%), Gaps = 46/294 (15%)
Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHH--FKTMRCANFIVKK----------- 70
           K++ +    +P LGP +  V + A  +  + VH   F+ +    F+ +            
Sbjct: 56  KSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSDLAKRHD 115
Query: 71  --PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYN---LCPEMRF 125
               VIG + AG++   G  V + + GD V       C    L  +  +N   L PE R 
Sbjct: 116 LPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAH----CLSVELESSDGHNDTMLDPEQRI 171
Query: 126 FGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRR------ANVGPE 179
           +G     G LA   +  +      PD++S EE A   P  V   A R+      A +   
Sbjct: 172 WGFETNFGGLAEIALVKSNQLMPKPDHLSWEEAAA--PGLVNSTAYRQLVSRNGAGMKQG 229
Query: 180 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA----DETAKVSTDI 234
            NV+I G SG +G      A A GA  I +     Q+  I R +GA    D  A+     
Sbjct: 230 DNVLIWGASGGLGSYATQFALAGGANPICVVS-SPQKAEICRAMGAEAIIDRNAEGYRFW 288
Query: 235 EDVDTDVGKIQNAM---------GSGIDVSFDCVGFDKTMSTALNATRPGGKVC 279
           +D +T   K              G  ID+ F+  G  +T   ++  TR GG + 
Sbjct: 289 KDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPG-RETFGASVFVTRKGGTIT 341

>pdb|2CD9|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 - Apo Form Length = 366

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 79/200 (39%), Gaps = 26/200 (13%)
Query: 22  GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKP--MVIGHECA 79
           G++   +    L + G   +K+R    GICG+D          + + K    +V+GHE  
Sbjct: 12  GVQVKDVDEKKLDSYGK--IKIRTIYNGICGTDREIVNGKLTLSTLPKGKDFLVLGHEAI 69
Query: 80  GIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRF--FGSPPTNGSLAH 137
           G++EE          GD V       CG C  C  G  + C    F   G    +G +  
Sbjct: 70  GVVEE---SYHGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMRE 126
Query: 138 KVVHPAKLCYKLPDNVSLEEGAMCEPLS---------------VGVHACRRANVGPETNV 182
                 K   K+P ++  + G + +PL+               V V  C    +     V
Sbjct: 127 WWYDDPKYLVKIPKSIE-DIGILAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCR-KV 184
Query: 183 MIMGSGPIGLVTLLAARAFG 202
           +++G+GPIG++  L  R +G
Sbjct: 185 LVVGTGPIGVLFTLLFRTYG 204

>pdb|2CDB|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex With Nadp And Glucose Length = 366

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 79/200 (39%), Gaps = 26/200 (13%)
Query: 22  GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKP--MVIGHECA 79
           G++   +    L + G   +K+R    GICG+D          + + K    +V+GHE  
Sbjct: 12  GVQVKDVDEKKLDSYGK--IKIRTIYNGICGADREIVNGKLTLSTLPKGKDFLVLGHEAI 69
Query: 80  GIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRF--FGSPPTNGSLAH 137
           G++EE          GD V       CG C  C  G  + C    F   G    +G +  
Sbjct: 70  GVVEE---SYHGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMRE 126
Query: 138 KVVHPAKLCYKLPDNVSLEEGAMCEPLS---------------VGVHACRRANVGPETNV 182
                 K   K+P ++  + G + +PL+               V V  C    +     V
Sbjct: 127 WWYDDPKYLVKIPKSIE-DIGILAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCR-KV 184
Query: 183 MIMGSGPIGLVTLLAARAFG 202
           +++G+GPIG++  L  R +G
Sbjct: 185 LVVGTGPIGVLFTLLFRTYG 204

>pdb|3GOH|A Chain A, Crystal Structure Of Alcohol Dehydrogenase Superfamily Protein (np_718042.1) From Shewanella Oneidensis At 1.55 A Resolution Length = 315

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 74/182 (40%), Gaps = 29/182 (15%)
Query: 10  GDKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVK 69
           G +   + A+     ++ +    +P L   D+ V+ +A+GI   D   +K ++       
Sbjct: 1   GXEQHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVD---WKFIKANPINWS 57
Query: 70  KPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP 129
              V G + AG+I +VG++V S  +G RVA        H SL +                
Sbjct: 58  NGHVPGVDGAGVIVKVGAKVDSKXLGRRVAY-------HTSLKR---------------- 94
Query: 130 PTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRRANVGPETNVMIMGSG 188
             +GS A   V        LPDN+S E  A    PL     A  +  +  +  V+I+G G
Sbjct: 95  --HGSFAEFTVLNTDRVXTLPDNLSFERAAALPCPLLTAWQAFEKIPLTKQREVLIVGFG 152
Query: 189 PI 190
            +
Sbjct: 153 AV 154

>pdb|2B5W|A Chain A, Crystal Structure Of D38c Glucose Dehydrogenase Mutant From Haloferax Mediterranei Length = 357

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 109/260 (41%), Gaps = 34/260 (13%)
Query: 43  VRIKALGICGSDVHHFKTMRCANFIV-KKPMVIGHECAGIIEEVGSEVKSLEVGDRVALE 101
           VR   +G+CG+D H         F   +  +V+GHE  G++  V      LE GD V   
Sbjct: 30  VRTLRVGVCGTD-HEVIAGGHGGFPEGEDHLVLGHEAVGVV--VDPNDTELEEGDIVV-- 84
Query: 102 PGI----SCGHCSLCKAGSYNLCPEMRFF--GSPPTNGSLAHKVVHPAKLCYKLPDNVSL 155
           P +    + G     +    ++ P+  +F  G    +G ++     P K   ++P + + 
Sbjct: 85  PTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRIPRSQA- 143
Query: 156 EEGAMCEPLSVG------VHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIIT 209
           E G + EP+S+        +A R A     ++  ++G+G +GL+TL   +        + 
Sbjct: 144 ELGFLIEPISITEKALEHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLK--------VD 195
Query: 210 DVDVQRLS-IARNLGADETAKV-----STDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDK 263
           D   + L  + R    D T  +     +T ++   T V  + +     +D  ++  GF K
Sbjct: 196 DKGYENLYCLGRRDRPDPTIDIIEELDATYVDSRQTPVEDVPDVY-EQMDFIYEATGFPK 254
Query: 264 TMSTALNATRPGGKVCLIGL 283
               ++ A  P G   L+G+
Sbjct: 255 HAIQSVQALAPNGVGALLGV 274

>pdb|2B5V|A Chain A, Crystal Structure Of Glucose Dehydrogenase From Haloferax Mediterranei Length = 357

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 51/230 (22%), Positives = 97/230 (42%), Gaps = 32/230 (13%)
Query: 72  MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGI----SCGHCSLCKAGSYNLCPEMRFF- 126
           +V+GHE  G++  V      LE GD V   P +    + G     +    ++ P+  +F 
Sbjct: 59  LVLGHEAVGVV--VDPNDTELEEGDIVV--PTVRRPPASGTNEYFERDQPDMAPDGMYFE 114
Query: 127 -GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVG------VHACRRANVGPE 179
            G    +G ++     P K   ++P + + E G + EP+S+        +A R A     
Sbjct: 115 RGIVGAHGYMSEFFTSPEKYLVRIPRSQA-ELGFLIEPISITEKALEHAYASRSAFDWDP 173
Query: 180 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADETAKV-----STD 233
           ++  ++G+G +GL+TL   +        + D   + L  + R    D T  +     +T 
Sbjct: 174 SSAFVLGNGSLGLLTLAMLK--------VDDKGYENLYCLGRRDRPDPTIDIIEELDATY 225
Query: 234 IEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGL 283
           ++   T V  + +     +D  ++  GF K    ++ A  P G   L+G+
Sbjct: 226 VDSRQTPVEDVPDVY-EQMDFIYEATGFPKHAIQSVQALAPNGVGALLGV 274

>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From Rhizobium Etli Cfn 42 Length = 353

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 85/351 (24%), Positives = 130/351 (37%), Gaps = 69/351 (19%)
Query: 33  LPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPM--VIGHECAGIIEEVGSEVK 90
           LP  G  +V VR +A+G+   D+      R  ++   K    ++G E +G I  VG  V 
Sbjct: 50  LPVAGEGEVLVRAEAIGVNRPDIAQ----RQGSYPPPKDASPILGLELSGEIVGVGPGVS 105
Query: 91  SLEVGDRVALEPGISCGHCSLCKAGSYN---LCPEMRFFGSPPTNGSLAHKVVHPAKLCY 147
              VGD+V          C L   G+Y    L P  +    P   G  A K     +  +
Sbjct: 106 GYAVGDKV----------CGLANGGAYAEYCLLPAGQIL--PFPKGYDAVKAAALPETFF 153
Query: 148 KLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRII 207
            +  N+  +   + E  SV +H                G+  IG   +  ARAFGA  + 
Sbjct: 154 TVWANL-FQXAGLTEGESVLIHG---------------GTSGIGTTAIQLARAFGA-EVY 196
Query: 208 ITDVDVQRLSIARNLGADETAKV-STDIEDVDTDVGKIQNAMGSGIDVSFDCVG---FDK 263
            T     +      LGA       S D   V      I+   G G+D+  D +G   F++
Sbjct: 197 ATAGSTGKCEACERLGAKRGINYRSEDFAAV------IKAETGQGVDIILDXIGAAYFER 250
Query: 264 TMST----------ALNATRPGGKVCLIGLAKTEMTVALT---PAAAREVDVIGIFRYRS 310
            +++          A        KV L  +    +TV  +   P  A E   I       
Sbjct: 251 NIASLAKDGCLSIIAFLGGAVAEKVNLSPIXVKRLTVTGSTXRPRTAEEKRAIRDDLLSE 310
Query: 311 TWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361
            WPL    L +G   V P+I   F F  +++ DA  +  +G +  KV   +
Sbjct: 311 VWPL----LEAGT--VAPVIHKVFAF--EDVADAHRLLEEGSHVGKVXLTV 353

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	361
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	1e-169
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	1e-166
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	1e-160
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	1e-150
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	1e-149
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	1e-145
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	1e-141
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	1e-124
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	1e-119
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	2e-97
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	1e-86
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	3e-72
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	6e-70
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	2e-66
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	9e-63
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	1e-57
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	1e-55
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	7e-52
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	3e-51
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	4e-51
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	2e-50
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	3e-49
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	2e-48
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	4e-48
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	3e-47
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	3e-45
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	2e-44
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	7e-44
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	5e-43
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	8e-42
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	3e-41
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	5e-35
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	1e-34
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	1e-34
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	2e-34
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	7e-34
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	4e-33
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	4e-30
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	6e-30
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	8e-30
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	9e-30
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	2e-29
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	1e-28
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	1e-28
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	2e-28
3gms_A	340	Putative NADPH:quinone reductase; structural genom	4e-28
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	9e-28
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	9e-28
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	2e-27
4eye_A	342	Probable oxidoreductase; structural genomics, niai	2e-27
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	5e-27
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	2e-25
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	2e-24
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	2e-23
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	3e-23
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	2e-22
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	2e-21
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	2e-20
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	7e-17
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	4e-16
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	4e-09
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	2e-08
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	1e-06
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	4e-06
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	7e-04

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score =  474 bits (1222), Expect = e-169
 Identities = 156/349 (44%), Positives = 224/349 (64%), Gaps = 5/349 (1%)

Query: 12  KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKP 71
           K  N++  + G   L+++ Y +P  GP +V +R+ ++GICGSDVH+++  R  NFIVKKP
Sbjct: 5   KPNNLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKP 64

Query: 72  MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT 131
           MV+GHE +G +E+VGS VK L+ GDRVA+EPG    +   CK G YNL P + F  +PP 
Sbjct: 65  MVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPD 124

Query: 132 NGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIG 191
           +G+L     H A  CYKLPDNV+ EEGA+ EPLSVG+HACRR  V     V++ G+GPIG
Sbjct: 125 DGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIG 184

Query: 192 LVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG 251
           +VTLL A+A GA ++++TD+   RLS A+ +GAD   ++S   E       K++  +G  
Sbjct: 185 MVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISK--ESPQEIARKVEGQLGCK 242

Query: 252 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRST 311
            +V+ +C G + ++   + ATR GG + L+GL     TV L  AA REVD+ G+FRY +T
Sbjct: 243 PEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNT 302

Query: 312 WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 360
           WP+ I  L S  ++VKPL+THRF    ++  +AFE   + G  +K+M  
Sbjct: 303 WPVAISMLASKSVNVKPLVTHRFPL--EKALEAFET-FKKGLGLKIMLK 348

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score =  468 bits (1206), Expect = e-166
 Identities = 158/349 (45%), Positives = 233/349 (66%), Gaps = 4/349 (1%)

Query: 13  NQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPM 72
           + N++A L     L+++   +P     +V +++  +GICGSDVH+++  R A+FIVK PM
Sbjct: 3   SDNLSAVLYKQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPM 62

Query: 73  VIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTN 132
           VIGHE +G + +VG  VK L+ GDRVA+EPG+ C  C  CK G YNLCP++ F  +PP +
Sbjct: 63  VIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDD 122

Query: 133 GSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGL 192
           G+LA   VH A  C+KLPDNVSLEEGA+ EPLSVGVHACRRA V   T V+++G+GPIGL
Sbjct: 123 GNLARYYVHAADFCHKLPDNVSLEEGALLEPLSVGVHACRRAGVQLGTTVLVIGAGPIGL 182

Query: 193 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI 252
           V++LAA+A+GA  ++ T    +RL +A+N GAD T  V    E+  + + +I++A+G   
Sbjct: 183 VSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLP 241

Query: 253 DVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTW 312
           +V+ DC G +K ++  +N TR GG + L+G+    +TV L  A ARE+D+  +FRY + +
Sbjct: 242 NVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYCNDY 301

Query: 313 PLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG-GNAIKVMFN 360
           P+ +E + SG+ +VK L+TH F    ++  DAFE + +   N IKVM +
Sbjct: 302 PIALEMVASGRCNVKQLVTHSFKL--EQTVDAFEAARKKADNTIKVMIS 348

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score =  452 bits (1164), Expect = e-160
 Identities = 126/354 (35%), Positives = 190/354 (53%), Gaps = 12/354 (3%)

Query: 14  QNMAAWLLGIKTLKIQPYHL--------PTLGPQDVKVRIKALGICGSDVHHFKTMRCAN 65
            N+  +      L I               L   +V V +++ GICGSDVH +K      
Sbjct: 8   TNIGVFTNPQHDLWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGP 67

Query: 66  FIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRF 125
            IV+   V+GHE AG +  V   VKS++VGDRVA+EP + C  C  C  G YN C  + F
Sbjct: 68  MIVECDHVLGHESAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDF 127

Query: 126 FGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIM 185
             +PP  G L   V HPA  C+K+ + +S E GAM EPLSV +   +RA V     V+I 
Sbjct: 128 LSTPPVPGLLRRYVNHPAVWCHKIGN-MSYENGAMLEPLSVALAGLQRAGVRLGDPVLIC 186

Query: 186 GSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ 245
           G+GPIGL+T+L A+A GA  ++ITD+D  RL  A+ +  +        +   ++    ++
Sbjct: 187 GAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEICPEVVTHKVERLSAEESAKKIVE 246

Query: 246 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGI 305
           +  G    V+ +C G + +++ A+ A + GGKV +IG+ K E+ +    A+ REVD+   
Sbjct: 247 SFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQIPFMRASVREVDLQFQ 306

Query: 306 FRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG-GNAIKVM 358
           +RY +TWP  I  + +G +D+  L+THRF    ++   AFE ++     AIKV 
Sbjct: 307 YRYCNTWPRAIRLVENGLVDLTRLVTHRFPL--EDALKAFETASDPKTGAIKVQ 358

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score =  426 bits (1097), Expect = e-150
 Identities = 105/347 (30%), Positives = 172/347 (49%), Gaps = 13/347 (3%)

Query: 17  AAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGH 76
            A L   + L +    +P  GP ++ VR++A  ICG+D+H +K    A   ++ P+V GH
Sbjct: 4   LAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGH 63

Query: 77  ECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLA 136
           E +G++E VG  V+  +VGD V+LE  I C  C  C+ G+Y++C   +  G    +G  A
Sbjct: 64  EFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDR-DGGFA 122

Query: 137 HKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLL 196
             VV PA+  +  P ++  E  A+ EP    VH     +     +V+I G+GPIGL+  +
Sbjct: 123 EYVVVPAENAWVNPKDLPFEVAAILEPFGNAVHTVYAGSGVSGKSVLITGAGPIGLMAAM 182

Query: 197 AARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF 256
             RA GA  I+++D +  RL+ AR         +  D+ +V      ++   GSG++V  
Sbjct: 183 VVRASGAGPILVSDPNPYRLAFARPYADRLVNPLEEDLLEV------VRRVTGSGVEVLL 236

Query: 257 DCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAA-AREVDVIGIF--RYRSTWP 313
           +  G +  +   L A  PGG+  ++G+    +   L      R +   GI   R   TW 
Sbjct: 237 EFSGNEAAIHQGLMALIPGGEARILGIPSDPIRFDLAGELVMRGITAFGIAGRRLWQTWM 296

Query: 314 LCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 360
                + SG++D+ PL+THR         +AF +    G A+KV+ +
Sbjct: 297 QGTALVYSGRVDLSPLLTHRLPL--SRYREAFGL-LASGQAVKVILD 340

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score =  425 bits (1094), Expect = e-149
 Identities = 102/366 (27%), Positives = 167/366 (45%), Gaps = 17/366 (4%)

Query: 1   MAEAIRDDEGDKNQNM-----AAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDV 55
              +   D G +N        A  L  +  + ++   +P  GP D+ V+++A GICG+D 
Sbjct: 5   HHHSSGVDLGTENLYFQSMMKAVRLESVGNISVRNVGIPEPGPDDLLVKVEACGICGTDR 64

Query: 56  HHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAG 115
           H         F    P+ +GHE  GI+ E GS V+ +  G R+  +P ISCG C  C+AG
Sbjct: 65  HLLH----GEFPSTPPVTLGHEFCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAG 120

Query: 116 SYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRAN 175
             NLC  +R  G    +G  A  V+ P K  +++P  +    GA CEPL+  +H    + 
Sbjct: 121 RVNLCRNLRAIGIHR-DGGFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCLHGVDLSG 179

Query: 176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIE 235
           +   + V I+G G IGL+T+  AR  GA  +I++     +  +A  +GA  T  V     
Sbjct: 180 IKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATAT--VDPSAG 237

Query: 236 DVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPA 295
           DV   +      +  G+DV  +C G  +T+  +    + GG V ++G+      V + P 
Sbjct: 238 DVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPF 297

Query: 296 AA--REVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGN 353
               RE+ V+G F          + + +G I++  +I+ R      E  D    +     
Sbjct: 298 DILFRELRVLGSFINPFVHRRAADLVATGAIEIDRMISRRISL--DEAPDVIS-NPAAAG 354

Query: 354 AIKVMF 359
            +KV+ 
Sbjct: 355 EVKVLV 360

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score =  414 bits (1067), Expect = e-145
 Identities = 94/353 (26%), Positives = 158/353 (44%), Gaps = 21/353 (5%)

Query: 17  AAWLLGIKTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIG 75
           +        +++    +P +    +V+V+I + G+CGSD+         N     P+ +G
Sbjct: 3   SVVNDTDGIVRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIF----KNGAHYYPITLG 58

Query: 76  HECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSL 135
           HE +G I+ VGS V  L  GD VA  P + C  C  C  G Y+ C +  F GS   +G  
Sbjct: 59  HEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRR-DGGF 117

Query: 136 AHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTL 195
           A  +V   K  + LP ++ +E+GA  EP++VG+HA   A      NV+I+G+G IGL+ +
Sbjct: 118 AEYIVVKRKNVFALPTDMPIEDGAFIEPITVGLHAFHLAQGCENKNVIIIGAGTIGLLAI 177

Query: 196 LAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 255
             A A GA  +   D+  ++L++A++ GA +T   S            +         + 
Sbjct: 178 QCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSE--MSAPQMQSVL--RELRFNQLI 233

Query: 256 FDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAA---REVDVIGIFRYRS-- 310
            +  G  +T+  A+    P  ++ L+G    ++ +          +E+ VIG +   S  
Sbjct: 234 LETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSP 293

Query: 311 ----TWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF 359
                W      L   K+ ++PLI HR  F  +    A    A+     KV+ 
Sbjct: 294 WPGQEWETASRLLTERKLSLEPLIAHRGSF--ESFAQAVRDIARNAMPGKVLL 344

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score =  402 bits (1035), Expect = e-141
 Identities = 109/353 (30%), Positives = 182/353 (51%), Gaps = 13/353 (3%)

Query: 14  QNMAAWLLG--IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKP 71
           + M A +        ++    +P  GP +V +++ A  ICG+D+H ++    A   +K P
Sbjct: 3   EKMVAIMKTKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPP 62

Query: 72  MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT 131
            ++GHE AG + E+G  V+ +EVGD V++E  I CG C  C+ G Y++C   + FG    
Sbjct: 63  QIMGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDT- 121

Query: 132 NGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIG 191
           +G  A   V PA+  +K P ++  E   + EPL   V       +  ++ V+I G+GP+G
Sbjct: 122 DGVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNAVDTVLAGPISGKS-VLITGAGPLG 180

Query: 192 LVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG 251
           L+ +  A+A GA  +I+++    R  +A+ +GAD         EDV  +V  I    G+G
Sbjct: 181 LLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFE--EDVVKEVMDI--TDGNG 236

Query: 252 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAA-AREVDVIGIFRYR- 309
           +DV  +  G  K +   L A  P G+V L+GL   ++T+        + + + GI     
Sbjct: 237 VDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHL 296

Query: 310 -STWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361
             TW      L+SGK+++ P+ITH++     + E+AFE+  + G   KV+F L
Sbjct: 297 WETWYTVSRLLQSGKLNLDPIITHKY-KGFDKYEEAFEL-MRAGKTGKVVFML 347

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score =  360 bits (927), Expect = e-124
 Identities = 69/364 (18%), Positives = 124/364 (34%), Gaps = 38/364 (10%)

Query: 17  AAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGH 76
            A   G     +     P     +  VR   +G+CG+D              +  +V+GH
Sbjct: 4   IAVKRGEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVLGH 63

Query: 77  ECAGIIEEVGSEVKSLEVGDRVALEPG--ISCGHCSLCKAGSYNLCPEMRFFGS--PPTN 132
           E  G++ +       LE GD V        + G     +    ++ P+  +F       +
Sbjct: 64  EAVGVVVDPN--DTELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAH 121

Query: 133 GSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANV------GPETNVMIMG 186
           G ++     P K   ++P + + E G + EP+S+   A   A           ++  ++G
Sbjct: 122 GYMSEFFTSPEKYLVRIPRSQA-ELGFLIEPISITEKALEHAYASRSAFDWDPSSAFVLG 180

Query: 187 SGPIGLVTLLAARAF--GAPRIII---TDVDVQRLSIARNLGADETAKVSTDIEDVDTDV 241
           +G +GL+TL   +    G   +      D     + I   L A       T +EDV    
Sbjct: 181 NGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYVDSRQTPVEDV---- 236

Query: 242 GKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAA----- 296
                 +   +D  ++  GF K    ++ A  P G   L+G+           A      
Sbjct: 237 ----PDVYEQMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAFHREMV 292

Query: 297 AREVDVIGIFRYRS--TWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNA 354
                ++G             + F +  K  ++ L+T     +  E E AF+        
Sbjct: 293 LHNKALVGSVNSHVEHFEAATVTFTKLPKWFLEDLVTGVHPLS--EFEAAFD---DDDTT 347

Query: 355 IKVM 358
           IK  
Sbjct: 348 IKTA 351

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score =  348 bits (896), Expect = e-119
 Identities = 88/376 (23%), Positives = 160/376 (42%), Gaps = 35/376 (9%)

Query: 11  DKNQNMAAWLLGIKTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKTMRCANFIV- 68
            K   + + +     ++++    P +  P ++ +++KA GICGSDVH  +T      +  
Sbjct: 27  GKLTWLGSKVWRYPEVRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYP 86

Query: 69  ---KKPMVIGHECAGIIEEVGSEV------KSLEVGDRVALEPGISCGHCSLCKAGSYNL 119
                P+ +GHE +G++ E G E       K  E+G+ V  E  + CGHC  C  G  N 
Sbjct: 87  GLTGFPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNH 146

Query: 120 CPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPD-------NVSLEEGAMCEPLSVGVHAC- 171
           C  +   G    +G+ A  V   AK  + L +       +     G++ EP SV  +A  
Sbjct: 147 CENLNELGFN-VDGAFAEYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVI 205

Query: 172 -RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKV 230
            R   + P  NV+I+G GPIGL  +   +  GA ++I+++    R ++A+ LGAD     
Sbjct: 206 VRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDP 265

Query: 231 STDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGK-----VCLIGLAK 285
           +   E+    V       G G  +  +  G  + +   +       +     V ++  A 
Sbjct: 266 TK--ENFVEAVLDY--TNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARAD 321

Query: 286 TEMTVALTPAAAREVDVIGIFRY--RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIED 343
            ++ +       R   ++G   +    T+P  I  + SG +D+  +I+       +EI +
Sbjct: 322 AKIPLTGEVFQVRRAQIVGSQGHSGHGTFPRVISLMASG-MDMTKIISKTVSM--EEIPE 378

Query: 344 AFEISAQGGNAIKVMF 359
             +      + +KV  
Sbjct: 379 YIKRLQTDKSLVKVTM 394

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score =  292 bits (750), Expect = 2e-97
 Identities = 65/351 (18%), Positives = 114/351 (32%), Gaps = 42/351 (11%)

Query: 37  GPQDVKVRIKALGICGSDVH--HFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEV 94
               +K+R    GICG+D    + K         K  +V+GHE  G++EE          
Sbjct: 25  SYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDFLVLGHEAIGVVEESYHGFS---Q 81

Query: 95  GDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS--PPTNGSLAHKVVHPAKLCYKLPDN 152
           GD V       CG C  C  G  + C    F  +     +G +        K   K+P +
Sbjct: 82  GDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYDDPKYLVKIPKS 141

Query: 153 VSLEEGAMCEPLSVGVHACRRA--------------NVGPETNVMIMGSGPIGLVTLLAA 198
           +  + G + +PL+    +                         V+++G+GPIG++  L  
Sbjct: 142 IE-DIGILAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLF 200

Query: 199 RAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC 258
           R +G    +    +   +              S++  D   D            DV  D 
Sbjct: 201 RTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVG-------KFDVIIDA 253

Query: 259 VGFDKT-MSTALNATRPGGKVCLIGLAKTE----MTVALTPAAAREVDVIGIFRY-RSTW 312
            G D   +   +      G + L G + +         L         +IG+    +  +
Sbjct: 254 TGADVNILGNVIPLLGRNGVLGLFGFSTSGSVPLDYKTLQEIVHTNKTIIGLVNGQKPHF 313

Query: 313 PLCIEFLRSGKI----DVKPLITHRFGFTQKEIEDAFEISAQG-GNAIKVM 358
              +  L S K       K LIT        + ++  ++  +     IK+ 
Sbjct: 314 QQAVVHLASWKTLYPKAAKMLITKTVSIN--DEKELLKVLREKEHGEIKIR 362

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score =  265 bits (679), Expect = 1e-86
 Identities = 90/356 (25%), Positives = 141/356 (39%), Gaps = 29/356 (8%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
           + L  + + +  +    + V I + G+CGSDVH     R  +  V  P+++GHE AG + 
Sbjct: 28  QPLVYKEFEISDIPRGSILVEILSAGVCGSDVH---MFRGEDPRVPLPIILGHEGAGRVV 84

Query: 84  EVGSEVKS-----LEVGDRVALEPGISCGHCSLCKAG-SYNLCPEMRFFGSPPTNGSLAH 137
           EV  E +      L+ GD +    GI+CG C  CK      LCP  + +G         H
Sbjct: 85  EVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPH 144

Query: 138 K--------VVHPAKLCYKLPDNVSLEEGAMCEP-LSVGVHACRR-ANVGPETNVMIMGS 187
                    V+ P     K+ +   L+  AM     +   HA            V+I G+
Sbjct: 145 LRGCYSSHIVLDPETDVLKVSEKDDLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGA 204

Query: 188 GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS-TDIEDVDTDVGKIQN 246
           GP+GL  ++ AR+ GA  +I+      RL +A  +GAD T     T +E+    +  I  
Sbjct: 205 GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRETSVEERRKAIMDI-- 262

Query: 247 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAR---EVDVI 303
             G G D   +  G  + +       R GG   + G+A  +  V                
Sbjct: 263 THGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFK 322

Query: 304 GIF-RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 358
           GI+    S +   +         +  LITHR      E   A E+  +   A+KV+
Sbjct: 323 GIWVSDTSHFVKTVSITSRNYQLLSKLITHRLPLK--EANKALEL-MESREALKVI 375

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score =  227 bits (581), Expect = 3e-72
 Identities = 91/334 (27%), Positives = 152/334 (45%), Gaps = 23/334 (6%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFK-----TMRCANFIVKKPMVIGHEC 78
           K L +Q   +P      V ++++A G+C SDVH  +          +  VK P+ +GHE 
Sbjct: 11  KPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEI 70

Query: 79  AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHK 138
           AG IEEVG EV     GD VA+ P    G+C  C+ G  +LC   R+ G    +G+ A  
Sbjct: 71  AGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEY 129

Query: 139 VVHPAKLCYKLPDNVSLEEGAMCEPLS-VGV---HACRRANVGPETNVMIMG-SGPIGLV 193
           V+ P          ++  E A   PL+  G+    A R+A++ P   ++++G  G +G +
Sbjct: 130 VIVPHYKYMYKLRRLNAVEAA---PLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTM 186

Query: 194 TLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGID 253
            +  A+A     II  DV  + +  A+  GAD    ++  ++D   ++ +I      G+D
Sbjct: 187 AVQIAKAVSGATIIGVDVREEAVEAAKRAGADYV--INASMQDPLAEIRRITE--SKGVD 242

Query: 254 VSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTW 312
              D    +KT+S    A    GK  ++GL   ++          E+  +G     +S +
Sbjct: 243 AVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDF 302

Query: 313 PLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFE 346
              +    +GK  VKP+IT       +E  +A +
Sbjct: 303 LGIMRLAEAGK--VKPMITKTMKL--EEANEAID 332

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352

 Score =  221 bits (566), Expect = 6e-70
 Identities = 85/345 (24%), Positives = 133/345 (38%), Gaps = 36/345 (10%)

Query: 34  PTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 93
           P  GP D  VR  A+  C SD+H            +  M++GHE  G + EVGSEVK  +
Sbjct: 20  PAPGPFDAIVRPLAVAPCTSDIHTVFEGAIG---ERHNMILGHEAVGEVVEVGSEVKDFK 76

Query: 94  VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTN---GSLAHKV-VHPAKL-CYK 148
            GDRV +         S  + G +     M   G   +N   G       V+ A +    
Sbjct: 77  PGDRVVVPAITPDWRTSEVQRGYHQHSGGM-LAGWKFSNVKDGVFGEFFHVNDADMNLAH 135

Query: 149 LPDNVSLEEGAMC-EPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRII 207
           LP  + LE   M  + ++ G H    AN+     V ++G GP+GL+++  A   GA RI 
Sbjct: 136 LPKEIPLEAAVMIPDMMTTGFHGAELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIF 195

Query: 208 ITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMST 267
                     IA   GA +   ++    D+   + K  +  G G+D      G   T + 
Sbjct: 196 AVGSRKHCCDIALEYGATDI--INYKNGDIVEQILKATD--GKGVDKVVIAGGDVHTFAQ 251

Query: 268 ALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFR------------YRSTWPLC 315
           A+   +PG  +  +        + +           G+               R      
Sbjct: 252 AVKMIKPGSDIGNVNYLGEGDNIDI------PRSEWGVGMGHKHIHGGLCPGGRLRMERL 305

Query: 316 IEFLRSGKIDVKPLITHRF-GFTQKEIEDAFEI-SAQGGNAIKVM 358
           I+ +   ++D   L+TH F GF    IE AF +   +  + IK +
Sbjct: 306 IDLVFYKRVDPSKLVTHVFRGFD--NIEKAFMLMKDKPKDLIKPV 348

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score =  212 bits (542), Expect = 2e-66
 Identities = 84/333 (25%), Positives = 132/333 (39%), Gaps = 23/333 (6%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
               +     PT GP ++ +++ A G+C SD+     M  A +    P+ +GHE  G + 
Sbjct: 11  SEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIF-VMDMPAAQYAYGLPLTLGHEGVGTVA 69

Query: 84  EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPP----TNGSLAHKV 139
           E+G  V    VGD VA+     CG C  C  G  N C      G  P    + GS+A  +
Sbjct: 70  ELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYM 129

Query: 140 VHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRR--ANVGPETNVMIMGSGPIGLVTL 195
           +  +        ++     A      L+   HA  R    +GP +  +++G G +G V +
Sbjct: 130 IVDSARHLVPIGDLDPVAAAPLTDAGLTPY-HAISRVLPLLGPGSTAVVIGVGGLGHVGI 188

Query: 196 LAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM-GSGIDV 254
              RA  A R+I  D+D  RL++AR +GAD   K              I+    G G   
Sbjct: 189 QILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGAGA------ADAIRELTGGQGATA 242

Query: 255 SFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG-IFRYRSTWP 313
            FD VG   T+ TA       G + ++G+                  V+   +  RS   
Sbjct: 243 VFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGFFMIPFGASVVTPYWGTRSELM 302

Query: 314 LCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFE 346
             +   R+G++D   + T  F     E   A+ 
Sbjct: 303 EVVALARAGRLD---IHTETFTLD--EGPAAYR 330

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score =  203 bits (519), Expect = 9e-63
 Identities = 90/332 (27%), Positives = 137/332 (41%), Gaps = 22/332 (6%)

Query: 24  KTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGII 82
           K L+I+    P L G  DV VRI   G+C +D+H  + M       K P  +GHE  G I
Sbjct: 26  KPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYI 85

Query: 83  EEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHP 142
           EEV   V+ LE GD V L P ++ G C  C+AG    C  + F G    +G  A  +   
Sbjct: 86  EEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGL-NIDGGFAEFMRTS 144

Query: 143 AKLCYKLPDNVSLEEGAMCEPLS-VGV---HACRRA--NVGPETNVMIMGSGPIGLVTLL 196
            +   KLP ++S E+     PL+  G+    A ++A   + P   V I+G G +G + + 
Sbjct: 145 HRSVIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQ 204

Query: 197 AARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM-GSGIDVS 255
             +      +I  DV  ++L +A  LGAD       D       V ++     G G++V+
Sbjct: 205 LLKVMTPATVIALDVKEEKLKLAERLGADHVVDARRD------PVKQVMELTRGRGVNVA 258

Query: 256 FDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPL 314
            D VG   T+          G++ ++G    E+        + EV   G           
Sbjct: 259 MDFVGSQATVDYTPYLLGRMGRLIIVGYG-GELRFPTIRVISSEVSFEGSLVGNYVELHE 317

Query: 315 CIEFLRSGKIDVKPLITHRFGFTQKEIEDAFE 346
            +     GK+    +          EI D  E
Sbjct: 318 LVTLALQGKVR---VEVDIHKL--DEINDVLE 344

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score =  189 bits (483), Expect = 1e-57
 Identities = 75/338 (22%), Positives = 139/338 (41%), Gaps = 37/338 (10%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
           + L I+  ++P    ++V +RI   G+C +D+        A    + P+++GHE AG I 
Sbjct: 14  EPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLR-VWKGVEAKQGFRLPIILGHENAGTIV 72

Query: 84  EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPA 143
           EVG E+  ++ GD V +        C  C+ G +N+C      G   TNG  +  ++  +
Sbjct: 73  EVG-ELAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQ-TTNGGFSEYMLVKS 130

Query: 144 KLCYKLPDNVSLEEGAMCEPLSV-GV---HACRRA----NVGPETNVMIMGSGPIGLVTL 195
                  +++S  E A   PL+  G     A R+A    +   E  V++ G G + + T+
Sbjct: 131 SRWLVKLNSLSPVEAA---PLADAGTTSMGAIRQALPFISKFAEPVVIVNGIGGLAVYTI 187

Query: 196 LAARAFGA-PRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV 254
              +A      I+      +    A  LGAD  +    +++D ++ + K+ +  G G  +
Sbjct: 188 QILKALMKNITIVGISRSKKHRDFALELGADYVS----EMKDAESLINKLTD--GLGASI 241

Query: 255 SFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTW-- 312
           + D VG ++T           G + L+G+    +++     A     ++G     S +  
Sbjct: 242 AIDLVGTEETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLG-----SNYGS 296

Query: 313 ----PLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFE 346
                  +    SGKI        +      +I  AF 
Sbjct: 297 LNDLEDVVRLSESGKIKP---YIIKVPLD--DINKAFT 329

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371

 Score =  185 bits (471), Expect = 1e-55
 Identities = 86/365 (23%), Positives = 143/365 (39%), Gaps = 57/365 (15%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
              ++Q   +      +V V++ A G+C +D+     +R   + V  P V+GHE +GIIE
Sbjct: 17  ADFELQALKIRQPQGDEVLVKVVATGMCHTDLI----VRDQKYPVPLPAVLGHEGSGIIE 72

Query: 84  EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMR------------------- 124
            +G  V  L+VGD V L  G  CG C+ C  G+   C E                     
Sbjct: 73  AIGPNVTELQVGDHVVLSYG-YCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHD 131

Query: 125 -------FFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVH-----ACR 172
                  FF       S A   +       K+  +V +E      PL  G+         
Sbjct: 132 QGVVNDHFFAQ----SSFATYALSRENNTVKVTKDVPIELLG---PLGCGIQTGAGACIN 184

Query: 173 RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST 232
              V P ++ +  G+G +GL  LLAA+  GA  II  D+   RL +A+ LGA     +++
Sbjct: 185 ALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHV--INS 242

Query: 233 DIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVAL 292
             +D    V  I+     G++ + +  G  + +   ++A    GK+ ++G  +   T   
Sbjct: 243 KTQDP---VAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQF 299

Query: 293 TPAA--AREVDVIGIF----RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFE 346
                      ++G+       +   P  +   + GK     L+   + F   EI  A  
Sbjct: 300 DVNDLLLGGKTILGVVEGSGSPKKFIPELVRLYQQGKFPFDQLVKF-YAF--DEINQAAI 356

Query: 347 ISAQG 351
            S +G
Sbjct: 357 DSRKG 361

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398

 Score =  176 bits (448), Expect = 7e-52
 Identities = 74/369 (20%), Positives = 131/369 (35%), Gaps = 58/369 (15%)

Query: 38  PQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDR 97
              V +++ +  ICGSD H ++      FIV K  V+GHE  G + E GS+V+ +++GD 
Sbjct: 32  EHAVILKVVSTNICGSDQHIYRGR----FIVPKGHVLGHEITGEVVEKGSDVELMDIGDL 87

Query: 98  VALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT----------NGSLAHKV-VHPAKL- 145
           V++   ++CG C  CK    ++C                     +G  A  V V  A   
Sbjct: 88  VSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYADYM 147

Query: 146 CYKLPDNVSLEEG-----AMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARA 200
             K  D     E       + + L  G H C  A V P ++V I G+GP+G      AR 
Sbjct: 148 LLKFGDKEQAMEKIKDLTLISDILPTGFHGCVSAGVKPGSHVYIAGAGPVGRCAAAGARL 207

Query: 201 FGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG 260
            GA  +I+ D + +RL +  + G         +   +   + +I       +D   D VG
Sbjct: 208 LGAACVIVGDQNPERLKLLSDAGF--ETIDLRNSAPLRDQIDQILG--KPEVDCGVDAVG 263

Query: 261 FD--------------KTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIF 306
           F+                +++  +  R GG + + G+        +   A      +   
Sbjct: 264 FEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIYVGSDPDPVNKDAGSGRLHLDFG 323

Query: 307 RY--------------RSTWPLCIEFLRSGKIDVKP--LITHRFGFTQKEIEDAFEISAQ 350
           +                +      E +   ++      +          +  D +    +
Sbjct: 324 KMWTKSIRIMTGMAPVTNYNRHLTEAILWDQMPYLSKVMNIEVITLD--QAPDGYAKFDK 381

Query: 351 GGNAIKVMF 359
           G    K + 
Sbjct: 382 GS-PAKFVI 389

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398

 Score =  174 bits (443), Expect = 3e-51
 Identities = 79/368 (21%), Positives = 139/368 (37%), Gaps = 57/368 (15%)

Query: 38  PQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDR 97
              V +++ +  ICGSD H  +         +  +V+GHE  G + E G +V++L++GD 
Sbjct: 33  EHGVILKVVSTNICGSDQHMVRGR----TTAQVGLVLGHEITGEVIEKGRDVENLQIGDL 88

Query: 98  VALEPGISCGHCSLCKAGSYNLC------PEMRFFGSP---PTNGSLAHKVVHP-AKL-C 146
           V++   ++CG C  CK     +C           +G        G  A  V+ P A    
Sbjct: 89  VSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNL 148

Query: 147 YKLPDNVSLEEG-----AMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAF 201
            KLPD     E       + + L  G H    A VGP + V + G+GP+GL    +AR  
Sbjct: 149 LKLPDRDKAMEKIRDLTCLSDILPTGYHGAVTAGVGPGSTVYVAGAGPVGLAAAASARLL 208

Query: 202 GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGF 261
           GA  +I+ D++  RL+ A+  G +      +    +   +  +       +D + D VGF
Sbjct: 209 GAAVVIVGDLNPARLAHAKAQGFEIA--DLSLDTPLHEQIAALLG--EPEVDCAVDAVGF 264

Query: 262 D---------------KTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIF 306
           +                 +++ +  TR  GK+ + GL  TE   A+  AA      I   
Sbjct: 265 EARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSLSIRFG 324

Query: 307 RY--------------RSTWPLCIEFLRSGKIDVKPLI-THRFGFTQKEIEDAFEISAQG 351
                                  ++ +   +I++  ++          +    +     G
Sbjct: 325 LGWAKSHSFHTGQTPVMKYNRALMQAIMWDRINIAEVVGVQVISLD--DAPRGYGEFDAG 382

Query: 352 GNAIKVMF 359
               K + 
Sbjct: 383 V-PKKFVI 389

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376

 Score =  173 bits (442), Expect = 4e-51
 Identities = 94/368 (25%), Positives = 155/368 (42%), Gaps = 48/368 (13%)

Query: 18  AWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHE 77
           AW  G   L I+   +      +V++++ A  +C +D++     + A F    P+V+GHE
Sbjct: 14  AWKTG-SPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKALF----PVVLGHE 68

Query: 78  CAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLA- 136
           CAGI+E VG  V + + GD+V       C  C LC +   NLC ++R F  P  +  L  
Sbjct: 69  CAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELME 128

Query: 137 ------------------------HKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVH--- 169
                                   + VV  A L  ++ D  +LE       +  G     
Sbjct: 129 DRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLA-RVDDEANLERVC---LIGCGFSSGY 184

Query: 170 --ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET 227
             A   A V P +   + G G +GL  ++  +  GA RII  D++ ++   A+ LGA + 
Sbjct: 185 GAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDC 244

Query: 228 AKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKT 286
                  + V      I      G+D S DC G  +T+  A++ T  G G   ++G    
Sbjct: 245 LNPRELDKPV---QDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVD 301

Query: 287 EMTVALTP-AAAREV--DVIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIED 343
           EMT+        R +     G ++   + P  +   ++ K D+  L+TH   F  + I D
Sbjct: 302 EMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPF--ESIND 359

Query: 344 AFEISAQG 351
           A ++  +G
Sbjct: 360 AIDLMKEG 367

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373

 Score =  171 bits (437), Expect = 2e-50
 Identities = 89/349 (25%), Positives = 142/349 (40%), Gaps = 44/349 (12%)

Query: 37  GPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGD 96
              +V+++I A  +C +D +   T+  A+     P+++GH  AGI+E VG  V  L+ GD
Sbjct: 30  KAHEVRIKIIATAVCHTDAY---TLSGADPEGCFPVILGHLGAGIVESVGEGVTKLKAGD 86

Query: 97  RVALEPGISCGHCSLCKAGSYNLCPEMRFF---GSPPTNGS--------LAH-------- 137
            V       CG C  C     NLC ++R     G  P   S        + H        
Sbjct: 87  TVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFS 146

Query: 138 --KVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVH-----ACRRANVGPETNVMIMGSGPI 190
              VV    +  K+     L++  +   L  G+      A   A + P +   + G G +
Sbjct: 147 EYTVVADISVA-KIDPLAPLDKVCL---LGCGISTGYGAAVNTAKLEPGSVCAVFGLGGV 202

Query: 191 GLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS 250
           GL  ++  +  GA RII  D++  + + A+  GA E        + +      +      
Sbjct: 203 GLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPI---QEVLIEMTDG 259

Query: 251 GIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTPA---AAREVD--VIG 304
           G+D SF+C+G  K M  AL A   G G   ++G+A +   +A  P      R       G
Sbjct: 260 GVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFG 319

Query: 305 IFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGN 353
            ++   + P  +    S KI V   +TH   F   EI  AFE+   G +
Sbjct: 320 GWKSVESVPKLVSEYMSKKIKVDEFVTHNLSF--DEINKAFELMHSGKS 366

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374

 Score =  168 bits (428), Expect = 3e-49
 Identities = 84/368 (22%), Positives = 146/368 (39%), Gaps = 46/368 (12%)

Query: 18  AWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHE 77
            W    K   I+   +      +V++++ A GIC SD H              P++ GHE
Sbjct: 14  LWEEK-KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTPL----PVIAGHE 68

Query: 78  CAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF---GSPPTNGS 134
            AGI+E +G  V ++  GD+V       CG C +CK    N C +       G+     S
Sbjct: 69  AAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTS 128

Query: 135 --------LAH----------KVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVH-----AC 171
                   + H           VV    +  K+     LE+  +   +  G       A 
Sbjct: 129 RFTCRGKPIHHFLGTSTFSQYTVVDEISVA-KIDAASPLEKVCL---IGCGFSTGYGSAV 184

Query: 172 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS 231
           + A V   +   + G G +GL  ++  +A GA RII  D++  + + A+ +GA E     
Sbjct: 185 KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ 244

Query: 232 TDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTV 290
              + +      +      G+D SF+ +G   TM TAL+  +   G   ++G+      +
Sbjct: 245 DYKKPI---QEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNL 301

Query: 291 ALTPAAAREVDVI-----GIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAF 345
           ++ P              G F+ + + P  +    + K  + PLITH   F  ++I + F
Sbjct: 302 SMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGF 359

Query: 346 EISAQGGN 353
           ++   G +
Sbjct: 360 DLLRSGES 367

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373

 Score =  166 bits (422), Expect = 2e-48
 Identities = 84/365 (23%), Positives = 142/365 (38%), Gaps = 46/365 (12%)

Query: 18  AWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHE 77
           AW    K L ++   +      +V+++I A GICGSD    K +  + F    P+++GHE
Sbjct: 15  AWEPH-KPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPSKF----PVILGHE 69

Query: 78  CAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF---GSPPTNGS 134
             G++E +G+ V  ++ GD+V       CG C  CK+ + N C +       G      S
Sbjct: 70  AVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTS 129

Query: 135 --------LAH---------KVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHAC-RRANV 176
                   + +           V       K+     LE   +    + G  A    A V
Sbjct: 130 RFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLESCLIGCGFATGYGAAVNTAKV 189

Query: 177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIED 236
            P +   + G G +G   ++  +A GA RII       +   A  LGA E        + 
Sbjct: 190 TPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKP 249

Query: 237 VDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTPA 295
           +      I      G+D + +C G  +TM  AL +T  G G   ++GLA     + L P 
Sbjct: 250 I---YEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDP- 305

Query: 296 AAREVDVIGIFRYRSTW---------PLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFE 346
               + ++     + +             ++     KI+V  L++ +      +I  AFE
Sbjct: 306 ----LLLLTGRSLKGSVFGGFKGEEVSRLVDDYMKKKINVNFLVSTKLTL--DQINKAFE 359

Query: 347 ISAQG 351
           + + G
Sbjct: 360 LLSSG 364

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score =  164 bits (418), Expect = 4e-48
 Identities = 95/341 (27%), Positives = 155/341 (45%), Gaps = 24/341 (7%)

Query: 16  MAAWLL----GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKP 71
           M A ++    G + L++    +P  GP++V+VR+KA  +   DV   K +  A+  +  P
Sbjct: 1   MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGV--ASPKLPLP 58

Query: 72  MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT 131
            V+G + +G+++ VG  V+    GD V + PG+SCG C  C AG  NLCP  +  G    
Sbjct: 59  HVLGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHR- 117

Query: 132 NGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGV--HA-CRRANVGPETNVMIMG-S 187
           +G+ A  VV P       P N+S EE A   PL+          +  V P  +V++M   
Sbjct: 118 HGTYAEYVVLPEANLAPKPKNLSFEEAA-AIPLTFLTAWQMVVDKLGVRPGDDVLVMAAG 176

Query: 188 GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA 247
             + +  +  A+ FGA R+I T     +L  A+ LGADET  V+    D   +V ++   
Sbjct: 177 SGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKALGADET--VNYTHPDWPKEVRRLTG- 232

Query: 248 MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG-LAKTEMTVALTPAAAREVDVIGIF 306
            G G D   D  G        + AT  GG++ + G  +  E T+       R++ ++G  
Sbjct: 233 -GKGADKVVDHTGAL-YFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGST 290

Query: 307 -RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFE 346
              +S     + F+  GK+  KP++            +   
Sbjct: 291 MASKSRLFPILRFVEEGKL--KPVVGQVLPLE--AAAEGHR 327

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374

 Score =  163 bits (415), Expect = 3e-47
 Identities = 85/366 (23%), Positives = 142/366 (38%), Gaps = 46/366 (12%)

Query: 18  AWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHE 77
           AW    K L I+   +      +++++I A G+C +D++H             P+V+GHE
Sbjct: 14  AWEAN-KPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFE---GKHKDGFPVVLGHE 69

Query: 78  CAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF---GSPPTNGS 134
            AGI+E VG  V   + G++V       CG C  C++   N C +              +
Sbjct: 70  GAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKET 129

Query: 135 --------LAH----------KVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVH-----AC 171
                   +             VV+   +  K+  +  L+   +   L  GV      A 
Sbjct: 130 RFTCKGRKVLQFLGTSTFSQYTVVNQIAVA-KIDPSAPLDTVCL---LGCGVSTGFGAAV 185

Query: 172 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS 231
             A V P +   + G G +GL  ++   + GA RII  D++  +   A+  GA +    +
Sbjct: 186 NTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPN 245

Query: 232 TDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTV 290
              E +      +      G+D S +CVG    M  AL +   G G   L+G       V
Sbjct: 246 DHSEPI---SQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLH-DV 301

Query: 291 ALTPA---AAREVD--VIGIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAF 345
           A  P    A R     + G F+ +   P  ++     K+ +   ITHR     + + DA 
Sbjct: 302 ATRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPL--ESVNDAI 359

Query: 346 EISAQG 351
           ++   G
Sbjct: 360 DLMKHG 365

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score =  158 bits (401), Expect = 3e-45
 Identities = 79/342 (23%), Positives = 126/342 (36%), Gaps = 27/342 (7%)

Query: 14  QNMAAWLL---GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKK 70
           + M  W         LK+    +P  G  D+ VR  A+ +   D             +  
Sbjct: 26  KWMQEWSTETVAPHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDK--LVLETGMGLDLAF 83

Query: 71  PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPP 130
           P V   + +G++E VG  V     GDRV                G     P     G   
Sbjct: 84  PFVPASDMSGVVEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTG---RTPAYETLGG-A 139

Query: 131 TNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGV---HA-CRRANVGPETNVMIMG 186
             G L+  VV P       P ++   E +   P   G+    A   + ++     V++ G
Sbjct: 140 HPGVLSEYVVLPEGWFVAAPKSLDAAEAS-TLPC-AGLTAWFALVEKGHLRAGDRVVVQG 197

Query: 187 SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 246
           +G + L  L  A+A GA  +I+T    ++L  A  LGAD         ED    V  +  
Sbjct: 198 TGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFALGADHGINRLE--EDWVERVYALTG 254

Query: 247 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG-LAKTEMTVALTPAAAREVDVIGI 305
               G D   +  G    +  +L A  P G++ +IG L   E++  + P   +   V GI
Sbjct: 255 --DRGADHILEIAGGA-GLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGI 311

Query: 306 F-RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFE 346
              +R      +  +    +  KP+I  R+ FT  E+ +A  
Sbjct: 312 SVGHRRALEDLVGAVDRLGL--KPVIDMRYKFT--EVPEALA 349

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score =  154 bits (392), Expect = 2e-44
 Identities = 84/297 (28%), Positives = 122/297 (41%), Gaps = 40/297 (13%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVH------HFKTMRCANFIVKKPMVIGHE 77
             L I    +P  GP  V+V+I+A G+C +D+H        K           P + GHE
Sbjct: 13  APLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKP--------TLPFIPGHE 64

Query: 78  CAGIIEEVGSEVKSLEVGDRVALEPGI-----SCGHCSLCKAGSYNLCPEMRFFGSPPTN 132
             G +  VGS V  ++ GDRV    G+     +CG+C  C  G   LC + +  G    N
Sbjct: 65  GVGYVSAVGSGVSRVKEGDRV----GVPWLYSACGYCEHCLQGWETLCEKQQNTGY-SVN 119

Query: 133 GSLAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGV---HACRRANVGPETNVMIMGS 187
           G     VV        LPD V   E A  +C     GV      +  +  P   V+I G 
Sbjct: 120 GGYGEYVVADPNYVGLLPDKVGFVEIAPILC----AGVTVYKGLKVTDTRPGQWVVISGI 175

Query: 188 GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA 247
           G +G V +  ARA G  R+   D+D  +L++AR LGA+    V+    D       +Q  
Sbjct: 176 GGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGAEVA--VNARDTDP---AAWLQKE 229

Query: 248 MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG 304
           +G G           K  S A+   R GG + L GL   +    +     + + + G
Sbjct: 230 IG-GAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRG 285

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score =  153 bits (389), Expect = 7e-44
 Identities = 91/292 (31%), Positives = 130/292 (44%), Gaps = 30/292 (10%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCA-NFIVKKPMVIGHECAGII 82
           + LKI+    PT+   +V VRIKA G+C +D+H             K P++ GHE  GI+
Sbjct: 11  EPLKIKEVEKPTISYGEVLVRIKACGVCHTDLH---AAHGDWPVKPKLPLIPGHEGVGIV 67

Query: 83  EEVGSEVKSLEVGDRVALEPGI-----SCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAH 137
           EEVG  V  L+VGDRV    GI     +CGHC  C +G   LC   +  G    +G  A 
Sbjct: 68  EEVGPGVTHLKVGDRV----GIPWLYSACGHCDYCLSGQETLCEHQKNAGY-SVDGGYAE 122

Query: 138 KVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGV---HACRRANVGPETNVMIMGSGPIGL 192
                A    K+PDN+S EE A   C     GV    A +     P   V I G G +G 
Sbjct: 123 YCRAAADYVVKIPDNLSFEEAAPIFC----AGVTTYKALKVTGAKPGEWVAIYGIGGLGH 178

Query: 193 VTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI 252
           V +  A+A G   ++  D+  ++L +A+ LGAD        +  +  D  K       G+
Sbjct: 179 VAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLV------VNPLKEDAAKFMKEKVGGV 231

Query: 253 DVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIG 304
             +           +A N+ R GG   L+GL   EM + +       + +IG
Sbjct: 232 HAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIG 283

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score =  153 bits (389), Expect = 5e-43
 Identities = 70/367 (19%), Positives = 118/367 (32%), Gaps = 44/367 (11%)

Query: 22  GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDV---------------HHFKTMRCANF 66
             K+L++    +P L P +V V + A  I  + V                + +    A  
Sbjct: 46  VRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWATR 105

Query: 67  IVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF 126
             +   V+G +C+G++   G  V+  + GD V + P            G   L  E R +
Sbjct: 106 HDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAH-VDEQEPATHGDGMLGTEQRAW 164

Query: 127 GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVG-----VHACRRANVGPETN 181
           G     G LA   V  A      P +++ EE A   PL  G     + + R A +     
Sbjct: 165 GFETNFGGLAEYGVVRASQLLPKPAHLTWEEAA-VSPLCAGTAYRMLVSDRGAQMKQGDI 223

Query: 182 VMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET------------- 227
           V+I G SG +G   +   +  G    +      Q+ +  R LG D               
Sbjct: 224 VLIWGASGGLGSYAIQFVKNGGG-IPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIA 282

Query: 228 AKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG-LAKT 286
                 +E        +    G   D+ F+  G   T   ++   R GG V   G  +  
Sbjct: 283 DDPRRVVETGRKLAKLVVEKAGREPDIVFEHTG-RVTFGLSVIVARRGGTVVTCGSSSGY 341

Query: 287 EMTVALTPAAAREVDVIGIFR-YRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAF 345
             T        +   ++G                 SG +   P ++  +     E  +A 
Sbjct: 342 LHTFDNRYLWMKLKKIVGSHGANHEEQQATNRLFESGAV--VPAMSAVYPL--AEAAEAC 397

Query: 346 EISAQGG 352
            +     
Sbjct: 398 RVVQTSR 404

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score =  148 bits (376), Expect = 8e-42
 Identities = 65/277 (23%), Positives = 109/277 (39%), Gaps = 39/277 (14%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCAN---FIVKKPMVIGHECAG 80
             L+ +   +P     ++ + +K  G+C +D+H              VK P+V GHE AG
Sbjct: 16  GKLEYKDIPVPKPKANELLINVKYSGVCHTDLH---AWH--GDWPLPVKLPLVGGHEGAG 70

Query: 81  IIEEVGSEVKSLEVGDRVALEPGI-----SCGHCSLCKAGSYNLCPEMRFFGSPPTNGSL 135
           ++  +G  VK  ++GD      GI     SC  C  C+ G+ + CP     G    +GS 
Sbjct: 71  VVVGMGENVKGWKIGDYA----GIKWLNGSCMACEYCELGNESNCPHADLSGY-THDGSF 125

Query: 136 AHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGV---HACRRANVGPETNVMIMGSGPI 190
                  A     +P    L + A  +C     G+    A + AN+     V I G+   
Sbjct: 126 QQYATADAVQAAHIPQGTDLAQVAPILC----AGITVYKALKSANLMAGHWVAISGAAG- 180

Query: 191 GL----VTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN 246
           GL    V    A+A G  R++  D    +  + R++G +      T  +D+   VG +  
Sbjct: 181 GLGSLAVQY--AKAMGY-RVLGIDGGEGKEELFRSIGGEVFI-DFTKEKDI---VGAVLK 233

Query: 247 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGL 283
           A   G     +    +  +  +    R  G   L+G+
Sbjct: 234 ATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGM 270

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score =  149 bits (378), Expect = 3e-41
 Identities = 76/376 (20%), Positives = 124/376 (32%), Gaps = 49/376 (13%)

Query: 12  KNQNMAAWLL-----GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDV----------- 55
               M A L        K++ +    +P LGP +  V + A  +  + V           
Sbjct: 39  DETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTF 98

Query: 56  -HHFKTMRCANFIVKKPM---VIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSL 111
               +  R ++   +  +   VIG + AG++   G  V + + GD V           S 
Sbjct: 99  GFLERYGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSD 158

Query: 112 CKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVG---- 167
                  L PE R +G     G LA   +  +      PD++S EE A    L       
Sbjct: 159 G-HNDTMLDPEQRIWGFETNFGGLAEIALVKSNQLMPKPDHLSWEEAA-APGLVNSTAYR 216

Query: 168 -VHACRRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD 225
            + +   A +    NV+I G SG +G      A A GA   I      Q+  I R +GA+
Sbjct: 217 QLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGA-NPICVVSSPQKAEICRAMGAE 275

Query: 226 ET-----------AKVSTDIEDVDTDVGKIQNAM--GSGIDVSFDCVGFDKTMSTALNAT 272
                           +T         GK    +  G  ID+ F+  G  +T   ++  T
Sbjct: 276 AIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPG-RETFGASVFVT 334

Query: 273 RPGGKVCLIG-LAKTEMTVALTPAAAREVDVIGI-FRYRSTWPLCIEFLRSGKIDVKPLI 330
           R GG +      +                 +IG  F            +  G+I   P +
Sbjct: 335 RKGGTITTCASTSGYMHEYDNRYLWMSLKRIIGSHFANYREAWEANRLIAKGRI--HPTL 392

Query: 331 THRFGFTQKEIEDAFE 346
           +  +    ++   A  
Sbjct: 393 SKVYSL--EDTGQAAY 406

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360

 Score =  130 bits (329), Expect = 5e-35
 Identities = 71/295 (24%), Positives = 117/295 (39%), Gaps = 45/295 (15%)

Query: 22  GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGI 81
             K  K   Y        D+ ++I+A G+CGSD+H           +K P+V+GHE  G 
Sbjct: 17  DWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIH---CAAGHWGNMKMPLVVGHEIVGK 73

Query: 82  IEEVGSEVKS-LEVGDRVALEPGI-----SCGHCSLCKAGSYNLCPEMRF-FGSPPTNGS 134
           + ++G +  S L+VG RV    G+     SC  C  CK  +   C +    +  P  +G 
Sbjct: 74  VVKLGPKSNSGLKVGQRV----GVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGY 129

Query: 135 L-----AHKVVHPAKLCYKLPDNVSLEEGA--MC------EPLSVGVHACRRANVGPETN 181
           +     A+ V         +P+N+     A  +C       PL        R   GP   
Sbjct: 130 VSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTVYSPL-------VRNGCGPGKK 182

Query: 182 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDV 241
           V I+G G IG +  L ++A GA   +I+    +R   A  +GAD     + +  D     
Sbjct: 183 VGIVGLGGIGSMGTLISKAMGAETYVISRSSRKR-EDAMKMGADHYI-ATLEEGD----- 235

Query: 242 GKIQNAMGSGIDVSFDCVGFDKTMSTA--LNATRPGGKVCLIGLAKTEMTVALTP 294
              +    +  D+   C      +       A + GG++  I + +    ++L P
Sbjct: 236 -WGEKYFDT-FDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHEMLSLKP 288

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score =  129 bits (327), Expect = 1e-34
 Identities = 59/358 (16%), Positives = 133/358 (37%), Gaps = 60/358 (16%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPM--VIGHECAGI 81
           K ++++   L  +   DV+V++ A  I  SD++    M   N+ +   +  V G+E    
Sbjct: 40  KVVELKNLELAAVRGSDVRVKMLAAPINPSDIN----MIQGNYGLLPELPAVGGNEGVAQ 95

Query: 82  IEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVH 141
           +  VGS V  L+ GD V                             +    G+   + V 
Sbjct: 96  VVAVGSNVTGLKPGDWVI---------------------------PANAGLGTWRTEAVF 128

Query: 142 PAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMG-SGPIGLVTLLAA 198
             +   ++P ++ L+  A     P +          + P  +V+    +  +G   +  A
Sbjct: 129 SEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIA 188

Query: 199 RAFGAPRIII--TDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 255
            A G   I +     D+Q+LS   ++LGA+    ++ +           ++       ++
Sbjct: 189 AALGLRTINVVRDRPDIQKLSDRLKSLGAEHV--ITEEELRRPEMKNFFKD--MPQPRLA 244

Query: 256 FDCVGFDKTMSTALNATRPGGKVCLIG-LAKTEMTVALTPAAAREVDVIGIF-------- 306
            +CVG  K+ +  L     GG +   G +AK  +  +++    +++ + G +        
Sbjct: 245 LNCVG-GKSSTELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDH 303

Query: 307 ---RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL 361
              +++       + +R G++        +     ++ + A E S +   + K +  +
Sbjct: 304 SPDQFKELILTLCDLIRRGQL--TAPACSQVPL--QDYQSALEASMKPFISSKQILTM 357

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366

 Score =  129 bits (327), Expect = 1e-34
 Identities = 71/268 (26%), Positives = 121/268 (45%), Gaps = 43/268 (16%)

Query: 36  LGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVG 95
            G +DV+ ++   G+C SD+H   +++        P+V GHE  G + EVGS+VK + VG
Sbjct: 39  TGEEDVRFKVLYCGVCHSDLH---SIKNDWGFSMYPLVPGHEIVGEVTEVGSKVKKVNVG 95

Query: 96  DRVALEPGI-----SCGHCSLCKAGSYNLCPEMRF-FGSPPTNGSLAH-----KVVHPAK 144
           D+V    G+     +C  C  C     N CP+M   + S   +G++ +      +V   +
Sbjct: 96  DKV----GVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANER 151

Query: 145 LCYKLPDNVSLEEGA--MC------EPLSVGVHACRRANVG-PETNVMIMGSGPIGLVTL 195
              + PDN+ L+ GA  +C       PL       +   +  P  ++ I+G G +G V +
Sbjct: 152 YIIRFPDNMPLDGGAPLLCAGITVYSPL-------KYFGLDEPGKHIGIVGLGGLGHVAV 204

Query: 196 LAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 255
             A+AFG+   +I+    ++    +N GAD           V  D  ++Q A G+ +D  
Sbjct: 205 KFAKAFGSKVTVISTSPSKKEEALKNFGADSFL--------VSRDQEQMQAAAGT-LDGI 255

Query: 256 FDCVGFDKTMSTALNATRPGGKVCLIGL 283
            D V     +       +  GK+ L+G 
Sbjct: 256 IDTVSAVHPLLPLFGLLKSHGKLILVGA 283

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348

 Score =  128 bits (324), Expect = 2e-34
 Identities = 68/292 (23%), Positives = 107/292 (36%), Gaps = 50/292 (17%)

Query: 26  LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEV 85
            K   +    +GP+DV + I   GIC SD+H   +          PM+ GHE AGII+EV
Sbjct: 17  FKPHDFSRHAVGPRDVLIDILYAGICHSDIH---SAYSEWKEGIYPMIPGHEIAGIIKEV 73

Query: 86  GSEVKSLEVGDRVALEPGI-----SCGHCSLCKAGSYNLCPEM--------RFFGSPPTN 132
           G  VK  ++GD V    G+     SC  C  CK      C ++         F  + P  
Sbjct: 74  GKGVKKFKIGDVV----GVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHM 129

Query: 133 GSLAHKVVHPAKLCYKLPDNVSLEEGA--MC------EPLSVGVHACRRANVGPETNVMI 184
           G  ++ +V        +  N  LE+ A  +C       PL       + + V   T V +
Sbjct: 130 GGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITTYSPL-------KFSKVTKGTKVGV 182

Query: 185 MGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI 244
            G G +G + +  A A GA   +    + ++   A ++G              D      
Sbjct: 183 AGFGGLGSMAVKYAVAMGAEVSVFARNEHKK-QDALSMGVKHFY--------TDPK---- 229

Query: 245 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAA 296
                  +D     +     +   L      G + L+GL   E+   L+   
Sbjct: 230 --QCKEELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFD 279

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357

 Score =  127 bits (321), Expect = 7e-34
 Identities = 73/273 (26%), Positives = 116/273 (42%), Gaps = 43/273 (15%)

Query: 31  YHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVK 90
           Y L   GP+DV +RI   GIC +D+H     +    +   PMV GHE  G + EVGS+V 
Sbjct: 27  YTLRETGPEDVNIRIICCGICHTDLH---QTKNDLGMSNYPMVPGHEVVGEVVEVGSDVS 83

Query: 91  SLEVGDRVALEPGI-----SCGHCSLCKAGSYNLCPEMRF-FGSPPTNGSLAH-----KV 139
              VGD V    G+      CG CS C+      CP+  + +     NG           
Sbjct: 84  KFTVGDIV----GVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKAT 139

Query: 140 VHPAKLCYKLPDNVSLEEGA--MC------EPLSVGVHACRRANVG-PETNVMIMGSGPI 190
           V   K   K+P+ +++E+ A  +C       PL           +  P     I+G G +
Sbjct: 140 VVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPL-------SHFGLKQPGLRGGILGLGGV 192

Query: 191 GLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS 250
           G + +  A+A G    +I+  + +R    ++LGAD+          + +D  K+     S
Sbjct: 193 GHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYV--------IGSDQAKMSELADS 244

Query: 251 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGL 283
            +D   D V     +   L+  +  GK+ L+G+
Sbjct: 245 -LDYVIDTVPVHHALEPYLSLLKLDGKLILMGV 276

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369

 Score =  125 bits (317), Expect = 4e-33
 Identities = 67/279 (24%), Positives = 103/279 (36%), Gaps = 45/279 (16%)

Query: 26  LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEV 85
           L+         GP DVK+ I   G+C SD+H    +R        P V GHE  G +  V
Sbjct: 35  LEPMDITRREPGPNDVKIEIAYCGVCHSDLH---QVRSEWAGTVYPCVPGHEIVGRVVAV 91

Query: 86  GSEVKSLEVGDRVALEPGI-----SCGHCSLCKAGSYNLCPEMRF-------FGSPPTNG 133
           G +V+    GD V    G+     SC HC  C+ G  N C  M              T G
Sbjct: 92  GDQVEKYAPGDLV----GVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLG 147

Query: 134 SLAHKVVHPAKLCYKLPDNVSLEEGA---MC------EPLSVGVHACRRANVGPETNVMI 184
             + ++V   +   ++             +C       PL       R    GP   V +
Sbjct: 148 GYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPL-------RHWQAGPGKKVGV 200

Query: 185 MGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI 244
           +G G +G + +  A A GA  +  T  + +R   A+ LGADE    S + ++       +
Sbjct: 201 VGIGGLGHMGIKLAHAMGAHVVAFTTSEAKR-EAAKALGADEVV-NSRNADE-------M 251

Query: 245 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGL 283
              + S  D   + V     +       +  G + L+G 
Sbjct: 252 AAHLKS-FDFILNTVAAPHNLDDFTTLLKRDGTMTLVGA 289

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score =  117 bits (294), Expect = 4e-30
 Identities = 51/376 (13%), Positives = 106/376 (28%), Gaps = 74/376 (19%)

Query: 25  TLKIQPYHLPTLGPQDVKVRIKALGICGSDVH-------HFKTMRCANFIVKKPMVIGHE 77
             +        L P +V V+     +  SD++                   +     G+E
Sbjct: 20  FTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNE 79

Query: 78  CAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAH 137
               + +VGS V SLE GD V                             S    G+   
Sbjct: 80  GLFEVIKVGSNVSSLEAGDWVI---------------------------PSHVNFGTWRT 112

Query: 138 KVVHPAKLCYKL-----------PDNVSLEEGAMCEPLSVGV----HAC-RRANVGPETN 181
             +       KL           P+ +++ +GA    +SV              + P  +
Sbjct: 113 HALGNDDDFIKLPNPAQSKANGKPNGLTINQGAT---ISVNPLTAYLMLTHYVKLTPGKD 169

Query: 182 VMIM--GSGPIGLVTLLAARAFGAPRIIIT---DVDVQRLSIARNLGADETAKVST-DIE 235
             I   G+  +G       +      I +        + ++  + LGA +       +  
Sbjct: 170 WFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSR 229

Query: 236 DVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG-LAKTEMTVALTP 294
           +    + +     G    ++ +CVG  K+ +         G +   G ++   +T+  + 
Sbjct: 230 EFGPTIKEWIKQSGGEAKLALNCVG-GKSSTGIARKLNNNGLMLTYGGMSFQPVTIPTSL 288

Query: 295 AAAREVDVIGIF----------RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQ-KEIED 343
              +     G +             ST    I +   GK+      +    +   K + +
Sbjct: 289 YIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKL--TDAKSIETLYDGTKPLHE 346

Query: 344 AFEISAQGGNAIKVMF 359
            ++         K + 
Sbjct: 347 LYQDGVANSKDGKQLI 362

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score =  116 bits (293), Expect = 6e-30
 Identities = 72/344 (20%), Positives = 127/344 (36%), Gaps = 65/344 (18%)

Query: 33  LPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKK--PMVIGHECAGIIEEVGSEVK 90
           +P      V +++ A G+   + +     R   +  K   P   G + AG+IE VG    
Sbjct: 52  VPIPKDHQVLIKVHACGVNPVETYI----RSGTYSRKPLLPYTPGSDVAGVIEAVGDNAS 107

Query: 91  SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLP 150
           + + GDRV           S   +G Y                  A   +      YKLP
Sbjct: 108 AFKKGDRVF---------TSSTISGGY------------------AEYALAADHTVYKLP 140

Query: 151 DNVSLEEGAMCEPLSVG-VHAC--RRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRI 206
           + +  ++GA    +     +      A V    +V++ G SG +GL     ARA+G  +I
Sbjct: 141 EKLDFKQGA-AIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KI 198

Query: 207 IITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMS 266
           + T    +   I    GA E         +    + K       GID+  + +     +S
Sbjct: 199 LGTAGTEEGQKIVLQNGAHEVFNHRE--VNYIDKIKKYVG--EKGIDIIIEMLANV-NLS 253

Query: 267 TALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRST-----------WPLC 315
             L+    GG+V ++G   T + +      A+E  +IG+  + ST               
Sbjct: 254 KDLSLLSHGGRVIVVGSRGT-IEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAG- 311

Query: 316 IEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAI-KVM 358
              +  G +  KP+I  ++    +++ +A E    G  A  K++
Sbjct: 312 ---MEIGWL--KPVIGSQYPL--EKVAEAHENIIHGSGATGKMI 348

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score =  115 bits (291), Expect = 8e-30
 Identities = 58/351 (16%), Positives = 118/351 (33%), Gaps = 56/351 (15%)

Query: 14  QNMAAWLL----GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHH--FKTMRCANFI 67
           + M A         K LK+     P      + +++ A  +   D               
Sbjct: 5   KEMKAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLK 64

Query: 68  VKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFG 127
              P  +G++ +G + E+GS+V ++ +GD+V        G                   G
Sbjct: 65  NNLPSGLGYDFSGEVIELGSDVNNVNIGDKV-------MG-----------------IAG 100

Query: 128 SPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGV---HACRRANVGPETNVMI 184
            P      A  V        +  + +S  + A   P   G+    A  +A V     V+I
Sbjct: 101 FPDHPCCYAEYVCASPDTIIQKLEKLSFLQAA-SLPT-AGLTALQALNQAEVKQGDVVLI 158

Query: 185 MG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK 243
              +G +G + +  A+  G   +I T    +  +  + LGA++          ++     
Sbjct: 159 HAGAGGVGHLAIQLAKQKGT-TVITT-ASKRNHAFLKALGAEQC---------INYHEED 207

Query: 244 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVI 303
              A+ + +D   D VG D     +++  +  G +  +        + +  A  +     
Sbjct: 208 FLLAISTPVDAVIDLVGGD-VGIQSIDCLKETGCIVSVPTITAGRVIEV--AKQKHRRAF 264

Query: 304 GIFRYRSTWPL--CIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGG 352
           G+ +  +   L    + +   K+  +  I+  F  +  E   A E+   G 
Sbjct: 265 GLLKQFNIEELHYLGKLVSEDKL--RIEISRIFQLS--EAVTAHELLETGH 311

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score =  115 bits (291), Expect = 9e-30
 Identities = 66/268 (24%), Positives = 115/268 (42%), Gaps = 38/268 (14%)

Query: 22  GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGI 81
           G      +   + + GP  V++R  A+G+   D +H   +     + + P+V+G E A +
Sbjct: 12  GPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAV 71

Query: 82  IEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVH 141
           +EEVG  V    VG+RV                              P   G+ + + ++
Sbjct: 72  VEEVGPGVTDFTVGERVC-------------------------TCLPPL--GAYSQERLY 104

Query: 142 PAKLCYKLPDNVSLEEGAMCEPLSVGVHAC----RRANVGPETNVMIM-GSGPIGLVTLL 196
           PA+   K+P ++ L++  +   +  G+ A     +   V P   V+I   +G +G + + 
Sbjct: 105 PAEKLIKVPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVP 164

Query: 197 AARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF 256
            AR  GA  +I T    ++   AR LG   T  ++   +D    V +I    G G+DV +
Sbjct: 165 WARHLGA-TVIGTVSTEEKAETARKLGCHHT--INYSTQDFAEVVREITG--GKGVDVVY 219

Query: 257 DCVGFDKTMSTALNATRPGGKVCLIGLA 284
           D +G D T+  +L+  RP G     G A
Sbjct: 220 DSIGKD-TLQKSLDCLRPRGMCAAYGHA 246

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score =  115 bits (290), Expect = 2e-29
 Identities = 72/391 (18%), Positives = 134/391 (34%), Gaps = 97/391 (24%)

Query: 13  NQNMAAWLL----GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIV 68
           +  M A +L    G+  L++    +P     ++K+R+KA G+   D+     M     I 
Sbjct: 1   SMEMRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDL-----MVRQGNID 55

Query: 69  KKP---MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRF 125
             P   +V G EC+GI+E +G  VK  E+GDRV           +     ++        
Sbjct: 56  NPPKTPLVPGFECSGIVEALGDSVKGYEIGDRV----------MAFVNYNAW-------- 97

Query: 126 FGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVG-VHAC--RRANVGPETNV 182
                     A  V  P +  YK+PD++S  E A   P++    +      AN+    +V
Sbjct: 98  ----------AEVVCTPVEFVYKIPDDMSFSEAA-AFPMNFVTAYVMLFEVANLREGMSV 146

Query: 183 MI-MGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTD- 240
           ++    G +G               +       +    ++            + D + D 
Sbjct: 147 LVHSAGGGVGQAVAQLCSTVPN-VTVFGTASTFKHEAIKDSVT--------HLFDRNADY 197

Query: 241 VGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA-------KTEMTVALT 293
           V +++     G+D+  DC+         L+  +P G   L G +       K+  + A +
Sbjct: 198 VQEVKRISAEGVDIVLDCLC-GDNTGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKS 256

Query: 294 PAAAREVD----------VIGIF--RYRST--------------WPLCIEFLRSGKIDVK 327
                +V+          + G                         L        KI  K
Sbjct: 257 WWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGL----YNQKKI--K 310

Query: 328 PLITHRFGFTQKEIEDAFEISAQGGNAIKVM 358
           P++   +     E+++A +     GN  K++
Sbjct: 311 PVVDSLWALE--EVKEAMQRIHDRGNIGKLI 339

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score =  112 bits (283), Expect = 1e-28
 Identities = 62/277 (22%), Positives = 105/277 (37%), Gaps = 61/277 (22%)

Query: 22  GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFI-----------VKK 70
           G + L+   +        +++V  KA+GI              NFI              
Sbjct: 12  GPEVLQAVEFTPADPAENEIQVENKAIGI--------------NFIDTYIRSGLYPPPSL 57

Query: 71  PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPP 130
           P  +G E AGI+ +VGS VK ++ GDRV                          +  S  
Sbjct: 58  PSGLGTEAAGIVSKVGSGVKHIKAGDRVV-------------------------YAQSAL 92

Query: 131 TNGSLAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMG-S 187
             G+ +      A     LP  +S E+ A    + L+V     +   + P+   +    +
Sbjct: 93  --GAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAA 150

Query: 188 GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA 247
           G +GL+    A+A GA ++I T    Q+   A   GA +   ++   ED+   + +I   
Sbjct: 151 GGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQV--INYREEDLVERLKEITG- 206

Query: 248 MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA 284
            G  + V +D VG D T   +L+  +  G +   G +
Sbjct: 207 -GKKVRVVYDSVGRD-TWERSLDCLQRRGLMVSFGNS 241

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score =  113 bits (284), Expect = 1e-28
 Identities = 56/328 (17%), Positives = 101/328 (30%), Gaps = 64/328 (19%)

Query: 33  LPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKK--PMVIGHECAGIIEEVGSEVK 90
           +P  GP  V +++    I  SDV          +   +      G E  G I   G E  
Sbjct: 44  VPAPGPSQVLIKVNLASINPSDVA----FIKGQYGQPRVKGRPAGFEGVGTIVAGGDEPY 99

Query: 91  S-LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKL 149
           +   VG RVA   G+S         GS+                  A   V  A  C  L
Sbjct: 100 AKSLVGKRVAFATGLSNW-------GSW------------------AEYAVAEAAACIPL 134

Query: 150 PDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRI 206
            D V  E+GA  +  PL+  +          E   ++   +  +  + +  A+  G  R 
Sbjct: 135 LDTVRDEDGAAMIVNPLTA-IAMFDIVKQEGEKAFVMTAGASQLCKLIIGLAKEEGF-RP 192

Query: 207 IITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMS 266
           I+T    +++++ +++GA     ++    D +  + ++         +  D V      S
Sbjct: 193 IVTVRRDEQIALLKDIGAAHV--LNEKAPDFEATLREVMK--AEQPRIFLDAVT-GPLAS 247

Query: 267 TALNATRPGGKVCLIGLAKTEMTVALTPAA--AREVDVIGIF-RYRST------------ 311
              NA     +  + G    + TV   P     +   + G +                  
Sbjct: 248 AIFNAMPKRARWIIYGRLDPDATVIREPGQLIFQHKHIEGFWLSEWMRQFKERRGPAILE 307

Query: 312 -WPLCIEFLRSGKIDVKPLITHRFGFTQ 338
                      G+      +T      +
Sbjct: 308 AQKR----FSDGRW--STDVTAVVPLAE 329

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score =  111 bits (280), Expect = 2e-28
 Identities = 59/343 (17%), Positives = 108/343 (31%), Gaps = 67/343 (19%)

Query: 33  LPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL 92
           +P L   D+ V+ +A+GI   D   +K ++          V G + AG+I +VG++V S 
Sbjct: 24  IPALAADDILVQNQAIGINPVD---WKFIKANPINWSNGHVPGVDGAGVIVKVGAKVDSK 80

Query: 93  EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDN 152
            +G RVA                         +  S   +GS A   V        LPDN
Sbjct: 81  MLGRRVA-------------------------YHTSLKRHGSFAEFTVLNTDRVMTLPDN 115

Query: 153 VSLEEGAMCEPLSVGV---HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIIT 209
           +S E  A   P    +    A  +  +  +  V+I+G G +  +        G   ++  
Sbjct: 116 LSFERAA-ALPC-PLLTAWQAFEKIPLTKQREVLIVGFGAVNNLLTQMLNNAGY--VVDL 171

Query: 210 DVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTAL 269
                  ++A   G            +                   FD V   +  +  +
Sbjct: 172 VSASLSQALAAKRGVRHL------YREPSQVT--------QKYFAIFDAVN-SQNAAALV 216

Query: 270 NATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIF-RYRSTWPLCIEFLRSGKI---- 324
            + +  G +  I      +   + PA  R +    I       +    ++    +     
Sbjct: 217 PSLKANGHIICIQ---DRIPAPIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEAL 273

Query: 325 -------DVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN 360
                   ++      F F Q  + +A + S Q      +  N
Sbjct: 274 LTLIAQGKMEIAAPDIFRFEQ--MIEALDHSEQTKLKTVLTLN 314

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score =  111 bits (280), Expect = 4e-28
 Identities = 58/343 (16%), Positives = 111/343 (32%), Gaps = 69/343 (20%)

Query: 26  LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPM--VIGHECAGIIE 83
           L+++  ++  L   +V VR+    I  SD+          +  + P+  + G+E  GI+E
Sbjct: 20  LQVEYKNIEPLKDNEVFVRMLVRPINPSDLI----PITGAYAHRIPLPNIPGYEGVGIVE 75

Query: 84  EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPA 143
            VG+ V    +G RV            L   G++                     V   A
Sbjct: 76  NVGAFVSRELIGKRV----------LPLRGEGTW------------------QEYVKTSA 107

Query: 144 KLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMG-SGPIGLVTLLAARA 200
                +PD++     A     PL+  V      N+     +++      IG +    ++ 
Sbjct: 108 DFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQI 167

Query: 201 FGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG 260
               R+I    + +       LGA     + T    +   V ++ N  G G D + D +G
Sbjct: 168 LNF-RLIAVTRNNKHTEELLRLGAAYV--IDTSTAPLYETVMELTN--GIGADAAIDSIG 222

Query: 261 FDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRST--------- 311
                +    + RP G    IGL      V       +      IF  R           
Sbjct: 223 GP-DGNELAFSLRPNGHFLTIGLLSGI-QVNWAEIVTKAKVHANIFHLRHWNDEVSPYKW 280

Query: 312 -------WPLCIEFLRSGKIDVKPL-ITHRFGFTQKEIEDAFE 346
                    L    + + ++  + + +   +     +++ A +
Sbjct: 281 QETFRHLIRL----VENEQL--RFMKVHSTYEL--ADVKAAVD 315

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score =  110 bits (278), Expect = 9e-28
 Identities = 62/381 (16%), Positives = 113/381 (29%), Gaps = 84/381 (22%)

Query: 14  QNMAAWLLGI--KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKP 71
               A  +    +         P L    V VR++A+ I  SD                 
Sbjct: 10  PQQTALTVNDHDEVTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSM------RGQFATPW 63

Query: 72  MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT 131
             +G + AG +  VGS+V  ++VGDRV        G  +     +             P 
Sbjct: 64  AFLGTDYAGTVVAVGSDVTHIQVGDRV-------YGAQNEMCPRT-------------PD 103

Query: 132 NGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSV---------------GVHACRRANV 176
            G+ +   V   ++  K+P  +S E+ A   P  +                  A +    
Sbjct: 104 QGAFSQYTVTRGRVWAKIPKGLSFEQAA-ALPAGISTAGLAMKLLGLPLPSPSADQPPTH 162

Query: 177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIE 235
                V++ G S     VT+   R  G    I T        +A++ GA+E         
Sbjct: 163 SKPVYVLVYGGSTATATVTMQMLRLSGY-IPIAT-CSPHNFDLAKSRGAEEV-------- 212

Query: 236 DVD----TDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNAT-RPGGKVCLI--------- 281
             D         I+    + +  + DC+   ++ +    A  R GG    +         
Sbjct: 213 -FDYRAPNLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAGGHYVSLNPFPEHAAT 271

Query: 282 -GLAKTEMTVALTPAAAREVDVIGIFRYRST----------WPLCIEFLRSGKIDVKPLI 330
             +  T+ T+  T            +    +          W +  + +  G++      
Sbjct: 272 RKMVTTDWTLGPT-IFGEGSTWPAPYGRPGSEEERQFGEDLWRIAGQLVEDGRL--VHHP 328

Query: 331 THRFGFTQKEIEDAFEISAQG 351
                     I+   E+  +G
Sbjct: 329 LRVVQGGFDHIKQGMELVRKG 349

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score =  109 bits (276), Expect = 9e-28
 Identities = 78/277 (28%), Positives = 115/277 (41%), Gaps = 61/277 (22%)

Query: 22  GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFI-----------VKK 70
           G + L+   +     GPQ V VR KA+G+              NFI              
Sbjct: 12  GPEVLEYVDFEPEAPGPQAVVVRNKAIGL--------------NFIDTYYRSGLYPAPFL 57

Query: 71  PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPP 130
           P  +G E AG++E VG EV   +VGDRVA                         +   P 
Sbjct: 58  PSGLGAEGAGVVEAVGDEVTRFKVGDRVA-------------------------YGTGPL 92

Query: 131 TNGSLAHKVVHPAKLCYKLPDNVSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMG-S 187
             G+ +   V P     KL D+VS E+ A  M + L+V     +   V P   ++    +
Sbjct: 93  --GAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAA 150

Query: 188 GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA 247
           G +G +    A+A GA ++I T    ++ + A+ LGA ET  +    EDV   V ++ + 
Sbjct: 151 GGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKALGAWET--IDYSHEDVAKRVLELTD- 206

Query: 248 MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA 284
            G    V +D VG D T  T+L++  P G V   G A
Sbjct: 207 -GKKCPVVYDGVGQD-TWLTSLDSVAPRGLVVSFGNA 241

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score =  109 bits (275), Expect = 2e-27
 Identities = 67/341 (19%), Positives = 127/341 (37%), Gaps = 58/341 (17%)

Query: 22  GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGI 81
           G   +K + Y +P++  +++ ++ K  G+   + +     R   +  +KP V+G E +G 
Sbjct: 19  GYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYF----RKGIYPCEKPYVLGREASGT 74

Query: 82  IEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVH 141
           +   G  V + EVGD+VA                ++                   +  + 
Sbjct: 75  VVAKGKGVTNFEVGDQVA-----------YISNSTFA-----------------QYSKIS 106

Query: 142 PAKLCYKLPDNVSLEE-----GAMCEPLSVGVHACRRANVGPETNVMIMG-SGPIGLVTL 195
                 KLP   S EE       + + L+         +V     V++   +G +GL+  
Sbjct: 107 SQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILN 166

Query: 196 LAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS 255
              +  GA   I      ++L IA+  GA+    ++   ED+   V K  N  G G+D S
Sbjct: 167 QLLKMKGA-HTIAVASTDEKLKIAKEYGAEYL--INASKEDILRQVLKFTN--GKGVDAS 221

Query: 256 FDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMT-VALTPAAAREVDVIG--IFRYRSTW 312
           FD VG D T   +L A +  G     G A   +   ++T  + + + ++   ++ Y +  
Sbjct: 222 FDSVGKD-TFEISLAALKRKGVFVSFGNASGLIPPFSITRLSPKNITLVRPQLYGYIADP 280

Query: 313 PLC-------IEFLRSGKIDVKPLITHRFGFTQKEIEDAFE 346
                        + S K+     I   +    ++   A  
Sbjct: 281 EEWKYYSDEFFGLVNSKKL--NIKIYKTYPL--RDYRTAAA 317

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score =  109 bits (274), Expect = 2e-27
 Identities = 71/367 (19%), Positives = 124/367 (33%), Gaps = 71/367 (19%)

Query: 15  NMAAWLL----GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKK 70
           +M A       G + L       P  GP  V V +KA G+C  D      +        K
Sbjct: 21  SMKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDY-----LMTKGEYQLK 75

Query: 71  ---PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFG 127
              P V G E AG++     E   ++ GDRV           +    G Y          
Sbjct: 76  MEPPFVPGIETAGVVRSAP-EGSGIKPGDRV----------MAFNFIGGY---------- 114

Query: 128 SPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVG-VHAC--RRANVGP-ETNVM 183
                   A +V          P  +   E       +   ++    RR  +   ET V+
Sbjct: 115 --------AERVAVAPSNILPTPPQLDDAEAV-ALIANYHTMYFAYARRGQLRAGET-VL 164

Query: 184 IMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVG 242
           ++G +G IG   +  A+  GA ++I            +++GAD    +          V 
Sbjct: 165 VLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSVGADIVLPLEEGWAKA---VR 220

Query: 243 KIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM-TVALTPAAAREVD 301
           +     G+G+D+  D +G       A+      G++ ++G A   + T+ +     R   
Sbjct: 221 EATG--GAGVDMVVDPIGGP-AFDDAVRTLASEGRLLVVGFAAGGIPTIKVNRLLLRNAS 277

Query: 302 VIGIF----------RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG 351
           +IG+               T     + +  G   ++P ++ R   +  E   A +  A G
Sbjct: 278 LIGVAWGEFLRTHADYLYETQAGLEKLVAEG---MRPPVSARIPLS--EGRQALQDFADG 332

Query: 352 GNAIKVM 358
               K++
Sbjct: 333 KVYGKMV 339

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score =  108 bits (272), Expect = 5e-27
 Identities = 87/373 (23%), Positives = 132/373 (35%), Gaps = 75/373 (20%)

Query: 13  NQNMAAWLL----GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIV 68
            Q M    L    G   + I    LP  G  +V VR +A+G+   D+      R  ++  
Sbjct: 26  PQEMRFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDI----AQRQGSYPP 81

Query: 69  KK--PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF 126
            K    ++G E +G I  VG  V    VGD+V          C L   G+Y         
Sbjct: 82  PKDASPILGLELSGEIVGVGPGVSGYAVGDKV----------CGLANGGAY--------- 122

Query: 127 GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGA-MCEPLSVGVHA-CRRANVGPETNVMI 184
                    A   + PA      P      + A + E          + A +    +V+I
Sbjct: 123 ---------AEYCLLPAGQILPFPKGYDAVKAAALPETFFTVWANLFQMAGLTEGESVLI 173

Query: 185 M-GSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK 243
             G+  IG   +  ARAFGA  +  T     +      LGA       +  ED       
Sbjct: 174 HGGTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACERLGAKRGINYRS--EDF---AAV 227

Query: 244 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGL---AKTEMTVALTPAAAREV 300
           I+   G G+D+  D +G        + +    G + +I     A  E  V L+P   + +
Sbjct: 228 IKAETGQGVDIILDMIGAA-YFERNIASLAKDGCLSIIAFLGGAVAE-KVNLSPIMVKRL 285

Query: 301 DVIGIF-RYRST--------------WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAF 345
            V G   R R+               WPL    L +G +   P+I   F F   ++ DA 
Sbjct: 286 TVTGSTMRPRTAEEKRAIRDDLLSEVWPL----LEAGTV--APVIHKVFAFE--DVADAH 337

Query: 346 EISAQGGNAIKVM 358
            +  +G +  KVM
Sbjct: 338 RLLEEGSHVGKVM 350

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score =  103 bits (260), Expect = 2e-25
 Identities = 71/331 (21%), Positives = 113/331 (34%), Gaps = 74/331 (22%)

Query: 34  PTLGPQDVKVRIKALGICGSDVH----HFKTMRCANFIVKKPMVIGHECAGIIEEVGSEV 89
           P   P  V V+I+A G    D           +        P ++G + AG +  VG EV
Sbjct: 28  PQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQP-----LPAILGMDLAGTVVAVGPEV 82

Query: 90  KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKL 149
            S  VGD V        G                   G     G+ A      A+L    
Sbjct: 83  DSFRVGDAV-------FG----------------LTGGVGGLQGTHAQFAAVDARLLASK 119

Query: 150 PDNVSLEEGAMCEPLSVGVHA----CRRANVGPETNVMIM-GSGPIGLVTLLAARAFGAP 204
           P  +++ + +   PL V + A      RA V     V+I  G G +G V +  A A GA 
Sbjct: 120 PAALTMRQAS-VLPL-VFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGA- 176

Query: 205 RIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKT 264
           R+  T      L   R+LGA             + +    ++  G G D+ +D +G    
Sbjct: 177 RVFAT-ARGSDLEYVRDLGATPI------DASREPEDYAAEHTAGQGFDLVYDTLG-GPV 228

Query: 265 MSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRST------------- 311
           +  + +A +  G V          T  L P + ++    G+F   +              
Sbjct: 229 LDASFSAVKRFGHVVSCL---GWGTHKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEML 285

Query: 312 ---WPLCIEFLRSGKIDVKPLITHR-FGFTQ 338
                L    +++GK+   P +  R F   +
Sbjct: 286 READAL----VQTGKL--APRLDPRTFSIAE 310

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score =  101 bits (254), Expect = 2e-24
 Identities = 57/341 (16%), Positives = 106/341 (31%), Gaps = 61/341 (17%)

Query: 34  PTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 93
           P     D+ V +KA+ +   D   +K  R          VIG++ AGI+  VG +V    
Sbjct: 48  PAPAGHDILVEVKAVSVNPVD---YKVRRSTPPDGTDWKVIGYDAAGIVSAVGPDVTLFR 104

Query: 94  VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNV 153
            GD V                  +       + GS    G+ A   +   ++  + P  +
Sbjct: 105 PGDEV------------------F-------YAGSIIRPGTNAEFHLVDERIVGRKPKTL 139

Query: 154 SLEEGAMCEPLSVGVHA----CRRANVGPETNV------MIMGSGPIGLVTLLAARAFGA 203
              E A   PL   + A      R +V            ++ G+G +G + +  AR    
Sbjct: 140 DWAEAAAL-PL-TSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTD 197

Query: 204 PRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDK 263
             +I T    +     ++LGA         I+       ++           F     DK
Sbjct: 198 LTVIATASRPETQEWVKSLGAHHV------IDHSKPLAAEVAALGLGAPAFVFSTTHTDK 251

Query: 264 TMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGK 323
             +   +   P G+ CLI          +     + V +     +        +    G+
Sbjct: 252 HAAEIADLIAPQGRFCLID---DPSAFDIMLFKRKAVSIHHELMFTRPMFGTPDMSEQGR 308

Query: 324 I-----------DVKPLITHRFG-FTQKEIEDAFEISAQGG 352
           +            ++  +T+R        ++ A  +   G 
Sbjct: 309 LLNDVSRLVDEGRLRTTLTNRLSPINAANLKQAHALVESGT 349

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score = 98.5 bits (246), Expect = 2e-23
 Identities = 65/342 (19%), Positives = 119/342 (34%), Gaps = 66/342 (19%)

Query: 34  PTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE 93
           P     ++ V+I+++ +   D     T +    + K P V+G +  G++E VG+EV    
Sbjct: 28  PEPKVHEILVKIQSISVNPVD-----TKQRLMDVSKAPRVLGFDAIGVVESVGNEVTMFN 82

Query: 94  VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNV 153
            GD V                  Y       + GSP  NGS A   +   +L  K P N+
Sbjct: 83  QGDIV------------------Y-------YSGSPDQNGSNAEYQLINERLVAKAPKNI 117

Query: 154 SLEE-GAMCEPLSVGVHA----CRRANVGPETNV-------MIMGSGPIGLVTLLAARAF 201
           S E+  ++  PL  G+ A         +    N        +I G+G +G +    A+A+
Sbjct: 118 SAEQAVSL--PL-TGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAY 174

Query: 202 GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGF 261
           G  R+I T    + +   + +GAD        +   ++ + + +      +D  F     
Sbjct: 175 GL-RVITTASRNETIEWTKKMGADIV------LNHKESLLNQFKTQGIELVDYVFCTFNT 227

Query: 262 DKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRS 321
           D      +   +P G +  I     E    L     + +     F +        + ++ 
Sbjct: 228 DMYYDDMIQLVKPRGHIATI--VAFENDQDLNALKPKSLSFSHEFMFARPLNQTDDMIKH 285

Query: 322 GKI-----------DVKPLITHRFG-FTQKEIEDAFEISAQG 351
            +              +P  T      T + I  A +I    
Sbjct: 286 HEYLEDITNKVEQNIYQPTTTKVIEGLTTENIYQAHQILESN 327

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score = 98.5 bits (246), Expect = 3e-23
 Identities = 67/374 (17%), Positives = 124/374 (33%), Gaps = 74/374 (19%)

Query: 14  QNMAAWLL----GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVK 69
           Q+M A       G + L ++    P+ G  +V +++ A  +  +D+      R   +   
Sbjct: 21  QSMLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQ----RQGQYDPP 76

Query: 70  K--PMVIGHECAGIIEEVGSEVKS-LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF 126
                ++G E +G + E+G   +   ++GD             +L   G           
Sbjct: 77  PGASNILGLEASGHVAELGPGCQGHWKIGDTA----------MALLPGGGQ--------- 117

Query: 127 GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGA-MCEPLSVGVHAC--RRANVGPETNVM 183
                    A  V  P  L   +P+ ++L + A + E              NV     V+
Sbjct: 118 ---------AQYVTVPEGLLMPIPEGLTLTQAAAIPEAWLT-AFQLLHLVGNVQAGDYVL 167

Query: 184 IM-GSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVG 242
           I  G   +G   +   R  GA   ++T    ++L +A  LGA          ED      
Sbjct: 168 IHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAEKLGAAAGFNYKK--EDFSEATL 224

Query: 243 KIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGL---AKTEMTVALTPAAARE 299
           K     G+G+++  DC+G        +N     G+  L GL            +    + 
Sbjct: 225 KFTK--GAGVNLILDCIGGS-YWEKNVNCLALDGRWVLYGLMGGGDING-PLFSKLLFKR 280

Query: 300 VDVIG-IFRYRST--------------WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDA 344
             +I  + R R                 P         ++   P++   +  T  EI++A
Sbjct: 281 GSLITSLLRSRDNKYKQMLVNAFTEQILPH-FSTEGPQRL--LPVLDRIYPVT--EIQEA 335

Query: 345 FEISAQGGNAIKVM 358
            +      N  K++
Sbjct: 336 HKYMEANKNIGKIV 349

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score = 94.9 bits (237), Expect = 2e-22
 Identities = 70/346 (20%), Positives = 123/346 (35%), Gaps = 88/346 (25%)

Query: 34  PTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKK--PMVIGHECAGIIEEVGSEVKS 91
           P     +V +R++A+G+  +D      MR   ++ +   P + G E  G++         
Sbjct: 21  PEAEEGEVVLRVEAVGLNFADHL----MRLGAYLTRLHPPFIPGMEVVGVV--------- 67

Query: 92  LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPD 151
              G R            +L   G                    A +V  P      LP+
Sbjct: 68  --EGRRY----------AALVPQGGL------------------AERVAVPKGALLPLPE 97

Query: 152 NVSLEEGAMCEPLSVG--VHACRRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIII 208
            +S EE A   P+S      A +RA   P   V++   +G +G   +  ARA G  R++ 
Sbjct: 98  GLSPEEAA-AFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLA 155

Query: 209 TDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG--FDKTMS 266
                ++L++   LGA+E A  +   E               G+D+  +  G   ++   
Sbjct: 156 AASRPEKLALPLALGAEEAATYAEVPERA-KA--------WGGLDLVLEVRGKEVEE--- 203

Query: 267 TALNATRPGGKVCLIGLAKTEM-TVALTPAAAREVDVIGIF-RYRST------------W 312
            +L     GG++  IG A+ E+  +       R + V+G +                   
Sbjct: 204 -SLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPLLREGALVEEALGFLL 262

Query: 313 PLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVM 358
           P         ++  +P++   F F   E E AF      G+  KV+
Sbjct: 263 PRL-----GREL--RPVVGPVFPFA--EAEAAFRALLDRGHTGKVV 299

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score = 93.1 bits (231), Expect = 2e-21
 Identities = 43/281 (15%), Positives = 80/281 (28%), Gaps = 63/281 (22%)

Query: 25  TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHH--------------------------F 58
            L +     P  GP +V +RI+A  +  SD+                             
Sbjct: 19  ELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPE 78

Query: 59  KTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYN 118
             MR     +   M +G+E AG++ E GS   +  +  +            +      Y 
Sbjct: 79  GAMRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKT----------VAAIGGAMY- 127

Query: 119 LCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC--EPLSVGVHACRRANV 176
                            +     PA  C  LP+  +  +GA     PL+  +       +
Sbjct: 128 -----------------SQYRCIPADQCLVLPEGATPADGASSFVNPLTA-LGMVETMRL 169

Query: 177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIE 235
              + ++    +  +G +        G   + I     Q   + +  GA      +    
Sbjct: 170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQA-DLLKAQGAVHV--CNAASP 226

Query: 236 DVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGG 276
               D+ +      +G  ++FD  G  K     L       
Sbjct: 227 TFMQDLTEALV--STGATIAFDATGGGKLGGQILTCMEAAL 265

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score = 90.5 bits (225), Expect = 2e-20
 Identities = 68/391 (17%), Positives = 127/391 (32%), Gaps = 101/391 (25%)

Query: 16  MAAWLL----GIKTLKI-QPYHLPTLG-PQDVKVRIKALGICGSDVH------------H 57
             AW++      + L+  Q   +P +  P +V V++ A  +   DV+             
Sbjct: 22  SMAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMK 81

Query: 58  FKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSY 117
              +       + P+ +G + +G++ E G +VK  + GD V                   
Sbjct: 82  RDPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEV------------------- 122

Query: 118 NLCPEMRFFGSPPT--NGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGV------- 168
                   + + P    G+L+  VV         P +++  + A   P  V +       
Sbjct: 123 --------WAAVPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAA-SLPY-VALTAWSAIN 172

Query: 169 -HACRRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE 226
                         V+I+G SG +G   +   +A+ A   +          + R LGAD+
Sbjct: 173 KVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDA--HVTAVCSQDASELVRKLGADD 230

Query: 227 TAKV----STDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG 282
              V    S  +E+                D   D VG   T + A +  +       + 
Sbjct: 231 ---VIDYKSGSVEEQLKS--------LKPFDFILDNVGGS-TETWAPDFLKKWSGATYVT 278

Query: 283 LAKTEMTVALTPAAAREVDVIGIF-------------RYRSTWPL--------CIEFLRS 321
           L    +        A  +   G+               YR  + +          E + +
Sbjct: 279 LVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFFMASGPCLDDIAELVDA 338

Query: 322 GKIDVKPLITHRFGFTQKEIEDAFEISAQGG 352
           GKI  +P+I   F F+  ++ +AF    +G 
Sbjct: 339 GKI--RPVIEQTFPFS--KVPEAFLKVERGH 365

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 80.9 bits (200), Expect = 7e-17
 Identities = 63/355 (17%), Positives = 116/355 (32%), Gaps = 90/355 (25%)

Query: 29  QPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSE 88
           +P     LG  +V++ ++A G+   D         A  +      +G E AG++ E G  
Sbjct: 229 EPTATAPLGDGEVRIAMRAAGVNFRDALI------ALGMYPGVASLGSEGAGVVVETGPG 282

Query: 89  VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYK 148
           V  L  GDRV        G                          +     V   ++  +
Sbjct: 283 VTGLAPGDRV-------MGMIP----------------------KAFGPLAVADHRMVTR 313

Query: 149 LPDNVSLEEGAMCEPLSVGV------HA-CRRANVGPETNVMI-MGSGPIGLVTLLAARA 200
           +P   S    A     SV +      +A    A + P  ++++   +G +G+  +  AR 
Sbjct: 314 IPAGWSFARAA-----SVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARH 368

Query: 201 FGAPRIIIT---------DVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM-GS 250
            GA  +  T         ++  + L+ +R    ++    +T    VD     + N++ G 
Sbjct: 369 LGA-EVYATASEDKWQAVELSREHLASSRTCDFEQQFLGATGGRGVDV----VLNSLAGE 423

Query: 251 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAARE------VDVI- 303
             D S   +               GG    + L KT++   +  A A         D + 
Sbjct: 424 FADASLRML-------------PRGG--RFLELGKTDVRDPVEVADAHPGVSYQAFDTVE 468

Query: 304 -GIFRYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKV 357
            G  R        +E      +  +PL    +   Q    +A    +Q  +  K+
Sbjct: 469 AGPQRIGEMLHELVELFEGRVL--EPLPVTAWDVRQ--APEALRHLSQARHVGKL 519

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score = 77.7 bits (192), Expect = 4e-16
 Identities = 61/354 (17%), Positives = 115/354 (32%), Gaps = 72/354 (20%)

Query: 33  LPTLGPQDVKVRIKALGICGSDVHHFKTMR-CANFIVKKPMVIGHECAGIIEEVGSEVKS 91
           +P  G  D+ VR + +G+  SD+++        +  VK P  IG E  G +  +G    +
Sbjct: 48  VPLPGDGDLLVRNRFVGVNASDINY---SAGRYDPSVKPPFDIGFEGIGEVVALGLSASA 104

Query: 92  -LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLP 150
              VG  VA                                 GS A   V PA +   +P
Sbjct: 105 RYTVGQAVAYMAP-----------------------------GSFAEYTVVPASIATPVP 135

Query: 151 DNVSLEEGAMCEPL---SVGVHACRRANVGP-ETNVMIMGSGPIGLVTLLAARAFGAPRI 206
                E   +        + +       +   +  ++   +G  G   +  ++      +
Sbjct: 136 SVKP-EYLTLLVSGTTAYISLK--ELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HV 191

Query: 207 IITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMS 266
           I T    ++ +  ++LG D      T  E V T    ++     G+DV ++ VG      
Sbjct: 192 IGTCSSDEKSAFLKSLGCDRPINYKT--EPVGT---VLKQEYPEGVDVVYESVGGA-MFD 245

Query: 267 TALNATRPGGKVCLIGLA---KTEMTVALTPAAAREVDVIG---------IFRYRSTWPL 314
            A++A    G++ +IG     +T   ++   A      ++          +  Y S +  
Sbjct: 246 LAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQA 305

Query: 315 CIE----FLRSGKIDVK------PLITHRFGFTQKEIEDAFEISAQGGNAIKVM 358
            +        SG +  +             G   + I  A      G N  K++
Sbjct: 306 AMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGL--ESIFRAVNYMYMGKNTGKIV 357

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Length = 328

 Score = 56.2 bits (136), Expect = 4e-09
 Identities = 64/300 (21%), Positives = 101/300 (33%), Gaps = 65/300 (21%)

Query: 25  TLKIQPYHLPTLGPQDVKVRIK--------ALGICGSDVHHFKTMRCANFIVKK-PMVIG 75
           T  +Q   +  L   DV VR+          L                  IVK  P V G
Sbjct: 17  TAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIP-----------DGKIVKTYPFVPG 65

Query: 76  HECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSL 135
            + AG++    S+      GD V     I+ G     + G         F       G  
Sbjct: 66  IDLAGVVVS--SQHPRFREGDEV-----IATG----YEIG------VTHF-------GGY 101

Query: 136 AHKVVHPAKLCYKLPDNVSLEE----GAMCEPLSVGVHACRRANVGPETNVMIM--GSGP 189
           +       +    LP  ++L+E    G      ++ +H      + PE   +++   +G 
Sbjct: 102 SEYARLHGEWLVPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGG 161

Query: 190 IGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG 249
           +G + +      G      T          R LGA E        EDV  +  +    + 
Sbjct: 162 VGSLAVSMLAKRGYTVEASTG-KAAEHDYLRVLGAKEV----LAREDVMAERIR---PLD 213

Query: 250 SGI-DVSFDCVGFDKTMSTALNATRPGGKVCLIGLA---KTEMTVALTPAAAREVDVIGI 305
                 + D VG  +T++T L+  R GG V + GL    +   TV   P   R V ++GI
Sbjct: 214 KQRWAAAVDPVG-GRTLATVLSRMRYGGAVAVSGLTGGAEVPTTVH--PFILRGVSLLGI 270

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Length = 330

 Score = 54.2 bits (131), Expect = 2e-08
 Identities = 59/301 (19%), Positives = 104/301 (34%), Gaps = 67/301 (22%)

Query: 25  TLKIQPYHLPTLGPQDVKVRIK--------ALGICGSDVHHFKTMRCANFIVKK-PMVIG 75
           ++ ++      L    V +++          L                  IV++ P+++G
Sbjct: 18  SVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKA-----------GGNIVREYPLILG 66

Query: 76  HECAGIIEEVGSEVKSLEVGDRVALEP-GISCGHCSLCKAGSYNLCPEMRFFGSPPTNGS 134
            + AG +    S       GD V      +                           +G 
Sbjct: 67  IDAAGTVVS--SNDPRFAEGDEVIATSYELGVSR-----------------------DGG 101

Query: 135 LAHKVVHPAKLCYKLPDNVSLEE----GAMCEPLSVGVHACRRANVGPE-TNVMIMGS-G 188
           L+     P      LP N+SL+E    G      ++ VH   +  + PE  +V++ G+ G
Sbjct: 102 LSEYASVPGDWLVPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATG 161

Query: 189 PIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM 248
            +G + +      G   +  T  + +     + LGA E        EDV     K   A+
Sbjct: 162 GVGGIAVSMLNKRGYDVVAST-GNREAADYLKQLGASEV----ISREDVYDGTLK---AL 213

Query: 249 GSGI-DVSFDCVGFDKTMSTALNATRPGGKVCLIGLA---KTEMTVALTPAAAREVDVIG 304
                  + D VG  K +++ L+  + GG V + GL    +   TV   P   R V ++G
Sbjct: 214 SKQQWQGAVDPVG-GKQLASLLSKIQYGGSVAVSGLTGGGEVPATVY--PFILRGVSLLG 270

Query: 305 I 305
           I
Sbjct: 271 I 271

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* Length = 324

 Score = 48.5 bits (116), Expect = 1e-06
 Identities = 63/313 (20%), Positives = 96/313 (30%), Gaps = 71/313 (22%)

Query: 16  MAAWLL----GIKTLKIQPYHLPTLGPQDVKVRIK--------ALGICGSDVHHFKTMRC 63
           M A +L    G     +Q      L   DV V +         AL I G           
Sbjct: 1   MQALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITG----------- 49

Query: 64  ANFIVKK-PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE 122
              I++  PM+ G + AG +    SE      G  V     +  G       G      E
Sbjct: 50  KGKIIRHFPMIPGIDFAGTVHA--SEDPRFHAGQEV-----LLTG----WGVG------E 92

Query: 123 MRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEE----GAMCEPLSVGVHACRRANVGP 178
             +       G LA +          LP  +S       G       + V A   A + P
Sbjct: 93  NHW-------GGLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRP 145

Query: 179 ETNVMIM--GSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIED 236
           +   +++   SG +G   +      G     ++          ++LGA+           
Sbjct: 146 QDGEVVVTGASGGVGSTAVALLHKLGYQVAAVSG-RESTHGYLKSLGANRI--------- 195

Query: 237 VDTDVGKIQNAMGSGI-DVSFDCVGFDKTMSTALNATRPGGKVCLIGLA---KTEMTVAL 292
           +  D       +   +   + D VG DK ++  L     GG V   GLA       TV  
Sbjct: 196 LSRDEFAESRPLEKQLWAGAIDTVG-DKVLAKVLAQMNYGGCVAACGLAGGFALPTTVM- 253

Query: 293 TPAAAREVDVIGI 305
            P   R V + G+
Sbjct: 254 -PFILRNVRLQGV 265

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 48.0 bits (114), Expect = 4e-06
 Identities = 60/369 (16%), Positives = 109/369 (29%), Gaps = 85/369 (23%)

Query: 17   AAWLLGIKT------LKIQPY---HLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFI 67
                + + +      ++       +      QD    +    +      +F+ +  A   
Sbjct: 1529 EHAFVNVLSRGDLSSIRWVCSPLHYALPASCQDRLCSVYYTSL------NFRDVMLATGK 1582

Query: 68   VKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFG 127
            +    + G                   G RV                        M    
Sbjct: 1583 LSPDSIPGKWLTRDCMLGMEFSGRDASGRRV------------------------MGMV- 1617

Query: 128  SPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGV------HA-CRRANVGPET 180
                   LA  V+      +++P   +LEE A     SV +      ++   R  + P  
Sbjct: 1618 ---PAEGLATSVLLLQHATWEVPSTWTLEEAA-----SVPIVYTTAYYSLVVRGRMQPGE 1669

Query: 181  NVMI-MGSGPIGLVTLLAARAFGAPRIIITDVDVQR-LSIARNLGADETAKVS---TDIE 235
            +V+I  GSG +G   +  A + G           +R    AR    DET   +   T  E
Sbjct: 1670 SVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDTSFE 1729

Query: 236  DVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT--------E 287
                         G G+D+  + +  +K +  ++      G    + + K          
Sbjct: 1730 QHVLRHTA-----GKGVDLVLNSLAEEK-LQASVRCLAQHG--RFLEIGKFDLSNNHALG 1781

Query: 288  MTVALTPAAAREVDVIGIF-----RYRSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIE 342
            M V L       + +  +F      ++    L    ++ G   V+PL    F  T  ++E
Sbjct: 1782 MAVFLKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQEGV--VQPLKCTVFPRT--KVE 1837

Query: 343  DAFEISAQG 351
             AF   AQG
Sbjct: 1838 AAFRYMAQG 1846

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A* Length = 298

 Score = 40.2 bits (93), Expect = 7e-04
 Identities = 13/110 (11%), Positives = 33/110 (30%), Gaps = 10/110 (9%)

Query: 174 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTD 233
                    + +G GP+ L  +L +  +G  R+ + +++     ++R +           
Sbjct: 118 GRFRRGERAVFIGGGPLPLTGILLSHVYGM-RVNVVEIEPDIAELSRKVIE------GLG 170

Query: 234 IEDVDTDVGKIQNAMGSGIDVSFD---CVGFDKTMSTALNATRPGGKVCL 280
           ++ V+   G      G   DV           +             ++  
Sbjct: 171 VDGVNVITGDETVIDGLEFDVLMVAALAEPKRRVFRNIHRYVDTETRIIY 220

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	361
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	100.0
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	100.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	100.0
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	100.0
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	100.0
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.85
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	99.2
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	98.95
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.86
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.65
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.63
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.61
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.55
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.51
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	98.35
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	98.34
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	98.23
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	98.18
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	98.17
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	98.11
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	97.96
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	97.95
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	97.93
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	97.89
2b25_A	336	Hypothetical protein; structural genomics, methyl	97.89
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.85
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.84
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	97.81
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	97.67
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.65
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	97.65
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	97.64
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.59
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	97.58
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	97.56
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	97.55
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	97.55
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.54
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	97.5
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.47
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	97.44
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	97.43
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	97.39
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	97.37
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	97.36
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	97.34
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	97.32
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	97.31
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	97.3
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	97.28
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	97.22
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	97.22
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	97.2
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	97.2
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	97.19
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	97.16
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.16
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	97.15
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	97.14
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	97.08
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	97.07
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	97.07
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	97.06
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	97.06
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.05
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.04
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	97.03
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	97.02
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	97.02
3duw_A	223	OMT, O-methyltransferase, putative; alternating of	97.0
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	96.99
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	96.99
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.97
1ixk_A	315	Methyltransferase; open beta sheet; 1.90A {Pyrococ	96.94
3iv6_A	261	Putative Zn-dependent alcohol dehydrogenase; alpha	96.93
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	96.93
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	96.91
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	96.91
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	96.9
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	96.9
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	96.9
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	96.9
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	96.9
1u2z_A	433	Histone-lysine N-methyltransferase, H3 lysine-79 s	96.89
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	96.89
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	96.89
3uwp_A	438	Histone-lysine N-methyltransferase, H3 lysine-79;	96.88
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	96.86
3imf_A	257	Short chain dehydrogenase; structural genomics, in	96.85
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	96.85
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	96.85
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	96.84
1sui_A	247	Caffeoyl-COA O-methyltransferase; rossmann fold, p	96.84
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	96.83
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	96.83
1vl5_A	260	Unknown conserved protein BH2331; putative methylt	96.82
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	96.82
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	96.82
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	96.81
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	96.81
1nt2_A	210	Fibrillarin-like PRE-rRNA processing protein; adeM	96.8
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	96.78
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	96.77
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	96.75
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.74
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	96.72
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	96.72
4dqx_A	277	Probable oxidoreductase protein; structural genomi	96.72
3adn_A	294	Spermidine synthase; aminopropyltransferase, polya	96.71
4gek_A	261	TRNA (CMO5U34)-methyltransferase; structural genom	96.71
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	96.71
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	96.71
3m4x_A	456	NOL1/NOP2/SUN family protein; mtase domain, PUA do	96.7
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	96.7
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.69
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	96.67
3c3y_A	237	Pfomt, O-methyltransferase; plant secondary metabo	96.67
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	96.66
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	96.66
3m33_A	226	Uncharacterized protein; structural genomics, PSI-	96.66
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	96.65
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	96.64
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.64
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.64
2o57_A	297	Putative sarcosine dimethylglycine methyltransfera	96.63
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	96.63
1yzh_A	214	TRNA (guanine-N(7)-)-methyltransferase; alpha-beta	96.62
3ajd_A	274	Putative methyltransferase MJ0026; tRNA, M5C, ross	96.62
3id6_C	232	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	96.61
1nvm_B	312	Acetaldehyde dehydrogenase (acylating), 4-hydroxy-	96.61
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	96.61
1xxl_A	239	YCGJ protein; structural genomics, protein structu	96.6
1iy9_A	275	Spermidine synthase; rossmann fold, structural gen	96.6
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	96.59
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	96.59
3g5t_A	299	Trans-aconitate 3-methyltransferase; structural ge	96.59
3bus_A	273	REBM, methyltransferase; rebeccamycin synthesis; H	96.58
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	96.58
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	96.56
1mjf_A	281	Spermidine synthase; spermidine synthetase, struct	96.56
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	96.55
3g89_A	249	Ribosomal RNA small subunit methyltransferase G; 1	96.54
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	96.54
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	96.53
3e18_A	359	Oxidoreductase; dehydrogenase, NAD-binding, struct	96.53
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	96.52
2yxl_A	450	PH0851 protein, 450AA long hypothetical FMU protei	96.52
3evz_A	230	Methyltransferase; NYSGXRC, NEW YORK SGX research	96.51
2p35_A	259	Trans-aconitate 2-methyltransferase; SAM dependent	96.51
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	96.5
3g07_A	292	7SK snRNA methylphosphate capping enzyme; structur	96.5
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	96.49
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	96.49
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	96.49
3f4k_A	257	Putative methyltransferase; structural genomics, P	96.49
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	96.49
1dus_A	194	MJ0882; hypothetical protein, methanococcus jannas	96.49
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	96.49
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	96.48
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	96.48
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	96.48
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	96.47
2fca_A	213	TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bac	96.47
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	96.47
3dli_A	240	Methyltransferase; PSI-II, NYSGXRC, structural gen	96.46
1g8a_A	227	Fibrillarin-like PRE-rRNA processing protein; rRNA	96.46
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	96.45
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	96.45
3sm3_A	235	SAM-dependent methyltransferases; NESG, structural	96.44
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	96.44
2pxx_A	215	Uncharacterized protein MGC2408; structural genomi	96.43
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	96.43
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	96.43
1xj5_A	334	Spermidine synthase 1; structural genomics, protei	96.43
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	96.43
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	96.43
3tr6_A	225	O-methyltransferase; cellular processes; HET: SAH;	96.42
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	96.41
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	96.41
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	96.39
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	96.39
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	96.39
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	96.37
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	96.34
2frx_A	479	Hypothetical protein YEBU; rossmann-type S-adenosy	96.34
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	96.33
2i7c_A	283	Spermidine synthase; transferase, structural genom	96.32
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	96.32
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	96.31
2b2c_A	314	Spermidine synthase; beta-alpha, transferase; 2.50	96.31
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	96.3
1inl_A	296	Spermidine synthase; beta-barrel, rossman fold, st	96.29
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	96.29
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	96.28
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	96.28
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	96.28
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	96.26
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	96.26
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	96.26
1sqg_A	429	SUN protein, FMU protein; rossmann-fold, mixed bet	96.25
1zx0_A	236	Guanidinoacetate N-methyltransferase; structural g	96.25
1ej0_A	180	FTSJ; methyltransferase, adoMet, adenosyl methioni	96.25
2o07_A	304	Spermidine synthase; structural genomics, structur	96.25
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	96.25
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	96.24
3e8s_A	227	Putative SAM dependent methyltransferase; NP_74470	96.24
3m6w_A	464	RRNA methylase; rRNA methyltransferase, 5-methylcy	96.24
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	96.24
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	96.23
3kkz_A	267	Uncharacterized protein Q5LES9; putative methyltra	96.23
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	96.23
3l8d_A	242	Methyltransferase; structural genomics, PSI, nysgr	96.21
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	96.21
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	96.21
3mgg_A	276	Methyltransferase; NYSGXRC, PSI-II, protein struct	96.21
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	96.21
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	96.2
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	96.2
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	96.2
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	96.19
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.19
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	96.18
2pt6_A	321	Spermidine synthase; transferase, structural genom	96.18
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	96.18
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	96.18
2esr_A	177	Methyltransferase; structural genomics, hypothetic	96.18
3e23_A	211	Uncharacterized protein RPA2492; alpha-beta protei	96.17
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	96.16
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	96.16
1xq1_A	266	Putative tropinone reducatse; structural genomics,	96.16
3g5l_A	253	Putative S-adenosylmethionine dependent methyltran	96.15
3bkw_A	243	MLL3908 protein, S-adenosylmethionine dependent me	96.15
3hnr_A	220	Probable methyltransferase BT9727_4108; structural	96.15
4had_A	350	Probable oxidoreductase protein; structural genomi	96.15
1id1_A	153	Putative potassium channel protein; RCK domain, E.	96.14
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	96.14
2kw5_A	202	SLR1183 protein; structural genomics, northeast st	96.13
3gjy_A	317	Spermidine synthase; APC62791, structural genomics	96.13
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	96.13
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	96.12
3dxy_A	218	TRNA (guanine-N(7)-)-methyltransferase; rossmann f	96.12
1xkq_A	280	Short-chain reductase family member (5D234); parra	96.11
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	96.1
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	96.1
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	96.1
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	96.09
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	96.09
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	96.08
3dh0_A	219	SAM dependent methyltransferase; cystal structure,	96.07
3cxt_A	291	Dehydrogenase with different specificities; rossma	96.07
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	96.07
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	96.07
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	96.07
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.06
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	96.06
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	96.06
3bwc_A	304	Spermidine synthase; SAM, SGPP, structura genomics	96.05
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	96.05
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	96.05
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	96.03
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	96.03
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	96.02
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	96.02
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	96.01
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	96.01
1xhl_A	297	Short-chain dehydrogenase/reductase family member	96.01
3ntv_A	232	MW1564 protein; rossmann fold, putative methyltran	96.01
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	96.01
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	96.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	96.0
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	96.0
3p9n_A	189	Possible methyltransferase (methylase); RV2966C, a	96.0
2vdv_E	246	TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl	95.99
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	95.99
3i9f_A	170	Putative type 11 methyltransferase; structural gen	95.99
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	95.99
2ipx_A	233	RRNA 2'-O-methyltransferase fibrillarin; FBL, stru	95.98
2yqz_A	263	Hypothetical protein TTHA0223; RNA methyltransfera	95.98
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	95.98
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	95.98
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	95.98
1uir_A	314	Polyamine aminopropyltransferase; spermidien synth	95.98
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	95.97
4e2x_A	416	TCAB9; kijanose, tetronitrose, tetradeoxy sugar, s	95.97
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	95.97
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	95.97
3ccf_A	279	Cyclopropane-fatty-acyl-phospholipid synthase; YP_	95.97
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	95.96
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	95.96
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	95.96
2glx_A	332	1,5-anhydro-D-fructose reductase; NADP(H) dependen	95.95
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	95.95
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	95.95
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	95.93
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	95.93
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	95.92
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	95.92
4hkt_A	331	Inositol 2-dehydrogenase; structural genomics, nys	95.92
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	95.92
4dmg_A	393	Putative uncharacterized protein TTHA1493; rRNA, m	95.92
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	95.9
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	95.9
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	95.89
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	95.89
3dlc_A	219	Putative S-adenosyl-L-methionine-dependent methylt	95.89
3rc1_A	350	Sugar 3-ketoreductase; sugar biosynthesis, TDP bin	95.88
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	95.88
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	95.88
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	95.87
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	95.86
3jwh_A	217	HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena	95.86
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	95.86
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	95.86
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	95.86
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	95.85
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	95.85
3ggd_A	245	SAM-dependent methyltransferase; YP_325210.1, stru	95.84
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	95.84
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	95.84
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	95.84
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	95.83
2cmg_A	262	Spermidine synthase; transferase, putrescine amino	95.83
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	95.83
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	95.83
3cgg_A	195	SAM-dependent methyltransferase; NP_600671.1, meth	95.82
3q2i_A	354	Dehydrogenase; rossmann fold, UDP-sugar binding, N	95.81
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	95.8
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	95.8
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	95.79
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	95.78
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	95.78
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.78
3r3h_A	242	O-methyltransferase, SAM-dependent; structural gen	95.78
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	95.77
3rih_A	293	Short chain dehydrogenase or reductase; structural	95.77
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	95.77
3h2b_A	203	SAM-dependent methyltransferase; alpha-beta protei	95.76
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	95.75
2xvm_A	199	Tellurite resistance protein TEHB; antibiotic resi	95.73
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	95.73
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	95.73
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	95.73
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	95.72
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	95.72
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	95.72
2ozv_A	260	Hypothetical protein ATU0636; structural genomics,	95.71
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	95.7
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	95.7
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	95.7
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	95.7
3lpm_A	259	Putative methyltransferase; structural genomics, p	95.69
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	95.68
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	95.68
1xdz_A	240	Methyltransferase GIDB; MCSG, protein structure in	95.67
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	95.67
2ex4_A	241	Adrenal gland protein AD-003; methyltransferase, s	95.65
3u81_A	221	Catechol O-methyltransferase; neurotransmitter deg	95.65
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	95.65
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	95.62
1xtp_A	254	LMAJ004091AAA; SGPP, structural genomics, PSI, pro	95.61
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	95.59
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	95.58
3cvo_A	202	Methyltransferase-like protein of unknown functio;	95.57
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	95.56
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	95.56
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	95.55
3euw_A	344	MYO-inositol dehydrogenase; protein structure init	95.54
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	95.53
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	95.53
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	95.53
3c3p_A	210	Methyltransferase; NP_951602.1, structural genomic	95.53
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	95.52
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	95.52
4hg2_A	257	Methyltransferase type 11; structural genomics, PS	95.52
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	95.51
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	95.51
2avn_A	260	Ubiquinone/menaquinone biosynthesis methyltransfe	95.5
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	95.5
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	95.5
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	95.5
2igt_A	332	SAM dependent methyltransferase; alpha-beta sandwi	95.5
1spx_A	278	Short-chain reductase family member (5L265); paral	95.47
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	95.47
2frn_A	278	Hypothetical protein PH0793; structural genomics,	95.46
1ws6_A	171	Methyltransferase; structural genomics, riken stru	95.46
4dzr_A	215	Protein-(glutamine-N5) methyltransferase, release	95.45
3ezy_A	344	Dehydrogenase; structural genomics, unknown functi	95.44
3e9m_A	330	Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA,	95.44
3dou_A	191	Ribosomal RNA large subunit methyltransferase J; c	95.43
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	95.43
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	95.42
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	95.41
2bm8_A	236	Cephalosporin hydroxylase CMCI; cephamycin biosynt	95.41
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	95.41
4fb5_A	393	Probable oxidoreductase protein; PSI-biology, nysg	95.4
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	95.39
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	95.38
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	95.38
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	95.37
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.36
4htf_A	285	S-adenosylmethionine-dependent methyltransferase;	95.34
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	95.34
3db2_A	354	Putative NADPH-dependent oxidoreductase; two domai	95.33
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	95.33
3hp7_A	291	Hemolysin, putative; structural genomics, APC64019	95.32
3ege_A	261	Putative methyltransferase from antibiotic biosyn	95.3
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	95.3
3jwg_A	219	HEN1, methyltransferase type 12; 1.90A {Clostridiu	95.3
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	95.3
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	95.29
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	95.28
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	95.27
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	95.25
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	95.25
3dtn_A	234	Putative methyltransferase MM_2633; structural gen	95.23
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	95.23
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	95.22
3ckk_A	235	TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-	95.21
4fsd_A	383	Arsenic methyltransferase; rossmann fold; 1.75A {C	95.21
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	95.21
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	95.2
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	95.19
1wzn_A	252	SAM-dependent methyltransferase; structural genomi	95.19
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	95.19
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	95.18
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	95.17
3k6r_A	278	Putative transferase PH0793; structural genomics,	95.17
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	95.15
3kr9_A	225	SAM-dependent methyltransferase; class I rossmann-	95.14
3a27_A	272	TYW2, uncharacterized protein MJ1557; wybutosine m	95.14
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	95.13
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	95.13
2yxd_A	183	Probable cobalt-precorrin-6Y C(15)-methyltransfer	95.12
3opn_A	232	Putative hemolysin; structural genomics, PSI-2, pr	95.1
3m70_A	286	Tellurite resistance protein TEHB homolog; structu	95.09

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=5.4e-60  Score=438.53  Aligned_cols=346  Identities=37%  Similarity=0.625  Sum_probs=308.5

Q ss_pred             CCcccceEEEEeeCCceEEEEecCC--------CCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEE
Q 018075           10 GDKNQNMAAWLLGIKTLKIQPYHLP--------TLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGI   81 (361)
Q Consensus        10 ~~~~~~~~~~~~~~~~l~~~~~~~p--------~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~   81 (361)
                      .++++|+++++.+++.++++++|.|        +|+++||||||+++|||++|++.+.+...+....++|+++|||++|+
T Consensus         4 ~~~~~mka~~~~~~~~l~~~~~~~P~~~~~~~~~~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~p~v~G~E~~G~   83 (363)
T 3m6i_A            4 SASKTNIGVFTNPQHDLWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGE   83 (363)
T ss_dssp             -CCSCCEEEEECTTCCEEEEECSSCHHHHHHTCSCCTTEEEEEEEEEECCHHHHHHHHHSBSSSCBCCSCEECCCEEEEE
T ss_pred             CCcccceeEEEeCCCcEEEEEecCCccccccCCCcCCCeEEEEEeEEeecHhhHHHHcCCCCCCccCCCCcccCcceEEE
Confidence            3678889888889999999999999        99999999999999999999998875443444457799999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc
Q 018075           82 IEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC  161 (361)
Q Consensus        82 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~  161 (361)
                      |+++|++|++|++||||++.+..+|+.|.+|+.|+++.|++..+.+.....|+|+||++++++.++++|+ +++++||++
T Consensus        84 V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~-~s~~~aa~~  162 (363)
T 3m6i_A           84 VIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKIGN-MSYENGAML  162 (363)
T ss_dssp             EEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTSTTSCCSCBSEEEEEGGGEEECTT-CCHHHHHHH
T ss_pred             EEEECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCccccCCCCCCccceeEEEEehhhEEECCC-CCHHHHHhh
Confidence            9999999999999999999999999999999999999999998888766789999999999999999999 999999988


Q ss_pred             chhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCC---ccchh
Q 018075          162 EPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTD---IEDVD  238 (361)
Q Consensus       162 ~~~~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~---~~~~~  238 (361)
                      .++++||++++++++++|++|||+|+|++|++++|+||.+|+++|+++++++++.++++++ ++.++++..+   ..++.
T Consensus       163 ~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~~~~~~~~~~~~~~~~  241 (363)
T 3m6i_A          163 EPLSVALAGLQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPEVVTHKVERLSAEESA  241 (363)
T ss_dssp             HHHHHHHHHHHHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTTCEEEECCSCCHHHHH
T ss_pred             hHHHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-chhcccccccccchHHHH
Confidence            8899999999889999999999999999999999999999997699999999999999999 7665554322   23455


Q ss_pred             HHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecCCCcHHHHHHH
Q 018075          239 TDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEF  318 (361)
Q Consensus       239 ~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  318 (361)
                      +.++++.  ++.++|+|||++|++..++.++++|+++|+++.+|.......++...++.+++++.+++.+.+++++++++
T Consensus       242 ~~v~~~t--~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~l  319 (363)
T 3m6i_A          242 KKIVESF--GGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQIPFMRASVREVDLQFQYRYCNTWPRAIRL  319 (363)
T ss_dssp             HHHHHHT--SSCCCSEEEECSCCHHHHHHHHHHSCTTCEEEECCCCCSCCCCCHHHHHHHTCEEEECCSCSSCHHHHHHH
T ss_pred             HHHHHHh--CCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEccCCCCccccHHHHHhcCcEEEEccCCHHHHHHHHHH
Confidence            5554443  46799999999998878999999999999999999876666677778899999999998888899999999


Q ss_pred             HHcCCCCCCCceEEEecCChhhHHHHHHHHhcC-CCceEEEEeC
Q 018075          319 LRSGKIDVKPLITHRFGFTQKEIEDAFEISAQG-GNAIKVMFNL  361 (361)
Q Consensus       319 l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~-~~~gkvvi~~  361 (361)
                      +++|++++++.++++|+|  +++++|++.+.++ ...+|+|+++
T Consensus       320 ~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~~~~~Kvvi~~  361 (363)
T 3m6i_A          320 VENGLVDLTRLVTHRFPL--EDALKAFETASDPKTGAIKVQIQS  361 (363)
T ss_dssp             HHTTSSCCGGGEEEEEEG--GGHHHHHHHHHCGGGCCSEEEEEC
T ss_pred             HHhCCCChHHceeeeeeH--HHHHHHHHHHhccCCCeEEEEEec
Confidence            999999888899999999  9999999999988 6789999874

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.4e-59  Score=431.25  Aligned_cols=347  Identities=45%  Similarity=0.808  Sum_probs=301.8

Q ss_pred             CcccceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCC
Q 018075           11 DKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVK   90 (361)
Q Consensus        11 ~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   90 (361)
                      |+++|+++++.+++.++++++|.|+|+++||||||+++|||++|++.+.+.........+|+++|||++|+|+++|++|+
T Consensus         1 m~~~mka~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~G~V~~vG~~v~   80 (352)
T 1e3j_A            1 MASDNLSAVLYKQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVK   80 (352)
T ss_dssp             ---CCEEEEEEETTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCC
T ss_pred             CcccCEEEEEEcCCcEEEEEecCCCCCCCeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccceEEEEEeCCCCC
Confidence            55678888888999999999999999999999999999999999998774322222235799999999999999999999


Q ss_pred             CCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHHHHHH
Q 018075           91 SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHA  170 (361)
Q Consensus        91 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~  170 (361)
                      +|++||||++.+..+|+.|.+|+.|++++|++..+++.....|+|+||++++++.++++|+++++++||++.++.+||++
T Consensus        81 ~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~ta~~a  160 (352)
T 1e3j_A           81 HLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALLEPLSVGVHA  160 (352)
T ss_dssp             SCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHTHHHHHHHHHH
T ss_pred             CCCCCCEEEEcCcCCCCCChhhhCcCcccCCCCcccCcCCCCccceeEEEeChHHeEECcCCCCHHHHHhhchHHHHHHH
Confidence            99999999999888999999999999999999887765445899999999999999999999999999987889999999


Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhh-cC
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA-MG  249 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~  249 (361)
                      ++.+++++|++|||+|+|++|++++|+|+.+|++ |+++++++++.++++++|++.++++.. ..++.+.+.+.... .+
T Consensus       161 l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~-Vi~~~~~~~~~~~~~~lGa~~~~~~~~-~~~~~~~i~~~~~~~~g  238 (352)
T 1e3j_A          161 CRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAF-VVCTARSPRRLEVAKNCGADVTLVVDP-AKEEESSIIERIRSAIG  238 (352)
T ss_dssp             HHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCE-EEEEESCHHHHHHHHHTTCSEEEECCT-TTSCHHHHHHHHHHHSS
T ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCE-EEEEcCCHHHHHHHHHhCCCEEEcCcc-cccHHHHHHHHhccccC
Confidence            9888999999999999999999999999999994 899999999999999999998887642 13444555443210 14


Q ss_pred             CCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCc
Q 018075          250 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPL  329 (361)
Q Consensus       250 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~~~~~~~  329 (361)
                      .++|++||++|.+..++.++++|+++|+++.+|.......++...++.+++++.+++.+.++++++++++++|++++.+.
T Consensus       239 ~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~l~~~g~i~~~~~  318 (352)
T 1e3j_A          239 DLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYCNDYPIALEMVASGRCNVKQL  318 (352)
T ss_dssp             SCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSCCCCCHHHHHTTTCEEEECCSCSSCHHHHHHHHHTTSCCCGGG
T ss_pred             CCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccccHHHHHhcCcEEEEeccchHHHHHHHHHHHcCCCChHHh
Confidence            68999999999877889999999999999999975544456667788999999998877888999999999999987888


Q ss_pred             eEEEecCChhhHHHHHHHHhcCC-CceEEEEeC
Q 018075          330 ITHRFGFTQKEIEDAFEISAQGG-NAIKVMFNL  361 (361)
Q Consensus       330 ~~~~~~l~~~~~~~a~~~l~~~~-~~gkvvi~~  361 (361)
                      ++++|+|  +++++|++.+.+++ ..+|+|+++
T Consensus       319 i~~~~~l--~~~~~A~~~~~~~~~~~~Kvvi~~  349 (352)
T 1e3j_A          319 VTHSFKL--EQTVDAFEAARKKADNTIKVMISC  349 (352)
T ss_dssp             EEEEEEG--GGHHHHHHHHHHCCTTCSEEEEEC
T ss_pred             eeEEecH--HHHHHHHHHHhcCCCCceEEEEec
Confidence            9999999  99999999999987 689999874

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=4.5e-59  Score=431.01  Aligned_cols=344  Identities=45%  Similarity=0.820  Sum_probs=302.3

Q ss_pred             cccceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCC
Q 018075           12 KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS   91 (361)
Q Consensus        12 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   91 (361)
                      .++|+++++.+++.++++++|.|+|+++||+|||.++|||++|++.+.|...+.....+|+++|||++|+|+++|++|++
T Consensus         5 ~~~mka~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~V~~   84 (356)
T 1pl8_A            5 KPNNLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKH   84 (356)
T ss_dssp             CCCCEEEEEEETTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCS
T ss_pred             ccCceEEEEecCCcEEEEEccCCCCCCCeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEEEEEEECCCCCC
Confidence            35678888888999999999999999999999999999999999988753222222357999999999999999999999


Q ss_pred             CCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHHHHHHH
Q 018075           92 LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHAC  171 (361)
Q Consensus        92 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l  171 (361)
                      |++||||++.+..+|++|.+|+.|+++.|++..+++.....|+|+||++++++.++++|+++++++||++.++.+||+++
T Consensus        85 ~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~~~~~~ta~~al  164 (356)
T 1pl8_A           85 LKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEPLSVGIHAC  164 (356)
T ss_dssp             CCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeccCCCCCChHHHCcCcccCCCccccCcCCCCCccccEEEeehHHEEECcCCCCHHHHHhhchHHHHHHHH
Confidence            99999999999999999999999999999998877654457999999999999999999999999999878899999999


Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCC-CccchhHHHHHHHhhcCC
Q 018075          172 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST-DIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       172 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~-~~~~~~~~~~~~~~~~~~  250 (361)
                      +.+++++|++|||+|+|++|++++|+|+.+|+..|+++++++++.++++++|++.++++.. +..++.+.+++..   +.
T Consensus       165 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~---~~  241 (356)
T 1pl8_A          165 RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQL---GC  241 (356)
T ss_dssp             HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHH---TS
T ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCcccccchHHHHHHHHh---CC
Confidence            8889999999999999999999999999999977999999999999999999998887642 1134444444432   36


Q ss_pred             CccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCce
Q 018075          251 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKIDVKPLI  330 (361)
Q Consensus       251 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~~~~~~~~  330 (361)
                      ++|+|||++|.+..++.++++|+++|+++.+|.......++...++.+++++.++..+.++++++++++++|++++.+.+
T Consensus       242 g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~l~~~g~i~~~~~i  321 (356)
T 1pl8_A          242 KPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWPVAISMLASKSVNVKPLV  321 (356)
T ss_dssp             CCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSCCCCCHHHHHHTTCEEEECCSCSSCHHHHHHHHHTTSCCCGGGE
T ss_pred             CCCEEEECCCChHHHHHHHHHhcCCCEEEEEecCCCCCccCHHHHHhcceEEEEecccHHHHHHHHHHHHcCCCChHHhe
Confidence            89999999998878999999999999999999755444566677889999999988777889999999999999878899


Q ss_pred             EEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          331 THRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       331 ~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      +++|+|  +++++|++.++++ ..+|+|+++
T Consensus       322 ~~~~~l--~~~~~A~~~~~~~-~~gKvvi~~  349 (356)
T 1pl8_A          322 THRFPL--EKALEAFETFKKG-LGLKIMLKC  349 (356)
T ss_dssp             EEEEEG--GGHHHHHHHHHTT-CCSEEEEEC
T ss_pred             EEEecH--HHHHHHHHHHhCC-CceEEEEeC
Confidence            999999  9999999999998 889999874

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=2e-59  Score=434.97  Aligned_cols=344  Identities=28%  Similarity=0.529  Sum_probs=305.0

Q ss_pred             ccCCcccceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCC
Q 018075            8 DEGDKNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGS   87 (361)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   87 (361)
                      +..+|++|+++++.+++.++++++|.|+|++|||+|||.++|||++|++.+.|..    +..+|+++|||++|+|+++|+
T Consensus        17 ~~~~p~~mkA~v~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~----~~~~p~v~G~e~~G~V~~vG~   92 (370)
T 4ej6_A           17 NLYFQSMMKAVRLESVGNISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEF----PSTPPVTLGHEFCGIVVEAGS   92 (370)
T ss_dssp             ----CCEEEEEEEEETTEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTSS----CCCSSEECCCSEEEEEEEECT
T ss_pred             ccccchheEEEEEecCCceEEEEccCCCCCCCeEEEEEEEEeecHHHHHHHcCCC----CCCCCeecCcceEEEEEEECC
Confidence            3457777888888889999999999999999999999999999999999988753    357799999999999999999


Q ss_pred             CCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHHH
Q 018075           88 EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVG  167 (361)
Q Consensus        88 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a  167 (361)
                      +|++|++||||++.+..+|+.|.+|+.|++++|++..+++.. ..|+|+||++++++.++++|+++++++||++.++++|
T Consensus        93 ~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~-~~G~~aey~~v~~~~~~~~P~~~~~~~aal~~~~~ta  171 (370)
T 4ej6_A           93 AVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIH-RDGGFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACC  171 (370)
T ss_dssp             TCCSSCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEEBTTT-BCCSSBSEEEEEGGGEEEECTTSCTTGGGGHHHHHHH
T ss_pred             CCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCccccCCC-CCCcceEEEEEchhhEEECCCCCCHHHHhhhhHHHHH
Confidence            999999999999999999999999999999999998887753 6899999999999999999999999999977899999


Q ss_pred             HHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhh
Q 018075          168 VHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       168 ~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~  247 (361)
                      |++++.+++++|++|||+|+|++|++++|+|+.+|+.+|+++++++++.++++++|++.++++..  .++.+.+++....
T Consensus       172 ~~~l~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~--~~~~~~i~~~~~~  249 (370)
T 4ej6_A          172 LHGVDLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVDPSA--GDVVEAIAGPVGL  249 (370)
T ss_dssp             HHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTS--SCHHHHHHSTTSS
T ss_pred             HHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEECCCC--cCHHHHHHhhhhc
Confidence            99998899999999999999999999999999999988999999999999999999999888643  4666665542112


Q ss_pred             cCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC--CcceechHhhhcCcEEEEeecCCCcHHHHHHHHHcCCCC
Q 018075          248 MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT--EMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKID  325 (361)
Q Consensus       248 ~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~g~~~  325 (361)
                      .++++|+|||++|.+..++.++++|+++|+++.+|....  ..+++...++.+++++.|++....+++++++++++|+++
T Consensus       250 ~~gg~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~l~~~g~i~  329 (370)
T 4ej6_A          250 VPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSFINPFVHRRAADLVATGAIE  329 (370)
T ss_dssp             STTCEEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCCTTCCCCCCHHHHHHTTCEEEECCSCTTCHHHHHHHHHTTCSC
T ss_pred             cCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEeccCCCCccccCHHHHHhCCcEEEEeccChHHHHHHHHHHHcCCCC
Confidence            234999999999987799999999999999999997654  445667778899999999988888899999999999998


Q ss_pred             CCCceEEEecCChhhHHHHHHHHhcCC-CceEEEEe
Q 018075          326 VKPLITHRFGFTQKEIEDAFEISAQGG-NAIKVMFN  360 (361)
Q Consensus       326 ~~~~~~~~~~l~~~~~~~a~~~l~~~~-~~gkvvi~  360 (361)
                      +.+.++++|+|  +++++|++.+.+++ ..+|++++
T Consensus       330 ~~~~i~~~~~l--~~~~~A~~~~~~~~~~~~kvv~~  363 (370)
T 4ej6_A          330 IDRMISRRISL--DEAPDVISNPAAAGEVKVLVIPS  363 (370)
T ss_dssp             CGGGEEEEECG--GGHHHHHHSCCCTTCSEEEECCC
T ss_pred             hhHcEEEEEEH--HHHHHHHHHHHcCCCCeEEEEEc
Confidence            88999999999  99999999998876 45788765

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=4.9e-58  Score=422.94  Aligned_cols=335  Identities=27%  Similarity=0.478  Sum_probs=299.6

Q ss_pred             ceEEEEeeCCceEEEEecCCCC-CCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCC
Q 018075           15 NMAAWLLGIKTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE   93 (361)
Q Consensus        15 ~~~~~~~~~~~l~~~~~~~p~~-~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   93 (361)
                      |+++++.+++.++++|+|+|++ +||||||||+++|||++|++.+.|..    ...+|+++|||++|+|+++|++|++++
T Consensus         1 MkAvv~~~~g~l~v~e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~~----~~~~P~i~G~E~~G~V~~vG~~V~~~~   76 (346)
T 4a2c_A            1 MKSVVNDTDGIVRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNG----AHYYPITLGHEFSGYIDAVGSGVDDLH   76 (346)
T ss_dssp             CEEEEECSSSCEEEEECCCCCCCSTTEEEEEEEEEECCTTHHHHHHSSC----SSSSSBCCCCEEEEEEEEECTTCCSCC
T ss_pred             CCEEEEecCCCEEEEEEeCCCCCCcCEEEEEEEEEEECHHHHHHHcCCC----CCCCCccccEEEEEEEEEECCCccccc
Confidence            5777777889999999999984 79999999999999999998887632    347899999999999999999999999


Q ss_pred             CCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHHHHHHHHh
Q 018075           94 VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRR  173 (361)
Q Consensus        94 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~~  173 (361)
                      +||+|++.+...|+.|.+|..|++++|++..+++. ..+|+|+||++++++.++++|+++++++||++.++++++++++.
T Consensus        77 ~GdrV~~~~~~~~g~c~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~~~~~~~~  155 (346)
T 4a2c_A           77 PGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGS-RRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGLHAFHL  155 (346)
T ss_dssp             TTCEEEECCEECCSCSHHHHTTCGGGCSSCEEBTT-TBCCSSBSEEEEEGGGEEECCTTSCGGGGGGHHHHHHHHHHHHH
T ss_pred             CCCeEEeeeccCCCCcccccCCccccCCCcccccC-CCCcccccccccchheEEECCCCCCHHHHHhchHHHHHHHHHHH
Confidence            99999999999999999999999999999888774 46899999999999999999999999999988888888888888


Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCcc
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      .++++|++|||+|+|++|++++|+|+.+|+.++++++++++|+++++++|+++++++.+  .+..+..+.+.  .+.++|
T Consensus       156 ~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~--~~~~~~~~~~~--~~~g~d  231 (346)
T 4a2c_A          156 AQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSE--MSAPQMQSVLR--ELRFNQ  231 (346)
T ss_dssp             TTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTT--SCHHHHHHHHG--GGCSSE
T ss_pred             hccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCC--CCHHHHHHhhc--ccCCcc
Confidence            99999999999999999999999999999988899999999999999999999998654  45666665554  367899


Q ss_pred             EEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcce---echHhhhcCcEEEEeecC------CCcHHHHHHHHHcCCC
Q 018075          254 VSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTV---ALTPAAAREVDVIGIFRY------RSTWPLCIEFLRSGKI  324 (361)
Q Consensus       254 ~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~---~~~~~~~~~~~i~~~~~~------~~~~~~~~~~l~~g~~  324 (361)
                      +|||++|.+..++.++++++++|+++.+|.......+   +...++.+++++.|++..      .++++++++++++|++
T Consensus       232 ~v~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~~~~~~~~~~~~~~~~~~~l~~~g~l  311 (346)
T 4a2c_A          232 LILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKL  311 (346)
T ss_dssp             EEEECSCSHHHHHHHHHHCCTTCEEEECCCCSSCEEECHHHHHHHHHHTCEEEECCTTCCSSTTCHHHHHHHHHHHTTCS
T ss_pred             cccccccccchhhhhhheecCCeEEEEEeccCCCccccccCHHHHhhceeEEEEEeccccCcchHHHHHHHHHHHHcCCC
Confidence            9999999988999999999999999999977654333   334577899999998643      4578999999999999


Q ss_pred             CCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075          325 DVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  360 (361)
Q Consensus       325 ~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~  360 (361)
                      ++++.++++|+|  +++++|++.+++++..||+||+
T Consensus       312 ~~~~lI~~~~~l--~~~~~A~~~l~~~~~~GKvVl~  345 (346)
T 4a2c_A          312 SLEPLIAHRGSF--ESFAQAVRDIARNAMPGKVLLI  345 (346)
T ss_dssp             CCGGGEEEEECH--HHHHHHHHHHTTSCCCSEEEEC
T ss_pred             CCCccEeEEEeH--HHHHHHHHHHHcCCCceEEEEE
Confidence            888999999999  9999999999999999999985

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=1.1e-57  Score=420.58  Aligned_cols=342  Identities=32%  Similarity=0.580  Sum_probs=285.0

Q ss_pred             CcccceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCC
Q 018075           11 DKNQNMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEV   89 (361)
Q Consensus        11 ~~~~~~~~~~~~~~-~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   89 (361)
                      |+++|+++++.+++ .++++++|.|+|+++||||||.++|||++|++...|.........+|+++|||++|+|+++|++|
T Consensus         1 ~m~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v   80 (348)
T 2d8a_A            1 MSEKMVAIMKTKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPGV   80 (348)
T ss_dssp             --CEEEEEEECSSSSSCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCTTHHHHCCSSEECCCEEEEEEEEECTTC
T ss_pred             CCCcceEEEEECCCCCEEEEECCCCCCCcCEEEEEEeEEEecHHHHHHHcCCCCCcccCCCCCccCccceEEEEEECCCC
Confidence            45567777777877 89999999999999999999999999999999887721110113679999999999999999999


Q ss_pred             CCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHHHHH
Q 018075           90 KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVH  169 (361)
Q Consensus        90 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~  169 (361)
                      ++|++||||++.+..+|++|.+|+.|++++|++..+++. ...|+|+||++++++.++++|+++++++||+++++++||+
T Consensus        81 ~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~ta~~  159 (348)
T 2d8a_A           81 EGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGV-DTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNAVD  159 (348)
T ss_dssp             CSCCTTCEEEECCEECCSCCC------------CEETTT-SSCCSSBSEEEEEGGGEEECCTTSCHHHHTTHHHHHHHHH
T ss_pred             CcCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCeecC-CCCCcCcceEEeChHHeEECCCCCCHHHHHhhhHHHHHHH
Confidence            999999999999989999999999999999998877653 3679999999999999999999999999998888999999


Q ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcC
Q 018075          170 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       170 ~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      +++++++ +|++|||+|+|++|++++|+|+.+|+..|+++++++++.++++++|++.++++..  .++.+.++++.  .+
T Consensus       160 ~l~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~--~~~~~~v~~~~--~g  234 (348)
T 2d8a_A          160 TVLAGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFE--EDVVKEVMDIT--DG  234 (348)
T ss_dssp             HHTTSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEECTTT--SCHHHHHHHHT--TT
T ss_pred             HHHhcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCC--cCHHHHHHHHc--CC
Confidence            9977888 9999999999999999999999999956888999999999999999999887543  46666665543  35


Q ss_pred             CCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceec-hHhhhcCcEEEEeecC--CCcHHHHHHHHHcCCCCC
Q 018075          250 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVAL-TPAAAREVDVIGIFRY--RSTWPLCIEFLRSGKIDV  326 (361)
Q Consensus       250 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~i~~~~~~--~~~~~~~~~~l~~g~~~~  326 (361)
                      .++|+|||++|.+..++.++++|+++|+++.+|.......++. ..++.+++++.+++..  .++++++++++++|++++
T Consensus       235 ~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~g~i~~  314 (348)
T 2d8a_A          235 NGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWYTVSRLLQSGKLNL  314 (348)
T ss_dssp             SCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHHHHTTTTTCEEEECCCCCSHHHHHHHHHHHHHTCCCC
T ss_pred             CCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCcccCchHHHHhCCcEEEEecCCCcHHHHHHHHHHHHcCCCCh
Confidence            6899999999987789999999999999999997665445555 6677899999997654  467899999999999888


Q ss_pred             CCceEEEec-CChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          327 KPLITHRFG-FTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       327 ~~~~~~~~~-l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      ++.++++|+ |  +++++|++.+++ ...+|+|+++
T Consensus       315 ~~~i~~~~~gl--~~~~~A~~~~~~-~~~gKvvi~~  347 (348)
T 2d8a_A          315 DPIITHKYKGF--DKYEEAFELMRA-GKTGKVVFML  347 (348)
T ss_dssp             TTTEEEEEESS--TTHHHHHHHHHT-TCCSEEEEEC
T ss_pred             HHhheeeCCCH--HHHHHHHHHHhC-CCceEEEEee
Confidence            899999999 9  999999999987 5789999874

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=3.5e-57  Score=421.62  Aligned_cols=343  Identities=25%  Similarity=0.392  Sum_probs=295.4

Q ss_pred             cCCcccceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCC
Q 018075            9 EGDKNQNMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGS   87 (361)
Q Consensus         9 ~~~~~~~~~~~~~~~~-~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   87 (361)
                      ..|+++|+++++.+++ +++++++|.|+|+++||||||+++|||++|++.+.|...   ...+|+++|||++|+|+++|+
T Consensus         3 ~~~~~tmkA~v~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~~P~v~GhE~~G~V~~vG~   79 (378)
T 3uko_A            3 QGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGE   79 (378)
T ss_dssp             TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTCCT---TCCSSBCCCCEEEEEEEEECT
T ss_pred             cccceeeEEEEEecCCCccEEEEecCCCCCCCeEEEEEEEeecCHHHHHHhcCCCC---CCCCCccCCccceEEEEEeCC
Confidence            3577888888888875 499999999999999999999999999999999887532   246899999999999999999


Q ss_pred             CCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCcccc---CC------------------CCCCCceeEEEEecCCce
Q 018075           88 EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF---GS------------------PPTNGSLAHKVVHPAKLC  146 (361)
Q Consensus        88 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------------------~~~~g~~~~~~~~~~~~~  146 (361)
                      +|++|++||||+..+..+|+.|.+|+.|++++|++....   +.                  ....|+|+||++++++.+
T Consensus        80 ~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~  159 (378)
T 3uko_A           80 GVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSV  159 (378)
T ss_dssp             TCCSCCTTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBSEEEEEGGGE
T ss_pred             CCCcCCCCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEeEEEechhhe
Confidence            999999999999999999999999999999999986431   10                  112379999999999999


Q ss_pred             EECCCCCCcccccccc-hhHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCC
Q 018075          147 YKLPDNVSLEEGAMCE-PLSVGVHACR-RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA  224 (361)
Q Consensus       147 ~~vP~~~~~~~aa~~~-~~~~a~~~l~-~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~  224 (361)
                      +++|+++++++||++. ++.+||+++. .+++++|++|||+|+|++|++++|+||.+|+.+|++++.+++|+++++++|+
T Consensus       160 ~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa  239 (378)
T 3uko_A          160 AKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGV  239 (378)
T ss_dssp             EECCTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTC
T ss_pred             EECCCCCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCC
Confidence            9999999999999775 7889999884 5899999999999999999999999999999779999999999999999999


Q ss_pred             CEEeecCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCC-CEEEEEccCCCCcc--eechHhhhcCcE
Q 018075          225 DETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMT--VALTPAAAREVD  301 (361)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~--~~~~~~~~~~~~  301 (361)
                      ++++++.....++.+.++++.   ++++|+|||++|++..++.++++|+++ |+++.+|.......  +....+. ++.+
T Consensus       240 ~~vi~~~~~~~~~~~~i~~~~---~gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~-~~~~  315 (378)
T 3uko_A          240 NEFVNPKDHDKPIQEVIVDLT---DGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLV-TGRV  315 (378)
T ss_dssp             CEEECGGGCSSCHHHHHHHHT---TSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHH-TTCE
T ss_pred             cEEEccccCchhHHHHHHHhc---CCCCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCCCCccccCHHHHh-cCcE
Confidence            999887543467777776654   349999999999977999999999996 99999997653323  3333344 4889


Q ss_pred             EEEeecC----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          302 VIGIFRY----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       302 i~~~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      +.|+...    .++++++++++++|++++.+.++++|+|  +++++|++.+.+++.. |+|+++
T Consensus       316 i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l--~~~~~A~~~~~~g~~~-Kvvi~~  376 (378)
T 3uko_A          316 WKGTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTL--GEINKAFDLLHEGTCL-RCVLDT  376 (378)
T ss_dssp             EEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEG--GGHHHHHHHTTCTTCS-EEEEET
T ss_pred             EEEEEecCCCchHHHHHHHHHHHcCCCChhHheeeEeeH--HHHHHHHHHHHCCCce-EEEEec
Confidence            9987643    4678999999999999888899999999  9999999999998765 999875

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=1.4e-55  Score=410.29  Aligned_cols=340  Identities=24%  Similarity=0.381  Sum_probs=290.3

Q ss_pred             CCcccceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCC
Q 018075           10 GDKNQNMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSE   88 (361)
Q Consensus        10 ~~~~~~~~~~~~~~~-~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   88 (361)
                      ..|++|+++++.+++ +++++++|.|+|+++||||||+++|||++|++...|...    ..+|+++|||++|+|+++|++
T Consensus         5 ~~p~~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~----~~~P~v~GhE~~G~V~~vG~~   80 (373)
T 1p0f_A            5 GKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIP----SKFPVILGHEAVGVVESIGAG   80 (373)
T ss_dssp             TSCEEEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC----CCSSBCCCCCEEEEEEEECTT
T ss_pred             CCcceeEEEEEEcCCCCeeEEEeeCCCCCCCeEEEEEeEEeecchhHHHhcCCCC----CCCCcccCcCceEEEEEECCC
Confidence            356677887777775 699999999999999999999999999999998877432    467999999999999999999


Q ss_pred             CCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCcccc---CC-----------------CCCCCceeEEEEecCCceEE
Q 018075           89 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF---GS-----------------PPTNGSLAHKVVHPAKLCYK  148 (361)
Q Consensus        89 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----------------~~~~g~~~~~~~~~~~~~~~  148 (361)
                      |++|++||||++.+..+|++|.+|+.|++++|++....   +.                 ....|+|+||++++++.+++
T Consensus        81 v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~  160 (373)
T 1p0f_A           81 VTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAK  160 (373)
T ss_dssp             CCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEE
T ss_pred             CCccCCCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccccCCccccccCCcccccccCCccceeEEEEchhhEEE
Confidence            99999999999999899999999999999999986431   10                 01359999999999999999


Q ss_pred             CCCCCCcccccccc-hhHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCE
Q 018075          149 LPDNVSLEEGAMCE-PLSVGVHACR-RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE  226 (361)
Q Consensus       149 vP~~~~~~~aa~~~-~~~~a~~~l~-~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~  226 (361)
                      +|++++++ ||+++ ++.|||+++. .+++++|++|||+|+|++|++++|+||.+|+.+|+++++++++.++++++|+++
T Consensus       161 iP~~l~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~  239 (373)
T 1p0f_A          161 IDPKAPLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATE  239 (373)
T ss_dssp             ECTTCCGG-GGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSE
T ss_pred             CCCCCChh-hhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcE
Confidence            99999999 88775 7899999885 588999999999999999999999999999977999999999999999999999


Q ss_pred             EeecCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCC-CEEEEEccCCC--CcceechHhhhcCcEEE
Q 018075          227 TAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKT--EMTVALTPAAAREVDVI  303 (361)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~  303 (361)
                      ++++.+...++.+.++++.   +.++|+|||++|.+..++.++++|+++ |+++.+|....  ...++...+..++ ++.
T Consensus       240 vi~~~~~~~~~~~~i~~~t---~gg~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~  315 (373)
T 1p0f_A          240 CLNPKDYDKPIYEVICEKT---NGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGR-SLK  315 (373)
T ss_dssp             EECGGGCSSCHHHHHHHHT---TSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTC-EEE
T ss_pred             EEecccccchHHHHHHHHh---CCCCCEEEECCCCHHHHHHHHHHHhcCCCEEEEEccCCCCCccccCHHHhccCc-eEE
Confidence            8876532245666666553   348999999999877899999999999 99999996653  2344455566677 888


Q ss_pred             EeecC---CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          304 GIFRY---RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       304 ~~~~~---~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      +++..   .++++++++++++|++++.+.++++|+|  +++++|++.+++++. +|+|+++
T Consensus       316 g~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~~-~kvvi~~  373 (373)
T 1p0f_A          316 GSVFGGFKGEEVSRLVDDYMKKKINVNFLVSTKLTL--DQINKAFELLSSGQG-VRSIMIY  373 (373)
T ss_dssp             ECSGGGCCGGGHHHHHHHHHTTSSCGGGGEEEEECG--GGHHHHHHHTTTSSC-SEEEEEC
T ss_pred             eeccCCcCHHHHHHHHHHHHcCCCCchheEEEEeeH--HHHHHHHHHHHCCCc-ceEEEeC
Confidence            87643   3689999999999999777888999999  999999999988864 7999875

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=100.00  E-value=1e-56  Score=413.28  Aligned_cols=336  Identities=32%  Similarity=0.582  Sum_probs=294.7

Q ss_pred             ceEEEEeeCCc-eEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCC
Q 018075           15 NMAAWLLGIKT-LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE   93 (361)
Q Consensus        15 ~~~~~~~~~~~-l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   93 (361)
                      |+++++.+++. ++++++|.|+|+++||+|||.++|||++|++...|.........+|+++|||++|+|+++|++|++|+
T Consensus         1 Mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~   80 (343)
T 2dq4_A            1 MRALAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQ   80 (343)
T ss_dssp             CEEEEECSSSSSCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTCHHHHHHCCSSEECCCEEEEEEEEECTTCCSSC
T ss_pred             CeEEEEeCCCCcEEEEeccCCCCCCCEEEEEEEEEeechhhHHHHcCCCCccccCCCCCcCCccceEEEEEECCCCCcCC
Confidence            45667777766 99999999999999999999999999999998877432100246799999999999999999999999


Q ss_pred             CCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHHHHHHHH-
Q 018075           94 VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACR-  172 (361)
Q Consensus        94 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~-  172 (361)
                      +||||+..+..+|++|.+|+.|++++|++..+++. ...|+|+||++++++.++++|+++++++||++.++++||++++ 
T Consensus        81 vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~ta~~~l~~  159 (343)
T 2dq4_A           81 VGDHVSLESHIVCHACPACRTGNYHVCLNTQILGV-DRDGGFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAVHTVYA  159 (343)
T ss_dssp             TTCEEEECCEECCSCSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEEEGGGEEEECTTSCHHHHTTHHHHHHHHHHHHS
T ss_pred             CCCEEEECCCCCCCCChhhhCcCcccCCCcceecC-CCCCcceeEEEEchHHeEECCCCCCHHHHHhhhHHHHHHHHHHH
Confidence            99999999888999999999999999999876653 3579999999999999999999999999998888999999998 


Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCc
Q 018075          173 RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       173 ~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      .+++ +|++|||+|+|++|++++|+|+.+|+..|+++++++++.++++++ ++.++++..  .++.+.++++.   +.++
T Consensus       160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~~~--~~~~~~~~~~~---~~g~  232 (343)
T 2dq4_A          160 GSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNPLE--EDLLEVVRRVT---GSGV  232 (343)
T ss_dssp             TTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECTTT--SCHHHHHHHHH---SSCE
T ss_pred             hCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCcCc--cCHHHHHHHhc---CCCC
Confidence            7889 999999999999999999999999995588999999999999999 998887643  46666666553   5689


Q ss_pred             cEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceec-hHhhhcCcEEEEeecC--CCcHHHHHHHHHcCCCCCCCc
Q 018075          253 DVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVAL-TPAAAREVDVIGIFRY--RSTWPLCIEFLRSGKIDVKPL  329 (361)
Q Consensus       253 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~i~~~~~~--~~~~~~~~~~l~~g~~~~~~~  329 (361)
                      |+|||++|.+..++.++++|+++|+++.+|.......++. ..++.+++++.|+...  .++++++++++++|++++++.
T Consensus       233 D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~g~~~~~~~  312 (343)
T 2dq4_A          233 EVLLEFSGNEAAIHQGLMALIPGGEARILGIPSDPIRFDLAGELVMRGITAFGIAGRRLWQTWMQGTALVYSGRVDLSPL  312 (343)
T ss_dssp             EEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSCEEECHHHHTGGGTCEEEECCSCCTTHHHHHHHHHHHHTSSCCGGG
T ss_pred             CEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCceeCcHHHHHhCceEEEEeecCCCHHHHHHHHHHHHcCCCChHHh
Confidence            9999999986689999999999999999997655555666 6678899999998654  667999999999999877899


Q ss_pred             eEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          330 ITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       330 ~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      ++++|+|  +++++|++.+++++. ||+|+++
T Consensus       313 i~~~~~l--~~~~~A~~~~~~~~~-gKvv~~~  341 (343)
T 2dq4_A          313 LTHRLPL--SRYREAFGLLASGQA-VKVILDP  341 (343)
T ss_dssp             EEEEEEG--GGHHHHHHHHHHSSC-SEEEEET
T ss_pred             eeEEecH--HHHHHHHHHHhcCCc-eEEEEee
Confidence            9999999  999999999998877 9999874

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=1.1e-55  Score=411.41  Aligned_cols=341  Identities=26%  Similarity=0.419  Sum_probs=292.0

Q ss_pred             CCcccceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCC
Q 018075           10 GDKNQNMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSE   88 (361)
Q Consensus        10 ~~~~~~~~~~~~~~~-~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   88 (361)
                      ..|++|+++++.+++ +++++++|.|+|+++||+|||.++|||++|++...|. .   ...+|+++|||++|+|+++|++
T Consensus         4 ~~p~~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~-~---~~~~P~v~GhE~~G~V~~vG~~   79 (376)
T 1e3i_A            4 GKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK-K---KALFPVVLGHECAGIVESVGPG   79 (376)
T ss_dssp             TSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTT-S---CCCSSBCCCCEEEEEEEEECTT
T ss_pred             CCChheeEEEEecCCCCeEEEEeeCCCCCCCeEEEEEeEEeEchhhHHHhcCC-C---CCCCCcccCccccEEEEEECCC
Confidence            356778888888775 6999999999999999999999999999999988764 1   1367999999999999999999


Q ss_pred             CCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCcc----c---cCCC-----------------CCCCceeEEEEecCC
Q 018075           89 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMR----F---FGSP-----------------PTNGSLAHKVVHPAK  144 (361)
Q Consensus        89 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~-----------------~~~g~~~~~~~~~~~  144 (361)
                      |++|++||||++.+..+|++|.+|+.|++++|++..    +   ++..                 ...|+|+||++++++
T Consensus        80 v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~  159 (376)
T 1e3i_A           80 VTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEA  159 (376)
T ss_dssp             CCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGG
T ss_pred             CccCCCCCEEEECCcCCCCCCccccCCCcccCcCcCccccccccccccccCccccccCCcccccccCCccceeEEEeccc
Confidence            999999999999998999999999999999999754    1   0110                 125999999999999


Q ss_pred             ceEECCCCCCcccccccc-hhHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc
Q 018075          145 LCYKLPDNVSLEEGAMCE-PLSVGVHACR-RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL  222 (361)
Q Consensus       145 ~~~~vP~~~~~~~aa~~~-~~~~a~~~l~-~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l  222 (361)
                      .++++|+++++++||++. ++.+||+++. .+++++|++|||+|+|++|++++|+||.+|+.+|+++++++++.++++++
T Consensus       160 ~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l  239 (376)
T 1e3i_A          160 NLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKAL  239 (376)
T ss_dssp             GEEECCTTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT
T ss_pred             cEEECCCCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh
Confidence            999999999999998775 7899999885 58999999999999999999999999999997799999999999999999


Q ss_pred             CCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCC-CEEEEEccCCCCcceechHhhhcCcE
Q 018075          223 GADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTPAAAREVD  301 (361)
Q Consensus       223 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~  301 (361)
                      |++.++++.+...++.+.++++.   +.++|+|||++|.+..++.++++|+++ |+++.+|.......++...+..++ +
T Consensus       240 Ga~~vi~~~~~~~~~~~~v~~~~---~~g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~-~  315 (376)
T 1e3i_A          240 GATDCLNPRELDKPVQDVITELT---AGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVILGR-S  315 (376)
T ss_dssp             TCSEEECGGGCSSCHHHHHHHHH---TSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSEEEEEHHHHHTTC-E
T ss_pred             CCcEEEccccccchHHHHHHHHh---CCCccEEEECCCCHHHHHHHHHHhhcCCCEEEEECCCCCccccCHHHhhccC-e
Confidence            99998876532245666666554   348999999999877899999999999 999999985444455555667777 9


Q ss_pred             EEEeecC----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          302 VIGIFRY----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       302 i~~~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      +.++...    .++++++++++++|++++.+.++++|+|  +++++|++.+++++ .+|+|+++
T Consensus       316 i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~-~~Kvvi~~  376 (376)
T 1e3i_A          316 INGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPF--ESINDAIDLMKEGK-SIRTILTF  376 (376)
T ss_dssp             EEECSGGGCCHHHHHHHHHHHHHTTSSCGGGGEEEEEEG--GGHHHHHHHHHTTC-CSEEEEEC
T ss_pred             EEEEecCCCCcHHHHHHHHHHHHcCCCCcHHhEeeeecH--HHHHHHHHHHhcCC-cceEEEeC
Confidence            9887643    4578999999999999777889999999  99999999999886 47999875

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.2e-55  Score=409.02  Aligned_cols=341  Identities=24%  Similarity=0.397  Sum_probs=291.7

Q ss_pred             CCcccceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeecCcchhh-hhcccccccccCCCCcccCcceeEEEEEeCC
Q 018075           10 GDKNQNMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVH-HFKTMRCANFIVKKPMVIGHECAGIIEEVGS   87 (361)
Q Consensus        10 ~~~~~~~~~~~~~~~-~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~-~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   87 (361)
                      ..|++|+++++.+++ +++++++|.|+|+++||+|||.++|||++|++ ...|...    ..+|+++|||++|+|+++|+
T Consensus         4 ~~~~~mka~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~----~~~P~v~GhE~~G~V~~vG~   79 (374)
T 1cdo_A            4 GKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHK----DGFPVVLGHEGAGIVESVGP   79 (374)
T ss_dssp             TSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCT----TSCSEECCCCEEEEEEEECT
T ss_pred             CCcceeEEEEEecCCCCeEEEEeeCCCCCCCEEEEEEeEEeechhhHHHHhCCCCC----CCCCcccCccceEEEEEECC
Confidence            456778888877775 69999999999999999999999999999999 7876432    46799999999999999999


Q ss_pred             CCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCcccc---CCC-----------------CCCCceeEEEEecCCceE
Q 018075           88 EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF---GSP-----------------PTNGSLAHKVVHPAKLCY  147 (361)
Q Consensus        88 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----------------~~~g~~~~~~~~~~~~~~  147 (361)
                      +|++|++||||++.+..+|++|.+|+.|++++|++....   +..                 ...|+|+||++++++.++
T Consensus        80 ~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~  159 (374)
T 1cdo_A           80 GVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVA  159 (374)
T ss_dssp             TCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEE
T ss_pred             CCccCCCCCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccccCCccccccCCcccccccCCccceeEEEEchhheE
Confidence            999999999999999889999999999999999986532   110                 024999999999999999


Q ss_pred             ECCCCCCcccccccc-hhHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCC
Q 018075          148 KLPDNVSLEEGAMCE-PLSVGVHACR-RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD  225 (361)
Q Consensus       148 ~vP~~~~~~~aa~~~-~~~~a~~~l~-~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~  225 (361)
                      ++|+++++++||++. ++.+||+++. .+++++|++|||+|+|++|++++|+|+.+|+.+|+++++++++.++++++|++
T Consensus       160 ~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~  239 (374)
T 1cdo_A          160 KIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGAT  239 (374)
T ss_dssp             ECCTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCC
T ss_pred             ECCCCCCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCc
Confidence            999999999999775 7899999885 58999999999999999999999999999997799999999999999999999


Q ss_pred             EEeecCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCC-CEEEEEccCCC-CcceechHhhhcCcEEE
Q 018075          226 ETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKT-EMTVALTPAAAREVDVI  303 (361)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~-~~~~~~~~~~~~~~~i~  303 (361)
                      .++++.+...++.+.++++.   +.++|+|||++|.+..++.++++|+++ |+++.+|.... ...++...+..++ ++.
T Consensus       240 ~vi~~~~~~~~~~~~~~~~~---~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~-~i~  315 (374)
T 1cdo_A          240 DFVNPNDHSEPISQVLSKMT---NGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGR-TWK  315 (374)
T ss_dssp             EEECGGGCSSCHHHHHHHHH---TSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHTTC-EEE
T ss_pred             eEEeccccchhHHHHHHHHh---CCCCCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcCCCCCCcccCHHHHhcCC-eEE
Confidence            98876532245666666554   348999999999877899999999999 99999997654 3344455566677 888


Q ss_pred             EeecC----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          304 GIFRY----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       304 ~~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      ++...    .++++++++++++|++++.+.++++|+|  +++++|++.+++++. +|+|+++
T Consensus       316 g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l--~~~~~A~~~~~~~~~-~kvvi~~  374 (374)
T 1cdo_A          316 GSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPL--ESVNDAIDLMKHGKC-IRTVLSL  374 (374)
T ss_dssp             ECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEG--GGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             EEecCCCCcHHHHHHHHHHHHcCCCChHHheeeEecH--HHHHHHHHHHHCCCe-eEEEEeC
Confidence            87643    4578999999999999777888999999  999999999998865 7999875

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=9.3e-56  Score=406.53  Aligned_cols=332  Identities=27%  Similarity=0.390  Sum_probs=292.4

Q ss_pred             ceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCC
Q 018075           15 NMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE   93 (361)
Q Consensus        15 ~~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   93 (361)
                      |+++++.++ ++++++++|.|+|++|||||||+++|||++|++..+|...  ....+|+++|||++|+|+++|++|++|+
T Consensus         3 MkA~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~~P~v~G~E~~G~V~~vG~~v~~~~   80 (340)
T 3s2e_A            3 MKAAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWP--VKPTLPFIPGHEGVGYVSAVGSGVSRVK   80 (340)
T ss_dssp             EEEEEBCSTTSCCEEEEEECCCCCTTCEEEEEEEEEECHHHHHHHHTCSS--SCCCSSBCCCSEEEEEEEEECSSCCSCC
T ss_pred             eEEEEEecCCCCCEEEEccCCCCCCCeEEEEEEEeccCHHHHHHHcCCCC--CCCCCCcccCCcceEEEEEECCCCCcCC
Confidence            455555555 5699999999999999999999999999999999887542  1246899999999999999999999999


Q ss_pred             CCCEEE-ecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHH
Q 018075           94 VGDRVA-LEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHAC  171 (361)
Q Consensus        94 ~Gd~V~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l  171 (361)
                      +||||+ ..+..+|+.|.+|+.|++++|++....+. ..+|+|+||++++++.++++|+++++++||.+ .++.+||+++
T Consensus        81 vGdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l  159 (340)
T 3s2e_A           81 EGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGY-SVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKGL  159 (340)
T ss_dssp             TTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEECTTTSEECCTTSCHHHHGGGGTHHHHHHHHH
T ss_pred             CCCEEEecCCCCCCCCChHHhCcCcccCccccccCC-CCCCcceeEEEechHHEEECCCCCCHHHhhcccchhHHHHHHH
Confidence            999995 45677899999999999999999877764 46899999999999999999999999999965 4788999999


Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCC
Q 018075          172 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       172 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (361)
                      +..++++|++|||+|+|++|++++|+|+.+|+ +|+++++++++.++++++|++.++++..  .++.+.+++   +.+ +
T Consensus       160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~i~~~~--~~~~~~~~~---~~g-~  232 (340)
T 3s2e_A          160 KVTDTRPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGAEVAVNARD--TDPAAWLQK---EIG-G  232 (340)
T ss_dssp             HTTTCCTTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEETTT--SCHHHHHHH---HHS-S
T ss_pred             HHcCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCCEEEeCCC--cCHHHHHHH---hCC-C
Confidence            88999999999999999999999999999999 7999999999999999999999988643  566666555   234 8


Q ss_pred             ccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCCCce
Q 018075          252 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLI  330 (361)
Q Consensus       252 ~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~  330 (361)
                      +|++||++|+...++.++++|+++|+++.+|.......++...++.+++++.++... .++++++++++++|+++  +. 
T Consensus       233 ~d~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~--~~-  309 (340)
T 3s2e_A          233 AHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRGSIVGTRSDLQESLDFAAHGDVK--AT-  309 (340)
T ss_dssp             EEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSCC--CC-
T ss_pred             CCEEEEeCCCHHHHHHHHHHhccCCEEEEeCCCCCCCCCCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHhCCCC--ce-
Confidence            999999999888999999999999999999987766667777788999999998776 67899999999999994  44 


Q ss_pred             EEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          331 THRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       331 ~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      .+.++|  +++++|++.+++++..||+|+++
T Consensus       310 ~~~~~l--~~~~~A~~~~~~~~~~Gkvvv~~  338 (340)
T 3s2e_A          310 VSTAKL--DDVNDVFGRLREGKVEGRVVLDF  338 (340)
T ss_dssp             EEEECG--GGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             EEEEeH--HHHHHHHHHHHcCCCceEEEEec
Confidence            467888  99999999999999999999975

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=4.9e-56  Score=410.17  Aligned_cols=337  Identities=25%  Similarity=0.321  Sum_probs=291.1

Q ss_pred             ceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeecCcchhh-hhcccccccccCCCCcccCcceeEEEEEeCCCCCCCC
Q 018075           15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVH-HFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE   93 (361)
Q Consensus        15 ~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~-~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   93 (361)
                      |+++++.+++.++++++|.|+|+++||+|||+++|||++|++ +..|..    +..+|+++|||++|+|+++|++|++|+
T Consensus         1 MkA~~~~~~~~~~~~e~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~----~~~~p~v~G~E~~G~V~~vG~~v~~~~   76 (352)
T 3fpc_A            1 MKGFAMLSIGKVGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAI----GERHNMILGHEAVGEVVEVGSEVKDFK   76 (352)
T ss_dssp             CEEEEEEETTEEEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTT----CCCSSEECCCEEEEEEEEECTTCCSCC
T ss_pred             CeEEEEccCCCceEEeCCCCCCCCCeEEEEeCEEeEcccchHHHhCCCC----CCCCCcccCCcceEEEEEECCCCCcCC
Confidence            577788899999999999999999999999999999999998 446543    246799999999999999999999999


Q ss_pred             CCCEEEecCCcCCCCCccccCCCCCCCCCcccc--CCCCCCCceeEEEEecCC--ceEECCCCCCccccccc-chhHHHH
Q 018075           94 VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF--GSPPTNGSLAHKVVHPAK--LCYKLPDNVSLEEGAMC-EPLSVGV  168 (361)
Q Consensus        94 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~~~--~~~~vP~~~~~~~aa~~-~~~~~a~  168 (361)
                      +||||++.+..+|+.|.+|+.|++..|......  -.....|+|+||+++++.  .++++|+++++++||++ .++.+||
T Consensus        77 vGdrV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~  156 (352)
T 3fpc_A           77 PGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGF  156 (352)
T ss_dssp             TTCEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBTTTBCCSSBSCEEESSHHHHCEECCTTSCHHHHTTTTTHHHHHH
T ss_pred             CCCEEEEccccCCCCchhhcCCCcCCccccccccccccCCCCcccceEEeccccCeEEECCCCCCHHHHhhccchhHHHH
Confidence            999999999999999999999999888765321  123468999999999976  89999999999999977 5889999


Q ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhc
Q 018075          169 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       169 ~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      ++++.+++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|.++++++|++.++++..  .++.+.++++.  .
T Consensus       157 ~al~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~--~~~~~~v~~~t--~  232 (352)
T 3fpc_A          157 HGAELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYKN--GDIVEQILKAT--D  232 (352)
T ss_dssp             HHHHHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECGGG--SCHHHHHHHHT--T
T ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcCCC--cCHHHHHHHHc--C
Confidence            9998899999999999999999999999999999977999999999999999999999887643  56766666554  3


Q ss_pred             CCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechH----hhhcCcEEEEeecC--CCcHHHHHHHHHcC
Q 018075          249 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTP----AAAREVDVIGIFRY--RSTWPLCIEFLRSG  322 (361)
Q Consensus       249 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~----~~~~~~~i~~~~~~--~~~~~~~~~~l~~g  322 (361)
                      +.++|+|||++|++..++.++++|+++|+++.+|.......++...    ...++.++.++...  .++++++++++++|
T Consensus       233 g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~g  312 (352)
T 3fpc_A          233 GKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCPGGRLRMERLIDLVFYK  312 (352)
T ss_dssp             TCCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSCSEEEEETTTTGGGTBCEEEEEBCCCCHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEECCCChHHHHHHHHHHhcCCEEEEecccCCCCceecchhHhhhhccccEEEEeeccCchhHHHHHHHHHHcC
Confidence            6689999999998778999999999999999999765443333322    33578889887654  56799999999999


Q ss_pred             CCCCCCceEEEec-CChhhHHHHHHHHhcCCC-ceEEEEeC
Q 018075          323 KIDVKPLITHRFG-FTQKEIEDAFEISAQGGN-AIKVMFNL  361 (361)
Q Consensus       323 ~~~~~~~~~~~~~-l~~~~~~~a~~~l~~~~~-~gkvvi~~  361 (361)
                      ++++.+.++++|+ |  +++++|++.+++++. .+|+|+++
T Consensus       313 ~i~~~~~i~~~~~gl--~~~~~A~~~~~~~~~~~~Kvvi~~  351 (352)
T 3fpc_A          313 RVDPSKLVTHVFRGF--DNIEKAFMLMKDKPKDLIKPVVIL  351 (352)
T ss_dssp             SCCGGGGEEEEEEST--THHHHHHHHHHSCCTTCSEEEEEC
T ss_pred             CCChhHhheeeCCCH--HHHHHHHHHHHhCCCCcEEEEEEe
Confidence            9988888999999 9  999999999998754 48999975

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4.7e-56  Score=411.11  Aligned_cols=336  Identities=26%  Similarity=0.387  Sum_probs=287.3

Q ss_pred             CcccceEEEEeeCC-ceEEEEecCCC-CCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCC
Q 018075           11 DKNQNMAAWLLGIK-TLKIQPYHLPT-LGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSE   88 (361)
Q Consensus        11 ~~~~~~~~~~~~~~-~l~~~~~~~p~-~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   88 (361)
                      .+++|+++++.+++ +++++++|.|+ |+++||+|||.++|||++|++...|.........+|+++|||++|+|+++|++
T Consensus        12 ~~~~mka~~~~~~g~~l~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~   91 (359)
T 1h2b_A           12 GVERLKAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEG   91 (359)
T ss_dssp             -----CEEEESSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTT
T ss_pred             ChhhceEEEEecCCCCcEEEEccCCCCCCCCEEEEEEEEEEecccchHHHhCCCccccCCCCCeecCcCceEEEEEECCC
Confidence            45667777777774 79999999999 99999999999999999999988874321012367999999999999999999


Q ss_pred             CCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccc---ccc-hh
Q 018075           89 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGA---MCE-PL  164 (361)
Q Consensus        89 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa---~~~-~~  164 (361)
                      |++|++||||+..+..+|+.|.+|+.|++++|++...++. ...|+|+||++++++.++++|+++++++||   .+. ++
T Consensus        92 v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~-~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~l~~~~  170 (359)
T 1h2b_A           92 VEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGL-NIDGGFAEFMRTSHRSVIKLPKDISREKLVEMAPLADAG  170 (359)
T ss_dssp             CCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTT-TBCCSSBSEEEECGGGEEECCTTCCHHHHHHTGGGGTHH
T ss_pred             CCCCCCCCEEEeCCCCCCCCChhhhCcCcccCCCcccccc-CCCCcccceEEechHhEEECCCCCCHHHHhhccchhhhH
Confidence            9999999999988888999999999999999998776653 457999999999999999999999999998   343 56


Q ss_pred             HHHHHHHHh--cCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHH
Q 018075          165 SVGVHACRR--ANVGPETNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDV  241 (361)
Q Consensus       165 ~~a~~~l~~--~~~~~g~~vlI~G~g~~G~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~  241 (361)
                      .|||+++++  +++++|++|||+|+|++|++++|+||.+ |+ +|++++++++++++++++|+++++++.+  . +.+.+
T Consensus       171 ~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~--~-~~~~v  246 (359)
T 1h2b_A          171 ITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPA-TVIALDVKEEKLKLAERLGADHVVDARR--D-PVKQV  246 (359)
T ss_dssp             HHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCC-EEEEEESSHHHHHHHHHTTCSEEEETTS--C-HHHHH
T ss_pred             HHHHHHHHhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEEeCCHHHHHHHHHhCCCEEEeccc--h-HHHHH
Confidence            789999987  8999999999999999999999999999 99 7999999999999999999999988643  3 55666


Q ss_pred             HHHHhhcCCCccEEEEccCChH--HHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-CCcHHHHHHH
Q 018075          242 GKIQNAMGSGIDVSFDCVGFDK--TMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEF  318 (361)
Q Consensus       242 ~~~~~~~~~~~d~vld~~g~~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~  318 (361)
                      +++.  .+.++|+|||++|++.  .++.++++  ++|+++.+|..... .++...++.+++++.+++.. .+++++++++
T Consensus       247 ~~~~--~g~g~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~g~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l  321 (359)
T 1h2b_A          247 MELT--RGRGVNVAMDFVGSQATVDYTPYLLG--RMGRLIIVGYGGEL-RFPTIRVISSEVSFEGSLVGNYVELHELVTL  321 (359)
T ss_dssp             HHHT--TTCCEEEEEESSCCHHHHHHGGGGEE--EEEEEEECCCSSCC-CCCHHHHHHTTCEEEECCSCCHHHHHHHHHH
T ss_pred             HHHh--CCCCCcEEEECCCCchHHHHHHHhhc--CCCEEEEEeCCCCC-CCCHHHHHhCCcEEEEecCCCHHHHHHHHHH
Confidence            5553  2458999999999886  78888877  99999999976544 55666778899999998765 5679999999


Q ss_pred             HHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          319 LRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       319 l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      +++|++  ++.+ ++|+|  +++++|++.+.+++..||+|+++
T Consensus       322 ~~~g~l--~~~i-~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  359 (359)
T 1h2b_A          322 ALQGKV--RVEV-DIHKL--DEINDVLERLEKGEVLGRAVLIP  359 (359)
T ss_dssp             HHTTSC--CCCE-EEEEG--GGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             HHcCCC--cceE-EEEeH--HHHHHHHHHHHcCCCceEEEeeC
Confidence            999999  5667 89999  99999999999998889999874

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=4e-55  Score=407.36  Aligned_cols=340  Identities=24%  Similarity=0.408  Sum_probs=290.9

Q ss_pred             CcccceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCC
Q 018075           11 DKNQNMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEV   89 (361)
Q Consensus        11 ~~~~~~~~~~~~~~-~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   89 (361)
                      .|++|+++++.+++ +++++++|.|+|+++||||||.++|||++|++...|...    ..+|+++|||++|+|+++|++|
T Consensus         5 ~~~~mkA~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~----~~~P~v~GhE~~G~V~~vG~~v   80 (374)
T 2jhf_A            5 KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLV----TPLPVIAGHEAAGIVESIGEGV   80 (374)
T ss_dssp             SCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSC----CCSSBCCCCSEEEEEEEECTTC
T ss_pred             CceeEEEEEEecCCCceEEEEccCCCCCCCeEEEEEeEEeechhhHHHHcCCCC----CCCCcccCcCceEEEEEECCCC
Confidence            46677888887775 699999999999999999999999999999998877431    2379999999999999999999


Q ss_pred             CCCCCCCEEEecCCcCCCCCccccCCCCCCCCCcccc---CC-----------------CCCCCceeEEEEecCCceEEC
Q 018075           90 KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF---GS-----------------PPTNGSLAHKVVHPAKLCYKL  149 (361)
Q Consensus        90 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----------------~~~~g~~~~~~~~~~~~~~~v  149 (361)
                      ++|++||||++.+..+|++|.+|+.|++++|++....   +.                 ....|+|+||++++++.++++
T Consensus        81 ~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~i  160 (374)
T 2jhf_A           81 TTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKI  160 (374)
T ss_dssp             CSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEEC
T ss_pred             CCCCCCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccccCCcccccccccccccccCCccCeeEEEEchHHeEEC
Confidence            9999999999999899999999999999999986432   11                 012599999999999999999


Q ss_pred             CCCCCcccccccc-hhHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEE
Q 018075          150 PDNVSLEEGAMCE-PLSVGVHACR-RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET  227 (361)
Q Consensus       150 P~~~~~~~aa~~~-~~~~a~~~l~-~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~  227 (361)
                      |+++++++||+++ ++.|||+++. .+++++|++|||+|+|++|++++|+|+.+|+.+|+++++++++.++++++|++.+
T Consensus       161 P~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~v  240 (374)
T 2jhf_A          161 DAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATEC  240 (374)
T ss_dssp             CTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEE
T ss_pred             CCCCCHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceE
Confidence            9999999999775 7899999885 5899999999999999999999999999999779999999999999999999998


Q ss_pred             eecCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCC-CEEEEEccCCC--CcceechHhhhcCcEEEE
Q 018075          228 AKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKT--EMTVALTPAAAREVDVIG  304 (361)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~  304 (361)
                      +++.+...++.+.++++.   +.++|+|||++|.+..++.++++|+++ |+++.+|....  ...++...++.++ ++.+
T Consensus       241 i~~~~~~~~~~~~~~~~~---~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g  316 (374)
T 2jhf_A          241 VNPQDYKKPIQEVLTEMS---NGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGR-TWKG  316 (374)
T ss_dssp             ECGGGCSSCHHHHHHHHT---TSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTC-EEEE
T ss_pred             ecccccchhHHHHHHHHh---CCCCcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCccccCHHHHhcCC-eEEE
Confidence            876532245666665553   348999999999877899999999999 99999996553  2345555666777 9988


Q ss_pred             eecC----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          305 IFRY----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       305 ~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      ++..    .++++++++++++|++++.+.++++|+|  +++++|++.+++++. +|+|+++
T Consensus       317 ~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l--~~~~~A~~~~~~~~~-~Kvvi~~  374 (374)
T 2jhf_A          317 AIFGGFKSKDSVPKLVADFMAKKFALDPLITHVLPF--EKINEGFDLLRSGES-IRTILTF  374 (374)
T ss_dssp             CSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEG--GGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             eccCCCChHHHHHHHHHHHHcCCCCchhheEEEEeH--HHHHHHHHHHHCCCc-ceEEEeC
Confidence            7643    4578999999999999877888999999  999999999998864 7999875

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=3.2e-55  Score=407.97  Aligned_cols=341  Identities=25%  Similarity=0.394  Sum_probs=290.8

Q ss_pred             CcccceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCC
Q 018075           11 DKNQNMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEV   89 (361)
Q Consensus        11 ~~~~~~~~~~~~~~-~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   89 (361)
                      .|++|+++++.+++ +++++++|.|+|+++||+|||+++|||++|++...|...   ...+|+++|||++|+|+++|++|
T Consensus         3 ~p~~mkA~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~~P~v~GhE~~G~V~~vG~~V   79 (373)
T 2fzw_A            3 EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADP---EGCFPVILGHLGAGIVESVGEGV   79 (373)
T ss_dssp             CCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCT---TCCSSBCCCCEEEEEEEEECTTC
T ss_pred             CccceEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEEEEchhhHHHhcCCCC---CCCCCccccccccEEEEEECCCC
Confidence            45677888887775 699999999999999999999999999999998877432   13579999999999999999999


Q ss_pred             CCCCCCCEEEecCCcCCCCCccccCCCCCCCCCcccc---CC-----------------CCCCCceeEEEEecCCceEEC
Q 018075           90 KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF---GS-----------------PPTNGSLAHKVVHPAKLCYKL  149 (361)
Q Consensus        90 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----------------~~~~g~~~~~~~~~~~~~~~v  149 (361)
                      ++|++||||++.+..+|++|.+|+.|++++|++....   +.                 ....|+|+||++++++.++++
T Consensus        80 ~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~i  159 (373)
T 2fzw_A           80 TKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKI  159 (373)
T ss_dssp             CSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEEC
T ss_pred             CCCCCCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccccCCcccccccccccccccCCccceeEEEEchhheEEC
Confidence            9999999999999899999999999999999975321   10                 013599999999999999999


Q ss_pred             CCCCCcccccccc-hhHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEE
Q 018075          150 PDNVSLEEGAMCE-PLSVGVHACR-RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET  227 (361)
Q Consensus       150 P~~~~~~~aa~~~-~~~~a~~~l~-~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~  227 (361)
                      |+++++++||+++ ++.|||+++. .+++++|++|||+|+|++|++++|+|+.+|+..|+++++++++.++++++|++.+
T Consensus       160 P~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~v  239 (373)
T 2fzw_A          160 DPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATEC  239 (373)
T ss_dssp             CTTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEE
T ss_pred             CCCCCHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceE
Confidence            9999999999775 7889999885 5899999999999999999999999999999779999999999999999999998


Q ss_pred             eecCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCC-CEEEEEccCCC--CcceechHhhhcCcEEEE
Q 018075          228 AKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKT--EMTVALTPAAAREVDVIG  304 (361)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~  304 (361)
                      +++.+...++.+.++++.   +.++|+|||++|.+..++.++++|+++ |+++.+|....  ...++...+..++ ++.+
T Consensus       240 i~~~~~~~~~~~~v~~~~---~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~-~i~g  315 (373)
T 2fzw_A          240 INPQDFSKPIQEVLIEMT---DGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGR-TWKG  315 (373)
T ss_dssp             ECGGGCSSCHHHHHHHHT---TSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTC-EEEE
T ss_pred             eccccccccHHHHHHHHh---CCCCCEEEECCCcHHHHHHHHHhhccCCcEEEEEecCCCCceeeeCHHHHhcCC-EEEE
Confidence            876432245666665553   348999999999877899999999999 99999996653  2344555566777 8988


Q ss_pred             eecC----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          305 IFRY----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       305 ~~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      +...    .++++++++++++|++++.+.++++|+|  +++++|++.+++++. +|+|+++
T Consensus       316 ~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l--~~~~~A~~~~~~~~~-~kvvi~~  373 (373)
T 2fzw_A          316 TAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSF--DEINKAFELMHSGKS-IRTVVKI  373 (373)
T ss_dssp             CSGGGCCHHHHHHHHHHHHHTTSSCSGGGEEEEEEG--GGHHHHHHHHHHTCC-SEEEEEC
T ss_pred             eccCCCCcHHHHHHHHHHHHcCCCCchheEeEEeeH--HHHHHHHHHHhCCCc-ceEEEeC
Confidence            7643    4578999999999999777889999999  999999999998865 7999875

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.4e-55  Score=410.03  Aligned_cols=335  Identities=25%  Similarity=0.408  Sum_probs=288.1

Q ss_pred             ccceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCC
Q 018075           13 NQNMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS   91 (361)
Q Consensus        13 ~~~~~~~~~~~~-~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   91 (361)
                      ++|+++++.+++ +++++++|.|+|+++||+|||.++|||++|++...|..    +..+|+++|||++|+|+++|++|++
T Consensus         5 ~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~----~~~~P~v~GhE~~G~V~~vG~~v~~   80 (371)
T 1f8f_A            5 KDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKY----PVPLPAVLGHEGSGIIEAIGPNVTE   80 (371)
T ss_dssp             EEEEEEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSS----CCCSSBCCCCEEEEEEEEECTTCCS
T ss_pred             ccceEEEEcCCCCCeEEEEecCCCCCCCEEEEEEEEeecCchhHHHHcCCC----CCCCCcccCcccceEEEEeCCCCCC
Confidence            346777777765 69999999999999999999999999999999888743    2357999999999999999999999


Q ss_pred             CCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCC----------------------CCCCCceeEEEEecCCceEEC
Q 018075           92 LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS----------------------PPTNGSLAHKVVHPAKLCYKL  149 (361)
Q Consensus        92 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~g~~~~~~~~~~~~~~~v  149 (361)
                      |++||||++.+ .+|++|.+|+.|++++|++...++.                      ....|+|+||++++++.++++
T Consensus        81 ~~~GdrV~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~~~~~~~i  159 (371)
T 1f8f_A           81 LQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKV  159 (371)
T ss_dssp             CCTTCEEEECC-CCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEE
T ss_pred             CCCCCEEEecC-CCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccCCccccCeEEechhheEEC
Confidence            99999999999 9999999999999999997642110                      013589999999999999999


Q ss_pred             CCCCCcccccccc-hhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEE
Q 018075          150 PDNVSLEEGAMCE-PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET  227 (361)
Q Consensus       150 P~~~~~~~aa~~~-~~~~a~~~l-~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~  227 (361)
                      |+++++++||.+. ++.+||+++ +.+++++|++|||+|+|++|++++|+||.+|+.+|++++.++++.++++++|++.+
T Consensus       160 P~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~v  239 (371)
T 1f8f_A          160 TKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHV  239 (371)
T ss_dssp             CTTSCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEE
T ss_pred             CCCCCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCCEE
Confidence            9999999998775 889999999 45899999999999999999999999999999779999999999999999999998


Q ss_pred             eecCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC--CcceechHhhhcCcEEEEe
Q 018075          228 AKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT--EMTVALTPAAAREVDVIGI  305 (361)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~  305 (361)
                      +++..  .++.+.++++.   +.++|+|||++|.+..++.++++|+++|+++.+|....  ...++...++.+++++.++
T Consensus       240 i~~~~--~~~~~~~~~~~---~gg~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~  314 (371)
T 1f8f_A          240 INSKT--QDPVAAIKEIT---DGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGV  314 (371)
T ss_dssp             EETTT--SCHHHHHHHHT---TSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCEEEEC
T ss_pred             ecCCc--cCHHHHHHHhc---CCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCCCCCCccccCHHHHHhCCCEEEEe
Confidence            88643  45666665543   33899999999987789999999999999999997643  2345556678899999998


Q ss_pred             ecC----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          306 FRY----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       306 ~~~----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      +..    .++++++++++++|++++.+.+++ |+|  +++++|++.+++++. +|+|+++
T Consensus       315 ~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~-~~l--~~~~~A~~~~~~~~~-~Kvvv~~  370 (371)
T 1f8f_A          315 VEGSGSPKKFIPELVRLYQQGKFPFDQLVKF-YAF--DEINQAAIDSRKGIT-LKPIIKI  370 (371)
T ss_dssp             SGGGSCHHHHHHHHHHHHHTTSCCGGGGEEE-EEG--GGHHHHHHHHHHTSC-SEEEEEC
T ss_pred             CCCCCchHHHHHHHHHHHHcCCCCcccceeE-ecH--HHHHHHHHHHHCCCc-eEEEEee
Confidence            653    357899999999999977778888 999  999999999998865 7999874

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=3.1e-55  Score=403.82  Aligned_cols=334  Identities=25%  Similarity=0.405  Sum_probs=288.7

Q ss_pred             ceEEEEeeCCc-eEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCC
Q 018075           15 NMAAWLLGIKT-LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE   93 (361)
Q Consensus        15 ~~~~~~~~~~~-l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   93 (361)
                      |+++++.+++. ++++++|.|+|++|||||||+++|||++|++..+|... ..+..+|+++|||++|+|+++|++|++|+
T Consensus         1 MkA~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~~~~p~i~G~e~~G~V~~vG~~v~~~~   79 (345)
T 3jv7_A            1 MKAVQYTEIGSEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAA-QYAYGLPLTLGHEGVGTVAELGEGVTGFG   79 (345)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTT-TCCSCSSEECCSEEEEEEEEECTTCCSCC
T ss_pred             CeEEEEcCCCCceEEEEecCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-ccCCCCCcccCcccEEEEEEECCCCCCCC
Confidence            46677777754 99999999999999999999999999999999887532 22357899999999999999999999999


Q ss_pred             CCCEEEecCCcCCCCCccccCCCCCCCCCcccc----CCCCCCCceeEEEEec-CCceEECCCCCCccccccc-chhHHH
Q 018075           94 VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF----GSPPTNGSLAHKVVHP-AKLCYKLPDNVSLEEGAMC-EPLSVG  167 (361)
Q Consensus        94 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~g~~~~~~~~~-~~~~~~vP~~~~~~~aa~~-~~~~~a  167 (361)
                      +||||+..+..+|+.|.+|+.|++++|.....+    .+....|+|+||++++ ++.++++|+ +++++||.+ .++.||
T Consensus        80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~~p~-~~~~~aa~l~~~~~ta  158 (345)
T 3jv7_A           80 VGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVPIGD-LDPVAAAPLTDAGLTP  158 (345)
T ss_dssp             TTCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCCCBTTTBCCSSBSEEEESCGGGEEECTT-CCHHHHGGGGTTTHHH
T ss_pred             CCCEEEEecCCCCCCChHHHCcCcCcCccccccccccCCcCCCceeeEEEEecchhceEeCCC-CCHHHhhhhhhhHHHH
Confidence            999999999999999999999999999432111    1223579999999999 999999999 999999855 588999


Q ss_pred             HHHHHhc--CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHH
Q 018075          168 VHACRRA--NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       168 ~~~l~~~--~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~  245 (361)
                      |+++++.  ++++|++|||+|+|++|++++|+|+.+|..+|++++++++|.++++++|++.++++..   ++.+.++++.
T Consensus       159 ~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~~~~---~~~~~v~~~t  235 (345)
T 3jv7_A          159 YHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSGA---GAADAIRELT  235 (345)
T ss_dssp             HHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEECST---THHHHHHHHH
T ss_pred             HHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcCCC---cHHHHHHHHh
Confidence            9999874  8999999999999999999999999995558999999999999999999999888642   5666666554


Q ss_pred             hhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC-CcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCC
Q 018075          246 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGK  323 (361)
Q Consensus       246 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~  323 (361)
                        .+.++|+|||++|++..++.++++|+++|+++.+|.... ...++. .++.+++++.++... .++++++++++++|+
T Consensus       236 --~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~-~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~  312 (345)
T 3jv7_A          236 --GGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGF-FMIPFGASVVTPYWGTRSELMEVVALARAGR  312 (345)
T ss_dssp             --GGGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCTTCCEEEST-TTSCTTCEEECCCSCCHHHHHHHHHHHHTTC
T ss_pred             --CCCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCcCH-HHHhCCCEEEEEecCCHHHHHHHHHHHHcCC
Confidence              356899999999998899999999999999999997665 445554 677889999998766 578999999999999


Q ss_pred             CCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          324 IDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       324 ~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      +++   ++++|+|  +++++|++.+.+++..||+|++.
T Consensus       313 l~~---~~~~~~l--~~~~~A~~~~~~~~~~Gkvvv~p  345 (345)
T 3jv7_A          313 LDI---HTETFTL--DEGPAAYRRLREGSIRGRGVVVP  345 (345)
T ss_dssp             CCC---CEEEECS--TTHHHHHHHHHHTCCSSEEEECC
T ss_pred             Cce---EEEEEcH--HHHHHHHHHHHcCCCceeEEeCC
Confidence            954   4588999  99999999999999999999864

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=6.9e-56  Score=412.87  Aligned_cols=341  Identities=26%  Similarity=0.414  Sum_probs=294.6

Q ss_pred             CCcccceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCC
Q 018075           10 GDKNQNMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSE   88 (361)
Q Consensus        10 ~~~~~~~~~~~~~~~-~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   88 (361)
                      +|--+|+++++.+++ .++++++|.|+|+++||||||.++|||++|++.+.|...   ...+|+++|||++|+|+++| +
T Consensus        13 ~~~~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~---~~~~P~v~GhE~~G~V~~vG-~   88 (380)
T 1vj0_A           13 MMGLKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDP---RVPLPIILGHEGAGRVVEVN-G   88 (380)
T ss_dssp             -CCEEEEEEEBCSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCT---TCCSSBCCCCEEEEEEEEES-S
T ss_pred             HhhhheEEEEEecCCCCeEEEEccCCCCCCCEEEEEEeEEeecccchHHhcCCCC---CCCCCcccCcCcEEEEEEeC-C
Confidence            344667777777887 899999999999999999999999999999998887432   13679999999999999999 9


Q ss_pred             CC------CCCCCCEEEecCCcCCCCCcccc-CCCCCCCCCccccCCC-------CCCCceeEEEEe-cCCceEECCCCC
Q 018075           89 VK------SLEVGDRVALEPGISCGHCSLCK-AGSYNLCPEMRFFGSP-------PTNGSLAHKVVH-PAKLCYKLPDNV  153 (361)
Q Consensus        89 v~------~~~~Gd~V~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-------~~~g~~~~~~~~-~~~~~~~vP~~~  153 (361)
                      |+      +|++||||++.+..+|++|.+|+ .|++++|++..+++..       ...|+|+||+++ +++.++++|+++
T Consensus        89 V~~~~~~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~~g~~~~~~~~~~~~G~~aey~~v~~~~~~~~iP~~l  168 (380)
T 1vj0_A           89 EKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKD  168 (380)
T ss_dssp             CCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEECTTS
T ss_pred             ccccccCCCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCcceeccccccCCCCCCCccccceEEEcccceEEECCCCC
Confidence            99      99999999999989999999999 9999999987666531       347999999999 999999999999


Q ss_pred             Ccc-cccccchhHHHHHHHHhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecC
Q 018075          154 SLE-EGAMCEPLSVGVHACRRAN-VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS  231 (361)
Q Consensus       154 ~~~-~aa~~~~~~~a~~~l~~~~-~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  231 (361)
                      +++ +|++++++.+||++++..+ +++|++|||+|+|++|++++|+|+.+|+.+|+++++++++.++++++|++.++++.
T Consensus       169 ~~~~~Aa~~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~  248 (380)
T 1vj0_A          169 DLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRR  248 (380)
T ss_dssp             CHHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETT
T ss_pred             ChHHhHhhhcHHHHHHHHHHhcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCCcEEEecc
Confidence            999 8888889999999998888 99999999999999999999999999954799999999999999999999988754


Q ss_pred             C-CccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCC-C-CcceechH-hhhcCcEEEEeec
Q 018075          232 T-DIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK-T-EMTVALTP-AAAREVDVIGIFR  307 (361)
Q Consensus       232 ~-~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~-~~~~~~~~-~~~~~~~i~~~~~  307 (361)
                      . ...++.+.++++.  .+.++|+|||++|.+..++.++++|+++|+++.+|... . ...++... ++.+++++.+++.
T Consensus       249 ~~~~~~~~~~v~~~~--~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~  326 (380)
T 1vj0_A          249 ETSVEERRKAIMDIT--HGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWV  326 (380)
T ss_dssp             TSCHHHHHHHHHHHT--TTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCC
T ss_pred             ccCcchHHHHHHHHh--CCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCCeeEchHHHHHhCCeEEEEeec
Confidence            1 0245555555443  34589999999998668999999999999999999765 4 44566666 7889999999876


Q ss_pred             C-CCcHHHHHHHHHc--CCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          308 Y-RSTWPLCIEFLRS--GKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       308 ~-~~~~~~~~~~l~~--g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      . .++++++++++++  |++  ++.++++|+|  +++++|++.+++++.. |+|+++
T Consensus       327 ~~~~~~~~~~~l~~~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~-Kvvl~~  378 (380)
T 1vj0_A          327 SDTSHFVKTVSITSRNYQLL--SKLITHRLPL--KEANKALELMESREAL-KVILYP  378 (380)
T ss_dssp             CCHHHHHHHHHHHHTCHHHH--GGGCCEEEEG--GGHHHHHHHHHHTSCS-CEEEEC
T ss_pred             CCHHHHHHHHHHHHhhcCCe--eeEEEEEEeH--HHHHHHHHHHhcCCCc-eEEEEe
Confidence            5 5679999999999  998  7778889999  9999999999998888 999874

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=9.7e-56  Score=407.57  Aligned_cols=327  Identities=22%  Similarity=0.295  Sum_probs=282.8

Q ss_pred             CcccceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCC
Q 018075           11 DKNQNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEV   89 (361)
Q Consensus        11 ~~~~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   89 (361)
                      |+++|+++++.++ +.++++++|.|+|+++||||||.++|||++|++.+.|....   ..+|+++|||++|+|+++|++|
T Consensus         1 M~m~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~p~i~G~E~~G~V~~vG~~v   77 (348)
T 3two_A            1 MRVQSKGFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKE---GIYPMIPGHEIAGIIKEVGKGV   77 (348)
T ss_dssp             CCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTSSSC---CCSSBCCCCCEEEEEEEECTTC
T ss_pred             CceEEEEEEEccCCCCCeEEEeeCCCCCCCeEEEEEEEeeecccchhhhcCCCCC---CCCCeecCcceeEEEEEECCCC
Confidence            4567777777766 67999999999999999999999999999999998875422   4679999999999999999999


Q ss_pred             CCCCCCCEEEecCC-cCCCCCccccCCCCCCCCCccccCCC---------CCCCceeEEEEecCCceEECCCCCCccccc
Q 018075           90 KSLEVGDRVALEPG-ISCGHCSLCKAGSYNLCPEMRFFGSP---------PTNGSLAHKVVHPAKLCYKLPDNVSLEEGA  159 (361)
Q Consensus        90 ~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa  159 (361)
                      ++|++||||++.+. .+|++|.+|+.|++++|+ ....+..         ...|+|+||++++++.++++|+++++++||
T Consensus        78 ~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~c~-~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa  156 (348)
T 3two_A           78 KKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCT-KVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVA  156 (348)
T ss_dssp             CSCCTTCEEEECSEEECCSCSHHHHTTCGGGCT-TCEESSSSEEGGGTTEECCCSSBSEEEEEGGGCEECCTTSCHHHHG
T ss_pred             CCCCCCCEEEEeCCcCCCCCChhHhCCCcccCc-ccccccccccccccCCcCCccccceEEechhhEEECCCCCCHHHhh
Confidence            99999999998654 689999999999999998 3333221         123999999999999999999999999999


Q ss_pred             ccc-hhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchh
Q 018075          160 MCE-PLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVD  238 (361)
Q Consensus       160 ~~~-~~~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~  238 (361)
                      .+. .+.+||+++++.++++|++|||+|+|++|++++|+|+.+|+ +|++++.++++.++++++|++.++ .  +...  
T Consensus       157 ~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~v~-~--~~~~--  230 (348)
T 3two_A          157 PLLCAGITTYSPLKFSKVTKGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALSMGVKHFY-T--DPKQ--  230 (348)
T ss_dssp             GGGTHHHHHHHHHHHTTCCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHHTTCSEEE-S--SGGG--
T ss_pred             hhhhhHHHHHHHHHhcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCeec-C--CHHH--
Confidence            664 78889999988899999999999999999999999999999 799999999999999999999877 2  1111  


Q ss_pred             HHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCC-CCcc-eechHhh-hcCcEEEEeecC-CCcHHH
Q 018075          239 TDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK-TEMT-VALTPAA-AREVDVIGIFRY-RSTWPL  314 (361)
Q Consensus       239 ~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~-~~~~~~~-~~~~~i~~~~~~-~~~~~~  314 (361)
                           +    ..++|+|||++|++..++.++++|+++|+++.+|... .... ++...+. .+++++.++... .+++++
T Consensus       231 -----~----~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~  301 (348)
T 3two_A          231 -----C----KEELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYGSLIGGIKETQE  301 (348)
T ss_dssp             -----C----CSCEEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGGGCCEEEHHHHHHTCSCEEEECCSCCHHHHHH
T ss_pred             -----H----hcCCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCCcccCCHHHHHhhCCeEEEEEecCCHHHHHH
Confidence                 1    2289999999998778999999999999999999776 5444 5656677 899999998776 567999


Q ss_pred             HHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          315 CIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       315 ~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      +++++++|+++  +.+ ++|+|  +++++|++.+.+++..||+|+++
T Consensus       302 ~~~l~~~g~l~--~~~-~~~~l--~~~~~A~~~~~~~~~~gKvVi~~  343 (348)
T 3two_A          302 MVDFSIKHNIY--PEI-DLILG--KDIDTAYHNLTHGKAKFRYVIDM  343 (348)
T ss_dssp             HHHHHHHTTCC--CCE-EEECG--GGHHHHHHHHHTTCCCSEEEEEG
T ss_pred             HHHHHHhCCCC--ceE-EEEEH--HHHHHHHHHHHcCCCceEEEEec
Confidence            99999999994  444 78999  99999999999999999999874

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=7.2e-55  Score=402.10  Aligned_cols=333  Identities=25%  Similarity=0.413  Sum_probs=295.0

Q ss_pred             ceEEEEee--CCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCC
Q 018075           15 NMAAWLLG--IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL   92 (361)
Q Consensus        15 ~~~~~~~~--~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   92 (361)
                      |+++++..  ++.++++|+|+|+|+||||||||.|+|||++|+++.+|..    ..++|+++|||++|+|+++|++|++|
T Consensus         1 MKA~v~~~~~~~~~~l~e~~~P~~~p~eVLVkv~a~gic~~D~~~~~G~~----~~~~p~i~GhE~aG~V~~vG~~V~~~   76 (348)
T 4eez_A            1 MKAAVVRHNPDGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDF----GNKAGTVLGHEGIGIVKEIGADVSSL   76 (348)
T ss_dssp             CEEEEECSSCCSSEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTTT----CCCTTCBCCSEEEEEEEEECTTCCSC
T ss_pred             CeEEEEEcCCCCcEEEEEeECCCCCCCEEEEEEEEEEECHHHHHHhcCCC----CCCCCcccceeEEEEEEEECceeeec
Confidence            56667653  4679999999999999999999999999999999988753    34789999999999999999999999


Q ss_pred             CCCCEEEecCC-cCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccc-hhHHHHHH
Q 018075           93 EVGDRVALEPG-ISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHA  170 (361)
Q Consensus        93 ~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-~~~~a~~~  170 (361)
                      ++||||++.+. ..|+.|.+|..+....|+.....+. ..+|+|+||+.++++.++++|+++++++|+++. ++.|||++
T Consensus        77 ~~GdrV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~G~~ae~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~  155 (348)
T 4eez_A           77 QVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGY-SVDGGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKA  155 (348)
T ss_dssp             CTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEEEGGGSCBCCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             ccCCeEeecccccccCccccccCCccccccccccccc-ccCCcceeeccccccceeecCCCCCHHHHhhcccceeeEEee
Confidence            99999988765 4688999999999999998776664 468999999999999999999999999998664 77889999


Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCC
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (361)
                      ++..++++|++|||+|+|++|.+++|+|+.++..+|++++++++|.++++++|++.++++..  .++.+.++++.  ++.
T Consensus       156 l~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~~--~~~~~~v~~~t--~g~  231 (348)
T 4eez_A          156 IKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSGD--VNPVDEIKKIT--GGL  231 (348)
T ss_dssp             HHHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-C--CCHHHHHHHHT--TSS
T ss_pred             ecccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCCC--CCHHHHhhhhc--CCC
Confidence            98888999999999999999999999999886658999999999999999999999998654  56767766654  477


Q ss_pred             CccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCCCc
Q 018075          251 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPL  329 (361)
Q Consensus       251 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~  329 (361)
                      ++|.++++++++..+..++++++++|+++.+|.......++...++++++++.|+..+ +.+++++++++++|++  ++.
T Consensus       232 g~d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~gs~~~~~~~~~~~~~l~~~g~i--~p~  309 (348)
T 4eez_A          232 GVQSAIVCAVARIAFEQAVASLKPMGKMVAVAVPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAFQFGAEGKV--KPI  309 (348)
T ss_dssp             CEEEEEECCSCHHHHHHHHHTEEEEEEEEECCCCSCEEEECHHHHHHSCCEEEECCSCCHHHHHHHHHHHHTTSC--CCC
T ss_pred             CceEEEEeccCcchhheeheeecCCceEEEEeccCCCCccCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHcCCC--EEE
Confidence            8999999999998999999999999999999987777777888899999999998776 5679999999999999  554


Q ss_pred             eEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          330 ITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       330 ~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      + ++|+|  +++++|++.+++++..||+||++
T Consensus       310 ~-~~~~l--~~~~~A~~~l~~g~~~GKvVl~~  338 (348)
T 4eez_A          310 V-ATRKL--EEINDIIDEMKAGKIEGRMVIDF  338 (348)
T ss_dssp             E-EEECG--GGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             E-EEEeH--HHHHHHHHHHHCCCCccEEEEEc
Confidence            4 78899  99999999999999999999975

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=3.3e-54  Score=395.82  Aligned_cols=332  Identities=30%  Similarity=0.451  Sum_probs=287.5

Q ss_pred             ceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCC
Q 018075           15 NMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE   93 (361)
Q Consensus        15 ~~~~~~~~~~-~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   93 (361)
                      |+++++.+++ .++++++|.|+|+++||+|||.++|||++|++...|...  ....+|+++|||++|+|+++|++|++|+
T Consensus         1 Mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~~p~v~GhE~~G~V~~vG~~v~~~~   78 (339)
T 1rjw_A            1 MKAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWP--VKPKLPLIPGHEGVGIVEEVGPGVTHLK   78 (339)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSS--SCCCSSBCCCSCEEEEEEEECTTCCSCC
T ss_pred             CeEEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEeEchhhHHHhcCCCC--cCCCCCeeccccceEEEEEECCCCCcCC
Confidence            3555666665 799999999999999999999999999999998877432  1236799999999999999999999999


Q ss_pred             CCCEEEecCCc-CCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccc-hhHHHHHHH
Q 018075           94 VGDRVALEPGI-SCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHAC  171 (361)
Q Consensus        94 ~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-~~~~a~~~l  171 (361)
                      +||||++.+.. .|++|.+|+.|++++|++..+++. ...|+|+||++++++.++++|+++++++||.+. ++.|||+++
T Consensus        79 vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~-~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l  157 (339)
T 1rjw_A           79 VGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGY-SVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKAL  157 (339)
T ss_dssp             TTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTHHHHHHHHH
T ss_pred             CCCEEEEecCCCCCCCCchhhCcCcccCCCcceeec-CCCCcceeeEEechHHEEECCCCCCHHHhhhhhhhHHHHHHHH
Confidence            99999987654 599999999999999998876663 457999999999999999999999999988664 778899999


Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCC
Q 018075          172 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       172 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (361)
                      ++.++++|++|||+|+|++|++++|+|+..|+ .|+++++++++.++++++|++.++++..  .++.+.+.++.    .+
T Consensus       158 ~~~~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~d~~~--~~~~~~~~~~~----~~  230 (339)
T 1rjw_A          158 KVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNPLK--EDAAKFMKEKV----GG  230 (339)
T ss_dssp             HHHTCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECTTT--SCHHHHHHHHH----SS
T ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEecCCC--ccHHHHHHHHh----CC
Confidence            88789999999999998899999999999999 7999999999999999999998877643  45655555542    48


Q ss_pred             ccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCCCce
Q 018075          252 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLI  330 (361)
Q Consensus       252 ~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~  330 (361)
                      +|++||++|.+..++.++++|+++|+++.+|.......++...++.+++++.++... .++++++++++++|+++  +. 
T Consensus       231 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~--~~-  307 (339)
T 1rjw_A          231 VHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFAAEGKVK--TI-  307 (339)
T ss_dssp             EEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSCC--CC-
T ss_pred             CCEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCCccCHHHHHhCCcEEEEeccCCHHHHHHHHHHHHcCCCC--cc-
Confidence            999999999877899999999999999999977655556666678899999998765 56799999999999994  43 


Q ss_pred             EEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          331 THRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       331 ~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      +++|+|  +++++|++.+++++..||+|+++
T Consensus       308 ~~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  336 (339)
T 1rjw_A          308 IEVQPL--EKINEVFDRMLKGQINGRVVLTL  336 (339)
T ss_dssp             EEEEEG--GGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             EEEEcH--HHHHHHHHHHHcCCCceEEEEec
Confidence            478999  99999999999998889999874

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=4.3e-54  Score=398.56  Aligned_cols=334  Identities=22%  Similarity=0.236  Sum_probs=285.1

Q ss_pred             ccCCcccceEEEEe--eCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEe
Q 018075            8 DEGDKNQNMAAWLL--GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEV   85 (361)
Q Consensus         8 ~~~~~~~~~~~~~~--~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v   85 (361)
                      .++|+.+|+++++.  +++.++++++|.|+|++|||||||+++|||++|++...|....  ...+|+++|||++|+|+++
T Consensus        21 ~~~m~~~mkA~~~~~~~~~~l~~~e~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~P~v~GhE~~G~V~~v   98 (363)
T 3uog_A           21 QSMMSKWMQEWSTETVAPHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGL--DLAFPFVPASDMSGVVEAV   98 (363)
T ss_dssp             --CCCSEEEEEEBSCTTTTCCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCTTC--CCCSSBCCCCEEEEEEEEE
T ss_pred             eccCchhhEEEEEccCCCCCcEEEeeeCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC--CCCCCcCcccceEEEEEEE
Confidence            34567777777777  4578999999999999999999999999999999998875421  2468999999999999999


Q ss_pred             CCCCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCc---cccCCCCCCCceeEEEEecCCceEECCCCCCcccccccc
Q 018075           86 GSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEM---RFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE  162 (361)
Q Consensus        86 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~  162 (361)
                      |++|++|++||||++.+..      .|..|. ..|+..   ....+...+|+|+||++++++.++++|+++++++||+++
T Consensus        99 G~~v~~~~vGDrV~~~~~~------~c~~g~-~~c~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~  171 (363)
T 3uog_A           99 GKSVTRFRPGDRVISTFAP------GWLDGL-RPGTGRTPAYETLGGAHPGVLSEYVVLPEGWFVAAPKSLDAAEASTLP  171 (363)
T ss_dssp             CTTCCSCCTTCEEEECSST------TCCSSS-CCSCSSCCCCCCTTTTSCCCCBSEEEEEGGGEEECCTTSCHHHHHTTT
T ss_pred             CCCCCCCCCCCEEEEeccc------cccccc-cccccccccccccCcCCCCcceeEEEechHHeEECCCCCCHHHHhhcc
Confidence            9999999999999987543      456677 777631   110122357999999999999999999999999999665


Q ss_pred             -hhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHH
Q 018075          163 -PLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTD  240 (361)
Q Consensus       163 -~~~~a~~~l-~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~  240 (361)
                       ++.+||+++ +.+++++|++|||+|+|++|++++|+|+.+|+ +|+++++++++.++++++|++.+++  ....++.+.
T Consensus       172 ~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~--~~~~~~~~~  248 (363)
T 3uog_A          172 CAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFALGADHGIN--RLEEDWVER  248 (363)
T ss_dssp             THHHHHHHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTCSEEEE--TTTSCHHHH
T ss_pred             cHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEecCchhHHHHHHcCCCEEEc--CCcccHHHH
Confidence             778999999 46899999999999999999999999999999 7999999999999999999999887  333567777


Q ss_pred             HHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC-cceechHhhhcCcEEEEeecC-CCcHHHHHHH
Q 018075          241 VGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY-RSTWPLCIEF  318 (361)
Q Consensus       241 ~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~  318 (361)
                      ++++.  .+.++|+|||++|.. .++.++++|+++|+++.+|..... ..++...+..+++++.++... .+++++++++
T Consensus       249 v~~~~--~g~g~D~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l  325 (363)
T 3uog_A          249 VYALT--GDRGADHILEIAGGA-GLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGHRRALEDLVGA  325 (363)
T ss_dssp             HHHHH--TTCCEEEEEEETTSS-CHHHHHHHEEEEEEEEEECCCSSCEECCBTTHHHHTCCEEEECCCCCHHHHHHHHHH
T ss_pred             HHHHh--CCCCceEEEECCChH-HHHHHHHHhhcCCEEEEEecCCCcccCcCHHHHHhCCcEEEEEecCCHHHHHHHHHH
Confidence            76654  356899999999965 899999999999999999976543 456677788999999998876 5789999999


Q ss_pred             HHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          319 LRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       319 l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      +++|++  ++.++++|+|  +++++|++.+.+++ .||+|+++
T Consensus       326 ~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~-~gKvvi~~  363 (363)
T 3uog_A          326 VDRLGL--KPVIDMRYKF--TEVPEALAHLDRGP-FGKVVIEF  363 (363)
T ss_dssp             HHHHTC--CCCEEEEEEG--GGHHHHHHTGGGCC-SBEEEEEC
T ss_pred             HHcCCC--ccceeeEEcH--HHHHHHHHHHHcCC-CccEEEeC
Confidence            999998  7888999999  99999999999998 99999985

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=3.4e-54  Score=396.64  Aligned_cols=332  Identities=23%  Similarity=0.371  Sum_probs=265.7

Q ss_pred             ccceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCC
Q 018075           13 NQNMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS   91 (361)
Q Consensus        13 ~~~~~~~~~~~~-~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   91 (361)
                      ++|+++++.+++ .++++++|.|+|+++||+|||.++|||++|++...|.... ....+|+++|||++|+|+++|++ ++
T Consensus         2 ~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~~p~i~G~E~~G~V~~vG~~-~~   79 (344)
T 2h6e_A            2 VKSKAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAK-QGFRLPIILGHENAGTIVEVGEL-AK   79 (344)
T ss_dssp             EEEEBCEECSCCC-----EEEECCCCTTCEEEEEEEEECCHHHHHHHTTSCCC-TTCCSSEECCCCEEEEEEEECTT-CC
T ss_pred             ceeEEEEEecCCCCCeEEEeeCCCCCCCEEEEEEEEEEechhhHHHHcCCCcc-cCCCCCccccccceEEEEEECCC-CC
Confidence            356666777774 7999999999999999999999999999999988874321 12367999999999999999999 99


Q ss_pred             CCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEec-CCceEECCCCCCccccccc-chhHHHHH
Q 018075           92 LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHP-AKLCYKLPDNVSLEEGAMC-EPLSVGVH  169 (361)
Q Consensus        92 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~vP~~~~~~~aa~~-~~~~~a~~  169 (361)
                      |++||||+..+..+|++|.+|+.|++++|++...++. ...|+|+||++++ ++.++++ +++++++||.+ .++.|||+
T Consensus        80 ~~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~-~~~G~~aey~~v~~~~~~~~i-~~l~~~~aa~l~~~~~ta~~  157 (344)
T 2h6e_A           80 VKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQ-TTNGGFSEYMLVKSSRWLVKL-NSLSPVEAAPLADAGTTSMG  157 (344)
T ss_dssp             CCTTCEEEECSCBCCSCSTTGGGTCGGGCTTCBCBTT-TBCCSSBSEEEESCGGGEEEE-SSSCHHHHGGGGTHHHHHHH
T ss_pred             CCCCCEEEECCCCCCCCChhhhCCCcccCCCcccccc-ccCCcceeeEEecCcccEEEe-CCCCHHHhhhhhhhhHHHHH
Confidence            9999999888888999999999999999998766653 4579999999999 9999999 99999999855 47788999


Q ss_pred             HHHhc-----CCCCCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHH
Q 018075          170 ACRRA-----NVGPETNVMIMGSGPIGLVTLLAARAF--GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVG  242 (361)
Q Consensus       170 ~l~~~-----~~~~g~~vlI~G~g~~G~~ai~la~~~--g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~  242 (361)
                      ++++.     ++ +|++|||+|+|++|++++|+|+.+  |+ +|+++++++++.++++++|++.++++...    .+.+.
T Consensus       158 al~~~~~~~~~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~----~~~~~  231 (344)
T 2h6e_A          158 AIRQALPFISKF-AEPVVIVNGIGGLAVYTIQILKALMKNI-TIVGISRSKKHRDFALELGADYVSEMKDA----ESLIN  231 (344)
T ss_dssp             HHHHHHHHHTTC-SSCEEEEECCSHHHHHHHHHHHHHCTTC-EEEEECSCHHHHHHHHHHTCSEEECHHHH----HHHHH
T ss_pred             HHHhhhhcccCC-CCCEEEEECCCHHHHHHHHHHHHhcCCC-EEEEEeCCHHHHHHHHHhCCCEEeccccc----hHHHH
Confidence            99876     89 999999999999999999999999  99 69999999999999999999998775320    12233


Q ss_pred             HHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHc
Q 018075          243 KIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRS  321 (361)
Q Consensus       243 ~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~  321 (361)
                      ++.  .+.++|+|||++|.+..++.++++|+++|+++.+|.......++...++.+++++.++... .++++++++++++
T Consensus       232 ~~~--~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~  309 (344)
T 2h6e_A          232 KLT--DGLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGSNYGSLNDLEDVVRLSES  309 (344)
T ss_dssp             HHH--TTCCEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHHHHHHTTCEEEECCSCCHHHHHHHHHHHHT
T ss_pred             Hhh--cCCCccEEEECCCChHHHHHHHHHhhcCCEEEEeCCCCCCcccCHHHHhhCCcEEEEEecCCHHHHHHHHHHHHc
Confidence            343  2458999999999887899999999999999999976654456666778899999998765 5679999999999


Q ss_pred             CCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          322 GKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       322 g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      |++  ++.+ ++|+|  +++++|++.+++++..||+|+++
T Consensus       310 g~i--~~~i-~~~~l--~~~~~A~~~~~~~~~~gKvvl~~  344 (344)
T 2h6e_A          310 GKI--KPYI-IKVPL--DDINKAFTNLDEGRVDGRQVITP  344 (344)
T ss_dssp             TSS--CCCE-EEECC------------------CEEEECC
T ss_pred             CCC--Ccce-EEEeH--HHHHHHHHHHHcCCCceEEEEeC
Confidence            999  5667 89999  99999999999988889999874

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.3e-53  Score=393.15  Aligned_cols=338  Identities=20%  Similarity=0.325  Sum_probs=291.0

Q ss_pred             CcccceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCC
Q 018075           11 DKNQNMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEV   89 (361)
Q Consensus        11 ~~~~~~~~~~~~~~-~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   89 (361)
                      +|.+|+++++.+++ +++++++|.|+|+++||+|||.++|||++|++...|...  ....+|+++|||++|+|+++|++|
T Consensus         2 ~p~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~~p~v~G~E~~G~V~~vG~~v   79 (347)
T 2hcy_A            2 IPETQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWP--LPVKLPLVGGHEGAGVVVGMGENV   79 (347)
T ss_dssp             CCSEEEEEEESSTTCCCEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHTCSS--SCCCSSEECCCEEEEEEEEECTTC
T ss_pred             CCcccEEEEEeCCCCCCEEEEeeCCCCCCCEEEEEEEEEEechhHHHHhcCCCC--CCCCCCcccCccceEEEEEECCCC
Confidence            56677887777776 799999999999999999999999999999998877432  123679999999999999999999


Q ss_pred             CCCCCCCEEEecCCc-CCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccc-hhHHH
Q 018075           90 KSLEVGDRVALEPGI-SCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVG  167 (361)
Q Consensus        90 ~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-~~~~a  167 (361)
                      ++|++||||++.+.. .|+.|.+|+.|++++|++...++. ...|+|+||++++++.++++|+++++++||.+. ++.+|
T Consensus        80 ~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta  158 (347)
T 2hcy_A           80 KGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGY-THDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITV  158 (347)
T ss_dssp             CSCCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEEBTT-TBCCSSBSEEEEETTTSEEECTTCCHHHHGGGGTHHHHH
T ss_pred             CCCcCCCEEEEecCCCCCCCChhhhCCCcccCcccccccc-CCCCcceeEEEeccccEEECCCCCCHHHHHHHhhhHHHH
Confidence            999999999987654 599999999999999998776653 457999999999999999999999999988664 77889


Q ss_pred             HHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHh
Q 018075          168 VHACRRANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN  246 (361)
Q Consensus       168 ~~~l~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~  246 (361)
                      |+++++.++++|++|||+|+ |++|++++|+++..|+ .|+++++++++.+.++++|++.++++.. ..++.+.++++..
T Consensus       159 ~~~l~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~V~~~~~~~~~~~~~~~~g~~~~~d~~~-~~~~~~~~~~~~~  236 (347)
T 2hcy_A          159 YKALKSANLMAGHWVAISGAAGGLGSLAVQYAKAMGY-RVLGIDGGEGKEELFRSIGGEVFIDFTK-EKDIVGAVLKATD  236 (347)
T ss_dssp             HHHHHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSTTHHHHHHHTTCCEEEETTT-CSCHHHHHHHHHT
T ss_pred             HHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-cEEEEcCCHHHHHHHHHcCCceEEecCc-cHhHHHHHHHHhC
Confidence            99998888999999999996 9999999999999999 7888998999999999999988877642 3466666665542


Q ss_pred             hcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC-CcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCC
Q 018075          247 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKI  324 (361)
Q Consensus       247 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~  324 (361)
                        + ++|++||++|....++.+++.|+++|+++.+|.... ...++...++.+++++.++... .++++++++++++|++
T Consensus       237 --~-~~D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l  313 (347)
T 2hcy_A          237 --G-GAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGNRADTREALDFFARGLV  313 (347)
T ss_dssp             --S-CEEEEEECSSCHHHHHHHTTSEEEEEEEEECCCCTTCEEEEEHHHHHHTTCEEEECCCCCHHHHHHHHHHHHTTSC
T ss_pred             --C-CCCEEEECCCcHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCCHHHHhhCCcEEEEccCCCHHHHHHHHHHHHhCCC
Confidence              4 899999999986789999999999999999997653 3455566678899999998765 5679999999999999


Q ss_pred             CCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          325 DVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       325 ~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      +  +. +++|+|  +++++|++.+++++..||+|+++
T Consensus       314 ~--~~-~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  345 (347)
T 2hcy_A          314 K--SP-IKVVGL--STLPEIYEKMEKGQIVGRYVVDT  345 (347)
T ss_dssp             C--CC-EEEEEG--GGHHHHHHHHHTTCCSSEEEEES
T ss_pred             c--cc-eEEEcH--HHHHHHHHHHHcCCcceeEEEec
Confidence            4  33 478999  99999999999998889999874

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=100.00  E-value=9.7e-55  Score=408.34  Aligned_cols=336  Identities=25%  Similarity=0.436  Sum_probs=289.9

Q ss_pred             ccceEEEEeeCCceEEEEecCCC-CCCCcEEEEEeeeecCcchhhhhccccccc----ccCCCCcccCcceeEEEEEeCC
Q 018075           13 NQNMAAWLLGIKTLKIQPYHLPT-LGPQDVKVRIKALGICGSDVHHFKTMRCAN----FIVKKPMVIGHECAGIIEEVGS   87 (361)
Q Consensus        13 ~~~~~~~~~~~~~l~~~~~~~p~-~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~----~~~~~p~~~G~e~~G~V~~vG~   87 (361)
                      .+++++++..++.++++++|.|+ |+++||||||.++|||++|++.+.|...+.    ....+|+++|||++|+|+++|+
T Consensus        29 ~~m~a~~~~~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~P~i~G~E~~G~V~~vG~  108 (404)
T 3ip1_A           29 LTWLGSKVWRYPEVRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGP  108 (404)
T ss_dssp             BBSCGGGTEEEEEEEEEEECCCCCCSTTEEEEEEEEEECCHHHHHHHCBCTTSBBSCCSCBCSSEECCCEEEEEEEEECT
T ss_pred             hhcceEEEEeCCceEEEEcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCCCCccccccccCCCCcccCccceEEEEEECC
Confidence            45566666666689999999999 999999999999999999999887643221    1246799999999999999999


Q ss_pred             CC------CCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCc------
Q 018075           88 EV------KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSL------  155 (361)
Q Consensus        88 ~v------~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~------  155 (361)
                      +|      ++|++||||++.+..+|+.|.+|+.|++++|++...++. ...|+|+||++++++.++++|+++++      
T Consensus       109 ~v~~~~~~~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~~~~~~~  187 (404)
T 3ip1_A          109 EAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNELGF-NVDGAFAEYVKVDAKYAWSLRELEGVYEGDRL  187 (404)
T ss_dssp             TCEETTTTEECCTTCEEEECSEECCSCSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEEEGGGEEECGGGBTTBCTHHH
T ss_pred             CccccccCCCCCCCCEEEECCccCCCCCHHHHCcCcccCccccccCC-CCCCCCcceEEechHHeEeccccccccccccc
Confidence            99      899999999999999999999999999999999887765 46899999999999999999998863      


Q ss_pred             cccc-ccchhHHHHHHHH-h-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCC
Q 018075          156 EEGA-MCEPLSVGVHACR-R-ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST  232 (361)
Q Consensus       156 ~~aa-~~~~~~~a~~~l~-~-~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~  232 (361)
                      .++| +..++.+||+++. . +++++|++|||+|+|++|++++|+|+.+|+.+|++++++++|.++++++|++.++++..
T Consensus       188 ~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~~~  267 (404)
T 3ip1_A          188 FLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTK  267 (404)
T ss_dssp             HHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEECTTT
T ss_pred             hhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEcCCC
Confidence            2344 5568999999985 3 58999999999999999999999999999988999999999999999999999887643


Q ss_pred             CccchhHHHHHHHhhcCCCccEEEEccCCh-HHHHHHHHhh----cCCCEEEEEccCCCCcceechHhhhcCcEEEEeec
Q 018075          233 DIEDVDTDVGKIQNAMGSGIDVSFDCVGFD-KTMSTALNAT----RPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFR  307 (361)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~~l----~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~  307 (361)
                        .++.+.++++.  .+.++|+|||++|++ ..++.+++.|    +++|+++.+|.......++...+..+++++.|+..
T Consensus       268 --~~~~~~i~~~t--~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~  343 (404)
T 3ip1_A          268 --ENFVEAVLDYT--NGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADAKIPLTGEVFQVRRAQIVGSQG  343 (404)
T ss_dssp             --SCHHHHHHHHT--TTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSCCCSCEEECHHHHHHTTCEEEECCC
T ss_pred             --CCHHHHHHHHh--CCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCCCCCCCcccHHHHhccceEEEEecC
Confidence              56777766654  366899999999987 3667777777    99999999998777667778888999999999885


Q ss_pred             C--CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075          308 Y--RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  360 (361)
Q Consensus       308 ~--~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~  360 (361)
                      .  .++++++++++++| +++.+.++++|+|  +++++|++.+..    ||+|++
T Consensus       344 ~~~~~~~~~~~~ll~~g-l~~~~~i~~~~~l--~~~~~A~~~~~~----GKvvl~  391 (404)
T 3ip1_A          344 HSGHGTFPRVISLMASG-MDMTKIISKTVSM--EEIPEYIKRLQT----DKSLVK  391 (404)
T ss_dssp             CCSTTHHHHHHHHHHTT-CCGGGGCCEEECG--GGHHHHHHHTTT----CTTCSC
T ss_pred             CCchHHHHHHHHHHHcC-CChhheEEEEeeH--HHHHHHHHHHhC----CcEEEe
Confidence            4  67899999999999 8778889999999  999999999983    566654

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=1.7e-54  Score=400.99  Aligned_cols=333  Identities=21%  Similarity=0.315  Sum_probs=283.6

Q ss_pred             CcccceEEEEeeCC-ceEEEE--ecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCC
Q 018075           11 DKNQNMAAWLLGIK-TLKIQP--YHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGS   87 (361)
Q Consensus        11 ~~~~~~~~~~~~~~-~l~~~~--~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   87 (361)
                      +|++|+++++.+++ ++++++  +|.|+|+++||||||+++|||++|++...|...   ...+|+++|||++|+|+++|+
T Consensus         3 ~p~~mka~~~~~~~~~l~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~~p~v~GhE~~G~V~~vG~   79 (360)
T 1piw_A            3 YPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWG---NMKMPLVVGHEIVGKVVKLGP   79 (360)
T ss_dssp             TTTCEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTS---CCCSSEECCCCEEEEEEEECT
T ss_pred             CChheEEEEEecCCCCeeEEeccccCCCCCCCeEEEEEEEeccchhhHHHhcCCCC---CCCCCcccCcCceEEEEEeCC
Confidence            45667777777764 699999  999999999999999999999999998877432   135799999999999999999


Q ss_pred             CCC-CCCCCCEEEecC-CcCCCCCccccCCCCCCCCCc-cccC-----CCCCCCceeEEEEecCCceEECCCCCCccccc
Q 018075           88 EVK-SLEVGDRVALEP-GISCGHCSLCKAGSYNLCPEM-RFFG-----SPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGA  159 (361)
Q Consensus        88 ~v~-~~~~Gd~V~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa  159 (361)
                      +|+ +|++||||++.+ ..+|++|.+|+.|++++|++. ..++     +....|+|+||++++++.++++|+++++++||
T Consensus        80 ~v~~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa  159 (360)
T 1piw_A           80 KSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAA  159 (360)
T ss_dssp             TCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTSCHHHHG
T ss_pred             CCCCCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCccCCCcceeEEEEchhheEECCCCCCHHHhh
Confidence            999 999999996654 468999999999999999976 2231     12357999999999999999999999999988


Q ss_pred             ccc-hhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchh
Q 018075          160 MCE-PLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVD  238 (361)
Q Consensus       160 ~~~-~~~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~  238 (361)
                      .+. ++.+||++++++++++|++|||+|+|++|++++|+|+.+|+ .|+++++++++.++++++|++.++++... .++.
T Consensus       160 ~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~~~lGa~~v~~~~~~-~~~~  237 (360)
T 1piw_A          160 PLLCGGLTVYSPLVRNGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMGADHYIATLEE-GDWG  237 (360)
T ss_dssp             GGGTHHHHHHHHHHHTTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEEGGGT-SCHH
T ss_pred             hhhhhHHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCCEEEcCcCc-hHHH
Confidence            664 78899999988899999999999999999999999999999 69999999999999999999998876431 1332


Q ss_pred             HHHHHHHhhcCCCccEEEEccCC--hHHHHHHHHhhcCCCEEEEEccCCCCc-ceechHhhhcCcEEEEeecC-CCcHHH
Q 018075          239 TDVGKIQNAMGSGIDVSFDCVGF--DKTMSTALNATRPGGKVCLIGLAKTEM-TVALTPAAAREVDVIGIFRY-RSTWPL  314 (361)
Q Consensus       239 ~~~~~~~~~~~~~~d~vld~~g~--~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~-~~~~~~  314 (361)
                      +   ++    ..++|+|||++|.  +..++.++++|+++|+++.+|.... . .++...++.+++++.++... .+++++
T Consensus       238 ~---~~----~~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~  309 (360)
T 1piw_A          238 E---KY----FDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ-HEMLSLKPYGLKAVSISYSALGSIKELNQ  309 (360)
T ss_dssp             H---HS----CSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS-SCCEEECGGGCBSCEEEECCCCCHHHHHH
T ss_pred             H---Hh----hcCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCCCC-ccccCHHHHHhCCeEEEEEecCCHHHHHH
Confidence            2   22    1489999999998  5588899999999999999997655 3 45666778899999998765 567999


Q ss_pred             HHHHHHcCCCCCCCceEEEecCChhh--HHHHHHHHhcCCCceEEEEeC
Q 018075          315 CIEFLRSGKIDVKPLITHRFGFTQKE--IEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       315 ~~~~l~~g~~~~~~~~~~~~~l~~~~--~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      +++++++|++  ++.+ ++|+|  ++  +++|++.+++++..||+|+++
T Consensus       310 ~~~l~~~g~l--~~~i-~~~~l--~~~~~~~A~~~~~~~~~~gKvvi~~  353 (360)
T 1piw_A          310 LLKLVSEKDI--KIWV-ETLPV--GEAGVHEAFERMEKGDVRYRFTLVG  353 (360)
T ss_dssp             HHHHHHHTTC--CCCE-EEEES--SHHHHHHHHHHHHHTCCSSEEEEEC
T ss_pred             HHHHHHhCCC--cceE-EEEec--cHhHHHHHHHHHHCCCCceEEEEec
Confidence            9999999999  5556 89999  99  999999999998889999874

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=2.2e-53  Score=391.04  Aligned_cols=334  Identities=27%  Similarity=0.456  Sum_probs=288.8

Q ss_pred             ceEEEEeeCC---ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCC
Q 018075           15 NMAAWLLGIK---TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS   91 (361)
Q Consensus        15 ~~~~~~~~~~---~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   91 (361)
                      |+++++.+++   .++++++|.|+|+++||||||+++|||++|++...|...  ....+|+++|||++|+|+++|++|++
T Consensus         1 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~~p~v~G~E~~G~V~~vG~~v~~   78 (343)
T 2eih_A            1 MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVAS--PKLPLPHVLGADGSGVVDAVGPGVEG   78 (343)
T ss_dssp             CEEEEECSSSSGGGEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSS--TTCCSSEECCSEEEEEEEEECSSCCS
T ss_pred             CeEEEEecCCCCceEEEEecCCCCCCCCEEEEEEEEEEeCHHHHHHhcCCCC--CCCCCCcccccceEEEEEEECCCCCC
Confidence            3556666554   399999999999999999999999999999998877432  11367999999999999999999999


Q ss_pred             CCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccc-ccchhHHHHHH
Q 018075           92 LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGA-MCEPLSVGVHA  170 (361)
Q Consensus        92 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa-~~~~~~~a~~~  170 (361)
                      |++||||++.+..+|+.|.+|+.|++++|++..+++. ...|+|+||++++++.++++|+++++++|| +..++.|||++
T Consensus        79 ~~vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~G~-~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~a  157 (343)
T 2eih_A           79 FAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGE-HRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQM  157 (343)
T ss_dssp             CCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTT-SSCCSSBSEEEEEGGGEEECCTTSCHHHHHHSHHHHHHHHHH
T ss_pred             CCCCCEEEECCCCCcccchhhccCcccccccccccCc-CCCccceeEEEeChHHeEECCCCCCHHHHhhchhhHHHHHHH
Confidence            9999999999988999999999999999999877653 347999999999999999999999999998 55689999999


Q ss_pred             HHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhc
Q 018075          171 CRR-ANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       171 l~~-~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      +++ +++++|++|||+|+ |++|++++|+++..|+ .|+++++++++.+.++++|++.++++..  .++.+.+.++.  .
T Consensus       158 l~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~ga~~~~d~~~--~~~~~~~~~~~--~  232 (343)
T 2eih_A          158 VVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKALGADETVNYTH--PDWPKEVRRLT--G  232 (343)
T ss_dssp             HTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEETTS--TTHHHHHHHHT--T
T ss_pred             HHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEcCCc--ccHHHHHHHHh--C
Confidence            977 68999999999996 9999999999999999 7899999999999999999998877543  35555555443  2


Q ss_pred             CCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC-cceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCC
Q 018075          249 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDV  326 (361)
Q Consensus       249 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~  326 (361)
                      +.++|++||++|. ..++.+++.|+++|+++.+|..... ..++...++.+++++.++... .++++++++++++|++  
T Consensus       233 ~~~~d~vi~~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~g~l--  309 (343)
T 2eih_A          233 GKGADKVVDHTGA-LYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMASKSRLFPILRFVEEGKL--  309 (343)
T ss_dssp             TTCEEEEEESSCS-SSHHHHHHHEEEEEEEEESSCCCSCCCCCCTTHHHHTTCEEEECCSCCGGGHHHHHHHHHHTSS--
T ss_pred             CCCceEEEECCCH-HHHHHHHHhhccCCEEEEEecCCCCcCccCHHHHHhCCcEEEEecCccHHHHHHHHHHHHcCCC--
Confidence            4589999999994 4899999999999999999976543 235566778899999998754 6789999999999999  


Q ss_pred             CCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          327 KPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       327 ~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      ++.++++|+|  +++++|++.+++++..||+|+++
T Consensus       310 ~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  342 (343)
T 2eih_A          310 KPVVGQVLPL--EAAAEGHRLLEERRVFGKVVLQV  342 (343)
T ss_dssp             CCCEEEEEEG--GGHHHHHHHHHTTCSSSEEEEEC
T ss_pred             CCceeEEeeH--HHHHHHHHHHHcCCCceEEEEec
Confidence            6788899999  99999999999988889999874

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=4.1e-54  Score=403.47  Aligned_cols=336  Identities=24%  Similarity=0.432  Sum_probs=285.6

Q ss_pred             cceEEEEeeCCceEEEEecCCCC-CC-----CcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCC
Q 018075           14 QNMAAWLLGIKTLKIQPYHLPTL-GP-----QDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGS   87 (361)
Q Consensus        14 ~~~~~~~~~~~~l~~~~~~~p~~-~~-----~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   87 (361)
                      +|+++++.+++.++++++|.|+| ++     +||+|||.++|||++|++...|..    ...+|+++|||++|+|+++|+
T Consensus         2 ~MkA~~~~~~~~l~~~~~p~P~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~~----~~~~p~v~GhE~~G~V~~vG~   77 (398)
T 2dph_A            2 GNKSVVYHGTRDLRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRF----IVPKGHVLGHEITGEVVEKGS   77 (398)
T ss_dssp             CEEEEEEEETTEEEEEEECCCCSEETTEECTTCEEEEEEEEECCHHHHHHHTTSS----CCCTTCBCCCCEEEEEEEECT
T ss_pred             ccEEEEEEcCCCEEEEEccCCCCCCCcCCCCCeEEEEEEEEeecHHHHHHhcCCC----CCCCCcccCCceEEEEEEECC
Confidence            46777778889999999999988 68     999999999999999999887742    246799999999999999999


Q ss_pred             CCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCC--cc------ccCC--CCCCCceeEEEEecCC--ceEECCCCCCc
Q 018075           88 EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPE--MR------FFGS--PPTNGSLAHKVVHPAK--LCYKLPDNVSL  155 (361)
Q Consensus        88 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~--~~------~~~~--~~~~g~~~~~~~~~~~--~~~~vP~~~~~  155 (361)
                      +|++|++||||++.+...|++|.+|+.|++++|++  ..      .++.  ....|+|+||++++++  .++++|+++++
T Consensus        78 ~v~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~  157 (398)
T 2dph_A           78 DVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYADYMLLKFGDKEQA  157 (398)
T ss_dssp             TCCSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTTBSSCCCSSBSEEEESSHHHHCEECSSHHHH
T ss_pred             CCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCccccccccccccccccCCCCceeeeeEEeccccCeEEECCCCCCh
Confidence            99999999999999888999999999999999997  21      1221  1247999999999987  89999999999


Q ss_pred             cc----cccc-chhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeec
Q 018075          156 EE----GAMC-EPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKV  230 (361)
Q Consensus       156 ~~----aa~~-~~~~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~  230 (361)
                      ++    ||.+ .++.|||++++.+++++|++|||+|+|++|++++|+||.+|+.+|++++++++++++++++|++ ++++
T Consensus       158 ~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~-~i~~  236 (398)
T 2dph_A          158 MEKIKDLTLISDILPTGFHGCVSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFE-TIDL  236 (398)
T ss_dssp             HHTHHHHTTTTTHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTTTCE-EEET
T ss_pred             hhhcchhhhhcCHHHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCc-EEcC
Confidence            87    6655 5899999999889999999999999999999999999999997799999999999999999995 6665


Q ss_pred             CCCccch-hHHHHHHHhhcCCCccEEEEccCChH--------------HHHHHHHhhcCCCEEEEEccCC----------
Q 018075          231 STDIEDV-DTDVGKIQNAMGSGIDVSFDCVGFDK--------------TMSTALNATRPGGKVCLIGLAK----------  285 (361)
Q Consensus       231 ~~~~~~~-~~~~~~~~~~~~~~~d~vld~~g~~~--------------~~~~~~~~l~~~G~~v~~g~~~----------  285 (361)
                      ..  .++ .+.++++.  .+.++|+|||++|+..              .++.++++|+++|+++.+|...          
T Consensus       237 ~~--~~~~~~~~~~~~--~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~~~~~~~~~~~~~  312 (398)
T 2dph_A          237 RN--SAPLRDQIDQIL--GKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIYVGSDPDPVNKD  312 (398)
T ss_dssp             TS--SSCHHHHHHHHH--SSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSCCCSCCSSCSSHH
T ss_pred             CC--cchHHHHHHHHh--CCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEecccccccccccccc
Confidence            43  344 55565553  3458999999999752              6899999999999999998652          


Q ss_pred             ---CCcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCC--CCCceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 018075          286 ---TEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKID--VKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF  359 (361)
Q Consensus       286 ---~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~--~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi  359 (361)
                         ....++...++.+++++.++... .+.++++++++++|+++  +.+.++++|+|  +++++|++.+.+++. +|+|+
T Consensus       313 ~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~~~~i~~~~~l--~~~~~A~~~~~~~~~-gKvvv  389 (398)
T 2dph_A          313 AGSGRLHLDFGKMWTKSIRIMTGMAPVTNYNRHLTEAILWDQMPYLSKVMNIEVITL--DQAPDGYAKFDKGSP-AKFVI  389 (398)
T ss_dssp             HHTTEEEEEHHHHHHTTCEEECSSCCGGGTHHHHHHHHHTTCCHHHHHHHCEEEECS--TTHHHHHHHHHTTCS-CEEEE
T ss_pred             ccCCcccccHHHHhhcCCEEEEeccCcHHHHHHHHHHHHcCCCCccchhhEEEEEcH--HHHHHHHHHHhcCCc-eEEEE
Confidence               22244555678899999887654 56799999999999996  55678899999  999999999999877 99998


Q ss_pred             eC
Q 018075          360 NL  361 (361)
Q Consensus       360 ~~  361 (361)
                      ++
T Consensus       390 ~~  391 (398)
T 2dph_A          390 DP  391 (398)
T ss_dssp             CT
T ss_pred             ec
Confidence            64

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=6.1e-53  Score=388.75  Aligned_cols=335  Identities=29%  Similarity=0.423  Sum_probs=288.2

Q ss_pred             ceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccc-----cccCCCCcccCcceeEEEEEeCCC
Q 018075           15 NMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCA-----NFIVKKPMVIGHECAGIIEEVGSE   88 (361)
Q Consensus        15 ~~~~~~~~~~-~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~-----~~~~~~p~~~G~e~~G~V~~vG~~   88 (361)
                      |+++++.+++ +++++++|.|+|+++||+|||.++|||++|++...|....     .....+|+++|||++|+|+++|++
T Consensus         1 Mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~   80 (347)
T 1jvb_A            1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDE   80 (347)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTT
T ss_pred             CeEEEEecCCCCeEEEEeeCCCCCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccceEEEEEECCC
Confidence            4566666764 7999999999999999999999999999999988764321     012367999999999999999999


Q ss_pred             CCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecC-CceEECCCCCCcccccccc-hhHH
Q 018075           89 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPA-KLCYKLPDNVSLEEGAMCE-PLSV  166 (361)
Q Consensus        89 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~vP~~~~~~~aa~~~-~~~~  166 (361)
                      |++|++||||+..+..+|++|.+|+.|++++|++...++. ...|+|+||+++++ +.++++ +++++++||.+. ++.+
T Consensus        81 v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~-~~~G~~aey~~v~~~~~~~~i-~~~~~~~aa~l~~~~~t  158 (347)
T 1jvb_A           81 VVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEYVIVPHYKYMYKL-RRLNAVEAAPLTCSGIT  158 (347)
T ss_dssp             CCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTT-TBCCSSBSEEEESCGGGEEEC-SSSCHHHHGGGGTHHHH
T ss_pred             CCCCCCCCEEEeCCCCCCCCChhhhCcCcccCcccccccc-cCCCcceeEEEecCccceEEe-CCCCHHHcccchhhHHH
Confidence            9999999999888888999999999999999998876653 45799999999999 999999 999999998554 6788


Q ss_pred             HHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHc-CCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHH
Q 018075          167 GVHACRRANVGPETNVMIMGS-GPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI  244 (361)
Q Consensus       167 a~~~l~~~~~~~g~~vlI~G~-g~~G~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~  244 (361)
                      ||+++++.++++|++|||+|+ |++|++++|+++.. |+ .|+++++++++.+.++++|++.++++..  .++.+.+.++
T Consensus       159 a~~~l~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga-~Vi~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~  235 (347)
T 1jvb_A          159 TYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKRAGADYVINASM--QDPLAEIRRI  235 (347)
T ss_dssp             HHHHHHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHHHHTCSEEEETTT--SCHHHHHHHH
T ss_pred             HHHHHHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHHhCCCEEecCCC--ccHHHHHHHH
Confidence            999998889999999999996 59999999999999 99 6899999999999999999998887543  4554445444


Q ss_pred             HhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCC-CCcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcC
Q 018075          245 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK-TEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSG  322 (361)
Q Consensus       245 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g  322 (361)
                      .  ...++|++||++|.+..++.++++|+++|+++.+|... .. .++...++.+++++.++... .++++++++++++|
T Consensus       236 ~--~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g  312 (347)
T 1jvb_A          236 T--ESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADL-HYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAG  312 (347)
T ss_dssp             T--TTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCC-CCCHHHHHHHTCEEEECCSCCHHHHHHHHHHHHTT
T ss_pred             h--cCCCceEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCC-CCCHHHHHhCceEEEEEeccCHHHHHHHHHHHHcC
Confidence            3  11489999999998878999999999999999999765 44 55666678899999998765 56799999999999


Q ss_pred             CCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          323 KIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       323 ~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      ++  ++.++++|+|  +++++|++.+++++..||+|+++
T Consensus       313 ~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvl~~  347 (347)
T 1jvb_A          313 KV--KPMITKTMKL--EEANEAIDNLENFKAIGRQVLIP  347 (347)
T ss_dssp             SS--CCCCEEEEEG--GGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             CC--CceEEEEEcH--HHHHHHHHHHHCCCCcceEEecC
Confidence            98  6778899999  99999999999998889999874

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.6e-53  Score=399.73  Aligned_cols=337  Identities=24%  Similarity=0.403  Sum_probs=281.9

Q ss_pred             cceEEEEeeCCceEEEEecCCCCC-CCc------EEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeC
Q 018075           14 QNMAAWLLGIKTLKIQPYHLPTLG-PQD------VKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVG   86 (361)
Q Consensus        14 ~~~~~~~~~~~~l~~~~~~~p~~~-~~e------VlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG   86 (361)
                      +|+++++.+++.++++++|.|+|+ ++|      |||||.++|||++|++...|..    ...+|+++|||++|+|+++|
T Consensus         2 ~Mka~~~~~~~~l~~~~~p~P~~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~----~~~~p~v~GhE~~G~V~~vG   77 (398)
T 1kol_A            2 GNRGVVYLGSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRT----TAQVGLVLGHEITGEVIEKG   77 (398)
T ss_dssp             CEEEEEEEETTEEEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCS----CCCTTCBCCCCEEEEEEEEC
T ss_pred             ccEEEEEecCCceEEEEecCCCCCCCCcccccceEEEEEEEEeechhhHHHHcCCC----CCCCCcccCcccEEEEEEEC
Confidence            467777778889999999999996 898      9999999999999999887642    23578999999999999999


Q ss_pred             CCCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCcc------ccCC---CCCCCceeEEEEecCC--ceEECCCCCCc
Q 018075           87 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMR------FFGS---PPTNGSLAHKVVHPAK--LCYKLPDNVSL  155 (361)
Q Consensus        87 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~---~~~~g~~~~~~~~~~~--~~~~vP~~~~~  155 (361)
                      ++|++|++||||++.+..+|+.|.+|+.|++++|++..      .++.   ..+.|+|+||++++++  .++++|+++++
T Consensus        78 ~~v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~~~~~P~~~~~  157 (398)
T 1kol_A           78 RDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKA  157 (398)
T ss_dssp             TTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCHHHH
T ss_pred             CCCCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeeccCCCCCceeeeEEEecchhCeEEECCCCcch
Confidence            99999999999999888899999999999999999864      1221   1356999999999987  89999999998


Q ss_pred             cc----cccc-chhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeec
Q 018075          156 EE----GAMC-EPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKV  230 (361)
Q Consensus       156 ~~----aa~~-~~~~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~  230 (361)
                      ++    |+.+ .++.|||++++++++++|++|||+|+|++|++++|+||.+|+++|++++.+++|.++++++|++ .+++
T Consensus       158 ~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lGa~-~i~~  236 (398)
T 1kol_A          158 MEKIRDLTCLSDILPTGYHGAVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFE-IADL  236 (398)
T ss_dssp             HHTHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCE-EEET
T ss_pred             hhhcccccccccHHHHHHHHHHHcCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcCCc-EEcc
Confidence            87    4544 5789999999888999999999999999999999999999997799999999999999999997 6665


Q ss_pred             CCCccchhHHHHHHHhhcCCCccEEEEccCCh---------------HHHHHHHHhhcCCCEEEEEccC-CC--------
Q 018075          231 STDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD---------------KTMSTALNATRPGGKVCLIGLA-KT--------  286 (361)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~---------------~~~~~~~~~l~~~G~~v~~g~~-~~--------  286 (361)
                      .. ..++.+.++++.  .+.++|+|||++|.+               ..++.++++|+++|+++.+|.. ..        
T Consensus       237 ~~-~~~~~~~v~~~t--~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~  313 (398)
T 1kol_A          237 SL-DTPLHEQIAALL--GEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAA  313 (398)
T ss_dssp             TS-SSCHHHHHHHHH--SSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSHH
T ss_pred             CC-cchHHHHHHHHh--CCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEeccccCCcccccccc
Confidence            43 223556665553  356899999999975               2789999999999999999865 11        


Q ss_pred             ----CcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCC-CCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075          287 ----EMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKID-VKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  360 (361)
Q Consensus       287 ----~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~-~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~  360 (361)
                          ...++...++.+++++.+.... .+.++++++++++|+++ ..+.++++|+|  +++++|++.+.+++. +|+|++
T Consensus       314 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~g~l~~~~~~i~~~~~l--~~~~~A~~~~~~~~~-gKvvi~  390 (398)
T 1kol_A          314 AKIGSLSIRFGLGWAKSHSFHTGQTPVMKYNRALMQAIMWDRINIAEVVGVQVISL--DDAPRGYGEFDAGVP-KKFVID  390 (398)
T ss_dssp             HHTTCCCCCHHHHHHTTCEEEESSCCHHHHHHHHHHHHHTTSCCHHHHHTEEEECG--GGHHHHHHHHHHTCS-CEEEEC
T ss_pred             cccccccccHHHHhhcccEEEecccChHHHHHHHHHHHHcCCCCCccceeEEEEcH--HHHHHHHHHHhCCCc-eEEEEE
Confidence                1233444567788898876443 45678899999999995 23567899999  999999999999877 999986


Q ss_pred             C
Q 018075          361 L  361 (361)
Q Consensus       361 ~  361 (361)
                      +
T Consensus       391 ~  391 (398)
T 1kol_A          391 P  391 (398)
T ss_dssp             T
T ss_pred             e
Confidence            4

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=100.00  E-value=1.4e-54  Score=401.15  Aligned_cols=327  Identities=19%  Similarity=0.294  Sum_probs=282.7

Q ss_pred             ceEEEEeeCCc-eEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCC---CcccCcceeEEEEEeCCCCC
Q 018075           15 NMAAWLLGIKT-LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKK---PMVIGHECAGIIEEVGSEVK   90 (361)
Q Consensus        15 ~~~~~~~~~~~-l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~---p~~~G~e~~G~V~~vG~~v~   90 (361)
                      |+++++.+++. ++++++|.|+|+++||||||+++|||++|++..+|....   ..+   |+++|||++| |+++|++ +
T Consensus         1 MkA~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~~~~p~v~G~E~~G-V~~vG~~-~   75 (357)
T 2b5w_A            1 MKAIAVKRGEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGG---FPEGEDHLVLGHEAVG-VVVDPND-T   75 (357)
T ss_dssp             CEEEEEETTCSSCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHSCSTT---SCTTCSEEECCSEEEE-EEEECTT-S
T ss_pred             CeEEEEeCCCCceEEEECCCCCCCcCEEEEEEeEEeechhcHHHHcCCCCC---CCCCCCCcccCceeEE-EEEECCC-C
Confidence            46677777766 999999999999999999999999999999998874321   245   8999999999 9999999 9


Q ss_pred             CCCCCCEEEecCCcC--CCCCccccCCCCCCCCCcccc--CCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHH
Q 018075           91 SLEVGDRVALEPGIS--CGHCSLCKAGSYNLCPEMRFF--GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSV  166 (361)
Q Consensus        91 ~~~~Gd~V~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~  166 (361)
                      +|++||||++.+...  |++|.+|+.|++++|++..++  +.....|+|+||++++++.++++|++++ ++|++..++.|
T Consensus        76 ~~~vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~~~-~~aal~~~~~t  154 (357)
T 2b5w_A           76 ELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRIPRSQA-ELGFLIEPISI  154 (357)
T ss_dssp             SCCTTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEEETTBEECCSCBSEEEEEGGGEEECCGGGS-TTGGGHHHHHH
T ss_pred             CCCCCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccccCccCCCcceeeEEEEchHHeEECCCCcc-hhhhhhchHHH
Confidence            999999999988777  999999999999999998766  4223479999999999999999999999 77777778999


Q ss_pred             HHHHHHhcCCCCC------CEEEEECCCHHHHHH-HHHH-HHcCCCEEEEEeCChh---HHHHHHHcCCCEEeecCCCcc
Q 018075          167 GVHACRRANVGPE------TNVMIMGSGPIGLVT-LLAA-RAFGAPRIIITDVDVQ---RLSIARNLGADETAKVSTDIE  235 (361)
Q Consensus       167 a~~~l~~~~~~~g------~~vlI~G~g~~G~~a-i~la-~~~g~~~vv~v~~~~~---~~~~~~~lg~~~~~~~~~~~~  235 (361)
                      ||++++++++++|      ++|||+|+|++|+++ +|+| |.+|+++|++++++++   +.++++++|++++ ++..  .
T Consensus       155 a~~al~~~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~lGa~~v-~~~~--~  231 (357)
T 2b5w_A          155 TEKALEHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEELDATYV-DSRQ--T  231 (357)
T ss_dssp             HHHHHHHHHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHHTTCEEE-ETTT--S
T ss_pred             HHHHHHhcCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHHcCCccc-CCCc--c
Confidence            9999977889999      999999999999999 9999 9999966999999998   9999999999988 7643  4


Q ss_pred             chhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCC-CCcceechHh----hhcCcEEEEeecC-C
Q 018075          236 DVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK-TEMTVALTPA----AAREVDVIGIFRY-R  309 (361)
Q Consensus       236 ~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~----~~~~~~i~~~~~~-~  309 (361)
                      ++.+ ++++   .+ ++|+|||++|++..++.++++|+++|+++.+|... ....++...+    +.+++++.++... .
T Consensus       232 ~~~~-i~~~---~g-g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~  306 (357)
T 2b5w_A          232 PVED-VPDV---YE-QMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAFHREMVLHNKALVGSVNSHV  306 (357)
T ss_dssp             CGGG-HHHH---SC-CEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHTTCEEEECCCCCH
T ss_pred             CHHH-HHHh---CC-CCCEEEECCCChHHHHHHHHHHhcCCEEEEEeCCCCCCceecHHHHhHHHHhCCeEEEEeccCCH
Confidence            5666 6554   24 89999999998778999999999999999999765 4445555566    7899999998765 5


Q ss_pred             CcHHHHHHHHHcC--CCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          310 STWPLCIEFLRSG--KIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       310 ~~~~~~~~~l~~g--~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      ++++++++++++|  ++ +.+.++++|+|  +++++|++.+   ...+|+|+++
T Consensus       307 ~~~~~~~~l~~~g~~~~-~~~~i~~~~~l--~~~~~A~~~~---~~~gKvvi~~  354 (357)
T 2b5w_A          307 EHFEAATVTFTKLPKWF-LEDLVTGVHPL--SEFEAAFDDD---DTTIKTAIEF  354 (357)
T ss_dssp             HHHHHHHHHHHHSCHHH-HHHHEEEEEEG--GGGGGGGCCS---TTCCEEEEEC
T ss_pred             HHHHHHHHHHHhCchhh-hhhhcceeecH--HHHHHHHHHh---CCCceEEEEe
Confidence            6899999999999  84 47888899999  9999999988   3578999874

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.4e-53  Score=393.92  Aligned_cols=331  Identities=21%  Similarity=0.306  Sum_probs=276.5

Q ss_pred             ccceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCC
Q 018075           13 NQNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS   91 (361)
Q Consensus        13 ~~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   91 (361)
                      +++++.+..++ +.++++++|.|+|+++||||||.++|||++|++...|...   ...+|+++|||++|+|+++|++|++
T Consensus        21 ~~~~a~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~~P~v~GhE~~G~V~~vG~~V~~   97 (369)
T 1uuf_A           21 LKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWA---GTVYPCVPGHEIVGRVVAVGDQVEK   97 (369)
T ss_dssp             --CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTS---CCCSSBCCCCCEEEEEEEECTTCCS
T ss_pred             ceEEEEEEcCCCCCcEEEEecCCCCCCCeEEEEEEEEeecHHHHHHhcCCCC---CCCCCeecccCceEEEEEECCCCCC
Confidence            34555555455 7899999999999999999999999999999998876432   1357999999999999999999999


Q ss_pred             CCCCCEEEecCCc-CCCCCccccCCCCCCCCCcc--ccC-----CCCCCCceeEEEEecCCceEECCCC-CCccccccc-
Q 018075           92 LEVGDRVALEPGI-SCGHCSLCKAGSYNLCPEMR--FFG-----SPPTNGSLAHKVVHPAKLCYKLPDN-VSLEEGAMC-  161 (361)
Q Consensus        92 ~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~-----~~~~~g~~~~~~~~~~~~~~~vP~~-~~~~~aa~~-  161 (361)
                      |++||||++.+.. .|++|.+|+.|++++|++..  +.+     +....|+|+||++++++.++++|++ +++++||.+ 
T Consensus        98 ~~vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~~G~~aeyv~v~~~~~~~~P~~~ls~~~aa~l~  177 (369)
T 1uuf_A           98 YAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLL  177 (369)
T ss_dssp             CCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCSCGGGHHHHGGGG
T ss_pred             CCCCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCCCCCCCcccceEEEcchhEEECCCCCCCHHHhhhhh
Confidence            9999999987764 69999999999999999862  211     1135799999999999999999999 999998866 


Q ss_pred             chhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHH
Q 018075          162 EPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDV  241 (361)
Q Consensus       162 ~~~~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~  241 (361)
                      .++.+||+++++.++++|++|||+|+|++|++++|+|+.+|+ .|++++.++++.++++++|++.++++..  .+   .+
T Consensus       178 ~~~~tA~~al~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~Vi~~~~~~~~~~~a~~lGa~~vi~~~~--~~---~~  251 (369)
T 1uuf_A          178 CAGITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKALGADEVVNSRN--AD---EM  251 (369)
T ss_dssp             THHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEETTC--HH---HH
T ss_pred             hhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCcEEecccc--HH---HH
Confidence            478899999988889999999999999999999999999999 5899999999999999999999887643  22   22


Q ss_pred             HHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCc-ceechHhhhcCcEEEEeecC-CCcHHHHHHHH
Q 018075          242 GKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM-TVALTPAAAREVDVIGIFRY-RSTWPLCIEFL  319 (361)
Q Consensus       242 ~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l  319 (361)
                      .++    ..++|+|||++|.+..++.++++|+++|+++.+|...... .++...++.+++++.+++.. .++++++++++
T Consensus       252 ~~~----~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~  327 (369)
T 1uuf_A          252 AAH----LKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEMLDFC  327 (369)
T ss_dssp             HTT----TTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEECCSCCHHHHHHHHHHH
T ss_pred             HHh----hcCCCEEEECCCCHHHHHHHHHHhccCCEEEEeccCCCCccccCHHHHHhCCcEEEEeecCCHHHHHHHHHHH
Confidence            222    1589999999998767899999999999999999765433 45556678899999998765 56789999999


Q ss_pred             HcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          320 RSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       320 ~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      ++|++  ++.+ +.|+|  +++++|++.+.+++..||+|+++
T Consensus       328 ~~g~i--~~~i-~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  364 (369)
T 1uuf_A          328 AEHGI--VADI-EMIRA--DQINEAYERMLRGDVKYRFVIDN  364 (369)
T ss_dssp             HHHTC--CCCE-EEECG--GGHHHHHHHHHTTCSSSEEEEEG
T ss_pred             HhCCC--Ccce-EEEcH--HHHHHHHHHHHcCCCceEEEEec
Confidence            99999  4445 56888  99999999999998889999864

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=6e-53  Score=390.00  Aligned_cols=331  Identities=24%  Similarity=0.355  Sum_probs=278.9

Q ss_pred             cccceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCC
Q 018075           12 KNQNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVK   90 (361)
Q Consensus        12 ~~~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   90 (361)
                      ++++++....++ +.++++++|.|+|+++||+|||.++|||++|++...|....   ..+|+++|||++|+|+++|++|+
T Consensus         7 ~m~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~P~v~GhE~~G~V~~vG~~v~   83 (357)
T 2cf5_A            7 ERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGM---SNYPMVPGHEVVGEVVEVGSDVS   83 (357)
T ss_dssp             CCEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHTCTTTC---CCSSBCCCCEEEEEEEEECSSCC
T ss_pred             cceeEEEEEccCCCCcEEEEecCCCCCCCEEEEEEEEEeecchhhhhhcCCCCC---CCCCeecCcceeEEEEEECCCCC
Confidence            345555555554 78999999999999999999999999999999988764321   36799999999999999999999


Q ss_pred             CCCCCCEEEecCC-cCCCCCccccCCCCCCCCCccccC------CCCCCCceeEEEEecCCceEECCCCCCcccccccc-
Q 018075           91 SLEVGDRVALEPG-ISCGHCSLCKAGSYNLCPEMRFFG------SPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-  162 (361)
Q Consensus        91 ~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-  162 (361)
                      +|++||||++.+. .+|++|.+|+.|++++|+...+..      +....|+|+||++++++.++++|+++++++||.+. 
T Consensus        84 ~~~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~  163 (357)
T 2cf5_A           84 KFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLC  163 (357)
T ss_dssp             SCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCTTSCBCCCSSBSCEEEEGGGEEECCSSCCHHHHTGGGT
T ss_pred             CCCCCCEEEEcCCCCCCCCChHHhCcCcccCCCccccccccccCCCCCCCccccEEEechhhEEECcCCCCHHHhhhhhh
Confidence            9999999987654 479999999999999997653321      11257999999999999999999999999988664 


Q ss_pred             hhHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHH-HcCCCEEeecCCCccchhHH
Q 018075          163 PLSVGVHACRRANVG-PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGADETAKVSTDIEDVDTD  240 (361)
Q Consensus       163 ~~~~a~~~l~~~~~~-~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~  240 (361)
                      ++.+||+++++.+++ +|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.++ ++|++.++++..     .+.
T Consensus       164 ~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~-----~~~  237 (357)
T 2cf5_A          164 AGVTVYSPLSHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSNKKREEALQDLGADDYVIGSD-----QAK  237 (357)
T ss_dssp             HHHHHHHHHHHTSTTSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSTTHHHHHHTTSCCSCEEETTC-----HHH
T ss_pred             hHHHHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHcCCceeecccc-----HHH
Confidence            778899999888888 99999999999999999999999999 7899999999998888 899998887542     123


Q ss_pred             HHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcc-eechHhhhcCcEEEEeecC-CCcHHHHHHH
Q 018075          241 VGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMT-VALTPAAAREVDVIGIFRY-RSTWPLCIEF  318 (361)
Q Consensus       241 ~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~  318 (361)
                      ++++    ..++|+|||++|.+..++.++++|+++|+++.+|....... ++.. ++.+++++.+++.+ .+++++++++
T Consensus       238 ~~~~----~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~~~~~~~l  312 (357)
T 2cf5_A          238 MSEL----ADSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPL-LMLGRKVITGSFIGSMKETEEMLEF  312 (357)
T ss_dssp             HHHS----TTTEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCCSSCCCCCHHH-HHHHTCEEEECCSCCHHHHHHHHHH
T ss_pred             HHHh----cCCCCEEEECCCChHHHHHHHHHhccCCEEEEeCCCCCCccccCHH-HHhCccEEEEEccCCHHHHHHHHHH
Confidence            3333    24799999999976578999999999999999997654333 4444 78899999998765 4678999999


Q ss_pred             HHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          319 LRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       319 l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      +++|+++  +.+ ++|+|  +++++|++.+++++..||+|+++
T Consensus       313 ~~~g~l~--~~~-~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  350 (357)
T 2cf5_A          313 CKEKGLS--SII-EVVKM--DYVNTAFERLEKNDVRYRFVVDV  350 (357)
T ss_dssp             HHHTTCC--CCE-EEEEG--GGHHHHHHHHHTTCSSSEEEEET
T ss_pred             HHcCCCC--Cce-EEEeH--HHHHHHHHHHHCCCCceEEEEeC
Confidence            9999994  444 78999  99999999999998889999874

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=100.00  E-value=6e-52  Score=384.45  Aligned_cols=320  Identities=23%  Similarity=0.321  Sum_probs=273.3

Q ss_pred             CCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecC
Q 018075           23 IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEP  102 (361)
Q Consensus        23 ~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~  102 (361)
                      ++.++++++|.|+|+++||+|||.++|||++|++...|....   ..+|+++|||++|+|+++|++|++|++||||++.+
T Consensus        26 ~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~P~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~  102 (366)
T 1yqd_A           26 SGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGF---SMYPLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGC  102 (366)
T ss_dssp             TCCEEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHHTSSSC---CCSSBCCCCCEEEEEEEECTTCCSCCTTCEEEECS
T ss_pred             CCCcEEEEccCCCCCCCeEEEEEEEEeechhhHHHHcCCCCC---CCCCEecccceEEEEEEECCCCCcCCCCCEEEEcC
Confidence            478999999999999999999999999999999988764321   35799999999999999999999999999999765


Q ss_pred             C-cCCCCCccccCCCCCCCCCccccC------CCCCCCceeEEEEecCCceEECCCCCCcccccccc-hhHHHHHHHHhc
Q 018075          103 G-ISCGHCSLCKAGSYNLCPEMRFFG------SPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRRA  174 (361)
Q Consensus       103 ~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-~~~~a~~~l~~~  174 (361)
                      . .+|++|.+|+.|++++|+...+..      +....|+|+||++++++.++++|+++++++||.+. ++.+||+++++.
T Consensus       103 ~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~al~~~  182 (366)
T 1yqd_A          103 LVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPLKYF  182 (366)
T ss_dssp             EEECCSSSHHHHTTCGGGCTTCEESSSSBCTTSCBCCCSSBSEEEEEGGGCEECCTTSCTTTTGGGGTHHHHHHHHHHHT
T ss_pred             CcCCCCCChhhhCcCcccCCcccccccccccCCCcCCCccccEEEEchhhEEECCCCCCHHHhhhhhhhHHHHHHHHHhc
Confidence            4 589999999999999997653211      11257999999999999999999999999998664 778899999888


Q ss_pred             CCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHH-HcCCCEEeecCCCccchhHHHHHHHhhcCCCc
Q 018075          175 NVG-PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGADETAKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       175 ~~~-~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      +++ +|++|||+|+|++|++++|+|+.+|+ +|+++++++++.+.++ ++|++.++++..  .   +.+.++.    .++
T Consensus       183 ~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~--~---~~~~~~~----~~~  252 (366)
T 1yqd_A          183 GLDEPGKHIGIVGLGGLGHVAVKFAKAFGS-KVTVISTSPSKKEEALKNFGADSFLVSRD--Q---EQMQAAA----GTL  252 (366)
T ss_dssp             TCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGHHHHHHTSCCSEEEETTC--H---HHHHHTT----TCE
T ss_pred             CcCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCCceEEeccC--H---HHHHHhh----CCC
Confidence            888 99999999999999999999999999 7889999999988877 899998887542  1   2333332    489


Q ss_pred             cEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCCCceE
Q 018075          253 DVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLIT  331 (361)
Q Consensus       253 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~  331 (361)
                      |+|||++|.+..++.++++|+++|+++.+|.......++...++.+++++.+++.. .++++++++++++|+++  +.+ 
T Consensus       253 D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~--~~~-  329 (366)
T 1yqd_A          253 DGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPAFSLIAGRKIVAGSGIGGMKETQEMIDFAAKHNIT--ADI-  329 (366)
T ss_dssp             EEEEECCSSCCCSHHHHHHEEEEEEEEECCCCSSCEEECHHHHHTTTCEEEECCSCCHHHHHHHHHHHHHTTCC--CCE-
T ss_pred             CEEEECCCcHHHHHHHHHHHhcCCEEEEEccCCCCCCcCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcCCCC--Cce-
Confidence            99999999765689999999999999999976655456666778899999998765 46789999999999994  444 


Q ss_pred             EEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075          332 HRFGFTQKEIEDAFEISAQGGNAIKVMFN  360 (361)
Q Consensus       332 ~~~~l~~~~~~~a~~~l~~~~~~gkvvi~  360 (361)
                      ++|+|  +++++|++.+++++..||+|++
T Consensus       330 ~~~~l--~~~~~A~~~~~~~~~~gKvvl~  356 (366)
T 1yqd_A          330 EVIST--DYLNTAMERLAKNDVRYRFVID  356 (366)
T ss_dssp             EEECG--GGHHHHHHHHHTTCCSSEEEEC
T ss_pred             EEEcH--HHHHHHHHHHHcCCcceEEEEE
Confidence            68899  9999999999999888999986

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=1.3e-51  Score=392.32  Aligned_cols=346  Identities=19%  Similarity=0.214  Sum_probs=286.6

Q ss_pred             cCCcccceEEEEeeCC--------------ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhc-------------cc
Q 018075            9 EGDKNQNMAAWLLGIK--------------TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFK-------------TM   61 (361)
Q Consensus         9 ~~~~~~~~~~~~~~~~--------------~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~-------------g~   61 (361)
                      ..+|++|+++++.+++              .++++++|.|+|+++||+|||.++|||++|++...             +.
T Consensus        19 ~~~p~tmkA~v~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~~~~   98 (447)
T 4a0s_A           19 APVPDTYLALHLRAEDADMFKGVADKDVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNAR   98 (447)
T ss_dssp             SCCCSEEEEEEEEGGGTTTTTTCSSCCHHHHCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHHHHT
T ss_pred             cCCChhheeeeeeccccccccccccCCCCCCceEEeccCCCCCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhhhcc
Confidence            4678888998888776              79999999999999999999999999999986432             11


Q ss_pred             ccc-cccCCCC-cccCcceeEEEEEeCCCCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEE
Q 018075           62 RCA-NFIVKKP-MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKV  139 (361)
Q Consensus        62 ~~~-~~~~~~p-~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  139 (361)
                      ... ......| .++|||++|+|+++|++|++|++||||++.+...|+.|..| .+.+..|++..+++.....|+|+||+
T Consensus        99 ~g~~~~~~~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~~~-~~~~~~c~~~~~~G~~~~~G~~aey~  177 (447)
T 4a0s_A           99 QGGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEPAT-HGDGMLGTEQRAWGFETNFGGLAEYG  177 (447)
T ss_dssp             TCGGGGGGCCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSEECCTTSGGG-GTCTTCSTTCEETTTTSSSCSSBSEE
T ss_pred             cCccccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEecCcCcCccccc-ccccccccccccccccCCCCceeeee
Confidence            100 0112456 69999999999999999999999999999888777776644 57789999998888755579999999


Q ss_pred             EecCCceEECCCCCCcccccccc-hhHHHHHHHH---hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChh
Q 018075          140 VHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACR---RANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQ  214 (361)
Q Consensus       140 ~~~~~~~~~vP~~~~~~~aa~~~-~~~~a~~~l~---~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~  214 (361)
                      +++++.++++|+++++++||+++ ++.+||+++.   .+++++|++|||+|+ |++|++++|+|+..|+ .+++++.+++
T Consensus       178 ~v~~~~~~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga-~vi~~~~~~~  256 (447)
T 4a0s_A          178 VVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGG-IPVAVVSSAQ  256 (447)
T ss_dssp             EEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSHH
T ss_pred             ecCHHHcEECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHH
Confidence            99999999999999999999664 7788999984   388999999999996 9999999999999999 6778889999


Q ss_pred             HHHHHHHcCCCEEeecCCCcc-------------chhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEE
Q 018075          215 RLSIARNLGADETAKVSTDIE-------------DVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       215 ~~~~~~~lg~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~  281 (361)
                      +.++++++|++.++++.....             +.......+.+..+.++|++||++|.+ .++.++++|+++|+++.+
T Consensus       257 ~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~~-~~~~~~~~l~~~G~iv~~  335 (447)
T 4a0s_A          257 KEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRV-TFGLSVIVARRGGTVVTC  335 (447)
T ss_dssp             HHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSCHH-HHHHHHHHSCTTCEEEES
T ss_pred             HHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHHHHHHhCCCceEEEECCCch-HHHHHHHHHhcCCEEEEE
Confidence            999999999998877532110             001112233333367899999999975 899999999999999999


Q ss_pred             ccCCC-CcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEE
Q 018075          282 GLAKT-EMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMF  359 (361)
Q Consensus       282 g~~~~-~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi  359 (361)
                      |.... ...++...++.+..++.+++.. .+++.++++++++|++  ++.++++|+|  +++++|++.+.+++..||+|+
T Consensus       336 G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~GKvvv  411 (447)
T 4a0s_A          336 GSSSGYLHTFDNRYLWMKLKKIVGSHGANHEEQQATNRLFESGAV--VPAMSAVYPL--AEAAEACRVVQTSRQVGKVAV  411 (447)
T ss_dssp             CCTTCSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSS--CCCEEEEEEG--GGHHHHHHHHHTTCCSSEEEE
T ss_pred             ecCCCcccccCHHHHHhCCCEEEecCCCCHHHHHHHHHHHHcCCc--ccceeEEEcH--HHHHHHHHHHhcCCCceEEEE
Confidence            96654 3456666788899999998766 4578899999999999  6788899999  999999999999999999988


Q ss_pred             eC
Q 018075          360 NL  361 (361)
Q Consensus       360 ~~  361 (361)
                      .+
T Consensus       412 ~~  413 (447)
T 4a0s_A          412 LC  413 (447)
T ss_dssp             ES
T ss_pred             Ee
Confidence            63

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=8.4e-52  Score=394.11  Aligned_cols=343  Identities=21%  Similarity=0.196  Sum_probs=288.5

Q ss_pred             CCcccceEEEEeeC----------------CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhccccc----------
Q 018075           10 GDKNQNMAAWLLGI----------------KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRC----------   63 (361)
Q Consensus        10 ~~~~~~~~~~~~~~----------------~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~----------   63 (361)
                      .+|.+|+++++.++                +.++++++|.|+|+++||||||.++|||++|++...+...          
T Consensus        26 ~iP~tmkA~v~~~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~~~~g  105 (456)
T 3krt_A           26 PLPESYRAITVHKDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYG  105 (456)
T ss_dssp             CCCSCEEEEEEEGGGTTTTTTCCGGGCCHHHHCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHHHHHH
T ss_pred             CCCcceEEEEEeccccccccccccccCCCCCCcEEEEccCCCCCCCeEEEEEEEEEecchhhhhhhcCcccchhhhhhcc
Confidence            46778888888865                5799999999999999999999999999999876432100          


Q ss_pred             --c--cccCCCC-cccCcceeEEEEEeCCCCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEE
Q 018075           64 --A--NFIVKKP-MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHK  138 (361)
Q Consensus        64 --~--~~~~~~p-~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  138 (361)
                        +  ......| .++|||++|+|+++|++|++|++||||++.+. .|+.|..|..+++..|++..+++.....|+|+||
T Consensus       106 ~~~~~~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~-~c~~~~~~~~~~~~~c~~~~~~G~~~~~G~~aey  184 (456)
T 3krt_A          106 RVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCL-SVELESSDGHNDTMLDPEQRIWGFETNFGGLAEI  184 (456)
T ss_dssp             TSCHHHHTTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECCE-ECCCCSGGGTTSGGGCTTCEETTTTSSSCSSBSE
T ss_pred             ccccccccCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeCC-cccccccccccccccCccccccccCCCCCcccce
Confidence              0  0112456 69999999999999999999999999998643 6788888888999999999988876667999999


Q ss_pred             EEecCCceEECCCCCCcccccccc-hhHHHHHHHHh---cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075          139 VVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACRR---ANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDV  213 (361)
Q Consensus       139 ~~~~~~~~~~vP~~~~~~~aa~~~-~~~~a~~~l~~---~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~  213 (361)
                      ++++++.++++|+++++++||++. ++.+||+++..   +++++|++|||+|+ |++|++++|+|+.+|+ .++++++++
T Consensus       185 ~~v~~~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~Ga-~vi~~~~~~  263 (456)
T 3krt_A          185 ALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGA-NPICVVSSP  263 (456)
T ss_dssp             EEEEGGGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSH
T ss_pred             EEechHHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEECCH
Confidence            999999999999999999999765 78899999843   78999999999996 9999999999999999 677788899


Q ss_pred             hHHHHHHHcCCCEEeecCCCcc---------------chhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEE
Q 018075          214 QRLSIARNLGADETAKVSTDIE---------------DVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKV  278 (361)
Q Consensus       214 ~~~~~~~~lg~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~  278 (361)
                      ++.++++++|++.++++...+.               ++.+.++++.  .+.++|+|||++|+ ..+..++++|+++|++
T Consensus       264 ~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t--~g~g~Dvvid~~G~-~~~~~~~~~l~~~G~i  340 (456)
T 3krt_A          264 QKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELT--GGEDIDIVFEHPGR-ETFGASVFVTRKGGTI  340 (456)
T ss_dssp             HHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHH--TSCCEEEEEECSCH-HHHHHHHHHEEEEEEE
T ss_pred             HHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHh--CCCCCcEEEEcCCc-hhHHHHHHHhhCCcEE
Confidence            9999999999999988654211               1123444332  35799999999997 5999999999999999


Q ss_pred             EEEccCCC-CcceechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceE
Q 018075          279 CLIGLAKT-EMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIK  356 (361)
Q Consensus       279 v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gk  356 (361)
                      +.+|.... ...++...+..+..++.|++.. .+++.++++++++|++  ++.++++|+|  +++++|++.+.+++..||
T Consensus       341 v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~eA~~~l~~~~~~GK  416 (456)
T 3krt_A          341 TTCASTSGYMHEYDNRYLWMSLKRIIGSHFANYREAWEANRLIAKGRI--HPTLSKVYSL--EDTGQAAYDVHRNLHQGK  416 (456)
T ss_dssp             EESCCTTCSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSS--CCCEEEEEEG--GGHHHHHHHHHTTCSSSE
T ss_pred             EEEecCCCcccccCHHHHHhcCeEEEEeccCCHHHHHHHHHHHHcCCc--ccceeEEEcH--HHHHHHHHHHHhCCCCCc
Confidence            99997654 3456667788899999998765 4567789999999999  6788899999  999999999999999999


Q ss_pred             EEEeC
Q 018075          357 VMFNL  361 (361)
Q Consensus       357 vvi~~  361 (361)
                      +|+.+
T Consensus       417 vvv~~  421 (456)
T 3krt_A          417 VGVLC  421 (456)
T ss_dssp             EEEES
T ss_pred             EEEEe
Confidence            98863

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=9e-51  Score=374.89  Aligned_cols=312  Identities=23%  Similarity=0.319  Sum_probs=271.4

Q ss_pred             cCCcccceEEEEee---CCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEe
Q 018075            9 EGDKNQNMAAWLLG---IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEV   85 (361)
Q Consensus         9 ~~~~~~~~~~~~~~---~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v   85 (361)
                      ..||++|+++++.+   ++.++++++|.|+|+++||+|||.++|||++|++...|...  ....+|.++|||++|+|+++
T Consensus        23 ~~~p~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~~p~i~G~E~~G~V~~v  100 (353)
T 4dup_A           23 MSLPQEMRFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYP--PPKDASPILGLELSGEIVGV  100 (353)
T ss_dssp             CCCCSSEEEEEESSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTSSC--CCTTSCSSSCCEEEEEEEEE
T ss_pred             CCCChheeEEEEccCCCccceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhCCCCC--CCCCCCCccccccEEEEEEE
Confidence            34777788877775   56799999999999999999999999999999999887542  22356899999999999999


Q ss_pred             CCCCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chh
Q 018075           86 GSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPL  164 (361)
Q Consensus        86 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~  164 (361)
                      |++|++|++||||+..                            ...|+|+||++++++.++++|+++++++||.+ .++
T Consensus       101 G~~v~~~~vGdrV~~~----------------------------~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~  152 (353)
T 4dup_A          101 GPGVSGYAVGDKVCGL----------------------------ANGGAYAEYCLLPAGQILPFPKGYDAVKAAALPETF  152 (353)
T ss_dssp             CTTCCSCCTTCEEEEE----------------------------CSSCCSBSEEEEEGGGEEECCTTCCHHHHHTSHHHH
T ss_pred             CCCCCCCCCCCEEEEe----------------------------cCCCceeeEEEEcHHHcEeCCCCCCHHHHhhhhhHH
Confidence            9999999999999863                            23699999999999999999999999999855 589


Q ss_pred             HHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHH
Q 018075          165 SVGVHAC-RRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVG  242 (361)
Q Consensus       165 ~~a~~~l-~~~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~  242 (361)
                      .+||+++ +.+++++|++|||+| +|++|++++|+|+..|+ +|+++++++++.++++++|++.++++..  .++.+.+.
T Consensus       153 ~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~~~~~--~~~~~~~~  229 (353)
T 4dup_A          153 FTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACERLGAKRGINYRS--EDFAAVIK  229 (353)
T ss_dssp             HHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEETTT--SCHHHHHH
T ss_pred             HHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEEEeCCc--hHHHHHHH
Confidence            9999999 458999999999996 79999999999999999 7999999999999999999999888643  56666666


Q ss_pred             HHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC-cc-eechHhhhcCcEEEEeecCC-Cc--------
Q 018075          243 KIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MT-VALTPAAAREVDVIGIFRYR-ST--------  311 (361)
Q Consensus       243 ~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~-~~~~~~~~~~~~i~~~~~~~-~~--------  311 (361)
                      ++.   +.++|++|||+|++ .++.++++|+++|+++.+|..... .. ++...+..+++++.++.... ..        
T Consensus       230 ~~~---~~g~Dvvid~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~  305 (353)
T 4dup_A          230 AET---GQGVDIILDMIGAA-YFERNIASLAKDGCLSIIAFLGGAVAEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAIRD  305 (353)
T ss_dssp             HHH---SSCEEEEEESCCGG-GHHHHHHTEEEEEEEEECCCTTCSEEEEEECHHHHHTTCEEEECCSTTSCHHHHHHHHH
T ss_pred             HHh---CCCceEEEECCCHH-HHHHHHHHhccCCEEEEEEecCCCcccCCCHHHHHhcCceEEEEeccccchhhhHHHHH
Confidence            553   67899999999976 899999999999999999976543 23 66778889999999987652 22        


Q ss_pred             --HHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          312 --WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       312 --~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                        ++++++++++|++  ++.++++|+|  +++++|++.+++++..||+|+++
T Consensus       306 ~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~l~~~~~~gKvvl~~  353 (353)
T 4dup_A          306 DLLSEVWPLLEAGTV--APVIHKVFAF--EDVADAHRLLEEGSHVGKVMLTV  353 (353)
T ss_dssp             HHHHHTHHHHHHTSS--CCCEEEEEEG--GGHHHHHHHHHHTCCSSEEEEEC
T ss_pred             HHHHHHHHHHHCCCc--cCCcceEEeH--HHHHHHHHHHHhCCCCceEEEeC
Confidence              7789999999998  7788899999  99999999999999999999975

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=100.00  E-value=7.4e-52  Score=384.09  Aligned_cols=328  Identities=20%  Similarity=0.335  Sum_probs=278.5

Q ss_pred             ceEEEEeeCCc-eEEEEecCCCCCC-CcEEEEEeeeecCcchhhhhcc--cccccccCCC---CcccCcceeEEEEEeCC
Q 018075           15 NMAAWLLGIKT-LKIQPYHLPTLGP-QDVKVRIKALGICGSDVHHFKT--MRCANFIVKK---PMVIGHECAGIIEEVGS   87 (361)
Q Consensus        15 ~~~~~~~~~~~-l~~~~~~~p~~~~-~eVlV~v~~~~l~~~D~~~~~g--~~~~~~~~~~---p~~~G~e~~G~V~~vG~   87 (361)
                      |+++++.+++. ++++++|.|+|++ +||+|||.++|||++|++...|  ...   ...+   |+++|||++|+|++  +
T Consensus         1 MkA~~~~~~g~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~---~~~~~~~p~v~G~E~~G~V~~--~   75 (366)
T 2cdc_A            1 MKAIIVKPPNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLS---TLPKGKDFLVLGHEAIGVVEE--S   75 (366)
T ss_dssp             CEEEEECTTSCCCEEEECCGGGSCCCSSEEEEEEEEEECHHHHHHHTTCC----------CCSCEECCSEEEEEECS--C
T ss_pred             CeEEEEeCCCCceEEEECcCCCCCCCCEEEEEEEEEeeccccHHHHcCCCCCC---CCCcCCCCCcCCcceEEEEEe--C
Confidence            45666777665 9999999999999 9999999999999999998887  321   1245   89999999999999  6


Q ss_pred             CCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCcccc--CCCCCCCceeEEEEecCCceEECCCCCCcccccccchhH
Q 018075           88 EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF--GSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLS  165 (361)
Q Consensus        88 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~  165 (361)
                      + ++|++||||++.+..+|++|.+|+.|++++|++..++  +.....|+|+||++++++.++++|++++ ++|+++.++.
T Consensus        76 ~-~~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~iP~~l~-~~Aal~~~~~  153 (366)
T 2cdc_A           76 Y-HGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYDDPKYLVKIPKSIE-DIGILAQPLA  153 (366)
T ss_dssp             C-SSCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCCEEETTBEECCSCBSEEEECGGGEEEECGGGT-TTGGGHHHHH
T ss_pred             C-CCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCcccCCccCCCCceeEEEEechHHeEECcCCcc-hhhhhcCcHH
Confidence            7 8899999999999899999999999999999987665  3211479999999999999999999999 8888777999


Q ss_pred             HHHHHHH-----hcCCC--C-------CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh---hHHHHHHHcCCCEEe
Q 018075          166 VGVHACR-----RANVG--P-------ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV---QRLSIARNLGADETA  228 (361)
Q Consensus       166 ~a~~~l~-----~~~~~--~-------g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~---~~~~~~~~lg~~~~~  228 (361)
                      +||++++     .++++  +       |++|||+|+|++|++++|+|+..|+ .|+++++++   ++.++++++|++.+ 
T Consensus       154 ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~~~ga~~v-  231 (366)
T 2cdc_A          154 DIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREPTEVEQTVIEETKTNYY-  231 (366)
T ss_dssp             HHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCCCHHHHHHHHHHTCEEE-
T ss_pred             HHHHHHHhhhhcccCccccccccccCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCccchHHHHHHHHhCCcee-
Confidence            9999997     77888  8       9999999999999999999999999 799999988   89999999999877 


Q ss_pred             ecCCCccchhHHHHHHHhhcCCCccEEEEccCChHHH-HHHHHhhcCCCEEEEEccCCCC-cceechH---hhhcCcEEE
Q 018075          229 KVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTM-STALNATRPGGKVCLIGLAKTE-MTVALTP---AAAREVDVI  303 (361)
Q Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~-~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~---~~~~~~~i~  303 (361)
                      + .+   ++.+.+.+ .  . .++|++||++|.+..+ +.+++.|+++|+++.+|..... ..++...   ++.+++++.
T Consensus       232 ~-~~---~~~~~~~~-~--~-~~~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~  303 (366)
T 2cdc_A          232 N-SS---NGYDKLKD-S--V-GKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTSGSVPLDYKTLQEIVHTNKTII  303 (366)
T ss_dssp             E-CT---TCSHHHHH-H--H-CCEEEEEECCCCCTHHHHHHGGGEEEEEEEEECSCCCSCEEEEEHHHHHHHHHTTCEEE
T ss_pred             c-hH---HHHHHHHH-h--C-CCCCEEEECCCChHHHHHHHHHHHhcCCEEEEEecCCCCccccChhhhHHHHhcCcEEE
Confidence            5 32   55555554 2  2 6899999999987678 9999999999999999976544 4556666   788999999


Q ss_pred             EeecC-CCcHHHHHHHHHcCCCC----CCCceEEEecCChhhHHHHHHHH-hcCCCceEEEEeC
Q 018075          304 GIFRY-RSTWPLCIEFLRSGKID----VKPLITHRFGFTQKEIEDAFEIS-AQGGNAIKVMFNL  361 (361)
Q Consensus       304 ~~~~~-~~~~~~~~~~l~~g~~~----~~~~~~~~~~l~~~~~~~a~~~l-~~~~~~gkvvi~~  361 (361)
                      |+... .++++++++++++|+++    +++.++++|+|  +++++|++.+ .++...+|+|+++
T Consensus       304 g~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~i~~~~~l--~~~~~A~~~l~~~~~~~gKvvi~~  365 (366)
T 2cdc_A          304 GLVNGQKPHFQQAVVHLASWKTLYPKAAKMLITKTVSI--NDEKELLKVLREKEHGEIKIRILW  365 (366)
T ss_dssp             ECCCCCHHHHHHHHHHHHHHHHHSHHHHTTSEEEEEET--TCHHHHHHHHHCCCTTCCEEEEEC
T ss_pred             EecCCCHHHHHHHHHHHHcCCCCcccchhhcEEEEEcH--HHHHHHHHHHhhhcCCceEEEEec
Confidence            98765 56799999999999965    58888999999  9999999993 3356789999874

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=1.1e-49  Score=365.27  Aligned_cols=308  Identities=23%  Similarity=0.298  Sum_probs=264.6

Q ss_pred             CcccceEEEEeeCC---ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCC
Q 018075           11 DKNQNMAAWLLGIK---TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGS   87 (361)
Q Consensus        11 ~~~~~~~~~~~~~~---~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   87 (361)
                      +|++|+++++.+++   .++++++|.|+|++|||||||+++|||++|++...|..    +.++|+++|||++|+|+++|+
T Consensus         5 ~p~~mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~----~~~~P~i~G~e~~G~V~~vG~   80 (334)
T 3qwb_A            5 IPEQQKVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIY----PCEKPYVLGREASGTVVAKGK   80 (334)
T ss_dssp             CCSEEEEEEESSSSSGGGEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHHTSS----CCCSSEECCSEEEEEEEEECT
T ss_pred             CchheEEEEEecCCCCceeEEEeccCCCCCCCEEEEEEEEEecCHHHHHHHCCCC----CCCCCCccccceEEEEEEECC
Confidence            56777777777553   49999999999999999999999999999999887643    246799999999999999999


Q ss_pred             CCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEec-CCceEECCCCCCccc---cc-ccc
Q 018075           88 EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHP-AKLCYKLPDNVSLEE---GA-MCE  162 (361)
Q Consensus        88 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~vP~~~~~~~---aa-~~~  162 (361)
                      +|++|++||||+..                             ..|+|+||++++ ++.++++|+++++++   |+ +..
T Consensus        81 ~v~~~~~GdrV~~~-----------------------------~~G~~aey~~v~~~~~~~~~P~~~~~~~~~~aa~~~~  131 (334)
T 3qwb_A           81 GVTNFEVGDQVAYI-----------------------------SNSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAGLL  131 (334)
T ss_dssp             TCCSCCTTCEEEEE-----------------------------CSSCSBSEEEEETTSSEEECCTTCCHHHHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEe-----------------------------eCCcceEEEEecCcceEEECCCCCCHHHhhhhhhhhh
Confidence            99999999999863                             269999999999 999999999999999   65 445


Q ss_pred             hhHHHHHHHHh-cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHH
Q 018075          163 PLSVGVHACRR-ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTD  240 (361)
Q Consensus       163 ~~~~a~~~l~~-~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~  240 (361)
                      ...+||+++.+ .++++|++|||+| +|++|++++|+|+..|+ +|+++++++++.++++++|++.++++..  .++.+.
T Consensus       132 ~~~ta~~~l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~~~~~--~~~~~~  208 (334)
T 3qwb_A          132 QVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLKIAKEYGAEYLINASK--EDILRQ  208 (334)
T ss_dssp             HHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTT--SCHHHH
T ss_pred             HHHHHHHHHHHhccCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCcEEEeCCC--chHHHH
Confidence            77889999876 7899999999999 79999999999999999 7999999999999999999999888643  566666


Q ss_pred             HHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC-cceechHhhhcCcEEEEeecC---------CC
Q 018075          241 VGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY---------RS  310 (361)
Q Consensus       241 ~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~---------~~  310 (361)
                      +.++.  .+.++|++||++|.. .++.++++|+++|+++.+|..... ..++...+..+++++.++...         .+
T Consensus       209 ~~~~~--~~~g~D~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (334)
T 3qwb_A          209 VLKFT--NGKGVDASFDSVGKD-TFEISLAALKRKGVFVSFGNASGLIPPFSITRLSPKNITLVRPQLYGYIADPEEWKY  285 (334)
T ss_dssp             HHHHT--TTSCEEEEEECCGGG-GHHHHHHHEEEEEEEEECCCTTCCCCCBCGGGGTTTTCEEECCCGGGGSCSHHHHHH
T ss_pred             HHHHh--CCCCceEEEECCChH-HHHHHHHHhccCCEEEEEcCCCCCCCCcchhhhhhCceEEEEEEeccccCCHHHHHH
Confidence            65553  356899999999975 899999999999999999976543 356666778889999876432         22


Q ss_pred             cHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          311 TWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       311 ~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      .++++++++++|++  ++.++++|+|  +++++|++.+.+++..||+|+++
T Consensus       286 ~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  332 (334)
T 3qwb_A          286 YSDEFFGLVNSKKL--NIKIYKTYPL--RDYRTAAADIESRKTVGKLVLEI  332 (334)
T ss_dssp             HHHHHHHHHHTTSS--CCCEEEEEEG--GGHHHHHHHHHTTCCCBEEEEEC
T ss_pred             HHHHHHHHHHCCCc--cCceeeEEcH--HHHHHHHHHHHhCCCceEEEEec
Confidence            34789999999999  5558899999  99999999999999999999975

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=5e-50  Score=368.31  Aligned_cols=308  Identities=21%  Similarity=0.285  Sum_probs=260.1

Q ss_pred             CCcccceEEEEee---CCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeC
Q 018075           10 GDKNQNMAAWLLG---IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVG   86 (361)
Q Consensus        10 ~~~~~~~~~~~~~---~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG   86 (361)
                      .+|++|+++++.+   ++.++++++|.|+|++|||+|||+++|||++|++...|...  ....+|+++|||++|+|+++|
T Consensus        17 ~~p~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~~p~v~G~E~~G~V~~vG   94 (342)
T 4eye_A           17 QGPGSMKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQ--LKMEPPFVPGIETAGVVRSAP   94 (342)
T ss_dssp             -CCCEEEEEEECSSSGGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSS--SCCCSSBCCCSEEEEEEEECC
T ss_pred             cCCcceEEEEEecCCCCceeEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCC--CCCCCCCccceeEEEEEEEEC
Confidence            4677777777764   56799999999999999999999999999999999887542  224679999999999999999


Q ss_pred             CCCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccc-ccchhH
Q 018075           87 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGA-MCEPLS  165 (361)
Q Consensus        87 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa-~~~~~~  165 (361)
                      ++++ |++||||+..                            ...|+|+||++++++.++++|+++++++|| +..++.
T Consensus        95 ~~v~-~~vGDrV~~~----------------------------~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~  145 (342)
T 4eye_A           95 EGSG-IKPGDRVMAF----------------------------NFIGGYAERVAVAPSNILPTPPQLDDAEAVALIANYH  145 (342)
T ss_dssp             TTSS-CCTTCEEEEE----------------------------CSSCCSBSEEEECGGGEEECCTTSCHHHHHHHTTHHH
T ss_pred             CCCC-CCCCCEEEEe----------------------------cCCCcceEEEEEcHHHeEECCCCCCHHHHHHhhhHHH
Confidence            9999 9999999863                            236999999999999999999999999996 556899


Q ss_pred             HHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHH
Q 018075          166 VGVHACR-RANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK  243 (361)
Q Consensus       166 ~a~~~l~-~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~  243 (361)
                      +||+++. .+++++|++|||+|+ |++|++++|+|+..|+ .|+++++++++.++++++|++.++++.   .++.+.+++
T Consensus       146 ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~v~~~~---~~~~~~v~~  221 (342)
T 4eye_A          146 TMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSVGADIVLPLE---EGWAKAVRE  221 (342)
T ss_dssp             HHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEESS---TTHHHHHHH
T ss_pred             HHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEecCc---hhHHHHHHH
Confidence            9999994 589999999999995 9999999999999999 789999999999999999999988754   466666655


Q ss_pred             HHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC-cceechHhhhcCcEEEEeecC----------CCcH
Q 018075          244 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY----------RSTW  312 (361)
Q Consensus       244 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~----------~~~~  312 (361)
                      +.  .+.++|++|||+|++ .++.++++|+++|+++.+|..... ..++...++.+++++.++...          .+.+
T Consensus       222 ~~--~~~g~Dvvid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~  298 (342)
T 4eye_A          222 AT--GGAGVDMVVDPIGGP-AFDDAVRTLASEGRLLVVGFAAGGIPTIKVNRLLLRNASLIGVAWGEFLRTHADYLYETQ  298 (342)
T ss_dssp             HT--TTSCEEEEEESCC---CHHHHHHTEEEEEEEEEC----------CCCCGGGTTCEEEECCHHHHHHHCTTHHHHHH
T ss_pred             Hh--CCCCceEEEECCchh-HHHHHHHhhcCCCEEEEEEccCCCCCccCHHHHhhcCCEEEEEehhhhhhcCHHHHHHHH
Confidence            53  356899999999986 899999999999999999965543 345566678899999998642          2458


Q ss_pred             HHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075          313 PLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  360 (361)
Q Consensus       313 ~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~  360 (361)
                      +.+++++++| +  ++.++++|+|  +++++|++.+.+++..||+|++
T Consensus       299 ~~~~~l~~~g-l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvl~  341 (342)
T 4eye_A          299 AGLEKLVAEG-M--RPPVSARIPL--SEGRQALQDFADGKVYGKMVLV  341 (342)
T ss_dssp             HHHHHHHHTT-C--CCCEEEEEEG--GGHHHHHHHHHTTCCCSEEEEE
T ss_pred             HHHHHHHHcC-C--CCCcceEEeH--HHHHHHHHHHHhCCCCceEEEe
Confidence            8899999999 6  7888999999  9999999999999999999986

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=5.7e-50  Score=365.02  Aligned_cols=307  Identities=18%  Similarity=0.240  Sum_probs=255.3

Q ss_pred             cccceEEEEeeC---CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhccc--ccccccCCCCcccCcceeEEEEEeC
Q 018075           12 KNQNMAAWLLGI---KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTM--RCANFIVKKPMVIGHECAGIIEEVG   86 (361)
Q Consensus        12 ~~~~~~~~~~~~---~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~--~~~~~~~~~p~~~G~e~~G~V~~vG   86 (361)
                      +++|+++++.++   +.++++++|.|+|++|||||||.++|||++|++...|.  ........+|+++|||++|+|+++|
T Consensus         4 m~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~vG   83 (321)
T 3tqh_A            4 MKEMKAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIELG   83 (321)
T ss_dssp             -CEEEEEEESSSCSGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCEEEEEEEEEC
T ss_pred             cccceEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEEcCHHHHHHhcCCccccccccCCCCCcccceeEEEEEEeC
Confidence            346777777754   45999999999999999999999999999999988772  1111235779999999999999999


Q ss_pred             CCCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccc-hhH
Q 018075           87 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLS  165 (361)
Q Consensus        87 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-~~~  165 (361)
                      ++|++|++||||+..+.                        .....|+|+||++++++.++++|+++++++||+++ ++.
T Consensus        84 ~~v~~~~~GdrV~~~~~------------------------~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~  139 (321)
T 3tqh_A           84 SDVNNVNIGDKVMGIAG------------------------FPDHPCCYAEYVCASPDTIIQKLEKLSFLQAASLPTAGL  139 (321)
T ss_dssp             TTCCSCCTTCEEEEECS------------------------TTTCCCCSBSEEEECGGGEEECCTTSCHHHHHHSHHHHH
T ss_pred             CCCCCCCCCCEEEEccC------------------------CCCCCCcceEEEEecHHHhccCCCCCCHHHHhhhhhHHH
Confidence            99999999999987432                        11247999999999999999999999999999775 567


Q ss_pred             HHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccc-hhHHHHH
Q 018075          166 VGVHACRRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIED-VDTDVGK  243 (361)
Q Consensus       166 ~a~~~l~~~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~-~~~~~~~  243 (361)
                      +||++++.+++++|++|||+| +|++|++++|+|+.+|+ +|++++ ++++.++++++|++.++++..  .+ +.+.   
T Consensus       140 ta~~al~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga-~vi~~~-~~~~~~~~~~lGa~~~i~~~~--~~~~~~~---  212 (321)
T 3tqh_A          140 TALQALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTA-SKRNHAFLKALGAEQCINYHE--EDFLLAI---  212 (321)
T ss_dssp             HHHHHHHHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEE-CHHHHHHHHHHTCSEEEETTT--SCHHHHC---
T ss_pred             HHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEe-ccchHHHHHHcCCCEEEeCCC--cchhhhh---
Confidence            899999779999999999997 79999999999999999 677775 566789999999999888643  23 3222   


Q ss_pred             HHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC--CCcHHHHHHHHHc
Q 018075          244 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY--RSTWPLCIEFLRS  321 (361)
Q Consensus       244 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~l~~  321 (361)
                           -.++|+||||+|++ .++.++++|+++|+++.+|......  .......+++++.++...  .++++++++++++
T Consensus       213 -----~~g~D~v~d~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  284 (321)
T 3tqh_A          213 -----STPVDAVIDLVGGD-VGIQSIDCLKETGCIVSVPTITAGR--VIEVAKQKHRRAFGLLKQFNIEELHYLGKLVSE  284 (321)
T ss_dssp             -----CSCEEEEEESSCHH-HHHHHGGGEEEEEEEEECCSTTHHH--HHHHHHHTTCEEECCCCCCCHHHHHHHHHHHHT
T ss_pred             -----ccCCCEEEECCCcH-HHHHHHHhccCCCEEEEeCCCCchh--hhhhhhhcceEEEEEecCCCHHHHHHHHHHHHC
Confidence                 25899999999977 5699999999999999997554321  123456788888885433  5679999999999


Q ss_pred             CCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          322 GKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       322 g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      |++  ++.++++|+|  +++++|++.+.+++..||+|+++
T Consensus       285 g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvl~~  320 (321)
T 3tqh_A          285 DKL--RIEISRIFQL--SEAVTAHELLETGHVRGKLVFKV  320 (321)
T ss_dssp             TSS--CCCEEEEECG--GGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             CCc--ccccccEEcH--HHHHHHHHHHHcCCCCceEEEEe
Confidence            999  5678899999  99999999999999999999975

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=2e-49  Score=364.43  Aligned_cols=313  Identities=23%  Similarity=0.291  Sum_probs=260.7

Q ss_pred             ccCCcccceEEEEeeCCc-eEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeC
Q 018075            8 DEGDKNQNMAAWLLGIKT-LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVG   86 (361)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~-l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG   86 (361)
                      |+++|++|+++++.+++. ++++++|.|+|+++||||||.++|||++|++...|.... ....+|+++|||++|+|+++|
T Consensus         1 Ms~~~~~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~~~~P~v~G~E~~G~V~~vG   79 (343)
T 3gaz_A            1 MSLTTPTMIAAVVEEANGPFVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPH-AQQPLPAILGMDLAGTVVAVG   79 (343)
T ss_dssp             -----CEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCCGG-GCCCSSBCCCCEEEEEEEEEC
T ss_pred             CCCCchhheEEEEecCCCceEEEeccCCCCCCCEEEEEEEEEEeCHhhHHHhCCCCCC-CCCCCCcccCcceEEEEEEEC
Confidence            345667788888887754 999999999999999999999999999999988875321 124679999999999999999


Q ss_pred             CCCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccc-hhH
Q 018075           87 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLS  165 (361)
Q Consensus        87 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-~~~  165 (361)
                      ++|++|++||||+....           +            .....|+|+||++++++.++++|+++++++||+++ ++.
T Consensus        80 ~~v~~~~vGdrV~~~~~-----------g------------~~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~  136 (343)
T 3gaz_A           80 PEVDSFRVGDAVFGLTG-----------G------------VGGLQGTHAQFAAVDARLLASKPAALTMRQASVLPLVFI  136 (343)
T ss_dssp             TTCCSCCTTCEEEEECC-----------S------------STTCCCSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHH
T ss_pred             CCCCCCCCCCEEEEEeC-----------C------------CCCCCcceeeEEEecHHHeeeCCCCCCHHHHHHhhhhHH
Confidence            99999999999986311           0            11247999999999999999999999999998775 677


Q ss_pred             HHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHH
Q 018075          166 VGVHAC-RRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK  243 (361)
Q Consensus       166 ~a~~~l-~~~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~  243 (361)
                      +||+++ +.+++++|++|||+| +|++|++++|+|+..|+ +|+++ .++++.++++++|++. ++   ...++.+.+.+
T Consensus       137 ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga-~Vi~~-~~~~~~~~~~~lGa~~-i~---~~~~~~~~~~~  210 (343)
T 3gaz_A          137 TAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGA-RVFAT-ARGSDLEYVRDLGATP-ID---ASREPEDYAAE  210 (343)
T ss_dssp             HHHHHHTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE-ECHHHHHHHHHHTSEE-EE---TTSCHHHHHHH
T ss_pred             HHHHHHHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHHcCCCE-ec---cCCCHHHHHHH
Confidence            899999 568999999999999 69999999999999999 68888 8899999999999988 55   23566666665


Q ss_pred             HHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC------------CCc
Q 018075          244 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY------------RST  311 (361)
Q Consensus       244 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~------------~~~  311 (361)
                      ..  .+.++|++||++|++ .++.++++|+++|+++.+|...   ..+...+..+++++.+++..            .+.
T Consensus       211 ~~--~~~g~D~vid~~g~~-~~~~~~~~l~~~G~iv~~g~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~  284 (343)
T 3gaz_A          211 HT--AGQGFDLVYDTLGGP-VLDASFSAVKRFGHVVSCLGWG---THKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEM  284 (343)
T ss_dssp             HH--TTSCEEEEEESSCTH-HHHHHHHHEEEEEEEEESCCCS---CCCCHHHHHTTCEEEECCTTHHHHHTCSHHHHHHH
T ss_pred             Hh--cCCCceEEEECCCcH-HHHHHHHHHhcCCeEEEEcccC---ccccchhhhcCcEEEEEEeccchhcccchHHHHHH
Confidence            54  467899999999975 8999999999999999998654   34556778899999997653            256


Q ss_pred             HHHHHHHHHcCCCCCCCceE-EEecCChhhHHHHHHHHhcCCC----ceEEEEe
Q 018075          312 WPLCIEFLRSGKIDVKPLIT-HRFGFTQKEIEDAFEISAQGGN----AIKVMFN  360 (361)
Q Consensus       312 ~~~~~~~l~~g~~~~~~~~~-~~~~l~~~~~~~a~~~l~~~~~----~gkvvi~  360 (361)
                      ++++++++++|++  ++.++ ++|+|  +++++|++.+.+++.    .||+|++
T Consensus       285 ~~~~~~l~~~g~l--~~~i~~~~~~l--~~~~~A~~~~~~~~~~Gr~~GK~v~~  334 (343)
T 3gaz_A          285 LREADALVQTGKL--APRLDPRTFSI--AEIGSAYDAVLGRNDVPRQRGKIAIT  334 (343)
T ss_dssp             HHHHHHHHHTTCC--CCCBCSCCEET--TCHHHHHHHHHTCTTCCCCSSBCEEE
T ss_pred             HHHHHHHHHCCCc--ccCccCcEecH--HHHHHHHHHHHcCCCcccccceEEEE
Confidence            8899999999999  56777 68999  999999999998865    6777775

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=3.2e-49  Score=365.60  Aligned_cols=314  Identities=18%  Similarity=0.217  Sum_probs=260.6

Q ss_pred             ccCCcccceEEEEe------eCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEE
Q 018075            8 DEGDKNQNMAAWLL------GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGI   81 (361)
Q Consensus         8 ~~~~~~~~~~~~~~------~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~   81 (361)
                      .+.++++|+++++.      +++.++++++|.|+|+++||+|||.++|||++|++...|....   ...|.++|||++|+
T Consensus        16 ~~~~m~~MkA~~~~~~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~p~v~G~E~~G~   92 (363)
T 4dvj_A           16 ENLYFQSMKAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPD---GTDWKVIGYDAAGI   92 (363)
T ss_dssp             ---CCCEEEEEEBSSCCCTTSTTSSEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCCC-----CCSBCCCCCEEEE
T ss_pred             hhhhhheeEEEEEeccCCCCCCceEEEeecCCCCCCCCEEEEEEEEEEeCHHHHHHHcCCCCC---CCCCCcccceeEEE
Confidence            34455666666664      3577999999999999999999999999999999988875422   46799999999999


Q ss_pred             EEEeCCCCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc
Q 018075           82 IEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC  161 (361)
Q Consensus        82 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~  161 (361)
                      |+++|++|++|++||||+..+.                         ....|+|+||++++++.++++|+++++++||++
T Consensus        93 V~~vG~~v~~~~vGdrV~~~~~-------------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l  147 (363)
T 4dvj_A           93 VSAVGPDVTLFRPGDEVFYAGS-------------------------IIRPGTNAEFHLVDERIVGRKPKTLDWAEAAAL  147 (363)
T ss_dssp             EEEECTTCCSCCTTCEEEECCC-------------------------TTSCCSCBSEEEEEGGGCEECCTTSCHHHHHTS
T ss_pred             EEEeCCCCCCCCCCCEEEEccC-------------------------CCCCccceEEEEeCHHHeeECCCCCCHHHHHhh
Confidence            9999999999999999986321                         224799999999999999999999999999977


Q ss_pred             c-hhHHHHHHHH-hcCCC-----CCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEeCChhHHHHHHHcCCCEEeecCC
Q 018075          162 E-PLSVGVHACR-RANVG-----PETNVMIMG-SGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARNLGADETAKVST  232 (361)
Q Consensus       162 ~-~~~~a~~~l~-~~~~~-----~g~~vlI~G-~g~~G~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~  232 (361)
                      + ++.+||+++. ..+++     +|++|||+| +|++|++++|+||.+ |+ +|+++++++++.++++++|++.++++. 
T Consensus       148 ~~~~~ta~~al~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~-~Vi~~~~~~~~~~~~~~lGad~vi~~~-  225 (363)
T 4dvj_A          148 PLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDL-TVIATASRPETQEWVKSLGAHHVIDHS-  225 (363)
T ss_dssp             HHHHHHHHHHHHTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCS-EEEEECSSHHHHHHHHHTTCSEEECTT-
T ss_pred             hhHHHHHHHHHHHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHcCCCEEEeCC-
Confidence            5 5678999985 48888     899999998 799999999999985 77 799999999999999999999998864 


Q ss_pred             CccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC----
Q 018075          233 DIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY----  308 (361)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~----  308 (361)
                        .++.+.++++   .+.++|+||||+|++..++.++++|+++|+++.+|..   ..++...+..+++++.++..+    
T Consensus       226 --~~~~~~v~~~---~~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~---~~~~~~~~~~k~~~i~~~~~~~~~~  297 (363)
T 4dvj_A          226 --KPLAAEVAAL---GLGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLIDDP---SAFDIMLFKRKAVSIHHELMFTRPM  297 (363)
T ss_dssp             --SCHHHHHHTT---CSCCEEEEEECSCHHHHHHHHHHHSCTTCEEEECSCC---SSCCGGGGTTTTCEEEECCTTHHHH
T ss_pred             --CCHHHHHHHh---cCCCceEEEECCCchhhHHHHHHHhcCCCEEEEECCC---CccchHHHhhccceEEEEEeecccc
Confidence              2455555443   4679999999999877899999999999999999643   245566777888999886543    


Q ss_pred             ---------CCcHHHHHHHHHcCCCCCCCceEEEe-cCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          309 ---------RSTWPLCIEFLRSGKIDVKPLITHRF-GFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       309 ---------~~~~~~~~~~l~~g~~~~~~~~~~~~-~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                               .+.++++++++++|++  ++.+++++ .++++++++|++.+.+++..||+|+++
T Consensus       298 ~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~~~~l~~~~~A~~~~~~~~~~GKvVl~~  358 (363)
T 4dvj_A          298 FGTPDMSEQGRLLNDVSRLVDEGRL--RTTLTNRLSPINAANLKQAHALVESGTARGKVVIEG  358 (363)
T ss_dssp             HTCTTTHHHHHHHHHHHHHHHHTSS--CCCEEEEECSCSHHHHHHHHHHHHHTCCCSEEEEEC
T ss_pred             ccCcchhhHHHHHHHHHHHHHCCCe--eccccceecCCCHHHHHHHHHHHHhCCCceEEEEeC
Confidence                     1357889999999999  66777776 233399999999999999999999874

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=6.4e-49  Score=361.64  Aligned_cols=305  Identities=19%  Similarity=0.240  Sum_probs=260.4

Q ss_pred             cceEEEEee------CCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCC
Q 018075           14 QNMAAWLLG------IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGS   87 (361)
Q Consensus        14 ~~~~~~~~~------~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   87 (361)
                      +|+++++.+      ++.++++++|.|+|+++||+|||.++|||++|++...|.     ....|+++|||++|+|+++|+
T Consensus         2 ~MkA~~~~~~G~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~-----~~~~p~i~G~e~~G~V~~vG~   76 (346)
T 3fbg_A            2 SLKAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMD-----VSKAPRVLGFDAIGVVESVGN   76 (346)
T ss_dssp             CEEEEEBSSCCCGGGCCCCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHTTSC-----CSSSCBCCCCCEEEEEEEECT
T ss_pred             CcEEEEEEeccccCCCceeEeccccCCCCCCCEEEEEEEEEEcCHHHHHHHhCC-----CCCCCcCcCCccEEEEEEeCC
Confidence            566766663      468999999999999999999999999999999988764     247899999999999999999


Q ss_pred             CCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccc-hhHH
Q 018075           88 EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSV  166 (361)
Q Consensus        88 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-~~~~  166 (361)
                      +|++|++||||+....                         ....|+|+||++++++.++++|+++++++||+++ ++.+
T Consensus        77 ~v~~~~~GdrV~~~~~-------------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~t  131 (346)
T 3fbg_A           77 EVTMFNQGDIVYYSGS-------------------------PDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPLTGIT  131 (346)
T ss_dssp             TCCSCCTTCEEEECCC-------------------------TTSCCSSBSEEEEEGGGEEECCSSSCHHHHTTSHHHHHH
T ss_pred             CCCcCCCCCEEEEcCC-------------------------CCCCcceeEEEEEChHHeEECCCCCCHHHhhhcchhHHH
Confidence            9999999999986321                         2347999999999999999999999999999775 5678


Q ss_pred             HHHHHH-hcCCC------CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchh
Q 018075          167 GVHACR-RANVG------PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVD  238 (361)
Q Consensus       167 a~~~l~-~~~~~------~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~  238 (361)
                      ||+++. .++++      +|++|||+| +|++|++++|+|+..|+ +|+++++++++.++++++|++.++++.   .++.
T Consensus       132 a~~~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~---~~~~  207 (346)
T 3fbg_A          132 AYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWTKKMGADIVLNHK---ESLL  207 (346)
T ss_dssp             HHHHHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCSHHHHHHHHHHTCSEEECTT---SCHH
T ss_pred             HHHHHHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEECC---ccHH
Confidence            999985 48888      999999995 79999999999999999 799999999999999999999988764   2555


Q ss_pred             HHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC----------
Q 018075          239 TDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY----------  308 (361)
Q Consensus       239 ~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~----------  308 (361)
                      +.++++   .+.++|++|||+|++..++.++++|+++|+++.++...  ..++...+..+++++.+...+          
T Consensus       208 ~~~~~~---~~~g~Dvv~d~~g~~~~~~~~~~~l~~~G~iv~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (346)
T 3fbg_A          208 NQFKTQ---GIELVDYVFCTFNTDMYYDDMIQLVKPRGHIATIVAFE--NDQDLNALKPKSLSFSHEFMFARPLNQTDDM  282 (346)
T ss_dssp             HHHHHH---TCCCEEEEEESSCHHHHHHHHHHHEEEEEEEEESSCCS--SCBCGGGGTTTTCEEEECCTTHHHHTTCTTT
T ss_pred             HHHHHh---CCCCccEEEECCCchHHHHHHHHHhccCCEEEEECCCC--CCCccccccccceEEEEEEEecccccchhhH
Confidence            555544   46789999999998867899999999999999887433  245556677788999886543          


Q ss_pred             ---CCcHHHHHHHHHcCCCCCCCceEEEe---cCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          309 ---RSTWPLCIEFLRSGKIDVKPLITHRF---GFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       309 ---~~~~~~~~~~l~~g~~~~~~~~~~~~---~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                         .+.++++++++++|++  ++.++++|   +|  +++++|++.+.+++..||+|+++
T Consensus       283 ~~~~~~~~~~~~l~~~g~l--~~~i~~~~~~~~l--~~~~~A~~~~~~g~~~GKvvl~~  337 (346)
T 3fbg_A          283 IKHHEYLEDITNKVEQNIY--QPTTTKVIEGLTT--ENIYQAHQILESNTMIGKLVINL  337 (346)
T ss_dssp             HHHHHHHHHHHHHHHTTSS--CCCEEEEEESCCH--HHHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HHHHHHHHHHHHHHHCCCE--ECCccceecCCCH--HHHHHHHHHHhcCCcceEEEEec
Confidence               1347889999999999  67777777   67  99999999999999999999874

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=1.3e-48  Score=362.67  Aligned_cols=315  Identities=19%  Similarity=0.269  Sum_probs=254.9

Q ss_pred             CcccceEEEEeeCCceEEE-EecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCC
Q 018075           11 DKNQNMAAWLLGIKTLKIQ-PYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEV   89 (361)
Q Consensus        11 ~~~~~~~~~~~~~~~l~~~-~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   89 (361)
                      ||.+|+++++.+++.++++ ++|.|+|+++||||||.++|||++|++.+.+.      ...|+++|||++|+|+++|++|
T Consensus         8 ~p~~mkA~v~~~~~~l~~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~------~~~p~v~G~e~~G~V~~vG~~v   81 (371)
T 3gqv_A            8 PPPQQTALTVNDHDEVTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQF------ATPWAFLGTDYAGTVVAVGSDV   81 (371)
T ss_dssp             CCSCEEEEEECTTSCEEEEEEECCCCCCTTSEEEEEEEEECCGGGGC-----------CCTTSCCCSEEEEEEEEECTTC
T ss_pred             CchhceeEEEcCCCceEEeccCCCCCCCCCEEEEEEEEEEcCHHHHHHhhcC------CCCCccCccccEEEEEEeCCCC
Confidence            5677888888889999999 99999999999999999999999999887652      3569999999999999999999


Q ss_pred             CCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccc-hhHHHH
Q 018075           90 KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGV  168 (361)
Q Consensus        90 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-~~~~a~  168 (361)
                      ++|++||||+..       |..|..+             ....|+|+||++++++.++++|+++++++||+++ .+.+||
T Consensus        82 ~~~~~GdrV~~~-------~~~~~~~-------------~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~ta~  141 (371)
T 3gqv_A           82 THIQVGDRVYGA-------QNEMCPR-------------TPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAG  141 (371)
T ss_dssp             CSCCTTCEEEEE-------CCTTCTT-------------CTTCCSSBSEEECCTTCEEECCTTCCHHHHHTSHHHHHHHH
T ss_pred             CCCCCCCEEEEe-------ccCCCCC-------------CCCCCcCcCeEEEchhheEECCCCCCHHHHhhhhhhHHHHH
Confidence            999999999864       3333322             1357999999999999999999999999999774 567899


Q ss_pred             HHHH-h-cCC-----------CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCc
Q 018075          169 HACR-R-ANV-----------GPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDI  234 (361)
Q Consensus       169 ~~l~-~-~~~-----------~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~  234 (361)
                      +++. . .++           ++|++|||+|+ |++|++++|+|+..|+ +|+++. +++|.++++++|++.++++..  
T Consensus       142 ~~l~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga-~Vi~~~-~~~~~~~~~~lGa~~vi~~~~--  217 (371)
T 3gqv_A          142 LAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGY-IPIATC-SPHNFDLAKSRGAEEVFDYRA--  217 (371)
T ss_dssp             HHHHHHTCCCCCSSCSSCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHHHTTCSEEEETTS--
T ss_pred             HHHHhhccCCCCCccccccccCCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEe-CHHHHHHHHHcCCcEEEECCC--
Confidence            9984 4 342           89999999996 9999999999999999 677775 789999999999999988644  


Q ss_pred             cchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhh-cCCCEEEEEccCCC------Cccee---chHhhhcCcEEEE
Q 018075          235 EDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNAT-RPGGKVCLIGLAKT------EMTVA---LTPAAAREVDVIG  304 (361)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l-~~~G~~v~~g~~~~------~~~~~---~~~~~~~~~~i~~  304 (361)
                      .++.+.++++.   ++++|+|||++|++..++.++++| +++|+++.+|....      .....   ...++.+++++.+
T Consensus       218 ~~~~~~v~~~t---~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~g  294 (371)
T 3gqv_A          218 PNLAQTIRTYT---KNNLRYALDCITNVESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPA  294 (371)
T ss_dssp             TTHHHHHHHHT---TTCCCEEEESSCSHHHHHHHHHHSCTTCEEEEESSCCCC---CCSCEEEEECCGGGGGTSCBSCST
T ss_pred             chHHHHHHHHc---cCCccEEEECCCchHHHHHHHHHhhcCCCEEEEEecCccccccccccceeeeeeeeeccccccccc
Confidence            56666666653   446999999999987899999999 59999999985432      11111   1245667888877


Q ss_pred             eecC----------CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceE-EEEe
Q 018075          305 IFRY----------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIK-VMFN  360 (361)
Q Consensus       305 ~~~~----------~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gk-vvi~  360 (361)
                      ++..          .+.++++++++++|++++.+.+++.|+|  +++++|++.+.+++..|| +|++
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~l--~~~~~A~~~l~~g~~~Gkkvvv~  359 (371)
T 3gqv_A          295 PYGRPGSEEERQFGEDLWRIAGQLVEDGRLVHHPLRVVQGGF--DHIKQGMELVRKGELSGEKLVVR  359 (371)
T ss_dssp             TTCBCCCHHHHHHHHHHHHHHHHHHHTTSSCCCCEEEEEECH--HHHHHHHHHHHTTCCSSCEEEEE
T ss_pred             cccccccHHHHHHHHHHHHHHHHHHHCCeeeCCcCeecCCcH--HHHHHHHHHHHcCCCceEEEEEE
Confidence            6433          1124578899999999888888777888  999999999999988875 4443

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=7e-49  Score=360.64  Aligned_cols=311  Identities=18%  Similarity=0.206  Sum_probs=256.4

Q ss_pred             CcccceEEEEeeCC----ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeC
Q 018075           11 DKNQNMAAWLLGIK----TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVG   86 (361)
Q Consensus        11 ~~~~~~~~~~~~~~----~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG   86 (361)
                      |+++++++++.+++    .++++++|.|+|++|||+|||+++|||++|++.+.|....  ...+|+++|||++|+|+++|
T Consensus         1 M~~~mka~~~~~~g~p~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~i~G~E~~G~V~~vG   78 (340)
T 3gms_A            1 MSLHGKLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAH--RIPLPNIPGYEGVGIVENVG   78 (340)
T ss_dssp             -CCEEEEEEESSCSCHHHHEEEEEEECCCCCTTEEEEEEEEEECCHHHHGGGGTTTTT--TSCSSBCCCSCCEEEEEEEC
T ss_pred             CCcccEEEEEecCCCchheEEEEecCCCCCCCCEEEEEEEEecCCHHHHHHhcCCCCC--CCCCCCcCCcceEEEEEEeC
Confidence            45567777777553    3999999999999999999999999999999988875422  24789999999999999999


Q ss_pred             CCCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhH
Q 018075           87 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLS  165 (361)
Q Consensus        87 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~  165 (361)
                      ++|++|++||||+..                            ...|+|+||++++++.++++|+++++++||++ ....
T Consensus        79 ~~v~~~~vGdrV~~~----------------------------~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~l~~~~~  130 (340)
T 3gms_A           79 AFVSRELIGKRVLPL----------------------------RGEGTWQEYVKTSADFVVPIPDSIDDFTAAQMYINPL  130 (340)
T ss_dssp             TTSCGGGTTCEEEEC----------------------------SSSCSSBSEEEEEGGGEEECCTTSCHHHHTTSSHHHH
T ss_pred             CCCCCCCCCCEEEec----------------------------CCCccceeEEEcCHHHeEECCCCCCHHHHhhhcchHH
Confidence            999999999999852                            23799999999999999999999999999865 4677


Q ss_pred             HHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHH
Q 018075          166 VGVHACR-RANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGK  243 (361)
Q Consensus       166 ~a~~~l~-~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~  243 (361)
                      +||+++. .+++++|++|||+|+ |++|++++|+|+..|+ .|+++++++++.++++++|++.++++..  .++.+.+.+
T Consensus       131 ta~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lga~~~~~~~~--~~~~~~~~~  207 (340)
T 3gms_A          131 TAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRLGAAYVIDTST--APLYETVME  207 (340)
T ss_dssp             HHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEETTT--SCHHHHHHH
T ss_pred             HHHHHHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhCCCcEEEeCCc--ccHHHHHHH
Confidence            8888884 589999999999996 6999999999999999 7999999999999999999999887543  566666665


Q ss_pred             HHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhh-hcCcEEEEeecC-----------CCc
Q 018075          244 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAA-AREVDVIGIFRY-----------RST  311 (361)
Q Consensus       244 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~-~~~~~i~~~~~~-----------~~~  311 (361)
                      +.  .+.++|++|||+|.+ .....+++|+++|+++.+|..... .++...+. ...+++..+...           .+.
T Consensus       208 ~~--~~~g~Dvvid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (340)
T 3gms_A          208 LT--NGIGADAAIDSIGGP-DGNELAFSLRPNGHFLTIGLLSGI-QVNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQET  283 (340)
T ss_dssp             HT--TTSCEEEEEESSCHH-HHHHHHHTEEEEEEEEECCCTTSC-CCCHHHHHHTSCCEEEECCHHHHHHHSCHHHHHHH
T ss_pred             Hh--CCCCCcEEEECCCCh-hHHHHHHHhcCCCEEEEEeecCCC-CCCHHHhhhcccceEEEEEehhhhhhcCHHHHHHH
Confidence            53  356899999999977 667788999999999999976542 22333322 234444443311           457


Q ss_pred             HHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCC-ceEEEEeC
Q 018075          312 WPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGN-AIKVMFNL  361 (361)
Q Consensus       312 ~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~-~gkvvi~~  361 (361)
                      ++++++++++|++++.+ ++++|+|  +++++|++.+.+++. .||+++++
T Consensus       284 ~~~~~~l~~~g~l~~~~-i~~~~~l--~~~~~A~~~~~~~~~~~GKvvl~~  331 (340)
T 3gms_A          284 FRHLIRLVENEQLRFMK-VHSTYEL--ADVKAAVDVVQSAEKTKGKVFLTS  331 (340)
T ss_dssp             HHHHHHHHHTTSSCCCC-EEEEEEG--GGHHHHHHHHHCTTCCSSEEEEEC
T ss_pred             HHHHHHHHHcCCCcccc-ccEEEeH--HHHHHHHHHHHhcCCCCCeEEEEE
Confidence            88999999999996654 7899999  999999999999975 49999874

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=5.2e-49  Score=362.64  Aligned_cols=306  Identities=23%  Similarity=0.322  Sum_probs=251.6

Q ss_pred             ccceEEEEeeCC---ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCC
Q 018075           13 NQNMAAWLLGIK---TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEV   89 (361)
Q Consensus        13 ~~~~~~~~~~~~---~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   89 (361)
                      ++|+++++.+++   .++++++|.|+|+++||+|||.++|||++|++...|...  .....|+++|||++|+|+++|++|
T Consensus         2 m~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~~p~v~G~e~~G~V~~vG~~v   79 (349)
T 4a27_A            2 MEMRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNID--NPPKTPLVPGFECSGIVEALGDSV   79 (349)
T ss_dssp             CCEEEEEECSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHHTCSS--SCCCSSBCCCSEEEEEEEEECTTC
T ss_pred             ceeEEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCcC--CCCCCCccccceeEEEEEEeCCCC
Confidence            567777777654   699999999999999999999999999999999887532  224789999999999999999999


Q ss_pred             CCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccc-hhHHHH
Q 018075           90 KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGV  168 (361)
Q Consensus        90 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-~~~~a~  168 (361)
                      ++|++||||+..+                            ..|+|+||++++++.++++|+++++++||.++ ++.+||
T Consensus        80 ~~~~~GdrV~~~~----------------------------~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~  131 (349)
T 4a27_A           80 KGYEIGDRVMAFV----------------------------NYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFVTAY  131 (349)
T ss_dssp             CSCCTTCEEEEEC----------------------------SSCCSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHH
T ss_pred             CCCCCCCEEEEec----------------------------CCCcceEEEEecHHHeEECCCCCCHHHHHHHHHHHHHHH
Confidence            9999999998631                            36999999999999999999999999999765 789999


Q ss_pred             HHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHh
Q 018075          169 HACRR-ANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN  246 (361)
Q Consensus       169 ~~l~~-~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~  246 (361)
                      +++.+ +++++|++|||+|+ |++|++++|+|+.+|..+|++++ ++++.+.++ +|++.+++ .  ..++.+.++++  
T Consensus       132 ~~l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-~ga~~~~~-~--~~~~~~~~~~~--  204 (349)
T 4a27_A          132 VMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-DSVTHLFD-R--NADYVQEVKRI--  204 (349)
T ss_dssp             HHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-GGSSEEEE-T--TSCHHHHHHHH--
T ss_pred             HHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-cCCcEEEc-C--CccHHHHHHHh--
Confidence            99854 89999999999996 99999999999999765778776 567888888 99999887 2  35666666655  


Q ss_pred             hcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC-----------------cceechHhhhcCcEEEEeecC-
Q 018075          247 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-----------------MTVALTPAAAREVDVIGIFRY-  308 (361)
Q Consensus       247 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----------------~~~~~~~~~~~~~~i~~~~~~-  308 (361)
                       .+.++|+||||+|++ .++.++++|+++|+++.+|.....                 ..++...++.++.++.++... 
T Consensus       205 -~~~g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~g~~~~~  282 (349)
T 4a27_A          205 -SAEGVDIVLDCLCGD-NTGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLN  282 (349)
T ss_dssp             -CTTCEEEEEEECC--------CTTEEEEEEEEEEC-------------------------CHHHHHHHTCEEEEECHHH
T ss_pred             -cCCCceEEEECCCch-hHHHHHHHhhcCCEEEEECCCcccccccccccccccccccccccCHHHHhhcCceEEEEeehh
Confidence             367999999999987 679999999999999999864311                 113344567788899888642 


Q ss_pred             -----------CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          309 -----------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       309 -----------~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                                 .+.++++++++++|++  ++.++++|+|  +++++|++.+.+++..||+|+++
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~l~~~~~~GKvvi~~  342 (349)
T 4a27_A          283 LLFKQGRAGLIRGVVEKLIGLYNQKKI--KPVVDSLWAL--EEVKEAMQRIHDRGNIGKLILDV  342 (349)
T ss_dssp             HHHTSCCHHHHHHHHHHHHHHHHTTSC--CCCEEEEECG--GGHHHHHHHHHTTCCSSEEEEET
T ss_pred             eeccccchHHHHHHHHHHHHHHHCCCc--cccccceECH--HHHHHHHHHHHhCCCCceEEEec
Confidence                       4568899999999999  7788899999  99999999999999999999974

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=1.9e-48  Score=355.57  Aligned_cols=306  Identities=28%  Similarity=0.273  Sum_probs=256.7

Q ss_pred             ceEEEEee---CCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCC
Q 018075           15 NMAAWLLG---IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS   91 (361)
Q Consensus        15 ~~~~~~~~---~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   91 (361)
                      |+++++.+   ++.++++++|.|+|++|||+|||.++|||++|++...|....   ..+|+++|||++|+|+++|++|++
T Consensus         2 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~---~~~p~v~G~e~~G~V~~vG~~v~~   78 (325)
T 3jyn_A            2 AKRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPA---PFLPSGLGAEGAGVVEAVGDEVTR   78 (325)
T ss_dssp             EEEEEBSSCSSGGGCEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCC---SSSSBCCCCCEEEEEEEECTTCCS
T ss_pred             cEEEEEecCCCcceeEEeecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCC---CCCCCCCCceeEEEEEEECCCCCC
Confidence            44555553   356999999999999999999999999999999988875422   367999999999999999999999


Q ss_pred             CCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHH
Q 018075           92 LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHA  170 (361)
Q Consensus        92 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~  170 (361)
                      |++||||+..+                           ...|+|+||++++++.++++|+++++++||.+ ....+||++
T Consensus        79 ~~~GdrV~~~~---------------------------~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~  131 (325)
T 3jyn_A           79 FKVGDRVAYGT---------------------------GPLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGLTVQYL  131 (325)
T ss_dssp             CCTTCEEEESS---------------------------SSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEec---------------------------CCCccccceEEecHHHeEECCCCCCHHHHhhhhhhHHHHHHH
Confidence            99999998631                           23799999999999999999999999999855 467888988


Q ss_pred             HHh-cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhc
Q 018075          171 CRR-ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       171 l~~-~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      +.+ +++++|++|||+| +|++|++++|+|+..|+ +|+++++++++.++++++|++.++++..  .++.+.+.++.  .
T Consensus       132 l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~--~~~~~~~~~~~--~  206 (325)
T 3jyn_A          132 LRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKALGAWETIDYSH--EDVAKRVLELT--D  206 (325)
T ss_dssp             HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEETTT--SCHHHHHHHHT--T
T ss_pred             HHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEeCCC--ccHHHHHHHHh--C
Confidence            865 7899999999999 79999999999999999 7999999999999999999999888643  56666666553  3


Q ss_pred             CCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCc-ceechHhhhc-CcEEEEeec-----CCCc----HHHHHH
Q 018075          249 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM-TVALTPAAAR-EVDVIGIFR-----YRST----WPLCIE  317 (361)
Q Consensus       249 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~-~~~i~~~~~-----~~~~----~~~~~~  317 (361)
                      +.++|++||++|+. .++.++++|+++|+++.+|...... .++...+..+ .+.+.+...     .+++    ++++++
T Consensus       207 ~~g~Dvvid~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (325)
T 3jyn_A          207 GKKCPVVYDGVGQD-TWLTSLDSVAPRGLVVSFGNASGPVSGVNLGILAQKDSVYVTRPTLGSYANNAQNLQTMADELFD  285 (325)
T ss_dssp             TCCEEEEEESSCGG-GHHHHHTTEEEEEEEEECCCTTCCCCSCCTHHHHHTTSCEEECCCHHHHSCSTTHHHHHHHHHHH
T ss_pred             CCCceEEEECCChH-HHHHHHHHhcCCCEEEEEecCCCCCCCCCHHHHhhcCcEEEEeeeeeeecCCHHHHHHHHHHHHH
Confidence            56899999999985 8999999999999999999765442 4555566666 566654321     1333    458899


Q ss_pred             HHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEe
Q 018075          318 FLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFN  360 (361)
Q Consensus       318 ~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~  360 (361)
                      ++++|+++  +.++++|+|  +++++|++.+.+++..||+|+.
T Consensus       286 l~~~g~l~--~~i~~~~~l--~~~~~A~~~~~~~~~~Gkvvl~  324 (325)
T 3jyn_A          286 MLASGKLK--VDGIEQYAL--KDAAKAQIELSARRTTGSTILI  324 (325)
T ss_dssp             HHHTTSSC--CCCCEEEEG--GGHHHHHHHHHTTCCCSCEEEE
T ss_pred             HHHCCCee--CccccEEcH--HHHHHHHHHHHcCCCCceEEEe
Confidence            99999994  446789999  9999999999999999999986

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=9.8e-49  Score=361.93  Aligned_cols=314  Identities=16%  Similarity=0.218  Sum_probs=253.7

Q ss_pred             cCCcccceEEEEeeCCc----eEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEE
Q 018075            9 EGDKNQNMAAWLLGIKT----LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEE   84 (361)
Q Consensus         9 ~~~~~~~~~~~~~~~~~----l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~   84 (361)
                      ..|+.+|+++++.+++.    ++++++|.|+|+++||+|||.++|||++|++...|...  ....+|+++|||++|+|++
T Consensus        21 ~~m~~~mka~~~~~~g~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~--~~~~~P~v~G~E~~G~V~~   98 (357)
T 1zsy_A           21 QSMPARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYG--LLPELPAVGGNEGVAQVVA   98 (357)
T ss_dssp             CCCCCCEEEEEESSSSCHHHHEEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTCSS--CCCCSSEECCSCCEEEEEE
T ss_pred             hhCchhhEEEEEecCCCccceEEEeeccCCCCCCCEEEEEEEECCCCHHHhhHhcCCCC--CCCCCCccccceEEEEEEE
Confidence            35677777777777654    89999999999999999999999999999998887432  1135799999999999999


Q ss_pred             eCCCCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccc-h
Q 018075           85 VGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-P  163 (361)
Q Consensus        85 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-~  163 (361)
                      +|++|++|++||||+..+                           ...|+|+||++++++.++++|+++++++||+++ +
T Consensus        99 vG~~v~~~~vGdrV~~~~---------------------------~~~G~~aey~~v~~~~~~~iP~~l~~~~Aa~l~~~  151 (357)
T 1zsy_A           99 VGSNVTGLKPGDWVIPAN---------------------------AGLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVN  151 (357)
T ss_dssp             ECTTCCSCCTTCEEEESS---------------------------SCSCCSBSEEEEEGGGEEEECSSSCHHHHHHTTSH
T ss_pred             eCCCCCCCCCCCEEEEcC---------------------------CCCccceeEEecCHHHcEECCCCCCHHHHhhhccc
Confidence            999999999999998732                           126999999999999999999999999998775 6


Q ss_pred             hHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCh---hHHHHHHHcCCCEEeecCCCccchh
Q 018075          164 LSVGVHACRR-ANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDV---QRLSIARNLGADETAKVSTDIEDVD  238 (361)
Q Consensus       164 ~~~a~~~l~~-~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~---~~~~~~~~lg~~~~~~~~~~~~~~~  238 (361)
                      +.|||+++.+ +++++|++|||+|+ |++|++++|+||.+|++++++++.++   ++.++++++|++.++++..   ...
T Consensus       152 ~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~---~~~  228 (357)
T 1zsy_A          152 PCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEE---LRR  228 (357)
T ss_dssp             HHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEEEHHH---HHS
T ss_pred             HHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEEecCc---chH
Confidence            7899999865 79999999999995 99999999999999995455554433   3578899999999887532   111


Q ss_pred             HHHHHHHhhcC-CCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCC-CCcceechHhhhcCcEEEEeecC--------
Q 018075          239 TDVGKIQNAMG-SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK-TEMTVALTPAAAREVDVIGIFRY--------  308 (361)
Q Consensus       239 ~~~~~~~~~~~-~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~--------  308 (361)
                      +.+.++.  .+ .++|+||||+|++ ....++++|+++|+++.+|... ....++...+..+++++.+++..        
T Consensus       229 ~~~~~~~--~~~~~~Dvvid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~  305 (357)
T 1zsy_A          229 PEMKNFF--KDMPQPRLALNCVGGK-SSTELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHSP  305 (357)
T ss_dssp             GGGGGTT--SSSCCCSEEEESSCHH-HHHHHHTTSCTTCEEEECCCCTTCCBCCCHHHHHHSCCEEEECCHHHHHHHSCH
T ss_pred             HHHHHHH--hCCCCceEEEECCCcH-HHHHHHHhhCCCCEEEEEecCCCCCCCCCHHHHHhcCceEEEEEcchhcccCCH
Confidence            1222221  12 2699999999976 5677999999999999998543 33345556677899999998642        


Q ss_pred             ---CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          309 ---RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       309 ---~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                         .+.++++++++++|+++  +.+.++|+|  +++++|++.+.+++..||+|+++
T Consensus       306 ~~~~~~~~~~~~l~~~g~l~--~~~~~~~~l--~~~~~A~~~~~~~~~~gKvvl~~  357 (357)
T 1zsy_A          306 DQFKELILTLCDLIRRGQLT--APACSQVPL--QDYQSALEASMKPFISSKQILTM  357 (357)
T ss_dssp             HHHHHHHHHHHHHHHTTSSC--CCCEEEEEG--GGHHHHHHHHTSSSCSSEEEEEC
T ss_pred             HHHHHHHHHHHHHHHcCCCc--CccceEEcH--HHHHHHHHHHHhCCCCCcEEEeC
Confidence               23578899999999994  445688999  99999999999988889999975

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=1.8e-50  Score=367.43  Aligned_cols=298  Identities=19%  Similarity=0.264  Sum_probs=238.4

Q ss_pred             ccceEEEEe-eCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCC
Q 018075           13 NQNMAAWLL-GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS   91 (361)
Q Consensus        13 ~~~~~~~~~-~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   91 (361)
                      ++|+++++. +++.++++++|.|+|+++||+|||.++|||++|++...|...   ...+|+++|||++|+|+++|++|++
T Consensus         3 ~tMka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~~p~i~G~e~~G~V~~vG~~v~~   79 (315)
T 3goh_A            3 EQHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPI---NWSNGHVPGVDGAGVIVKVGAKVDS   79 (315)
T ss_dssp             CEEEEEEEETTTTEEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHHCTT---CCCTTCCCCSEEEEEEEEECTTSCG
T ss_pred             cceEEEEEeCCCCeeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHcCCCC---cCCCCCEeeeeeEEEEEEeCCCCCC
Confidence            456777777 678999999999999999999999999999999999887542   2467999999999999999999999


Q ss_pred             CCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHH
Q 018075           92 LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHA  170 (361)
Q Consensus        92 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~  170 (361)
                      |++||||+..+.                         ....|+|+||++++++.++++|+++++++||.+ .++.|||++
T Consensus        80 ~~vGdrV~~~~~-------------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~a  134 (315)
T 3goh_A           80 KMLGRRVAYHTS-------------------------LKRHGSFAEFTVLNTDRVMTLPDNLSFERAAALPCPLLTAWQA  134 (315)
T ss_dssp             GGTTCEEEEECC-------------------------TTSCCSSBSEEEEETTSEEECCTTSCHHHHHTSHHHHHHHHHH
T ss_pred             CCCCCEEEEeCC-------------------------CCCCcccccEEEEcHHHhccCcCCCCHHHHhhCccHHHHHHHH
Confidence            999999997431                         224799999999999999999999999999844 689999999


Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCC
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (361)
                      ++.+++++|++|||+|+|++|++++|+||.+|+ +|++++ ++++.++++++|++.+++      + .+.   +    +.
T Consensus       135 l~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~lGa~~v~~------d-~~~---v----~~  198 (315)
T 3goh_A          135 FEKIPLTKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKRGVRHLYR------E-PSQ---V----TQ  198 (315)
T ss_dssp             HTTSCCCSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHHTEEEEES------S-GGG---C----CS
T ss_pred             HhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHcCCCEEEc------C-HHH---h----CC
Confidence            966999999999999999999999999999999 789998 899999999999988773      1 111   2    57


Q ss_pred             CccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCccee--chHhhhcCcEEEEeecC---------CCcHHHHHHHH
Q 018075          251 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVA--LTPAAAREVDVIGIFRY---------RSTWPLCIEFL  319 (361)
Q Consensus       251 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~--~~~~~~~~~~i~~~~~~---------~~~~~~~~~~l  319 (361)
                      ++|+||||+|++ .+..++++|+++|+++.+|........+  ...+.++++++.+++.+         .+.++++++++
T Consensus       199 g~Dvv~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  277 (315)
T 3goh_A          199 KYFAIFDAVNSQ-NAAALVPSLKANGHIICIQDRIPAPIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLI  277 (315)
T ss_dssp             CEEEEECC--------TTGGGEEEEEEEEEECCC----------CCSEEEEECGGGHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred             CccEEEECCCch-hHHHHHHHhcCCCEEEEEeCCCCccccchhhhcceeeEEEeecccccCChhHHHHHHHHHHHHHHHH
Confidence            899999999987 6688999999999999997543221111  11122222222222221         12467899999


Q ss_pred             HcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          320 RSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       320 ~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      ++|++  ++.++++|+|  +++++|++.+.  +..||+|+++
T Consensus       278 ~~g~l--~~~i~~~~~l--~~~~~A~~~~~--~~~gKvvi~~  313 (315)
T 3goh_A          278 AQGKM--EIAAPDIFRF--EQMIEALDHSE--QTKLKTVLTL  313 (315)
T ss_dssp             HTTSS--CCCCCEEEEG--GGHHHHHHHHH--HHCCCEEEES
T ss_pred             HCCCc--ccccceEecH--HHHHHHHHHHH--hcCCcEEEEe
Confidence            99999  6778899999  99999999998  5778999875

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1e-47  Score=353.96  Aligned_cols=310  Identities=22%  Similarity=0.324  Sum_probs=257.1

Q ss_pred             cccceEEEEee---CCceEE-EEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCC
Q 018075           12 KNQNMAAWLLG---IKTLKI-QPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGS   87 (361)
Q Consensus        12 ~~~~~~~~~~~---~~~l~~-~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   87 (361)
                      +.+|+++++.+   ++.+++ +++|.|+|+++||+|||.++|||++|++...|...  ....+|+++|||++|+|+++|+
T Consensus        27 ~~~Mka~~~~~~g~~~~l~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~--~~~~~P~v~G~E~~G~V~~vG~  104 (351)
T 1yb5_A           27 QKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYS--RKPLLPYTPGSDVAGVIEAVGD  104 (351)
T ss_dssp             -CEEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSS--CCCCSSBCCCSCEEEEEEEECT
T ss_pred             cceEEEEEEccCCCcceeEEeeecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCC--CCCCCCCcCCceeEEEEEEECC
Confidence            34556666653   346999 89999999999999999999999999998877432  1235799999999999999999


Q ss_pred             CCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHH
Q 018075           88 EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSV  166 (361)
Q Consensus        88 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~  166 (361)
                      +|++|++||||+..+                           ...|+|+||++++++.++++|+++++++||.+ .++.|
T Consensus       105 ~v~~~~vGdrV~~~~---------------------------~~~G~~aey~~v~~~~~~~~P~~l~~~~aA~l~~~~~t  157 (351)
T 1yb5_A          105 NASAFKKGDRVFTSS---------------------------TISGGYAEYALAADHTVYKLPEKLDFKQGAAIGIPYFT  157 (351)
T ss_dssp             TCTTCCTTCEEEESC---------------------------CSSCSSBSEEEEEGGGEEECCTTSCHHHHTTTHHHHHH
T ss_pred             CCCCCCCCCEEEEeC---------------------------CCCCcceeEEEECHHHeEECCCCCCHHHHHhhhhHHHH
Confidence            999999999998631                           13699999999999999999999999999866 48999


Q ss_pred             HHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHH
Q 018075          167 GVHACR-RANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI  244 (361)
Q Consensus       167 a~~~l~-~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~  244 (361)
                      ||+++. .+++++|++|||+|+ |++|++++|+++..|+ .|+++++++++.+.++++|++.++++..  .++.+.+.+.
T Consensus       158 a~~al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~d~~~--~~~~~~~~~~  234 (351)
T 1yb5_A          158 AYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFNHRE--VNYIDKIKKY  234 (351)
T ss_dssp             HHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTS--TTHHHHHHHH
T ss_pred             HHHHHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHcCCCEEEeCCC--chHHHHHHHH
Confidence            999997 589999999999995 9999999999999999 7899999999999999999998887643  4555555544


Q ss_pred             HhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC---CCc----HHHHHH
Q 018075          245 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY---RST----WPLCIE  317 (361)
Q Consensus       245 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~----~~~~~~  317 (361)
                      .  .+.++|++||++|.+ .++.++++|+++|+++.+|... ...++...++.++.++.++...   .++    ++.+.+
T Consensus       235 ~--~~~~~D~vi~~~G~~-~~~~~~~~l~~~G~iv~~g~~~-~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~  310 (351)
T 1yb5_A          235 V--GEKGIDIIIEMLANV-NLSKDLSLLSHGGRVIVVGSRG-TIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQA  310 (351)
T ss_dssp             H--CTTCEEEEEESCHHH-HHHHHHHHEEEEEEEEECCCCS-CEEECTHHHHTTTCEEEECCGGGCCHHHHHHHHHHHHH
T ss_pred             c--CCCCcEEEEECCChH-HHHHHHHhccCCCEEEEEecCC-CCccCHHHHHhCCcEEEEEEeecCCHHHHHHHHHHHHH
Confidence            3  356899999999976 8899999999999999999643 3345566678899999998532   223    345666


Q ss_pred             HHHcCCCCCCCceEEEecCChhhHHHHHHH-HhcCCCceEEEEeC
Q 018075          318 FLRSGKIDVKPLITHRFGFTQKEIEDAFEI-SAQGGNAIKVMFNL  361 (361)
Q Consensus       318 ~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~-l~~~~~~gkvvi~~  361 (361)
                      ++++|++  ++.++++|+|  +++++|++. ++++...||+|+++
T Consensus       311 ~~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~~gKvvi~~  351 (351)
T 1yb5_A          311 GMEIGWL--KPVIGSQYPL--EKVAEAHENIIHGSGATGKMILLL  351 (351)
T ss_dssp             HHHHTCC--CCCEEEEEEG--GGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             HHHCCCc--cCccceEEcH--HHHHHHHHHHHHhCCCCeEEEEeC
Confidence            8888988  7788899999  999999998 66667789999874

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=100.00  E-value=1.7e-49  Score=365.99  Aligned_cols=312  Identities=18%  Similarity=0.165  Sum_probs=259.1

Q ss_pred             CcccceEEEEe------eCCceEEEEe---------cCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccC
Q 018075           11 DKNQNMAAWLL------GIKTLKIQPY---------HLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIG   75 (361)
Q Consensus        11 ~~~~~~~~~~~------~~~~l~~~~~---------~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G   75 (361)
                      +|.+|+++++.      +++.++++++         |.|+|++|||||||+++|||++|++.+.|...  ....+|+++|
T Consensus         7 ~p~~mka~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~--~~~~~p~v~G   84 (349)
T 3pi7_A            7 IPSEMKALLLVGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYG--QPRVKGRPAG   84 (349)
T ss_dssp             CCSEEEEEEECSCBSCSSCCCSCCCCSTTTEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSS--SCBCTTSBCC
T ss_pred             CchhheEEEEEccccCCCcccceEEEeecccccccCCCCCCCCCeEEEEEEEecCCHHHHHHhcccCC--CCCCCCCCcc
Confidence            56778888887      4678899888         99999999999999999999999999887542  2246899999


Q ss_pred             cceeEEEEEeCCCC-CCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCC
Q 018075           76 HECAGIIEEVGSEV-KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVS  154 (361)
Q Consensus        76 ~e~~G~V~~vG~~v-~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~  154 (361)
                      ||++|+|+++|++| ++|++||||++...                         ....|+|+||++++++.++++|++++
T Consensus        85 ~E~~G~V~~vG~~v~~~~~vGdrV~~~~g-------------------------~~~~G~~aey~~v~~~~~~~iP~~~~  139 (349)
T 3pi7_A           85 FEGVGTIVAGGDEPYAKSLVGKRVAFATG-------------------------LSNWGSWAEYAVAEAAACIPLLDTVR  139 (349)
T ss_dssp             SEEEEEEEEECSSHHHHHHTTCEEEEECT-------------------------TSSCCSSBSEEEEEGGGEEECCTTCC
T ss_pred             ceEEEEEEEECCCccCCCCCCCEEEEecc-------------------------CCCCccceeeEeechHHeEECCCCCC
Confidence            99999999999999 99999999997421                         23479999999999999999999999


Q ss_pred             ccccccc-chhHHHHHHHHhcCCCCC-CEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecC
Q 018075          155 LEEGAMC-EPLSVGVHACRRANVGPE-TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS  231 (361)
Q Consensus       155 ~~~aa~~-~~~~~a~~~l~~~~~~~g-~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  231 (361)
                      +++||.+ ....+||+++++++ ++| ++|||+| +|++|++++|+|+..|+ +|+++++++++.++++++|++.++++.
T Consensus       140 ~~~aa~l~~~~~ta~~~~~~~~-~~g~~~vli~gg~g~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~~~  217 (349)
T 3pi7_A          140 DEDGAAMIVNPLTAIAMFDIVK-QEGEKAFVMTAGASQLCKLIIGLAKEEGF-RPIVTVRRDEQIALLKDIGAAHVLNEK  217 (349)
T ss_dssp             C--GGGSSHHHHHHHHHHHHHH-HHCCSEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHHTCSEEEETT
T ss_pred             HHHHhhccccHHHHHHHHHHHh-hCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEECC
Confidence            9999855 46677897777766 777 6888885 79999999999999999 799999999999999999999988864


Q ss_pred             CCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCC-CCcceec-hHhhhcCcEEEEeecC-
Q 018075          232 TDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK-TEMTVAL-TPAAAREVDVIGIFRY-  308 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~-~~~~~~~~~i~~~~~~-  308 (361)
                      .  .++.+.++++..  +.++|++|||+|++ .++.++++|+++|+++.+|... ....++. ..++.+++++.+++.. 
T Consensus       218 ~--~~~~~~v~~~~~--~~g~D~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~  292 (349)
T 3pi7_A          218 A--PDFEATLREVMK--AEQPRIFLDAVTGP-LASAIFNAMPKRARWIIYGRLDPDATVIREPGQLIFQHKHIEGFWLSE  292 (349)
T ss_dssp             S--TTHHHHHHHHHH--HHCCCEEEESSCHH-HHHHHHHHSCTTCEEEECCCSCCSCCCCSCTHHHHHSCCEEEECCHHH
T ss_pred             c--HHHHHHHHHHhc--CCCCcEEEECCCCh-hHHHHHhhhcCCCEEEEEeccCCCCCCCCchhhhhccccEEEEEEehh
Confidence            3  567777766542  46899999999976 7799999999999999999544 3345555 6788899999998753 


Q ss_pred             ---------CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          309 ---------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       309 ---------~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                               .+.++++++++++|++  ++.++++|+|  +++++|++.+.+ ...||+|++.
T Consensus       293 ~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~-~~~gKvvl~p  349 (349)
T 3pi7_A          293 WMRQFKERRGPAILEAQKRFSDGRW--STDVTAVVPL--AEAIAWVPAELT-KPNGKVFIRP  349 (349)
T ss_dssp             HHHHTHHHHHHHHHHC-CTTTTSSC--CC-CCEEEEH--HHHHHHHHHHHT-SSSSCEEEEC
T ss_pred             hhhhCcHHHHHHHHHHHHHHHcCCc--ccccceEEcH--HHHHHHHHHHhC-CCCceEEEeC
Confidence                     3567888899999999  6778899999  999999995554 4779999874

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=7.5e-48  Score=355.47  Aligned_cols=315  Identities=19%  Similarity=0.255  Sum_probs=258.6

Q ss_pred             cCCcccceEEEEeeCC---ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEe
Q 018075            9 EGDKNQNMAAWLLGIK---TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEV   85 (361)
Q Consensus         9 ~~~~~~~~~~~~~~~~---~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~v   85 (361)
                      +.++++|+++++.+++   .++++++|.|+|+++||+|||.++|||++|++...|....  ...+|+++|||++|+|+++
T Consensus        17 ~~~~~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~--~~~~p~v~G~E~~G~V~~v   94 (354)
T 2j8z_A           17 NLYFQSMLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDP--PPGASNILGLEASGHVAEL   94 (354)
T ss_dssp             ----CEEEEEEESSCSSGGGEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTSSCC--CTTSCSSSCSEEEEEEEEE
T ss_pred             ccchhheeEEEEccCCCccceEEeecCCCCCCCCeEEEEEEEeecCHHHHHHhCCCCCC--CCCCCcccceeeEEEEEEE
Confidence            4466777777777554   6999999999999999999999999999999988774321  2357899999999999999


Q ss_pred             CCCC-CCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-ch
Q 018075           86 GSEV-KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EP  163 (361)
Q Consensus        86 G~~v-~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~  163 (361)
                      |++| ++|++||||+..                            ...|+|+||++++++.++++|+++++++||.+ .+
T Consensus        95 G~~v~~~~~vGdrV~~~----------------------------~~~G~~aey~~v~~~~~~~iP~~ls~~~aa~l~~~  146 (354)
T 2j8z_A           95 GPGCQGHWKIGDTAMAL----------------------------LPGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIPEA  146 (354)
T ss_dssp             CSCC--CCCTTCEEEEE----------------------------CSSCCSBSEEEEEGGGEEECCTTCCHHHHTTSHHH
T ss_pred             CCCcCCCCCCCCEEEEe----------------------------cCCCcceeEEEeCHHHcEECCCCCCHHHHHhccch
Confidence            9999 999999999863                            12599999999999999999999999999855 58


Q ss_pred             hHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHH
Q 018075          164 LSVGVHACR-RANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDV  241 (361)
Q Consensus       164 ~~~a~~~l~-~~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~  241 (361)
                      +.|||+++. .+++++|++|||+| +|++|++++|+++..|+ .|+++++++++.+.++++|++.++++..  .++.+.+
T Consensus       147 ~~tA~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~  223 (354)
T 2j8z_A          147 WLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAEKLGAAAGFNYKK--EDFSEAT  223 (354)
T ss_dssp             HHHHHHHHTTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTCSEEEETTT--SCHHHHH
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecCC--hHHHHHH
Confidence            999999994 58999999999998 69999999999999999 7899999999999999999998887643  4555555


Q ss_pred             HHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC-cceec-hHhhhcCcEEEEeecCC-C--------
Q 018075          242 GKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVAL-TPAAAREVDVIGIFRYR-S--------  310 (361)
Q Consensus       242 ~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~-~~~~~~~~~i~~~~~~~-~--------  310 (361)
                      .+..  .+.++|++||++|++ .++.++++|+++|+++.+|..... ..++. ..+..+++++.++.... .        
T Consensus       224 ~~~~--~~~~~d~vi~~~G~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~  300 (354)
T 2j8z_A          224 LKFT--KGAGVNLILDCIGGS-YWEKNVNCLALDGRWVLYGLMGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLV  300 (354)
T ss_dssp             HHHT--TTSCEEEEEESSCGG-GHHHHHHHEEEEEEEEECCCTTCSCCCSCHHHHHHHTTCEEEECCSTTCCHHHHHHHH
T ss_pred             HHHh--cCCCceEEEECCCch-HHHHHHHhccCCCEEEEEeccCCCccCCChhHHHHhCCCEEEEEEcccccccccHHHH
Confidence            5443  346899999999987 889999999999999999965532 34555 66778999999986542 1        


Q ss_pred             --cHHHHHHHHHcC-CCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          311 --TWPLCIEFLRSG-KIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       311 --~~~~~~~~l~~g-~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                        .++++++++++| ++..++.++++|+|  +++++|++.+.+++..||+|+++
T Consensus       301 ~~~~~~~~~l~~~g~~~~l~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  352 (354)
T 2j8z_A          301 NAFTEQILPHFSTEGPQRLLPVLDRIYPV--TEIQEAHKYMEANKNIGKIVLEL  352 (354)
T ss_dssp             HHHHHHTGGGGTC---CCCCCCEEEEEEG--GGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             HHHHHHHHHHHHcCCCccccCccceEEcH--HHHHHHHHHHHhCCCCceEEEec
Confidence              123578899999 33337889999999  99999999999988889999874

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=7.4e-48  Score=357.27  Aligned_cols=316  Identities=16%  Similarity=0.182  Sum_probs=254.7

Q ss_pred             ccceEEEEeeCCc----eEEEEecCCCCC--CCcEEEEEeeeecCcchhhhhcccccccccCCCC---------cccCcc
Q 018075           13 NQNMAAWLLGIKT----LKIQPYHLPTLG--PQDVKVRIKALGICGSDVHHFKTMRCANFIVKKP---------MVIGHE   77 (361)
Q Consensus        13 ~~~~~~~~~~~~~----l~~~~~~~p~~~--~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p---------~~~G~e   77 (361)
                      ++|+++++.+++.    ++++++|.|+|.  ++||+|||.++|||++|++...|....  ...+|         +++|||
T Consensus         2 ~~mka~~~~~~g~~~~~l~~~~~~~P~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~P~~~~~~~p~~i~G~E   79 (364)
T 1gu7_A            2 ITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPS--KPAKTTGFGTTEPAAPCGNE   79 (364)
T ss_dssp             EEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSC--CCCCBSTTCCSSCBEECCSC
T ss_pred             ceEEEEEeccCCCchheeEEeeccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCC--CCCCCccccccCcccccCce
Confidence            4566767766653    999999988876  999999999999999999998874321  12345         899999


Q ss_pred             eeEEEEEeCCCCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCC------
Q 018075           78 CAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPD------  151 (361)
Q Consensus        78 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~------  151 (361)
                      ++|+|+++|++|++|++||||+..+                           ...|+|+||++++++.++++|+      
T Consensus        80 ~~G~V~~vG~~v~~~~vGdrV~~~~---------------------------~~~G~~aey~~v~~~~~~~~P~~~~~~~  132 (364)
T 1gu7_A           80 GLFEVIKVGSNVSSLEAGDWVIPSH---------------------------VNFGTWRTHALGNDDDFIKLPNPAQSKA  132 (364)
T ss_dssp             CEEEEEEECTTCCSCCTTCEEEESS---------------------------SCCCCSBSEEEEEGGGEEEECCHHHHHH
T ss_pred             eEEEEEEeCCCCCcCCCCCEEEecC---------------------------CCCCcchheEecCHHHeEEcCCcccccc
Confidence            9999999999999999999998632                           1369999999999999999998      


Q ss_pred             -----CCCcccccccc-hhHHHHHHHHh-cCCCCC-CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhH----HHH
Q 018075          152 -----NVSLEEGAMCE-PLSVGVHACRR-ANVGPE-TNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQR----LSI  218 (361)
Q Consensus       152 -----~~~~~~aa~~~-~~~~a~~~l~~-~~~~~g-~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~----~~~  218 (361)
                           ++++++||+++ ++.|||+++++ +++++| ++|||+|+ |++|++++|+||.+|+ .++++.++.++    .++
T Consensus       133 ~~~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~  211 (364)
T 1gu7_A          133 NGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNF-NSISVIRDRPNLDEVVAS  211 (364)
T ss_dssp             TTCSCCCCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTC-EEEEEECCCTTHHHHHHH
T ss_pred             ccccCCCCHHHHhhccccHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCC-EEEEEecCccccHHHHHH
Confidence                 89999998775 78899999987 689999 99999995 9999999999999999 56666554443    677


Q ss_pred             HHHcCCCEEeecCCC-ccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC-CcceechHhh
Q 018075          219 ARNLGADETAKVSTD-IEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAA  296 (361)
Q Consensus       219 ~~~lg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~  296 (361)
                      ++++|++.++++... ..++.+.++++....+.++|+||||+|++ ....++++|+++|+++.+|.... ...++...++
T Consensus       212 ~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~~g~Dvvid~~G~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~  290 (364)
T 1gu7_A          212 LKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGK-SSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYI  290 (364)
T ss_dssp             HHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHH-HHHHHHHTSCTTCEEEECCCCSSCCEEECHHHHH
T ss_pred             HHhcCCeEEEecCccchHHHHHHHHHHhhccCCCceEEEECCCch-hHHHHHHHhccCCEEEEecCCCCCCcccCHHHHh
Confidence            899999998876421 13555555554311356899999999977 55588999999999999996543 3445566678


Q ss_pred             hcCcEEEEeecC----------CCcHHHHHHHHHcCCCCCCCceEEEecC-ChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          297 AREVDVIGIFRY----------RSTWPLCIEFLRSGKIDVKPLITHRFGF-TQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       297 ~~~~~i~~~~~~----------~~~~~~~~~~l~~g~~~~~~~~~~~~~l-~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      .+++++.+++..          .+.++++++++++|++++.+.  ..++| +++++++|++.+.++...||+|+++
T Consensus       291 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~--~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  364 (364)
T 1gu7_A          291 FKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKS--IETLYDGTKPLHELYQDGVANSKDGKQLITY  364 (364)
T ss_dssp             HSCCEEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTCCCCCCC--EEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             hcCcEEEEEchhHhcccCHHHHHHHHHHHHHHHHcCCcccccc--eEEecCchhhHHHHHHHHHhCCCCceEEEeC
Confidence            899999997643          256889999999999966554  44555 2379999999999888889999975

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=5.4e-47  Score=347.17  Aligned_cols=310  Identities=24%  Similarity=0.327  Sum_probs=255.2

Q ss_pred             ceEEEEee---CCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCC
Q 018075           15 NMAAWLLG---IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS   91 (361)
Q Consensus        15 ~~~~~~~~---~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   91 (361)
                      |+++++.+   ++.++++++|.|+|+++||+|||.++|||++|++...|.........+|+++|||++|+|+++|++|++
T Consensus         2 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~   81 (333)
T 1wly_A            2 VMAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTD   81 (333)
T ss_dssp             CEEEEESSCSSGGGEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHC----------CCEECCCEEEEEEEEECTTCCS
T ss_pred             cEEEEEcccCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEEEEEEECCCCCC
Confidence            45555554   346999999999999999999999999999999988764311100357999999999999999999999


Q ss_pred             CCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccc--cccc-chhHHHH
Q 018075           92 LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEE--GAMC-EPLSVGV  168 (361)
Q Consensus        92 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~--aa~~-~~~~~a~  168 (361)
                      |++||||+..+                           ...|+|+||++++++.++++|+++++++  ||.+ .++.|||
T Consensus        82 ~~~GdrV~~~~---------------------------~~~G~~aey~~v~~~~~~~iP~~~~~~~~~aa~l~~~~~ta~  134 (333)
T 1wly_A           82 FTVGERVCTCL---------------------------PPLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGMTAQ  134 (333)
T ss_dssp             CCTTCEEEECS---------------------------SSCCCSBSEEEEEGGGCEECCTTCCCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEec---------------------------CCCCcceeEEEecHHHcEeCCCCCChHHhCccchhhhHHHHH
Confidence            99999997521                           0269999999999999999999999999  6644 5899999


Q ss_pred             HHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHh
Q 018075          169 HACR-RANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN  246 (361)
Q Consensus       169 ~~l~-~~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~  246 (361)
                      +++. .+++++|++|||+| +|++|++++|+++..|+ .|+++++++++.+.++++|++.++++..  .++.+.+.+.. 
T Consensus       135 ~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~g~~~~~d~~~--~~~~~~i~~~~-  210 (333)
T 1wly_A          135 YLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKAETARKLGCHHTINYST--QDFAEVVREIT-  210 (333)
T ss_dssp             HHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEETTT--SCHHHHHHHHH-
T ss_pred             HHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEECCC--HHHHHHHHHHh-
Confidence            9997 58999999999999 59999999999999999 7999999999999999999998877643  45555555443 


Q ss_pred             hcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC-Ccceech-HhhhcC--cEEEEeecC--------CCcHHH
Q 018075          247 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALT-PAAARE--VDVIGIFRY--------RSTWPL  314 (361)
Q Consensus       247 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~-~~~~~~--~~i~~~~~~--------~~~~~~  314 (361)
                       .+.++|++||++|+. .++.++++|+++|+++.+|.... ...++.. .++.++  +++.|++..        .+.+++
T Consensus       211 -~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~  288 (333)
T 1wly_A          211 -GGKGVDVVYDSIGKD-TLQKSLDCLRPRGMCAAYGHASGVADPIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEGSKC  288 (333)
T ss_dssp             -TTCCEEEEEECSCTT-THHHHHHTEEEEEEEEECCCTTCCCCCCCHHHHTTTTTSCEEECCCGGGGSCSHHHHHHHHHH
T ss_pred             -CCCCCeEEEECCcHH-HHHHHHHhhccCCEEEEEecCCCCcCCCChhHhhhhcCCcEEEEEeehhhccCHHHHHHHHHH
Confidence             356899999999984 89999999999999999997653 2344555 566778  888876431        235889


Q ss_pred             HHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          315 CIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       315 ~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      +++++++|++  ++.++++|+|  +++++|++.+.+++..||+|+++
T Consensus       289 ~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  331 (333)
T 1wly_A          289 LFDAVKAGVL--HSSVAKTFPL--REAAAAHKYMGGRQTIGSIVLLP  331 (333)
T ss_dssp             HHHHHHTTSC--CCCEEEEEEG--GGHHHHHHHHHHCSCCSEEEEET
T ss_pred             HHHHHHCCCc--CCCcceEEeH--HHHHHHHHHHHcCCCceEEEEEe
Confidence            9999999999  6778899999  99999999999988889999874

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=100.00  E-value=8.9e-48  Score=351.22  Aligned_cols=306  Identities=16%  Similarity=0.169  Sum_probs=254.4

Q ss_pred             ceEEEEeeCC---ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCC
Q 018075           15 NMAAWLLGIK---TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS   91 (361)
Q Consensus        15 ~~~~~~~~~~---~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   91 (361)
                      |+++++.+++   .++++++|.|+|+++||||||+++|||++|++...|...  ....+|+++|||++|+|+++|  +++
T Consensus         1 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~~p~v~G~E~~G~V~~~G--v~~   76 (324)
T 3nx4_A            1 MQALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGK--IIRHFPMIPGIDFAGTVHASE--DPR   76 (324)
T ss_dssp             CEEEEEEESSSSEEEEEEECCGGGSCCCSEEEEEEEEEECHHHHHHHHTCTT--CCCSSSBCCCSEEEEEEEEES--STT
T ss_pred             CceEEEecCCCCceeeEeecCCCCCCCCEEEEEEEEEeCCHHHHhhhcCCCC--CCCCCCccccceeEEEEEEeC--CCC
Confidence            4677777654   489999999999999999999999999999999887542  224779999999999999998  678


Q ss_pred             CCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccc-hhHHHHHH
Q 018075           92 LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHA  170 (361)
Q Consensus        92 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-~~~~a~~~  170 (361)
                      |++||||++.+.         .            + +....|+|+||++++++.++++|+++++++||+++ .+.|||++
T Consensus        77 ~~vGdrV~~~~~---------~------------~-g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~a  134 (324)
T 3nx4_A           77 FHAGQEVLLTGW---------G------------V-GENHWGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGFTAMLC  134 (324)
T ss_dssp             CCTTCEEEEECT---------T------------B-TTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEccc---------c------------c-CCCCCCceeeEEecCHHHcEECCCCCCHHHHHHhhhHHHHHHHH
Confidence            999999997421         0            0 12347999999999999999999999999999775 66788877


Q ss_pred             HH---hcCCCCCC-EEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHH
Q 018075          171 CR---RANVGPET-NVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       171 l~---~~~~~~g~-~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~  245 (361)
                      ++   +.++++++ +|||+|+ |++|++++|+||.+|+ +|+++++++++.++++++|++.++++...  +.   ++++ 
T Consensus       135 l~~~~~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~vi~~~~~--~~---~~~~-  207 (324)
T 3nx4_A          135 VMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGY-QVAAVSGRESTHGYLKSLGANRILSRDEF--AE---SRPL-  207 (324)
T ss_dssp             HHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTCSEEEEGGGS--SC---CCSS-
T ss_pred             HHHhhhcccCCCCCeEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEEEecCCH--HH---HHhh-
Confidence            63   46677743 4999995 9999999999999999 68999999999999999999999886432  11   2222 


Q ss_pred             hhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC-cceechHhhhcCcEEEEeecC-------CCcHHHHHH
Q 018075          246 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY-------RSTWPLCIE  317 (361)
Q Consensus       246 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-------~~~~~~~~~  317 (361)
                        .+.++|++||++|++ .++.++++|+++|+++.+|..... .+++...++.+++++.+++..       .+.++.+++
T Consensus       208 --~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~  284 (324)
T 3nx4_A          208 --EKQLWAGAIDTVGDK-VLAKVLAQMNYGGCVAACGLAGGFALPTTVMPFILRNVRLQGVDSVMTPPARRAEAWARLVK  284 (324)
T ss_dssp             --CCCCEEEEEESSCHH-HHHHHHHTEEEEEEEEECCCTTCSEEEEESHHHHHHCCEEEECCSTTCCHHHHHHHHHHHHH
T ss_pred             --cCCCccEEEECCCcH-HHHHHHHHHhcCCEEEEEecCCCCCCCCCHHHHhhcCeEEEEEeccccChHHHHHHHHHHHH
Confidence              356899999999976 999999999999999999976553 456667788899999998643       245788899


Q ss_pred             HHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          318 FLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       318 ~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      ++++|++  ++. +++|+|  +++++|++.+.+++..||+|+++
T Consensus       285 l~~~g~l--~~~-~~~~~l--~~~~~A~~~~~~~~~~gkvvv~~  323 (324)
T 3nx4_A          285 DLPESFY--AQA-ATEITL--ADAPKFADAIINNQVQGRTLVKI  323 (324)
T ss_dssp             HSCHHHH--HHH-EEEEEG--GGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HHHcCCC--CCC-ceeEeH--HHHHHHHHHHHhCCCCceEEEec
Confidence            9999998  455 899999  99999999999999999999975

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=2.2e-46  Score=343.69  Aligned_cols=291  Identities=18%  Similarity=0.175  Sum_probs=246.2

Q ss_pred             CCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcc----eeEEEEEeCCCCCCCCCCCEE
Q 018075           23 IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHE----CAGIIEEVGSEVKSLEVGDRV   98 (361)
Q Consensus        23 ~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e----~~G~V~~vG~~v~~~~~Gd~V   98 (361)
                      ++.++++++|.|+|++|||||||+++|||++|++...+..    ....|.++|||    ++|+|++.  ++++|++||||
T Consensus        23 ~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~d~~~~~~~~----~~~~p~~~G~e~g~~~~G~V~~~--~v~~~~vGdrV   96 (336)
T 4b7c_A           23 RDTFSFVETPLGEPAEGQILVKNEYLSLDPAMRGWMNDAR----SYIPPVGIGEVMRALGVGKVLVS--KHPGFQAGDYV   96 (336)
T ss_dssp             TTSEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHHSCSC----CSSCCCCTTSBCCCEEEEEEEEE--CSTTCCTTCEE
T ss_pred             CCceEEEeccCCCCCCCEEEEEEEEEEeCHHHHhhhhccc----ccCCCCCCCcccCCceEEEEEec--CCCCCCCCCEE
Confidence            5789999999999999999999999999999998776532    12456666666    89999995  58899999999


Q ss_pred             EecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccc--c-ccchhHHHHHHH-Hhc
Q 018075           99 ALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEG--A-MCEPLSVGVHAC-RRA  174 (361)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~a--a-~~~~~~~a~~~l-~~~  174 (361)
                      +.                               .|+|+||++++++.++++|+++++.++  + +..++.|||+++ +.+
T Consensus        97 ~~-------------------------------~G~~aey~~v~~~~~~~~P~~~~~~~~a~a~l~~~~~tA~~al~~~~  145 (336)
T 4b7c_A           97 NG-------------------------------ALGVQDYFIGEPKGFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVG  145 (336)
T ss_dssp             EE-------------------------------ECCSBSEEEECCTTCEEECTTTSCGGGGGTTTSHHHHHHHHHHHHTT
T ss_pred             ec-------------------------------cCCceEEEEechHHeEEcCCCCCchHHHhhhcccHHHHHHHHHHHhc
Confidence            86                               589999999999999999999977665  4 446899999999 568


Q ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcCCCEEeecCCCccchhHHHHHHHhhcCCCc
Q 018075          175 NVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       175 ~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      ++++|++|||+|+ |++|++++|+++..|+ +|+++++++++.+.+ +++|++.++++..  .++.+.+.++.   ++++
T Consensus       146 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~---~~~~  219 (336)
T 4b7c_A          146 QPKNGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRFLVEELGFDGAIDYKN--EDLAAGLKREC---PKGI  219 (336)
T ss_dssp             CCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCCSEEEETTT--SCHHHHHHHHC---TTCE
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCCEEEECCC--HHHHHHHHHhc---CCCc
Confidence            9999999999995 9999999999999999 799999999999998 8999999887643  56666665543   5689


Q ss_pred             cEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC----C---cceechHhhhcCcEEEEeecC------CCcHHHHHHHH
Q 018075          253 DVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT----E---MTVALTPAAAREVDVIGIFRY------RSTWPLCIEFL  319 (361)
Q Consensus       253 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~----~---~~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~l  319 (361)
                      |++||++|.+ .++.++++|+++|+++.+|....    .   ..++...++.+++++.++..+      ++.++++++++
T Consensus       220 d~vi~~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~  298 (336)
T 4b7c_A          220 DVFFDNVGGE-ILDTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDYAQRFPEGLKEMATWL  298 (336)
T ss_dssp             EEEEESSCHH-HHHHHHTTEEEEEEEEECCCGGGGC------CCTTTTHHHHTTCEEEECCGGGGGGGHHHHHHHHHHHH
T ss_pred             eEEEECCCcc-hHHHHHHHHhhCCEEEEEeecccccCCcccccchhHHHHHhCCcEEEEEEhhhhhhhhHHHHHHHHHHH
Confidence            9999999975 89999999999999999986542    1   234455678899999998765      26788999999


Q ss_pred             HcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          320 RSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       320 ~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      ++|++  ++.+...++|  +++++|++.+.+++..||+|+++
T Consensus       299 ~~g~l--~~~~~~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  336 (336)
T 4b7c_A          299 AEGKL--QSREDIVEGL--ETFPETLLKLFSGENFGKLVLKV  336 (336)
T ss_dssp             HTTSS--CCCEEEEECG--GGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             HCCCc--ccceeeecCH--HHHHHHHHHHHcCCCCceEEEeC
Confidence            99999  4445556788  99999999999999999999985

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=8.8e-47  Score=345.00  Aligned_cols=307  Identities=22%  Similarity=0.238  Sum_probs=255.3

Q ss_pred             ceEEEEee---CCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCC
Q 018075           15 NMAAWLLG---IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS   91 (361)
Q Consensus        15 ~~~~~~~~---~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   91 (361)
                      |+++++.+   ++.++++++|.|+|+++||+|||.++|||++|++...|...   ...+|+++|||++|+|+++|++|++
T Consensus         2 Mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~---~~~~p~v~G~E~~G~V~~vG~~v~~   78 (327)
T 1qor_A            2 ATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYP---PPSLPSGLGTEAAGIVSKVGSGVKH   78 (327)
T ss_dssp             CEEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSC---CSSSSBCCCSCEEEEEEEECTTCCS
T ss_pred             cEEEEEcCCCChhheEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCC---CCCCCCCCCceeEEEEEEECCCCCC
Confidence            45555554   35699999999999999999999999999999998887431   1357999999999999999999999


Q ss_pred             CCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHH
Q 018075           92 LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHA  170 (361)
Q Consensus        92 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~  170 (361)
                      |++||||... .                          ...|+|+||++++++.++++|+++++++||.+ .++.|||++
T Consensus        79 ~~~GdrV~~~-g--------------------------~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~a  131 (327)
T 1qor_A           79 IKAGDRVVYA-Q--------------------------SALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGLTVYYL  131 (327)
T ss_dssp             CCTTCEEEES-C--------------------------CSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEC-C--------------------------CCCceeeeEEEecHHHcEECCCCCCHHHHHHhhhHHHHHHHH
Confidence            9999999431 0                          12599999999999999999999999998754 689999999


Q ss_pred             HH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhc
Q 018075          171 CR-RANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       171 l~-~~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      +. .+++++|++|||+| +|++|++++|+++..|+ .|+++++++++.+.++++|++.++++..  .++.+.+.+..  .
T Consensus       132 l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~--~  206 (327)
T 1qor_A          132 LRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVINYRE--EDLVERLKEIT--G  206 (327)
T ss_dssp             HHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEETTT--SCHHHHHHHHT--T
T ss_pred             HHHhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEECCC--ccHHHHHHHHh--C
Confidence            97 58999999999999 69999999999999999 7899999999999999999998877543  45555554442  3


Q ss_pred             CCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC-cceechHhhhc-CcEEEEeec---------CCCcHHHHHH
Q 018075          249 GSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAR-EVDVIGIFR---------YRSTWPLCIE  317 (361)
Q Consensus       249 ~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~-~~~i~~~~~---------~~~~~~~~~~  317 (361)
                      +.++|++||++| ...++.++++|+++|+++.+|..... ..++...+..+ ++.+.+...         ..+.++++++
T Consensus       207 ~~~~D~vi~~~g-~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (327)
T 1qor_A          207 GKKVRVVYDSVG-RDTWERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFS  285 (327)
T ss_dssp             TCCEEEEEECSC-GGGHHHHHHTEEEEEEEEECCCTTCCCCCBCTHHHHHTTSCEEECCCHHHHCCSHHHHHHHHHHHHH
T ss_pred             CCCceEEEECCc-hHHHHHHHHHhcCCCEEEEEecCCCCCCccCHHHHhhccceEEEccchhhhcCCHHHHHHHHHHHHH
Confidence            458999999999 45899999999999999999976542 34556666677 777775432         1345788999


Q ss_pred             HHHcCCCCCCCceE--EEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          318 FLRSGKIDVKPLIT--HRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       318 ~l~~g~~~~~~~~~--~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      ++++|++  ++.++  ++|+|  +++++|++.+++++..||+|+++
T Consensus       286 l~~~g~l--~~~i~~~~~~~l--~~~~~A~~~~~~~~~~gKvvl~~  327 (327)
T 1qor_A          286 LIASGVI--KVDVAEQQKYPL--KDAQRAHEILESRATQGSSLLIP  327 (327)
T ss_dssp             HHHTTSS--CCCCCGGGEEEG--GGHHHHHHHHHTTCCCBCCEEEC
T ss_pred             HHHCCCc--ccccccCcEEcH--HHHHHHHHHHHhCCCCceEEEeC
Confidence            9999999  55677  78999  99999999999998899999874

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=9.6e-47  Score=348.98  Aligned_cols=309  Identities=21%  Similarity=0.263  Sum_probs=255.3

Q ss_pred             CcccceEEEEeeCC-----ceEE-EEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEE
Q 018075           11 DKNQNMAAWLLGIK-----TLKI-QPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEE   84 (361)
Q Consensus        11 ~~~~~~~~~~~~~~-----~l~~-~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~   84 (361)
                      ++.+|+++++.+++     .+++ +++|.|+|+++||+|||.++|||++|++...|....  ...+|+++|||++|+|++
T Consensus        20 ~~~~MkA~~~~~~g~~~~~~l~~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~--~~~~P~i~G~E~~G~V~~   97 (362)
T 2c0c_A           20 FQSMMQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDP--SVKPPFDIGFEGIGEVVA   97 (362)
T ss_dssp             HCCEEEEEEECSCCSSHHHHEEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHTTTTCT--TCCSCEECCSEEEEEEEE
T ss_pred             chhhceEEEEeecCCCccceeEEEeecCCCCCCCCeEEEEEEEeccCHHHHHHhcCCCCC--CCCCCCCCCceeEEEEEE
Confidence            45667777777653     5899 999999999999999999999999999988774321  236799999999999999


Q ss_pred             eCCCCC-CCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccch
Q 018075           85 VGSEVK-SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEP  163 (361)
Q Consensus        85 vG~~v~-~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~  163 (361)
                      +|++|+ +|++||||+..                             ..|+|+||++++++.++++|++ +++.|++..+
T Consensus        98 vG~~V~~~~~vGdrV~~~-----------------------------~~G~~aey~~v~~~~~~~~P~~-~~~aaal~~~  147 (362)
T 2c0c_A           98 LGLSASARYTVGQAVAYM-----------------------------APGSFAEYTVVPASIATPVPSV-KPEYLTLLVS  147 (362)
T ss_dssp             ECTTGGGTCCTTCEEEEE-----------------------------CSCCSBSEEEEEGGGCEECSSS-CHHHHTTTTH
T ss_pred             ECCCccCCCCCCCEEEEc-----------------------------cCCcceeEEEEcHHHeEECCCC-chHhhcccch
Confidence            999999 99999999863                             2699999999999999999996 4555556668


Q ss_pred             hHHHHHHHHh-cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHH
Q 018075          164 LSVGVHACRR-ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDV  241 (361)
Q Consensus       164 ~~~a~~~l~~-~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~  241 (361)
                      +.+||+++.+ +++++|++|||+| +|++|++++|+|+..|+ +|+++++++++.++++++|++.++++..  .++.+.+
T Consensus       148 ~~ta~~al~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~~~~--~~~~~~~  224 (362)
T 2c0c_A          148 GTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKSLGCDRPINYKT--EPVGTVL  224 (362)
T ss_dssp             HHHHHHHHHHHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTT--SCHHHHH
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHcCCcEEEecCC--hhHHHHH
Confidence            9999999965 7899999999999 69999999999999999 7999999999999999999999887643  4555555


Q ss_pred             HHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCc-----------ceechHhhhcCcEEEEeecC--
Q 018075          242 GKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEM-----------TVALTPAAAREVDVIGIFRY--  308 (361)
Q Consensus       242 ~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-----------~~~~~~~~~~~~~i~~~~~~--  308 (361)
                      ++.   .+.++|++|||+|.. .++.++++|+++|+++.+|......           .+ ...++.++.++.+++..  
T Consensus       225 ~~~---~~~g~D~vid~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~g~~~~~~  299 (362)
T 2c0c_A          225 KQE---YPEGVDVVYESVGGA-MFDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTL-PAKLLKKSASVQGFFLNHY  299 (362)
T ss_dssp             HHH---CTTCEEEEEECSCTH-HHHHHHHHEEEEEEEEECCCGGGTTSSSCCCCCCCTTH-HHHHHHHTCEEEECCGGGC
T ss_pred             HHh---cCCCCCEEEECCCHH-HHHHHHHHHhcCCEEEEEeCCCCcCccccccccccccc-HHHHHhhcceEEEEEhhhh
Confidence            443   356899999999975 8999999999999999998653211           11 24567889999998643  


Q ss_pred             ----CCcHHHHHHHHHcCCCCCCCc------eEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          309 ----RSTWPLCIEFLRSGKIDVKPL------ITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       309 ----~~~~~~~~~~l~~g~~~~~~~------~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                          .+.++++++++++|++++...      +.+.++|  +++++|++.+.+++..||+|+++
T Consensus       300 ~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  360 (362)
T 2c0c_A          300 LSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGL--ESIFRAVNYMYMGKNTGKIVVEL  360 (362)
T ss_dssp             GGGHHHHHHHHHHHHHTTCSCCCEECSTTSTTCSCBST--THHHHHHHHHHTTCCSBEEEEEC
T ss_pred             hhhHHHHHHHHHHHHHCCCeEeeeccccccccccccCH--HHHHHHHHHHHcCCCCceEEEEc
Confidence                346889999999999954322      2345788  99999999999988899999874

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=100.00  E-value=2e-46  Score=348.73  Aligned_cols=317  Identities=21%  Similarity=0.266  Sum_probs=250.5

Q ss_pred             cccCCcccceEEEEeeC---CceEE-EEecCCCC-CCCcEEEEEeeeecCcchhhhhcccccc------------cccCC
Q 018075            7 DDEGDKNQNMAAWLLGI---KTLKI-QPYHLPTL-GPQDVKVRIKALGICGSDVHHFKTMRCA------------NFIVK   69 (361)
Q Consensus         7 ~~~~~~~~~~~~~~~~~---~~l~~-~~~~~p~~-~~~eVlV~v~~~~l~~~D~~~~~g~~~~------------~~~~~   69 (361)
                      .|+.++.+++++++.++   +.+++ +++|.|.+ +++||+|||.++|||++|++...|....            ....+
T Consensus        14 ~~~~~~~~mka~~~~~~g~~~~l~~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~~   93 (375)
T 2vn8_A           14 GTENLYFQSMAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEE   93 (375)
T ss_dssp             ----CCCCEEEEEBSSCCSGGGCEEEEEECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTTT
T ss_pred             cccccCccceeEEeccCCCccceEEeccccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCcccccccccccccccccccc
Confidence            35566667777766654   46899 99999985 9999999999999999999988764210            01123


Q ss_pred             CCcccCcceeEEEEEeCCCCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEEC
Q 018075           70 KPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKL  149 (361)
Q Consensus        70 ~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v  149 (361)
                      +|+++|||++|+|+++|++|++|++||||+..+.                         ....|+|+||++++++.++++
T Consensus        94 ~P~v~G~E~~G~V~~vG~~V~~~~vGDrV~~~~~-------------------------~~~~G~~aey~~v~~~~~~~i  148 (375)
T 2vn8_A           94 FPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVP-------------------------PWKQGTLSEFVVVSGNEVSHK  148 (375)
T ss_dssp             CSBCCCCEEEEEEEEECTTCCSCCTTCEEEEECC-------------------------TTSCCSSBSEEEEEGGGEEEC
T ss_pred             CCcccceeeeEEEEEeCCCCCCCCCCCEEEEecC-------------------------CCCCccceeEEEEcHHHeeeC
Confidence            7999999999999999999999999999987421                         123699999999999999999


Q ss_pred             CCCCCcccccccc-hhHHHHHHHH-hcC----CCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc
Q 018075          150 PDNVSLEEGAMCE-PLSVGVHACR-RAN----VGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL  222 (361)
Q Consensus       150 P~~~~~~~aa~~~-~~~~a~~~l~-~~~----~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l  222 (361)
                      |+++++++||+++ ++.|||+++. .++    +++|++|||+| +|++|++++|+|+..|+ .|++++ ++++.++++++
T Consensus       149 P~~ls~~~Aa~l~~~~~tA~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga-~Vi~~~-~~~~~~~~~~l  226 (375)
T 2vn8_A          149 PKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDA-HVTAVC-SQDASELVRKL  226 (375)
T ss_dssp             CTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHHHT
T ss_pred             CCCCCHHHHhhhHHHHHHHHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEe-ChHHHHHHHHc
Confidence            9999999999776 5789999995 578    99999999999 69999999999999999 677777 67889999999


Q ss_pred             CCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccCCh-HHHHHHHHhhcCCCEEEEEccCCCCc-c---eec-----
Q 018075          223 GADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD-KTMSTALNATRPGGKVCLIGLAKTEM-T---VAL-----  292 (361)
Q Consensus       223 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~~l~~~G~~v~~g~~~~~~-~---~~~-----  292 (361)
                      |++.++++..  .++.+.+.+     ..++|++||++|++ ..++.++++++++|+++.+|...... .   +..     
T Consensus       227 Ga~~v~~~~~--~~~~~~~~~-----~~g~D~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~  299 (375)
T 2vn8_A          227 GADDVIDYKS--GSVEEQLKS-----LKPFDFILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQT  299 (375)
T ss_dssp             TCSEEEETTS--SCHHHHHHT-----SCCBSEEEESSCTTHHHHGGGGBCSSSCCEEEESCCSHHHHHHHHCHHHHHHHH
T ss_pred             CCCEEEECCc--hHHHHHHhh-----cCCCCEEEECCCChhhhhHHHHHhhcCCcEEEEeCCCcccccccccccchhhee
Confidence            9999888643  345444332     25899999999987 45688999999999999998643210 0   000     


Q ss_pred             -hHhhh-------cCcEEEEeecC--CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          293 -TPAAA-------REVDVIGIFRY--RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       293 -~~~~~-------~~~~i~~~~~~--~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                       ..+..       +...+.+....  .+.++++++++++|++  ++.++++|+|  +++++|++.+++++..||+|+++
T Consensus       300 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  374 (375)
T 2vn8_A          300 GVTVGSKALKHFWKGVHYRWAFFMASGPCLDDIAELVDAGKI--RPVIEQTFPF--SKVPEAFLKVERGHARGKTVINV  374 (375)
T ss_dssp             HHHHHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHHHTTSC--CCCEEEEEEG--GGHHHHHHHHHHCCCSSEEEEEC
T ss_pred             ehhhccccccccccCcceEEEEeCCCHHHHHHHHHHHHCCCc--ccCcCeEECH--HHHHHHHHHHHcCCCCCeEEEEe
Confidence             01111       45555443322  3467999999999999  6788899999  99999999999998889999874

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=100.00  E-value=3.6e-47  Score=347.99  Aligned_cols=313  Identities=18%  Similarity=0.245  Sum_probs=251.2

Q ss_pred             CcccceEEEEeeCC---ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCC
Q 018075           11 DKNQNMAAWLLGIK---TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGS   87 (361)
Q Consensus        11 ~~~~~~~~~~~~~~---~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   87 (361)
                      ||++|+++++.+++   .++++++|.|+|+++||+|||+++|||++|++...|...  ....+|+++|||++|+|+++  
T Consensus         1 m~~~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~~p~i~G~E~~G~V~~~--   76 (330)
T 1tt7_A            1 MSTLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGN--IVREYPLILGIDAAGTVVSS--   76 (330)
T ss_dssp             -CCEEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCT--TCSSCSEECCSEEEEEEEEC--
T ss_pred             CCCcceEEEEecCCCCcceeEeecCCCCCCCCEEEEEEEEEecCHHHHhhhcCCCC--CcCCCCccccceEEEEEEEc--
Confidence            56677777777654   799999999999999999999999999999998876431  12357999999999999996  


Q ss_pred             CCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccc-hhHH
Q 018075           88 EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSV  166 (361)
Q Consensus        88 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-~~~~  166 (361)
                      ++++|++||||++.+..                     + +....|+|+||++++++.++++|+++++++||+++ .+.+
T Consensus        77 ~v~~~~vGdrV~~~~~~---------------------~-g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~t  134 (330)
T 1tt7_A           77 NDPRFAEGDEVIATSYE---------------------L-GVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVYGTAGFT  134 (330)
T ss_dssp             SSTTCCTTCEEEEESTT---------------------B-TTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCEEEEcccc---------------------c-CCCCCccceeEEEecHHHeEECCCCCCHHHHhhccchHHH
Confidence            46789999999874210                     0 11246999999999999999999999999999775 4667


Q ss_pred             HHHHH---HhcCCCCCC-EEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHH
Q 018075          167 GVHAC---RRANVGPET-NVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDV  241 (361)
Q Consensus       167 a~~~l---~~~~~~~g~-~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~  241 (361)
                      ||.++   ++.++++|+ +|||+|+ |++|++++|+|+..|+ .|++++++++++++++++|++.++++...  + .+.+
T Consensus       135 a~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lGa~~v~~~~~~--~-~~~~  210 (330)
T 1tt7_A          135 AALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQLGASEVISREDV--Y-DGTL  210 (330)
T ss_dssp             HHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHHTCSEEEEHHHH--C-SSCC
T ss_pred             HHHHHHHHHhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCcEEEECCCc--h-HHHH
Confidence            77665   457899997 9999995 9999999999999999 58888898999999999999998875321  1 1111


Q ss_pred             HHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC-CcceechHhhhcCcEEEEeecC-------CCcHH
Q 018075          242 GKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRY-------RSTWP  313 (361)
Q Consensus       242 ~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-------~~~~~  313 (361)
                      +++   .+.++|++||++|++ .++.++++++++|+++.+|.... ...++...++.+++++.|++..       .+.++
T Consensus       211 ~~~---~~~~~d~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~  286 (330)
T 1tt7_A          211 KAL---SKQQWQGAVDPVGGK-QLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDSVYCPMDVRAAVWE  286 (330)
T ss_dssp             CSS---CCCCEEEEEESCCTH-HHHHHHTTEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEECCSSSCCHHHHHHHHH
T ss_pred             HHh---hcCCccEEEECCcHH-HHHHHHHhhcCCCEEEEEecCCCCccCcchHHHHhcCeEEEEEeccccCHHHHHHHHH
Confidence            111   245899999999985 89999999999999999997654 3345556678899999997432       12355


Q ss_pred             HHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          314 LCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       314 ~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      .+.+++++|++  ++.++++|+|  +++++|++.+.+++..||+|+++
T Consensus       287 ~~~~~~~~g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  330 (330)
T 1tt7_A          287 RMSSDLKPDQL--LTIVDREVSL--EETPGALKDILQNRIQGRVIVKL  330 (330)
T ss_dssp             HTTTTSCCSCS--TTSEEEEECS--TTHHHHHHHTTTTCCSSEEEECC
T ss_pred             HHHHHHhcCCc--ccccceEEcH--HHHHHHHHHHHcCCCCCeEEEeC
Confidence            56667777877  6778899999  99999999999998899999874

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=8e-45  Score=335.91  Aligned_cols=311  Identities=18%  Similarity=0.188  Sum_probs=252.9

Q ss_pred             cCCcccceEEEE-eeC--------CceEEEEecCCCC-CCCcEEEEEeeeecCcchhhhhcccc--cccccCCCCcccCc
Q 018075            9 EGDKNQNMAAWL-LGI--------KTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKTMR--CANFIVKKPMVIGH   76 (361)
Q Consensus         9 ~~~~~~~~~~~~-~~~--------~~l~~~~~~~p~~-~~~eVlV~v~~~~l~~~D~~~~~g~~--~~~~~~~~p~~~G~   76 (361)
                      +.+|++|+++++ ..+        +.++++++|.|+| +++||+|||.++|||++|++.+.+..  ....+..+|.++||
T Consensus         3 ~~~~~~mka~v~~~~~~~~g~p~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~~~~~~p~v~G~   82 (357)
T 2zb4_A            3 AAAAMIVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDG   82 (357)
T ss_dssp             ---CCEEEEEEECCCCCTTSCCCGGGEEEEEEECCSCCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSSCCCCBTSBCEE
T ss_pred             CcccccceEEEEeccCCCCCCCCcCceEEEeecCCCCCCCCeEEEEEEEEecCHHHHhhccccccccccCCCCCCccccc
Confidence            456777888888 343        5699999999999 99999999999999999988765421  01112467899999


Q ss_pred             ceeEEEEEeCCCCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCC---
Q 018075           77 ECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNV---  153 (361)
Q Consensus        77 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~---  153 (361)
                      |++|+|++  ++|++|++||||+..                              .|+|+||++++++.++++|+++   
T Consensus        83 E~~G~V~~--~~v~~~~vGdrV~~~------------------------------~G~~aey~~v~~~~~~~iP~~~~~~  130 (357)
T 2zb4_A           83 GGIGIIEE--SKHTNLTKGDFVTSF------------------------------YWPWQTKVILDGNSLEKVDPQLVDG  130 (357)
T ss_dssp             EEEEEEEE--ECSTTCCTTCEEEEE------------------------------EEESBSEEEEEGGGCEECCGGGGTT
T ss_pred             cEEEEEEe--cCCCCCCCCCEEEec------------------------------CCCcEEEEEEchHHceecCcccccC
Confidence            99999999  889999999999862                              4899999999999999999999   


Q ss_pred             --CcccccccchhHHHHHHH-HhcCCCCC--CEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH-cCCCE
Q 018075          154 --SLEEGAMCEPLSVGVHAC-RRANVGPE--TNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADE  226 (361)
Q Consensus       154 --~~~~aa~~~~~~~a~~~l-~~~~~~~g--~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~  226 (361)
                        +++.|++..++.|||+++ +.+++++|  ++|||+|+ |++|++++|+++..|+..|+++++++++.+.+++ +|++.
T Consensus       131 ~~~~~~a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~  210 (357)
T 2zb4_A          131 HLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDA  210 (357)
T ss_dssp             CGGGGGTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSE
T ss_pred             chhHHHHhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCce
Confidence              666555667899999999 56899999  99999995 9999999999999999668889999999888887 99998


Q ss_pred             EeecCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC-cceec---------hHhh
Q 018075          227 TAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVAL---------TPAA  296 (361)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~---------~~~~  296 (361)
                      ++++..  .++.+.+.+..   +.++|++||++|+ ..++.++++|+++|+++.+|..... ..++.         ..++
T Consensus       211 ~~d~~~--~~~~~~~~~~~---~~~~d~vi~~~G~-~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~  284 (357)
T 2zb4_A          211 AINYKK--DNVAEQLRESC---PAGVDVYFDNVGG-NISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQK  284 (357)
T ss_dssp             EEETTT--SCHHHHHHHHC---TTCEEEEEESCCH-HHHHHHHHTEEEEEEEEECCCGGGTTSCCCSSCCCCHHHHHHHH
T ss_pred             EEecCc--hHHHHHHHHhc---CCCCCEEEECCCH-HHHHHHHHHhccCcEEEEECCccccccCccccccchhhhhhhhh
Confidence            887643  45555555443   3389999999996 4899999999999999999865321 12221         3567


Q ss_pred             hcCcEEEEeecC------CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          297 AREVDVIGIFRY------RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       297 ~~~~~i~~~~~~------~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      .+++++.++...      .+.++++++++++|++++  .+...|+|  +++++|++.+.+++..||+|+++
T Consensus       285 ~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~~~~~~~l--~~~~~A~~~~~~~~~~gKvvi~~  351 (357)
T 2zb4_A          285 ERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKI--KETVINGL--ENMGAAFQSMMTGGNIGKQIVCI  351 (357)
T ss_dssp             HHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTCCCC--CEEEEECG--GGHHHHHHHHHTTCCSBEEEEEC
T ss_pred             cceeEEEEeehhhhhHHHHHHHHHHHHHHHcCCCcC--ccceecCH--HHHHHHHHHHHcCCCCceEEEEE
Confidence            889999997642      356889999999999954  44556888  99999999999998889999874

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.1e-45  Score=337.96  Aligned_cols=308  Identities=19%  Similarity=0.211  Sum_probs=244.2

Q ss_pred             cceEEEEeeCC---ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCC
Q 018075           14 QNMAAWLLGIK---TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVK   90 (361)
Q Consensus        14 ~~~~~~~~~~~---~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   90 (361)
                      +|+++++.+++   .++++++|.|+|+++||+|||.++|||++|++...|...  ....+|+++|||++|+|+++  +++
T Consensus         3 ~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~--~~~~~p~v~G~E~~G~V~~~--~v~   78 (328)
T 1xa0_A            3 AFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGK--IVKTYPFVPGIDLAGVVVSS--QHP   78 (328)
T ss_dssp             EEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGS--SCCSSSBCCCSEEEEEEEEC--CSS
T ss_pred             cceEEEEecCCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHhhcCCCC--CCCCCCcccCcceEEEEEec--CCC
Confidence            46777777665   789999999999999999999999999999998877431  12357999999999999996  578


Q ss_pred             CCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccc-hhHHHHH
Q 018075           91 SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVH  169 (361)
Q Consensus        91 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-~~~~a~~  169 (361)
                      +|++||||+..+..                     + +....|+|+||++++++.++++|+++++++||+++ .+.+||.
T Consensus        79 ~~~vGdrV~~~~~~---------------------~-g~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~~ta~~  136 (328)
T 1xa0_A           79 RFREGDEVIATGYE---------------------I-GVTHFGGYSEYARLHGEWLVPLPKGLTLKEAMAIGTAGFTAAL  136 (328)
T ss_dssp             SCCTTCEEEEESTT---------------------B-TTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEcccc---------------------C-CCCCCccceeEEEechHHeEECCCCCCHHHhhhhhhhHHHHHH
Confidence            89999999874210                     0 11246999999999999999999999999999775 4667776


Q ss_pred             HH---HhcCCCCCC-EEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHH
Q 018075          170 AC---RRANVGPET-NVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI  244 (361)
Q Consensus       170 ~l---~~~~~~~g~-~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~  244 (361)
                      ++   ++.++++|+ +|||+|+ |++|++++|+|+..|+ .|+++++++++.++++++|++.++++...  + .+.++++
T Consensus       137 ~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lGa~~~i~~~~~--~-~~~~~~~  212 (328)
T 1xa0_A          137 SIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLGAKEVLAREDV--M-AERIRPL  212 (328)
T ss_dssp             HHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTTCSEEEECC------------C
T ss_pred             HHHHHhhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCcEEEecCCc--H-HHHHHHh
Confidence            65   457899997 9999995 9999999999999999 58888899999999999999998876431  1 2222322


Q ss_pred             HhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC-CcceechHhhhcCcEEEEeecC-------CCcHHHHH
Q 018075          245 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRY-------RSTWPLCI  316 (361)
Q Consensus       245 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~-------~~~~~~~~  316 (361)
                         .+.++|++||++|++ .++.++++++++|+++.+|.... ...++...++.+++++.++...       .+.++.+.
T Consensus       213 ---~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~  288 (328)
T 1xa0_A          213 ---DKQRWAAAVDPVGGR-TLATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDSVYCPMDLRLRIWERLA  288 (328)
T ss_dssp             ---CSCCEEEEEECSTTT-THHHHHHTEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEECCSSSCCHHHHHHHHHHHH
T ss_pred             ---cCCcccEEEECCcHH-HHHHHHHhhccCCEEEEEeecCCCCCCCchhhhhhcCceEEEEecccCCHHHHHHHHHHHH
Confidence               245899999999986 89999999999999999997653 3345556678899999997432       12345556


Q ss_pred             HHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          317 EFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       317 ~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      +++++| +  ++ ++++|+|  +++++|++.+++++..||+|+++
T Consensus       289 ~~~~~g-l--~~-~~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  327 (328)
T 1xa0_A          289 GDLKPD-L--ER-IAQEISL--AELPQALKRILRGELRGRTVVRL  327 (328)
T ss_dssp             TTTCCC-H--HH-HEEEEEG--GGHHHHHHHHHHTCCCSEEEEEC
T ss_pred             HHHHcC-C--ce-eeeEeCH--HHHHHHHHHHHcCCCCCeEEEEe
Confidence            666666 5  44 3689999  99999999999998899999874

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=100.00  E-value=3.9e-46  Score=346.87  Aligned_cols=308  Identities=17%  Similarity=0.216  Sum_probs=248.1

Q ss_pred             ccceEEEEe--eCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhccccc-------cc------------------
Q 018075           13 NQNMAAWLL--GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRC-------AN------------------   65 (361)
Q Consensus        13 ~~~~~~~~~--~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~-------~~------------------   65 (361)
                      ..+|++++.  ++..++++++|.|+|+++||||||.++|||++|++.+.|...       +.                  
T Consensus         5 ~~~mka~v~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~~~~~~~   84 (379)
T 3iup_A            5 ALQLRSRIKSSGELELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEGAMRSM   84 (379)
T ss_dssp             EEEEEEEECTTSEEEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCHHHHHHH
T ss_pred             hhhHHHHHhcCCCCceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccccCcccccccc
Confidence            445566666  346799999999999999999999999999999998877420       00                  


Q ss_pred             -ccCCCCcccCcceeEEEEEeCCCC-CCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecC
Q 018075           66 -FIVKKPMVIGHECAGIIEEVGSEV-KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPA  143 (361)
Q Consensus        66 -~~~~~p~~~G~e~~G~V~~vG~~v-~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  143 (361)
                       ....+|+++|||++|+|+++|++| ++|++||||+..                             ..|+|+||+++++
T Consensus        85 ~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~~-----------------------------~~G~~aey~~v~~  135 (379)
T 3iup_A           85 AGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAI-----------------------------GGAMYSQYRCIPA  135 (379)
T ss_dssp             GGGTTEEEECCSCEEEEEEEECSSHHHHTTTTCEEEEC-----------------------------CSCCSBSEEEEEG
T ss_pred             ccccCCCccceeeeEEEEEEeCCCcccCCCCCCEEEec-----------------------------CCCcceeEEEeCH
Confidence             013578999999999999999999 889999999863                             2599999999999


Q ss_pred             CceEECCCCCCccccccc-chhHHHHHHHHhcCCCCCCEEEEE--CCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHH
Q 018075          144 KLCYKLPDNVSLEEGAMC-EPLSVGVHACRRANVGPETNVMIM--GSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR  220 (361)
Q Consensus       144 ~~~~~vP~~~~~~~aa~~-~~~~~a~~~l~~~~~~~g~~vlI~--G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~  220 (361)
                      +.++++|+++++++||.+ ....+||++++... ++|++|||+  |+|++|++++|+|+.+|+ +|+++++++++.++++
T Consensus       136 ~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~-~~g~~vlV~gag~G~vG~~a~q~a~~~Ga-~Vi~~~~~~~~~~~~~  213 (379)
T 3iup_A          136 DQCLVLPEGATPADGASSFVNPLTALGMVETMR-LEGHSALVHTAAASNLGQMLNQICLKDGI-KLVNIVRKQEQADLLK  213 (379)
T ss_dssp             GGEEECCTTCCHHHHTTSSHHHHHHHHHHHHHH-HTTCSCEEESSTTSHHHHHHHHHHHHHTC-CEEEEESSHHHHHHHH
T ss_pred             HHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhc-cCCCEEEEECCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHH
Confidence            999999999999999855 46777898887765 899999999  579999999999999999 6888999999999999


Q ss_pred             HcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhc-----CC-----------CEEEEEccC
Q 018075          221 NLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATR-----PG-----------GKVCLIGLA  284 (361)
Q Consensus       221 ~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~-----~~-----------G~~v~~g~~  284 (361)
                      ++|++.++++..  .++.+.++++..  +.++|+||||+|++...+.++++|+     ++           |+++.+|..
T Consensus       214 ~lGa~~~~~~~~--~~~~~~v~~~t~--~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~~~~G~~~~g~iv~~G~~  289 (379)
T 3iup_A          214 AQGAVHVCNAAS--PTFMQDLTEALV--STGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGL  289 (379)
T ss_dssp             HTTCSCEEETTS--TTHHHHHHHHHH--HHCCCEEEESCEEESHHHHHHHHHHHHHHTTCCSCCTTCCCSCEEEEECCCS
T ss_pred             hCCCcEEEeCCC--hHHHHHHHHHhc--CCCceEEEECCCchhhHHHHHHhcchhhhccccceeecccccCceEEEecCC
Confidence            999999988643  567777766643  4689999999998767788888885     55           555555543


Q ss_pred             CCCcceechHhhhcCcEEEEeecC-------C----CcHHHHHHHHHcCCCCCCCceEEEecCChhhH--HHHHHHHhcC
Q 018075          285 KTEMTVALTPAAAREVDVIGIFRY-------R----STWPLCIEFLRSGKIDVKPLITHRFGFTQKEI--EDAFEISAQG  351 (361)
Q Consensus       285 ~~~~~~~~~~~~~~~~~i~~~~~~-------~----~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~--~~a~~~l~~~  351 (361)
                      .. .+.+....+.+++++.+++..       +    +.++.+++++.+ .+  .+.++++|+|  +++  ++|++.+.++
T Consensus       290 ~~-~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l--~~~i~~~~~l--~~~~~~~A~~~l~~~  363 (379)
T 3iup_A          290 DT-SPTEFNRNFGMAWGMGGWLLFPFLQKIGRERANALKQRVVAELKT-TF--ASHYSKEISL--AEVLDLDMIAVYNKR  363 (379)
T ss_dssp             EE-EEEEECCCSCSCEEEEECCHHHHHHHHCHHHHHHHHHHHHHTTTT-TT--CCCCSEEEEH--HHHTCHHHHHHHTTC
T ss_pred             CC-CccccccccccceEEEEEEeeeecccCCHHHHHHHHHHHHHHHhc-cC--CCcceEEecH--HHhhhHHHHHHHhcC
Confidence            32 133344556788899887542       1    234566666666 35  7778899999  999  9999999999


Q ss_pred             CCceEEEEeC
Q 018075          352 GNAIKVMFNL  361 (361)
Q Consensus       352 ~~~gkvvi~~  361 (361)
                      +..||+|++.
T Consensus       364 ~~~gKvVv~~  373 (379)
T 3iup_A          364 ATGEKYLINP  373 (379)
T ss_dssp             CTTCCEEEET
T ss_pred             CCCceEEEeC
Confidence            9999999874

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=100.00  E-value=2.3e-43  Score=318.76  Aligned_cols=289  Identities=24%  Similarity=0.339  Sum_probs=238.0

Q ss_pred             ceEEEEeeCCc-eEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCC
Q 018075           15 NMAAWLLGIKT-LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE   93 (361)
Q Consensus        15 ~~~~~~~~~~~-l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   93 (361)
                      |+++++.+++. ..+++.|.|+|+++||+|||.++|+|++|++...|....  ...+|+++|||++|+|+          
T Consensus         1 Mka~~~~~~g~~~~l~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~--~~~~p~i~G~e~~G~V~----------   68 (302)
T 1iz0_A            1 MKAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLT--RLHPPFIPGMEVVGVVE----------   68 (302)
T ss_dssp             CEEEEECSTTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSS--CCCSSBCCCCEEEEEET----------
T ss_pred             CeEEEEcCCCCchheEECCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCC--CCCCCCcccceEEEEEE----------
Confidence            35566666643 356799999999999999999999999999988874321  13579999999999998          


Q ss_pred             CCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHHH
Q 018075           94 VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACR  172 (361)
Q Consensus        94 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l~  172 (361)
                       ||||+..+                            ..|+|+||++++++.++++|+++++++||.+ .++.|||+++.
T Consensus        69 -GdrV~~~~----------------------------~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~  119 (302)
T 1iz0_A           69 -GRRYAALV----------------------------PQGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAYLALK  119 (302)
T ss_dssp             -TEEEEEEC----------------------------SSCCSBSEEEEEGGGCEECCTTCCHHHHHTSHHHHHHHHHHHH
T ss_pred             -CcEEEEec----------------------------CCcceeeEEEEcHHHcEeCCCCCCHHHHHHhhhHHHHHHHHHH
Confidence             99998631                            3699999999999999999999999998765 58999999997


Q ss_pred             -hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCC
Q 018075          173 -RANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       173 -~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (361)
                       .+ +++|++|||+|+ |++|++++|+|+..|+ .|+++++++++.++++++|++.++++... .++   ...+     .
T Consensus       120 ~~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~~~~~~-~~~---~~~~-----~  188 (302)
T 1iz0_A          120 RAQ-ARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAATYAEV-PER---AKAW-----G  188 (302)
T ss_dssp             HTT-CCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEEGGGH-HHH---HHHT-----T
T ss_pred             Hhc-CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEECCcc-hhH---HHHh-----c
Confidence             47 999999999995 9999999999999999 79999999999999999999988775310 122   2222     5


Q ss_pred             CccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC-cceechHhhhcCcEEEEeec-----CCCcHHHHHH---HHHc
Q 018075          251 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFR-----YRSTWPLCIE---FLRS  321 (361)
Q Consensus       251 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~-----~~~~~~~~~~---~l~~  321 (361)
                      ++|++|| +|+. .++.++++|+++|+++.+|..... ..++...++.++.++.++..     ..+.++++++   ++++
T Consensus       189 ~~d~vid-~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~  266 (302)
T 1iz0_A          189 GLDLVLE-VRGK-EVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPLLREGALVEEALGFLLPRLG  266 (302)
T ss_dssp             SEEEEEE-CSCT-THHHHHTTEEEEEEEEEC-------CCCCTTHHHHTTCEEEECCHHHHTTCHHHHHHHHHHHGGGBT
T ss_pred             CceEEEE-CCHH-HHHHHHHhhccCCEEEEEeCCCCCCCCcCHHHHHhCCCeEEEEeccchhhhHHHHHHHHhhhHHHHc
Confidence            8999999 9985 899999999999999999865542 24556667889999999864     2456888999   9999


Q ss_pred             CCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          322 GKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       322 g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      |++  ++.++++|+|  +++++|++.+.+++..||+|+++
T Consensus       267 g~l--~~~i~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  302 (302)
T 1iz0_A          267 REL--RPVVGPVFPF--AEAEAAFRALLDRGHTGKVVVRL  302 (302)
T ss_dssp             TTB--CCCEEEEEEG--GGHHHHHHHTTCTTCCBEEEEEC
T ss_pred             CCc--ccccceEEcH--HHHHHHHHHHHcCCCCceEEEeC
Confidence            999  6778899999  99999999999988889999874

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=1.9e-42  Score=318.68  Aligned_cols=309  Identities=15%  Similarity=0.135  Sum_probs=247.0

Q ss_pred             CcccceEEEEe-----eCC--ceEEE--EecCCC-CCCCcEEEEEeeeecCcchhhhhcccccccc-cCCCCcccCccee
Q 018075           11 DKNQNMAAWLL-----GIK--TLKIQ--PYHLPT-LGPQDVKVRIKALGICGSDVHHFKTMRCANF-IVKKPMVIGHECA   79 (361)
Q Consensus        11 ~~~~~~~~~~~-----~~~--~l~~~--~~~~p~-~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~-~~~~p~~~G~e~~   79 (361)
                      ||.+|++.+..     +|+  .++++  ++|.|. |++|||||||.++|+|+.|. ...|...... ...+|+++|||++
T Consensus         1 m~~~mka~~m~a~~~~~p~~~~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~-~~~g~~~~~~~~~~~p~v~G~e~~   79 (345)
T 2j3h_A            1 MTATNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMR-IRMGKPDPSTAALAQAYTPGQPIQ   79 (345)
T ss_dssp             CEEEEEEEEECSCBSSSCCGGGEEEEEEEEECCSCSSSSCEEEEECEEECCTTHH-HHHBC---------CCCCTTSBCE
T ss_pred             CCccceEEEEecCCCCCCCccceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHH-hhcccCCCCccccCCCcCCCCeee
Confidence            45555555444     455  69998  888886 89999999999999998885 3334221100 0246899999999


Q ss_pred             EEEEE--eCCCCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCc--eEECCC---C
Q 018075           80 GIIEE--VGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKL--CYKLPD---N  152 (361)
Q Consensus        80 G~V~~--vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~vP~---~  152 (361)
                      |++++  +|+++++|++||||+.                               .|+|+||++++++.  ++++|+   +
T Consensus        80 G~~~~GvV~~~v~~~~vGdrV~~-------------------------------~g~~aey~~v~~~~~~~~~ip~~~~~  128 (345)
T 2j3h_A           80 GYGVSRIIESGHPDYKKGDLLWG-------------------------------IVAWEEYSVITPMTHAHFKIQHTDVP  128 (345)
T ss_dssp             EEEEEEEEEECSTTCCTTCEEEE-------------------------------EEESBSEEEECCCTTTCEEECCCSSC
T ss_pred             cceEEEEEecCCCCCCCCCEEEe-------------------------------ecCceeEEEecccccceeecCCCCCC
Confidence            99999  9999999999999985                               47899999999876  999996   3


Q ss_pred             CCcccccccchhHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHH-HcCCCEEee
Q 018075          153 VSLEEGAMCEPLSVGVHACR-RANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGADETAK  229 (361)
Q Consensus       153 ~~~~~aa~~~~~~~a~~~l~-~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~~~~  229 (361)
                      ++++.|++..++.|||+++. .+++++|++|||+|+ |++|++++|+++..|+ .|+++++++++.+.++ ++|++.+++
T Consensus       129 ~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~~g~~~~~d  207 (345)
T 2j3h_A          129 LSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGC-YVVGSAGSKEKVDLLKTKFGFDDAFN  207 (345)
T ss_dssp             TTGGGTTTSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTSCCSEEEE
T ss_pred             HHHHHHhccccHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCceEEe
Confidence            56665545568999999995 489999999999995 9999999999999999 7999999999999998 799998887


Q ss_pred             cCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC------CcceechHhhhcCcEEE
Q 018075          230 VSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT------EMTVALTPAAAREVDVI  303 (361)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~i~  303 (361)
                      +.. ..++.+.++++.   +.++|++||++|.. .++.++++|+++|+++.+|....      ...++...++.+++++.
T Consensus       208 ~~~-~~~~~~~~~~~~---~~~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~  282 (345)
T 2j3h_A          208 YKE-ESDLTAALKRCF---PNGIDIYFENVGGK-MLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQ  282 (345)
T ss_dssp             TTS-CSCSHHHHHHHC---TTCEEEEEESSCHH-HHHHHHTTEEEEEEEEECCCGGGTTCSSCCCBSCTTHHHHHTCEEE
T ss_pred             cCC-HHHHHHHHHHHh---CCCCcEEEECCCHH-HHHHHHHHHhcCCEEEEEccccccccCCccccccHHHHhhhceeec
Confidence            643 235555555542   46899999999974 89999999999999999986542      22345567888999999


Q ss_pred             EeecC--CC----cHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          304 GIFRY--RS----TWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       304 ~~~~~--~~----~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      ++..+  .+    .++++++++++|++  ++.+.+.|+|  +++++|++.+.+++..||+|+++
T Consensus       283 g~~~~~~~~~~~~~~~~~~~l~~~g~i--~~~~~~~~~l--~~~~~A~~~~~~~~~~gKvvv~~  342 (345)
T 2j3h_A          283 GFVVSDFYDKYSKFLEFVLPHIREGKI--TYVEDVADGL--EKAPEALVGLFHGKNVGKQVVVV  342 (345)
T ss_dssp             ECCGGGGGGGHHHHHHHHHHHHHTTSS--CCCEEEEESG--GGSHHHHHHHHTTCCSSEEEEES
T ss_pred             eeeehhhhhhHHHHHHHHHHHHHCCCC--cCcccccCCH--HHHHHHHHHHHcCCCceEEEEEe
Confidence            87654  22    38889999999999  5667678899  99999999999998899999874

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=1.2e-43  Score=356.52  Aligned_cols=291  Identities=19%  Similarity=0.265  Sum_probs=242.8

Q ss_pred             CCceEEEEecC--CCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEe
Q 018075           23 IKTLKIQPYHL--PTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVAL  100 (361)
Q Consensus        23 ~~~l~~~~~~~--p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~  100 (361)
                      ++.|++++.+.  |+|++|||+|||+++|||++|+++..|..      ..|.++|||++|+|+++|++|++|++||||+.
T Consensus       221 ~~~L~~~~~~~p~~~~~~~eVlV~V~a~gin~~D~~~~~G~~------~~~~~lG~E~aG~V~~vG~~V~~~~vGDrV~~  294 (795)
T 3slk_A          221 LDGLALVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMY------PGVASLGSEGAGVVVETGPGVTGLAPGDRVMG  294 (795)
T ss_dssp             STTEEECCCHHHHSCCCSSEEEEEEEEEEECHHHHHHTTTCC------SSCCCSCCCEEEEEEEECSSCCSSCTTCEEEE
T ss_pred             ccceEEEeCCccCCCCCCCEEEEEEEEEccCHHHHHHHcCCC------CCCccccceeEEEEEEeCCCCCcCCCCCEEEE
Confidence            46799988775  56899999999999999999999887743      34668999999999999999999999999986


Q ss_pred             cCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccc-hhHHHHHHHH-hcCCCC
Q 018075          101 EPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACR-RANVGP  178 (361)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-~~~~a~~~l~-~~~~~~  178 (361)
                      .                             ..|+|+||++++++.++++|+++++++||.++ .+.|||+++. .+++++
T Consensus       295 ~-----------------------------~~G~~ae~~~v~~~~~~~iP~~ls~~~AA~l~~~~~Ta~~al~~~a~l~~  345 (795)
T 3slk_A          295 M-----------------------------IPKAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGLRP  345 (795)
T ss_dssp             C-----------------------------CSSCSSSEEEEETTSEEECCTTCCHHHHHHHHHHHHHHHCCCCCCTCCCT
T ss_pred             E-----------------------------ecCCCcCEEEeehHHEEECCCCCCHHHHHhhhHHHHHHHHHHHHHhCCCC
Confidence            3                             36999999999999999999999999999775 6888999885 489999


Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          179 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       179 g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      |++|||+| +|++|++++|+||.+|+ .|+++++++ +.++++ +|+++++++.  ..++.+.+++.+  +++|+|+|||
T Consensus       346 G~~VLI~gaaGgvG~~aiqlAk~~Ga-~V~~t~~~~-k~~~l~-lga~~v~~~~--~~~~~~~i~~~t--~g~GvDvVld  418 (795)
T 3slk_A          346 GESLLVHSAAGGVGMAAIQLARHLGA-EVYATASED-KWQAVE-LSREHLASSR--TCDFEQQFLGAT--GGRGVDVVLN  418 (795)
T ss_dssp             TCCEEEESTTBHHHHHHHHHHHHTTC-CEEEECCGG-GGGGSC-SCGGGEECSS--SSTHHHHHHHHS--CSSCCSEEEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeChH-Hhhhhh-cChhheeecC--ChhHHHHHHHHc--CCCCeEEEEE
Confidence            99999999 59999999999999999 577776655 556655 9999888753  357777776553  5789999999


Q ss_pred             ccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-------CCcHHHHHHHHHcCCCCCCCce
Q 018075          258 CVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-------RSTWPLCIEFLRSGKIDVKPLI  330 (361)
Q Consensus       258 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-------~~~~~~~~~~l~~g~~~~~~~~  330 (361)
                      +++++ .++.++++|+++|+++.+|.......... ....+++++.++...       .+.++++++++++|++  ++.+
T Consensus       419 ~~gg~-~~~~~l~~l~~~Gr~v~iG~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~l~~~g~l--~p~~  494 (795)
T 3slk_A          419 SLAGE-FADASLRMLPRGGRFLELGKTDVRDPVEV-ADAHPGVSYQAFDTVEAGPQRIGEMLHELVELFEGRVL--EPLP  494 (795)
T ss_dssp             CCCTT-TTHHHHTSCTTCEEEEECCSTTCCCHHHH-HHHSSSEEEEECCGGGGHHHHHHHHHHHHHHHHHTTSC--CCCC
T ss_pred             CCCcH-HHHHHHHHhcCCCEEEEeccccccCcccc-cccCCCCEEEEeeccccCHHHHHHHHHHHHHHHHcCCc--CCCc
Confidence            99976 88999999999999999996654322222 122356666665432       4568899999999999  6678


Q ss_pred             EEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          331 THRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       331 ~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                      .++|++  +++++|++.++++++.||+|+++
T Consensus       495 ~~~~~l--~~~~eA~~~l~~g~~~GKvVl~~  523 (795)
T 3slk_A          495 VTAWDV--RQAPEALRHLSQARHVGKLVLTM  523 (795)
T ss_dssp             EEEEEG--GGHHHHHHHHHHTCCCBEEEEEC
T ss_pred             ceeEcH--HHHHHHHHHHhcCCccceEEEec
Confidence            899999  99999999999999999999974

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=100.00  E-value=2.8e-41  Score=309.30  Aligned_cols=298  Identities=17%  Similarity=0.196  Sum_probs=241.5

Q ss_pred             cceEEEEee-------CCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeC
Q 018075           14 QNMAAWLLG-------IKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVG   86 (361)
Q Consensus        14 ~~~~~~~~~-------~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG   86 (361)
                      +|++.++.+       ++.++++++|.|+|++|||||||.++|||+.|... .      .+...|+++|||++|+|++. 
T Consensus         7 ~mka~~~~~~~~g~~~~~~l~~~e~~~P~~~~~eVlVkv~a~gi~~~~~~~-~------~~~~~p~~~g~e~~G~Vv~~-   78 (333)
T 1v3u_A            7 KAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIA-S------KRLKEGAVMMGQQVARVVES-   78 (333)
T ss_dssp             EEEEEEECC-----CCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHH-T------TTCCTTSBCCCCEEEEEEEE-
T ss_pred             cccEEEEeecCCCCCCccceEEEeCCCCCCCCCEEEEEEEEeccCHHHccc-c------CcCCCCcccccceEEEEEec-
Confidence            455555544       25699999999999999999999999999988732 1      12356889999999999995 


Q ss_pred             CCCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCC----CCcccc-c-c
Q 018075           87 SEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDN----VSLEEG-A-M  160 (361)
Q Consensus        87 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~----~~~~~a-a-~  160 (361)
                       ++++|++||||+.                               .|+|+||++++++.++++|++    ++++++ | +
T Consensus        79 -~v~~~~vGdrV~~-------------------------------~g~~aey~~v~~~~~~~iP~~~~~~~~~~~a~a~l  126 (333)
T 1v3u_A           79 -KNSAFPAGSIVLA-------------------------------QSGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTI  126 (333)
T ss_dssp             -SCTTSCTTCEEEE-------------------------------CCCSBSEEEESSTTEEECC--CCTTSCGGGGGTTT
T ss_pred             -CCCCCCCCCEEEe-------------------------------cCceEEEEEechHHeEEcCcccccCCCHHHHHHHh
Confidence             5788999999986                               488999999999999999997    888763 4 5


Q ss_pred             cchhHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchh
Q 018075          161 CEPLSVGVHACR-RANVGPETNVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVD  238 (361)
Q Consensus       161 ~~~~~~a~~~l~-~~~~~~g~~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~  238 (361)
                      ..++.|||+++. .+++++|++|||+|+ |++|++++|+++..|+ .|+++++++++.+.++++|++.++++.. ..++.
T Consensus       127 ~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~~~g~~~~~d~~~-~~~~~  204 (333)
T 1v3u_A          127 GMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQIGFDAAFNYKT-VNSLE  204 (333)
T ss_dssp             SHHHHHHHHHHHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTS-CSCHH
T ss_pred             CChHHHHHHHHHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCcEEEecCC-HHHHH
Confidence            568999999995 588999999999995 9999999999999999 7889999999999999999988877542 14555


Q ss_pred             HHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC------c-ceechHhhhcCcEEEEeecC---
Q 018075          239 TDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE------M-TVALTPAAAREVDVIGIFRY---  308 (361)
Q Consensus       239 ~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~-~~~~~~~~~~~~~i~~~~~~---  308 (361)
                      +.+.++.   ++++|++||++|.+ .++.++++|+++|+++.+|.....      . .++...++.+++++.|+..+   
T Consensus       205 ~~~~~~~---~~~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  280 (333)
T 1v3u_A          205 EALKKAS---PDGYDCYFDNVGGE-FLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQ  280 (333)
T ss_dssp             HHHHHHC---TTCEEEEEESSCHH-HHHHHHTTEEEEEEEEECCCCC-------CCBCCCHHHHHHTTCEEEECCGGGCC
T ss_pred             HHHHHHh---CCCCeEEEECCChH-HHHHHHHHHhcCCEEEEEeccccccCCCCCCCCcCHHHHhhcCceEEEEehhhcc
Confidence            5555543   35899999999975 789999999999999999865431      1 12445678899999998653   


Q ss_pred             ----CCcHHHHHHHHHcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          309 ----RSTWPLCIEFLRSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       309 ----~~~~~~~~~~l~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                          .+.++++++++++|++++.  ....++|  +++++|++.+.+++..||+|+++
T Consensus       281 ~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l--~~~~~A~~~~~~~~~~gKvvl~~  333 (333)
T 1v3u_A          281 GDVREKALRDLMKWVLEGKIQYH--EHVTKGF--ENMPAAFIEMLNGANLGKAVVTA  333 (333)
T ss_dssp             THHHHHHHHHHHHHHHTTSSCCC--EEEEECG--GGHHHHHHHHHTTCCSBEEEEEC
T ss_pred             hHHHHHHHHHHHHHHHCCCccCc--cccccCH--HHHHHHHHHHHcCCCCceEEEeC
Confidence                2456789999999999544  4445788  99999999999998899999975

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=100.00  E-value=6.1e-32  Score=297.61  Aligned_cols=290  Identities=20%  Similarity=0.242  Sum_probs=230.0

Q ss_pred             CceEEEEecCCC-C--CCCcEEEEEeeeecCcchhhhhcccccccc----cCCCCcccCcceeEEEEEeCCCCCCCCCCC
Q 018075           24 KTLKIQPYHLPT-L--GPQDVKVRIKALGICGSDVHHFKTMRCANF----IVKKPMVIGHECAGIIEEVGSEVKSLEVGD   96 (361)
Q Consensus        24 ~~l~~~~~~~p~-~--~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~----~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd   96 (361)
                      +++.+++.+... +  .++||+|+|+++|+|+.|++...|......    ....|+++|+|++|+|          .+||
T Consensus      1542 ~sl~~~~~~~~~~~~l~~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~V----------~vGd 1611 (2512)
T 2vz8_A         1542 SSIRWVCSPLHYALPASCQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRD----------ASGR 1611 (2512)
T ss_dssp             TSEEEEECTTTTCCCHHHHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEEE----------TTSC
T ss_pred             CceEEEecCcccccCCCCCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEEEE----------ccCC
Confidence            567888766543 3  379999999999999999998887542211    1134678999999987          3799


Q ss_pred             EEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccc-hhHHHHHHHH-hc
Q 018075           97 RVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVHACR-RA  174 (361)
Q Consensus        97 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-~~~~a~~~l~-~~  174 (361)
                      +|+..                            ...|+|+||++++++.++++|+++++++||.++ ++.|||+++. .+
T Consensus      1612 rV~g~----------------------------~~~G~~Aeyv~vp~~~v~~iPd~ls~~eAA~lp~~~~TA~~al~~~a 1663 (2512)
T 2vz8_A         1612 RVMGM----------------------------VPAEGLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRG 1663 (2512)
T ss_dssp             CEEEE----------------------------CSSCCSBSEEECCGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTT
T ss_pred             EEEEe----------------------------ecCCceeeEEEcccceEEEeCCCCCHHHHHHhHHHHHHHHHHHHHHh
Confidence            99863                            135899999999999999999999999999776 7889999985 48


Q ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhhcC
Q 018075          175 NVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       175 ~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      ++++|++|||+| +|++|++++|+||..|+ .|++++.++++.+++++    +|+++++++.  ..++.+.+.+..  .+
T Consensus      1664 ~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga-~Viat~~s~~k~~~l~~~~~~lga~~v~~~~--~~~~~~~i~~~t--~g 1738 (2512)
T 2vz8_A         1664 RMQPGESVLIHSGSGGVGQAAIAIALSRGC-RVFTTVGSAEKRAYLQARFPQLDETCFANSR--DTSFEQHVLRHT--AG 1738 (2512)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTCCSTTEEESS--SSHHHHHHHHTT--TS
T ss_pred             cCCCCCEEEEEeCChHHHHHHHHHHHHcCC-EEEEEeCChhhhHHHHhhcCCCCceEEecCC--CHHHHHHHHHhc--CC
Confidence            899999999998 69999999999999999 68888899999998886    7888887753  346666655443  46


Q ss_pred             CCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC-cceechHhhhcCcEEEEeecC------CCcHHHHHHHH---
Q 018075          250 SGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY------RSTWPLCIEFL---  319 (361)
Q Consensus       250 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~l---  319 (361)
                      .|+|+|||++++ +.++.++++|+++|+++.+|..... ........+.+++++.+....      +..++.+++++   
T Consensus      1739 ~GvDvVld~~g~-~~l~~~l~~L~~~Gr~V~iG~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~l~~l~~~ 1817 (2512)
T 2vz8_A         1739 KGVDLVLNSLAE-EKLQASVRCLAQHGRFLEIGKFDLSNNHALGMAVFLKNVTFHGILLDSLFEEGGATWQEVSELLKAG 1817 (2512)
T ss_dssp             CCEEEEEECCCH-HHHHHHHTTEEEEEEEEECCCHHHHTTCEEEGGGGGGCCEEEECCGGGTTSSCCHHHHHHHHHHHHH
T ss_pred             CCceEEEECCCc-hHHHHHHHhcCCCcEEEEeecccccccCcccccccccCCcEEEeeHHHHhhhCHHHHHHHHHHHHHH
Confidence            789999999984 5899999999999999999854321 112223456788888887542      23455555554   


Q ss_pred             -HcCCCCCCCceEEEecCChhhHHHHHHHHhcCCCceEEEEeC
Q 018075          320 -RSGKIDVKPLITHRFGFTQKEIEDAFEISAQGGNAIKVMFNL  361 (361)
Q Consensus       320 -~~g~~~~~~~~~~~~~l~~~~~~~a~~~l~~~~~~gkvvi~~  361 (361)
                       .+|.+  ++.++++|++  +++++|++.+.++++.||+|+++
T Consensus      1818 ~~~g~l--~p~i~~~f~l--~ei~eA~~~l~~g~~~GKvVi~~ 1856 (2512)
T 2vz8_A         1818 IQEGVV--QPLKCTVFPR--TKVEAAFRYMAQGKHIGKVVIQV 1856 (2512)
T ss_dssp             HTTTCS--CCCCEEEEES--STHHHHHHHHHTTCCSSEEEEEC
T ss_pred             HHcCCc--CCCcceEecH--HHHHHHHHhhhccCccceEEEEC
Confidence             46777  6678899999  99999999999999999999864

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.85  E-value=1.2e-20  Score=159.24  Aligned_cols=177  Identities=20%  Similarity=0.344  Sum_probs=129.3

Q ss_pred             CceEECCCCCCccccccc-chhHHHHHHHHh-cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHH
Q 018075          144 KLCYKLPDNVSLEEGAMC-EPLSVGVHACRR-ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR  220 (361)
Q Consensus       144 ~~~~~vP~~~~~~~aa~~-~~~~~a~~~l~~-~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~  220 (361)
                      +.++++|+++++++||.+ .++.+||+++.+ .++++|++|||+| +|++|++++++++..|+ .|+++++++++.+.++
T Consensus         2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~   80 (198)
T 1pqw_A            2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLS   80 (198)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHH
T ss_pred             CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence            568899999999999977 489999999965 7899999999999 69999999999999999 6888999999998999


Q ss_pred             HcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC--CcceechHhhhc
Q 018075          221 NLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT--EMTVALTPAAAR  298 (361)
Q Consensus       221 ~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~  298 (361)
                      ++|++.++++..  .++.+.+.+..  .+.++|++||++|.. .++.++++|+++|+++.+|....  ...++.. .+.+
T Consensus        81 ~~g~~~~~d~~~--~~~~~~~~~~~--~~~~~D~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~  154 (198)
T 1pqw_A           81 RLGVEYVGDSRS--VDFADEILELT--DGYGVDVVLNSLAGE-AIQRGVQILAPGGRFIELGKKDVYADASLGLA-ALAK  154 (198)
T ss_dssp             TTCCSEEEETTC--STHHHHHHHHT--TTCCEEEEEECCCTH-HHHHHHHTEEEEEEEEECSCGGGTTTCEEEGG-GGTT
T ss_pred             HcCCCEEeeCCc--HHHHHHHHHHh--CCCCCeEEEECCchH-HHHHHHHHhccCCEEEEEcCCCCcCcCcCChh-HhcC
Confidence            999988776543  34444444332  245799999999865 89999999999999999986542  2223332 3457


Q ss_pred             CcEEEEeec------C----CCcHHHHHHHHHcCCCCCC
Q 018075          299 EVDVIGIFR------Y----RSTWPLCIEFLRSGKIDVK  327 (361)
Q Consensus       299 ~~~i~~~~~------~----~~~~~~~~~~l~~g~~~~~  327 (361)
                      ++++.++..      .    .+.++++++++++|++++.
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~  193 (198)
T 1pqw_A          155 SASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEVL  193 (198)
T ss_dssp             TCEEEECCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCC
T ss_pred             CcEEEEEehHHhhccCHHHHHHHHHHHHHHHHcCCccCC
Confidence            788875421      1    3568899999999999543

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=99.20  E-value=5.1e-11  Score=103.44  Aligned_cols=169  Identities=11%  Similarity=0.072  Sum_probs=113.2

Q ss_pred             CCCCCEEEecC-------CcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcc------cc
Q 018075           92 LEVGDRVALEP-------GISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLE------EG  158 (361)
Q Consensus        92 ~~~Gd~V~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~------~a  158 (361)
                      +++||+|++.+       ...|+.|..|+.|....|+...     ...|+..      +..+++-|+...+.      .+
T Consensus         4 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~G~~~~~~~~g-----~~~G~~~------~~~~~~~p~~~~~~~~~~~~~~   72 (248)
T 2yvl_A            4 FKEGEYVLIRFGEKKFLRKLLPKQSLSVKKSVLKFDEVIG-----KPEGVKI------NGFEVYRPTLEEIILLGFERKT   72 (248)
T ss_dssp             CCTTCEEEEEETTEEEEEECCTTCEEEETTEEEEGGGTTT-----CCTTEEE------TTEEEECCCHHHHHHHTSCCSS
T ss_pred             CCCCCEEEEEeCCeEEEEEEcCCCEEecCCceEEHHHhcC-----CCCCCEE------EEEEEeCCCHHHHHHhcCcCCC
Confidence            89999999987       5678888888888877776431     1123322      34445555432222      12


Q ss_pred             cccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc----CC-CEEeecCCC
Q 018075          159 AMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GA-DETAKVSTD  233 (361)
Q Consensus       159 a~~~~~~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~-~~~~~~~~~  233 (361)
                      +.+.+.. +...+...+++++++||.+|+| .|..++.+++. +. .+++++.+++..+.+++.    +. ..+..... 
T Consensus        73 ~~~~~~~-~~~~~~~~~~~~~~~vldiG~G-~G~~~~~l~~~-~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~-  147 (248)
T 2yvl_A           73 QIIYPKD-SFYIALKLNLNKEKRVLEFGTG-SGALLAVLSEV-AG-EVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNV-  147 (248)
T ss_dssp             CCCCHHH-HHHHHHHTTCCTTCEEEEECCT-TSHHHHHHHHH-SS-EEEEECSCHHHHHHHHHHHHHTTCCTTEEEECS-
T ss_pred             Ccccchh-HHHHHHhcCCCCCCEEEEeCCC-ccHHHHHHHHh-CC-EEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEc-
Confidence            2222333 3355666788999999999998 59999999998 66 799999999988877763    33 11211111 


Q ss_pred             ccchhHHHHHHHhhcCCCccEEEEccCCh-HHHHHHHHhhcCCCEEEEEcc
Q 018075          234 IEDVDTDVGKIQNAMGSGIDVSFDCVGFD-KTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~~l~~~G~~v~~g~  283 (361)
                        +..+..     ..+.++|+|+...+.+ ..++.+.+.|+++|+++....
T Consensus       148 --d~~~~~-----~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  191 (248)
T 2yvl_A          148 --DFKDAE-----VPEGIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLLP  191 (248)
T ss_dssp             --CTTTSC-----CCTTCBSEEEECSSCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred             --Chhhcc-----cCCCcccEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence              221110     0135799999988766 688999999999999998753

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=98.95  E-value=5.1e-12  Score=117.66  Aligned_cols=182  Identities=16%  Similarity=0.231  Sum_probs=130.3

Q ss_pred             cccCcceeEEEEEeCCCCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCC
Q 018075           72 MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPD  151 (361)
Q Consensus        72 ~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~  151 (361)
                      ...|++.++.|.++|++++++.+|+.++.......    +              . .....|++++|+......++++|+
T Consensus        75 ~~~g~~a~~~i~~v~~Glds~~vGe~~Il~qvk~~----~--------------~-~~~~~G~~~~~~~~~~~~a~~~~k  135 (404)
T 1gpj_A           75 VKRGSEAVRHLFRVASGLESMMVGEQEILRQVKKA----Y--------------D-RAARLGTLDEALKIVFRRAINLGK  135 (404)
T ss_dssp             EEEHHHHHHHHHHHHTTTTSSSTTCHHHHHHHHHH----H--------------H-HHHHHTCCCHHHHHHHHHHHHHHH
T ss_pred             eecCchHhhhheeeccCCCCCcCCcchhHHHHHHH----H--------------H-HHHHcCCchHHHHHHHHHHhhhhc
Confidence            35889999999999999999999998742100000    0              0 001236677888777788899999


Q ss_pred             CCCcccccccchhHHHHHHHHhcC----CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHH-HHHHHcCCCE
Q 018075          152 NVSLEEGAMCEPLSVGVHACRRAN----VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRL-SIARNLGADE  226 (361)
Q Consensus       152 ~~~~~~aa~~~~~~~a~~~l~~~~----~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~-~~~~~lg~~~  226 (361)
                      +++.+.++...+..+++.+++...    -.+|++|+|+|+|++|.++++.++..|+..|++++++.++. ++++++|++.
T Consensus       136 ~v~~~~~~~~~~~s~a~~av~~a~~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~~~  215 (404)
T 1gpj_A          136 RAREETRISEGAVSIGSAAVELAERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEA  215 (404)
T ss_dssp             HHHHHSSTTCSCCSHHHHHHHHHHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEE
T ss_pred             cCcchhhhcCCCccHHHHHHHHHHHHhccccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCce
Confidence            988877776667777887765422    25899999999999999999999999997799999998886 7888899752


Q ss_pred             EeecCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHH--HHHHh--h--cCCCEEEEEccCC
Q 018075          227 TAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMS--TALNA--T--RPGGKVCLIGLAK  285 (361)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~--~~~~~--l--~~~G~~v~~g~~~  285 (361)
                       +.+    .++.+    ..    .++|+|++|++.+..+.  ..+..  +  +++|.++.++...
T Consensus       216 -~~~----~~l~~----~l----~~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia~  267 (404)
T 1gpj_A          216 -VRF----DELVD----HL----ARSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIAN  267 (404)
T ss_dssp             -CCG----GGHHH----HH----HTCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECCS
T ss_pred             -ecH----HhHHH----Hh----cCCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEccC
Confidence             222    12222    21    36999999998663321  44555  4  6678888887654

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.86  E-value=4.1e-09  Score=96.57  Aligned_cols=135  Identities=19%  Similarity=0.294  Sum_probs=94.5

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEc
Q 018075          179 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  258 (361)
Q Consensus       179 g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  258 (361)
                      +++|+|+|+|++|+++++.++.+|+ .|+++++++++.+.+++++...+........++.+   .+     .++|+||+|
T Consensus       167 ~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~---~~-----~~~DvVI~~  237 (361)
T 1pjc_A          167 PGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSNSAEIET---AV-----AEADLLIGA  237 (361)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHH---HH-----HTCSEEEEC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHH---HH-----cCCCEEEEC
Confidence            4999999999999999999999999 79999999999998888775432111111112211   12     269999999


Q ss_pred             cCChHH------HHHHHHhhcCCCEEEEEccCCC-------CcceechHhhhcCcEEEEeecC-------------CCcH
Q 018075          259 VGFDKT------MSTALNATRPGGKVCLIGLAKT-------EMTVALTPAAAREVDVIGIFRY-------------RSTW  312 (361)
Q Consensus       259 ~g~~~~------~~~~~~~l~~~G~~v~~g~~~~-------~~~~~~~~~~~~~~~i~~~~~~-------------~~~~  312 (361)
                      ++.+..      .+..++.|+++|+++.++...+       ..+++...+..+++++.+....             ...+
T Consensus       238 ~~~~~~~~~~li~~~~~~~~~~g~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~~~~~lp~~~~~~~s~~~~~~~~  317 (361)
T 1pjc_A          238 VLVPGRRAPILVPASLVEQMRTGSVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPNMPGAVPWTATQALNNSTL  317 (361)
T ss_dssp             CCCTTSSCCCCBCHHHHTTSCTTCEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEECCSCGGGGCHHHHHHHHHHHHH
T ss_pred             CCcCCCCCCeecCHHHHhhCCCCCEEEEEecCCCCCCccccCCCCCCCEEEECCEEEEEeCCcchhhHHHHHHHHHHHHH
Confidence            987632      5678899999999999986532       2233333455677777665432             2345


Q ss_pred             HHHHHHHHcC
Q 018075          313 PLCIEFLRSG  322 (361)
Q Consensus       313 ~~~~~~l~~g  322 (361)
                      +.+++++++|
T Consensus       318 ~~l~~l~~~G  327 (361)
T 1pjc_A          318 PYVVKLANQG  327 (361)
T ss_dssp             HHHHHHHHHG
T ss_pred             HHHHHHHhCC
Confidence            6777888776

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.65  E-value=9.2e-08  Score=88.34  Aligned_cols=142  Identities=17%  Similarity=0.227  Sum_probs=97.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEE-eecCC-----Cc--------cc----hhH
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET-AKVST-----DI--------ED----VDT  239 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~-~~~~~-----~~--------~~----~~~  239 (361)
                      ++++|+|+|+|.+|++++++++.+|+ .|++.+.++++.+.++++|++.+ ++...     ..        .+    ...
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~  249 (384)
T 1l7d_A          171 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  249 (384)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence            68999999999999999999999999 69999999999888888998654 12110     00        00    111


Q ss_pred             HHHHHHhhcCCCccEEEEcc---CChH--H-HHHHHHhhcCCCEEEEEccCC-CCc--ceechHhhhcCcEEEEeecCCC
Q 018075          240 DVGKIQNAMGSGIDVSFDCV---GFDK--T-MSTALNATRPGGKVCLIGLAK-TEM--TVALTPAAAREVDVIGIFRYRS  310 (361)
Q Consensus       240 ~~~~~~~~~~~~~d~vld~~---g~~~--~-~~~~~~~l~~~G~~v~~g~~~-~~~--~~~~~~~~~~~~~i~~~~~~~~  310 (361)
                      .+.+.    -.++|+||+++   |.+.  . ....++.|++++.++.++... +..  ..+...+..+++++.+....+.
T Consensus       250 ~l~~~----~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~~gg~~~~~~~~~~~~~~~v~i~g~~~~p~  325 (384)
T 1l7d_A          250 AVLKE----LVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTNVPS  325 (384)
T ss_dssp             HHHHH----HTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSSTTCCTTCEEEETTEEEECCSSGGG
T ss_pred             HHHHH----hCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecCCCCCeecccCCcEEEECCEEEEEeCCCcc
Confidence            12222    14799999999   5321  2 377889999999999998532 221  1223345567788888766644


Q ss_pred             c-HHHHHHHHHcCCC
Q 018075          311 T-WPLCIEFLRSGKI  324 (361)
Q Consensus       311 ~-~~~~~~~l~~g~~  324 (361)
                      . .+.+.+++.++.+
T Consensus       326 ~~~~~a~~l~~~~~~  340 (384)
T 1l7d_A          326 RVAADASPLFAKNLL  340 (384)
T ss_dssp             GGHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHhHH
Confidence            4 4558888888765

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.63  E-value=1.9e-07  Score=85.72  Aligned_cols=135  Identities=19%  Similarity=0.278  Sum_probs=86.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH-cCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  256 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  256 (361)
                      ++++|+|+|+|.+|..+++.++.+|+ .|+++++++++.+.+++ +|.....+.. +..+    +.+..    .++|+++
T Consensus       165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~~~~~~~~~~~~~g~~~~~~~~-~~~~----l~~~~----~~~DvVi  234 (369)
T 2eez_A          165 APASVVILGGGTVGTNAAKIALGMGA-QVTILDVNHKRLQYLDDVFGGRVITLTA-TEAN----IKKSV----QHADLLI  234 (369)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSEEEEEC-CHHH----HHHHH----HHCSEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCceEEEecC-CHHH----HHHHH----hCCCEEE
Confidence            46999999999999999999999999 79999999998887765 7765322221 1122    22221    2699999


Q ss_pred             EccCChHH------HHHHHHhhcCCCEEEEEccCCCC-------cceechHhhhcCcEEEEeecC-------------CC
Q 018075          257 DCVGFDKT------MSTALNATRPGGKVCLIGLAKTE-------MTVALTPAAAREVDVIGIFRY-------------RS  310 (361)
Q Consensus       257 d~~g~~~~------~~~~~~~l~~~G~~v~~g~~~~~-------~~~~~~~~~~~~~~i~~~~~~-------------~~  310 (361)
                      +|++.+..      .+..++.|+++|+++.++...+.       .+++...+..+++.+.+....             ..
T Consensus       235 ~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~~~~gg~~d~~ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~as~~~~~~  314 (369)
T 2eez_A          235 GAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVAVDQGGCVETIRPTTHAEPTYVVDGVVHYGVANMPGAVPRTSTFALTNQ  314 (369)
T ss_dssp             ECCC-------CCSCHHHHTTSCTTCEEEECC-------------------CEETTEEEECCSCSGGGSHHHHHHHHHHH
T ss_pred             ECCCCCccccchhHHHHHHHhhcCCCEEEEEecCCCCCCCcccCCCCCCCEEEECCEEEEeeCCcchhcHHHHHHHHHHH
Confidence            99996632      57888999999999998854321       122222344566666665432             23


Q ss_pred             cHHHHHHHHHcC
Q 018075          311 TWPLCIEFLRSG  322 (361)
Q Consensus       311 ~~~~~~~~l~~g  322 (361)
                      .++.+++++.+|
T Consensus       315 ~~~~l~~l~~~g  326 (369)
T 2eez_A          315 TLPYVLKLAEKG  326 (369)
T ss_dssp             HHHHHHHHHHHT
T ss_pred             HHHHHHHHHhcC
Confidence            355667777666

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.61  E-value=1.4e-07  Score=86.73  Aligned_cols=97  Identities=15%  Similarity=0.291  Sum_probs=74.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH-cCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  256 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  256 (361)
                      +|++|+|+|+|.+|..+++.++.+|+ .|++.++++++.+.+++ +|+....++. ...++    .+..    .++|+|+
T Consensus       167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~~~g~~~~~~~~-~~~~l----~~~l----~~aDvVi  236 (377)
T 2vhw_A          167 EPADVVVIGAGTAGYNAARIANGMGA-TVTVLDINIDKLRQLDAEFCGRIHTRYS-SAYEL----EGAV----KRADLVI  236 (377)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSSEEEEC-CHHHH----HHHH----HHCSEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhcCCeeEeccC-CHHHH----HHHH----cCCCEEE
Confidence            58999999999999999999999999 79999999999887776 7765322221 11122    2221    2699999


Q ss_pred             EccCChHH------HHHHHHhhcCCCEEEEEccC
Q 018075          257 DCVGFDKT------MSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       257 d~~g~~~~------~~~~~~~l~~~G~~v~~g~~  284 (361)
                      +|++.+..      .+..++.|+++|.++.++..
T Consensus       237 ~~~~~p~~~t~~li~~~~l~~mk~g~~iV~va~~  270 (377)
T 2vhw_A          237 GAVLVPGAKAPKLVSNSLVAHMKPGAVLVDIAID  270 (377)
T ss_dssp             ECCCCTTSCCCCCBCHHHHTTSCTTCEEEEGGGG
T ss_pred             ECCCcCCCCCcceecHHHHhcCCCCcEEEEEecC
Confidence            99986643      67889999999999999853

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.55  E-value=2.3e-07  Score=85.90  Aligned_cols=140  Identities=16%  Similarity=0.207  Sum_probs=93.4

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCC-------------ccch----hHH
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTD-------------IEDV----DTD  240 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~-------------~~~~----~~~  240 (361)
                      ++++|+|+|+|.+|+.++++++.+|+ .|++++.+.++.+.++++|++.+. ++..             ..++    ...
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~v~D~~~~~~~~~~~lGa~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~  248 (401)
T 1x13_A          171 PPAKVMVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLE-LDFKEEAGSGDGYAKVMSDAFIKAEMEL  248 (401)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCGGGHHHHHHTTCEECC-C--------CCHHHHHHSHHHHHHHHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCEEEE-ecccccccccccchhhccHHHHHHHHHH
Confidence            58999999999999999999999999 799999999999888999986532 1110             0011    001


Q ss_pred             HHHHHhhcCCCccEEEEccCCh-----HH-HHHHHHhhcCCCEEEEEccC-CCCccee--ch-HhhhcCcEEEEeecCCC
Q 018075          241 VGKIQNAMGSGIDVSFDCVGFD-----KT-MSTALNATRPGGKVCLIGLA-KTEMTVA--LT-PAAAREVDVIGIFRYRS  310 (361)
Q Consensus       241 ~~~~~~~~~~~~d~vld~~g~~-----~~-~~~~~~~l~~~G~~v~~g~~-~~~~~~~--~~-~~~~~~~~i~~~~~~~~  310 (361)
                      +.++.    .++|+||++++.+     .. ....++.|++++.++.++.. ++.....  .. .+..+++++.+....+.
T Consensus       249 l~e~~----~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~~~~~~p~~~~~gv~i~g~~~~p~  324 (401)
T 1x13_A          249 FAAQA----KEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEYTVPGEIFTTENGVKVIGYTDLPG  324 (401)
T ss_dssp             HHHHH----HHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTCCTTSEEECTTSCEEECCSCTGG
T ss_pred             HHHHh----CCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCcccCCCceEEECCEEEEeeCCCcc
Confidence            22221    3699999995332     12 36789999999999999854 2222221  12 15567888888766544


Q ss_pred             cHH-HHHHHHHcCC
Q 018075          311 TWP-LCIEFLRSGK  323 (361)
Q Consensus       311 ~~~-~~~~~l~~g~  323 (361)
                      .+. .+.+++.++.
T Consensus       325 ~~~~~a~~ll~~~~  338 (401)
T 1x13_A          325 RLPTQSSQLYGTNL  338 (401)
T ss_dssp             GSHHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHhH
Confidence            443 3555555543

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.51  E-value=3.7e-07  Score=86.18  Aligned_cols=115  Identities=19%  Similarity=0.221  Sum_probs=87.8

Q ss_pred             hHHHHHHHHhc--CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHH
Q 018075          164 LSVGVHACRRA--NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDV  241 (361)
Q Consensus       164 ~~~a~~~l~~~--~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~  241 (361)
                      ..++|+++++.  ...+|++|+|+|.|.+|..+++.++.+|+ +|++++.++++.+.++++|++. .       ++.+. 
T Consensus       257 ~~s~~~g~~r~~~~~l~GktV~IiG~G~IG~~~A~~lka~Ga-~Viv~d~~~~~~~~A~~~Ga~~-~-------~l~e~-  326 (494)
T 3ce6_A          257 RHSLIDGINRGTDALIGGKKVLICGYGDVGKGCAEAMKGQGA-RVSVTEIDPINALQAMMEGFDV-V-------TVEEA-  326 (494)
T ss_dssp             HHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE-C-------CHHHH-
T ss_pred             hhhhhHHHHhccCCCCCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCEE-e-------cHHHH-
Confidence            34456666553  37899999999999999999999999999 7999999999988888999852 1       12111 


Q ss_pred             HHHHhhcCCCccEEEEccCChHHHH-HHHHhhcCCCEEEEEccCCCCcceechHhhh
Q 018075          242 GKIQNAMGSGIDVSFDCVGFDKTMS-TALNATRPGGKVCLIGLAKTEMTVALTPAAA  297 (361)
Q Consensus       242 ~~~~~~~~~~~d~vld~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~  297 (361)
                        +     .++|+|+++++....+. ..++.|+++|+++.+|....  .++...+..
T Consensus       327 --l-----~~aDvVi~atgt~~~i~~~~l~~mk~ggilvnvG~~~~--eId~~aL~~  374 (494)
T 3ce6_A          327 --I-----GDADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHFDN--EIDMAGLER  374 (494)
T ss_dssp             --G-----GGCSEEEECSSSSCSBCHHHHHHSCTTCEEEECSSSGG--GBCHHHHHH
T ss_pred             --H-----hCCCEEEECCCCHHHHHHHHHHhcCCCcEEEEeCCCCC--ccCHHHHHH
Confidence              1     47999999999875555 78899999999999986543  233444443

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=98.35  E-value=2.8e-06  Score=74.66  Aligned_cols=100  Identities=15%  Similarity=0.301  Sum_probs=75.3

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc----CCCEEeecCCCccchhHHHHHHHhhc
Q 018075          173 RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       173 ~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      .+++++|++||.+|||+.+..++.+++..|+ .|++++.+++..+.+++.    |.+.+-...   .+..+    +   .
T Consensus       117 la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga-~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~---gDa~~----l---~  185 (298)
T 3fpf_A          117 LGRFRRGERAVFIGGGPLPLTGILLSHVYGM-RVNVVEIEPDIAELSRKVIEGLGVDGVNVIT---GDETV----I---D  185 (298)
T ss_dssp             HTTCCTTCEEEEECCCSSCHHHHHHHHTTCC-EEEEEESSHHHHHHHHHHHHHHTCCSEEEEE---SCGGG----G---G
T ss_pred             HcCCCCcCEEEEECCCccHHHHHHHHHccCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEE---Cchhh----C---C
Confidence            3788999999999999878888888988898 799999999988877664    543222111   22221    1   1


Q ss_pred             CCCccEEEEccCCh---HHHHHHHHhhcCCCEEEEEcc
Q 018075          249 GSGIDVSFDCVGFD---KTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       249 ~~~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~~g~  283 (361)
                      ...||+|+.....+   ..++.+.+.|+|||+++....
T Consensus       186 d~~FDvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~  223 (298)
T 3fpf_A          186 GLEFDVLMVAALAEPKRRVFRNIHRYVDTETRIIYRTY  223 (298)
T ss_dssp             GCCCSEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred             CCCcCEEEECCCccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence            46899999765543   578999999999999998754

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=98.34  E-value=1.4e-06  Score=76.76  Aligned_cols=105  Identities=16%  Similarity=0.222  Sum_probs=75.4

Q ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHHHc----CC-CEEeecCCCccchhHHHH
Q 018075          169 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARNL----GA-DETAKVSTDIEDVDTDVG  242 (361)
Q Consensus       169 ~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~l----g~-~~~~~~~~~~~~~~~~~~  242 (361)
                      ..+...+++++++||-+|+|. |..++.+++..+ ...+++++.+++..+.+++.    +. +.+....   .++.+.  
T Consensus       103 ~i~~~~~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~~--  176 (277)
T 1o54_A          103 FIAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKV---RDISEG--  176 (277)
T ss_dssp             HHHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEEC---CCGGGC--
T ss_pred             HHHHHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEE---CCHHHc--
Confidence            345567889999999999887 888999999864 34899999999888777653    43 2222111   222221  


Q ss_pred             HHHhhcCCCccEEEEccCCh-HHHHHHHHhhcCCCEEEEEcc
Q 018075          243 KIQNAMGSGIDVSFDCVGFD-KTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       243 ~~~~~~~~~~d~vld~~g~~-~~~~~~~~~l~~~G~~v~~g~  283 (361)
                       +   ....+|+|+.....+ ..++.+.+.|+|+|+++....
T Consensus       177 -~---~~~~~D~V~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  214 (277)
T 1o54_A          177 -F---DEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVCP  214 (277)
T ss_dssp             -C---SCCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEES
T ss_pred             -c---cCCccCEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence             1   135799999877655 578889999999999988753

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=98.23  E-value=6.5e-06  Score=75.40  Aligned_cols=129  Identities=19%  Similarity=0.264  Sum_probs=84.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCC---C---ccchhH---------HHH
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST---D---IEDVDT---------DVG  242 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~---~---~~~~~~---------~~~  242 (361)
                      ++.+|+|+|+|.+|+.++++++.+|+ .|++.+.++++.+.++++|++.+.....   +   ...+..         ...
T Consensus       189 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~  267 (405)
T 4dio_A          189 PAAKIFVMGAGVAGLQAIATARRLGA-VVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA  267 (405)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence            67999999999999999999999999 7999999999999999999764321000   0   000110         011


Q ss_pred             HHHhhcCCCccEEEEccCChH------HHHHHHHhhcCCCEEEEEccC-CCCcce--echHhhhcCcEEEEeecC
Q 018075          243 KIQNAMGSGIDVSFDCVGFDK------TMSTALNATRPGGKVCLIGLA-KTEMTV--ALTPAAAREVDVIGIFRY  308 (361)
Q Consensus       243 ~~~~~~~~~~d~vld~~g~~~------~~~~~~~~l~~~G~~v~~g~~-~~~~~~--~~~~~~~~~~~i~~~~~~  308 (361)
                      .+.+. -.+.|+||.|+..+.      ..++.++.|++++.++.+... ++..+.  +...+..+++++.+..+.
T Consensus       268 ~l~e~-l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e~t~~~~~~~~~GV~~~gv~nl  341 (405)
T 4dio_A          268 LVAEH-IAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVERGGNIEGAEAGKVTEVGGVRIVGHLNV  341 (405)
T ss_dssp             HHHHH-HHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGGTCSBTTCCTTEEEEETTEEEEECSSG
T ss_pred             HHHHH-hcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCCCCCccccCCCCeEEECCEEEEEeCCC
Confidence            11111 247999999964331      357899999999999998742 222211  111233566777777654

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=98.18  E-value=7.2e-06  Score=72.08  Aligned_cols=105  Identities=20%  Similarity=0.239  Sum_probs=73.9

Q ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHHHc-----C--CCEEeecCCCccchhHHH
Q 018075          170 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARNL-----G--ADETAKVSTDIEDVDTDV  241 (361)
Q Consensus       170 ~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~l-----g--~~~~~~~~~~~~~~~~~~  241 (361)
                      .+....++++++||.+|+| .|..++.+++..+ ...+++++.+++..+.+++.     |  .+.+.....   +..+..
T Consensus        91 i~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~---d~~~~~  166 (280)
T 1i9g_A           91 IVHEGDIFPGARVLEAGAG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVS---DLADSE  166 (280)
T ss_dssp             HHHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECS---CGGGCC
T ss_pred             HHHHcCCCCCCEEEEEccc-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEEC---chHhcC
Confidence            4456778999999999998 5888999998753 34799999999888777653     4  222221111   221110


Q ss_pred             HHHHhhcCCCccEEEEccCCh-HHHHHHHHhhcCCCEEEEEcc
Q 018075          242 GKIQNAMGSGIDVSFDCVGFD-KTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       242 ~~~~~~~~~~~d~vld~~g~~-~~~~~~~~~l~~~G~~v~~g~  283 (361)
                        +   ....+|+|+.....+ ..+..+.+.|+++|+++.+..
T Consensus       167 --~---~~~~~D~v~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  204 (280)
T 1i9g_A          167 --L---PDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYVA  204 (280)
T ss_dssp             --C---CTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred             --C---CCCceeEEEECCcCHHHHHHHHHHhCCCCCEEEEEeC
Confidence              0   135799999876655 578899999999999998753

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=98.17  E-value=9.8e-07  Score=69.56  Aligned_cols=108  Identities=10%  Similarity=0.131  Sum_probs=75.2

Q ss_pred             hhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCCEEeecCCCccchhHHH
Q 018075          163 PLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDV  241 (361)
Q Consensus       163 ~~~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~  241 (361)
                      +.++++.+++......+.+|+|+|+|.+|.+.++.++..|++ ++..+++.++.+ ++++++.... .+    .+..+.+
T Consensus         5 ~~sv~~~a~~~~~~~~~~~v~iiG~G~iG~~~a~~l~~~g~~-v~v~~r~~~~~~~~a~~~~~~~~-~~----~~~~~~~   78 (144)
T 3oj0_A            5 KVSIPSIVYDIVRKNGGNKILLVGNGMLASEIAPYFSYPQYK-VTVAGRNIDHVRAFAEKYEYEYV-LI----NDIDSLI   78 (144)
T ss_dssp             CCSHHHHHHHHHHHHCCCEEEEECCSHHHHHHGGGCCTTTCE-EEEEESCHHHHHHHHHHHTCEEE-EC----SCHHHHH
T ss_pred             cccHHHHHHHHHHhccCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEcCCHHHHHHHHHHhCCceE-ee----cCHHHHh
Confidence            455666676654445599999999999999999988889985 888888888765 5677885322 21    1222222


Q ss_pred             HHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCC
Q 018075          242 GKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       242 ~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~  285 (361)
                              .++|+|+++++.+.... ....+++++.++.++.+.
T Consensus        79 --------~~~Divi~at~~~~~~~-~~~~l~~g~~vid~~~p~  113 (144)
T 3oj0_A           79 --------KNNDVIITATSSKTPIV-EERSLMPGKLFIDLGNPP  113 (144)
T ss_dssp             --------HTCSEEEECSCCSSCSB-CGGGCCTTCEEEECCSSC
T ss_pred             --------cCCCEEEEeCCCCCcEe-eHHHcCCCCEEEEccCCc
Confidence                    36899999998762221 226788888888876543

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=98.11  E-value=4.8e-06  Score=75.65  Aligned_cols=129  Identities=15%  Similarity=0.161  Sum_probs=84.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeec-C-CCccc---------hhHHHHHHHh
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKV-S-TDIED---------VDTDVGKIQN  246 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~-~-~~~~~---------~~~~~~~~~~  246 (361)
                      ++.+|+|+|+|.+|..++++++.+|+ .|++.+++.++.+.++++|++.+... + .....         .......+.+
T Consensus       183 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e  261 (381)
T 3p2y_A          183 KPASALVLGVGVAGLQALATAKRLGA-KTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED  261 (381)
T ss_dssp             CCCEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred             CCCEEEEECchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence            68999999999999999999999999 69999999999999999998643210 0 00000         0011111211


Q ss_pred             hcCCCccEEEEccCChH------HHHHHHHhhcCCCEEEEEccCC-CCcc--eechHhhhcCcEEEEeecC
Q 018075          247 AMGSGIDVSFDCVGFDK------TMSTALNATRPGGKVCLIGLAK-TEMT--VALTPAAAREVDVIGIFRY  308 (361)
Q Consensus       247 ~~~~~~d~vld~~g~~~------~~~~~~~~l~~~G~~v~~g~~~-~~~~--~~~~~~~~~~~~i~~~~~~  308 (361)
                       .-.++|+||.++..+.      ..+..++.|++++.++.+.... +...  -+...+..+++.+.+..+.
T Consensus       262 -~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~e~t~~~~~~~~~gV~~~~v~nl  331 (381)
T 3p2y_A          262 -AITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETGGNCELTEPGRTIVHHGVTITSPLNL  331 (381)
T ss_dssp             -HHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTCCTTCEEEETTEEEECCSCT
T ss_pred             -HHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCCCccccccCCCeEEECCEEEEeeCCC
Confidence             1258999999874331      3478999999999999987433 2211  1111133455666665544

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=97.96  E-value=1.7e-05  Score=69.20  Aligned_cols=95  Identities=19%  Similarity=0.150  Sum_probs=70.4

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      .++.+||.+|+|. |..+..+++.. |. .+++++.+++..+.+++.+....+.. .+..+..     +   ....||+|
T Consensus        84 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~-~d~~~~~-----~---~~~~fD~v  152 (269)
T 1p91_A           84 DKATAVLDIGCGE-GYYTHAFADALPEI-TTFGLDVSKVAIKAAAKRYPQVTFCV-ASSHRLP-----F---SDTSMDAI  152 (269)
T ss_dssp             TTCCEEEEETCTT-STTHHHHHHTCTTS-EEEEEESCHHHHHHHHHHCTTSEEEE-CCTTSCS-----B---CTTCEEEE
T ss_pred             CCCCEEEEECCCC-CHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHhCCCcEEEE-cchhhCC-----C---CCCceeEE
Confidence            6889999999988 99999999987 55 79999999999999888764321111 1111110     1   13579999


Q ss_pred             EEccCChHHHHHHHHhhcCCCEEEEEcc
Q 018075          256 FDCVGFDKTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       256 ld~~g~~~~~~~~~~~l~~~G~~v~~g~  283 (361)
                      +.... ...+..+.+.|+|||+++....
T Consensus       153 ~~~~~-~~~l~~~~~~L~pgG~l~~~~~  179 (269)
T 1p91_A          153 IRIYA-PCKAEELARVVKPGGWVITATP  179 (269)
T ss_dssp             EEESC-CCCHHHHHHHEEEEEEEEEEEE
T ss_pred             EEeCC-hhhHHHHHHhcCCCcEEEEEEc
Confidence            97544 4589999999999999998754

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=97.95  E-value=7.6e-05  Score=55.98  Aligned_cols=96  Identities=20%  Similarity=0.277  Sum_probs=64.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      .+.+|+|+|+|.+|..+++.+...|...|+++++++++.+.+...+..... .+-  .+. +.+.+.    -.++|+||+
T Consensus         4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~-~d~--~~~-~~~~~~----~~~~d~vi~   75 (118)
T 3ic5_A            4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQ-VDA--KDE-AGLAKA----LGGFDAVIS   75 (118)
T ss_dssp             TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEE-CCT--TCH-HHHHHH----TTTCSEEEE
T ss_pred             CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEE-ecC--CCH-HHHHHH----HcCCCEEEE
Confidence            457899999999999999999999933788999999988887766654432 111  121 223222    247999999


Q ss_pred             ccCChHHHHHHHHhhcCCCEEEEE
Q 018075          258 CVGFDKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       258 ~~g~~~~~~~~~~~l~~~G~~v~~  281 (361)
                      +++......-...+...+.+++.+
T Consensus        76 ~~~~~~~~~~~~~~~~~g~~~~~~   99 (118)
T 3ic5_A           76 AAPFFLTPIIAKAAKAAGAHYFDL   99 (118)
T ss_dssp             CSCGGGHHHHHHHHHHTTCEEECC
T ss_pred             CCCchhhHHHHHHHHHhCCCEEEe
Confidence            998664444444445566555543

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=97.93  E-value=7.2e-05  Score=68.73  Aligned_cols=103  Identities=19%  Similarity=0.284  Sum_probs=78.0

Q ss_pred             HHHHHHh--cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHH
Q 018075          167 GVHACRR--ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI  244 (361)
Q Consensus       167 a~~~l~~--~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~  244 (361)
                      .+.++.+  ...-.|++|+|+|.|.+|..+++.++.+|+ +|++++.++.+...+...|...        .++.+    +
T Consensus       206 ~~~gi~rat~~~L~GktV~ViG~G~IGk~vA~~Lra~Ga-~Viv~D~dp~ra~~A~~~G~~v--------~~Lee----a  272 (435)
T 3gvp_A          206 ILDGLKRTTDMMFGGKQVVVCGYGEVGKGCCAALKAMGS-IVYVTEIDPICALQACMDGFRL--------VKLNE----V  272 (435)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE--------CCHHH----H
T ss_pred             HHHHHHHhhCceecCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCChhhhHHHHHcCCEe--------ccHHH----H
Confidence            3455544  335689999999999999999999999999 6899999888777677777532        12222    2


Q ss_pred             HhhcCCCccEEEEccCChHHHH-HHHHhhcCCCEEEEEccCCC
Q 018075          245 QNAMGSGIDVSFDCVGFDKTMS-TALNATRPGGKVCLIGLAKT  286 (361)
Q Consensus       245 ~~~~~~~~d~vld~~g~~~~~~-~~~~~l~~~G~~v~~g~~~~  286 (361)
                          -...|+++.|.|....+. +.+..|++++.++.++....
T Consensus       273 ----l~~ADIVi~atgt~~lI~~e~l~~MK~gailINvgrg~~  311 (435)
T 3gvp_A          273 ----IRQVDIVITCTGNKNVVTREHLDRMKNSCIVCNMGHSNT  311 (435)
T ss_dssp             ----TTTCSEEEECSSCSCSBCHHHHHHSCTTEEEEECSSTTT
T ss_pred             ----HhcCCEEEECCCCcccCCHHHHHhcCCCcEEEEecCCCc
Confidence                247899999988664454 78999999999988876543

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=97.89  E-value=0.0002  Score=59.75  Aligned_cols=104  Identities=14%  Similarity=0.116  Sum_probs=73.0

Q ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCC-EEeecCCCccchhHHHHH
Q 018075          169 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGAD-ETAKVSTDIEDVDTDVGK  243 (361)
Q Consensus       169 ~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~~~~  243 (361)
                      ..+....++++++||-+|||. |..++.+++. +. .|++++.+++..+.+++    +|.. .+.....   +..+.+. 
T Consensus        46 ~~l~~l~~~~~~~vLDlGcG~-G~~~~~la~~-~~-~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~---d~~~~~~-  118 (204)
T 3njr_A           46 LTLAALAPRRGELLWDIGGGS-GSVSVEWCLA-GG-RAITIEPRADRIENIQKNIDTYGLSPRMRAVQG---TAPAALA-  118 (204)
T ss_dssp             HHHHHHCCCTTCEEEEETCTT-CHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES---CTTGGGT-
T ss_pred             HHHHhcCCCCCCEEEEecCCC-CHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeC---chhhhcc-
Confidence            345567789999999999987 8888999988 66 79999999998777655    4544 2222112   2222111 


Q ss_pred             HHhhcCCCccEEEEccCChH-HHHHHHHhhcCCCEEEEEcc
Q 018075          244 IQNAMGSGIDVSFDCVGFDK-TMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       244 ~~~~~~~~~d~vld~~g~~~-~~~~~~~~l~~~G~~v~~g~  283 (361)
                          ....+|+|+...+... .++.+.+.|+|+|+++....
T Consensus       119 ----~~~~~D~v~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  155 (204)
T 3njr_A          119 ----DLPLPEAVFIGGGGSQALYDRLWEWLAPGTRIVANAV  155 (204)
T ss_dssp             ----TSCCCSEEEECSCCCHHHHHHHHHHSCTTCEEEEEEC
T ss_pred             ----cCCCCCEEEECCcccHHHHHHHHHhcCCCcEEEEEec
Confidence                1246999997654332 78889999999999987643

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=97.89  E-value=3.4e-05  Score=69.72  Aligned_cols=108  Identities=19%  Similarity=0.228  Sum_probs=70.8

Q ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEeCChhHHHHHHHcCC---------------CEEeecCC
Q 018075          169 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARNLGA---------------DETAKVST  232 (361)
Q Consensus       169 ~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~lg~---------------~~~~~~~~  232 (361)
                      ..+....+++|++||-+|+|. |..++.+++..|. ..|++++.+++..+.+++...               ..+.....
T Consensus        96 ~~l~~l~~~~g~~VLDiG~G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~  174 (336)
T 2b25_A           96 MILSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHK  174 (336)
T ss_dssp             HHHHHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEES
T ss_pred             HHHHhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEEC
Confidence            344556789999999999887 8888889988764 479999999988777765211               11111111


Q ss_pred             CccchhHHHHHHHhhcCCCccEEEEccCCh-HHHHHHHHhhcCCCEEEEEcc
Q 018075          233 DIEDVDTDVGKIQNAMGSGIDVSFDCVGFD-KTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~~l~~~G~~v~~g~  283 (361)
                         +..+....+   ....||+|+-....+ ..+..+.+.|+|||+++.+..
T Consensus       175 ---d~~~~~~~~---~~~~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  220 (336)
T 2b25_A          175 ---DISGATEDI---KSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVV  220 (336)
T ss_dssp             ---CTTCCC----------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred             ---ChHHccccc---CCCCeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence               211111111   124699998765544 358889999999999997654

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.85  E-value=5e-05  Score=60.40  Aligned_cols=91  Identities=13%  Similarity=0.133  Sum_probs=62.5

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHH-HcCCCEEeecCCCccchhHHHHHHHhhcCCCcc
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGADETAKVSTDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      ...++++|+|+|+|.+|..+++.++..|. .|+++++++++.+.++ +.|...+ ..+.  .+. +.+.   .....++|
T Consensus        15 ~~~~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~g~~~~-~~d~--~~~-~~l~---~~~~~~ad   86 (155)
T 2g1u_A           15 KKQKSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNSEFSGFTV-VGDA--AEF-ETLK---ECGMEKAD   86 (155)
T ss_dssp             --CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCTTCCSEEE-ESCT--TSH-HHHH---TTTGGGCS
T ss_pred             cccCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHhcCCCcEE-EecC--CCH-HHHH---HcCcccCC
Confidence            45678999999999999999999999998 7889999988887766 5665432 2111  121 1222   11235799


Q ss_pred             EEEEccCChHHHHHHHHhhc
Q 018075          254 VSFDCVGFDKTMSTALNATR  273 (361)
Q Consensus       254 ~vld~~g~~~~~~~~~~~l~  273 (361)
                      +||.+++.+.....+...++
T Consensus        87 ~Vi~~~~~~~~~~~~~~~~~  106 (155)
T 2g1u_A           87 MVFAFTNDDSTNFFISMNAR  106 (155)
T ss_dssp             EEEECSSCHHHHHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHH
Confidence            99999998755555545444

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.84  E-value=0.00018  Score=63.63  Aligned_cols=111  Identities=14%  Similarity=0.181  Sum_probs=78.5

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  256 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  256 (361)
                      -+|.+|+|+|+|.+|..+++.++..|+ .|++.+++.++.+.++++|+... ..    .+    +.++    -.+.|+|+
T Consensus       153 l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-~~----~~----l~~~----l~~aDvVi  218 (293)
T 3d4o_A          153 IHGANVAVLGLGRVGMSVARKFAALGA-KVKVGARESDLLARIAEMGMEPF-HI----SK----AAQE----LRDVDVCI  218 (293)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTSEEE-EG----GG----HHHH----TTTCSEEE
T ss_pred             CCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHCCCeec-Ch----hh----HHHH----hcCCCEEE
Confidence            478999999999999999999999999 78999998888777777886532 11    12    2222    24799999


Q ss_pred             EccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEE
Q 018075          257 DCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVI  303 (361)
Q Consensus       257 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~  303 (361)
                      .+++..-.-...+..+++++.++.++.......+  ......+..+.
T Consensus       219 ~~~p~~~i~~~~l~~mk~~~~lin~ar~~~~~~~--~~a~~~Gv~~~  263 (293)
T 3d4o_A          219 NTIPALVVTANVLAEMPSHTFVIDLASKPGGTDF--RYAEKRGIKAL  263 (293)
T ss_dssp             ECCSSCCBCHHHHHHSCTTCEEEECSSTTCSBCH--HHHHHHTCEEE
T ss_pred             ECCChHHhCHHHHHhcCCCCEEEEecCCCCCCCH--HHHHHCCCEEE
Confidence            9987542234577889999999988764433322  33333444444

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=97.81  E-value=0.00025  Score=58.88  Aligned_cols=105  Identities=14%  Similarity=0.154  Sum_probs=73.9

Q ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHH
Q 018075          170 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       170 ~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~  245 (361)
                      .+....++++++||-+|||. |..++.+++......+++++.+++..+.+++    .+.+.+.....   +..+...   
T Consensus        32 ~l~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~---d~~~~~~---  104 (204)
T 3e05_A           32 TLSKLRLQDDLVMWDIGAGS-ASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEA---FAPEGLD---  104 (204)
T ss_dssp             HHHHTTCCTTCEEEEETCTT-CHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEEC---CTTTTCT---
T ss_pred             HHHHcCCCCCCEEEEECCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeC---Chhhhhh---
Confidence            45567889999999999986 8899999998655589999999998877765    34432211111   1111111   


Q ss_pred             hhcCCCccEEEEccC---ChHHHHHHHHhhcCCCEEEEEcc
Q 018075          246 NAMGSGIDVSFDCVG---FDKTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       246 ~~~~~~~d~vld~~g---~~~~~~~~~~~l~~~G~~v~~g~  283 (361)
                        ....+|+|+....   ....++.+.+.|+|+|+++....
T Consensus       105 --~~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  143 (204)
T 3e05_A          105 --DLPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAV  143 (204)
T ss_dssp             --TSCCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred             --cCCCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEec
Confidence              1256999998764   23578889999999999998643

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=97.67  E-value=0.00011  Score=61.36  Aligned_cols=102  Identities=15%  Similarity=0.104  Sum_probs=71.2

Q ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHH
Q 018075          170 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       170 ~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~  245 (361)
                      .++...++++++||-+|+|. |..+..+++. +. .|++++.+++..+.+++    .+...+....   .+..+...   
T Consensus        69 ~~~~l~~~~~~~vLdiG~G~-G~~~~~la~~-~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~---~d~~~~~~---  139 (210)
T 3lbf_A           69 MTELLELTPQSRVLEIGTGS-GYQTAILAHL-VQ-HVCSVERIKGLQWQARRRLKNLDLHNVSTRH---GDGWQGWQ---  139 (210)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHH-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEE---SCGGGCCG---
T ss_pred             HHHhcCCCCCCEEEEEcCCC-CHHHHHHHHh-CC-EEEEEecCHHHHHHHHHHHHHcCCCceEEEE---CCcccCCc---
Confidence            34557789999999999885 8888888888 65 79999999988877765    3433221111   12211110   


Q ss_pred             hhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEc
Q 018075          246 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       246 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g  282 (361)
                        ....||+|+.+.......+.+.+.|+|||+++..-
T Consensus       140 --~~~~~D~i~~~~~~~~~~~~~~~~L~pgG~lv~~~  174 (210)
T 3lbf_A          140 --ARAPFDAIIVTAAPPEIPTALMTQLDEGGILVLPV  174 (210)
T ss_dssp             --GGCCEEEEEESSBCSSCCTHHHHTEEEEEEEEEEE
T ss_pred             --cCCCccEEEEccchhhhhHHHHHhcccCcEEEEEE
Confidence              13579999997655545567889999999998753

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.65  E-value=0.00026  Score=62.87  Aligned_cols=111  Identities=14%  Similarity=0.172  Sum_probs=78.2

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  256 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  256 (361)
                      -+|.+++|+|+|.+|..+++.++.+|+ .|++.+++.++.+.+.++|... +.+    .+    +.++    -.+.|+|+
T Consensus       155 l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~-~~~----~~----l~~~----l~~aDvVi  220 (300)
T 2rir_A          155 IHGSQVAVLGLGRTGMTIARTFAALGA-NVKVGARSSAHLARITEMGLVP-FHT----DE----LKEH----VKDIDICI  220 (300)
T ss_dssp             STTSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCEE-EEG----GG----HHHH----STTCSEEE
T ss_pred             CCCCEEEEEcccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCeE-Ech----hh----HHHH----hhCCCEEE
Confidence            478999999999999999999999999 7899999888877677777642 111    12    2222    25799999


Q ss_pred             EccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEE
Q 018075          257 DCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVI  303 (361)
Q Consensus       257 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~  303 (361)
                      .+++..-.-...+..+++++.++.++.......+  ......+..+.
T Consensus       221 ~~~p~~~i~~~~~~~mk~g~~lin~a~g~~~~~~--~~a~~~G~~~i  265 (300)
T 2rir_A          221 NTIPSMILNQTVLSSMTPKTLILDLASRPGGTDF--KYAEKQGIKAL  265 (300)
T ss_dssp             ECCSSCCBCHHHHTTSCTTCEEEECSSTTCSBCH--HHHHHHTCEEE
T ss_pred             ECCChhhhCHHHHHhCCCCCEEEEEeCCCCCcCH--HHHHHCCCEEE
Confidence            9988542224577889999999988865443332  33333444443

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=97.65  E-value=9.5e-05  Score=63.09  Aligned_cols=104  Identities=17%  Similarity=0.208  Sum_probs=72.6

Q ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHH
Q 018075          169 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKI  244 (361)
Q Consensus       169 ~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~  244 (361)
                      ..++...++++++||.+|+| .|..++.+++..+ ..|++++.+++..+.+++    .+...+....   .+....   +
T Consensus        82 ~~~~~l~~~~~~~vLdiG~G-~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~---~d~~~~---~  153 (235)
T 1jg1_A           82 IMLEIANLKPGMNILEVGTG-SGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVIL---GDGSKG---F  153 (235)
T ss_dssp             HHHHHHTCCTTCCEEEECCT-TSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEE---SCGGGC---C
T ss_pred             HHHHhcCCCCCCEEEEEeCC-cCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEE---CCcccC---C
Confidence            34455678999999999998 5999999999887 479999999988777665    3443321111   121111   1


Q ss_pred             HhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEc
Q 018075          245 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       245 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      .  ...+||+|+.+.......+.+.+.|++||+++..-
T Consensus       154 ~--~~~~fD~Ii~~~~~~~~~~~~~~~L~pgG~lvi~~  189 (235)
T 1jg1_A          154 P--PKAPYDVIIVTAGAPKIPEPLIEQLKIGGKLIIPV  189 (235)
T ss_dssp             G--GGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             C--CCCCccEEEECCcHHHHHHHHHHhcCCCcEEEEEE
Confidence            1  12459999987665545678899999999998753

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=97.64  E-value=0.00039  Score=56.16  Aligned_cols=104  Identities=15%  Similarity=0.221  Sum_probs=73.0

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCC-EEeecCCCccchhHHHHHHH
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGAD-ETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~~~~~~  245 (361)
                      +....++++++||.+|+|. |..++.+++..+...+++++.+++..+.+++    .+.. .+ .+..   +..+.   +.
T Consensus        18 ~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~---d~~~~---~~   89 (178)
T 3hm2_A           18 ISALAPKPHETLWDIGGGS-GSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQ---GAPRA---FD   89 (178)
T ss_dssp             HHHHCCCTTEEEEEESTTT-THHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEEC---CTTGG---GG
T ss_pred             HHHhcccCCCeEEEeCCCC-CHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEec---chHhh---hh
Confidence            4556788999999999986 8899999988754489999999988877765    3543 33 2222   11111   11


Q ss_pred             hhcCCCccEEEEccCCh--HHHHHHHHhhcCCCEEEEEcc
Q 018075          246 NAMGSGIDVSFDCVGFD--KTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       246 ~~~~~~~d~vld~~g~~--~~~~~~~~~l~~~G~~v~~g~  283 (361)
                      . ....+|+|+......  ..++.+.+.|+|+|+++....
T Consensus        90 ~-~~~~~D~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  128 (178)
T 3hm2_A           90 D-VPDNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLVANAV  128 (178)
T ss_dssp             G-CCSCCSEEEECC-TTCTTHHHHHHHTCCTTCEEEEEEC
T ss_pred             c-cCCCCCEEEECCcccHHHHHHHHHHhcCCCCEEEEEee
Confidence            1 126799999755433  378999999999999987654

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.59  E-value=0.00086  Score=52.12  Aligned_cols=96  Identities=11%  Similarity=0.045  Sum_probs=68.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      -.++++|.|+|.+|...++.++..|. .|++++.++++.+.+++.|...+. .+....   +.+++   .+-.++|+++-
T Consensus         6 ~~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~~g~~~i~-gd~~~~---~~l~~---a~i~~ad~vi~   77 (140)
T 3fwz_A            6 ICNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRTRVDELRERGVRAVL-GNAANE---EIMQL---AHLECAKWLIL   77 (140)
T ss_dssp             CCSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEEE-SCTTSH---HHHHH---TTGGGCSEEEE
T ss_pred             CCCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHcCCCEEE-CCCCCH---HHHHh---cCcccCCEEEE
Confidence            35789999999999999999999999 689999999999998888876433 122111   22222   23357999999


Q ss_pred             ccCChHHHH---HHHHhhcCCCEEEEE
Q 018075          258 CVGFDKTMS---TALNATRPGGKVCLI  281 (361)
Q Consensus       258 ~~g~~~~~~---~~~~~l~~~G~~v~~  281 (361)
                      +++.+....   ...+.+.+..+++.-
T Consensus        78 ~~~~~~~n~~~~~~a~~~~~~~~iiar  104 (140)
T 3fwz_A           78 TIPNGYEAGEIVASARAKNPDIEIIAR  104 (140)
T ss_dssp             CCSCHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred             ECCChHHHHHHHHHHHHHCCCCeEEEE
Confidence            999764222   345666777776653

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=97.58  E-value=0.00067  Score=62.49  Aligned_cols=102  Identities=21%  Similarity=0.183  Sum_probs=76.0

Q ss_pred             HHHHHHh--cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHH
Q 018075          167 GVHACRR--ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI  244 (361)
Q Consensus       167 a~~~l~~--~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~  244 (361)
                      .+.++.+  ...-.|++|+|+|.|.+|..+++.++.+|+ +|++++.++.+...+...|....        ++.+    +
T Consensus       233 lvdgI~Ratg~~L~GKTVgVIG~G~IGr~vA~~lrafGa-~Viv~d~dp~~a~~A~~~G~~vv--------~LeE----l  299 (464)
T 3n58_A          233 LVDGIRRGTDVMMAGKVAVVCGYGDVGKGSAQSLAGAGA-RVKVTEVDPICALQAAMDGFEVV--------TLDD----A  299 (464)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCEEC--------CHHH----H
T ss_pred             HHHHHHHhcCCcccCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCcchhhHHHhcCceec--------cHHH----H
Confidence            3444443  345689999999999999999999999999 78999888877666666675321        2222    2


Q ss_pred             HhhcCCCccEEEEccCChHHH-HHHHHhhcCCCEEEEEccCC
Q 018075          245 QNAMGSGIDVSFDCVGFDKTM-STALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       245 ~~~~~~~~d~vld~~g~~~~~-~~~~~~l~~~G~~v~~g~~~  285 (361)
                      .    ...|+|+.+.+....+ .+.+..|++++.++-+|...
T Consensus       300 L----~~ADIVv~atgt~~lI~~e~l~~MK~GAILINvGRgd  337 (464)
T 3n58_A          300 A----STADIVVTTTGNKDVITIDHMRKMKDMCIVGNIGHFD  337 (464)
T ss_dssp             G----GGCSEEEECCSSSSSBCHHHHHHSCTTEEEEECSSST
T ss_pred             H----hhCCEEEECCCCccccCHHHHhcCCCCeEEEEcCCCC
Confidence            1    3689999998866333 67889999999998887654

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=97.56  E-value=0.00034  Score=60.32  Aligned_cols=104  Identities=17%  Similarity=0.139  Sum_probs=74.8

Q ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHHHc-----CCCEEeecCCCccchhHHHHH
Q 018075          170 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARNL-----GADETAKVSTDIEDVDTDVGK  243 (361)
Q Consensus       170 ~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~l-----g~~~~~~~~~~~~~~~~~~~~  243 (361)
                      .+....++++++||.+|+|. |..++.+++..+ ...+++++.+++..+.+++.     |.+.+....   .+..+.  .
T Consensus        88 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~---~d~~~~--~  161 (258)
T 2pwy_A           88 MVTLLDLAPGMRVLEAGTGS-GGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHL---GKLEEA--E  161 (258)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEE---SCGGGC--C
T ss_pred             HHHHcCCCCCCEEEEECCCc-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEE---Cchhhc--C
Confidence            45557789999999999986 889999999864 34899999999988877764     533222111   122111  0


Q ss_pred             HHhhcCCCccEEEEccCCh-HHHHHHHHhhcCCCEEEEEc
Q 018075          244 IQNAMGSGIDVSFDCVGFD-KTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       244 ~~~~~~~~~d~vld~~g~~-~~~~~~~~~l~~~G~~v~~g  282 (361)
                      +   ....+|+|+.....+ ..++.+.+.|+++|+++.+.
T Consensus       162 ~---~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~  198 (258)
T 2pwy_A          162 L---EEAAYDGVALDLMEPWKVLEKAALALKPDRFLVAYL  198 (258)
T ss_dssp             C---CTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             C---CCCCcCEEEECCcCHHHHHHHHHHhCCCCCEEEEEe
Confidence            1   135799999876655 57899999999999999875

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=97.55  E-value=0.00021  Score=59.93  Aligned_cols=105  Identities=16%  Similarity=0.195  Sum_probs=72.7

Q ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEeCChhHHHHHHHc----CCCEEeecCCCccchhHHHHH
Q 018075          169 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGK  243 (361)
Q Consensus       169 ~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~  243 (361)
                      ..++...++++++||.+|+|. |..+..+++..|. ..+++++.+++..+.+++.    +...+....   .+.....  
T Consensus        68 ~~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~---~d~~~~~--  141 (215)
T 2yxe_A           68 MMCELLDLKPGMKVLEIGTGC-GYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIV---GDGTLGY--  141 (215)
T ss_dssp             HHHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEE---SCGGGCC--
T ss_pred             HHHHhhCCCCCCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEE---CCcccCC--
Confidence            344556789999999999985 8899999998862 3799999999887777653    433221111   1211111  


Q ss_pred             HHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEc
Q 018075          244 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       244 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g  282 (361)
                       .  ....+|+|+.+.......+.+.+.|+|+|+++..-
T Consensus       142 -~--~~~~fD~v~~~~~~~~~~~~~~~~L~pgG~lv~~~  177 (215)
T 2yxe_A          142 -E--PLAPYDRIYTTAAGPKIPEPLIRQLKDGGKLLMPV  177 (215)
T ss_dssp             -G--GGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             -C--CCCCeeEEEECCchHHHHHHHHHHcCCCcEEEEEE
Confidence             0  13579999987665545578889999999998764

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=97.55  E-value=0.00014  Score=60.49  Aligned_cols=136  Identities=15%  Similarity=0.236  Sum_probs=81.0

Q ss_pred             CceeEEEE-ecCCceEECCCCCCcccccccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeC
Q 018075          133 GSLAHKVV-HPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDV  211 (361)
Q Consensus       133 g~~~~~~~-~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~  211 (361)
                      ..|.+|.. .+....+.+++++++..+.. .........+.. .++++++||-+|||. |..+..+++ .+...+++++.
T Consensus        16 p~w~~~~~~~~~~~~~~~~~~~~f~~~~~-~~~~~~~~~l~~-~~~~~~~vLDiG~G~-G~~~~~l~~-~~~~~v~~vD~   91 (205)
T 3grz_A           16 PEWEDYQPVFKDQEIIRLDPGLAFGTGNH-QTTQLAMLGIER-AMVKPLTVADVGTGS-GILAIAAHK-LGAKSVLATDI   91 (205)
T ss_dssp             ETTCCCCCSSTTCEEEEESCC-----CCH-HHHHHHHHHHHH-HCSSCCEEEEETCTT-SHHHHHHHH-TTCSEEEEEES
T ss_pred             ccccccccCCCCceeEEecCCcccCCCCC-ccHHHHHHHHHH-hccCCCEEEEECCCC-CHHHHHHHH-CCCCEEEEEEC
Confidence            34566666 66777888888877655431 111112222222 257899999999887 777777776 46658999999


Q ss_pred             ChhHHHHHHHc----CCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccCCh---HHHHHHHHhhcCCCEEEEEc
Q 018075          212 DVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD---KTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       212 ~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~~g  282 (361)
                      +++..+.+++.    +...+.....   +..+.       ....+|+|+......   ..++.+.+.|+++|+++...
T Consensus        92 s~~~~~~a~~~~~~~~~~~v~~~~~---d~~~~-------~~~~fD~i~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~  159 (205)
T 3grz_A           92 SDESMTAAEENAALNGIYDIALQKT---SLLAD-------VDGKFDLIVANILAEILLDLIPQLDSHLNEDGQVIFSG  159 (205)
T ss_dssp             CHHHHHHHHHHHHHTTCCCCEEEES---STTTT-------CCSCEEEEEEESCHHHHHHHGGGSGGGEEEEEEEEEEE
T ss_pred             CHHHHHHHHHHHHHcCCCceEEEec---ccccc-------CCCCceEEEECCcHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence            99887777653    4332111111   22111       146799999865533   12444556789999998854

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.54  E-value=0.00051  Score=56.06  Aligned_cols=96  Identities=18%  Similarity=0.176  Sum_probs=67.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhh-cCCCccEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNA-MGSGIDVS  255 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~v  255 (361)
                      .+++|+|+|+|.+|..+++.++.. |. .|++++.++++.+.+++.|...+.. +..  +. +.+.   +. +-.++|+|
T Consensus        38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~~g~~~~~g-d~~--~~-~~l~---~~~~~~~ad~v  109 (183)
T 3c85_A           38 GHAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREEAAQQHRSEGRNVISG-DAT--DP-DFWE---RILDTGHVKLV  109 (183)
T ss_dssp             TTCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHHTTCCEEEC-CTT--CH-HHHH---TBCSCCCCCEE
T ss_pred             CCCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHHCCCCEEEc-CCC--CH-HHHH---hccCCCCCCEE
Confidence            367899999999999999999998 98 5889999999998888888764431 111  11 1121   22 24579999


Q ss_pred             EEccCChHHHHHH---HHhhcCCCEEEEE
Q 018075          256 FDCVGFDKTMSTA---LNATRPGGKVCLI  281 (361)
Q Consensus       256 ld~~g~~~~~~~~---~~~l~~~G~~v~~  281 (361)
                      +.+++.......+   .+.+.+..+++..
T Consensus       110 i~~~~~~~~~~~~~~~~~~~~~~~~ii~~  138 (183)
T 3c85_A          110 LLAMPHHQGNQTALEQLQRRNYKGQIAAI  138 (183)
T ss_dssp             EECCSSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred             EEeCCChHHHHHHHHHHHHHCCCCEEEEE
Confidence            9999976443333   3445556666653

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=97.50  E-value=0.00079  Score=58.63  Aligned_cols=106  Identities=25%  Similarity=0.311  Sum_probs=72.6

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCCEE-eecC-CCccchhHHHHHHHhhcCCCc
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADET-AKVS-TDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      -+|+.+||.| ++++|.+.++.+...|+ .|+.+++++++.+ .++++|.... +..+ .+..+..+.+.++.+.. +++
T Consensus        27 L~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-G~i  104 (273)
T 4fgs_A           27 LNAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEA-GRI  104 (273)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH-SCE
T ss_pred             hCCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence            4688999998 58999999999999999 6888888888765 4566774322 2111 23334444444444322 479


Q ss_pred             cEEEEccCCh----------H---------------HHHHHHHhhcCCCEEEEEccC
Q 018075          253 DVSFDCVGFD----------K---------------TMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       253 d~vld~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      |+++++.|..          +               ..+..++.|+.+|+++.++..
T Consensus       105 DiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~  161 (273)
T 4fgs_A          105 DVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGST  161 (273)
T ss_dssp             EEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCG
T ss_pred             CEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeeh
Confidence            9999998754          1               344455667888999988743

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.47  E-value=0.00029  Score=65.90  Aligned_cols=91  Identities=21%  Similarity=0.262  Sum_probs=71.3

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  256 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  256 (361)
                      -.|++++|.|+|++|.+.++.++..|+ .|++++.++.+...+...+++. .       +..+    .    ...+|+++
T Consensus       263 L~GKtVvVtGaGgIG~aiA~~Laa~GA-~Viv~D~~~~~a~~Aa~~g~dv-~-------~lee----~----~~~aDvVi  325 (488)
T 3ond_A          263 IAGKVAVVAGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQATMEGLQV-L-------TLED----V----VSEADIFV  325 (488)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE-C-------CGGG----T----TTTCSEEE
T ss_pred             ccCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHhCCcc-C-------CHHH----H----HHhcCEEE
Confidence            579999999999999999999999999 7888999988877777777532 1       1111    1    34799999


Q ss_pred             EccCChHHH-HHHHHhhcCCCEEEEEccC
Q 018075          257 DCVGFDKTM-STALNATRPGGKVCLIGLA  284 (361)
Q Consensus       257 d~~g~~~~~-~~~~~~l~~~G~~v~~g~~  284 (361)
                      ++.|....+ ...++.+++++.++.+|..
T Consensus       326 ~atG~~~vl~~e~l~~mk~gaiVvNaG~~  354 (488)
T 3ond_A          326 TTTGNKDIIMLDHMKKMKNNAIVCNIGHF  354 (488)
T ss_dssp             ECSSCSCSBCHHHHTTSCTTEEEEESSST
T ss_pred             eCCCChhhhhHHHHHhcCCCeEEEEcCCC
Confidence            999866544 3478899999999888754

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=97.44  E-value=0.0004  Score=56.62  Aligned_cols=102  Identities=19%  Similarity=0.255  Sum_probs=67.4

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhhc
Q 018075          173 RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       173 ~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      ...+++|++||-+|||. |..++.+++. +. .|+++|.+++..+.+++    .+.+.+.....+..++       ....
T Consensus        17 ~~~~~~~~~vLDiGcG~-G~~~~~la~~-~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l-------~~~~   86 (185)
T 3mti_A           17 AEVLDDESIVVDATMGN-GNDTAFLAGL-SK-KVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENL-------DHYV   86 (185)
T ss_dssp             HTTCCTTCEEEESCCTT-SHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGG-------GGTC
T ss_pred             HHhCCCCCEEEEEcCCC-CHHHHHHHHh-CC-EEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHH-------Hhhc
Confidence            44678999999999886 8888888887 66 79999999988776655    3433222111111111       1112


Q ss_pred             CCCccEEEEccCC-----------h----HHHHHHHHhhcCCCEEEEEccC
Q 018075          249 GSGIDVSFDCVGF-----------D----KTMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       249 ~~~~d~vld~~g~-----------~----~~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      +..||+|+-+.+.           +    ..++.+.+.|+|||+++.+...
T Consensus        87 ~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~  137 (185)
T 3mti_A           87 REPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY  137 (185)
T ss_dssp             CSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred             cCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence            4579999866321           1    2457788999999999887543

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=97.43  E-value=0.00031  Score=59.61  Aligned_cols=105  Identities=13%  Similarity=0.098  Sum_probs=71.5

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEeCChhHHHHHHHcCC--CEEeecCCCccchhHHHHHHHhh
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARNLGA--DETAKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~lg~--~~~~~~~~~~~~~~~~~~~~~~~  247 (361)
                      +....++||++||=+|||+ |..+..+|+..|- .+|++++.+++..+.+++.-.  ..+..+..+..+....     ..
T Consensus        70 l~~l~ikpG~~VldlG~G~-G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~-----~~  143 (233)
T 4df3_A           70 LIELPVKEGDRILYLGIAS-GTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKY-----RH  143 (233)
T ss_dssp             CSCCCCCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGG-----TT
T ss_pred             hhhcCCCCCCEEEEecCcC-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCcccc-----cc
Confidence            4557899999999999988 8899999999874 379999999998877665422  1222211211121111     01


Q ss_pred             cCCCccEEEEccCCh----HHHHHHHHhhcCCCEEEEE
Q 018075          248 MGSGIDVSFDCVGFD----KTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       248 ~~~~~d~vld~~g~~----~~~~~~~~~l~~~G~~v~~  281 (361)
                      ....+|+||.....+    ..+..+.+.|+|||++++.
T Consensus       144 ~~~~vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~  181 (233)
T 4df3_A          144 LVEGVDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMA  181 (233)
T ss_dssp             TCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ccceEEEEEEeccCChhHHHHHHHHHHhccCCCEEEEE
Confidence            235699988755544    2567778899999999875

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=97.39  E-value=0.0011  Score=59.08  Aligned_cols=101  Identities=13%  Similarity=0.240  Sum_probs=71.7

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc----CCCEEeecCCCccchhHHHHHHHhh
Q 018075          172 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       172 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~  247 (361)
                      +...++++++||-+|||. |..+..+++..|+ .|++++.+++..+.+++.    |...-+.+..  .+..+    +   
T Consensus        84 ~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~--~d~~~----~---  152 (318)
T 2fk8_A           84 DKLDLKPGMTLLDIGCGW-GTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLL--QGWED----F---  152 (318)
T ss_dssp             TTSCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEE--SCGGG----C---
T ss_pred             HhcCCCCcCEEEEEcccc-hHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE--CChHH----C---
Confidence            446788999999999987 8888899988788 799999999988777664    3221111111  12211    1   


Q ss_pred             cCCCccEEEEc-----cCC---hHHHHHHHHhhcCCCEEEEEccC
Q 018075          248 MGSGIDVSFDC-----VGF---DKTMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       248 ~~~~~d~vld~-----~g~---~~~~~~~~~~l~~~G~~v~~g~~  284 (361)
                       +..||+|+..     .+.   ...++.+.+.|+|||+++.....
T Consensus       153 -~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~  196 (318)
T 2fk8_A          153 -AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSV  196 (318)
T ss_dssp             -CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred             -CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence             3579999976     332   34678888999999999986543

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=97.37  E-value=0.001  Score=57.25  Aligned_cols=103  Identities=20%  Similarity=0.279  Sum_probs=74.6

Q ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHHHc----CCCE-EeecCCCccchhHHHHH
Q 018075          170 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARNL----GADE-TAKVSTDIEDVDTDVGK  243 (361)
Q Consensus       170 ~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~l----g~~~-~~~~~~~~~~~~~~~~~  243 (361)
                      .+...+++++++||-+|+|. |..++.+++..+ ...+++++.+++..+.+++.    |... +....   .++.+.   
T Consensus        85 i~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~~---  157 (255)
T 3mb5_A           85 IVAYAGISPGDFIVEAGVGS-GALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKL---KDIYEG---  157 (255)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEEC---SCGGGC---
T ss_pred             HHHhhCCCCCCEEEEecCCc-hHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEE---Cchhhc---
Confidence            34567889999999999987 889999999853 44899999999887777653    5432 22211   222211   


Q ss_pred             HHhhcCCCccEEEEccCCh-HHHHHHHHhhcCCCEEEEEc
Q 018075          244 IQNAMGSGIDVSFDCVGFD-KTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       244 ~~~~~~~~~d~vld~~g~~-~~~~~~~~~l~~~G~~v~~g  282 (361)
                      +   ....+|+|+.....+ ..++.+.+.|+|+|+++.+.
T Consensus       158 ~---~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~  194 (255)
T 3mb5_A          158 I---EEENVDHVILDLPQPERVVEHAAKALKPGGFFVAYT  194 (255)
T ss_dssp             C---CCCSEEEEEECSSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             c---CCCCcCEEEECCCCHHHHHHHHHHHcCCCCEEEEEE
Confidence            1   245699999877655 37899999999999998864

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=97.36  E-value=0.0016  Score=60.06  Aligned_cols=100  Identities=24%  Similarity=0.306  Sum_probs=73.7

Q ss_pred             HHHHHh--cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHH
Q 018075          168 VHACRR--ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       168 ~~~l~~--~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~  245 (361)
                      +.++.+  ...-.|.+|+|+|.|.+|...++.++.+|+ .|++++.++.+...+...|....        ++.+    + 
T Consensus       198 ldgi~ratg~~L~GktVgIiG~G~IG~~vA~~Lka~Ga-~Viv~D~~p~~a~~A~~~G~~~~--------sL~e----a-  263 (436)
T 3h9u_A          198 VDGIKRATDVMIAGKTACVCGYGDVGKGCAAALRGFGA-RVVVTEVDPINALQAAMEGYQVL--------LVED----V-  263 (436)
T ss_dssp             HHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC--------CHHH----H-
T ss_pred             HHHHHHhcCCcccCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCChhhhHHHHHhCCeec--------CHHH----H-
Confidence            444433  334479999999999999999999999999 68999998888777777776421        2222    2 


Q ss_pred             hhcCCCccEEEEccCChHHHH-HHHHhhcCCCEEEEEccC
Q 018075          246 NAMGSGIDVSFDCVGFDKTMS-TALNATRPGGKVCLIGLA  284 (361)
Q Consensus       246 ~~~~~~~d~vld~~g~~~~~~-~~~~~l~~~G~~v~~g~~  284 (361)
                         -...|+++.+.+....+. ..+..|++++.++.++..
T Consensus       264 ---l~~ADVVilt~gt~~iI~~e~l~~MK~gAIVINvgRg  300 (436)
T 3h9u_A          264 ---VEEAHIFVTTTGNDDIITSEHFPRMRDDAIVCNIGHF  300 (436)
T ss_dssp             ---TTTCSEEEECSSCSCSBCTTTGGGCCTTEEEEECSSS
T ss_pred             ---HhhCCEEEECCCCcCccCHHHHhhcCCCcEEEEeCCC
Confidence               246999999887653333 678889999988777643

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=97.34  E-value=0.00064  Score=60.79  Aligned_cols=104  Identities=22%  Similarity=0.247  Sum_probs=71.6

Q ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEeCChhHHHHHHHc----CCCEEeecCCCccchhHHHHHH
Q 018075          170 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKI  244 (361)
Q Consensus       170 ~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~  244 (361)
                      .++...++++++||-+|||. |..++.+++..+. ..|++++.+++..+.+++.    |...+....   .+..+...  
T Consensus        67 l~~~l~~~~~~~VLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~---~d~~~~~~--  140 (317)
T 1dl5_A           67 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVC---GDGYYGVP--  140 (317)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEE---SCGGGCCG--
T ss_pred             HHHhcCCCCcCEEEEecCCc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEE---CChhhccc--
Confidence            34557789999999999887 8888888887652 4699999999887777653    543322111   12211111  


Q ss_pred             HhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEc
Q 018075          245 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       245 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g  282 (361)
                         ....+|+|+.........+.+.+.|+|||+++..-
T Consensus       141 ---~~~~fD~Iv~~~~~~~~~~~~~~~LkpgG~lvi~~  175 (317)
T 1dl5_A          141 ---EFSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVPI  175 (317)
T ss_dssp             ---GGCCEEEEEECSBBSCCCHHHHHHEEEEEEEEEEB
T ss_pred             ---cCCCeEEEEEcCCHHHHHHHHHHhcCCCcEEEEEE
Confidence               13579999987654434577889999999998763

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=97.32  E-value=0.00084  Score=55.16  Aligned_cols=102  Identities=18%  Similarity=0.191  Sum_probs=63.5

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCC---------CEEEEEeCChhHHHHHHHcCCCEEe-ecCCCccchhHHHHH
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFGA---------PRIIITDVDVQRLSIARNLGADETA-KVSTDIEDVDTDVGK  243 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~---------~~vv~v~~~~~~~~~~~~lg~~~~~-~~~~~~~~~~~~~~~  243 (361)
                      ..++++++||.+|||+ |..++.+++..|.         ..|+++|.++...     +.....+ ..+-...+....+.+
T Consensus        18 ~~~~~~~~vLDlGcG~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~-----~~~~~~~~~~d~~~~~~~~~~~~   91 (196)
T 2nyu_A           18 QILRPGLRVLDCGAAP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP-----LEGATFLCPADVTDPRTSQRILE   91 (196)
T ss_dssp             CCCCTTCEEEEETCCS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC-----CTTCEEECSCCTTSHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCC-CHHHHHHHHHhccccccccCCCceEEEEechhccc-----CCCCeEEEeccCCCHHHHHHHHH
Confidence            3478999999999988 9999999999874         4799999887431     1111111 111111111111111


Q ss_pred             HHhhcCCCccEEEEc-----cCCh------------HHHHHHHHhhcCCCEEEEEcc
Q 018075          244 IQNAMGSGIDVSFDC-----VGFD------------KTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       244 ~~~~~~~~~d~vld~-----~g~~------------~~~~~~~~~l~~~G~~v~~g~  283 (361)
                      .  ..+..||+|+..     .+..            ..+..+.+.|+|||+++....
T Consensus        92 ~--~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~  146 (196)
T 2nyu_A           92 V--LPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTW  146 (196)
T ss_dssp             H--SGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             h--cCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEec
Confidence            1  123579999953     2321            357778899999999987643

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=97.31  E-value=0.0023  Score=56.55  Aligned_cols=102  Identities=14%  Similarity=0.195  Sum_probs=72.9

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc----CCC-EEeecCCCccchhHHHHHHH
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GAD-ETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~-~~~~~~~~~~~~~~~~~~~~  245 (361)
                      ++...++++++||-+|||. |..++.+++..|. .|++++.+++..+.+++.    |.. .+....   .+..+    + 
T Consensus        65 ~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~----~-  134 (302)
T 3hem_A           65 LDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRI---QGWEE----F-  134 (302)
T ss_dssp             HHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHSCCSSCEEEEE---CCGGG----C-
T ss_pred             HHHcCCCCcCEEEEeeccC-cHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEE---CCHHH----c-
Confidence            4557789999999999986 8899999998886 799999999887777653    432 121111   12211    1 


Q ss_pred             hhcCCCccEEEEccCC---------------hHHHHHHHHhhcCCCEEEEEccCC
Q 018075          246 NAMGSGIDVSFDCVGF---------------DKTMSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       246 ~~~~~~~d~vld~~g~---------------~~~~~~~~~~l~~~G~~v~~g~~~  285 (361)
                         ...+|+|+....-               ...++.+.+.|+|||+++......
T Consensus       135 ---~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~  186 (302)
T 3hem_A          135 ---DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITI  186 (302)
T ss_dssp             ---CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEEC
T ss_pred             ---CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEec
Confidence               4689999874321               246788889999999999876443

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=97.30  E-value=0.00055  Score=59.10  Aligned_cols=127  Identities=18%  Similarity=0.306  Sum_probs=77.7

Q ss_pred             CCceEECCCCCCcccccccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH-
Q 018075          143 AKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-  221 (361)
Q Consensus       143 ~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-  221 (361)
                      ....+.+++++.+...... +.......+... ++++++||-+|||. |..++.+++ .|+ .|++++.++...+.+++ 
T Consensus        87 ~~~~~~l~p~~~fgtg~~~-tt~~~~~~l~~~-~~~~~~VLDiGcG~-G~l~~~la~-~g~-~v~gvDi~~~~v~~a~~n  161 (254)
T 2nxc_A           87 AEIPLVIEPGMAFGTGHHE-TTRLALKALARH-LRPGDKVLDLGTGS-GVLAIAAEK-LGG-KALGVDIDPMVLPQAEAN  161 (254)
T ss_dssp             SSEEEECCCC-----CCSH-HHHHHHHHHHHH-CCTTCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCGGGHHHHHHH
T ss_pred             CceEEEECCCccccCCCCH-HHHHHHHHHHHh-cCCCCEEEEecCCC-cHHHHHHHH-hCC-eEEEEECCHHHHHHHHHH
Confidence            3556777777665443321 111223334433 68899999999877 778887777 577 89999999988777665 


Q ss_pred             ---cCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccCCh---HHHHHHHHhhcCCCEEEEEccC
Q 018075          222 ---LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD---KTMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       222 ---lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~~g~~  284 (361)
                         .+.. + .+..  .+..+.   +   ....+|+|+.+....   ..++.+.+.|+|+|+++..+..
T Consensus       162 ~~~~~~~-v-~~~~--~d~~~~---~---~~~~fD~Vv~n~~~~~~~~~l~~~~~~LkpgG~lils~~~  220 (254)
T 2nxc_A          162 AKRNGVR-P-RFLE--GSLEAA---L---PFGPFDLLVANLYAELHAALAPRYREALVPGGRALLTGIL  220 (254)
T ss_dssp             HHHTTCC-C-EEEE--SCHHHH---G---GGCCEEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             HHHcCCc-E-EEEE--CChhhc---C---cCCCCCEEEECCcHHHHHHHHHHHHHHcCCCCEEEEEeec
Confidence               3433 1 1111  233221   2   135799999765322   3567788899999999986543

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=97.28  E-value=0.00058  Score=58.01  Aligned_cols=103  Identities=18%  Similarity=0.215  Sum_probs=70.3

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc----CCCE-EeecCCCccchhHHHHHHHhhc
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADE-TAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~-~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      ....++++||.+|+| .|..++.+++..+...|++++.+++..+.+++.    |... +....   .+..+.+....  .
T Consensus        50 ~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~~~~~~~--~  123 (233)
T 2gpy_A           50 LKMAAPARILEIGTA-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLF---GDALQLGEKLE--L  123 (233)
T ss_dssp             HHHHCCSEEEEECCT-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEEC---SCGGGSHHHHT--T
T ss_pred             HhccCCCEEEEecCC-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---CCHHHHHHhcc--c
Confidence            345678999999998 588899999988434899999999888777653    5421 21111   23322222221  1


Q ss_pred             CCCccEEEEccCC---hHHHHHHHHhhcCCCEEEEEc
Q 018075          249 GSGIDVSFDCVGF---DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       249 ~~~~d~vld~~g~---~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ...||+|+.....   ...++.+.+.|+|||+++...
T Consensus       124 ~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  160 (233)
T 2gpy_A          124 YPLFDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSDN  160 (233)
T ss_dssp             SCCEEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEET
T ss_pred             CCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence            3579999886653   346788889999999998864

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=97.22  E-value=0.0011  Score=54.60  Aligned_cols=103  Identities=15%  Similarity=0.186  Sum_probs=70.1

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHHHc----CC-CEEeecCCCccchhHHHHHHHh
Q 018075          173 RANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARNL----GA-DETAKVSTDIEDVDTDVGKIQN  246 (361)
Q Consensus       173 ~~~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~l----g~-~~~~~~~~~~~~~~~~~~~~~~  246 (361)
                      ...++++++||-+|||. |..++.+++..+ ...+++++.+++..+.+++.    |. ..+.....   +....    ..
T Consensus        17 ~~~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~---d~~~~----~~   88 (197)
T 3eey_A           17 KMFVKEGDTVVDATCGN-GNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKD---GHQNM----DK   88 (197)
T ss_dssp             HHHCCTTCEEEESCCTT-SHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECS---CGGGG----GG
T ss_pred             HhcCCCCCEEEEcCCCC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEEC---CHHHH----hh
Confidence            34578999999999887 888888888864 23799999999887776553    33 22221112   22111    11


Q ss_pred             hcCCCccEEEEccCC---------------hHHHHHHHHhhcCCCEEEEEcc
Q 018075          247 AMGSGIDVSFDCVGF---------------DKTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       247 ~~~~~~d~vld~~g~---------------~~~~~~~~~~l~~~G~~v~~g~  283 (361)
                      .....+|+|+...+-               ...++.+.+.|+++|+++....
T Consensus        89 ~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~  140 (197)
T 3eey_A           89 YIDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY  140 (197)
T ss_dssp             TCCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             hccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence            124679999876532               2478889999999999987753

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=97.22  E-value=0.00013  Score=62.40  Aligned_cols=102  Identities=15%  Similarity=0.090  Sum_probs=66.4

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      ..+|.+||-+|+|. |..+..+++..+. .+++++.+++-.+.+++..........-...+......   ......||.|
T Consensus        58 ~~~G~rVLdiG~G~-G~~~~~~~~~~~~-~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~---~~~~~~FD~i  132 (236)
T 3orh_A           58 SSKGGRVLEVGFGM-AIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAP---TLPDGHFDGI  132 (236)
T ss_dssp             TTTCEEEEEECCTT-SHHHHHHTTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGG---GSCTTCEEEE
T ss_pred             ccCCCeEEEECCCc-cHHHHHHHHhCCc-EEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcc---cccccCCceE
Confidence            47899999999885 8888888887666 78999999998888877542211000000122222221   1224569988


Q ss_pred             -EEccCCh----------HHHHHHHHhhcCCCEEEEEc
Q 018075          256 -FDCVGFD----------KTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       256 -ld~~g~~----------~~~~~~~~~l~~~G~~v~~g  282 (361)
                       +|++...          ..++++.+.|+|||+++.+.
T Consensus       133 ~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~  170 (236)
T 3orh_A          133 LYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN  170 (236)
T ss_dssp             EECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred             EEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence             4544221          35677889999999998764

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=97.20  E-value=0.00098  Score=56.25  Aligned_cols=104  Identities=12%  Similarity=0.053  Sum_probs=70.6

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcC-----CCEEEEEeCChhHHHHHHHc----C-----CCEEeecCCCccchhHH
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARAFG-----APRIIITDVDVQRLSIARNL----G-----ADETAKVSTDIEDVDTD  240 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g-----~~~vv~v~~~~~~~~~~~~l----g-----~~~~~~~~~~~~~~~~~  240 (361)
                      .++++++||.+|+|. |..++.+++..+     ...|++++.+++..+.+++.    +     ...+.....   +..+.
T Consensus        77 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~---d~~~~  152 (227)
T 2pbf_A           77 VLKPGSRAIDVGSGS-GYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHK---NIYQV  152 (227)
T ss_dssp             TSCTTCEEEEESCTT-SHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEEC---CGGGC
T ss_pred             hCCCCCEEEEECCCC-CHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEEC---ChHhc
Confidence            588999999999887 888999999876     22799999999887777653    3     122211111   22111


Q ss_pred             HHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEcc
Q 018075          241 VGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       241 ~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~  283 (361)
                      ..... .....||+|+........++.+.+.|+++|+++..-.
T Consensus       153 ~~~~~-~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~~~  194 (227)
T 2pbf_A          153 NEEEK-KELGLFDAIHVGASASELPEILVDLLAENGKLIIPIE  194 (227)
T ss_dssp             CHHHH-HHHCCEEEEEECSBBSSCCHHHHHHEEEEEEEEEEEE
T ss_pred             ccccC-ccCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEEc
Confidence            10000 0135799999877666567889999999999987643

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=97.20  E-value=0.0014  Score=55.79  Aligned_cols=106  Identities=19%  Similarity=0.268  Sum_probs=71.1

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHHHc----CCCEEeecCCCccchhHHHHHHHhh-
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNA-  247 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~-  247 (361)
                      ....++++||.+|+|. |..++.+++..+ ...+++++.+++..+.+++.    |...-+.+..  .+..+.+.++... 
T Consensus        56 ~~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~--~d~~~~~~~~~~~~  132 (239)
T 2hnk_A           56 TKISGAKRIIEIGTFT-GYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKL--GSALETLQVLIDSK  132 (239)
T ss_dssp             HHHHTCSEEEEECCTT-CHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE--SCHHHHHHHHHHCS
T ss_pred             HHhhCcCEEEEEeCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEE--CCHHHHHHHHHhhc
Confidence            3456789999999885 889999999874 34899999999887776653    5432111111  2333333322110 


Q ss_pred             ---------c-C-CCccEEEEccCCh---HHHHHHHHhhcCCCEEEEEc
Q 018075          248 ---------M-G-SGIDVSFDCVGFD---KTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       248 ---------~-~-~~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~~g  282 (361)
                               . + ..||+|+......   ..++.+.+.|++||+++...
T Consensus       133 ~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  181 (239)
T 2hnk_A          133 SAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADN  181 (239)
T ss_dssp             SCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             ccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence                     0 1 5799999876544   45688889999999998753

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=97.19  E-value=0.0049  Score=53.28  Aligned_cols=105  Identities=18%  Similarity=0.259  Sum_probs=65.2

Q ss_pred             CCCEEEEEC-CCH--HHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCC--CEEeecC-CCccchhHHHHHHHhh
Q 018075          178 PETNVMIMG-SGP--IGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGA--DETAKVS-TDIEDVDTDVGKIQNA  247 (361)
Q Consensus       178 ~g~~vlI~G-~g~--~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~--~~~~~~~-~~~~~~~~~~~~~~~~  247 (361)
                      .|.++||.| +|.  +|.+.++.+...|+ .|+.++++++..+.+++    ++.  ...+..+ .+..+..+.+.++.+.
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   84 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQ   84 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHH
Confidence            578899998 555  99999998888999 57777777654443333    332  1122111 2334455555554432


Q ss_pred             cCCCccEEEEccCCh--------------H---------------HHHHHHHhhcCCCEEEEEccC
Q 018075          248 MGSGIDVSFDCVGFD--------------K---------------TMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       248 ~~~~~d~vld~~g~~--------------~---------------~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      . .++|+++++.|..              +               ..+.+.+.+.++|+++.++..
T Consensus        85 ~-g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~  149 (266)
T 3oig_A           85 V-GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYL  149 (266)
T ss_dssp             H-SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECG
T ss_pred             h-CCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecc
Confidence            2 4799999988732              1               233445566778999988753

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=97.16  E-value=0.0058  Score=52.65  Aligned_cols=82  Identities=18%  Similarity=0.251  Sum_probs=52.6

Q ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHcCCCEEEEEeCChhHHHHH----HHcCCCE--EeecC-CCccchhHHHHHHHhh
Q 018075          178 PETNVMIMGS-G--PIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADE--TAKVS-TDIEDVDTDVGKIQNA  247 (361)
Q Consensus       178 ~g~~vlI~G~-g--~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~--~~~~~-~~~~~~~~~~~~~~~~  247 (361)
                      +|+++||.|+ |  ++|.+.++.+...|+ .|+.+++++++.+.+    ++++...  .+..+ ++.++..+.+.++.+.
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKD   83 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            6889999994 4  899999998889999 688888887655433    3344321  22111 2333444444444332


Q ss_pred             cCCCccEEEEccCC
Q 018075          248 MGSGIDVSFDCVGF  261 (361)
Q Consensus       248 ~~~~~d~vld~~g~  261 (361)
                       -+++|+++++.|.
T Consensus        84 -~G~iD~lvnnAg~   96 (256)
T 4fs3_A           84 -VGNIDGVYHSIAF   96 (256)
T ss_dssp             -HCCCSEEEECCCC
T ss_pred             -hCCCCEEEecccc
Confidence             2479999998773

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.16  E-value=0.0024  Score=49.51  Aligned_cols=94  Identities=14%  Similarity=0.173  Sum_probs=63.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      ...+++|.|+|.+|...++.+...|. .|++++.++++.+.+++.+...+. .+..  + .+.+++.   .-.++|+++.
T Consensus         5 ~~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~~~~~~~~-gd~~--~-~~~l~~~---~~~~~d~vi~   76 (141)
T 3llv_A            5 GRYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSKEKIELLEDEGFDAVI-ADPT--D-ESFYRSL---DLEGVSAVLI   76 (141)
T ss_dssp             -CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEEE-CCTT--C-HHHHHHS---CCTTCSEEEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHCCCcEEE-CCCC--C-HHHHHhC---CcccCCEEEE
Confidence            34689999999999999999999999 588999999999888887764332 2221  1 1222222   3457999999


Q ss_pred             ccCChHHH---HHHHHhhcCCCEEEE
Q 018075          258 CVGFDKTM---STALNATRPGGKVCL  280 (361)
Q Consensus       258 ~~g~~~~~---~~~~~~l~~~G~~v~  280 (361)
                      +.+....-   -...+.+. ..+++.
T Consensus        77 ~~~~~~~n~~~~~~a~~~~-~~~iia  101 (141)
T 3llv_A           77 TGSDDEFNLKILKALRSVS-DVYAIV  101 (141)
T ss_dssp             CCSCHHHHHHHHHHHHHHC-CCCEEE
T ss_pred             ecCCHHHHHHHHHHHHHhC-CceEEE
Confidence            99965322   22334445 455544

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=97.15  E-value=0.0036  Score=54.80  Aligned_cols=100  Identities=13%  Similarity=0.196  Sum_probs=70.4

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc----CCC-EEeecCCCccchhHHHHHHH
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GAD-ETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~-~~~~~~~~~~~~~~~~~~~~  245 (361)
                      ++..+++++++||-+|||. |..+..+++..|. .|++++.+++..+.+++.    +.. .+....   .++.    ++ 
T Consensus        57 ~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~---~d~~----~~-  126 (287)
T 1kpg_A           57 LGKLGLQPGMTLLDVGCGW-GATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLL---AGWE----QF-  126 (287)
T ss_dssp             HTTTTCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEE---SCGG----GC-
T ss_pred             HHHcCCCCcCEEEEECCcc-cHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEE---CChh----hC-
Confidence            3446788999999999887 8888899977888 899999999887777663    321 111111   1221    11 


Q ss_pred             hhcCCCccEEEEc-----cC---ChHHHHHHHHhhcCCCEEEEEcc
Q 018075          246 NAMGSGIDVSFDC-----VG---FDKTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       246 ~~~~~~~d~vld~-----~g---~~~~~~~~~~~l~~~G~~v~~g~  283 (361)
                         +..+|+|+..     .+   -...++.+.+.|+|||+++....
T Consensus       127 ---~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  169 (287)
T 1kpg_A          127 ---DEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTI  169 (287)
T ss_dssp             ---CCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred             ---CCCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence               2579999875     22   13468888999999999987653

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=97.14  E-value=0.001  Score=57.45  Aligned_cols=103  Identities=15%  Similarity=0.221  Sum_probs=72.1

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCC--EEeecCCCccchhHHHHHHHhhc
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD--ETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~--~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      ++...++++.+||-+||| .|..+..+++..+. .+++++.+++..+.+++....  .+.....   +..+.     ...
T Consensus        48 ~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~---d~~~~-----~~~  117 (266)
T 3ujc_A           48 LSDIELNENSKVLDIGSG-LGGGCMYINEKYGA-HTHGIDICSNIVNMANERVSGNNKIIFEAN---DILTK-----EFP  117 (266)
T ss_dssp             TTTCCCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHTCCSCTTEEEEEC---CTTTC-----CCC
T ss_pred             HHhcCCCCCCEEEEECCC-CCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhhcCCCeEEEEC---ccccC-----CCC
Confidence            445678899999999998 48888899987777 799999999999998886532  1111111   11110     011


Q ss_pred             CCCccEEEEccCC--------hHHHHHHHHhhcCCCEEEEEcc
Q 018075          249 GSGIDVSFDCVGF--------DKTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       249 ~~~~d~vld~~g~--------~~~~~~~~~~l~~~G~~v~~g~  283 (361)
                      ...+|+|+....-        ...++.+.+.|+|||+++....
T Consensus       118 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  160 (266)
T 3ujc_A          118 ENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDY  160 (266)
T ss_dssp             TTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             CCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence            4679999985321        1356788899999999998764

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=97.08  E-value=0.0088  Score=50.73  Aligned_cols=81  Identities=17%  Similarity=0.213  Sum_probs=52.6

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcCCCE-EeecC-CCccchhHHHHHHHhhcCCCccE
Q 018075          179 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGIDV  254 (361)
Q Consensus       179 g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~d~  254 (361)
                      +.++||.| +|++|.+.+..+...|+ .|+.+++++++.+.+ ++++... .+..+ .+..+..+.+.++.+.. +++|+
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~id~   80 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGH-QVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWG-GLPEL   80 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHH-CSCSE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc-CCCcE
Confidence            56899998 59999999998888999 688888888776544 3343211 11111 22334444444443322 47999


Q ss_pred             EEEccCC
Q 018075          255 SFDCVGF  261 (361)
Q Consensus       255 vld~~g~  261 (361)
                      ++++.|.
T Consensus        81 lvnnAg~   87 (235)
T 3l6e_A           81 VLHCAGT   87 (235)
T ss_dssp             EEEECCC
T ss_pred             EEECCCC
Confidence            9998874

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=97.07  E-value=0.013  Score=50.20  Aligned_cols=83  Identities=16%  Similarity=0.244  Sum_probs=52.8

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHc----C-CCEEeecC---CCccchhHHHHHHHh
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL----G-ADETAKVS---TDIEDVDTDVGKIQN  246 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l----g-~~~~~~~~---~~~~~~~~~~~~~~~  246 (361)
                      -.|.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ +++    + ....+..+   .+..+..+.+.++.+
T Consensus        10 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (252)
T 3f1l_A           10 LNDRIILVTGASDGIGREAAMTYARYGA-TVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV   88 (252)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHH
Confidence            3578999998 59999999998888999 688888888765433 222    1 11222211   222333344444433


Q ss_pred             hcCCCccEEEEccCC
Q 018075          247 AMGSGIDVSFDCVGF  261 (361)
Q Consensus       247 ~~~~~~d~vld~~g~  261 (361)
                      . .+++|+++++.|.
T Consensus        89 ~-~g~id~lv~nAg~  102 (252)
T 3f1l_A           89 N-YPRLDGVLHNAGL  102 (252)
T ss_dssp             H-CSCCSEEEECCCC
T ss_pred             h-CCCCCEEEECCcc
Confidence            2 3479999999874

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=97.07  E-value=0.0043  Score=53.39  Aligned_cols=106  Identities=15%  Similarity=0.245  Sum_probs=67.4

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcCCCE-EeecC-CCccchhHHHHHHHhhcCCCc
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      -.|.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ ++++... .+..+ .+..+....+.++.+. -+++
T Consensus         6 l~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g~i   83 (255)
T 4eso_A            6 YQGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQT-LGAI   83 (255)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHH-HSSE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHH-hCCC
Confidence            3578999998 59999999998888999 688888888776543 4454322 12111 2223333333333322 2479


Q ss_pred             cEEEEccCCh----------H---------------HHHHHHHhhcCCCEEEEEccC
Q 018075          253 DVSFDCVGFD----------K---------------TMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       253 d~vld~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      |+++++.|..          +               ..+.+.+.++.+|+++.++..
T Consensus        84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~  140 (255)
T 4eso_A           84 DLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSV  140 (255)
T ss_dssp             EEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCG
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECCh
Confidence            9999988742          1               223344455678999988754

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=97.06  E-value=0.00066  Score=57.60  Aligned_cols=105  Identities=11%  Similarity=0.137  Sum_probs=70.5

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCC--CEEeecCCCccchhHHHHHHHhhc
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA--DETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~--~~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      +....++++++||-+|||. |..+..+++..|...|++++.+++..+.+++.-.  ..+.....+..+...    ... .
T Consensus        67 l~~~~~~~~~~VLDlGcG~-G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~----~~~-~  140 (230)
T 1fbn_A           67 LKVMPIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQE----YAN-I  140 (230)
T ss_dssp             CCCCCCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGG----GTT-T
T ss_pred             ccccCCCCCCEEEEEcccC-CHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCccc----ccc-c
Confidence            3345678999999999987 8889999998875589999999988877665321  112111111111100    000 1


Q ss_pred             CCCccEEEEccCCh---H-HHHHHHHhhcCCCEEEEE
Q 018075          249 GSGIDVSFDCVGFD---K-TMSTALNATRPGGKVCLI  281 (361)
Q Consensus       249 ~~~~d~vld~~g~~---~-~~~~~~~~l~~~G~~v~~  281 (361)
                      ...+|+|+.....+   . .++.+.+.|+|+|+++..
T Consensus       141 ~~~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~  177 (230)
T 1fbn_A          141 VEKVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA  177 (230)
T ss_dssp             SCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CccEEEEEEecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence            25799999765544   2 478888999999999886

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=97.06  E-value=0.002  Score=53.67  Aligned_cols=100  Identities=18%  Similarity=0.165  Sum_probs=71.1

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCcc
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      ..+.++.+||-+|||. |..+..+++. |. .+++++.+++..+.+++.+...+.....   +....      .....+|
T Consensus        42 ~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~---d~~~~------~~~~~~D  109 (218)
T 3ou2_A           42 RAGNIRGDVLELASGT-GYWTRHLSGL-AD-RVTALDGSAEMIAEAGRHGLDNVEFRQQ---DLFDW------TPDRQWD  109 (218)
T ss_dssp             TTTTSCSEEEEESCTT-SHHHHHHHHH-SS-EEEEEESCHHHHHHHGGGCCTTEEEEEC---CTTSC------CCSSCEE
T ss_pred             hcCCCCCeEEEECCCC-CHHHHHHHhc-CC-eEEEEeCCHHHHHHHHhcCCCCeEEEec---ccccC------CCCCcee
Confidence            4478889999999876 7788888887 77 7999999999999998866333222112   21111      1246899


Q ss_pred             EEEEccCC--------hHHHHHHHHhhcCCCEEEEEccCC
Q 018075          254 VSFDCVGF--------DKTMSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       254 ~vld~~g~--------~~~~~~~~~~l~~~G~~v~~g~~~  285 (361)
                      +|+....-        ...++.+.+.|+|||+++......
T Consensus       110 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~  149 (218)
T 3ou2_A          110 AVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTD  149 (218)
T ss_dssp             EEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred             EEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence            99975421        346788889999999999876443

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.05  E-value=0.0036  Score=48.30  Aligned_cols=77  Identities=8%  Similarity=0.214  Sum_probs=52.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      ++++++|+|+|.+|...++.++..|. .|+.++.++++.+.+++.+... +..+.  .+. +.+.+.   ...++|+++.
T Consensus         5 ~~~~v~I~G~G~iG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~~~~~-~~~d~--~~~-~~l~~~---~~~~~d~vi~   76 (144)
T 2hmt_A            5 KNKQFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASYATHA-VIANA--TEE-NELLSL---GIRNFEYVIV   76 (144)
T ss_dssp             -CCSEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHTTTTTCSEE-EECCT--TCH-HHHHTT---TGGGCSEEEE
T ss_pred             cCCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCEE-EEeCC--CCH-HHHHhc---CCCCCCEEEE
Confidence            35789999999999999999999998 5788888888777666555432 22111  121 222221   1247999999


Q ss_pred             ccCCh
Q 018075          258 CVGFD  262 (361)
Q Consensus       258 ~~g~~  262 (361)
                      +++.+
T Consensus        77 ~~~~~   81 (144)
T 2hmt_A           77 AIGAN   81 (144)
T ss_dssp             CCCSC
T ss_pred             CCCCc
Confidence            99964

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=97.04  E-value=0.012  Score=50.42  Aligned_cols=81  Identities=17%  Similarity=0.124  Sum_probs=54.6

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCE-EeecC-CCccchhHHHHHHHhhcCCCccEEE
Q 018075          180 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGIDVSF  256 (361)
Q Consensus       180 ~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~d~vl  256 (361)
                      ++|||.| ++++|.+.++.+...|+ .|+.+++++++.+.+.+-+... .+..+ ++..+..+.+.+..+.. +++|+++
T Consensus         3 K~vlVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~-g~iDiLV   80 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFLEAGD-KVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKL-QRIDVLV   80 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHH-SCCCEEE
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHc-CCCCEEE
Confidence            6789998 68999999999999999 6888899888776655544332 12111 23334444444443322 4799999


Q ss_pred             EccCCh
Q 018075          257 DCVGFD  262 (361)
Q Consensus       257 d~~g~~  262 (361)
                      ++.|..
T Consensus        81 NNAG~~   86 (247)
T 3ged_A           81 NNACRG   86 (247)
T ss_dssp             ECCCCC
T ss_pred             ECCCCC
Confidence            988643

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=97.03  E-value=0.00081  Score=56.74  Aligned_cols=99  Identities=19%  Similarity=0.192  Sum_probs=68.5

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEeCChhHHHHHHHc----C-----CCEEeecCCCccchhHHHHHH
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARNL----G-----ADETAKVSTDIEDVDTDVGKI  244 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~l----g-----~~~~~~~~~~~~~~~~~~~~~  244 (361)
                      .++++++||-+|+|. |..+..+++..|. ..|++++.+++..+.+++.    +     .+.+.....   +.....   
T Consensus        74 ~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~---d~~~~~---  146 (226)
T 1i1n_A           74 QLHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVG---DGRMGY---  146 (226)
T ss_dssp             TSCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEES---CGGGCC---
T ss_pred             hCCCCCEEEEEcCCc-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEEC---CcccCc---
Confidence            478999999999886 8888889988763 2799999999887776542    2     112111111   111110   


Q ss_pred             HhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEc
Q 018075          245 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       245 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g  282 (361)
                        .....||+|+........++.+.+.|+|||+++..-
T Consensus       147 --~~~~~fD~i~~~~~~~~~~~~~~~~LkpgG~lv~~~  182 (226)
T 1i1n_A          147 --AEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPV  182 (226)
T ss_dssp             --GGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             --ccCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEE
Confidence              013579999987665556788999999999998754

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=97.02  E-value=0.0006  Score=57.65  Aligned_cols=98  Identities=16%  Similarity=0.200  Sum_probs=68.4

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCC------CEEEEEeCChhHHHHHHHc----C-----CCEEeecCCCccchhH
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARAFGA------PRIIITDVDVQRLSIARNL----G-----ADETAKVSTDIEDVDT  239 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~------~~vv~v~~~~~~~~~~~~l----g-----~~~~~~~~~~~~~~~~  239 (361)
                      .++++++||.+|+|. |..+..+++..+.      ..|++++.+++..+.+++.    +     ...+....   .+...
T Consensus        81 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~---~d~~~  156 (227)
T 1r18_A           81 HLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVE---GDGRK  156 (227)
T ss_dssp             TCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEE---SCGGG
T ss_pred             hCCCCCEEEEECCCc-cHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEE---CCccc
Confidence            578999999999887 8888889887763      3799999999887776552    1     11111111   12211


Q ss_pred             HHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEE
Q 018075          240 DVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       240 ~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~  281 (361)
                      .   +.  ....||+|+.........+.+.+.|+|||+++..
T Consensus       157 ~---~~--~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lvi~  193 (227)
T 1r18_A          157 G---YP--PNAPYNAIHVGAAAPDTPTELINQLASGGRLIVP  193 (227)
T ss_dssp             C---CG--GGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEE
T ss_pred             C---CC--cCCCccEEEECCchHHHHHHHHHHhcCCCEEEEE
Confidence            1   11  1257999998776665678899999999999875

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=97.02  E-value=0.0014  Score=54.35  Aligned_cols=101  Identities=11%  Similarity=0.024  Sum_probs=64.1

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc-CC---------------CEEeecCCCc
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL-GA---------------DETAKVSTDI  234 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l-g~---------------~~~~~~~~~~  234 (361)
                      +....+.++.+||..|||. |..+..+++. |. .|+++|.+++..+.+++. +.               ..+.-...+-
T Consensus        15 ~~~l~~~~~~~vLD~GCG~-G~~~~~la~~-g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~   91 (203)
T 1pjz_A           15 WSSLNVVPGARVLVPLCGK-SQDMSWLSGQ-GY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF   91 (203)
T ss_dssp             HHHHCCCTTCEEEETTTCC-SHHHHHHHHH-CC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC
T ss_pred             HHhcccCCCCEEEEeCCCC-cHhHHHHHHC-CC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECcc
Confidence            3445678999999999887 7778888886 88 799999999988887663 21               1110000111


Q ss_pred             cchhHHHHHHHhhcCCCccEEEEccCC----h----HHHHHHHHhhcCCCEEEEE
Q 018075          235 EDVDTDVGKIQNAMGSGIDVSFDCVGF----D----KTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~d~vld~~g~----~----~~~~~~~~~l~~~G~~v~~  281 (361)
                      .++...       ....||+|++...-    .    ..++.+.+.|+|||+++.+
T Consensus        92 ~~l~~~-------~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~  139 (203)
T 1pjz_A           92 FALTAR-------DIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLI  139 (203)
T ss_dssp             SSSTHH-------HHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred             ccCCcc-------cCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence            111100       01469999973211    1    2467788999999994433

>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*

Probab=97.00  E-value=0.0042  Score=52.12  Aligned_cols=104  Identities=18%  Similarity=0.213  Sum_probs=68.9

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHHH----cCCCE-EeecCCCccchhHHHHHHHhhc
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADE-TAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~-~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      ...++.+||-+|+|. |..++.+++..+ ...+++++.+++..+.+++    .|... +....   .+..+.+..+....
T Consensus        55 ~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~~~~~~~~~~  130 (223)
T 3duw_A           55 QIQGARNILEIGTLG-GYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRT---GLALDSLQQIENEK  130 (223)
T ss_dssp             HHHTCSEEEEECCTT-SHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE---SCHHHHHHHHHHTT
T ss_pred             HhhCCCEEEEecCCc-cHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---cCHHHHHHHHHhcC
Confidence            446789999999875 888888998873 2389999999987776654    35432 21111   24434443333212


Q ss_pred             CCCccEEEEccCC---hHHHHHHHHhhcCCCEEEEEc
Q 018075          249 GSGIDVSFDCVGF---DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       249 ~~~~d~vld~~g~---~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ...||+|+-....   ...++.+.+.|+|||.++.-.
T Consensus       131 ~~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~  167 (223)
T 3duw_A          131 YEPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGDN  167 (223)
T ss_dssp             CCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEES
T ss_pred             CCCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            2569999964432   246788889999999888754

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=96.99  E-value=0.002  Score=55.26  Aligned_cols=102  Identities=17%  Similarity=0.214  Sum_probs=68.6

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHHHc----CCC-EEeecCCCccchhHHHHHHHhhc
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARNL----GAD-ETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~l----g~~-~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      ...++.+||-+|+|. |..++.+++..+ ...|++++.+++..+.+++.    |.. .+....   .+..+.+..+.  .
T Consensus        60 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~---~d~~~~l~~~~--~  133 (248)
T 3tfw_A           60 RLTQAKRILEIGTLG-GYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLRE---GPALQSLESLG--E  133 (248)
T ss_dssp             HHHTCSEEEEECCTT-SHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEE---SCHHHHHHTCC--S
T ss_pred             hhcCCCEEEEecCCc-hHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---cCHHHHHHhcC--C
Confidence            456789999999886 888889998874 44899999999887776653    543 121111   23333222220  1


Q ss_pred             CCCccEEEEccCCh---HHHHHHHHhhcCCCEEEEEc
Q 018075          249 GSGIDVSFDCVGFD---KTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       249 ~~~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ...||+|+-.....   ..++.+.+.|+|||.++.-.
T Consensus       134 ~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~  170 (248)
T 3tfw_A          134 CPAFDLIFIDADKPNNPHYLRWALRYSRPGTLIIGDN  170 (248)
T ss_dssp             CCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEEC
T ss_pred             CCCeEEEEECCchHHHHHHHHHHHHhcCCCeEEEEeC
Confidence            24799999543322   46788889999999988754

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=96.99  E-value=0.0096  Score=51.37  Aligned_cols=81  Identities=16%  Similarity=0.169  Sum_probs=52.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhH-HHHHHHcCCCEEe-ecCCCccchhHHHHHHHhhcCCCccE
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQR-LSIARNLGADETA-KVSTDIEDVDTDVGKIQNAMGSGIDV  254 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~-~~~~~~lg~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~  254 (361)
                      .+.++||.| +|++|.+.++.+...|++ |+.+++++++ .+.+++.++..+. ++ .+..+..+.+.++.+. -+++|+
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~-~g~iD~  102 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGHR-VIISYRTEHASVTELRQAGAVALYGDF-SCETGIMAFIDLLKTQ-TSSLRA  102 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTCC-EEEEESSCCHHHHHHHHHTCEEEECCT-TSHHHHHHHHHHHHHH-CSCCSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHhcCCeEEECCC-CCHHHHHHHHHHHHHh-cCCCCE
Confidence            467899998 599999999988889995 6667666554 4455566643321 22 2333444444444332 347999


Q ss_pred             EEEccCC
Q 018075          255 SFDCVGF  261 (361)
Q Consensus       255 vld~~g~  261 (361)
                      ++++.|.
T Consensus       103 lv~nAg~  109 (260)
T 3gem_A          103 VVHNASE  109 (260)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9999873

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=96.97  E-value=0.012  Score=51.18  Aligned_cols=105  Identities=19%  Similarity=0.302  Sum_probs=65.1

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEE-eCChhHHHH----HHHcCCCE-EeecC-CCccchhHHHHHHHhhc
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIIT-DVDVQRLSI----ARNLGADE-TAKVS-TDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v-~~~~~~~~~----~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~  248 (361)
                      -.|.++||.| +|++|.+.++.+...|+ .|+.+ .++.++.+.    +++.+... .+..+ .+..+..+.+.++.+..
T Consensus        29 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  107 (271)
T 3v2g_A           29 LAGKTAFVTGGSRGIGAAIAKRLALEGA-AVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEAL  107 (271)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3678999998 58999999998888999 46655 444444332    23334332 12211 22333444444444322


Q ss_pred             CCCccEEEEccCCh----------H---------------HHHHHHHhhcCCCEEEEEcc
Q 018075          249 GSGIDVSFDCVGFD----------K---------------TMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       249 ~~~~d~vld~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~  283 (361)
                       +++|+++++.|..          +               ..+.+.+.|..+|+++.++.
T Consensus       108 -g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS  166 (271)
T 3v2g_A          108 -GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGS  166 (271)
T ss_dssp             -SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred             -CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence             4799999998742          1               34445567778999998864

>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38

Probab=96.94  E-value=0.0068  Score=53.98  Aligned_cols=101  Identities=23%  Similarity=0.269  Sum_probs=67.7

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHh
Q 018075          172 RRANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQN  246 (361)
Q Consensus       172 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~  246 (361)
                      ....+++|++||-+|||+ |..++++++.++ ...|++++.++++.+.+++    +|...+.....+..++..       
T Consensus       112 ~~l~~~~g~~VLDlg~G~-G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~-------  183 (315)
T 1ixk_A          112 VALDPKPGEIVADMAAAP-GGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGE-------  183 (315)
T ss_dssp             HHHCCCTTCEEEECCSSC-SHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGG-------
T ss_pred             HHhCCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhccc-------
Confidence            345688999999998776 667778888763 2379999999998776655    465433222222111111       


Q ss_pred             hcCCCccEEEE---ccCC-------------------------hHHHHHHHHhhcCCCEEEEE
Q 018075          247 AMGSGIDVSFD---CVGF-------------------------DKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       247 ~~~~~~d~vld---~~g~-------------------------~~~~~~~~~~l~~~G~~v~~  281 (361)
                       ....||.|+-   |+|.                         ...++.+.+.|+|||+++..
T Consensus       184 -~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~s  245 (315)
T 1ixk_A          184 -LNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYS  245 (315)
T ss_dssp             -GCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             -ccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence             1457999985   3331                         24677888999999999874

>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}

Probab=96.93  E-value=0.0099  Score=51.27  Aligned_cols=103  Identities=16%  Similarity=0.183  Sum_probs=67.0

Q ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcC
Q 018075          170 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       170 ~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      .+....++++++||-+|||. |..++.+++. |+ .|++++.+++..+.+++.-....+..+-  .+....   ......
T Consensus        37 il~~l~l~~g~~VLDlGcGt-G~~a~~La~~-g~-~V~gvD~S~~ml~~Ar~~~~~~~v~~~~--~~~~~~---~~~~~~  108 (261)
T 3iv6_A           37 DIFLENIVPGSTVAVIGAST-RFLIEKALER-GA-SVTVFDFSQRMCDDLAEALADRCVTIDL--LDITAE---IPKELA  108 (261)
T ss_dssp             HHHTTTCCTTCEEEEECTTC-HHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHTSSSCCEEEE--CCTTSC---CCGGGT
T ss_pred             HHHhcCCCCcCEEEEEeCcc-hHHHHHHHhc-CC-EEEEEECCHHHHHHHHHHHHhccceeee--eecccc---cccccC
Confidence            34556789999999999986 8888888875 77 7999999999998887743222111100  011000   000013


Q ss_pred             CCccEEEEccCC----h----HHHHHHHHhhcCCCEEEEE
Q 018075          250 SGIDVSFDCVGF----D----KTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       250 ~~~d~vld~~g~----~----~~~~~~~~~l~~~G~~v~~  281 (361)
                      ..||+|+.+..-    .    ..+..+.+.| |||+++..
T Consensus       109 ~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS  147 (261)
T 3iv6_A          109 GHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRAS  147 (261)
T ss_dssp             TCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEE
T ss_pred             CCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEE
Confidence            579999875321    1    2567777889 99998864

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=96.93  E-value=0.0059  Score=54.98  Aligned_cols=103  Identities=19%  Similarity=0.158  Sum_probs=65.6

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCC---Cccch------hHHHHHHHhh
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST---DIEDV------DTDVGKIQNA  247 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~---~~~~~------~~~~~~~~~~  247 (361)
                      -+|++|.|.|.|.+|+.+++.++.+|+ +|++.+.+.++.++++++++..+- ..+   ...|+      ...+..- ..
T Consensus       173 L~GktV~I~G~GnVG~~~A~~l~~~Ga-kVvvsD~~~~~~~~a~~~ga~~v~-~~ell~~~~DIliP~A~~~~I~~~-~~  249 (355)
T 1c1d_A          173 LDGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHTAVA-LEDVLSTPCDVFAPCAMGGVITTE-VA  249 (355)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEECC-GGGGGGCCCSEEEECSCSCCBCHH-HH
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHhcCCEEeC-hHHhhcCccceecHhHHHhhcCHH-HH
Confidence            589999999999999999999999999 677888887776777778764321 000   00010      0000000 00


Q ss_pred             cCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEc
Q 018075          248 MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       248 ~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ..-+.++|+++...+...++..+.|..+|.++..+
T Consensus       250 ~~lk~~iVie~AN~p~t~~eA~~~L~~~gIlv~Pd  284 (355)
T 1c1d_A          250 RTLDCSVVAGAANNVIADEAASDILHARGILYAPD  284 (355)
T ss_dssp             HHCCCSEECCSCTTCBCSHHHHHHHHHTTCEECCH
T ss_pred             hhCCCCEEEECCCCCCCCHHHHHHHHhCCEEEECC
Confidence            01246788887776633336677788888666544

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=96.91  E-value=0.0046  Score=52.97  Aligned_cols=101  Identities=22%  Similarity=0.232  Sum_probs=69.7

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCC-EEeecCCCccchhHHHHHHH
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGAD-ETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~~~~~~  245 (361)
                      +....++++.+||-+|||. |..+..+++..|. .+++++.+++..+.+++    .|.. .+.....   +..+.    .
T Consensus        29 ~~~~~~~~~~~VLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~---d~~~~----~   99 (256)
T 1nkv_A           29 GRVLRMKPGTRILDLGSGS-GEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHN---DAAGY----V   99 (256)
T ss_dssp             HHHTCCCTTCEEEEETCTT-CHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES---CCTTC----C
T ss_pred             HHhcCCCCCCEEEEECCCC-CHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEC---ChHhC----C
Confidence            4556789999999999887 8888899998887 79999999987776654    3432 1111111   11110    0


Q ss_pred             hhcCCCccEEEEcc------CChHHHHHHHHhhcCCCEEEEEc
Q 018075          246 NAMGSGIDVSFDCV------GFDKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       246 ~~~~~~~d~vld~~------g~~~~~~~~~~~l~~~G~~v~~g  282 (361)
                        ....||+|+...      .....++.+.+.|+|||+++...
T Consensus       100 --~~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~  140 (256)
T 1nkv_A          100 --ANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  140 (256)
T ss_dssp             --CSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             --cCCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEec
Confidence              135799998621      22346888899999999998864

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=96.91  E-value=0.0072  Score=50.82  Aligned_cols=101  Identities=16%  Similarity=0.191  Sum_probs=68.4

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEEeCChhHHHHHHH----cCCC--EEeecCCCccchhHHHHHHH
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAF--GAPRIIITDVDVQRLSIARN----LGAD--ETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~--g~~~vv~v~~~~~~~~~~~~----lg~~--~~~~~~~~~~~~~~~~~~~~  245 (361)
                      .+.+++.+||-+|+|. |..++.+++.+  +. .+++++.+++..+.+++    .|..  .+....   .+..+.+..+ 
T Consensus        52 ~~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~---gda~~~l~~~-  125 (221)
T 3dr5_A           52 TNGNGSTGAIAITPAA-GLVGLYILNGLADNT-TLTCIDPESEHQRQAKALFREAGYSPSRVRFLL---SRPLDVMSRL-  125 (221)
T ss_dssp             SCCTTCCEEEEESTTH-HHHHHHHHHHSCTTS-EEEEECSCHHHHHHHHHHHHHTTCCGGGEEEEC---SCHHHHGGGS-
T ss_pred             hCCCCCCCEEEEcCCc-hHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEE---cCHHHHHHHh-
Confidence            4555677999999987 88999999986  45 79999999988776654    4543  222211   2332222211 


Q ss_pred             hhcCCCccEEEEccCCh---HHHHHHHHhhcCCCEEEEEc
Q 018075          246 NAMGSGIDVSFDCVGFD---KTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       246 ~~~~~~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~~g  282 (361)
                        ....||+||-.....   ..++.+.+.|+|||.++.-.
T Consensus       126 --~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~dn  163 (221)
T 3dr5_A          126 --ANDSYQLVFGQVSPMDLKALVDAAWPLLRRGGALVLAD  163 (221)
T ss_dssp             --CTTCEEEEEECCCTTTHHHHHHHHHHHEEEEEEEEETT
T ss_pred             --cCCCcCeEEEcCcHHHHHHHHHHHHHHcCCCcEEEEeC
Confidence              146799998754432   35778889999999998743

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=96.90  E-value=0.011  Score=52.19  Aligned_cols=83  Identities=24%  Similarity=0.362  Sum_probs=53.7

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HH---cCCCE-EeecC-CCccchhHHHHHHHhhcC
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN---LGADE-TAKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      -.|.++||.| +|++|.+.+..+...|+ .|+.++++.++.+.+ ++   .+... .+..+ .+..+..+.+.++.+.. 
T Consensus        29 l~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-  106 (301)
T 3tjr_A           29 FDGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLL-  106 (301)
T ss_dssp             STTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhC-
Confidence            3678999998 59999999998888999 688888888765433 22   23322 12111 22233444444443322 


Q ss_pred             CCccEEEEccCC
Q 018075          250 SGIDVSFDCVGF  261 (361)
Q Consensus       250 ~~~d~vld~~g~  261 (361)
                      +++|+++++.|.
T Consensus       107 g~id~lvnnAg~  118 (301)
T 3tjr_A          107 GGVDVVFSNAGI  118 (301)
T ss_dssp             SSCSEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            479999999883

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=96.90  E-value=0.016  Score=49.50  Aligned_cols=82  Identities=18%  Similarity=0.294  Sum_probs=52.4

Q ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcCCCEEeecCCCccchhHHHHHHHhhcCCCcc
Q 018075          176 VGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADETAKVSTDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       176 ~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      -.++.++||.| +|++|.+.+..+...|+ .|+.++++.++.+.+ +++........ .+..+.. .+.++.+. -.++|
T Consensus        11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~-~D~~~~~-~~~~~~~~-~~~id   86 (249)
T 3f9i_A           11 DLTGKTSLITGASSGIGSAIARLLHKLGS-KVIISGSNEEKLKSLGNALKDNYTIEV-CNLANKE-ECSNLISK-TSNLD   86 (249)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEE-CCTTSHH-HHHHHHHT-CSCCS
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhccCccEEE-cCCCCHH-HHHHHHHh-cCCCC
Confidence            45788999998 59999999998888999 688888888776544 44443322111 1112222 22222221 24799


Q ss_pred             EEEEccCC
Q 018075          254 VSFDCVGF  261 (361)
Q Consensus       254 ~vld~~g~  261 (361)
                      +++++.|.
T Consensus        87 ~li~~Ag~   94 (249)
T 3f9i_A           87 ILVCNAGI   94 (249)
T ss_dssp             EEEECCC-
T ss_pred             EEEECCCC
Confidence            99999874

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=96.90  E-value=0.0067  Score=52.56  Aligned_cols=81  Identities=21%  Similarity=0.198  Sum_probs=51.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCE-EeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE-TAKVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.++++.++.+.+....... ..++ .+..+..+.+.++.+.. +++|++
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~~-g~iD~l   91 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGH-PLLLLARRVERLKALNLPNTLCAQVDV-TDKYTFDTAITRAEKIY-GPADAI   91 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHTTCCTTEEEEECCT-TCHHHHHHHHHHHHHHH-CSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHhhcCCceEEEecC-CCHHHHHHHHHHHHHHC-CCCCEE
Confidence            467899998 59999999998888999 5778888876654332211111 1122 22334444444443322 479999


Q ss_pred             EEccCC
Q 018075          256 FDCVGF  261 (361)
Q Consensus       256 ld~~g~  261 (361)
                      +++.|.
T Consensus        92 vnnAg~   97 (266)
T 3p19_A           92 VNNAGM   97 (266)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999884

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=96.90  E-value=0.016  Score=49.74  Aligned_cols=106  Identities=22%  Similarity=0.352  Sum_probs=69.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH----HHHcCCCEE-eecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI----ARNLGADET-AKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~----~~~lg~~~~-~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      +|+++||.| ++++|.+.++.+...|+ .|+.+++++++.+.    +++.|.+.. +..+ ++..+..+.+.++.+. -+
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~-~G   85 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAE-GI   85 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHT-TC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH-CC
Confidence            688999998 68999999999999999 68888888876432    233443322 1111 2333444455554432 35


Q ss_pred             CccEEEEccCCh-------------------------HHHHHHHHhh---cCCCEEEEEccCC
Q 018075          251 GIDVSFDCVGFD-------------------------KTMSTALNAT---RPGGKVCLIGLAK  285 (361)
Q Consensus       251 ~~d~vld~~g~~-------------------------~~~~~~~~~l---~~~G~~v~~g~~~  285 (361)
                      ++|+++++.|..                         ...+..++.|   ..+|+++.++...
T Consensus        86 ~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~  148 (255)
T 4g81_D           86 HVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLT  148 (255)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGG
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehh
Confidence            799999998754                         1334455666   3569999887543

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=96.90  E-value=0.01  Score=53.48  Aligned_cols=132  Identities=15%  Similarity=0.144  Sum_probs=81.7

Q ss_pred             CEEEEECCCHHHHHHHHHHH-H-cCCCEEEEEeCChhHHH-HHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075          180 TNVMIMGSGPIGLVTLLAAR-A-FGAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  256 (361)
Q Consensus       180 ~~vlI~G~g~~G~~ai~la~-~-~g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  256 (361)
                      -+|.|+|+|.+|...++.++ . .+++.+.+.+.++++.+ +++++|......      ++.+.+      ...++|+|+
T Consensus         9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~------~~~~~l------~~~~~D~V~   76 (346)
T 3cea_A            9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYT------NYKDMI------DTENIDAIF   76 (346)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEES------CHHHHH------TTSCCSEEE
T ss_pred             ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccC------CHHHHh------cCCCCCEEE
Confidence            47899999999988887766 4 46644556688887764 456677643321      232222      134799999


Q ss_pred             EccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHh----hhc-CcEEEEeec--CCCcHHHHHHHHHcCCC
Q 018075          257 DCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPA----AAR-EVDVIGIFR--YRSTWPLCIEFLRSGKI  324 (361)
Q Consensus       257 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~----~~~-~~~i~~~~~--~~~~~~~~~~~l~~g~~  324 (361)
                      .|++...+.+.+..+|..|-.+ .++-+.....-....+    -.+ +..+.....  +...++.+.+++++|.+
T Consensus        77 i~tp~~~h~~~~~~al~~G~~v-~~eKp~~~~~~~~~~l~~~a~~~~~~~~~~~~~~r~~p~~~~~~~~i~~g~i  150 (346)
T 3cea_A           77 IVAPTPFHPEMTIYAMNAGLNV-FCEKPLGLDFNEVDEMAKVIKSHPNQIFQSGFMRRYDDSYRYAKKIVDNGDI  150 (346)
T ss_dssp             ECSCGGGHHHHHHHHHHTTCEE-EECSCCCSCHHHHHHHHHHHHTCTTSCEECCCGGGTCHHHHHHHHHHHTTTT
T ss_pred             EeCChHhHHHHHHHHHHCCCEE-EEcCCCCCCHHHHHHHHHHHHhCCCCeEEEecccccCHHHHHHHHHHHcCCC
Confidence            9999888888888888886444 4542221111111111    123 444432222  24468889999999987

>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31

Probab=96.89  E-value=0.0077  Score=55.89  Aligned_cols=106  Identities=15%  Similarity=0.153  Sum_probs=69.8

Q ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-----------HHcC--CCEEeecCCCccc
Q 018075          170 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-----------RNLG--ADETAKVSTDIED  236 (361)
Q Consensus       170 ~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-----------~~lg--~~~~~~~~~~~~~  236 (361)
                      .++...++++++||=+|||. |..++.+|+..|...|++++.+++..+.+           +.+|  ...+.....+  +
T Consensus       234 ml~~l~l~~g~~VLDLGCGs-G~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD--~  310 (433)
T 1u2z_A          234 VYQQCQLKKGDTFMDLGSGV-GNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKK--S  310 (433)
T ss_dssp             HHHHTTCCTTCEEEEESCTT-SHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESS--C
T ss_pred             HHHhcCCCCCCEEEEeCCCc-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcC--c
Confidence            44567789999999999986 88999999988876899999999865544           3455  2332211111  1


Q ss_pred             hhH--HHHHHHhhcCCCccEEEEc--cCCh---HHHHHHHHhhcCCCEEEEEc
Q 018075          237 VDT--DVGKIQNAMGSGIDVSFDC--VGFD---KTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       237 ~~~--~~~~~~~~~~~~~d~vld~--~g~~---~~~~~~~~~l~~~G~~v~~g  282 (361)
                      +..  .....    ...||+|+-.  ...+   ..+..+.+.|++||+++...
T Consensus       311 ~~~~~~~~~~----~~~FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~lVi~d  359 (433)
T 1u2z_A          311 FVDNNRVAEL----IPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK  359 (433)
T ss_dssp             STTCHHHHHH----GGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             cccccccccc----cCCCCEEEEeCccccccHHHHHHHHHHhCCCCeEEEEee
Confidence            110  01111    2469999962  2223   23567888999999999874

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=96.89  E-value=0.0031  Score=54.29  Aligned_cols=97  Identities=10%  Similarity=-0.013  Sum_probs=63.7

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH-cCC--------------------CEEeecCCC
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGA--------------------DETAKVSTD  233 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~--------------------~~~~~~~~~  233 (361)
                      ..+++.+||..|||. |..+..|++. |+ .|+++|.++...+.+++ .+.                    ..+.-..  
T Consensus        65 ~~~~~~~vLD~GCG~-G~~~~~La~~-G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--  139 (252)
T 2gb4_A           65 KGQSGLRVFFPLCGK-AIEMKWFADR-GH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYC--  139 (252)
T ss_dssp             TTCCSCEEEETTCTT-CTHHHHHHHT-TC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEE--
T ss_pred             cCCCCCeEEEeCCCC-cHHHHHHHHC-CC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEE--
Confidence            356889999999886 7788888875 88 79999999998888864 321                    1111111  


Q ss_pred             ccchhHHHHHHHhhcCCCccEEEEccC-----C---hHHHHHHHHhhcCCCEEEEE
Q 018075          234 IEDVDTDVGKIQNAMGSGIDVSFDCVG-----F---DKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~d~vld~~g-----~---~~~~~~~~~~l~~~G~~v~~  281 (361)
                       .++.+    +.......||+|++...     .   ...++.+.+.|+|||+++++
T Consensus       140 -~D~~~----l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~  190 (252)
T 2gb4_A          140 -CSIFD----LPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVA  190 (252)
T ss_dssp             -SCTTT----GGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred             -Ccccc----CCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence             12211    11111257999998432     1   13577788999999998654

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=96.89  E-value=0.013  Score=51.06  Aligned_cols=82  Identities=20%  Similarity=0.318  Sum_probs=53.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCC-EEeecC-CCccchhHHHHHHHhhcCCCcc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGAD-ETAKVS-TDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      .|.++||.| +|++|.+.++.+...|+ .|+.+++++++.+ .+++++.. ..+..+ .+..+..+.+.++.+.. +++|
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD  105 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGC-HVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAF-GGVD  105 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHH-SSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            578899998 58999999998888999 6888888877654 34455532 222211 22233444444443322 4799


Q ss_pred             EEEEccCC
Q 018075          254 VSFDCVGF  261 (361)
Q Consensus       254 ~vld~~g~  261 (361)
                      +++++.|.
T Consensus       106 ~lvnnAg~  113 (277)
T 3gvc_A          106 KLVANAGV  113 (277)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999874

>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*

Probab=96.88  E-value=0.0083  Score=54.97  Aligned_cols=107  Identities=15%  Similarity=0.080  Sum_probs=70.3

Q ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH-----------cCC--CEEeecCCCccc
Q 018075          170 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-----------LGA--DETAKVSTDIED  236 (361)
Q Consensus       170 ~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-----------lg~--~~~~~~~~~~~~  236 (361)
                      .+...+++++++||=+|||. |..++++|+..|+..+++++.+++..+++++           +|.  ..+-....   |
T Consensus       165 il~~l~l~~gd~VLDLGCGt-G~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~G---D  240 (438)
T 3uwp_A          165 MIDEIKMTDDDLFVDLGSGV-GQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERG---D  240 (438)
T ss_dssp             HHHHHCCCTTCEEEEESCTT-SHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEEC---C
T ss_pred             HHHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEEC---c
Confidence            34667899999999999887 8888999988898779999999865555443           343  33322222   2


Q ss_pred             hhHHHHHHHhhcCCCccEEEEccC--Ch---HHHHHHHHhhcCCCEEEEEcc
Q 018075          237 VDTDVGKIQNAMGSGIDVSFDCVG--FD---KTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       237 ~~~~~~~~~~~~~~~~d~vld~~g--~~---~~~~~~~~~l~~~G~~v~~g~  283 (361)
                      +.+..  +.. .-..+|+|+-..-  .+   ..+...++.|+|||+++....
T Consensus       241 ~~~lp--~~d-~~~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVssE~  289 (438)
T 3uwp_A          241 FLSEE--WRE-RIANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSKP  289 (438)
T ss_dssp             TTSHH--HHH-HHHTCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEESSC
T ss_pred             ccCCc--ccc-ccCCccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEeec
Confidence            22211  100 0125999985211  12   356677889999999998863

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=96.86  E-value=0.006  Score=54.15  Aligned_cols=102  Identities=19%  Similarity=0.301  Sum_probs=69.9

Q ss_pred             HhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCC-EEeecCCCccchhHHHHHHH
Q 018075          172 RRAN-VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGAD-ETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       172 ~~~~-~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~~~~~~  245 (361)
                      +... ++++++||-+|||. |..+..+++..|. .|++++.+++..+.+++    .|.. .+.....+..+..     + 
T Consensus       110 ~~l~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----~-  181 (312)
T 3vc1_A          110 DHLGQAGPDDTLVDAGCGR-GGSMVMAHRRFGS-RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTP-----F-  181 (312)
T ss_dssp             TTSCCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-----C-
T ss_pred             HHhccCCCCCEEEEecCCC-CHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCC-----C-
Confidence            3344 78999999999876 8888888887787 79999999988777665    3432 1111111111110     0 


Q ss_pred             hhcCCCccEEEEc-----cCChHHHHHHHHhhcCCCEEEEEcc
Q 018075          246 NAMGSGIDVSFDC-----VGFDKTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       246 ~~~~~~~d~vld~-----~g~~~~~~~~~~~l~~~G~~v~~g~  283 (361)
                        ....||+|+..     .+-...++.+.+.|+|||+++....
T Consensus       182 --~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~  222 (312)
T 3vc1_A          182 --DKGAVTASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTITG  222 (312)
T ss_dssp             --CTTCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             --CCCCEeEEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEEc
Confidence              13679999873     2334578899999999999998763

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=96.85  E-value=0.015  Score=50.02  Aligned_cols=82  Identities=22%  Similarity=0.319  Sum_probs=53.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHH-Hc---CCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NL---GADE-TAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~l---g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+. ++   +... .+..+ .+..+..+.+.++.+.. +
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   82 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKF-G   82 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence            578899998 59999999998888999 6888888887665443 33   2221 11111 22334444444443322 4


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|+++++.|.
T Consensus        83 ~id~lv~nAg~   93 (257)
T 3imf_A           83 RIDILINNAAG   93 (257)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999883

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=96.85  E-value=0.018  Score=50.60  Aligned_cols=106  Identities=19%  Similarity=0.208  Sum_probs=66.8

Q ss_pred             CCCCEEEEEC-CCH--HHHHHHHHHHHcCCCEEEEEeCChhHHHHH----HHcCCCEEeecC-CCccchhHHHHHHHhhc
Q 018075          177 GPETNVMIMG-SGP--IGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADETAKVS-TDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       177 ~~g~~vlI~G-~g~--~G~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~  248 (361)
                      -.|.++||.| +|.  +|.+.++.+...|+ .|+.++++++..+.+    ++.+....+..+ .+..+..+.+.++.+. 
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-  106 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKK-  106 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHh-
Confidence            4678999998 455  99999998888999 577777776543333    333432222222 2233444444444432 


Q ss_pred             CCCccEEEEccCCh-----------------------------HHHHHHHHhhcCCCEEEEEccC
Q 018075          249 GSGIDVSFDCVGFD-----------------------------KTMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       249 ~~~~d~vld~~g~~-----------------------------~~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      -+++|+++++.|..                             ...+.+.+.+..+|+++.++..
T Consensus       107 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~  171 (293)
T 3grk_A          107 WGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYY  171 (293)
T ss_dssp             TSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECG
T ss_pred             cCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeeh
Confidence            24799999998742                             1234455667788999988753

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=96.85  E-value=0.014  Score=50.68  Aligned_cols=82  Identities=21%  Similarity=0.235  Sum_probs=52.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH----HHcCCC-EEeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGAD-ETAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~-~~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      .+.++||.| +|++|.+.+..+...|+ .|+.+++++++.+.+    ++.+.. ..+..+ .+..+..+.+.++.+.. +
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g  104 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGA-MVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEF-G  104 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHc-C
Confidence            578899998 59999999998888999 688888887765432    223322 112111 22334444444443322 4


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|+++++.|.
T Consensus       105 ~iD~lvnnAg~  115 (270)
T 3ftp_A          105 ALNVLVNNAGI  115 (270)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=96.84  E-value=0.0044  Score=52.19  Aligned_cols=105  Identities=20%  Similarity=0.244  Sum_probs=70.2

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHHHc----CCC-EEeecCCCccchhHHHHHHHhh
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARNL----GAD-ETAKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~l----g~~-~~~~~~~~~~~~~~~~~~~~~~  247 (361)
                      ....++.+||-+|+| .|..++.+++..+ ...+++++.+++..+.+++.    |.. .+....   .+..+.+..+...
T Consensus        65 ~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~---~d~~~~~~~~~~~  140 (229)
T 2avd_A           65 ARLIQAKKALDLGTF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRL---KPALETLDELLAA  140 (229)
T ss_dssp             HHHTTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEE---SCHHHHHHHHHHT
T ss_pred             HHhcCCCEEEEEcCC-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEE---cCHHHHHHHHHhc
Confidence            345678899999988 5888999998764 34899999999887777653    432 221111   2333333333211


Q ss_pred             c-CCCccEEEEccCCh---HHHHHHHHhhcCCCEEEEEc
Q 018075          248 M-GSGIDVSFDCVGFD---KTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       248 ~-~~~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~~g  282 (361)
                      + ...||+|+......   ..++.+.+.|++||.++...
T Consensus       141 ~~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~  179 (229)
T 2avd_A          141 GEAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLR  179 (229)
T ss_dssp             TCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEC
Confidence            0 15799998754432   46888899999999998864

>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*

Probab=96.84  E-value=0.011  Score=50.52  Aligned_cols=103  Identities=15%  Similarity=0.153  Sum_probs=68.1

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhhc-
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAF--GAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAM-  248 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~--g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~-  248 (361)
                      ..++.+||-+|+|. |..++.+++.+  +. .+++++.+++..+.+++    .|...-+.+..  .+..+.+..+...+ 
T Consensus        77 ~~~~~~VLeiG~G~-G~~~~~la~~~~~~~-~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~--gda~~~l~~l~~~~~  152 (247)
T 1sui_A           77 LINAKNTMEIGVYT-GYSLLATALAIPEDG-KILAMDINKENYELGLPVIKKAGVDHKIDFRE--GPALPVLDEMIKDEK  152 (247)
T ss_dssp             HTTCCEEEEECCGG-GHHHHHHHHHSCTTC-EEEEEESCCHHHHHHHHHHHHTTCGGGEEEEE--SCHHHHHHHHHHSGG
T ss_pred             hhCcCEEEEeCCCc-CHHHHHHHHhCCCCC-EEEEEECCHHHHHHHHHHHHHcCCCCCeEEEE--CCHHHHHHHHHhccC
Confidence            45678999999876 88888999886  45 79999999988777665    35421111111  23333333332111 


Q ss_pred             -CCCccEEEEccCC---hHHHHHHHHhhcCCCEEEEEc
Q 018075          249 -GSGIDVSFDCVGF---DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       249 -~~~~d~vld~~g~---~~~~~~~~~~l~~~G~~v~~g  282 (361)
                       ...||+||-....   ...++.+.+.|+|||.++.-.
T Consensus       153 ~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~  190 (247)
T 1sui_A          153 NHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDN  190 (247)
T ss_dssp             GTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred             CCCCEEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEec
Confidence             3579999864432   246778899999999998643

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=96.83  E-value=0.0012  Score=55.79  Aligned_cols=103  Identities=14%  Similarity=0.126  Sum_probs=70.5

Q ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCC--EEeecCCCccchhHHHHHHHhh
Q 018075          170 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD--ETAKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       170 ~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~--~~~~~~~~~~~~~~~~~~~~~~  247 (361)
                      .++...++++++||-+|||. |..+..+++.. . .+++++.+++..+.+++....  .+....   .+..+..   .  
T Consensus        62 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~-~-~v~~vD~~~~~~~~a~~~~~~~~~v~~~~---~d~~~~~---~--  130 (231)
T 1vbf_A           62 MLDELDLHKGQKVLEIGTGI-GYYTALIAEIV-D-KVVSVEINEKMYNYASKLLSYYNNIKLIL---GDGTLGY---E--  130 (231)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHS-S-EEEEEESCHHHHHHHHHHHTTCSSEEEEE---SCGGGCC---G--
T ss_pred             HHHhcCCCCCCEEEEEcCCC-CHHHHHHHHHc-C-EEEEEeCCHHHHHHHHHHHhhcCCeEEEE---CCccccc---c--
Confidence            34556788999999999886 88888888874 4 799999999988888764221  111111   1221111   0  


Q ss_pred             cCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEcc
Q 018075          248 MGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       248 ~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~  283 (361)
                      ....||+|+....-....+.+.+.|+|||+++..-.
T Consensus       131 ~~~~fD~v~~~~~~~~~~~~~~~~L~pgG~l~~~~~  166 (231)
T 1vbf_A          131 EEKPYDRVVVWATAPTLLCKPYEQLKEGGIMILPIG  166 (231)
T ss_dssp             GGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEEEC
T ss_pred             cCCCccEEEECCcHHHHHHHHHHHcCCCcEEEEEEc
Confidence            135799999866544345678899999999987643

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=96.83  E-value=0.0043  Score=54.04  Aligned_cols=102  Identities=15%  Similarity=0.206  Sum_probs=69.9

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEeCChhHHHHHHHc-----CCCEEeecCCCccchhHHHHHH
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARNL-----GADETAKVSTDIEDVDTDVGKI  244 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~l-----g~~~~~~~~~~~~~~~~~~~~~  244 (361)
                      +....++++++||-+|||. |..++.+++.. ....+++++.+++..+.+++.     |.+.+.....   ++.+.   +
T Consensus       103 ~~~~~~~~~~~VLD~G~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~---d~~~~---~  175 (275)
T 1yb2_A          103 IMRCGLRPGMDILEVGVGS-GNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRS---DIADF---I  175 (275)
T ss_dssp             ---CCCCTTCEEEEECCTT-SHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECS---CTTTC---C
T ss_pred             HHHcCCCCcCEEEEecCCC-CHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEEC---chhcc---C
Confidence            3456789999999999874 77888888874 233799999999888777653     5332221111   22111   1


Q ss_pred             HhhcCCCccEEEEccCCh-HHHHHHHHhhcCCCEEEEEc
Q 018075          245 QNAMGSGIDVSFDCVGFD-KTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       245 ~~~~~~~~d~vld~~g~~-~~~~~~~~~l~~~G~~v~~g  282 (361)
                         ....+|+|+.....+ ..++.+.+.|+|+|+++...
T Consensus       176 ---~~~~fD~Vi~~~~~~~~~l~~~~~~LkpgG~l~i~~  211 (275)
T 1yb2_A          176 ---SDQMYDAVIADIPDPWNHVQKIASMMKPGSVATFYL  211 (275)
T ss_dssp             ---CSCCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEE
T ss_pred             ---cCCCccEEEEcCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence               135799999866544 46888999999999998865

>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41

Probab=96.82  E-value=0.0036  Score=53.87  Aligned_cols=100  Identities=19%  Similarity=0.272  Sum_probs=67.5

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc----CCCEEeecCCCccchhHHHHHHHhh
Q 018075          172 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       172 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~  247 (361)
                      .....+++.+||-+|||. |..+..+++.. . .+++++.+++..+.+++.    +...+.....+..++.     +   
T Consensus        31 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~-~-~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~-----~---   99 (260)
T 1vl5_A           31 QIAALKGNEEVLDVATGG-GHVANAFAPFV-K-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP-----F---   99 (260)
T ss_dssp             HHHTCCSCCEEEEETCTT-CHHHHHHGGGS-S-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC-----S---
T ss_pred             HHhCCCCCCEEEEEeCCC-CHHHHHHHHhC-C-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCC-----C---
Confidence            345678999999999884 77888887764 4 799999999887776653    3222111111111110     1   


Q ss_pred             cCCCccEEEEccCC------hHHHHHHHHhhcCCCEEEEEc
Q 018075          248 MGSGIDVSFDCVGF------DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       248 ~~~~~d~vld~~g~------~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ....||+|+....-      ...+..+.+.|+|||+++...
T Consensus       100 ~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~  140 (260)
T 1vl5_A          100 TDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVD  140 (260)
T ss_dssp             CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence            13579999986432      257888999999999999864

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=96.82  E-value=0.015  Score=50.98  Aligned_cols=105  Identities=18%  Similarity=0.209  Sum_probs=64.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhH-HH----HHHHcCCCEE-eecC-CCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQR-LS----IARNLGADET-AKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~-~~----~~~~lg~~~~-~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      +|.++||.| +|++|.+.++.+...|+ .|+.++++.++ .+    .+++.+.... +..+ .+..+..+.+.++.+.. 
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-  123 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL-  123 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            578999998 59999999998888999 57777666542 22    2233443321 2111 22233444444443322 


Q ss_pred             CCccEEEEccCCh-----------H---------------HHHHHHHhhcCCCEEEEEccC
Q 018075          250 SGIDVSFDCVGFD-----------K---------------TMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       250 ~~~d~vld~~g~~-----------~---------------~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      +++|+++++.|..           +               ..+.+.+.|..+|+++.++..
T Consensus       124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~  184 (291)
T 3ijr_A          124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASI  184 (291)
T ss_dssp             SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCT
T ss_pred             CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEech
Confidence            4799999987632           1               233445566778999988743

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=96.82  E-value=0.015  Score=50.73  Aligned_cols=105  Identities=16%  Similarity=0.259  Sum_probs=64.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhH-HH----HHHHcCCCE-EeecC-CCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQR-LS----IARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~-~~----~~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      ++.++||.| +|++|.+.++.+...|+ .|+.++++.++ .+    .+++.+... .+..+ .+..+....+.++.+.. 
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-  105 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF-  105 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            468899998 59999999998888999 57777666542 22    233345332 12111 22233333444333222 


Q ss_pred             CCccEEEEccCCh----------H---------------HHHHHHHhhcCCCEEEEEccC
Q 018075          250 SGIDVSFDCVGFD----------K---------------TMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       250 ~~~d~vld~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      +++|+++++.|..          +               ..+.+.+.|+.+|+++.++..
T Consensus       106 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~  165 (283)
T 1g0o_A          106 GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSI  165 (283)
T ss_dssp             SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCG
T ss_pred             CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEech
Confidence            4799999998742          1               224455666678999998753

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=96.81  E-value=0.025  Score=48.52  Aligned_cols=80  Identities=23%  Similarity=0.283  Sum_probs=54.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH----HHHcCCCEE---eecCCCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI----ARNLGADET---AKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~----~~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      +|+.+||.| ++++|.+.++.+...|+ .|+.+++++++.+.    +++.|....   .|. ++.++..+.+.++.+.. 
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv-t~~~~v~~~~~~~~~~~-   82 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGMGKEVLGVKADV-SKKKDVEEFVRRTFETY-   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-TSHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccC-CCHHHHHHHHHHHHHHc-
Confidence            688999998 58999999998888999 68888898876543    233454322   222 23344555555444332 


Q ss_pred             CCccEEEEccC
Q 018075          250 SGIDVSFDCVG  260 (361)
Q Consensus       250 ~~~d~vld~~g  260 (361)
                      +++|+++++.|
T Consensus        83 G~iDiLVNNAG   93 (254)
T 4fn4_A           83 SRIDVLCNNAG   93 (254)
T ss_dssp             SCCCEEEECCC
T ss_pred             CCCCEEEECCc
Confidence            47999999887

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=96.81  E-value=0.0063  Score=49.31  Aligned_cols=101  Identities=20%  Similarity=0.245  Sum_probs=69.0

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCC-CEEeecCCCccchhHHHHHHH
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGA-DETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~-~~~~~~~~~~~~~~~~~~~~~  245 (361)
                      +....+.++++||.+|+|. |..+..+++.. . .+++++.+++..+.+++    .+. ..+....   .+..+.   +.
T Consensus        26 ~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~-~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~---~d~~~~---~~   96 (192)
T 1l3i_A           26 MCLAEPGKNDVAVDVGCGT-GGVTLELAGRV-R-RVYAIDRNPEAISTTEMNLQRHGLGDNVTLME---GDAPEA---LC   96 (192)
T ss_dssp             HHHHCCCTTCEEEEESCTT-SHHHHHHHTTS-S-EEEEEESCHHHHHHHHHHHHHTTCCTTEEEEE---SCHHHH---HT
T ss_pred             HHhcCCCCCCEEEEECCCC-CHHHHHHHHhc-C-EEEEEECCHHHHHHHHHHHHHcCCCcceEEEe---cCHHHh---cc
Confidence            4456788999999999887 88888888766 4 89999999988877765    343 2221111   233221   11


Q ss_pred             hhcCCCccEEEEccCC---hHHHHHHHHhhcCCCEEEEEc
Q 018075          246 NAMGSGIDVSFDCVGF---DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       246 ~~~~~~~d~vld~~g~---~~~~~~~~~~l~~~G~~v~~g  282 (361)
                        ....+|+|+.....   ...++.+.+.|+++|+++...
T Consensus        97 --~~~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~  134 (192)
T 1l3i_A           97 --KIPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTA  134 (192)
T ss_dssp             --TSCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             --cCCCCCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEe
Confidence              11479999976441   346788889999999998753

>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3

Probab=96.80  E-value=0.011  Score=49.34  Aligned_cols=100  Identities=11%  Similarity=0.152  Sum_probs=64.4

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHH----HHHHHcCCCEEeecCCCccchhHHHHHHHhhcC
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRL----SIARNLGADETAKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~----~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      ..+++|++||=+|||+ |..+..+++..+...|+++|.+++..    +.+++..  .+.....+......    ... ..
T Consensus        53 ~~~~~g~~VLDlGcGt-G~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~--~v~~~~~d~~~~~~----~~~-~~  124 (210)
T 1nt2_A           53 LKLRGDERVLYLGAAS-GTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERN--NIIPLLFDASKPWK----YSG-IV  124 (210)
T ss_dssp             CCCCSSCEEEEETCTT-SHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCS--SEEEECSCTTCGGG----TTT-TC
T ss_pred             cCCCCCCEEEEECCcC-CHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCC--CeEEEEcCCCCchh----hcc-cc
Confidence            4678999999999886 77888888887644799999998743    3344332  11111111111100    000 13


Q ss_pred             CCccEEEEccCChH----HHHHHHHhhcCCCEEEEE
Q 018075          250 SGIDVSFDCVGFDK----TMSTALNATRPGGKVCLI  281 (361)
Q Consensus       250 ~~~d~vld~~g~~~----~~~~~~~~l~~~G~~v~~  281 (361)
                      ..||+|+.....+.    .+..+.+.|+|||+++..
T Consensus       125 ~~fD~V~~~~~~~~~~~~~l~~~~r~LkpgG~l~i~  160 (210)
T 1nt2_A          125 EKVDLIYQDIAQKNQIEILKANAEFFLKEKGEVVIM  160 (210)
T ss_dssp             CCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cceeEEEEeccChhHHHHHHHHHHHHhCCCCEEEEE
Confidence            57999998754332    267788999999999886

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=96.78  E-value=0.012  Score=51.17  Aligned_cols=81  Identities=12%  Similarity=0.140  Sum_probs=52.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HH---HcCCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-AR---NLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~---~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      .|.++||.| ++++|.+.++.+...|+ .|+.+++++++.+. .+   +.+... .+..+ .+..+....+.++.+.  .
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~--g  108 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI--A  108 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH--S
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh--C
Confidence            578899998 59999999998888999 67777777654332 22   234322 11111 2333445555555443  5


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|+++++.|.
T Consensus       109 ~iD~lvnnAg~  119 (275)
T 4imr_A          109 PVDILVINASA  119 (275)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999884

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.77  E-value=0.033  Score=48.06  Aligned_cols=106  Identities=18%  Similarity=0.244  Sum_probs=65.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcCCCE-EeecC-CCccchhHHHHHHHhhcCCCcc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ ++++... .+..+ .+..+..+.+.++.+.. +++|
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~iD   82 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEF-GRLH   82 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHc-CCCc
Confidence            467899998 59999999998888999 688888888766543 4454221 11111 22233444444433222 4799


Q ss_pred             EEEEccCCh----------H---------------HHHHHHHhhcCCCEEEEEccCC
Q 018075          254 VSFDCVGFD----------K---------------TMSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       254 ~vld~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~~  285 (361)
                      +++++.|..          +               ..+.+.+.++.+|+++.++...
T Consensus        83 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~  139 (263)
T 2a4k_A           83 GVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVA  139 (263)
T ss_dssp             EEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCT
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecch
Confidence            999988742          1               1223344453479999887544

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.74  E-value=0.017  Score=53.37  Aligned_cols=96  Identities=16%  Similarity=0.181  Sum_probs=69.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      .+.+|+|.|.|.+|+.+++.++..|. .|++++.++++.+.+++.|...+.- +....   +.+   ...+-.++|+|+-
T Consensus         3 ~~~~viIiG~Gr~G~~va~~L~~~g~-~vvvId~d~~~v~~~~~~g~~vi~G-Dat~~---~~L---~~agi~~A~~viv   74 (413)
T 3l9w_A            3 HGMRVIIAGFGRFGQITGRLLLSSGV-KMVVLDHDPDHIETLRKFGMKVFYG-DATRM---DLL---ESAGAAKAEVLIN   74 (413)
T ss_dssp             -CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEECCHHHHHHHHHTTCCCEES-CTTCH---HHH---HHTTTTTCSEEEE
T ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHhCCCeEEEc-CCCCH---HHH---HhcCCCccCEEEE
Confidence            45689999999999999999999999 6999999999999999988764331 22111   222   2234568999999


Q ss_pred             ccCChHHH---HHHHHhhcCCCEEEEE
Q 018075          258 CVGFDKTM---STALNATRPGGKVCLI  281 (361)
Q Consensus       258 ~~g~~~~~---~~~~~~l~~~G~~v~~  281 (361)
                      +++.+..-   -...+.+.|..+++.-
T Consensus        75 ~~~~~~~n~~i~~~ar~~~p~~~Iiar  101 (413)
T 3l9w_A           75 AIDDPQTNLQLTEMVKEHFPHLQIIAR  101 (413)
T ss_dssp             CCSSHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred             CCCChHHHHHHHHHHHHhCCCCeEEEE
Confidence            99977432   3344566788777654

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=96.72  E-value=0.015  Score=51.83  Aligned_cols=82  Identities=11%  Similarity=0.241  Sum_probs=53.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HH---cCC--C-EEeecC-CCccchhHHHHHHHhhc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN---LGA--D-ETAKVS-TDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~--~-~~~~~~-~~~~~~~~~~~~~~~~~  248 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.++++.++.+.+ ++   .+.  . ..+..+ .+..++.+.+.++... 
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-   84 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR-   84 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh-
Confidence            578999998 59999999998888999 688888888765433 22   232  1 112111 2333444455444432 


Q ss_pred             CCCccEEEEccCC
Q 018075          249 GSGIDVSFDCVGF  261 (361)
Q Consensus       249 ~~~~d~vld~~g~  261 (361)
                      .+++|+++++.|.
T Consensus        85 ~g~id~lv~nAg~   97 (319)
T 3ioy_A           85 FGPVSILCNNAGV   97 (319)
T ss_dssp             TCCEEEEEECCCC
T ss_pred             CCCCCEEEECCCc
Confidence            3479999999883

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=96.72  E-value=0.015  Score=49.98  Aligned_cols=82  Identities=15%  Similarity=0.203  Sum_probs=50.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEE-eCChhHHHHH-H---HcCCCE-EeecC-CCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIIT-DVDVQRLSIA-R---NLGADE-TAKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v-~~~~~~~~~~-~---~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      ++.++||.| +|++|.+.++.+...|++ |+.+ .+++++.+.+ +   +.+... .+..+ .+..+..+.+.++.+.. 
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~-vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   80 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYN-IVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETF-   80 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            578899998 599999999988889995 5554 7777654432 2   234322 12111 22233444444443322 


Q ss_pred             CCccEEEEccCC
Q 018075          250 SGIDVSFDCVGF  261 (361)
Q Consensus       250 ~~~d~vld~~g~  261 (361)
                      +++|+++++.|.
T Consensus        81 g~id~lv~nAg~   92 (258)
T 3oid_A           81 GRLDVFVNNAAS   92 (258)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999873

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=96.72  E-value=0.032  Score=48.53  Aligned_cols=82  Identities=22%  Similarity=0.363  Sum_probs=54.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCCEE-eecC-CCccchhHHHHHHHhhcCCCcc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADET-AKVS-TDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.++++.++.+ .+++++.... +..+ .+..+..+.+.++.+.. +++|
T Consensus        26 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD  103 (277)
T 4dqx_A           26 NQRVCIVTGGGSGIGRATAELFAKNGA-YVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKW-GRVD  103 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            578999998 59999999998888999 6888888877654 3444554321 2111 22233444444443322 4799


Q ss_pred             EEEEccCC
Q 018075          254 VSFDCVGF  261 (361)
Q Consensus       254 ~vld~~g~  261 (361)
                      +++++.|.
T Consensus       104 ~lv~nAg~  111 (277)
T 4dqx_A          104 VLVNNAGF  111 (277)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999884

>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*

Probab=96.71  E-value=0.0052  Score=53.16  Aligned_cols=98  Identities=21%  Similarity=0.254  Sum_probs=65.7

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHc---CCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhh
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARAF---GAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~~---g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~  247 (361)
                      .+++|.+||-+|||. |..+..+++..   |+ .|+++|.+++-.+.+++    .+...-+.+..  .+..+    +   
T Consensus        67 ~~~~~~~vLDlGcGt-G~~~~~la~~~~~~~~-~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~--~D~~~----~---  135 (261)
T 4gek_A           67 FVQPGTQVYDLGCSL-GAATLSVRRNIHHDNC-KIIAIDNSPAMIERCRRHIDAYKAPTPVDVIE--GDIRD----I---  135 (261)
T ss_dssp             HCCTTCEEEEETCTT-THHHHHHHHTCCSSSC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEE--SCTTT----C---
T ss_pred             hCCCCCEEEEEeCCC-CHHHHHHHHhcCCCCC-EEEEEECCHHHHHHHHHHHHhhccCceEEEee--ccccc----c---
Confidence            378999999999876 78888888875   45 79999999987777665    23221111111  11111    1   


Q ss_pred             cCCCccEEEEccCC-----h---HHHHHHHHhhcCCCEEEEEcc
Q 018075          248 MGSGIDVSFDCVGF-----D---KTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       248 ~~~~~d~vld~~g~-----~---~~~~~~~~~l~~~G~~v~~g~  283 (361)
                      ....+|+|+....-     +   ..++.+.+.|+|||+++....
T Consensus       136 ~~~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~  179 (261)
T 4gek_A          136 AIENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEK  179 (261)
T ss_dssp             CCCSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             cccccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEec
Confidence            23568988764321     1   357889999999999998753

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=96.71  E-value=0.028  Score=48.49  Aligned_cols=82  Identities=20%  Similarity=0.202  Sum_probs=52.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HH----cCCC--EEeecC-CCccchhHHHHHHHhhc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN----LGAD--ETAKVS-TDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~----lg~~--~~~~~~-~~~~~~~~~~~~~~~~~  248 (361)
                      .+.++||.| ++++|.+.++.+...|+ .|+.++++.++.+.+ ++    .+..  ..+..+ .+..+..+.+.++.+..
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   85 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTL   85 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            578899998 59999999998888999 688888887765432 22    2322  111111 22233444444443322


Q ss_pred             CCCccEEEEccCC
Q 018075          249 GSGIDVSFDCVGF  261 (361)
Q Consensus       249 ~~~~d~vld~~g~  261 (361)
                       +++|+++++.|.
T Consensus        86 -g~id~lvnnAg~   97 (265)
T 3lf2_A           86 -GCASILVNNAGQ   97 (265)
T ss_dssp             -CSCSEEEECCCC
T ss_pred             -CCCCEEEECCCC
Confidence             479999999874

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=96.71  E-value=0.032  Score=47.99  Aligned_cols=83  Identities=20%  Similarity=0.302  Sum_probs=53.4

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-H---HcCCCE-EeecC-CCccchhHHHHHHHhhcC
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-R---NLGADE-TAKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~---~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      -.+.++||.| +|++|.+.+..+...|+ .|+.++++.++.+.+ +   +.+... .+..+ .+..+..+.+.++.+.. 
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-  104 (262)
T 3rkr_A           27 LSGQVAVVTGASRGIGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAH-  104 (262)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhc-
Confidence            4578999998 59999999998888999 688888888765433 2   233321 11111 22233444444443322 


Q ss_pred             CCccEEEEccCC
Q 018075          250 SGIDVSFDCVGF  261 (361)
Q Consensus       250 ~~~d~vld~~g~  261 (361)
                      +++|+++++.|.
T Consensus       105 g~id~lv~~Ag~  116 (262)
T 3rkr_A          105 GRCDVLVNNAGV  116 (262)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            479999999885

>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}

Probab=96.70  E-value=0.0059  Score=57.10  Aligned_cols=100  Identities=16%  Similarity=0.206  Sum_probs=66.3

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhhc
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      ..+++|++||=+|||+ |..++++|+.++ ...|++++.++++.+.+++    +|...+.....   +.......    .
T Consensus       101 L~~~~g~~VLDlcaGp-Ggkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~---Da~~l~~~----~  172 (456)
T 3m4x_A          101 AAAKPGEKVLDLCAAP-GGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNH---APAELVPH----F  172 (456)
T ss_dssp             HCCCTTCEEEESSCTT-CHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECC---CHHHHHHH----H
T ss_pred             cCCCCCCEEEEECCCc-CHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeC---CHHHhhhh----c
Confidence            4678999999988765 556667776653 3479999999988776644    67654433222   32222111    1


Q ss_pred             CCCccEEEE---ccCCh-------------------------HHHHHHHHhhcCCCEEEEE
Q 018075          249 GSGIDVSFD---CVGFD-------------------------KTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       249 ~~~~d~vld---~~g~~-------------------------~~~~~~~~~l~~~G~~v~~  281 (361)
                      ...||.||-   |+|..                         ..+..+++.|+|||+++..
T Consensus       173 ~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYs  233 (456)
T 3m4x_A          173 SGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYS  233 (456)
T ss_dssp             TTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred             cccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence            467999976   44422                         3577788899999999853

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=96.70  E-value=0.031  Score=47.97  Aligned_cols=82  Identities=21%  Similarity=0.371  Sum_probs=54.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCCE-EeecC-CCccchhHHHHHHHhhcCCCcc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.++++.++.+ .+++++... .+..+ .+..+..+.+.++.+. -+++|
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~g~id   84 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGA-TVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEH-AGGLD   84 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHH-SSSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHH-cCCCC
Confidence            578999998 59999999998888999 6888888877654 445555332 22211 2223344444444332 34799


Q ss_pred             EEEEccCC
Q 018075          254 VSFDCVGF  261 (361)
Q Consensus       254 ~vld~~g~  261 (361)
                      +++++.|.
T Consensus        85 ~lv~~Ag~   92 (259)
T 4e6p_A           85 ILVNNAAL   92 (259)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999884

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.69  E-value=0.0069  Score=51.98  Aligned_cols=35  Identities=23%  Similarity=0.421  Sum_probs=31.6

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075          179 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  213 (361)
Q Consensus       179 g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~  213 (361)
                      +.+|+|+|+|++|..+++.+...|...+..++.+.
T Consensus        31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~   65 (249)
T 1jw9_B           31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT   65 (249)
T ss_dssp             HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence            47899999999999999999999988888898876

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=96.67  E-value=0.019  Score=50.59  Aligned_cols=105  Identities=20%  Similarity=0.226  Sum_probs=66.2

Q ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHcCCCEEEEEeCChhHHHHH----HHcCCCEEeecC-CCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMGS-G--PIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADETAKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G~-g--~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      .|.++||.|+ |  ++|.+.++.+...|+ .|+.++++++..+.+    ++.+....+..+ .+..+..+.+.++.+.. 
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-  106 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEW-  106 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            5789999985 5  999999998888999 578887876544333    334433333222 23334444454444322 


Q ss_pred             CCccEEEEccCCh--------------H---------------HHHHHHHhhcCCCEEEEEccC
Q 018075          250 SGIDVSFDCVGFD--------------K---------------TMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       250 ~~~d~vld~~g~~--------------~---------------~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      +++|+++++.|..              +               ..+.+.+.+..+|+++.++..
T Consensus       107 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~  170 (296)
T 3k31_A          107 GSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYY  170 (296)
T ss_dssp             SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECG
T ss_pred             CCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEeh
Confidence            4799999998742              1               223344456678999988743

>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}

Probab=96.67  E-value=0.0099  Score=50.53  Aligned_cols=105  Identities=16%  Similarity=0.165  Sum_probs=68.7

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhhc-
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAM-  248 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~-  248 (361)
                      ...++.+||-+|+|. |..++.+++.+. ...+++++.+++..+.+++    .|...-+.+..  .+..+.+..+...+ 
T Consensus        67 ~~~~~~~VLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~--gda~~~l~~l~~~~~  143 (237)
T 3c3y_A           67 KLVNAKKTIEVGVFT-GYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIE--SDAMLALDNLLQGQE  143 (237)
T ss_dssp             HHTTCCEEEEECCTT-SHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE--SCHHHHHHHHHHSTT
T ss_pred             HhhCCCEEEEeCCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--cCHHHHHHHHHhccC
Confidence            345678999999876 778888888863 3389999999988777754    35432111111  23434433332211 


Q ss_pred             -CCCccEEEEccCC---hHHHHHHHHhhcCCCEEEEEc
Q 018075          249 -GSGIDVSFDCVGF---DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       249 -~~~~d~vld~~g~---~~~~~~~~~~l~~~G~~v~~g  282 (361)
                       ...||+||-....   ...++.+.+.|+|||.++.-.
T Consensus       144 ~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d~  181 (237)
T 3c3y_A          144 SEGSYDFGFVDADKPNYIKYHERLMKLVKVGGIVAYDN  181 (237)
T ss_dssp             CTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCCcCEEEECCchHHHHHHHHHHHHhcCCCeEEEEec
Confidence             3579999865432   235778889999999988743

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=96.66  E-value=0.026  Score=49.22  Aligned_cols=104  Identities=22%  Similarity=0.296  Sum_probs=64.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCC------------hhHHHH----HHHcCCCE-EeecC-CCccchh
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVD------------VQRLSI----ARNLGADE-TAKVS-TDIEDVD  238 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~------------~~~~~~----~~~lg~~~-~~~~~-~~~~~~~  238 (361)
                      .|.++||.| +|++|.+.++.+...|+ .|+.++++            .++.+.    +++.+... .+..+ .+..+..
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   87 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVS   87 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHH
Confidence            578999998 58999999998888999 57777665            333322    23334322 11111 2223344


Q ss_pred             HHHHHHHhhcCCCccEEEEccCCh--------H---------------HHHHHHHhhcCCCEEEEEcc
Q 018075          239 TDVGKIQNAMGSGIDVSFDCVGFD--------K---------------TMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       239 ~~~~~~~~~~~~~~d~vld~~g~~--------~---------------~~~~~~~~l~~~G~~v~~g~  283 (361)
                      +.+.++.+.. +++|+++++.|..        +               ..+.+.+.|..+|+++.++.
T Consensus        88 ~~~~~~~~~~-g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS  154 (287)
T 3pxx_A           88 RELANAVAEF-GKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGS  154 (287)
T ss_dssp             HHHHHHHHHH-SCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred             HHHHHHHHHc-CCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEecc
Confidence            4444443322 4799999988742        1               22334455677899998864

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=96.66  E-value=0.031  Score=46.36  Aligned_cols=92  Identities=15%  Similarity=0.243  Sum_probs=60.9

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEcc
Q 018075          181 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV  259 (361)
Q Consensus       181 ~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  259 (361)
                      +|||.| +|.+|...++.+...|. .|+++++++++.+.+. .+... +..+-  .+...  ..+     .++|+||++.
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~-~~~~~-~~~D~--~d~~~--~~~-----~~~d~vi~~a   69 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGH-EVTAIVRNAGKITQTH-KDINI-LQKDI--FDLTL--SDL-----SDQNVVVDAY   69 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCSHHHHHHC-SSSEE-EECCG--GGCCH--HHH-----TTCSEEEECC
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCC-EEEEEEcCchhhhhcc-CCCeE-Eeccc--cChhh--hhh-----cCCCEEEECC
Confidence            689999 59999999999988998 6888888887765543 23332 22111  11111  222     4799999999


Q ss_pred             CCh--------HHHHHHHHhhcCC--CEEEEEccC
Q 018075          260 GFD--------KTMSTALNATRPG--GKVCLIGLA  284 (361)
Q Consensus       260 g~~--------~~~~~~~~~l~~~--G~~v~~g~~  284 (361)
                      |..        .....+++.+...  ++++.++..
T Consensus        70 g~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~  104 (221)
T 3ew7_A           70 GISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGA  104 (221)
T ss_dssp             CSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred             cCCccccchHHHHHHHHHHHHHhcCCceEEEEecc
Confidence            864        2345666666554  788887643

>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}

Probab=96.66  E-value=0.0022  Score=54.09  Aligned_cols=95  Identities=18%  Similarity=0.217  Sum_probs=68.2

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCC-EEeecCCCccchhHHHHHHHhhc-CCCcc
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD-ETAKVSTDIEDVDTDVGKIQNAM-GSGID  253 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~d  253 (361)
                      ++++.+||-+|||. |..+..+++. |+ .|++++.++...+.+++.... ..+.  .   +..+.   +. .. ...||
T Consensus        46 ~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~--~---d~~~~---~~-~~~~~~fD  113 (226)
T 3m33_A           46 LTPQTRVLEAGCGH-GPDAARFGPQ-AA-RWAAYDFSPELLKLARANAPHADVYE--W---NGKGE---LP-AGLGAPFG  113 (226)
T ss_dssp             CCTTCEEEEESCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHCTTSEEEE--C---CSCSS---CC-TTCCCCEE
T ss_pred             CCCCCeEEEeCCCC-CHHHHHHHHc-CC-EEEEEECCHHHHHHHHHhCCCceEEE--c---chhhc---cC-CcCCCCEE
Confidence            47889999999876 7788888876 77 799999999998888876322 1221  1   11000   00 01 35799


Q ss_pred             EEEEccCChHHHHHHHHhhcCCCEEEEEc
Q 018075          254 VSFDCVGFDKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       254 ~vld~~g~~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      +|+........+..+.+.|+|||+++..+
T Consensus       114 ~v~~~~~~~~~l~~~~~~LkpgG~l~~~~  142 (226)
T 3m33_A          114 LIVSRRGPTSVILRLPELAAPDAHFLYVG  142 (226)
T ss_dssp             EEEEESCCSGGGGGHHHHEEEEEEEEEEE
T ss_pred             EEEeCCCHHHHHHHHHHHcCCCcEEEEeC
Confidence            99998766678899999999999999443

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=96.65  E-value=0.022  Score=49.30  Aligned_cols=107  Identities=14%  Similarity=0.252  Sum_probs=66.2

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEe-CChhHHH----HHHHcCCCEE-eecC-CCccchhHHHHHHHhhc
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITD-VDVQRLS----IARNLGADET-AKVS-TDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~-~~~~~~~----~~~~lg~~~~-~~~~-~~~~~~~~~~~~~~~~~  248 (361)
                      -.|.++||.| ++++|.+.++.+...|+ .|+.++ ++.++.+    .+++.+.... +..+ .+..+..+.+.++.+..
T Consensus        16 l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   94 (270)
T 3is3_A           16 LDGKVALVTGSGRGIGAAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHF   94 (270)
T ss_dssp             CTTCEEEESCTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3578899998 58999999998888999 455544 4444332    2233443321 2111 22334444444443322


Q ss_pred             CCCccEEEEccCCh----------H---------------HHHHHHHhhcCCCEEEEEccCC
Q 018075          249 GSGIDVSFDCVGFD----------K---------------TMSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       249 ~~~~d~vld~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~~  285 (361)
                       +++|+++++.|..          +               ..+.+.+.|..+|+++.++...
T Consensus        95 -g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~  155 (270)
T 3is3_A           95 -GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNT  155 (270)
T ss_dssp             -SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTT
T ss_pred             -CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCch
Confidence             4799999988742          1               3445666778899999987544

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=96.64  E-value=0.022  Score=49.19  Aligned_cols=81  Identities=23%  Similarity=0.278  Sum_probs=52.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HH---cCCCEE---eecCCCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN---LGADET---AKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~~---~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.++++.++.+.+ ++   .+....   .++ .+..+....+.++.+.. 
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~~-   79 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGA-KILLGARRQARIEAIATEIRDAGGTALAQVLDV-TDRHSVAAFAQAAVDTW-   79 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCEEEEEECCT-TCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCC-CCHHHHHHHHHHHHHHc-
Confidence            467899998 58999999998888999 688888887765433 22   243221   122 22334444444443322 


Q ss_pred             CCccEEEEccCC
Q 018075          250 SGIDVSFDCVGF  261 (361)
Q Consensus       250 ~~~d~vld~~g~  261 (361)
                      +++|+++++.|.
T Consensus        80 g~iD~lVnnAG~   91 (264)
T 3tfo_A           80 GRIDVLVNNAGV   91 (264)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999874

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=96.64  E-value=0.015  Score=50.38  Aligned_cols=105  Identities=20%  Similarity=0.278  Sum_probs=63.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEE-eCChhHHHHH----HHcCCCE-EeecC-CCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIIT-DVDVQRLSIA----RNLGADE-TAKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v-~~~~~~~~~~----~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      .+.++||.| +|++|.+.++.+...|++ |+.+ .++.++.+.+    ++.+... .+..+ .+..+..+.+.++.+.. 
T Consensus        26 ~~k~~lVTGas~GIG~aia~~la~~G~~-Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-  103 (267)
T 3u5t_A           26 TNKVAIVTGASRGIGAAIAARLASDGFT-VVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAF-  103 (267)
T ss_dssp             -CCEEEEESCSSHHHHHHHHHHHHHTCE-EEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            578999998 599999999988888995 5544 5555444322    3334332 11111 22333444444443322 


Q ss_pred             CCccEEEEccCCh----------H---------------HHHHHHHhhcCCCEEEEEccC
Q 018075          250 SGIDVSFDCVGFD----------K---------------TMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       250 ~~~d~vld~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      +++|+++++.|..          +               ..+.+.+.++.+|+++.++..
T Consensus       104 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~  163 (267)
T 3u5t_A          104 GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTS  163 (267)
T ss_dssp             SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCT
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeCh
Confidence            4799999998742          1               234455667778999988743

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.64  E-value=0.033  Score=46.70  Aligned_cols=93  Identities=10%  Similarity=0.069  Sum_probs=56.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh-hHH-HHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccE
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV-QRL-SIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV  254 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~-~~~-~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  254 (361)
                      -.|.+|||+|+|.+|...+..+...|++ |++++... +.. +++++.+...+ .     ..+...       .-.++|+
T Consensus        29 L~gk~VLVVGgG~va~~ka~~Ll~~GA~-VtVvap~~~~~l~~l~~~~~i~~i-~-----~~~~~~-------dL~~adL   94 (223)
T 3dfz_A           29 LKGRSVLVVGGGTIATRRIKGFLQEGAA-ITVVAPTVSAEINEWEAKGQLRVK-R-----KKVGEE-------DLLNVFF   94 (223)
T ss_dssp             CTTCCEEEECCSHHHHHHHHHHGGGCCC-EEEECSSCCHHHHHHHHTTSCEEE-C-----SCCCGG-------GSSSCSE
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEECCCCCHHHHHHHHcCCcEEE-E-----CCCCHh-------HhCCCCE
Confidence            3689999999999999999999999995 55554432 222 33333233322 1     111111       1257999


Q ss_pred             EEEccCChHHHHHHHHhhcCCCEEEEEccC
Q 018075          255 SFDCVGFDKTMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       255 vld~~g~~~~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      ||-+.+.+ ..+..+...+..|.++-+-..
T Consensus        95 VIaAT~d~-~~N~~I~~~ak~gi~VNvvD~  123 (223)
T 3dfz_A           95 IVVATNDQ-AVNKFVKQHIKNDQLVNMASS  123 (223)
T ss_dssp             EEECCCCT-HHHHHHHHHSCTTCEEEC---
T ss_pred             EEECCCCH-HHHHHHHHHHhCCCEEEEeCC
Confidence            99999987 455555555557776654433

>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18

Probab=96.63  E-value=0.014  Score=51.18  Aligned_cols=98  Identities=13%  Similarity=0.184  Sum_probs=67.4

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCC-EEeecCCCccchhHHHHHHHhhcC
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGAD-ETAKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      .++++.+||-+|||. |..+..+++..|. .+++++.++...+.+++    .|.. .+.....+..+..     +   ..
T Consensus        79 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~---~~  148 (297)
T 2o57_A           79 VLQRQAKGLDLGAGY-GGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP-----C---ED  148 (297)
T ss_dssp             CCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS-----S---CT
T ss_pred             CCCCCCEEEEeCCCC-CHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCC-----C---CC
Confidence            788999999999875 8888888888788 79999999987766654    2321 1111111111110     0   13


Q ss_pred             CCccEEEEccCC------hHHHHHHHHhhcCCCEEEEEc
Q 018075          250 SGIDVSFDCVGF------DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       250 ~~~d~vld~~g~------~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ..||+|+....-      ...++.+.+.|+|||+++...
T Consensus       149 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~  187 (297)
T 2o57_A          149 NSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITD  187 (297)
T ss_dssp             TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEE
Confidence            579999875331      246888999999999999875

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=96.63  E-value=0.013  Score=50.17  Aligned_cols=81  Identities=21%  Similarity=0.295  Sum_probs=53.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcCCCE-E--eecCCCccchhHHHHHHHhhcCCCc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADE-T--AKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      .|.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ ++++... .  .++ .+..+..+.+.++.+.. +++
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-~d~~~v~~~~~~~~~~~-g~i   84 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGA-KVIGTATSESGAQAISDYLGDNGKGMALNV-TNPESIEAVLKAITDEF-GGV   84 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCT-TCHHHHHHHHHHHHHHH-CCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceEEEEeC-CCHHHHHHHHHHHHHHc-CCC
Confidence            578899998 69999999998888999 688888888765543 3344221 1  222 22334444444443322 479


Q ss_pred             cEEEEccCC
Q 018075          253 DVSFDCVGF  261 (361)
Q Consensus       253 d~vld~~g~  261 (361)
                      |+++++.|.
T Consensus        85 D~lv~nAg~   93 (248)
T 3op4_A           85 DILVNNAGI   93 (248)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999874

>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53

Probab=96.62  E-value=0.019  Score=47.78  Aligned_cols=98  Identities=17%  Similarity=0.110  Sum_probs=65.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhhcCCCc
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      .++++||-+|||. |..++.+++......+++++.+++..+.+++    .+...+.....+..++...   +   ....+
T Consensus        40 ~~~~~vLDiGcG~-G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~---~---~~~~~  112 (214)
T 1yzh_A           40 NDNPIHVEVGSGK-GAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDY---F---EDGEI  112 (214)
T ss_dssp             SCCCEEEEESCTT-SHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGT---S---CTTCC
T ss_pred             CCCCeEEEEccCc-CHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhh---c---CCCCC
Confidence            4678899899876 8888889988743489999999987776654    3433322222222222110   1   13569


Q ss_pred             cEEEEccCC--------------hHHHHHHHHhhcCCCEEEEE
Q 018075          253 DVSFDCVGF--------------DKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       253 d~vld~~g~--------------~~~~~~~~~~l~~~G~~v~~  281 (361)
                      |+|+-....              ...+..+.+.|+|||.++..
T Consensus       113 D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  155 (214)
T 1yzh_A          113 DRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFK  155 (214)
T ss_dssp             SEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEE
T ss_pred             CEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEE
Confidence            999876554              24788899999999998774

>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A

Probab=96.62  E-value=0.0086  Score=52.14  Aligned_cols=104  Identities=14%  Similarity=0.191  Sum_probs=66.6

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhhc
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      .++++|++||-+|||+ |..++++++.+ +...|++++.++++.+.+++    .|...+....   .+.......+. ..
T Consensus        79 l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~---~D~~~~~~~~~-~~  153 (274)
T 3ajd_A           79 LNPREDDFILDMCAAP-GGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIIN---ADMRKYKDYLL-KN  153 (274)
T ss_dssp             HCCCTTCEEEETTCTT-CHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEE---SCHHHHHHHHH-HT
T ss_pred             hCCCCcCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEe---CChHhcchhhh-hc
Confidence            4678999999888766 66777788765 43589999999998776654    4654332222   23322221110 01


Q ss_pred             CCCccEEEE---ccCC---------------------hHHHHHHHHhhcCCCEEEEEc
Q 018075          249 GSGIDVSFD---CVGF---------------------DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       249 ~~~~d~vld---~~g~---------------------~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ...||+|+-   |.+.                     ...++.+++.|+|||+++...
T Consensus       154 ~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~st  211 (274)
T 3ajd_A          154 EIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYST  211 (274)
T ss_dssp             TCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence            457999975   3331                     236777888999999998753

>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*

Probab=96.61  E-value=0.013  Score=49.48  Aligned_cols=100  Identities=11%  Similarity=0.111  Sum_probs=61.0

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHH----HHHHcCCCEEeecCCCccchhHHHHHHHhhc
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLS----IARNLGADETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~----~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      ..+++|++||=+|||+ |..+..+++..| -..|++++.++...+    .+++..  .+.....+..... ...    ..
T Consensus        72 ~~l~~g~~VLDlG~Gt-G~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~--nv~~i~~Da~~~~-~~~----~~  143 (232)
T 3id6_C           72 NPIRKGTKVLYLGAAS-GTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRP--NIFPLLADARFPQ-SYK----SV  143 (232)
T ss_dssp             CSCCTTCEEEEETCTT-SHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCT--TEEEEECCTTCGG-GTT----TT
T ss_pred             cCCCCCCEEEEEeecC-CHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcC--CeEEEEcccccch-hhh----cc
Confidence            5689999999999876 667788888765 337999999997642    333321  1111111111110 000    01


Q ss_pred             CCCccEEEEccCChHH---HH-HHHHhhcCCCEEEEE
Q 018075          249 GSGIDVSFDCVGFDKT---MS-TALNATRPGGKVCLI  281 (361)
Q Consensus       249 ~~~~d~vld~~g~~~~---~~-~~~~~l~~~G~~v~~  281 (361)
                      ...+|+||-....+..   +. .+.+.|+|||+++..
T Consensus       144 ~~~~D~I~~d~a~~~~~~il~~~~~~~LkpGG~lvis  180 (232)
T 3id6_C          144 VENVDVLYVDIAQPDQTDIAIYNAKFFLKVNGDMLLV  180 (232)
T ss_dssp             CCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ccceEEEEecCCChhHHHHHHHHHHHhCCCCeEEEEE
Confidence            3579999876654422   22 233489999999876

>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1

Probab=96.61  E-value=0.0051  Score=54.66  Aligned_cols=93  Identities=22%  Similarity=0.249  Sum_probs=64.5

Q ss_pred             CEEEEECCCHHHHHHHHHH-H-HcCCCEEEEEeCChhH--HHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          180 TNVMIMGSGPIGLVTLLAA-R-AFGAPRIIITDVDVQR--LSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       180 ~~vlI~G~g~~G~~ai~la-~-~~g~~~vv~v~~~~~~--~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      -+|.|+|+|.+|...+..+ + .-+++.+.+++.++++  .++++++|.....      .+..+.+   ......++|+|
T Consensus         5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~------~~~e~ll---~~~~~~~iDvV   75 (312)
T 1nvm_B            5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY------AGVEGLI---KLPEFADIDFV   75 (312)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES------SHHHHHH---HSGGGGGEEEE
T ss_pred             CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCccc------CCHHHHH---hccCCCCCcEE
Confidence            4789999999999888877 4 3466556666777665  6777888864211      1222221   11123579999


Q ss_pred             EEccCChHHHHHHHHhhcC--CCEEEEE
Q 018075          256 FDCVGFDKTMSTALNATRP--GGKVCLI  281 (361)
Q Consensus       256 ld~~g~~~~~~~~~~~l~~--~G~~v~~  281 (361)
                      |++++...+.+.+...+..  |.++++.
T Consensus        76 ~~atp~~~h~~~a~~al~a~~Gk~Vi~e  103 (312)
T 1nvm_B           76 FDATSASAHVQNEALLRQAKPGIRLIDL  103 (312)
T ss_dssp             EECSCHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             EECCChHHHHHHHHHHHHhCCCCEEEEc
Confidence            9999987788888888887  8887764

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=96.61  E-value=0.022  Score=49.15  Aligned_cols=81  Identities=27%  Similarity=0.398  Sum_probs=53.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HH----cCCCE-E--eecCCCccchhHHHHHHHhhc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN----LGADE-T--AKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~----lg~~~-~--~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      .|.++||.| +|++|.+.++.+...|+ .|+.++++.++.+.+ ++    .+... .  .++ .+..+..+.+.++.+..
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~~   96 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGA-RLVLSGRDVSELDAARRALGEQFGTDVHTVAIDL-AEPDAPAELARRAAEAF   96 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT-TSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecC-CCHHHHHHHHHHHHHHc
Confidence            578899998 59999999998888999 688888887765432 22    34322 1  222 23344445555444322


Q ss_pred             CCCccEEEEccCC
Q 018075          249 GSGIDVSFDCVGF  261 (361)
Q Consensus       249 ~~~~d~vld~~g~  261 (361)
                       +++|+++++.|.
T Consensus        97 -g~id~lv~nAg~  108 (266)
T 4egf_A           97 -GGLDVLVNNAGI  108 (266)
T ss_dssp             -TSCSEEEEECCC
T ss_pred             -CCCCEEEECCCc
Confidence             479999998874

>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*

Probab=96.60  E-value=0.0091  Score=50.67  Aligned_cols=105  Identities=15%  Similarity=0.186  Sum_probs=70.2

Q ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc----CCCEEeecCCCccchhHHHHHH
Q 018075          169 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKI  244 (361)
Q Consensus       169 ~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~  244 (361)
                      ..+...+++++.+||-+|||. |..+..+++.. . .+++++.+++..+.+++.    +...+.....+..++.      
T Consensus        12 ~~~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~-~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~------   82 (239)
T 1xxl_A           12 LMIKTAECRAEHRVLDIGAGA-GHTALAFSPYV-Q-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP------   82 (239)
T ss_dssp             HHHHHHTCCTTCEEEEESCTT-SHHHHHHGGGS-S-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC------
T ss_pred             hHHHHhCcCCCCEEEEEccCc-CHHHHHHHHhC-C-EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCC------
Confidence            345567789999999999877 77777777654 4 799999999877766542    3322211111111110      


Q ss_pred             HhhcCCCccEEEEccCC------hHHHHHHHHhhcCCCEEEEEccC
Q 018075          245 QNAMGSGIDVSFDCVGF------DKTMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       245 ~~~~~~~~d~vld~~g~------~~~~~~~~~~l~~~G~~v~~g~~  284 (361)
                        .....||+|+....-      ...+..+.+.|+|||+++.....
T Consensus        83 --~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~  126 (239)
T 1xxl_A           83 --FPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHY  126 (239)
T ss_dssp             --SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred             --CCCCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcC
Confidence              113579999976321      24678899999999999987543

>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17

Probab=96.60  E-value=0.005  Score=53.69  Aligned_cols=97  Identities=13%  Similarity=0.115  Sum_probs=66.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc------CC--CEEeecCCCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL------GA--DETAKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l------g~--~~~~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      .+.+||++|+|. |..+..+++..+...+++++.+++-.+.+++.      +.  ..+....   .|..+.+..    ..
T Consensus        75 ~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~---~D~~~~l~~----~~  146 (275)
T 1iy9_A           75 NPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQV---DDGFMHIAK----SE  146 (275)
T ss_dssp             SCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEE---SCSHHHHHT----CC
T ss_pred             CCCEEEEECCch-HHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEE---CcHHHHHhh----CC
Confidence            568999999775 67777888776766899999999988888763      11  1111111   233233321    24


Q ss_pred             CCccEEEEccCC----------hHHHHHHHHhhcCCCEEEEEc
Q 018075          250 SGIDVSFDCVGF----------DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       250 ~~~d~vld~~g~----------~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ..||+|+-....          .+.++.+.+.|+|+|.++.-.
T Consensus       147 ~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~  189 (275)
T 1iy9_A          147 NQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT  189 (275)
T ss_dssp             SCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence            679999875432          357899999999999998763

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=96.59  E-value=0.014  Score=49.26  Aligned_cols=98  Identities=13%  Similarity=0.153  Sum_probs=63.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  256 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  256 (361)
                      .|.+|||.| +|.+|...+..+...|. .|+++++++++.+.+...++...+..+-. ..+.+    .    -.++|+|+
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~-~~~~~----~----~~~~D~vi   89 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGH-EPVAMVRNEEQGPELRERGASDIVVANLE-EDFSH----A----FASIDAVV   89 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHTTCSEEEECCTT-SCCGG----G----GTTCSEEE
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCC-eEEEEECChHHHHHHHhCCCceEEEcccH-HHHHH----H----HcCCCEEE
Confidence            578999999 59999999998888998 68888898888877776666222222111 12211    1    24799999


Q ss_pred             EccCChH-------------HHHHHHHhhc--CCCEEEEEccCC
Q 018075          257 DCVGFDK-------------TMSTALNATR--PGGKVCLIGLAK  285 (361)
Q Consensus       257 d~~g~~~-------------~~~~~~~~l~--~~G~~v~~g~~~  285 (361)
                      ++.|...             ....+++.+.  ..++++.++...
T Consensus        90 ~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~  133 (236)
T 3e8x_A           90 FAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVG  133 (236)
T ss_dssp             ECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTT
T ss_pred             ECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCC
Confidence            9988531             1222333332  347899887544

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=96.59  E-value=0.011  Score=51.00  Aligned_cols=105  Identities=15%  Similarity=0.238  Sum_probs=62.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCh---hHHH-HHHHc---CCCE-EeecC-CCccchhHHHHHHHhh
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDV---QRLS-IARNL---GADE-TAKVS-TDIEDVDTDVGKIQNA  247 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~---~~~~-~~~~l---g~~~-~~~~~-~~~~~~~~~~~~~~~~  247 (361)
                      .|.++||.| ++++|.+.++.+...|+ .|+.+++..   ++.+ ..+++   +... .+..+ .+..+..+.+.++.+.
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   88 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESV-NLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKE   88 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSC-EEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            578899998 59999999998888999 566665433   2222 22222   3221 11111 2233444444444332


Q ss_pred             cCCCccEEEEccCCh----------H---------------HHHHHHHhhcCCCEEEEEccC
Q 018075          248 MGSGIDVSFDCVGFD----------K---------------TMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       248 ~~~~~d~vld~~g~~----------~---------------~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      . +++|+++++.|..          +               ..+.+.+.|+++|+++.++..
T Consensus        89 ~-g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~  149 (262)
T 3ksu_A           89 F-GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATS  149 (262)
T ss_dssp             H-CSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCC
T ss_pred             c-CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEech
Confidence            2 4799999998832          1               223334455677999988643

>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}

Probab=96.59  E-value=0.016  Score=51.04  Aligned_cols=109  Identities=18%  Similarity=0.205  Sum_probs=69.2

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEeCChhHHHHHHHc-----C-CCEEeecCCCccchhHHHHH
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARNL-----G-ADETAKVSTDIEDVDTDVGK  243 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~l-----g-~~~~~~~~~~~~~~~~~~~~  243 (361)
                      +.....+++.+||-+|||. |..+..+++.. ....|++++.++...+.+++.     + ...+.-...+..++...  .
T Consensus        29 l~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~--~  105 (299)
T 3g5t_A           29 IDEYHDGERKLLVDVGCGP-GTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFL--G  105 (299)
T ss_dssp             HHHHCCSCCSEEEEETCTT-THHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGG--C
T ss_pred             HHHHhcCCCCEEEEECCCC-CHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCcc--c
Confidence            3333346899999999986 88999999875 455899999999888777664     1 11111111111121100  0


Q ss_pred             HHhhcCCCccEEEEccCC-----hHHHHHHHHhhcCCCEEEEEc
Q 018075          244 IQNAMGSGIDVSFDCVGF-----DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       244 ~~~~~~~~~d~vld~~g~-----~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ........||+|+....-     ...++.+.+.|+|||.++...
T Consensus       106 ~~~~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i~~  149 (299)
T 3g5t_A          106 ADSVDKQKIDMITAVECAHWFDFEKFQRSAYANLRKDGTIAIWG  149 (299)
T ss_dssp             TTTTTSSCEEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccccCCCeeEEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEEEe
Confidence            000002579999875431     357888999999999998854

>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}

Probab=96.58  E-value=0.016  Score=50.11  Aligned_cols=103  Identities=17%  Similarity=0.215  Sum_probs=69.5

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc----CCC-EEeecCCCccchhHHHHHHH
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GAD-ETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~-~~~~~~~~~~~~~~~~~~~~  245 (361)
                      ++...++++++||-+|||. |..+..+++..+. .+++++.+++..+.+++.    |.. .+.....+..+..       
T Consensus        54 ~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-------  124 (273)
T 3bus_A           54 IALLDVRSGDRVLDVGCGI-GKPAVRLATARDV-RVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLP-------  124 (273)
T ss_dssp             HHHSCCCTTCEEEEESCTT-SHHHHHHHHHSCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-------
T ss_pred             HHhcCCCCCCEEEEeCCCC-CHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCC-------
Confidence            4557788999999999886 8888889988887 799999999877766553    322 1111111111110       


Q ss_pred             hhcCCCccEEEEcc-----C-ChHHHHHHHHhhcCCCEEEEEcc
Q 018075          246 NAMGSGIDVSFDCV-----G-FDKTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       246 ~~~~~~~d~vld~~-----g-~~~~~~~~~~~l~~~G~~v~~g~  283 (361)
                       .....||+|+...     . ....++.+.+.|+|||+++....
T Consensus       125 -~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~  167 (273)
T 3bus_A          125 -FEDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADF  167 (273)
T ss_dssp             -SCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred             -CCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEe
Confidence             0135799998632     1 22467888899999999987653

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=96.58  E-value=0.033  Score=47.59  Aligned_cols=106  Identities=19%  Similarity=0.191  Sum_probs=61.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCh--hHHHHHHHc--CCC-EEeecC-CCc-cchhHHHHHHHhhcC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDV--QRLSIARNL--GAD-ETAKVS-TDI-EDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~--~~~~~~~~l--g~~-~~~~~~-~~~-~~~~~~~~~~~~~~~  249 (361)
                      ++.++||.| +|++|.+.++.+...|++.|+.++++.  +..+.+.+.  +.. ..+..+ .+. .+..+.+.++.+.. 
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-   82 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL-   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH-
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhc-
Confidence            467899998 699999999988889996466676664  333333332  211 112111 122 23444444443322 


Q ss_pred             CCccEEEEccCCh--H---------------HHHHHHHhhcC-----CCEEEEEccC
Q 018075          250 SGIDVSFDCVGFD--K---------------TMSTALNATRP-----GGKVCLIGLA  284 (361)
Q Consensus       250 ~~~d~vld~~g~~--~---------------~~~~~~~~l~~-----~G~~v~~g~~  284 (361)
                      +++|+++++.|..  +               ..+.+.+.+..     +|+++.++..
T Consensus        83 g~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~  139 (254)
T 1sby_A           83 KTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSV  139 (254)
T ss_dssp             SCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCG
T ss_pred             CCCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECch
Confidence            4799999998732  1               23334444432     5889988753

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.56  E-value=0.019  Score=48.88  Aligned_cols=81  Identities=25%  Similarity=0.343  Sum_probs=53.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcCCCEE-eecCCCccchhHHHHHHHhhcCCCccE
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDV  254 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~  254 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ +++++..+ .++ .+..+..+.+.++.+.. +++|+
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~-~~~~~~~~~~~~~~~~~-g~id~   80 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGAHPVVMDV-ADPASVERGFAEALAHL-GRLDG   80 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTCEEEECCT-TCHHHHHHHHHHHHHHH-SSCCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCEEEEecC-CCHHHHHHHHHHHHHHc-CCCCE
Confidence            467899998 59999999998888999 678888887766543 44553222 122 22233444444433322 47999


Q ss_pred             EEEccCC
Q 018075          255 SFDCVGF  261 (361)
Q Consensus       255 vld~~g~  261 (361)
                      ++++.|.
T Consensus        81 lvn~Ag~   87 (245)
T 1uls_A           81 VVHYAGI   87 (245)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999873

>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*

Probab=96.56  E-value=0.006  Score=53.38  Aligned_cols=95  Identities=14%  Similarity=0.167  Sum_probs=65.3

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcC-----C---------CEEeecCCCccchhHHHH
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG-----A---------DETAKVSTDIEDVDTDVG  242 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg-----~---------~~~~~~~~~~~~~~~~~~  242 (361)
                      .++.+||++|+|. |..+..+++. +...+++++.+++..+.+++.-     .         ..+....   .+..+.+.
T Consensus        74 ~~~~~VLdiG~G~-G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~---~D~~~~l~  148 (281)
T 1mjf_A           74 PKPKRVLVIGGGD-GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTI---GDGFEFIK  148 (281)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEE---SCHHHHHH
T ss_pred             CCCCeEEEEcCCc-CHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEE---CchHHHhc
Confidence            4678999999876 7777788887 7768999999999888887631     1         1111111   23322222


Q ss_pred             HHHhhcCCCccEEEEccC----------ChHHHHHHHHhhcCCCEEEEE
Q 018075          243 KIQNAMGSGIDVSFDCVG----------FDKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       243 ~~~~~~~~~~d~vld~~g----------~~~~~~~~~~~l~~~G~~v~~  281 (361)
                      .     ...||+|+-...          ....++.+.+.|+|+|.++..
T Consensus       149 ~-----~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~  192 (281)
T 1mjf_A          149 N-----NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQ  192 (281)
T ss_dssp             H-----CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred             c-----cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence            1     467999986443          234688899999999999875

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=96.55  E-value=0.033  Score=48.35  Aligned_cols=83  Identities=18%  Similarity=0.267  Sum_probs=53.2

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCC-EEeecC-CCccchhHHHHHHHhhcCCCc
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGAD-ETAKVS-TDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      ..+.++||.| +|++|.+.+..+...|+ .|+.++++.++.+ .+++++.. ..+..+ .+..+..+.+.++.+.. +++
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~i  103 (272)
T 4dyv_A           26 TGKKIAIVTGAGSGVGRAVAVALAGAGY-GVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKF-GRV  103 (272)
T ss_dssp             --CCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHH-SCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHc-CCC
Confidence            3567889998 59999999998888999 6888888877654 44455522 122211 22334444444443322 479


Q ss_pred             cEEEEccCC
Q 018075          253 DVSFDCVGF  261 (361)
Q Consensus       253 d~vld~~g~  261 (361)
                      |+++++.|.
T Consensus       104 D~lVnnAg~  112 (272)
T 4dyv_A          104 DVLFNNAGT  112 (272)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999998874

>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*

Probab=96.54  E-value=0.0057  Score=52.49  Aligned_cols=99  Identities=11%  Similarity=0.112  Sum_probs=66.3

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHh--hcC
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQN--AMG  249 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~--~~~  249 (361)
                      ..++.+||=+|||+ |..++.+++......|+++|.+++..+.+++    +|...+..+..   +..+    +..  ...
T Consensus        78 ~~~~~~vLDiG~G~-G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~---d~~~----~~~~~~~~  149 (249)
T 3g89_A           78 WQGPLRVLDLGTGA-GFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWG---RAEV----LAREAGHR  149 (249)
T ss_dssp             CCSSCEEEEETCTT-TTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEEC---CHHH----HTTSTTTT
T ss_pred             cCCCCEEEEEcCCC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEEC---cHHH----hhcccccC
Confidence            36789999999876 7777888887654489999999998777654    46543322222   2211    111  012


Q ss_pred             CCccEEEEccCC--hHHHHHHHHhhcCCCEEEEEc
Q 018075          250 SGIDVSFDCVGF--DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       250 ~~~d~vld~~g~--~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ..||+|+...-.  +..++.+.+.|++||+++.+-
T Consensus       150 ~~fD~I~s~a~~~~~~ll~~~~~~LkpgG~l~~~~  184 (249)
T 3g89_A          150 EAYARAVARAVAPLCVLSELLLPFLEVGGAAVAMK  184 (249)
T ss_dssp             TCEEEEEEESSCCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             CCceEEEECCcCCHHHHHHHHHHHcCCCeEEEEEe
Confidence            579999974332  245677788999999998764

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=96.54  E-value=0.0028  Score=54.06  Aligned_cols=101  Identities=19%  Similarity=0.266  Sum_probs=63.4

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCE-EeecCCCccchhHHHHHHHhhcCCCccE
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE-TAKVSTDIEDVDTDVGKIQNAMGSGIDV  254 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~  254 (361)
                      -+|+++||.| ++++|.+.++.+...|+ .|+.+++++++.+....-.+.. ..+. ++.++.    +++.+. -+++|+
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga-~Vv~~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~v----~~~~~~-~g~iDi   81 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGA-EVVALGLDADGVHAPRHPRIRREELDI-TDSQRL----QRLFEA-LPRLDV   81 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTSTTSCCCTTEEEEECCT-TCHHHH----HHHHHH-CSCCSE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHhhhhcCCeEEEEecC-CCHHHH----HHHHHh-cCCCCE
Confidence            4699999998 58999999999999999 6888888876654322211111 1122 222223    222222 257999


Q ss_pred             EEEccCCh--------H---------------HHHHHHHhhc-CCCEEEEEccC
Q 018075          255 SFDCVGFD--------K---------------TMSTALNATR-PGGKVCLIGLA  284 (361)
Q Consensus       255 vld~~g~~--------~---------------~~~~~~~~l~-~~G~~v~~g~~  284 (361)
                      ++++.|..        +               ..+...+.|+ .+|++|.++..
T Consensus        82 LVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~  135 (242)
T 4b79_A           82 LVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASM  135 (242)
T ss_dssp             EEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCG
T ss_pred             EEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeec
Confidence            99998743        1               2233444453 57999988743

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=96.53  E-value=0.041  Score=47.53  Aligned_cols=83  Identities=22%  Similarity=0.293  Sum_probs=54.7

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCCEE-eecC-CCccchhHHHHHHHhhcCCCc
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADET-AKVS-TDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      -.|.++||.| +|++|.+.++.+...|+ .|+.++++.++.+ .+++++.... +..+ .+..+..+.+.++.+. .+++
T Consensus        25 l~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g~i  102 (266)
T 3grp_A           25 LTGRKALVTGATGGIGEAIARCFHAQGA-IVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAERE-MEGI  102 (266)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHH-HTSC
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHH-cCCC
Confidence            3578999998 59999999998888999 6788888877654 4455664322 1111 2223344444443332 2479


Q ss_pred             cEEEEccCC
Q 018075          253 DVSFDCVGF  261 (361)
Q Consensus       253 d~vld~~g~  261 (361)
                      |+++++.|.
T Consensus       103 D~lvnnAg~  111 (266)
T 3grp_A          103 DILVNNAGI  111 (266)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999885

>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}

Probab=96.53  E-value=0.017  Score=52.32  Aligned_cols=131  Identities=17%  Similarity=0.164  Sum_probs=83.9

Q ss_pred             CEEEEECCCHHHHHHHHHHHHc-CCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEc
Q 018075          180 TNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  258 (361)
Q Consensus       180 ~~vlI~G~g~~G~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  258 (361)
                      -+|.|+|+|.+|...+..++.. +++.+.+++.++++.+.++++|+..   +    .++.+.+.      ...+|+|+.|
T Consensus         6 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~~g~~~---~----~~~~~ll~------~~~~D~V~i~   72 (359)
T 3e18_A            6 YQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQKGLKI---Y----ESYEAVLA------DEKVDAVLIA   72 (359)
T ss_dssp             EEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHTTTCCB---C----SCHHHHHH------CTTCCEEEEC
T ss_pred             CcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHhcCCce---e----CCHHHHhc------CCCCCEEEEc
Confidence            4789999999998877777666 6644445688888888887777632   2    23333322      3579999999


Q ss_pred             cCChHHHHHHHHhhcCCCEEEEEccCCCCcceechH----hhhcCcEE-EEeec-CCCcHHHHHHHHHcCCC
Q 018075          259 VGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTP----AAAREVDV-IGIFR-YRSTWPLCIEFLRSGKI  324 (361)
Q Consensus       259 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~----~~~~~~~i-~~~~~-~~~~~~~~~~~l~~g~~  324 (361)
                      +....+.+.+..+|..|-.+ ++.-+.....-....    .-.+++.+ .+... +...++.+.+++++|.+
T Consensus        73 tp~~~h~~~~~~al~aGkhV-l~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~i  143 (359)
T 3e18_A           73 TPNDSHKELAISALEAGKHV-VCEKPVTMTSEDLLAIMDVAKRVNKHFMVHQNRRWDEDFLIIKEMFEQKTI  143 (359)
T ss_dssp             SCGGGHHHHHHHHHHTTCEE-EEESSCCSSHHHHHHHHHHHHHHTCCEEEECGGGGCHHHHHHHHHHHHTTT
T ss_pred             CCcHHHHHHHHHHHHCCCCE-EeeCCCcCCHHHHHHHHHHHHHhCCeEEEEeeeccCHHHHHHHHHHHcCCC
Confidence            99888888899999876554 454322111111111    11223333 23322 35678889999999887

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=96.52  E-value=0.024  Score=48.54  Aligned_cols=82  Identities=16%  Similarity=0.259  Sum_probs=52.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HHHcCCCE-EeecC-CCccchhHHHHHHHhhcCCCcc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+. .++++... .+..+ .+..+..+.+.++.+.. +++|
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~id   82 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRL-GTLN   82 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHH-CSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence            467899998 59999999998888999 68888888776543 34454322 11111 22233334444433222 4699


Q ss_pred             EEEEccCC
Q 018075          254 VSFDCVGF  261 (361)
Q Consensus       254 ~vld~~g~  261 (361)
                      +++++.|.
T Consensus        83 ~lv~~Ag~   90 (253)
T 1hxh_A           83 VLVNNAGI   90 (253)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999874

>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}

Probab=96.52  E-value=0.0073  Score=56.67  Aligned_cols=104  Identities=19%  Similarity=0.251  Sum_probs=68.4

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHh
Q 018075          172 RRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQN  246 (361)
Q Consensus       172 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~  246 (361)
                      ...++++|++||-+|||+ |..+.++++.++. ..+++++.++.+.+.+++    +|...+.....+..++..   .+  
T Consensus       253 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~---~~--  326 (450)
T 2yxl_A          253 IVLDPKPGETVVDLAAAP-GGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPE---II--  326 (450)
T ss_dssp             HHHCCCTTCEEEESSCTT-CHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSS---SS--
T ss_pred             HhcCCCCcCEEEEeCCCc-cHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcch---hh--
Confidence            345689999999998877 7777788887753 479999999998876654    465433222222111110   01  


Q ss_pred             hcCCCccEEEE---ccCC-------------------------hHHHHHHHHhhcCCCEEEEEc
Q 018075          247 AMGSGIDVSFD---CVGF-------------------------DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       247 ~~~~~~d~vld---~~g~-------------------------~~~~~~~~~~l~~~G~~v~~g  282 (361)
                       .+..||.|+-   |+|.                         ...+..+.+.|+|||+++...
T Consensus       327 -~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~t  389 (450)
T 2yxl_A          327 -GEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTT  389 (450)
T ss_dssp             -CSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             -ccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence             1256999985   4332                         235777888999999998653

>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}

Probab=96.51  E-value=0.0074  Score=50.79  Aligned_cols=98  Identities=22%  Similarity=0.388  Sum_probs=66.1

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCC-EEeecCCCccchhHHHHHHHhhc
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGAD-ETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      ..++++++||-+|||..|..++.+++..+. .|++++.+++..+.+++    .+.. .++.  .+...+.    .+   .
T Consensus        51 ~~~~~~~~vLDlG~G~~G~~~~~la~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~--~d~~~~~----~~---~  120 (230)
T 3evz_A           51 TFLRGGEVALEIGTGHTAMMALMAEKFFNC-KVTATEVDEEFFEYARRNIERNNSNVRLVK--SNGGIIK----GV---V  120 (230)
T ss_dssp             TTCCSSCEEEEECCTTTCHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHTTCCCEEEE--CSSCSST----TT---C
T ss_pred             hhcCCCCEEEEcCCCHHHHHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHHhCCCcEEEe--CCchhhh----hc---c
Confidence            446899999999998558888888887766 79999999988777654    3431 1221  1110111    01   1


Q ss_pred             CCCccEEEEccCC-------------------------hHHHHHHHHhhcCCCEEEEE
Q 018075          249 GSGIDVSFDCVGF-------------------------DKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       249 ~~~~d~vld~~g~-------------------------~~~~~~~~~~l~~~G~~v~~  281 (361)
                      ...||+|+....-                         ...++.+.+.|+|||+++.+
T Consensus       121 ~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  178 (230)
T 3evz_A          121 EGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALY  178 (230)
T ss_dssp             CSCEEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred             cCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEE
Confidence            3679999964210                         34677788899999999875

>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}

Probab=96.51  E-value=0.005  Score=52.84  Aligned_cols=102  Identities=19%  Similarity=0.159  Sum_probs=70.5

Q ss_pred             HHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEeCChhHHHHHHHcCCC-EEeecCCCccchhHHHHHHH
Q 018075          168 VHACRRANVGPETNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARNLGAD-ETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       168 ~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~  245 (361)
                      ...+.....+++.+||-+|||. |..+..+++.. +. .+++++.+++..+.+++.... ..+.  .   +...    +.
T Consensus        23 ~~l~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~--~---d~~~----~~   91 (259)
T 2p35_A           23 RDLLAQVPLERVLNGYDLGCGP-GNSTELLTDRYGVN-VITGIDSDDDMLEKAADRLPNTNFGK--A---DLAT----WK   91 (259)
T ss_dssp             HHHHTTCCCSCCSSEEEETCTT-THHHHHHHHHHCTT-SEEEEESCHHHHHHHHHHSTTSEEEE--C---CTTT----CC
T ss_pred             HHHHHhcCCCCCCEEEEecCcC-CHHHHHHHHhCCCC-EEEEEECCHHHHHHHHHhCCCcEEEE--C---Chhh----cC
Confidence            3445556678899999999875 77888888876 45 699999999988888775321 1221  1   1111    10


Q ss_pred             hhcCCCccEEEEccC------ChHHHHHHHHhhcCCCEEEEEc
Q 018075          246 NAMGSGIDVSFDCVG------FDKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       246 ~~~~~~~d~vld~~g------~~~~~~~~~~~l~~~G~~v~~g  282 (361)
                        ....||+|+....      ....+..+.+.|+|||+++...
T Consensus        92 --~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~  132 (259)
T 2p35_A           92 --PAQKADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQM  132 (259)
T ss_dssp             --CSSCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             --ccCCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEe
Confidence              1457999998542      1346778889999999998764

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=96.50  E-value=0.032  Score=48.08  Aligned_cols=105  Identities=15%  Similarity=0.196  Sum_probs=63.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HHHcCC-----C-EEeecC-CCccchhHHHHHHHhhc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLGA-----D-ETAKVS-TDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~-----~-~~~~~~-~~~~~~~~~~~~~~~~~  248 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.++++.++.+. .+++..     . ..+..+ .+..+..+.+.++.+..
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            567899998 59999999998888999 67888888766543 233321     1 111111 22233444444433222


Q ss_pred             CCCccEEEEccCCh--H---------------HHHHHHHhhcC-----CCEEEEEccC
Q 018075          249 GSGIDVSFDCVGFD--K---------------TMSTALNATRP-----GGKVCLIGLA  284 (361)
Q Consensus       249 ~~~~d~vld~~g~~--~---------------~~~~~~~~l~~-----~G~~v~~g~~  284 (361)
                       +++|+++++.|..  +               ..+.+++.+..     .|+++.++..
T Consensus        85 -g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~  141 (267)
T 2gdz_A           85 -GRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSL  141 (267)
T ss_dssp             -SCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCG
T ss_pred             -CCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCc
Confidence             4799999998742  1               22334455543     6899988743

>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}

Probab=96.50  E-value=0.0034  Score=55.28  Aligned_cols=45  Identities=27%  Similarity=0.352  Sum_probs=38.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL  222 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l  222 (361)
                      .++.+||-+|||. |..++.+++..+...|+++|.++.-.+.+++.
T Consensus        45 ~~~~~VLDiGCG~-G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~   89 (292)
T 3g07_A           45 FRGRDVLDLGCNV-GHLTLSIACKWGPSRMVGLDIDSRLIHSARQN   89 (292)
T ss_dssp             TTTSEEEEESCTT-CHHHHHHHHHTCCSEEEEEESCHHHHHHHHHT
T ss_pred             cCCCcEEEeCCCC-CHHHHHHHHHcCCCEEEEECCCHHHHHHHHHH
Confidence            4688999999886 88899999998666899999999888877764

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=96.49  E-value=0.02  Score=49.21  Aligned_cols=104  Identities=18%  Similarity=0.265  Sum_probs=62.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEE-eCChhHHHH----HHHcCCC-EEeecC-CCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIIT-DVDVQRLSI----ARNLGAD-ETAKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v-~~~~~~~~~----~~~lg~~-~~~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      .|.++||.| +|++|.+.++.+...|++ |+.+ +++.++.+.    +++.+.. ..+..+ .+..+..+.+.++.+.. 
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   84 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGAN-VVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKF-   84 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCE-EEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh-
Confidence            578999998 589999999988889994 5555 555554332    2333432 122211 22333444444443322 


Q ss_pred             CCccEEEEccCCh-----------H---------------HHHHHHHhhcCCCEEEEEcc
Q 018075          250 SGIDVSFDCVGFD-----------K---------------TMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       250 ~~~d~vld~~g~~-----------~---------------~~~~~~~~l~~~G~~v~~g~  283 (361)
                      +++|+++++.|..           +               ..+.+.+.+.++|+++.++.
T Consensus        85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS  144 (259)
T 3edm_A           85 GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSS  144 (259)
T ss_dssp             CSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred             CCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcC
Confidence            4799999988632           1               22333445556789998864

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=96.49  E-value=0.034  Score=50.15  Aligned_cols=81  Identities=26%  Similarity=0.327  Sum_probs=52.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhH-----------HHHHHHcCCCEE-e--ecCCCccchhHHHH
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQR-----------LSIARNLGADET-A--KVSTDIEDVDTDVG  242 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~-----------~~~~~~lg~~~~-~--~~~~~~~~~~~~~~  242 (361)
                      .|.++||.| ++++|.+.+..+...|+ .|+.++++.++           .+.+++.+.... +  |+ .+..+..+.+.
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv-~d~~~v~~~~~  121 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGA-NIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDV-RDEQQISAAVE  121 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCT-TCHHHHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCC-EEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccC-CCHHHHHHHHH
Confidence            578999998 59999999998888999 57777776542           233344453321 1  22 23334444454


Q ss_pred             HHHhhcCCCccEEEEccCC
Q 018075          243 KIQNAMGSGIDVSFDCVGF  261 (361)
Q Consensus       243 ~~~~~~~~~~d~vld~~g~  261 (361)
                      ++.+.. +++|+++++.|.
T Consensus       122 ~~~~~~-g~iDilVnnAG~  139 (346)
T 3kvo_A          122 KAIKKF-GGIDILVNNASA  139 (346)
T ss_dssp             HHHHHH-SCCCEEEECCCC
T ss_pred             HHHHHc-CCCCEEEECCCC
Confidence            444322 479999999884

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=96.49  E-value=0.022  Score=49.05  Aligned_cols=82  Identities=26%  Similarity=0.331  Sum_probs=52.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcCCC-EEeecC-CCccchhHHHHHHHhhcCCCcc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGAD-ETAKVS-TDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      .+.++||.| +|++|.+.+..+...|+ .|+.+++++++.+.+ +++... ..+..+ .+..+..+.+.++.+.. +++|
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~-g~iD   88 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGA-TVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDAL-GGFD   88 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHH-TCCC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHc-CCCC
Confidence            478999998 59999999998888999 688888887766543 334321 111111 22233444444443322 3799


Q ss_pred             EEEEccCC
Q 018075          254 VSFDCVGF  261 (361)
Q Consensus       254 ~vld~~g~  261 (361)
                      +++++.|.
T Consensus        89 ~lv~~Ag~   96 (263)
T 3ak4_A           89 LLCANAGV   96 (263)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999873

>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*

Probab=96.49  E-value=0.005  Score=52.82  Aligned_cols=99  Identities=15%  Similarity=0.274  Sum_probs=69.0

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCE-EeecCCCccchhHHHHHHHhhc
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADE-TAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~-~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      ..++++.+||-+|||. |..+..+++..+. .+++++.+++..+.+++    .|... +.....+..++.        ..
T Consensus        42 ~~~~~~~~vLDiG~G~-G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--------~~  111 (257)
T 3f4k_A           42 NELTDDAKIADIGCGT-GGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLP--------FQ  111 (257)
T ss_dssp             CCCCTTCEEEEETCTT-SHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCS--------SC
T ss_pred             hcCCCCCeEEEeCCCC-CHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCC--------CC
Confidence            4678999999999986 8899999998877 89999999987776655    34321 111111111110        11


Q ss_pred             CCCccEEEEc-----cCChHHHHHHHHhhcCCCEEEEEc
Q 018075          249 GSGIDVSFDC-----VGFDKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       249 ~~~~d~vld~-----~g~~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ...||+|+..     .+....++.+.+.|+|||+++...
T Consensus       112 ~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~  150 (257)
T 3f4k_A          112 NEELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSE  150 (257)
T ss_dssp             TTCEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             CCCEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEE
Confidence            3679999753     333457888999999999999875

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=96.49  E-value=0.023  Score=48.16  Aligned_cols=78  Identities=24%  Similarity=0.299  Sum_probs=51.9

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          179 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       179 g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      +.++||.| +|++|.+.++.+...|+ .|+.+++++++  ..++++... +..+-.+.+..+.+.++.+.. +++|++++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~-~V~~~~r~~~~--~~~~~~~~~-~~~D~~~~~~~~~~~~~~~~~-g~id~lv~   76 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGY-RVAIASRNPEE--AAQSLGAVP-LPTDLEKDDPKGLVKRALEAL-GGLHVLVH   76 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHH--HHHHHTCEE-EECCTTTSCHHHHHHHHHHHH-TSCCEEEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHH--HHHhhCcEE-EecCCchHHHHHHHHHHHHHc-CCCCEEEE
Confidence            56899998 59999999998888999 67788787765  344556322 222211145555555443322 47999999


Q ss_pred             ccCC
Q 018075          258 CVGF  261 (361)
Q Consensus       258 ~~g~  261 (361)
                      +.|.
T Consensus        77 ~Ag~   80 (239)
T 2ekp_A           77 AAAV   80 (239)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            8873

>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4

Probab=96.49  E-value=0.017  Score=46.71  Aligned_cols=104  Identities=12%  Similarity=0.237  Sum_probs=69.0

Q ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc----CCCE--EeecCCCccchhHHHHH
Q 018075          170 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADE--TAKVSTDIEDVDTDVGK  243 (361)
Q Consensus       170 ~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~--~~~~~~~~~~~~~~~~~  243 (361)
                      .++....+++++||-+|||. |..+..+++. +. .+++++.+++..+.+++.    +...  +.....   +..+.   
T Consensus        44 l~~~~~~~~~~~vLdiG~G~-G~~~~~~~~~-~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~---d~~~~---  114 (194)
T 1dus_A           44 LVENVVVDKDDDILDLGCGY-GVIGIALADE-VK-STTMADINRRAIKLAKENIKLNNLDNYDIRVVHS---DLYEN---  114 (194)
T ss_dssp             HHHHCCCCTTCEEEEETCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEEC---STTTT---
T ss_pred             HHHHcccCCCCeEEEeCCCC-CHHHHHHHHc-CC-eEEEEECCHHHHHHHHHHHHHcCCCccceEEEEC---chhcc---
Confidence            34556678999999999875 7777788877 66 799999999887776653    4321  211111   11111   


Q ss_pred             HHhhcCCCccEEEEccCC-------hHHHHHHHHhhcCCCEEEEEccCC
Q 018075          244 IQNAMGSGIDVSFDCVGF-------DKTMSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       244 ~~~~~~~~~d~vld~~g~-------~~~~~~~~~~l~~~G~~v~~g~~~  285 (361)
                      .   ....+|+|+....-       ...++.+.+.|+++|+++......
T Consensus       115 ~---~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~  160 (194)
T 1dus_A          115 V---KDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTK  160 (194)
T ss_dssp             C---TTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred             c---ccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence            1   13579999975431       136777888999999998875443

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=96.49  E-value=0.035  Score=48.31  Aligned_cols=82  Identities=21%  Similarity=0.197  Sum_probs=51.5

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeC-------------ChhHHHHH----HHcCCCEE---eecCCCcc
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDV-------------DVQRLSIA----RNLGADET---AKVSTDIE  235 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~-------------~~~~~~~~----~~lg~~~~---~~~~~~~~  235 (361)
                      -.|.++||.| +|++|.+.++.+...|+ .|+.+++             ++++.+.+    ++.+....   .++ .+..
T Consensus        13 l~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-~~~~   90 (280)
T 3pgx_A           13 LQGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDV-RDDA   90 (280)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCT-TCHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCC-CCHH
Confidence            4678999998 59999999998888999 6777765             44444322    23343221   122 2233


Q ss_pred             chhHHHHHHHhhcCCCccEEEEccCC
Q 018075          236 DVDTDVGKIQNAMGSGIDVSFDCVGF  261 (361)
Q Consensus       236 ~~~~~~~~~~~~~~~~~d~vld~~g~  261 (361)
                      +..+.+.++.+.. +++|+++++.|.
T Consensus        91 ~v~~~~~~~~~~~-g~id~lvnnAg~  115 (280)
T 3pgx_A           91 ALRELVADGMEQF-GRLDVVVANAGV  115 (280)
T ss_dssp             HHHHHHHHHHHHH-CCCCEEEECCCC
T ss_pred             HHHHHHHHHHHHc-CCCCEEEECCCC
Confidence            4444444443322 479999999874

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=96.48  E-value=0.031  Score=47.58  Aligned_cols=82  Identities=17%  Similarity=0.180  Sum_probs=51.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HHHcCC---CEEeecC-CCccchhHHHHHHHhhcCCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLGA---DETAKVS-TDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~  251 (361)
                      ++.++||.| +|++|.+.++.+...|+ .|+.++++.++.+. .+++..   ...+..+ .+..++.+.+.++.+.. .+
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~   82 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAF-GP   82 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH-SS
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHh-CC
Confidence            467899998 59999999998888999 68888888766543 333331   1122211 22233334444333222 47


Q ss_pred             ccEEEEccCC
Q 018075          252 IDVSFDCVGF  261 (361)
Q Consensus       252 ~d~vld~~g~  261 (361)
                      +|+++++.|.
T Consensus        83 id~li~~Ag~   92 (251)
T 1zk4_A           83 VSTLVNNAGI   92 (251)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999998873

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=96.48  E-value=0.011  Score=50.75  Aligned_cols=81  Identities=15%  Similarity=0.182  Sum_probs=53.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HH---cCCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN---LGADE-TAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      ++.++||.| +|++|.+.++.+...|+ .|+.++++.++.+.+ ++   .+... .+..+ .+..+..+.+.++.+.  +
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~--g   82 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH--A   82 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH--S
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh--C
Confidence            578899998 58999999998888999 688888887664432 22   24321 11111 2333444455555443  5


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|+++++.|.
T Consensus        83 ~id~lv~nAg~   93 (252)
T 3h7a_A           83 PLEVTIFNVGA   93 (252)
T ss_dssp             CEEEEEECCCC
T ss_pred             CceEEEECCCc
Confidence            79999999884

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=96.48  E-value=0.017  Score=50.30  Aligned_cols=82  Identities=21%  Similarity=0.347  Sum_probs=52.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-H---HcCCC-EEeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-R---NLGAD-ETAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~---~lg~~-~~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      .|.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ +   +.+.. ..+..+ .+..+..+.+.++.+.. +
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~-g  108 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGA-QVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGEL-G  108 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence            578999998 59999999998888999 677887877654332 2   23322 122211 22334444444444322 3


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|+++++.|.
T Consensus       109 ~iD~lvnnAg~  119 (276)
T 3r1i_A          109 GIDIAVCNAGI  119 (276)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999998874

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=96.47  E-value=0.01  Score=50.16  Aligned_cols=103  Identities=19%  Similarity=0.211  Sum_probs=68.5

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHHHc----CCCEEeecCCCccchhHHHHHHHhhcC-
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNAMG-  249 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~-  249 (361)
                      ..++++||-+|+| .|..++.+++..+ ...+++++.+++..+.+++.    |...-+.+..  .+..+.+.++.. .+ 
T Consensus        70 ~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~--~d~~~~l~~l~~-~~~  145 (232)
T 3cbg_A           70 LTGAKQVLEIGVF-RGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRL--GPALATLEQLTQ-GKP  145 (232)
T ss_dssp             HHTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEE--SCHHHHHHHHHT-SSS
T ss_pred             hcCCCEEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--cCHHHHHHHHHh-cCC
Confidence            4567899999988 5889999998874 23799999999887777653    4432111111  233333333321 11 


Q ss_pred             -CCccEEEEccCC---hHHHHHHHHhhcCCCEEEEEc
Q 018075          250 -SGIDVSFDCVGF---DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       250 -~~~d~vld~~g~---~~~~~~~~~~l~~~G~~v~~g  282 (361)
                       ..||+||-....   ...++.+.+.|+|||.++.-.
T Consensus       146 ~~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~  182 (232)
T 3cbg_A          146 LPEFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVIDN  182 (232)
T ss_dssp             CCCEEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEEC
T ss_pred             CCCcCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEeC
Confidence             579999854332   235788889999999998754

>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53

Probab=96.47  E-value=0.031  Score=46.53  Aligned_cols=98  Identities=12%  Similarity=0.073  Sum_probs=65.5

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhhcCCCc
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      .++.+||=+|||. |..++.+++......+++++.+++..+.+++    .+...+.....   +... +...  .....+
T Consensus        37 ~~~~~vLDiGcG~-G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~---d~~~-l~~~--~~~~~~  109 (213)
T 2fca_A           37 NDNPIHIEVGTGK-GQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNI---DADT-LTDV--FEPGEV  109 (213)
T ss_dssp             SCCCEEEEECCTT-SHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECC---CGGG-HHHH--CCTTSC
T ss_pred             CCCceEEEEecCC-CHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeC---CHHH-HHhh--cCcCCc
Confidence            3677888899886 8888899988744489999999987776654    35443322222   2222 1111  123568


Q ss_pred             cEEEEccCC--------------hHHHHHHHHhhcCCCEEEEE
Q 018075          253 DVSFDCVGF--------------DKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       253 d~vld~~g~--------------~~~~~~~~~~l~~~G~~v~~  281 (361)
                      |.|+-....              ...++.+.+.|+|||+++..
T Consensus       110 d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~  152 (213)
T 2fca_A          110 KRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFK  152 (213)
T ss_dssp             CEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEE
T ss_pred             CEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEE
Confidence            988754332              34688899999999999875

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.47  E-value=0.02  Score=49.11  Aligned_cols=81  Identities=20%  Similarity=0.238  Sum_probs=53.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecC-CCccchhHHHHHHHhhcCCCccEE
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS-TDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+..++++. ..+..+ .+..+..+.+.++.+.. +++|++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~-g~iD~l   81 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGG-AFFQVDLEDERERVRFVEEAAYAL-GRVDVL   81 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHH-SCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHc-CCCCEE
Confidence            467899998 59999999998888999 67778777766555555542 333222 22233444444433222 479999


Q ss_pred             EEccCC
Q 018075          256 FDCVGF  261 (361)
Q Consensus       256 ld~~g~  261 (361)
                      +++.|.
T Consensus        82 v~~Ag~   87 (256)
T 2d1y_A           82 VNNAAI   87 (256)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            998873

>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}

Probab=96.46  E-value=0.02  Score=48.47  Aligned_cols=96  Identities=13%  Similarity=0.062  Sum_probs=66.1

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccE
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV  254 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  254 (361)
                      .++++.+||-+|||. |..+..+++. |. .+++++.+++..+.+++. . ..+.     .+..+....   .....||+
T Consensus        38 ~~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~gvD~s~~~~~~a~~~-~-~~~~-----~d~~~~~~~---~~~~~fD~  104 (240)
T 3dli_A           38 YFKGCRRVLDIGCGR-GEFLELCKEE-GI-ESIGVDINEDMIKFCEGK-F-NVVK-----SDAIEYLKS---LPDKYLDG  104 (240)
T ss_dssp             GTTTCSCEEEETCTT-THHHHHHHHH-TC-CEEEECSCHHHHHHHHTT-S-EEEC-----SCHHHHHHT---SCTTCBSE
T ss_pred             hhcCCCeEEEEeCCC-CHHHHHHHhC-CC-cEEEEECCHHHHHHHHhh-c-ceee-----ccHHHHhhh---cCCCCeeE
Confidence            467889999999875 6666677765 77 589999999998888876 2 2221     222222111   12467999


Q ss_pred             EEEcc-----CC---hHHHHHHHHhhcCCCEEEEEcc
Q 018075          255 SFDCV-----GF---DKTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       255 vld~~-----g~---~~~~~~~~~~l~~~G~~v~~g~  283 (361)
                      |+...     ..   ...++.+.+.|+|||+++....
T Consensus       105 i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  141 (240)
T 3dli_A          105 VMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESP  141 (240)
T ss_dssp             EEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEE
T ss_pred             EEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence            98732     21   2478889999999999987643

>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A

Probab=96.46  E-value=0.013  Score=49.21  Aligned_cols=102  Identities=15%  Similarity=0.170  Sum_probs=65.4

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEeCChhHHHHHHHcC--CCEEeecCCCccchhHHHHHHHhhcCC
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARNLG--ADETAKVSTDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~lg--~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (361)
                      ..++++++||-+|||. |..+..+++..|. ..|++++.+++..+.+++.-  ...+.....+..+.. .   ... ...
T Consensus        69 ~~~~~~~~vLDlG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~---~~~-~~~  142 (227)
T 1g8a_A           69 FPIKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPE-E---YRA-LVP  142 (227)
T ss_dssp             CCCCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGG-G---GTT-TCC
T ss_pred             cCCCCCCEEEEEeccC-CHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcc-h---hhc-ccC
Confidence            4578999999999887 8888899988752 37999999997655443321  111111111111110 0   000 134


Q ss_pred             CccEEEEccCCh----HHHHHHHHhhcCCCEEEEE
Q 018075          251 GIDVSFDCVGFD----KTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       251 ~~d~vld~~g~~----~~~~~~~~~l~~~G~~v~~  281 (361)
                      .+|+|+.....+    ..+..+.+.|+|||+++..
T Consensus       143 ~~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~  177 (227)
T 1g8a_A          143 KVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA  177 (227)
T ss_dssp             CEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CceEEEECCCCHhHHHHHHHHHHHhcCCCCEEEEE
Confidence            799999766544    2378888999999999886

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=96.45  E-value=0.039  Score=48.45  Aligned_cols=105  Identities=16%  Similarity=0.208  Sum_probs=63.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCh--hHHH----HHHHcCCCEEe-ecC-CCccchhHHHHHHHhhc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDV--QRLS----IARNLGADETA-KVS-TDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~--~~~~----~~~~lg~~~~~-~~~-~~~~~~~~~~~~~~~~~  248 (361)
                      .|.++||.| +|++|.+.+..+...|+ .|+.++++.  ++.+    .+++.+..... ..+ .+..+..+.+.++.+..
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  126 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREAL  126 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            578999998 59999999998888999 567666542  2222    23334533221 111 12233333444443322


Q ss_pred             CCCccEEEEccCCh-----------H---------------HHHHHHHhhcCCCEEEEEccC
Q 018075          249 GSGIDVSFDCVGFD-----------K---------------TMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       249 ~~~~d~vld~~g~~-----------~---------------~~~~~~~~l~~~G~~v~~g~~  284 (361)
                       +++|+++++.|..           +               ..+.+++.+..+|+++.++..
T Consensus       127 -g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~  187 (294)
T 3r3s_A          127 -GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSI  187 (294)
T ss_dssp             -TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCG
T ss_pred             -CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCh
Confidence             4799999988742           1               233444567778999998754

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=96.45  E-value=0.031  Score=48.10  Aligned_cols=82  Identities=26%  Similarity=0.337  Sum_probs=52.3

Q ss_pred             CCCEEEEECC-C-HHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HHHc---CCCE--EeecC-CCccchhHHHHHHHhhc
Q 018075          178 PETNVMIMGS-G-PIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNL---GADE--TAKVS-TDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       178 ~g~~vlI~G~-g-~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~l---g~~~--~~~~~-~~~~~~~~~~~~~~~~~  248 (361)
                      .+.++||.|+ | ++|.+.+..+...|+ .|+.++++.++.+. .+++   +...  .+..+ .+..+..+.+.++.+..
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   99 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKA   99 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence            5789999985 6 799999998888999 68888888776543 2333   2111  12111 22334444444444322


Q ss_pred             CCCccEEEEccCC
Q 018075          249 GSGIDVSFDCVGF  261 (361)
Q Consensus       249 ~~~~d~vld~~g~  261 (361)
                       .++|+++++.|.
T Consensus       100 -g~id~li~~Ag~  111 (266)
T 3o38_A          100 -GRLDVLVNNAGL  111 (266)
T ss_dssp             -SCCCEEEECCCC
T ss_pred             -CCCcEEEECCCc
Confidence             479999999884

>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}

Probab=96.44  E-value=0.018  Score=48.32  Aligned_cols=98  Identities=13%  Similarity=0.261  Sum_probs=66.4

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCE---------EeecCCCccchhHHHHHHHh
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE---------TAKVSTDIEDVDTDVGKIQN  246 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~---------~~~~~~~~~~~~~~~~~~~~  246 (361)
                      ++++.+||-+|||. |..+..+++. |. .+++++.+++..+.+++.....         +.....+..+..        
T Consensus        28 ~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~--------   96 (235)
T 3sm3_A           28 LQEDDEILDIGCGS-GKISLELASK-GY-SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLS--------   96 (235)
T ss_dssp             CCTTCEEEEETCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCC--------
T ss_pred             CCCCCeEEEECCCC-CHHHHHHHhC-CC-eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccC--------
Confidence            56899999999876 7788888876 77 7999999999888887743211         111111111110        


Q ss_pred             hcCCCccEEEEcc-----CCh----HHHHHHHHhhcCCCEEEEEccC
Q 018075          247 AMGSGIDVSFDCV-----GFD----KTMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       247 ~~~~~~d~vld~~-----g~~----~~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      .....+|+|+...     ..+    ..++.+.+.|+|||+++.....
T Consensus        97 ~~~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~  143 (235)
T 3sm3_A           97 FHDSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFG  143 (235)
T ss_dssp             SCTTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred             CCCCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECC
Confidence            1245799998642     122    4788889999999999987543

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=96.44  E-value=0.02  Score=48.95  Aligned_cols=82  Identities=20%  Similarity=0.293  Sum_probs=52.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHH-Hc-----C-C-CEEeecC-CCccchhHHHHHHHhh
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NL-----G-A-DETAKVS-TDIEDVDTDVGKIQNA  247 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~l-----g-~-~~~~~~~-~~~~~~~~~~~~~~~~  247 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.++++.++.+.+. ++     + . ...+..+ .+..+..+.+.++.+.
T Consensus         6 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (250)
T 3nyw_A            6 QKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK   84 (250)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence            567899998 59999999998888899 6888888887654432 22     2 1 1122111 2223444444444332


Q ss_pred             cCCCccEEEEccCC
Q 018075          248 MGSGIDVSFDCVGF  261 (361)
Q Consensus       248 ~~~~~d~vld~~g~  261 (361)
                      . +++|+++++.|.
T Consensus        85 ~-g~iD~lvnnAg~   97 (250)
T 3nyw_A           85 Y-GAVDILVNAAAM   97 (250)
T ss_dssp             H-CCEEEEEECCCC
T ss_pred             c-CCCCEEEECCCc
Confidence            2 479999999885

>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}

Probab=96.43  E-value=0.01  Score=49.05  Aligned_cols=98  Identities=18%  Similarity=0.286  Sum_probs=66.6

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCC----EEeecCCCccchhHHHHHHHhhcCCC
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD----ETAKVSTDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~----~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (361)
                      ++++++||.+|||. |..+..+++. |...+++++.++...+.+++....    ..+.  .   +..+    + ......
T Consensus        40 ~~~~~~vLdiGcG~-G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~i~~~~--~---d~~~----~-~~~~~~  107 (215)
T 2pxx_A           40 LRPEDRILVLGCGN-SALSYELFLG-GFPNVTSVDYSSVVVAAMQACYAHVPQLRWET--M---DVRK----L-DFPSAS  107 (215)
T ss_dssp             CCTTCCEEEETCTT-CSHHHHHHHT-TCCCEEEEESCHHHHHHHHHHTTTCTTCEEEE--C---CTTS----C-CSCSSC
T ss_pred             cCCCCeEEEECCCC-cHHHHHHHHc-CCCcEEEEeCCHHHHHHHHHhcccCCCcEEEE--c---chhc----C-CCCCCc
Confidence            58899999999876 7788888876 544799999999998888775321    1111  1   1111    0 011357


Q ss_pred             ccEEEEccC---------------------ChHHHHHHHHhhcCCCEEEEEccCC
Q 018075          252 IDVSFDCVG---------------------FDKTMSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       252 ~d~vld~~g---------------------~~~~~~~~~~~l~~~G~~v~~g~~~  285 (361)
                      +|+|+....                     ....++.+.+.|+|+|+++......
T Consensus       108 fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~  162 (215)
T 2pxx_A          108 FDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA  162 (215)
T ss_dssp             EEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred             ccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence            999997321                     1246778889999999999876543

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=96.43  E-value=0.018  Score=49.57  Aligned_cols=82  Identities=12%  Similarity=0.204  Sum_probs=52.1

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HHHc---CCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNL---GADE-TAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~l---g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+. ++++   +... .+..+ .+..+..+.+.++.+..++
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   86 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG   86 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            578899998 59999999998888999 68888888766543 2222   3221 11111 2223344444444332225


Q ss_pred             CccEEEEccC
Q 018075          251 GIDVSFDCVG  260 (361)
Q Consensus       251 ~~d~vld~~g  260 (361)
                      ++|+++++.|
T Consensus        87 ~id~lv~~Ag   96 (260)
T 2ae2_A           87 KLNILVNNAG   96 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=96.43  E-value=0.022  Score=49.07  Aligned_cols=82  Identities=20%  Similarity=0.341  Sum_probs=50.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHH-cCCCEEEEEeCChhHHHH-HHHc---CCC-EEeecC-CCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARA-FGAPRIIITDVDVQRLSI-ARNL---GAD-ETAKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~-~g~~~vv~v~~~~~~~~~-~~~l---g~~-~~~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      ++.++||.| +|.+|.+.+..+.. .|+ .|+.++++.++.+. ++++   +.. ..+..+ .+..+....+.++.... 
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-   80 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY-   80 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhc-
Confidence            567899998 59999999987777 899 67888787665432 2222   322 222211 22233444444443322 


Q ss_pred             CCccEEEEccCC
Q 018075          250 SGIDVSFDCVGF  261 (361)
Q Consensus       250 ~~~d~vld~~g~  261 (361)
                      +++|++|++.|.
T Consensus        81 g~id~li~~Ag~   92 (276)
T 1wma_A           81 GGLDVLVNNAGI   92 (276)
T ss_dssp             SSEEEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            479999998873

>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A

Probab=96.43  E-value=0.018  Score=51.58  Aligned_cols=100  Identities=19%  Similarity=0.222  Sum_probs=67.2

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcC------C--CEEeecCCCccchhHHHHHHHh
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG------A--DETAKVSTDIEDVDTDVGKIQN  246 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg------~--~~~~~~~~~~~~~~~~~~~~~~  246 (361)
                      ...++.+||++|+|. |..+..+++..+...|++++.+++..+.+++.-      .  ..+....   .+..+.+...  
T Consensus       117 ~~~~~~~VLdIG~G~-G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~---~D~~~~l~~~--  190 (334)
T 1xj5_A          117 SIPNPKKVLVIGGGD-GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVI---GDGVAFLKNA--  190 (334)
T ss_dssp             TSSCCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEE---SCHHHHHHTS--
T ss_pred             hCCCCCEEEEECCCc-cHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEE---CCHHHHHHhc--
Confidence            345678999999875 777888888765558999999999888877631      1  1111111   2333332211  


Q ss_pred             hcCCCccEEEEccC----------ChHHHHHHHHhhcCCCEEEEE
Q 018075          247 AMGSGIDVSFDCVG----------FDKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       247 ~~~~~~d~vld~~g----------~~~~~~~~~~~l~~~G~~v~~  281 (361)
                       ....||+|+....          ....++.+.+.|+|||.++.-
T Consensus       191 -~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~  234 (334)
T 1xj5_A          191 -AEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ  234 (334)
T ss_dssp             -CTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred             -cCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence             2357999986432          235788899999999999885

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=96.43  E-value=0.016  Score=50.21  Aligned_cols=81  Identities=22%  Similarity=0.377  Sum_probs=51.3

Q ss_pred             CCCEEEEEC---CCHHHHHHHHHHHHcCCCEEEEEeCChhH--HHHHHHcCCC--EE-eecCCCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMG---SGPIGLVTLLAARAFGAPRIIITDVDVQR--LSIARNLGAD--ET-AKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G---~g~~G~~ai~la~~~g~~~vv~v~~~~~~--~~~~~~lg~~--~~-~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      ++.++||.|   +|++|.+.++.+...|+ .|+.++++.++  .+..++++..  .+ .++ .+..+..+.+.++.+..+
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~~g   83 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDV-QNEEHLASLAGRVTEAIG   83 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCT-TCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHhcCCCceEEEccC-CCHHHHHHHHHHHHHHhC
Confidence            468899998   48999999998888999 57777777654  3344445422  11 222 222334444444433222


Q ss_pred             --CCccEEEEccC
Q 018075          250 --SGIDVSFDCVG  260 (361)
Q Consensus       250 --~~~d~vld~~g  260 (361)
                        .++|+++++.|
T Consensus        84 ~~~~iD~lv~nAg   96 (269)
T 2h7i_A           84 AGNKLDGVVHSIG   96 (269)
T ss_dssp             TTCCEEEEEECCC
T ss_pred             CCCCceEEEECCc
Confidence              27999999887

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=96.43  E-value=0.025  Score=48.45  Aligned_cols=77  Identities=10%  Similarity=0.084  Sum_probs=51.0

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHH---HcCCCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          180 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR---NLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       180 ~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~---~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      .++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+.   +.+.+... +  +..+..+.+.++.+.. +++|++
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~-~--d~~~v~~~~~~~~~~~-g~iD~l   76 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKP-M--SEQEPAELIEAVTSAY-GQVDVL   76 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEE-C--CCCSHHHHHHHHHHHH-SCCCEE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCcEEE-E--CHHHHHHHHHHHHHHh-CCCCEE
Confidence            3688888 59999999998888999 6888888776554433   23433221 1  3345555555544322 479999


Q ss_pred             EEccCC
Q 018075          256 FDCVGF  261 (361)
Q Consensus       256 ld~~g~  261 (361)
                      +++.|.
T Consensus        77 v~nAg~   82 (254)
T 1zmt_A           77 VSNDIF   82 (254)
T ss_dssp             EEECCC
T ss_pred             EECCCc
Confidence            998874

>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0

Probab=96.42  E-value=0.01  Score=49.75  Aligned_cols=104  Identities=16%  Similarity=0.201  Sum_probs=68.4

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHHH----cCCCE-EeecCCCccchhHHHHHHHhhc
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADE-TAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~-~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      ...++.+||-+|+|. |..++.+++..+ ...|++++.+++..+.+++    .|... +....   .+..+.+..+....
T Consensus        61 ~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~~~~~~~~~~  136 (225)
T 3tr6_A           61 KLMQAKKVIDIGTFT-GYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRL---SPAKDTLAELIHAG  136 (225)
T ss_dssp             HHHTCSEEEEECCTT-SHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE---SCHHHHHHHHHTTT
T ss_pred             HhhCCCEEEEeCCcc-hHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe---CCHHHHHHHhhhcc
Confidence            345788999999876 888889998764 4489999999987776655    35432 21111   23333333332100


Q ss_pred             -CCCccEEEEccCC---hHHHHHHHHhhcCCCEEEEEc
Q 018075          249 -GSGIDVSFDCVGF---DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       249 -~~~~d~vld~~g~---~~~~~~~~~~l~~~G~~v~~g  282 (361)
                       ...||+|+-....   ...++.+.+.|+|||.++.-.
T Consensus       137 ~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~  174 (225)
T 3tr6_A          137 QAWQYDLIYIDADKANTDLYYEESLKLLREGGLIAVDN  174 (225)
T ss_dssp             CTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCCccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence             1679999964442   235788889999999998754

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=96.41  E-value=0.014  Score=54.86  Aligned_cols=93  Identities=19%  Similarity=0.220  Sum_probs=69.4

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      .-.|.+|.|+|.|.+|..+++.++.+|+ .|++.+.+..+...+...|...        .++    .++    -...|+|
T Consensus       274 ~L~GktVgIIG~G~IG~~vA~~l~~~G~-~V~v~d~~~~~~~~a~~~G~~~--------~~l----~el----l~~aDiV  336 (494)
T 3d64_A          274 MIAGKIAVVAGYGDVGKGCAQSLRGLGA-TVWVTEIDPICALQAAMEGYRV--------VTM----EYA----ADKADIF  336 (494)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSCHHHHHHHHTTTCEE--------CCH----HHH----TTTCSEE
T ss_pred             ccCCCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCChHhHHHHHHcCCEe--------CCH----HHH----HhcCCEE
Confidence            3578999999999999999999999999 7899998887653444456532        122    222    2469999


Q ss_pred             EEccCChHHH-HHHHHhhcCCCEEEEEccCC
Q 018075          256 FDCVGFDKTM-STALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       256 ld~~g~~~~~-~~~~~~l~~~G~~v~~g~~~  285 (361)
                      +.+++....+ ...+..|+++..++.++...
T Consensus       337 i~~~~t~~lI~~~~l~~MK~gAilINvgrg~  367 (494)
T 3d64_A          337 VTATGNYHVINHDHMKAMRHNAIVCNIGHFD  367 (494)
T ss_dssp             EECSSSSCSBCHHHHHHCCTTEEEEECSSSS
T ss_pred             EECCCcccccCHHHHhhCCCCcEEEEcCCCc
Confidence            9998655333 46788999999888887544

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=96.41  E-value=0.02  Score=49.28  Aligned_cols=81  Identities=20%  Similarity=0.310  Sum_probs=51.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHc-----CCC-EEeecC-CCccchhHHHHHHHhhc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL-----GAD-ETAKVS-TDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l-----g~~-~~~~~~-~~~~~~~~~~~~~~~~~  248 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ +++     +.. ..+..+ .+..+....+.++.+. 
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-   83 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGA-RLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDL-   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHT-
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHh-
Confidence            467899998 59999999998888999 688888887665432 322     211 122111 2223344444444332 


Q ss_pred             CCCccEEEEccCC
Q 018075          249 GSGIDVSFDCVGF  261 (361)
Q Consensus       249 ~~~~d~vld~~g~  261 (361)
                       .++|+++++.|.
T Consensus        84 -~gid~lv~~Ag~   95 (260)
T 2z1n_A           84 -GGADILVYSTGG   95 (260)
T ss_dssp             -TCCSEEEECCCC
T ss_pred             -cCCCEEEECCCC
Confidence             239999999873

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=96.39  E-value=0.023  Score=49.33  Aligned_cols=83  Identities=14%  Similarity=0.236  Sum_probs=53.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HH---cCCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN---LGADE-TAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ ++   .+... .+..+ .+..+..+.+.++.+..++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   98 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG   98 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            578899998 59999999998888999 688888887765432 22   24322 11111 2223344444444332225


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|+++++.|.
T Consensus        99 ~id~lv~nAg~  109 (273)
T 1ae1_A           99 KLNILVNNAGV  109 (273)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCcEEEECCCC
Confidence            79999999874

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=96.39  E-value=0.034  Score=48.11  Aligned_cols=82  Identities=17%  Similarity=0.265  Sum_probs=50.1

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeC-ChhHHHH----HHHcCCCE-EeecC-CCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDV-DVQRLSI----ARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~-~~~~~~~----~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++ +.++.+.    +++.+... .+..+ .+..+..+.+.++.+.. 
T Consensus        27 ~~k~vlVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~-  104 (269)
T 4dmm_A           27 TDRIALVTGASRGIGRAIALELAAAGA-KVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERW-  104 (269)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            578899998 59999999998888999 4655555 5544332    23334322 12111 22333444444443322 


Q ss_pred             CCccEEEEccCC
Q 018075          250 SGIDVSFDCVGF  261 (361)
Q Consensus       250 ~~~d~vld~~g~  261 (361)
                      +++|+++++.|.
T Consensus       105 g~id~lv~nAg~  116 (269)
T 4dmm_A          105 GRLDVLVNNAGI  116 (269)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999998874

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=96.39  E-value=0.024  Score=49.61  Aligned_cols=81  Identities=23%  Similarity=0.352  Sum_probs=52.2

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHH-HcCCCEEeecCCCccchhHHHHHHHhhcCCCccE
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV  254 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  254 (361)
                      -+|.++||.| +|++|.+.++.+...|+ .|+.++++.++.+.+. +++... ..+..+-.+.. .++++.+.. .++|+
T Consensus        14 l~gk~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~Dl~d~~-~v~~~~~~~-~~iD~   89 (291)
T 3rd5_A           14 FAQRTVVITGANSGLGAVTARELARRGA-TVIMAVRDTRKGEAAARTMAGQV-EVRELDLQDLS-SVRRFADGV-SGADV   89 (291)
T ss_dssp             CTTCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTSSSEE-EEEECCTTCHH-HHHHHHHTC-CCEEE
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCe-eEEEcCCCCHH-HHHHHHHhc-CCCCE
Confidence            3578999998 59999999998888999 6888888887765543 344321 11111212222 233332212 47999


Q ss_pred             EEEccCC
Q 018075          255 SFDCVGF  261 (361)
Q Consensus       255 vld~~g~  261 (361)
                      ++++.|.
T Consensus        90 lv~nAg~   96 (291)
T 3rd5_A           90 LINNAGI   96 (291)
T ss_dssp             EEECCCC
T ss_pred             EEECCcC
Confidence            9999874

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=96.37  E-value=0.047  Score=51.12  Aligned_cols=82  Identities=21%  Similarity=0.286  Sum_probs=54.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhH---HHHHHHcCCCEE-eecCCCccchhHHHHHHHhhcCCCc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQR---LSIARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~---~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      ++.++||.| +|++|.+.++.+...|+ +|+.+++++..   .+..++++...+ .++ ++..+....+.++.+..+..+
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga-~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dv-td~~~v~~~~~~~~~~~g~~i  289 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGA-TVVAIDVDGAAEDLKRVADKVGGTALTLDV-TADDAVDKITAHVTEHHGGKV  289 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECGGGHHHHHHHHHHHTCEEEECCT-TSTTHHHHHHHHHHHHSTTCC
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEec-CCHHHHHHHHHHHHHHcCCCc
Confidence            577899998 69999999998878899 67777765432   234455565432 222 334455555555544344459


Q ss_pred             cEEEEccCC
Q 018075          253 DVSFDCVGF  261 (361)
Q Consensus       253 d~vld~~g~  261 (361)
                      |+++++.|.
T Consensus       290 d~lV~nAGv  298 (454)
T 3u0b_A          290 DILVNNAGI  298 (454)
T ss_dssp             SEEEECCCC
T ss_pred             eEEEECCcc
Confidence            999999875

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=96.34  E-value=0.06  Score=46.69  Aligned_cols=82  Identities=20%  Similarity=0.316  Sum_probs=51.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH----HHcCC-CEE--eecC-CCccchhHHHHHHHhhc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGA-DET--AKVS-TDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~-~~~--~~~~-~~~~~~~~~~~~~~~~~  248 (361)
                      ++.++||.| +|++|.+.++.+...|+ .|+.++++.++.+.+    ++.+. ..+  +..+ .+..++.+.+.++... 
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-  108 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ-  108 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh-
Confidence            468899998 59999999998888999 688888887665433    22332 111  1111 2223333444433322 


Q ss_pred             CCCccEEEEccCC
Q 018075          249 GSGIDVSFDCVGF  261 (361)
Q Consensus       249 ~~~~d~vld~~g~  261 (361)
                      -.++|++|++.|.
T Consensus       109 ~g~iD~vi~~Ag~  121 (279)
T 1xg5_A          109 HSGVDICINNAGL  121 (279)
T ss_dssp             HCCCSEEEECCCC
T ss_pred             CCCCCEEEECCCC
Confidence            2479999999873

>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}

Probab=96.34  E-value=0.024  Score=53.50  Aligned_cols=97  Identities=20%  Similarity=0.298  Sum_probs=65.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhhcCCC
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (361)
                      ++|++||=+|||+ |..++++|+.++ ...|++++.++++.+.+++    +|...+.....+..++..   .    ....
T Consensus       116 ~~g~~VLDl~aGp-G~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~---~----~~~~  187 (479)
T 2frx_A          116 NAPQRVMDVAAAP-GSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGA---A----VPEM  187 (479)
T ss_dssp             CCCSEEEESSCTT-SHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHH---H----STTC
T ss_pred             CCCCEEEEeCCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhh---h----cccc
Confidence            3999999988776 667778888774 2379999999998876654    466443332222222211   0    1357


Q ss_pred             ccEEEE---ccCCh-------------------------HHHHHHHHhhcCCCEEEEE
Q 018075          252 IDVSFD---CVGFD-------------------------KTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       252 ~d~vld---~~g~~-------------------------~~~~~~~~~l~~~G~~v~~  281 (361)
                      ||.|+-   |+|..                         ..+..+++.|+|||+++..
T Consensus       188 fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~Lvys  245 (479)
T 2frx_A          188 FDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYS  245 (479)
T ss_dssp             EEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEe
Confidence            999986   54421                         2466788999999999864

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=96.33  E-value=0.024  Score=50.14  Aligned_cols=89  Identities=19%  Similarity=0.194  Sum_probs=66.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      .|.+|.|+|.|.+|...++.++.+|+ .|++.+++.++ +.+.++|+...        ++.+.+        ...|+|+.
T Consensus       141 ~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~~--------~l~ell--------~~aDvV~l  202 (307)
T 1wwk_A          141 EGKTIGIIGFGRIGYQVAKIANALGM-NILLYDPYPNE-ERAKEVNGKFV--------DLETLL--------KESDVVTI  202 (307)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHTTCEEC--------CHHHHH--------HHCSEEEE
T ss_pred             CCceEEEEccCHHHHHHHHHHHHCCC-EEEEECCCCCh-hhHhhcCcccc--------CHHHHH--------hhCCEEEE
Confidence            57899999999999999999999999 68888888776 55677776421        222222        25899999


Q ss_pred             ccCChH----HH-HHHHHhhcCCCEEEEEccC
Q 018075          258 CVGFDK----TM-STALNATRPGGKVCLIGLA  284 (361)
Q Consensus       258 ~~g~~~----~~-~~~~~~l~~~G~~v~~g~~  284 (361)
                      ++....    .+ ...+..|++++.++.++..
T Consensus       203 ~~p~~~~t~~li~~~~l~~mk~ga~lin~arg  234 (307)
T 1wwk_A          203 HVPLVESTYHLINEERLKLMKKTAILINTSRG  234 (307)
T ss_dssp             CCCCSTTTTTCBCHHHHHHSCTTCEEEECSCG
T ss_pred             ecCCChHHhhhcCHHHHhcCCCCeEEEECCCC
Confidence            877432    12 4577889999988887653

>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*

Probab=96.32  E-value=0.032  Score=48.78  Aligned_cols=99  Identities=17%  Similarity=0.190  Sum_probs=66.4

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc-CC-------CEEeecCCCccchhHHHHHHHhh
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL-GA-------DETAKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l-g~-------~~~~~~~~~~~~~~~~~~~~~~~  247 (361)
                      ..++.+||++|+|. |..+..+++..+...+++++.+++..+.+++. ..       ..+...   ..+..+.+..    
T Consensus        76 ~~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~---~~D~~~~l~~----  147 (283)
T 2i7c_A           76 SKEPKNVLVVGGGD-GGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVF---IEDASKFLEN----  147 (283)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEE---ESCHHHHHHH----
T ss_pred             CCCCCeEEEEeCCc-CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEE---ECChHHHHHh----
Confidence            45678999999765 66777777766555899999999988888773 21       111111   1233333322    


Q ss_pred             cCCCccEEEEccCC----------hHHHHHHHHhhcCCCEEEEEc
Q 018075          248 MGSGIDVSFDCVGF----------DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       248 ~~~~~d~vld~~g~----------~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ....+|+|+.....          ...++.+.+.|+|+|.++...
T Consensus       148 ~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~  192 (283)
T 2i7c_A          148 VTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC  192 (283)
T ss_dssp             CCSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence            24679999863211          357888999999999998764

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=96.32  E-value=0.016  Score=54.31  Aligned_cols=93  Identities=24%  Similarity=0.232  Sum_probs=69.7

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      --.|.+|+|+|.|.+|..+++.++.+|+ .|++.+.+..+...+...|+..        .++.    ++    -...|+|
T Consensus       254 ~l~GktVgIIG~G~IG~~vA~~l~~~G~-~Viv~d~~~~~~~~a~~~g~~~--------~~l~----el----l~~aDiV  316 (479)
T 1v8b_A          254 LISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGFNV--------VTLD----EI----VDKGDFF  316 (479)
T ss_dssp             CCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTCEE--------CCHH----HH----TTTCSEE
T ss_pred             ccCCCEEEEEeeCHHHHHHHHHHHhCcC-EEEEEeCChhhHHHHHHcCCEe--------cCHH----HH----HhcCCEE
Confidence            4578999999999999999999999999 7999999887754455556521        1222    22    2469999


Q ss_pred             EEccCChHHH-HHHHHhhcCCCEEEEEccCC
Q 018075          256 FDCVGFDKTM-STALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       256 ld~~g~~~~~-~~~~~~l~~~G~~v~~g~~~  285 (361)
                      +.+.+....+ ...+..|++++.++.++...
T Consensus       317 i~~~~t~~lI~~~~l~~MK~gailiNvgrg~  347 (479)
T 1v8b_A          317 ITCTGNVDVIKLEHLLKMKNNAVVGNIGHFD  347 (479)
T ss_dssp             EECCSSSSSBCHHHHTTCCTTCEEEECSSTT
T ss_pred             EECCChhhhcCHHHHhhcCCCcEEEEeCCCC
Confidence            9987655433 36778899999998887554

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=96.31  E-value=0.024  Score=48.57  Aligned_cols=82  Identities=26%  Similarity=0.309  Sum_probs=53.1

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HHHcCCCE-EeecC-CCccchhHHHHHHHhhcCCCcc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+. +++++... .+..+ .+..+..+.+.++.+.. +++|
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~iD   81 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEF-GSVD   81 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            468899998 59999999998888999 68888888776543 34454321 11111 22233444444443322 3799


Q ss_pred             EEEEccCC
Q 018075          254 VSFDCVGF  261 (361)
Q Consensus       254 ~vld~~g~  261 (361)
                      +++++.|.
T Consensus        82 ~lv~nAg~   89 (254)
T 1hdc_A           82 GLVNNAGI   89 (254)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99998874

>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17

Probab=96.31  E-value=0.0067  Score=53.97  Aligned_cols=98  Identities=13%  Similarity=0.132  Sum_probs=65.6

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCC--------CEEeecCCCccchhHHHHHHHhhc
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA--------DETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~--------~~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      .++.+||++|+|. |..+..+++..+...+++++.+++..+.+++.-.        ..+... .  .+..+.+..    .
T Consensus       107 ~~~~~VLdIG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~-~--~D~~~~l~~----~  178 (314)
T 2b2c_A          107 PDPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLF-C--GDGFEFLKN----H  178 (314)
T ss_dssp             SSCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEE-C--SCHHHHHHH----C
T ss_pred             CCCCEEEEEcCCc-CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEE-E--ChHHHHHHh----c
Confidence            4568999999876 7777788877655589999999998888877321        111111 1  233333322    2


Q ss_pred             CCCccEEEEccCC----------hHHHHHHHHhhcCCCEEEEEc
Q 018075          249 GSGIDVSFDCVGF----------DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       249 ~~~~d~vld~~g~----------~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ...||+|+.....          ...++.+.+.|+|+|.++.-.
T Consensus       179 ~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~  222 (314)
T 2b2c_A          179 KNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG  222 (314)
T ss_dssp             TTCEEEEEECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred             CCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence            4679999864421          346788899999999998754

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=96.30  E-value=0.03  Score=50.69  Aligned_cols=100  Identities=16%  Similarity=0.169  Sum_probs=68.3

Q ss_pred             HHHHhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC----hhH---------HHHHHHcCCCEEeecCCCc
Q 018075          169 HACRRAN-VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD----VQR---------LSIARNLGADETAKVSTDI  234 (361)
Q Consensus       169 ~~l~~~~-~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~----~~~---------~~~~~~lg~~~~~~~~~~~  234 (361)
                      .+++..+ --++.+|+|.|+|..|..+++++..+|++.|+.++++    .+|         .+++++.+..      ...
T Consensus       181 ~A~~i~g~~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~~~~~------~~~  254 (388)
T 1vl6_A          181 NALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPE------RLS  254 (388)
T ss_dssp             HHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHTSCTT------CCC
T ss_pred             HHHHHhCCCCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHhhhcc------Cch
Confidence            3444433 2367899999999999999999999999889999987    544         4555543321      112


Q ss_pred             cchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEc
Q 018075          235 EDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      .++.+.+        .++|++|.+++.....++.++.|+++-.++.+.
T Consensus       255 ~~L~eav--------~~ADVlIG~Sap~l~t~emVk~Ma~~pIIfalS  294 (388)
T 1vl6_A          255 GDLETAL--------EGADFFIGVSRGNILKPEWIKKMSRKPVIFALA  294 (388)
T ss_dssp             SCHHHHH--------TTCSEEEECSCSSCSCHHHHTTSCSSCEEEECC
T ss_pred             hhHHHHH--------ccCCEEEEeCCCCccCHHHHHhcCCCCEEEEcC
Confidence            3444433        358999998885445677888898877444443

>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*

Probab=96.29  E-value=0.0072  Score=53.32  Aligned_cols=98  Identities=16%  Similarity=0.120  Sum_probs=64.3

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcC--------CCEEeecCCCccchhHHHHHHHhhc
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG--------ADETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg--------~~~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      .++.+||++|+|. |..+..+++..+...+++++.+++..+.+++.-        ...+....   .+..+.+.    ..
T Consensus        89 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~---~D~~~~l~----~~  160 (296)
T 1inl_A           89 PNPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVI---ANGAEYVR----KF  160 (296)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE---SCHHHHGG----GC
T ss_pred             CCCCEEEEEcCCc-CHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEE---CcHHHHHh----hC
Confidence            3568999999776 667778888766668999999999888877631        11111111   23222221    12


Q ss_pred             CCCccEEEEccCC-----------hHHHHHHHHhhcCCCEEEEEc
Q 018075          249 GSGIDVSFDCVGF-----------DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       249 ~~~~d~vld~~g~-----------~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ...||+|+-....           ...++.+.+.|+|+|.++...
T Consensus       161 ~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  205 (296)
T 1inl_A          161 KNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET  205 (296)
T ss_dssp             SSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence            4579999853211           346788899999999998863

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=96.29  E-value=0.026  Score=47.92  Aligned_cols=83  Identities=12%  Similarity=0.188  Sum_probs=52.8

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH----HHcCC--CEEeecC---CCccchhHHHHHHHh
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGA--DETAKVS---TDIEDVDTDVGKIQN  246 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~--~~~~~~~---~~~~~~~~~~~~~~~  246 (361)
                      -+|.++||.| +|++|.+.+..+...|+ .|+.+++++++.+.+    ++.+.  ...+..+   .+..+..+...++.+
T Consensus        12 l~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~   90 (247)
T 3i1j_A           12 LKGRVILVTGAARGIGAAAARAYAAHGA-SVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEH   90 (247)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHH
Confidence            3578999998 59999999998888999 688888888765433    22331  1222222   122233334444433


Q ss_pred             hcCCCccEEEEccCC
Q 018075          247 AMGSGIDVSFDCVGF  261 (361)
Q Consensus       247 ~~~~~~d~vld~~g~  261 (361)
                      .. +++|+++++.|.
T Consensus        91 ~~-g~id~lv~nAg~  104 (247)
T 3i1j_A           91 EF-GRLDGLLHNASI  104 (247)
T ss_dssp             HH-SCCSEEEECCCC
T ss_pred             hC-CCCCEEEECCcc
Confidence            22 479999998874

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=96.28  E-value=0.065  Score=40.78  Aligned_cols=93  Identities=16%  Similarity=0.158  Sum_probs=58.6

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH-cCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          179 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       179 g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      +.+++|+|+|.+|...++.+...|. .|+.++.++++.+.+.+ ++...+. .+.  .+. +.+.   ...-.++|+|+.
T Consensus         4 ~m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~~~~~-~d~--~~~-~~l~---~~~~~~~d~vi~   75 (140)
T 1lss_A            4 GMYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDALVIN-GDC--TKI-KTLE---DAGIEDADMYIA   75 (140)
T ss_dssp             -CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSEEEE-SCT--TSH-HHHH---HTTTTTCSEEEE
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHhcCcEEEE-cCC--CCH-HHHH---HcCcccCCEEEE
Confidence            3589999999999999998888898 68888898887776653 4653321 111  111 1121   112357999999


Q ss_pred             ccCChHH---HHHHHHhhcCCCEEEE
Q 018075          258 CVGFDKT---MSTALNATRPGGKVCL  280 (361)
Q Consensus       258 ~~g~~~~---~~~~~~~l~~~G~~v~  280 (361)
                      +++....   +....+.+.+. +++.
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~-~ii~  100 (140)
T 1lss_A           76 VTGKEEVNLMSSLLAKSYGIN-KTIA  100 (140)
T ss_dssp             CCSCHHHHHHHHHHHHHTTCC-CEEE
T ss_pred             eeCCchHHHHHHHHHHHcCCC-EEEE
Confidence            9987632   22334445553 5544

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=96.28  E-value=0.041  Score=46.88  Aligned_cols=78  Identities=15%  Similarity=0.256  Sum_probs=51.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCh--hHHHHHHHcCCCEE-eecC-CCccchhHHHHHHHhhcCCCc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDV--QRLSIARNLGADET-AKVS-TDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~--~~~~~~~~lg~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      +|+++||.| ++++|.+.++.+...|+ .|+.++++.  +..+.+++.|.... +..+ .+..+...    ..  ...++
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~----~~--~~g~i   80 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGA-EVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKD----SF--TDAGF   80 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTT----SS--TTTCC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCC-EEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHH----HH--HhCCC
Confidence            688999998 68999999999999999 577777653  45566677775432 2111 11112211    11  13579


Q ss_pred             cEEEEccCCh
Q 018075          253 DVSFDCVGFD  262 (361)
Q Consensus       253 d~vld~~g~~  262 (361)
                      |+++++.|..
T Consensus        81 DiLVNNAGi~   90 (247)
T 4hp8_A           81 DILVNNAGII   90 (247)
T ss_dssp             CEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            9999998754

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=96.28  E-value=0.026  Score=48.26  Aligned_cols=99  Identities=19%  Similarity=0.212  Sum_probs=63.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  256 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  256 (361)
                      -+.++||.| +|++|.+.++.+...|+ .|+.++++.++.+.     ....++ ..+..+....+.++.+ ...++|+++
T Consensus        21 m~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~-----~~~~~d-~~d~~~v~~~~~~~~~-~~g~iD~li   92 (251)
T 3orf_A           21 MSKNILVLGGSGALGAEVVKFFKSKSW-NTISIDFRENPNAD-----HSFTIK-DSGEEEIKSVIEKINS-KSIKVDTFV   92 (251)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCTTSS-----EEEECS-CSSHHHHHHHHHHHHT-TTCCEEEEE
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCcccccc-----cceEEE-eCCHHHHHHHHHHHHH-HcCCCCEEE
Confidence            367899998 59999999998888999 58888777654321     111122 2333444445544443 234799999


Q ss_pred             EccCCh-----------H---------------HHHHHHHhhcCCCEEEEEccC
Q 018075          257 DCVGFD-----------K---------------TMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       257 d~~g~~-----------~---------------~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      ++.|..           +               ..+.+.+.+..+|+++.++..
T Consensus        93 ~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~  146 (251)
T 3orf_A           93 CAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGAS  146 (251)
T ss_dssp             ECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred             ECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEech
Confidence            998831           1               233445566678999998754

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=96.26  E-value=0.033  Score=49.39  Aligned_cols=85  Identities=14%  Similarity=0.136  Sum_probs=53.7

Q ss_pred             HHHHHhcCC-CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC---hhHHH-HHHHcC----CC-EEeecCCCccch
Q 018075          168 VHACRRANV-GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD---VQRLS-IARNLG----AD-ETAKVSTDIEDV  237 (361)
Q Consensus       168 ~~~l~~~~~-~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~---~~~~~-~~~~lg----~~-~~~~~~~~~~~~  237 (361)
                      ..+++...+ -.|.++||+|+|++|.+++..+...|+..|+.+.++   .++.+ ++++++    .. ..+.+.    +.
T Consensus       142 ~~~L~~~~~~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~----~~  217 (315)
T 3tnl_A          142 MRALKEAGHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIE----DH  217 (315)
T ss_dssp             HHHHHHTTCCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETT----CH
T ss_pred             HHHHHHcCCCccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccc----hH
Confidence            344554333 368899999999999999999999999778888887   55544 333332    21 122221    11


Q ss_pred             hHHHHHHHhhcCCCccEEEEccCC
Q 018075          238 DTDVGKIQNAMGSGIDVSFDCVGF  261 (361)
Q Consensus       238 ~~~~~~~~~~~~~~~d~vld~~g~  261 (361)
                      . .+.+.    -..+|+|++|++.
T Consensus       218 ~-~l~~~----l~~aDiIINaTp~  236 (315)
T 3tnl_A          218 E-QLRKE----IAESVIFTNATGV  236 (315)
T ss_dssp             H-HHHHH----HHTCSEEEECSST
T ss_pred             H-HHHhh----hcCCCEEEECccC
Confidence            1 12211    1369999998863

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=96.26  E-value=0.023  Score=48.92  Aligned_cols=105  Identities=11%  Similarity=0.098  Sum_probs=64.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH---HHHcCCC-EEeecC-CCccchhHHHHHHHhhcCCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI---ARNLGAD-ETAKVS-TDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~---~~~lg~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~  251 (361)
                      +|+.+||.| ++++|.+.++.+...|+ .|+.+++++++.+.   +.+.+.. ..+..+ ++..+..+.+.+..+.. ++
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~-G~   83 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERA-IPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATF-GR   83 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH-SC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHh-CC
Confidence            688999998 58999999998888999 57777776654333   3333422 222211 23334444444444322 47


Q ss_pred             ccEEEEccCCh---------H---------------HHHHHHHhhc-CCCEEEEEccC
Q 018075          252 IDVSFDCVGFD---------K---------------TMSTALNATR-PGGKVCLIGLA  284 (361)
Q Consensus       252 ~d~vld~~g~~---------~---------------~~~~~~~~l~-~~G~~v~~g~~  284 (361)
                      +|+++++.|..         +               ..+..++.|. .+|++|.++..
T Consensus        84 iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~  141 (258)
T 4gkb_A           84 LDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSK  141 (258)
T ss_dssp             CCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCT
T ss_pred             CCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeeh
Confidence            99999998752         1               2333444553 46999988743

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=96.26  E-value=0.024  Score=49.13  Aligned_cols=98  Identities=11%  Similarity=0.102  Sum_probs=63.9

Q ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHH-HHHHHcCCCEEeecCCCccchhHHHHHHHhh
Q 018075          169 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRL-SIARNLGADETAKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       169 ~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~-~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~  247 (361)
                      .+++...+..+.++||+|+|+.|.+++..+...|+..+.++.++.+|. +++++++...  .  .   +.       .  
T Consensus       109 ~~l~~~~~~~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~~--~--~---~~-------~--  172 (271)
T 1npy_A          109 KLIEKYHLNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAY--I--N---SL-------E--  172 (271)
T ss_dssp             HHHHHTTCCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEE--E--S---CC-------T--
T ss_pred             HHHHHhCCCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCcc--c--h---hh-------h--
Confidence            344444455678999999999999999988889987788888887764 5666676521  1  1   10       0  


Q ss_pred             cCCCccEEEEccCChHHH-------HHHHHhhcCCCEEEEEcc
Q 018075          248 MGSGIDVSFDCVGFDKTM-------STALNATRPGGKVCLIGL  283 (361)
Q Consensus       248 ~~~~~d~vld~~g~~~~~-------~~~~~~l~~~G~~v~~g~  283 (361)
                       ...+|+|+++++..-..       .-....+.++..++.+-.
T Consensus       173 -~~~~DivInaTp~gm~~~~~~~~~~~~~~~l~~~~~v~DlvY  214 (271)
T 1npy_A          173 -NQQADILVNVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVVA  214 (271)
T ss_dssp             -TCCCSEEEECSSTTCTTSTTTTSCSSCHHHHHHCSEEEECCC
T ss_pred             -cccCCEEEECCCCCccCccccCCCCCCHHHcCCCCEEEEeec
Confidence             14699999998854110       001245566666666544

>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A

Probab=96.25  E-value=0.023  Score=52.93  Aligned_cols=103  Identities=17%  Similarity=0.168  Sum_probs=68.0

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhh
Q 018075          172 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       172 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~  247 (361)
                      ...+.++|++||-+|||+ |..+.++++..+...+++++.++.+.+.+++    +|....+ ...+..++..   .+   
T Consensus       240 ~~l~~~~g~~VLDlgaG~-G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~-~~~D~~~~~~---~~---  311 (429)
T 1sqg_A          240 TWLAPQNGEHILDLCAAP-GGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATV-KQGDGRYPSQ---WC---  311 (429)
T ss_dssp             HHHCCCTTCEEEEESCTT-CHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEE-EECCTTCTHH---HH---
T ss_pred             HHcCCCCcCeEEEECCCc-hHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEE-EeCchhhchh---hc---
Confidence            345678999999999877 7777888888753479999999988776654    4543211 1122122211   11   


Q ss_pred             cCCCccEEEE---ccCCh-------------------------HHHHHHHHhhcCCCEEEEEc
Q 018075          248 MGSGIDVSFD---CVGFD-------------------------KTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       248 ~~~~~d~vld---~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g  282 (361)
                      .+..||.|+-   |+|..                         ..+..+++.|+|||+++...
T Consensus       312 ~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvyst  374 (429)
T 1sqg_A          312 GEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYAT  374 (429)
T ss_dssp             TTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             ccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence            2357999986   44421                         35777888999999998753

>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=96.25  E-value=0.0023  Score=54.38  Aligned_cols=99  Identities=11%  Similarity=0.044  Sum_probs=64.1

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCC---CEEeecCCCccchhHHHHHHHhhcCCCc
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA---DETAKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      .+++.+||-+|||. |..+..+++. +...+++++.+++..+.+++...   ..+....   .+..+...   ......|
T Consensus        58 ~~~~~~vLDiGcGt-G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~---~d~~~~~~---~~~~~~f  129 (236)
T 1zx0_A           58 SSKGGRVLEVGFGM-AIAASKVQEA-PIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLK---GLWEDVAP---TLPDGHF  129 (236)
T ss_dssp             TTTCEEEEEECCTT-SHHHHHHHTS-CEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEE---SCHHHHGG---GSCTTCE
T ss_pred             CCCCCeEEEEeccC-CHHHHHHHhc-CCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEe---cCHHHhhc---ccCCCce
Confidence            57889999999875 7777777554 44379999999998888776431   2221111   23222111   1123579


Q ss_pred             cEEEE-ccC----Ch------HHHHHHHHhhcCCCEEEEEc
Q 018075          253 DVSFD-CVG----FD------KTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       253 d~vld-~~g----~~------~~~~~~~~~l~~~G~~v~~g  282 (361)
                      |+|+. +..    ..      ..+..+.+.|+|||+++.+.
T Consensus       130 D~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~  170 (236)
T 1zx0_A          130 DGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN  170 (236)
T ss_dssp             EEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred             EEEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEe
Confidence            99987 222    11      23778899999999998764

>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*

Probab=96.25  E-value=0.015  Score=46.33  Aligned_cols=102  Identities=19%  Similarity=0.212  Sum_probs=63.3

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHh-hcCCCc
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN-AMGSGI  252 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  252 (361)
                      .++++++||-+|+|. |..+..+++..|. ..+++++.++ ..+.    .-...+.  .+..+.. ....+.. .....+
T Consensus        19 ~~~~~~~vLd~G~G~-G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----~~~~~~~--~d~~~~~-~~~~~~~~~~~~~~   89 (180)
T 1ej0_A           19 LFKPGMTVVDLGAAP-GGWSQYVVTQIGGKGRIIACDLLP-MDPI----VGVDFLQ--GDFRDEL-VMKALLERVGDSKV   89 (180)
T ss_dssp             CCCTTCEEEEESCTT-CHHHHHHHHHHCTTCEEEEEESSC-CCCC----TTEEEEE--SCTTSHH-HHHHHHHHHTTCCE
T ss_pred             CCCCCCeEEEeCCCC-CHHHHHHHHHhCCCCeEEEEECcc-cccc----CcEEEEE--cccccch-hhhhhhccCCCCce
Confidence            378999999999887 8888888888642 3799999887 3321    1111122  1111111 1111111 124679


Q ss_pred             cEEEEc-----cCC------------hHHHHHHHHhhcCCCEEEEEccCC
Q 018075          253 DVSFDC-----VGF------------DKTMSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       253 d~vld~-----~g~------------~~~~~~~~~~l~~~G~~v~~g~~~  285 (361)
                      |+|+..     .+.            ...++.+.+.|+++|+++......
T Consensus        90 D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~  139 (180)
T 1ej0_A           90 QVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG  139 (180)
T ss_dssp             EEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS
T ss_pred             eEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC
Confidence            999983     222            246788889999999999765433

>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*

Probab=96.25  E-value=0.012  Score=52.00  Aligned_cols=99  Identities=14%  Similarity=0.166  Sum_probs=65.8

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcC--------CCEEeecCCCccchhHHHHHHHhh
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG--------ADETAKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg--------~~~~~~~~~~~~~~~~~~~~~~~~  247 (361)
                      ..++.+||++|+|. |..+..+++..+...+++++.+++..+.+++.-        ...+....   .+..+.+..    
T Consensus        93 ~~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~---~Da~~~l~~----  164 (304)
T 2o07_A           93 HPNPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHV---GDGFEFMKQ----  164 (304)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE---SCHHHHHHT----
T ss_pred             CCCCCEEEEECCCc-hHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEE---CcHHHHHhh----
Confidence            45678999999775 777778887765558999999999888877631        11111111   233222221    


Q ss_pred             cCCCccEEEEccCC----------hHHHHHHHHhhcCCCEEEEEc
Q 018075          248 MGSGIDVSFDCVGF----------DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       248 ~~~~~d~vld~~g~----------~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ....||+|+.....          ...++.+.+.|+|+|.++.-.
T Consensus       165 ~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  209 (304)
T 2o07_A          165 NQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG  209 (304)
T ss_dssp             CSSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence            24679999853322          236888999999999998754

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=96.25  E-value=0.084  Score=45.67  Aligned_cols=82  Identities=23%  Similarity=0.309  Sum_probs=50.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhH--------HH---HHHHcCCCE-EeecC-CCccchhHHHHH
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQR--------LS---IARNLGADE-TAKVS-TDIEDVDTDVGK  243 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~--------~~---~~~~lg~~~-~~~~~-~~~~~~~~~~~~  243 (361)
                      .|.++||.| ++++|.+.++.+...|+ .|+.++++.++        .+   .+++.+... .+..+ .+..+..+.+.+
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   83 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGA-NVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAA   83 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHH
Confidence            578899998 59999999998888999 67777776532        12   223334322 11111 223344444444


Q ss_pred             HHhhcCCCccEEEEccCC
Q 018075          244 IQNAMGSGIDVSFDCVGF  261 (361)
Q Consensus       244 ~~~~~~~~~d~vld~~g~  261 (361)
                      +.+.. +++|+++++.|.
T Consensus        84 ~~~~~-g~iD~lvnnAG~  100 (274)
T 3e03_A           84 TVDTF-GGIDILVNNASA  100 (274)
T ss_dssp             HHHHH-SCCCEEEECCCC
T ss_pred             HHHHc-CCCCEEEECCCc
Confidence            44322 479999999884

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=96.24  E-value=0.089  Score=45.31  Aligned_cols=81  Identities=14%  Similarity=0.213  Sum_probs=49.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HHHc---C-CCEEeecCCCccchhHHHHHHHhhcCCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNL---G-ADETAKVSTDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~l---g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (361)
                      .|.++||.| +|++|.+.++.+...|+ .|+.+++++++.+. ++++   + ...+..+..+..+. +.+.++.+. -++
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~-~~~~~~~~~-~g~   85 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTE-QGCQDVIEK-YPK   85 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSH-HHHHHHHHH-CCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCH-HHHHHHHHh-cCC
Confidence            578899998 59999999998888999 68888888765432 2222   2 11111111111222 223333221 247


Q ss_pred             ccEEEEccCC
Q 018075          252 IDVSFDCVGF  261 (361)
Q Consensus       252 ~d~vld~~g~  261 (361)
                      +|+++++.|.
T Consensus        86 id~lv~nAg~   95 (267)
T 3t4x_A           86 VDILINNLGI   95 (267)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}

Probab=96.24  E-value=0.015  Score=48.42  Aligned_cols=101  Identities=20%  Similarity=0.208  Sum_probs=68.3

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCcc
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      ....++.+||-+|||. |..+..+++. |. .+++++.+++..+.+++.+......     .++.... ......+..||
T Consensus        48 ~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~-----~~~~~~~-~~~~~~~~~fD  118 (227)
T 3e8s_A           48 ILGRQPERVLDLGCGE-GWLLRALADR-GI-EAVGVDGDRTLVDAARAAGAGEVHL-----ASYAQLA-EAKVPVGKDYD  118 (227)
T ss_dssp             HHHTCCSEEEEETCTT-CHHHHHHHTT-TC-EEEEEESCHHHHHHHHHTCSSCEEE-----CCHHHHH-TTCSCCCCCEE
T ss_pred             hhcCCCCEEEEeCCCC-CHHHHHHHHC-CC-EEEEEcCCHHHHHHHHHhcccccch-----hhHHhhc-ccccccCCCcc
Confidence            3346779999999876 7777777776 77 7999999999999888874333222     1221110 00111234599


Q ss_pred             EEEEccC-----ChHHHHHHHHhhcCCCEEEEEcc
Q 018075          254 VSFDCVG-----FDKTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       254 ~vld~~g-----~~~~~~~~~~~l~~~G~~v~~g~  283 (361)
                      +|+....     ....++.+.+.|+|||+++....
T Consensus       119 ~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~  153 (227)
T 3e8s_A          119 LICANFALLHQDIIELLSAMRTLLVPGGALVIQTL  153 (227)
T ss_dssp             EEEEESCCCSSCCHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             EEEECchhhhhhHHHHHHHHHHHhCCCeEEEEEec
Confidence            9987532     23578899999999999998654

>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*

Probab=96.24  E-value=0.017  Score=54.11  Aligned_cols=99  Identities=20%  Similarity=0.243  Sum_probs=66.4

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhhc
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      ..+++|++||=+|||+ |..++++|+.++ ...|++++.++++.+.+++    +|.. +....   .+.......    .
T Consensus        97 L~~~~g~~VLDlgaGp-G~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~---~Da~~l~~~----~  167 (464)
T 3m6w_A           97 LDPKPGERVLDLAAAP-GGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQ---APPRALAEA----F  167 (464)
T ss_dssp             HCCCTTCEEEESSCTT-CHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEEC---SCHHHHHHH----H
T ss_pred             cCcCCCCEEEEEcCCc-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEE---CCHHHhhhh----c
Confidence            4678999999988766 667778887764 2379999999998876654    5765 33322   233222111    1


Q ss_pred             CCCccEEEE---ccCC-------------------------hHHHHHHHHhhcCCCEEEEE
Q 018075          249 GSGIDVSFD---CVGF-------------------------DKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       249 ~~~~d~vld---~~g~-------------------------~~~~~~~~~~l~~~G~~v~~  281 (361)
                      ...||.|+-   |+|.                         ...+..+++.|+|||+++..
T Consensus       168 ~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~Lvys  228 (464)
T 3m6w_A          168 GTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYS  228 (464)
T ss_dssp             CSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred             cccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence            467999984   4331                         23567788899999999863

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=96.24  E-value=0.013  Score=50.57  Aligned_cols=84  Identities=17%  Similarity=0.296  Sum_probs=52.5

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcC---CCEEEEEeCChhHHHHHHHc---CCC-EEeecC-CCccchhHHHHHHHhh
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFG---APRIIITDVDVQRLSIARNL---GAD-ETAKVS-TDIEDVDTDVGKIQNA  247 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g---~~~vv~v~~~~~~~~~~~~l---g~~-~~~~~~-~~~~~~~~~~~~~~~~  247 (361)
                      .++.++||.| +|++|.+.++.+...|   + .|+.++++.++.+.++++   +.. ..+..+ .+..+..+.+.++...
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   97 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGV   97 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCc-EEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHh
Confidence            4567899998 5999999999888889   6 688888876644433332   322 122211 2334444555544432


Q ss_pred             cCC-CccEEEEccCC
Q 018075          248 MGS-GIDVSFDCVGF  261 (361)
Q Consensus       248 ~~~-~~d~vld~~g~  261 (361)
                      .+. ++|++|++.|.
T Consensus        98 ~g~~~id~li~~Ag~  112 (267)
T 1sny_A           98 TKDQGLNVLFNNAGI  112 (267)
T ss_dssp             HGGGCCSEEEECCCC
T ss_pred             cCCCCccEEEECCCc
Confidence            232 69999999873

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=96.23  E-value=0.026  Score=47.51  Aligned_cols=81  Identities=22%  Similarity=0.233  Sum_probs=51.6

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcCCCEEeecC-CCccchhHHHHHHHhhcCCCccEE
Q 018075          179 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADETAKVS-TDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       179 g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      +.++||.| +|++|.+.++.+...|+ .|+.++++.++.+.+ ++++....+..+ .+..++.+.+.++.+.. +++|++
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id~l   82 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGY-RVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAF-GELSAL   82 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHH-SCCCEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHc-CCCCEE
Confidence            56899998 69999999998888999 688888887766543 344322222211 22233334444433222 479999


Q ss_pred             EEccCC
Q 018075          256 FDCVGF  261 (361)
Q Consensus       256 ld~~g~  261 (361)
                      +++.|.
T Consensus        83 i~~Ag~   88 (234)
T 2ehd_A           83 VNNAGV   88 (234)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999873

>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*

Probab=96.23  E-value=0.017  Score=49.79  Aligned_cols=103  Identities=16%  Similarity=0.218  Sum_probs=68.6

Q ss_pred             HHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCE-EeecCCCccchhHHHHH
Q 018075          170 ACRRA-NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADE-TAKVSTDIEDVDTDVGK  243 (361)
Q Consensus       170 ~l~~~-~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~-~~~~~~~~~~~~~~~~~  243 (361)
                      .+... .++++.+||-+|||. |..+..+++.-+. .+++++.+++..+.+++    .|... +.....+..++.     
T Consensus        37 ~l~~l~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-----  109 (267)
T 3kkz_A           37 ALSFIDNLTEKSLIADIGCGT-GGQTMVLAGHVTG-QVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLP-----  109 (267)
T ss_dssp             HHTTCCCCCTTCEEEEETCTT-CHHHHHHHTTCSS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-----
T ss_pred             HHHhcccCCCCCEEEEeCCCC-CHHHHHHHhccCC-EEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCC-----
Confidence            34443 478999999999886 8888889888444 79999999987776655    34321 111111111110     


Q ss_pred             HHhhcCCCccEEEEcc-----CChHHHHHHHHhhcCCCEEEEEc
Q 018075          244 IQNAMGSGIDVSFDCV-----GFDKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       244 ~~~~~~~~~d~vld~~-----g~~~~~~~~~~~l~~~G~~v~~g  282 (361)
                         .....||+|+...     +....++.+.+.|+|||+++...
T Consensus       110 ---~~~~~fD~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  150 (267)
T 3kkz_A          110 ---FRNEELDLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSE  150 (267)
T ss_dssp             ---CCTTCEEEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             ---CCCCCEEEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEE
Confidence               0135799998632     33356888889999999999875

>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}

Probab=96.21  E-value=0.014  Score=49.32  Aligned_cols=97  Identities=15%  Similarity=0.270  Sum_probs=66.3

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCC-EEeecCCCccchhHHHHHHHhhcCCCccE
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD-ETAKVSTDIEDVDTDVGKIQNAMGSGIDV  254 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  254 (361)
                      ++++.+||-+|||. |..+..+++. |. .+++++.+++..+.+++.... .+.....+..+..        .....+|+
T Consensus        51 ~~~~~~vLDiG~G~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~--------~~~~~fD~  119 (242)
T 3l8d_A           51 VKKEAEVLDVGCGD-GYGTYKLSRT-GY-KAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLP--------FENEQFEA  119 (242)
T ss_dssp             SCTTCEEEEETCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCS--------SCTTCEEE
T ss_pred             cCCCCeEEEEcCCC-CHHHHHHHHc-CC-eEEEEECCHHHHHHHHhhcccCCceEEEcchhcCC--------CCCCCccE
Confidence            56889999999876 7777777776 77 799999999999988876321 1111111111110        11467999


Q ss_pred             EEEccCC------hHHHHHHHHhhcCCCEEEEEcc
Q 018075          255 SFDCVGF------DKTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       255 vld~~g~------~~~~~~~~~~l~~~G~~v~~g~  283 (361)
                      |+....-      ...++.+.+.|+|||+++....
T Consensus       120 v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~  154 (242)
T 3l8d_A          120 IMAINSLEWTEEPLRALNEIKRVLKSDGYACIAIL  154 (242)
T ss_dssp             EEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEEc
Confidence            9874321      1478889999999999988753

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=96.21  E-value=0.062  Score=46.56  Aligned_cols=82  Identities=22%  Similarity=0.227  Sum_probs=50.1

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeC-------------ChhHHHH----HHHcCCCEE-eecC-CCccch
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDV-------------DVQRLSI----ARNLGADET-AKVS-TDIEDV  237 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~-------------~~~~~~~----~~~lg~~~~-~~~~-~~~~~~  237 (361)
                      .|.++||.| ++++|.+.++.+...|+ .|+.+++             +.++.+.    +++.+.... +..+ .+..+.
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRL   88 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            578999998 59999999998888999 6777766             3443322    223343221 1111 222334


Q ss_pred             hHHHHHHHhhcCCCccEEEEccCC
Q 018075          238 DTDVGKIQNAMGSGIDVSFDCVGF  261 (361)
Q Consensus       238 ~~~~~~~~~~~~~~~d~vld~~g~  261 (361)
                      .+.+.++.+.. +++|+++++.|.
T Consensus        89 ~~~~~~~~~~~-g~id~lvnnAg~  111 (277)
T 3tsc_A           89 RKVVDDGVAAL-GRLDIIVANAGV  111 (277)
T ss_dssp             HHHHHHHHHHH-SCCCEEEECCCC
T ss_pred             HHHHHHHHHHc-CCCCEEEECCCC
Confidence            44444443322 479999998874

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=96.21  E-value=0.022  Score=50.15  Aligned_cols=96  Identities=15%  Similarity=0.146  Sum_probs=63.5

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHH-HHHHHcCCC--EEeecCCCccchhHHHHHHHhhcCCCcc
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRL-SIARNLGAD--ETAKVSTDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~-~~~~~lg~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      -++.+++|+|+|++|.+++..+...|+..|++++++.++. +++++++..  .+.       ++. .+.+.    -.++|
T Consensus       139 l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~-------~~~-~~~~~----~~~aD  206 (297)
T 2egg_A          139 LDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYF-------SLA-EAETR----LAEYD  206 (297)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEE-------CHH-HHHHT----GGGCS
T ss_pred             CCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCcee-------eHH-HHHhh----hccCC
Confidence            3688999999999999999999999987788888888775 466666652  111       111 12111    24799


Q ss_pred             EEEEccCChHHH-----HHHHHhhcCCCEEEEEccC
Q 018075          254 VSFDCVGFDKTM-----STALNATRPGGKVCLIGLA  284 (361)
Q Consensus       254 ~vld~~g~~~~~-----~~~~~~l~~~G~~v~~g~~  284 (361)
                      +|++|++.....     .-....+.++..++.+...
T Consensus       207 ivIn~t~~~~~~~~~~~~i~~~~l~~~~~v~D~~y~  242 (297)
T 2egg_A          207 IIINTTSVGMHPRVEVQPLSLERLRPGVIVSDIIYN  242 (297)
T ss_dssp             EEEECSCTTCSSCCSCCSSCCTTCCTTCEEEECCCS
T ss_pred             EEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEcCCC
Confidence            999999865210     0012346677766666553

>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}

Probab=96.21  E-value=0.016  Score=50.25  Aligned_cols=100  Identities=21%  Similarity=0.325  Sum_probs=67.8

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc----CCCEEeecCCCccchhHHHHHHHhhcC
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      ..+.++.+||-+|||. |..+..+++......+++++.+++..+.+++.    +...+.....   +....    . ...
T Consensus        33 ~~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~---d~~~~----~-~~~  103 (276)
T 3mgg_A           33 TVYPPGAKVLEAGCGI-GAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQA---NIFSL----P-FED  103 (276)
T ss_dssp             CCCCTTCEEEETTCTT-SHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEEC---CGGGC----C-SCT
T ss_pred             ccCCCCCeEEEecCCC-CHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEc---ccccC----C-CCC
Confidence            5678999999999876 77888888886333899999999877766553    4332211111   11110    0 124


Q ss_pred             CCccEEEEcc------CChHHHHHHHHhhcCCCEEEEEc
Q 018075          250 SGIDVSFDCV------GFDKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       250 ~~~d~vld~~------g~~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ..+|+|+...      .....+..+.+.|+|||.++...
T Consensus       104 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~  142 (276)
T 3mgg_A          104 SSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIE  142 (276)
T ss_dssp             TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEE
Confidence            6799998743      22347888999999999999865

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=96.21  E-value=0.029  Score=49.82  Aligned_cols=90  Identities=19%  Similarity=0.174  Sum_probs=66.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  256 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  256 (361)
                      -.|.+|.|+|.|.+|...++.++..|+ .|++.+++.++. .++++|+..     .   ++.+.+        ...|+|+
T Consensus       140 l~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~g~~~-----~---~l~ell--------~~aDvVv  201 (313)
T 2ekl_A          140 LAGKTIGIVGFGRIGTKVGIIANAMGM-KVLAYDILDIRE-KAEKINAKA-----V---SLEELL--------KNSDVIS  201 (313)
T ss_dssp             CTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSCCHH-HHHHTTCEE-----C---CHHHHH--------HHCSEEE
T ss_pred             CCCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCcchh-HHHhcCcee-----c---CHHHHH--------hhCCEEE
Confidence            367899999999999999999999999 688888877664 456777642     1   222222        2589999


Q ss_pred             EccCChH----HH-HHHHHhhcCCCEEEEEccC
Q 018075          257 DCVGFDK----TM-STALNATRPGGKVCLIGLA  284 (361)
Q Consensus       257 d~~g~~~----~~-~~~~~~l~~~G~~v~~g~~  284 (361)
                      .++....    .+ ...+..|++++.++.++..
T Consensus       202 l~~P~~~~t~~li~~~~l~~mk~ga~lIn~arg  234 (313)
T 2ekl_A          202 LHVTVSKDAKPIIDYPQFELMKDNVIIVNTSRA  234 (313)
T ss_dssp             ECCCCCTTSCCSBCHHHHHHSCTTEEEEESSCG
T ss_pred             EeccCChHHHHhhCHHHHhcCCCCCEEEECCCC
Confidence            9887432    11 4677889999988877654

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=96.20  E-value=0.021  Score=47.62  Aligned_cols=98  Identities=12%  Similarity=0.087  Sum_probs=60.0

Q ss_pred             CEEEEEC-CCHHHHHHHHHHH-HcCCCEEEEEeCChh-HHHHHHHcCCC-EEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          180 TNVMIMG-SGPIGLVTLLAAR-AFGAPRIIITDVDVQ-RLSIARNLGAD-ETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       180 ~~vlI~G-~g~~G~~ai~la~-~~g~~~vv~v~~~~~-~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      .++||.| +|.+|.+.++.+. ..|+ .|++++++++ +.+.+...+.. ..+..  +-.+. +.+.+..    .++|++
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~--D~~d~-~~~~~~~----~~~d~v   77 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDM-HITLYGRQLKTRIPPEIIDHERVTVIEG--SFQNP-GXLEQAV----TNAEVV   77 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCC-EEEEEESSHHHHSCHHHHTSTTEEEEEC--CTTCH-HHHHHHH----TTCSEE
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecCccccchhhccCCCceEEEEC--CCCCH-HHHHHHH----cCCCEE
Confidence            4599999 5999999998777 7999 6888888877 65544322222 22221  11222 2222222    379999


Q ss_pred             EEccCChHH-HHHHHHhhcC--CCEEEEEccCC
Q 018075          256 FDCVGFDKT-MSTALNATRP--GGKVCLIGLAK  285 (361)
Q Consensus       256 ld~~g~~~~-~~~~~~~l~~--~G~~v~~g~~~  285 (361)
                      +++.|.... .+.+++.+..  .++++.++...
T Consensus        78 v~~ag~~n~~~~~~~~~~~~~~~~~iv~iSs~~  110 (221)
T 3r6d_A           78 FVGAMESGSDMASIVKALSRXNIRRVIGVSMAG  110 (221)
T ss_dssp             EESCCCCHHHHHHHHHHHHHTTCCEEEEEEETT
T ss_pred             EEcCCCCChhHHHHHHHHHhcCCCeEEEEeece
Confidence            999986311 3445555543  36898876443

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=96.20  E-value=0.031  Score=50.74  Aligned_cols=93  Identities=13%  Similarity=0.212  Sum_probs=64.2

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEcc
Q 018075          180 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV  259 (361)
Q Consensus       180 ~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  259 (361)
                      -+|+|+|+|.+|..+++.+.. .. .|..++.+.++.+.++++.....++  .  .+.. .+.++.    .+.|+|++++
T Consensus        17 mkilvlGaG~vG~~~~~~L~~-~~-~v~~~~~~~~~~~~~~~~~~~~~~d--~--~d~~-~l~~~~----~~~DvVi~~~   85 (365)
T 3abi_A           17 MKVLILGAGNIGRAIAWDLKD-EF-DVYIGDVNNENLEKVKEFATPLKVD--A--SNFD-KLVEVM----KEFELVIGAL   85 (365)
T ss_dssp             CEEEEECCSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHTTTSEEEECC--T--TCHH-HHHHHH----TTCSEEEECC
T ss_pred             cEEEEECCCHHHHHHHHHHhc-CC-CeEEEEcCHHHHHHHhccCCcEEEe--c--CCHH-HHHHHH----hCCCEEEEec
Confidence            479999999999998887754 34 5777888888887776543222222  2  1222 233322    4789999999


Q ss_pred             CChHHHHHHHHhhcCCCEEEEEcc
Q 018075          260 GFDKTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       260 g~~~~~~~~~~~l~~~G~~v~~g~  283 (361)
                      +..-+..-+-.++..+-+++.+..
T Consensus        86 p~~~~~~v~~~~~~~g~~yvD~s~  109 (365)
T 3abi_A           86 PGFLGFKSIKAAIKSKVDMVDVSF  109 (365)
T ss_dssp             CGGGHHHHHHHHHHHTCEEEECCC
T ss_pred             CCcccchHHHHHHhcCcceEeeec
Confidence            966566667778888888888753

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=96.20  E-value=0.039  Score=47.55  Aligned_cols=77  Identities=18%  Similarity=0.192  Sum_probs=48.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  256 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  256 (361)
                      +|+++||.| ++++|.+.++.+...|+ .|+.++++++.. ..+.+  ....++ .+.++....+.++.+. -+++|+++
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~-~~~~~--~~~~Dv-~~~~~v~~~~~~~~~~-~G~iDilV   83 (261)
T 4h15_A           10 RGKRALITAGTKGAGAATVSLFLELGA-QVLTTARARPEG-LPEEL--FVEADL-TTKEGCAIVAEATRQR-LGGVDVIV   83 (261)
T ss_dssp             TTCEEEESCCSSHHHHHHHHHHHHTTC-EEEEEESSCCTT-SCTTT--EEECCT-TSHHHHHHHHHHHHHH-TSSCSEEE
T ss_pred             CCCEEEEeccCcHHHHHHHHHHHHcCC-EEEEEECCchhC-CCcEE--EEEcCC-CCHHHHHHHHHHHHHH-cCCCCEEE
Confidence            689999998 58999999999999999 577777654321 11111  111222 2333444444444332 35799999


Q ss_pred             EccC
Q 018075          257 DCVG  260 (361)
Q Consensus       257 d~~g  260 (361)
                      ++.|
T Consensus        84 nnAG   87 (261)
T 4h15_A           84 HMLG   87 (261)
T ss_dssp             ECCC
T ss_pred             ECCC
Confidence            9876

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=96.19  E-value=0.025  Score=49.23  Aligned_cols=82  Identities=18%  Similarity=0.288  Sum_probs=52.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HHH---cCCC--EE--eecC-CCccchhHHHHHHHhh
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARN---LGAD--ET--AKVS-TDIEDVDTDVGKIQNA  247 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~---lg~~--~~--~~~~-~~~~~~~~~~~~~~~~  247 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+. +++   .+..  .+  +..+ .+..+..+.+.++.+.
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   88 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW   88 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            578999998 69999999998888999 68888888776433 222   3321  11  1111 2223344444444332


Q ss_pred             cCCCccEEEEccCC
Q 018075          248 MGSGIDVSFDCVGF  261 (361)
Q Consensus       248 ~~~~~d~vld~~g~  261 (361)
                      . +++|+++++.|.
T Consensus        89 ~-g~id~lv~nAg~  101 (281)
T 3svt_A           89 H-GRLHGVVHCAGG  101 (281)
T ss_dssp             H-SCCCEEEECCCC
T ss_pred             c-CCCCEEEECCCc
Confidence            2 479999999885

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=96.19  E-value=0.048  Score=46.38  Aligned_cols=82  Identities=16%  Similarity=0.281  Sum_probs=49.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeC-ChhHHHH----HHHcCCCEE-eecC-CCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDV-DVQRLSI----ARNLGADET-AKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~-~~~~~~~----~~~lg~~~~-~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      .+.++||.| +|++|.+.++.+...|++ |+.+++ +.++.+.    +++.+.... +..+ .+..+..+.+.++.+.. 
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-   80 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYN-VAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF-   80 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-
Confidence            467889998 699999999988889994 555544 5444332    233343321 2111 22233444444443322 


Q ss_pred             CCccEEEEccCC
Q 018075          250 SGIDVSFDCVGF  261 (361)
Q Consensus       250 ~~~d~vld~~g~  261 (361)
                      +++|+++++.|.
T Consensus        81 g~id~lv~nAg~   92 (246)
T 3osu_A           81 GSLDVLVNNAGI   92 (246)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999874

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=96.18  E-value=0.052  Score=48.18  Aligned_cols=91  Identities=20%  Similarity=0.175  Sum_probs=64.7

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCC-EEEEEeCChhHHHHHHHcCCCEEeecCCCccchhH-HHHHHHhhcCCCccEEEE
Q 018075          180 TNVMIMGSGPIGLVTLLAARAFGAP-RIIITDVDVQRLSIARNLGADETAKVSTDIEDVDT-DVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       180 ~~vlI~G~g~~G~~ai~la~~~g~~-~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~vld  257 (361)
                      .+|.|+|+|.+|...++.++..|.. .|++.++++++.+.+.++|......  .   +..+ .        -.+.|+||-
T Consensus        34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~--~---~~~~~~--------~~~aDvVil  100 (314)
T 3ggo_A           34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGT--T---SIAKVE--------DFSPDFVML  100 (314)
T ss_dssp             SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEE--S---CTTGGG--------GGCCSEEEE
T ss_pred             CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhc--C---CHHHHh--------hccCCEEEE
Confidence            6899999999999999999888873 5888999999999888888632111  1   1111 1        136899999


Q ss_pred             ccCChH---HHHHHHHhhcCCCEEEEEcc
Q 018075          258 CVGFDK---TMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       258 ~~g~~~---~~~~~~~~l~~~G~~v~~g~  283 (361)
                      |+....   .+..+...++++..++.++.
T Consensus       101 avp~~~~~~vl~~l~~~l~~~~iv~d~~S  129 (314)
T 3ggo_A          101 SSPVRTFREIAKKLSYILSEDATVTDQGS  129 (314)
T ss_dssp             CSCGGGHHHHHHHHHHHSCTTCEEEECCS
T ss_pred             eCCHHHHHHHHHHHhhccCCCcEEEECCC
Confidence            988652   33445566777777766653

>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*

Probab=96.18  E-value=0.02  Score=51.12  Aligned_cols=98  Identities=17%  Similarity=0.187  Sum_probs=66.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCC--------EEeecCCCccchhHHHHHHHhhc
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD--------ETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~--------~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      .++.+||.+|+|. |..+..+++..+...+++++.+++..+.+++.-..        .+...   ..|..+.+..    .
T Consensus       115 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~---~~D~~~~l~~----~  186 (321)
T 2pt6_A          115 KEPKNVLVVGGGD-GGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVF---IEDASKFLEN----V  186 (321)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEE---ESCHHHHHHH----C
T ss_pred             CCCCEEEEEcCCc-cHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEE---EccHHHHHhh----c
Confidence            4568999999776 66777888776555899999999998888773211        11111   1233332222    2


Q ss_pred             CCCccEEEEccCC----------hHHHHHHHHhhcCCCEEEEEc
Q 018075          249 GSGIDVSFDCVGF----------DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       249 ~~~~d~vld~~g~----------~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ...||+|+.....          ...++.+.+.|+|+|.++.-.
T Consensus       187 ~~~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  230 (321)
T 2pt6_A          187 TNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC  230 (321)
T ss_dssp             CSCEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCCceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence            4679999854311          357888999999999998753

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.18  E-value=0.03  Score=48.28  Aligned_cols=83  Identities=20%  Similarity=0.219  Sum_probs=53.7

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-H---HcCCCE-EeecC-CCccchhHHHHHHHhhcC
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-R---NLGADE-TAKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~---~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      -.|.++||.| ++++|.+.++.+...|+ .|+.++++.++.+.+ +   +.+... .+..+ .+..+..+.+.++.+. -
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~   86 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKA-Y   86 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-T
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence            4678999998 58999999998888999 688888887765433 2   233322 12111 2233444444444432 3


Q ss_pred             CCccEEEEccCC
Q 018075          250 SGIDVSFDCVGF  261 (361)
Q Consensus       250 ~~~d~vld~~g~  261 (361)
                      +++|+++++.|.
T Consensus        87 g~id~lv~nAg~   98 (264)
T 3ucx_A           87 GRVDVVINNAFR   98 (264)
T ss_dssp             SCCSEEEECCCS
T ss_pred             CCCcEEEECCCC
Confidence            479999998864

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=96.18  E-value=0.064  Score=44.59  Aligned_cols=92  Identities=13%  Similarity=0.158  Sum_probs=59.5

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEcc
Q 018075          181 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV  259 (361)
Q Consensus       181 ~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  259 (361)
                      +|||.| +|.+|...+..+...|. .|+++++++++.+.+...+...+ ..+-  .+...  ..+     .++|+||++.
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~-~~D~--~d~~~--~~~-----~~~d~vi~~a   70 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGH-EVLAVVRDPQKAADRLGATVATL-VKEP--LVLTE--ADL-----DSVDAVVDAL   70 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHTCTTSEEE-ECCG--GGCCH--HHH-----TTCSEEEECC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCC-EEEEEEecccccccccCCCceEE-eccc--ccccH--hhc-----ccCCEEEECC
Confidence            689999 59999999998888898 68888888877665443344332 2111  11111  212     4799999999


Q ss_pred             CCh----------HHHHHHHHhhc-CCCEEEEEcc
Q 018075          260 GFD----------KTMSTALNATR-PGGKVCLIGL  283 (361)
Q Consensus       260 g~~----------~~~~~~~~~l~-~~G~~v~~g~  283 (361)
                      |..          .....+++.+. .+++++.++.
T Consensus        71 g~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS  105 (224)
T 3h2s_A           71 SVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILG  105 (224)
T ss_dssp             CCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEECC
T ss_pred             ccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEEec
Confidence            862          13344555554 3478888853

>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46

Probab=96.18  E-value=0.02  Score=45.94  Aligned_cols=100  Identities=12%  Similarity=0.094  Sum_probs=63.4

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCC-EEeecCCCccchhHHHHHHHhhcCC
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGAD-ETAKVSTDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~  250 (361)
                      ..++++||-+|||. |..++.+++. +...+++++.+++..+.+++    .+.. .+....   .++.+.+..    ...
T Consensus        29 ~~~~~~vLDlGcG~-G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~---~d~~~~~~~----~~~   99 (177)
T 2esr_A           29 YFNGGRVLDLFAGS-GGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLK---MEAERAIDC----LTG   99 (177)
T ss_dssp             CCCSCEEEEETCTT-CHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEEC---SCHHHHHHH----BCS
T ss_pred             hcCCCeEEEeCCCC-CHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEE---CcHHHhHHh----hcC
Confidence            67889999999875 6667777776 65589999999988777665    3332 121111   233332222    235


Q ss_pred             CccEEEEccCC-----hHHHHHHH--HhhcCCCEEEEEccC
Q 018075          251 GIDVSFDCVGF-----DKTMSTAL--NATRPGGKVCLIGLA  284 (361)
Q Consensus       251 ~~d~vld~~g~-----~~~~~~~~--~~l~~~G~~v~~g~~  284 (361)
                      .+|+|+-...-     ...+..+.  +.|+++|.++..-..
T Consensus       100 ~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~  140 (177)
T 2esr_A          100 RFDLVFLDPPYAKETIVATIEALAAKNLLSEQVMVVCETDK  140 (177)
T ss_dssp             CEEEEEECCSSHHHHHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred             CCCEEEECCCCCcchHHHHHHHHHhCCCcCCCcEEEEEECC
Confidence            69999875331     12344444  778999999876433

>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}

Probab=96.17  E-value=0.011  Score=49.02  Aligned_cols=94  Identities=15%  Similarity=0.136  Sum_probs=65.8

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc-CCCEEeecCCCccchhHHHHHHHhhcCCCc
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL-GADETAKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      ..+.++.+||-+|||. |..+..+++. |. .+++++.+++..+.+++. +.....      .++...    .  ....|
T Consensus        39 ~~~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~------~d~~~~----~--~~~~f  103 (211)
T 3e23_A           39 GELPAGAKILELGCGA-GYQAEAMLAA-GF-DVDATDGSPELAAEASRRLGRPVRT------MLFHQL----D--AIDAY  103 (211)
T ss_dssp             TTSCTTCEEEESSCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHTSCCEE------CCGGGC----C--CCSCE
T ss_pred             HhcCCCCcEEEECCCC-CHHHHHHHHc-CC-eEEEECCCHHHHHHHHHhcCCceEE------eeeccC----C--CCCcE
Confidence            3567899999999876 7777777776 77 799999999988887775 433221      111111    0  24679


Q ss_pred             cEEEEccCC--------hHHHHHHHHhhcCCCEEEEEc
Q 018075          253 DVSFDCVGF--------DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       253 d~vld~~g~--------~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      |+|+....-        ...++.+.+.|+|||+++..-
T Consensus       104 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  141 (211)
T 3e23_A          104 DAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASY  141 (211)
T ss_dssp             EEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence            999975321        146788889999999998764

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=96.16  E-value=0.086  Score=45.88  Aligned_cols=82  Identities=16%  Similarity=0.225  Sum_probs=49.9

Q ss_pred             CCCEEEEEC-C--CHHHHHHHHHHHHcCCCEEEEEeCChh---HHHHH-HHcCCCEEeecC-CCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMG-S--GPIGLVTLLAARAFGAPRIIITDVDVQ---RLSIA-RNLGADETAKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G-~--g~~G~~ai~la~~~g~~~vv~v~~~~~---~~~~~-~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      .|.++||.| +  |++|.+.++.+...|+ .|+.++++.+   ..+.+ ++.+....+..+ .+..+....+.++.+. -
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~   97 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGA-QLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEEN-W   97 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH-T
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence            568899998 5  7999999998888899 5777777764   22222 223422222211 2223344444444332 2


Q ss_pred             CCccEEEEccCC
Q 018075          250 SGIDVSFDCVGF  261 (361)
Q Consensus       250 ~~~d~vld~~g~  261 (361)
                      +++|+++++.|.
T Consensus        98 g~iD~lv~~Ag~  109 (285)
T 2p91_A           98 GSLDIIVHSIAY  109 (285)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999998873

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=96.16  E-value=0.033  Score=48.05  Aligned_cols=81  Identities=25%  Similarity=0.349  Sum_probs=51.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHc-----CCCE-EeecC-CCccchhHHHHHHHhhc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL-----GADE-TAKVS-TDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l-----g~~~-~~~~~-~~~~~~~~~~~~~~~~~  248 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ +++     +... .+..+ .+.++..+.+.++.+..
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   90 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   90 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            478899998 59999999998888999 688888887765432 222     3221 12111 22233444444443322


Q ss_pred             CCCccEEEEccC
Q 018075          249 GSGIDVSFDCVG  260 (361)
Q Consensus       249 ~~~~d~vld~~g  260 (361)
                       +++|+++++.|
T Consensus        91 -g~id~lv~nAg  101 (267)
T 1iy8_A           91 -GRIDGFFNNAG  101 (267)
T ss_dssp             -SCCSEEEECCC
T ss_pred             -CCCCEEEECCC
Confidence             47999999887

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=96.16  E-value=0.023  Score=48.91  Aligned_cols=83  Identities=16%  Similarity=0.224  Sum_probs=51.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HH---cCCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN---LGADE-TAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ ++   .+... .+..+ .+..+..+.+.++....+.
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   91 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG   91 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            567899998 59999999998888999 688888887654432 22   24321 11111 2222333444443332235


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|+++++.|.
T Consensus        92 ~id~li~~Ag~  102 (266)
T 1xq1_A           92 KLDILINNLGA  102 (266)
T ss_dssp             CCSEEEEECCC
T ss_pred             CCcEEEECCCC
Confidence            79999998874

>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}

Probab=96.15  E-value=0.026  Score=48.13  Aligned_cols=98  Identities=16%  Similarity=0.219  Sum_probs=66.6

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCC-CEEeecCCCccchhHHHHHHHhhcCCCc
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA-DETAKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      ....++.+||-+|||. |..+..+++. |...+++++.+++..+.+++... ..+.....   +...    +. .....|
T Consensus        40 ~~~~~~~~vLD~GcG~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~---d~~~----~~-~~~~~f  109 (253)
T 3g5l_A           40 LPDFNQKTVLDLGCGF-GWHCIYAAEH-GAKKVLGIDLSERMLTEAKRKTTSPVVCYEQK---AIED----IA-IEPDAY  109 (253)
T ss_dssp             CCCCTTCEEEEETCTT-CHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHCCCTTEEEEEC---CGGG----CC-CCTTCE
T ss_pred             hhccCCCEEEEECCCC-CHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhhccCCeEEEEc---chhh----CC-CCCCCe
Confidence            4556899999999876 7777788776 55489999999998888877532 11111111   2111    10 124679


Q ss_pred             cEEEEccC------ChHHHHHHHHhhcCCCEEEEE
Q 018075          253 DVSFDCVG------FDKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       253 d~vld~~g------~~~~~~~~~~~l~~~G~~v~~  281 (361)
                      |+|+....      -...++.+.+.|+|||+++..
T Consensus       110 D~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~  144 (253)
T 3g5l_A          110 NVVLSSLALHYIASFDDICKKVYINLKSSGSFIFS  144 (253)
T ss_dssp             EEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEE
Confidence            99987542      124678889999999999875

>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}

Probab=96.15  E-value=0.03  Score=47.23  Aligned_cols=101  Identities=20%  Similarity=0.275  Sum_probs=67.5

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCc
Q 018075          173 RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       173 ~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      .....++.+||-+|||. |..+..+++. |...+++++.+++..+.+++.....-+.+..  .+....    . .....+
T Consensus        38 ~~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~--~d~~~~----~-~~~~~f  108 (243)
T 3bkw_A           38 MLPEVGGLRIVDLGCGF-GWFCRWAHEH-GASYVLGLDLSEKMLARARAAGPDTGITYER--ADLDKL----H-LPQDSF  108 (243)
T ss_dssp             HSCCCTTCEEEEETCTT-CHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCSSSEEEEE--CCGGGC----C-CCTTCE
T ss_pred             hccccCCCEEEEEcCcC-CHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhcccCCceEEE--cChhhc----c-CCCCCc
Confidence            35567899999999876 7777777776 6557999999999998888765321111111  121110    0 113579


Q ss_pred             cEEEEccCC------hHHHHHHHHhhcCCCEEEEEc
Q 018075          253 DVSFDCVGF------DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       253 d~vld~~g~------~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      |+|+....-      ...++.+.+.|+|||+++...
T Consensus       109 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~  144 (243)
T 3bkw_A          109 DLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFST  144 (243)
T ss_dssp             EEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             eEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEe
Confidence            999875321      246788899999999998753

>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}

Probab=96.15  E-value=0.029  Score=46.59  Aligned_cols=96  Identities=20%  Similarity=0.198  Sum_probs=64.4

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccE
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV  254 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  254 (361)
                      ..+++.+||-+|||. |..+..+++. +. .+++++.+++..+.+++.-...+.....+..++       .  ....+|+
T Consensus        42 ~~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~-------~--~~~~fD~  109 (220)
T 3hnr_A           42 VNKSFGNVLEFGVGT-GNLTNKLLLA-GR-TVYGIEPSREMRMIAKEKLPKEFSITEGDFLSF-------E--VPTSIDT  109 (220)
T ss_dssp             HHTCCSEEEEECCTT-SHHHHHHHHT-TC-EEEEECSCHHHHHHHHHHSCTTCCEESCCSSSC-------C--CCSCCSE
T ss_pred             hccCCCeEEEeCCCC-CHHHHHHHhC-CC-eEEEEeCCHHHHHHHHHhCCCceEEEeCChhhc-------C--CCCCeEE
Confidence            345889999999876 7777777776 77 799999999988888775321111111111111       0  1257999


Q ss_pred             EEEccCC-----h---HHHHHHHHhhcCCCEEEEEc
Q 018075          255 SFDCVGF-----D---KTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       255 vld~~g~-----~---~~~~~~~~~l~~~G~~v~~g  282 (361)
                      |+....-     +   ..+..+.+.|+|||+++...
T Consensus       110 v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  145 (220)
T 3hnr_A          110 IVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFAD  145 (220)
T ss_dssp             EEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             EEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEe
Confidence            9875321     1   16788999999999999874

>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}

Probab=96.15  E-value=0.13  Score=46.18  Aligned_cols=132  Identities=14%  Similarity=0.174  Sum_probs=83.2

Q ss_pred             CEEEEECCCHHHHH-HHHHHHHc-CCCEEEEEeCChhHH-HHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075          180 TNVMIMGSGPIGLV-TLLAARAF-GAPRIIITDVDVQRL-SIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  256 (361)
Q Consensus       180 ~~vlI~G~g~~G~~-ai~la~~~-g~~~vv~v~~~~~~~-~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  256 (361)
                      =++.|+|+|.+|.. .+...+.. +++.+.+++.++++. ++++++|.....      .++.+.+.      ...+|+|+
T Consensus        24 irigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y------~d~~ell~------~~~iDaV~   91 (350)
T 4had_A           24 LRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAF------GSYEEMLA------SDVIDAVY   91 (350)
T ss_dssp             EEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEE------SSHHHHHH------CSSCSEEE
T ss_pred             cEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeee------CCHHHHhc------CCCCCEEE
Confidence            37899999999964 45555544 675455567777764 567788876543      23433332      45799999


Q ss_pred             EccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHh----hhcCcEE-EEeec-CCCcHHHHHHHHHcCCC
Q 018075          257 DCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPA----AAREVDV-IGIFR-YRSTWPLCIEFLRSGKI  324 (361)
Q Consensus       257 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~----~~~~~~i-~~~~~-~~~~~~~~~~~l~~g~~  324 (361)
                      -|+....+.+.+..+|..| +=|++.-+.....-....+    -..++.+ .+... +...++.+-+++++|.+
T Consensus        92 I~tP~~~H~~~~~~al~aG-khVl~EKPla~~~~ea~~l~~~a~~~~~~l~v~~~~R~~p~~~~~k~~i~~G~i  164 (350)
T 4had_A           92 IPLPTSQHIEWSIKAADAG-KHVVCEKPLALKAGDIDAVIAARDRNKVVVTEAYMITYSPVWQKVRSLIDEGAI  164 (350)
T ss_dssp             ECSCGGGHHHHHHHHHHTT-CEEEECSCCCSSGGGGHHHHHHHHHHTCCEEECCGGGGSHHHHHHHHHHHTTTT
T ss_pred             EeCCCchhHHHHHHHHhcC-CEEEEeCCcccchhhHHHHHHHHHHcCCceeEeeeeecCHHHHHhhHhhhcCCC
Confidence            9999888899999999875 4456664332211112111    1223333 33322 25678889999999987

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=96.14  E-value=0.069  Score=41.69  Aligned_cols=96  Identities=13%  Similarity=0.107  Sum_probs=59.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC-hhHHHHHHH-c--CCCEEeecCCCccchhHHHHHHHhhcCCCcc
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD-VQRLSIARN-L--GADETAKVSTDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~-~~~~~~~~~-l--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      ...+++|.|+|.+|...++.+...|. .|++++.+ +++.+.+++ +  |... +.-+.  .+. +.+.   ..+-.++|
T Consensus         2 ~~~~vlI~G~G~vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~~~~~~~-i~gd~--~~~-~~l~---~a~i~~ad   73 (153)
T 1id1_A            2 RKDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGDNADV-IPGDS--NDS-SVLK---KAGIDRCR   73 (153)
T ss_dssp             CCSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCTTCEE-EESCT--TSH-HHHH---HHTTTTCS
T ss_pred             CCCcEEEECCCHHHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhhcCCCeE-EEcCC--CCH-HHHH---HcChhhCC
Confidence            35689999999999999999998998 57888886 465544433 2  3332 22111  121 2222   22346899


Q ss_pred             EEEEccCChHH---HHHHHHhhcCCCEEEEE
Q 018075          254 VSFDCVGFDKT---MSTALNATRPGGKVCLI  281 (361)
Q Consensus       254 ~vld~~g~~~~---~~~~~~~l~~~G~~v~~  281 (361)
                      +|+-+++.+..   .....+.+.+..+++..
T Consensus        74 ~vi~~~~~d~~n~~~~~~a~~~~~~~~ii~~  104 (153)
T 1id1_A           74 AILALSDNDADNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             EEEECSSCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred             EEEEecCChHHHHHHHHHHHHHCCCCEEEEE
Confidence            99999987632   22234555566676653

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=96.14  E-value=0.025  Score=47.96  Aligned_cols=79  Identities=20%  Similarity=0.207  Sum_probs=50.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      ++.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ +++.....+..+-  .+.. .+.++.+ .-.++|++
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~--~~~~-~~~~~~~-~~~~id~v   80 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDL--GDWE-ATERALG-SVGPVDLL   80 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCT--TCHH-HHHHHHT-TCCCCCEE
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCCCEEEEeC--CCHH-HHHHHHH-HcCCCCEE
Confidence            578999998 59999999998888999 678888887765543 3343222222221  2222 2222222 12469999


Q ss_pred             EEccCC
Q 018075          256 FDCVGF  261 (361)
Q Consensus       256 ld~~g~  261 (361)
                      |++.|.
T Consensus        81 i~~Ag~   86 (244)
T 3d3w_A           81 VNNAAV   86 (244)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999873

>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A

Probab=96.13  E-value=0.013  Score=48.21  Aligned_cols=97  Identities=20%  Similarity=0.327  Sum_probs=63.4

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc----CCCEEeecCCCccchhHHHHHHHhhcCCC
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (361)
                      ++++ +||-+|||. |..+..+++. |. .+++++.+++..+.+++.    +....+. ..+..+..     +   ....
T Consensus        28 ~~~~-~vLdiGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~-~~d~~~~~-----~---~~~~   94 (202)
T 2kw5_A           28 IPQG-KILCLAEGE-GRNACFLASL-GY-EVTAVDQSSVGLAKAKQLAQEKGVKITTV-QSNLADFD-----I---VADA   94 (202)
T ss_dssp             SCSS-EEEECCCSC-THHHHHHHTT-TC-EEEEECSSHHHHHHHHHHHHHHTCCEEEE-CCBTTTBS-----C---CTTT
T ss_pred             CCCC-CEEEECCCC-CHhHHHHHhC-CC-eEEEEECCHHHHHHHHHHHHhcCCceEEE-EcChhhcC-----C---CcCC
Confidence            4677 999999876 7777777775 77 799999999887777654    3221111 11111110     1   1357


Q ss_pred             ccEEEEccCC------hHHHHHHHHhhcCCCEEEEEccCC
Q 018075          252 IDVSFDCVGF------DKTMSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       252 ~d~vld~~g~------~~~~~~~~~~l~~~G~~v~~g~~~  285 (361)
                      +|+|+.+...      ...+..+.+.|+|||+++......
T Consensus        95 fD~v~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~  134 (202)
T 2kw5_A           95 WEGIVSIFCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAP  134 (202)
T ss_dssp             CSEEEEECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECT
T ss_pred             ccEEEEEhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence            9999975321      235777888999999999875443

>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}

Probab=96.13  E-value=0.013  Score=51.90  Aligned_cols=95  Identities=14%  Similarity=0.140  Sum_probs=64.4

Q ss_pred             CEEEEECCCHHHHHHHHHHHHc-CCCEEEEEeCChhHHHHHHHc-CCC---EEeecCCCccchhHHHHHHHhhcCCCccE
Q 018075          180 TNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARNL-GAD---ETAKVSTDIEDVDTDVGKIQNAMGSGIDV  254 (361)
Q Consensus       180 ~~vlI~G~g~~G~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~l-g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  254 (361)
                      .+||++|+|. |..+..+++.. +. .+++++.+++-.+.+++. +..   .+..+.   .+..+.+...   ....||+
T Consensus        91 ~rVLdIG~G~-G~la~~la~~~p~~-~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~---~Da~~~l~~~---~~~~fDv  162 (317)
T 3gjy_A           91 LRITHLGGGA-CTMARYFADVYPQS-RNTVVELDAELARLSREWFDIPRAPRVKIRV---DDARMVAESF---TPASRDV  162 (317)
T ss_dssp             CEEEEESCGG-GHHHHHHHHHSTTC-EEEEEESCHHHHHHHHHHSCCCCTTTEEEEE---SCHHHHHHTC---CTTCEEE
T ss_pred             CEEEEEECCc-CHHHHHHHHHCCCc-EEEEEECCHHHHHHHHHhccccCCCceEEEE---CcHHHHHhhc---cCCCCCE
Confidence            4999999876 77888888865 56 799999999999988873 321   111111   2333333221   2467999


Q ss_pred             EEEccC----------ChHHHHHHHHhhcCCCEEEEEc
Q 018075          255 SFDCVG----------FDKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       255 vld~~g----------~~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ||-...          ..+.++.+.+.|+++|.++.-.
T Consensus       163 Ii~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~  200 (317)
T 3gjy_A          163 IIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANC  200 (317)
T ss_dssp             EEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEe
Confidence            987432          1346888999999999998654

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=96.13  E-value=0.1  Score=45.22  Aligned_cols=82  Identities=24%  Similarity=0.385  Sum_probs=51.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCC------------hhHH----HHHHHcCCCE-EeecC-CCccchh
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVD------------VQRL----SIARNLGADE-TAKVS-TDIEDVD  238 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~------------~~~~----~~~~~lg~~~-~~~~~-~~~~~~~  238 (361)
                      .|.++||.| +|++|.+.++.+...|+ .|+.++++            .++.    +.+++.+... .+..+ .+..+..
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   87 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGA-DIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALE   87 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            578999998 69999999999989999 57777775            3222    2233344332 11111 2233444


Q ss_pred             HHHHHHHhhcCCCccEEEEccCC
Q 018075          239 TDVGKIQNAMGSGIDVSFDCVGF  261 (361)
Q Consensus       239 ~~~~~~~~~~~~~~d~vld~~g~  261 (361)
                      +.+.++.+.. +++|+++++.|.
T Consensus        88 ~~~~~~~~~~-g~id~lv~nAg~  109 (281)
T 3s55_A           88 SFVAEAEDTL-GGIDIAITNAGI  109 (281)
T ss_dssp             HHHHHHHHHH-TCCCEEEECCCC
T ss_pred             HHHHHHHHhc-CCCCEEEECCCC
Confidence            4444443322 479999998874

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=96.12  E-value=0.093  Score=43.98  Aligned_cols=77  Identities=18%  Similarity=0.166  Sum_probs=48.1

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcCCCE-EeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          181 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADE-TAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       181 ~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      ++||.| +|++|.+.+..+...|+ .|+.+++++++.+.+ ++++... .+..  +..+. +.++++.+.....+|++++
T Consensus         3 ~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~--D~~~~-~~v~~~~~~~~~~~d~lv~   78 (230)
T 3guy_A            3 LIVITGASSGLGAELAKLYDAEGK-ATYLTGRSESKLSTVTNCLSNNVGYRAR--DLASH-QEVEQLFEQLDSIPSTVVH   78 (230)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTCSSCCCEEEC--CTTCH-HHHHHHHHSCSSCCSEEEE
T ss_pred             EEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhccCeEee--cCCCH-HHHHHHHHHHhhcCCEEEE
Confidence            689998 59999999998888999 478888888776554 3443221 1111  11222 2233333222345699999


Q ss_pred             ccCC
Q 018075          258 CVGF  261 (361)
Q Consensus       258 ~~g~  261 (361)
                      +.|.
T Consensus        79 ~Ag~   82 (230)
T 3guy_A           79 SAGS   82 (230)
T ss_dssp             CCCC
T ss_pred             eCCc
Confidence            8873

>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*

Probab=96.12  E-value=0.043  Score=45.90  Aligned_cols=98  Identities=10%  Similarity=0.042  Sum_probs=65.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhhcCCCcc
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      ++.+||=+|||. |..++.+|+...-..|++++.+++..+.+++    .+...+....   .+..+.+...  .....+|
T Consensus        34 ~~~~vLDiGcG~-G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~---~Da~~~l~~~--~~~~~~d  107 (218)
T 3dxy_A           34 EAPVTLEIGFGM-GASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMC---HDAVEVLHKM--IPDNSLR  107 (218)
T ss_dssp             CCCEEEEESCTT-CHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEEC---SCHHHHHHHH--SCTTCEE
T ss_pred             CCCeEEEEeeeC-hHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEE---CCHHHHHHHH--cCCCChh
Confidence            677888899877 8888899988754479999999987665543    4554432222   2333322221  1245789


Q ss_pred             EEEEccCCh--------------HHHHHHHHhhcCCCEEEEE
Q 018075          254 VSFDCVGFD--------------KTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       254 ~vld~~g~~--------------~~~~~~~~~l~~~G~~v~~  281 (361)
                      .|+-....+              ..++.+.+.|+|||.+++.
T Consensus       108 ~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~  149 (218)
T 3dxy_A          108 MVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMA  149 (218)
T ss_dssp             EEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEE
T ss_pred             eEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEE
Confidence            887653222              3788899999999998875

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.11  E-value=0.022  Score=49.56  Aligned_cols=81  Identities=25%  Similarity=0.331  Sum_probs=51.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHc---CC---C-EEeecC-CCccchhHHHHHHHhh
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---GA---D-ETAKVS-TDIEDVDTDVGKIQNA  247 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~---~-~~~~~~-~~~~~~~~~~~~~~~~  247 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ +++   +.   . ..+..+ .+..+..+.+.++.+.
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   83 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence            467899998 69999999998888999 688888887765433 222   22   1 112111 2223333444444332


Q ss_pred             cCCCccEEEEccC
Q 018075          248 MGSGIDVSFDCVG  260 (361)
Q Consensus       248 ~~~~~d~vld~~g  260 (361)
                      . +++|+++++.|
T Consensus        84 ~-g~iD~lv~nAg   95 (280)
T 1xkq_A           84 F-GKIDVLVNNAG   95 (280)
T ss_dssp             H-SCCCEEEECCC
T ss_pred             c-CCCCEEEECCC
Confidence            2 47999999887

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=96.10  E-value=0.011  Score=50.25  Aligned_cols=78  Identities=22%  Similarity=0.296  Sum_probs=47.9

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecC-CCccchhHHHHHHHhhcC-CCcc
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS-TDIEDVDTDVGKIQNAMG-SGID  253 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~d  253 (361)
                      ..+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+     +....+..+ .+..+..+.+.++.+..+ +++|
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD   78 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEA-----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVD   78 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTS-----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCChhhcc-----CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCC
Confidence            4578899998 59999999998888999 6777777765432     111111111 112233333333333222 5799


Q ss_pred             EEEEccC
Q 018075          254 VSFDCVG  260 (361)
Q Consensus       254 ~vld~~g  260 (361)
                      +++++.|
T Consensus        79 ~lv~~Ag   85 (241)
T 1dhr_A           79 AILCVAG   85 (241)
T ss_dssp             EEEECCC
T ss_pred             EEEEccc
Confidence            9999987

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=96.10  E-value=0.029  Score=48.92  Aligned_cols=82  Identities=20%  Similarity=0.240  Sum_probs=54.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcCCCEE-eecC-CCccchhHHHHHHHhhcCCCcc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADET-AKVS-TDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      .|.++||.| ++++|.+.++.+...|+ .|+.++++.++.+.+ ++++.... +..+ .+..+..+.+.++.+.. +++|
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD   81 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGA-RVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAF-GKID   81 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhc-CCCC
Confidence            478899998 59999999998888999 688888888776544 44443321 1111 22234444444443322 4799


Q ss_pred             EEEEccCC
Q 018075          254 VSFDCVGF  261 (361)
Q Consensus       254 ~vld~~g~  261 (361)
                      +++++.|.
T Consensus        82 ~lvnnAg~   89 (281)
T 3zv4_A           82 TLIPNAGI   89 (281)
T ss_dssp             EEECCCCC
T ss_pred             EEEECCCc
Confidence            99999874

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=96.10  E-value=0.038  Score=47.80  Aligned_cols=82  Identities=21%  Similarity=0.335  Sum_probs=52.1

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH----HHcCCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      .+.++||.| +|++|.+.+..+...|+ .|+.+++++++.+.+    ++.+... .+..+ .+..+..+.+.++.+. -+
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~-~g  107 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE-IG  107 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-TC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHH-CC
Confidence            568999998 59999999998888999 688888887665432    2224321 22211 2223333444443322 24


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|+++++.|.
T Consensus       108 ~iD~li~~Ag~  118 (272)
T 1yb1_A          108 DVSILVNNAGV  118 (272)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCcEEEECCCc
Confidence            79999999874

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=96.09  E-value=0.027  Score=48.35  Aligned_cols=82  Identities=17%  Similarity=0.249  Sum_probs=52.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH----HHcCCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      .|.++||.| +|++|.+.++.+...|+ .|+.++++.++.+.+    ++.+... .+..+ .+..+..+.+.++.+.. +
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g   88 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQF-G   88 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-C
Confidence            578899998 59999999998888899 688888887765433    2234322 12111 22233444444443322 4


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|+++++.|.
T Consensus        89 ~id~lv~nAg~   99 (256)
T 3gaf_A           89 KITVLVNNAGG   99 (256)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999998874

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=96.09  E-value=0.058  Score=46.11  Aligned_cols=80  Identities=15%  Similarity=0.296  Sum_probs=49.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH---cCCCEE-eecC-CCccchhHHHHHHHhhcCCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN---LGADET-AKVS-TDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~---lg~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~  251 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.++++++ .+.+++   .+.... +..+ .+..+..+.+.++.+.. ++
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~-~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~   79 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGA-NIVLNGFGDP-APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREF-GG   79 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEECSSCC-HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHH-SS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCch-HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHc-CC
Confidence            467899998 59999999998888999 6777777654 223333   343221 1111 22233344444333222 47


Q ss_pred             ccEEEEccC
Q 018075          252 IDVSFDCVG  260 (361)
Q Consensus       252 ~d~vld~~g  260 (361)
                      +|+++++.|
T Consensus        80 id~lv~~Ag   88 (255)
T 2q2v_A           80 VDILVNNAG   88 (255)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999987

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=96.08  E-value=0.032  Score=48.31  Aligned_cols=82  Identities=22%  Similarity=0.297  Sum_probs=53.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCCE-EeecC-CCccchhHHHHHHHhhcCCCcc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      .|.++||.| +|++|.+.++.+...|+ .|+.+++++++.+ .+++++... .+..+ .+..+..+.+.++.+.. +++|
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id   87 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGA-RVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTF-GRLD   87 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHc-CCCC
Confidence            578999998 59999999998888999 6777888776544 445555322 11111 22334444444443322 4799


Q ss_pred             EEEEccCC
Q 018075          254 VSFDCVGF  261 (361)
Q Consensus       254 ~vld~~g~  261 (361)
                      +++++.|.
T Consensus        88 ~lv~nAg~   95 (271)
T 3tzq_B           88 IVDNNAAH   95 (271)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99998874

>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}

Probab=96.07  E-value=0.013  Score=48.72  Aligned_cols=106  Identities=14%  Similarity=0.239  Sum_probs=69.9

Q ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHHHc----CCCEEeecCCCccchhHHHHHH
Q 018075          170 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKI  244 (361)
Q Consensus       170 ~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~  244 (361)
                      .+....++++.+||-+|||. |..+..+++..+ ...+++++.+++..+.+++.    +...+.....+..+..      
T Consensus        29 ~~~~~~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~------  101 (219)
T 3dh0_A           29 VLKEFGLKEGMTVLDVGTGA-GFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIP------  101 (219)
T ss_dssp             HHHHHTCCTTCEEEESSCTT-CTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCS------
T ss_pred             HHHHhCCCCCCEEEEEecCC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCC------
Confidence            34556788999999999876 777888888762 22799999999877766553    3222111111111110      


Q ss_pred             HhhcCCCccEEEEccCC------hHHHHHHHHhhcCCCEEEEEccC
Q 018075          245 QNAMGSGIDVSFDCVGF------DKTMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       245 ~~~~~~~~d~vld~~g~------~~~~~~~~~~l~~~G~~v~~g~~  284 (361)
                        .....+|+|+....-      ...++.+.+.|+|||+++.....
T Consensus       102 --~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~  145 (219)
T 3dh0_A          102 --LPDNTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWK  145 (219)
T ss_dssp             --SCSSCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred             --CCCCCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEec
Confidence              123579999874331      24788899999999999987643

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.07  E-value=0.016  Score=49.17  Aligned_cols=82  Identities=22%  Similarity=0.308  Sum_probs=52.5

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcC--CCEEEEEeCChhHHHHHHHc-CCC-EEeecC-CCccchhHHHHHHHhhcC-CC
Q 018075          179 ETNVMIMG-SGPIGLVTLLAARAFG--APRIIITDVDVQRLSIARNL-GAD-ETAKVS-TDIEDVDTDVGKIQNAMG-SG  251 (361)
Q Consensus       179 g~~vlI~G-~g~~G~~ai~la~~~g--~~~vv~v~~~~~~~~~~~~l-g~~-~~~~~~-~~~~~~~~~~~~~~~~~~-~~  251 (361)
                      +.++||.| +|++|.+.++.+...|  . .|+.++++.++.+.++++ +.. ..+..+ .+..+..+.+.++.+..+ .+
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~g~~~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~   81 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVKDKNIR-HIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG   81 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCC-EEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred             CCEEEEecCCchHHHHHHHHHHhcCCCc-EEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence            57899998 5999999999888889  6 788888888776666655 222 112211 122233344443332222 27


Q ss_pred             ccEEEEccCC
Q 018075          252 IDVSFDCVGF  261 (361)
Q Consensus       252 ~d~vld~~g~  261 (361)
                      +|++|++.|.
T Consensus        82 id~li~~Ag~   91 (250)
T 1yo6_A           82 LSLLINNAGV   91 (250)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECCcc
Confidence            9999998863

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=96.07  E-value=0.036  Score=48.25  Aligned_cols=83  Identities=20%  Similarity=0.267  Sum_probs=51.5

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HH---cCCCE-EeecC-CCccchhHHHHHHHhhcC
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN---LGADE-TAKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      ..+.++||.| +|++|.+.+..+...|+ .|+.++++.++.+.+ ++   .+... .+..+ .+..+..+.+.++.+.. 
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-   99 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGI-AVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERF-   99 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            3578999998 59999999998888999 688888887765432 22   24322 11111 22233444444443322 


Q ss_pred             CCccEEEEccCC
Q 018075          250 SGIDVSFDCVGF  261 (361)
Q Consensus       250 ~~~d~vld~~g~  261 (361)
                      +++|+++++.|.
T Consensus       100 g~id~lv~nAg~  111 (279)
T 3sju_A          100 GPIGILVNSAGR  111 (279)
T ss_dssp             CSCCEEEECCCC
T ss_pred             CCCcEEEECCCC
Confidence            479999999874

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=96.07  E-value=0.025  Score=50.68  Aligned_cols=90  Identities=16%  Similarity=0.191  Sum_probs=66.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      .|.+|.|+|.|.+|...++.++.+|. .|++.+++.++ +.+.++|+..        .++.    ++    -...|+|+.
T Consensus       164 ~g~tvgIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~--------~~l~----el----l~~aDvV~l  225 (335)
T 2g76_A          164 NGKTLGILGLGRIGREVATRMQSFGM-KTIGYDPIISP-EVSASFGVQQ--------LPLE----EI----WPLCDFITV  225 (335)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSSCH-HHHHHTTCEE--------CCHH----HH----GGGCSEEEE
T ss_pred             CcCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCCcch-hhhhhcCcee--------CCHH----HH----HhcCCEEEE
Confidence            57899999999999999999999999 68888887665 3566777642        1222    22    136899999


Q ss_pred             ccCChHH----H-HHHHHhhcCCCEEEEEccCC
Q 018075          258 CVGFDKT----M-STALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       258 ~~g~~~~----~-~~~~~~l~~~G~~v~~g~~~  285 (361)
                      ++.....    + ...+..|++++.++.++...
T Consensus       226 ~~P~t~~t~~li~~~~l~~mk~gailIN~arg~  258 (335)
T 2g76_A          226 HTPLLPSTTGLLNDNTFAQCKKGVRVVNCARGG  258 (335)
T ss_dssp             CCCCCTTTTTSBCHHHHTTSCTTEEEEECSCTT
T ss_pred             ecCCCHHHHHhhCHHHHhhCCCCcEEEECCCcc
Confidence            8775421    1 46788899999888887644

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.06  E-value=0.098  Score=46.05  Aligned_cols=88  Identities=19%  Similarity=0.154  Sum_probs=62.4

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEcc
Q 018075          180 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV  259 (361)
Q Consensus       180 ~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  259 (361)
                      .+|.|+|+|.+|...+..+...|. .|++.++++++.+.+.+.|.....   .   +..+.        -...|+||-++
T Consensus         8 ~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~~---~---~~~e~--------~~~aDvvi~~v   72 (303)
T 3g0o_A            8 FHVGIVGLGSMGMGAARSCLRAGL-STWGADLNPQACANLLAEGACGAA---A---SAREF--------AGVVDALVILV   72 (303)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEE---S---SSTTT--------TTTCSEEEECC
T ss_pred             CeEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCCcccc---C---CHHHH--------HhcCCEEEEEC
Confidence            579999999999999998888898 688889999999888887765411   1   11111        13578888888


Q ss_pred             CChHHHHHHH-------HhhcCCCEEEEEc
Q 018075          260 GFDKTMSTAL-------NATRPGGKVCLIG  282 (361)
Q Consensus       260 g~~~~~~~~~-------~~l~~~G~~v~~g  282 (361)
                      ..+...+..+       ..++++..++..+
T Consensus        73 p~~~~~~~v~~~~~~l~~~l~~g~ivv~~s  102 (303)
T 3g0o_A           73 VNAAQVRQVLFGEDGVAHLMKPGSAVMVSS  102 (303)
T ss_dssp             SSHHHHHHHHC--CCCGGGSCTTCEEEECS
T ss_pred             CCHHHHHHHHhChhhHHhhCCCCCEEEecC
Confidence            8764555554       4456666666554

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=96.06  E-value=0.03  Score=47.79  Aligned_cols=82  Identities=21%  Similarity=0.332  Sum_probs=54.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCCEE-eecC-CCccchhHHHHHHHhhcCCCcc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADET-AKVS-TDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      .|.++||.| +|++|.+.++.+...|+ .|+.++++.++.+ .+++++.... +..+ .+..+..+.+.++.+.. +++|
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id   82 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGA-TVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALT-GGID   82 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHH-SCCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHC-CCCC
Confidence            578999998 59999999999989999 6888888887654 3445554322 1111 22233444444443322 4799


Q ss_pred             EEEEccCC
Q 018075          254 VSFDCVGF  261 (361)
Q Consensus       254 ~vld~~g~  261 (361)
                      +++++.|.
T Consensus        83 ~lv~nAg~   90 (247)
T 3rwb_A           83 ILVNNASI   90 (247)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999884

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=96.06  E-value=0.069  Score=45.99  Aligned_cols=76  Identities=20%  Similarity=0.245  Sum_probs=48.1

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEE-eecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++     .-.+..+ .++ .+..+..+.+.++.+.. +++|++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~-----~~~~~~~~~Dl-~~~~~v~~~~~~~~~~~-g~iD~l   78 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGS-KVIDLSIHDPG-----EAKYDHIECDV-TNPDQVKASIDHIFKEY-GSISVL   78 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSCCC-----SCSSEEEECCT-TCHHHHHHHHHHHHHHH-SCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEecCccc-----CCceEEEEecC-CCHHHHHHHHHHHHHHc-CCCCEE
Confidence            467899998 59999999998888999 67777776554     1112111 122 22233444444443322 479999


Q ss_pred             EEccCC
Q 018075          256 FDCVGF  261 (361)
Q Consensus       256 ld~~g~  261 (361)
                      +++.|.
T Consensus        79 v~~Ag~   84 (264)
T 2dtx_A           79 VNNAGI   84 (264)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999873

>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*

Probab=96.05  E-value=0.061  Score=47.48  Aligned_cols=100  Identities=18%  Similarity=0.129  Sum_probs=66.5

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcC--------CCEEeecCCCccchhHHHHHHHhh
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG--------ADETAKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg--------~~~~~~~~~~~~~~~~~~~~~~~~  247 (361)
                      ..++.+||++|+|. |..+..+++..+...+++++.+++..+.+++.-        ...+....   .+..+.+..   .
T Consensus        93 ~~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~---~D~~~~~~~---~  165 (304)
T 3bwc_A           93 HPKPERVLIIGGGD-GGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRV---GDGLAFVRQ---T  165 (304)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE---SCHHHHHHS---S
T ss_pred             CCCCCeEEEEcCCC-CHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEE---CcHHHHHHh---c
Confidence            46778999999876 777778887665558999999998888777632        11111111   233322211   0


Q ss_pred             cCCCccEEEEccCC----------hHHHHHHHHhhcCCCEEEEEc
Q 018075          248 MGSGIDVSFDCVGF----------DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       248 ~~~~~d~vld~~g~----------~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ....||+|+.....          ...++.+.+.|+|+|.++...
T Consensus       166 ~~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  210 (304)
T 3bwc_A          166 PDNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQG  210 (304)
T ss_dssp             CTTCEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cCCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence            24679999864421          246788899999999998864

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=96.05  E-value=0.04  Score=47.38  Aligned_cols=82  Identities=17%  Similarity=0.235  Sum_probs=52.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcCCC-EEeecC-CCccchhHHHHHHHhhcCCCcc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGAD-ETAKVS-TDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.++++.++.+.+ ++++.. ..+..+ .+..+..+.+.++.+.. +++|
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~iD   83 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAF-GGLH   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHc-CCCC
Confidence            468899998 59999999998888999 688888887765443 344321 111111 22233444444433322 3799


Q ss_pred             EEEEccCC
Q 018075          254 VSFDCVGF  261 (361)
Q Consensus       254 ~vld~~g~  261 (361)
                      +++++.|.
T Consensus        84 ~lv~~Ag~   91 (260)
T 1nff_A           84 VLVNNAGI   91 (260)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99998873

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=96.05  E-value=0.041  Score=46.90  Aligned_cols=82  Identities=23%  Similarity=0.268  Sum_probs=52.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCh-hHHH-HHHHcCCCE-EeecC-CCccchhHHHHHHHhhcCCCc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDV-QRLS-IARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~-~~~~-~~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      ++.++||.| +|++|.+.++.+...|+ .|+.+++++ ++.+ .+++.+... .+..+ .+..+..+.+.++.+.. +++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i   83 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTF-GRC   83 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHc-CCC
Confidence            467899998 59999999998888999 677777776 5443 344555332 12111 22233444444433222 479


Q ss_pred             cEEEEccCC
Q 018075          253 DVSFDCVGF  261 (361)
Q Consensus       253 d~vld~~g~  261 (361)
                      |+++++.|.
T Consensus        84 d~lv~nAg~   92 (249)
T 2ew8_A           84 DILVNNAGI   92 (249)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999998873

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=96.03  E-value=0.035  Score=48.38  Aligned_cols=79  Identities=13%  Similarity=0.164  Sum_probs=54.3

Q ss_pred             HHHHhcCC-CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCC---EEeecCCCccchhHHHHH
Q 018075          169 HACRRANV-GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGAD---ETAKVSTDIEDVDTDVGK  243 (361)
Q Consensus       169 ~~l~~~~~-~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~---~~~~~~~~~~~~~~~~~~  243 (361)
                      .+++...+ -.+.+++|+|+|++|.+++..+...|+..|.+++++.++.+ ++++++..   ....       +.+    
T Consensus       115 ~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~-------~~~----  183 (281)
T 3o8q_A          115 QDLLAQQVLLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQA-------FEQ----  183 (281)
T ss_dssp             HHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEE-------GGG----
T ss_pred             HHHHHhCCCccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEee-------HHH----
Confidence            34554333 36889999999999999999888899867888888887754 55555531   1111       111    


Q ss_pred             HHhhcCCCccEEEEccCCh
Q 018075          244 IQNAMGSGIDVSFDCVGFD  262 (361)
Q Consensus       244 ~~~~~~~~~d~vld~~g~~  262 (361)
                      +    ..++|+|+++++..
T Consensus       184 l----~~~aDiIInaTp~g  198 (281)
T 3o8q_A          184 L----KQSYDVIINSTSAS  198 (281)
T ss_dssp             C----CSCEEEEEECSCCC
T ss_pred             h----cCCCCEEEEcCcCC
Confidence            1    25799999998754

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.03  E-value=0.05  Score=46.40  Aligned_cols=74  Identities=18%  Similarity=0.168  Sum_probs=49.0

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      ..+.++||.| +|++|.+.++.+...|+ .|+.++++++.   +++++....+ .+- ..+......++     .++|++
T Consensus        17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~---~~~~~~~~~~-~D~-~~~~~~~~~~~-----~~iD~l   85 (249)
T 1o5i_A           17 IRDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEEL---LKRSGHRYVV-CDL-RKDLDLLFEKV-----KEVDIL   85 (249)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHH---HHHTCSEEEE-CCT-TTCHHHHHHHS-----CCCSEE
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHH---HHhhCCeEEE-eeH-HHHHHHHHHHh-----cCCCEE
Confidence            4678999998 59999999998888999 68888887643   3445522221 111 22333333322     279999


Q ss_pred             EEccCC
Q 018075          256 FDCVGF  261 (361)
Q Consensus       256 ld~~g~  261 (361)
                      +++.|.
T Consensus        86 v~~Ag~   91 (249)
T 1o5i_A           86 VLNAGG   91 (249)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999873

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=96.02  E-value=0.079  Score=45.26  Aligned_cols=81  Identities=14%  Similarity=0.054  Sum_probs=50.2

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcC--CCEEEEEeCChhHHHHH-HHcCCCE-EeecC-CCccchhHHHHHHHhhcCCCc
Q 018075          179 ETNVMIMG-SGPIGLVTLLAARAFG--APRIIITDVDVQRLSIA-RNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       179 g~~vlI~G-~g~~G~~ai~la~~~g--~~~vv~v~~~~~~~~~~-~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      |.++||.| ++++|.+.++.+...|  + .|+.+++++++.+.+ ++++... .+..+ .+..+..+.+.++.+.. +++
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~i   79 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDT-VVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGH-GKI   79 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSC-EEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHH-SCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCe-EEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhc-CCc
Confidence            56889998 5899998887666564  5 677788888766544 3444322 11111 22334444444443322 479


Q ss_pred             cEEEEccCC
Q 018075          253 DVSFDCVGF  261 (361)
Q Consensus       253 d~vld~~g~  261 (361)
                      |+++++.|.
T Consensus        80 d~lvnnAg~   88 (254)
T 3kzv_A           80 DSLVANAGV   88 (254)
T ss_dssp             CEEEEECCC
T ss_pred             cEEEECCcc
Confidence            999998874

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=96.02  E-value=0.093  Score=45.42  Aligned_cols=83  Identities=18%  Similarity=0.256  Sum_probs=51.3

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCC------------hhHHH----HHHHcCCCEE-eecC-CCccch
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVD------------VQRLS----IARNLGADET-AKVS-TDIEDV  237 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~------------~~~~~----~~~~lg~~~~-~~~~-~~~~~~  237 (361)
                      -.|.++||.| +|++|.+.++.+...|+ .|+.++++            .++.+    .+++.+.... +..+ .+..+.
T Consensus        11 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   89 (278)
T 3sx2_A           11 LTGKVAFITGAARGQGRAHAVRLAADGA-DIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESL   89 (278)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence            3578999998 59999999998888999 57777765            33332    2233343321 1111 223334


Q ss_pred             hHHHHHHHhhcCCCccEEEEccCC
Q 018075          238 DTDVGKIQNAMGSGIDVSFDCVGF  261 (361)
Q Consensus       238 ~~~~~~~~~~~~~~~d~vld~~g~  261 (361)
                      .+.+.++.+.. +++|+++++.|.
T Consensus        90 ~~~~~~~~~~~-g~id~lv~nAg~  112 (278)
T 3sx2_A           90 SAALQAGLDEL-GRLDIVVANAGI  112 (278)
T ss_dssp             HHHHHHHHHHH-CCCCEEEECCCC
T ss_pred             HHHHHHHHHHc-CCCCEEEECCCC
Confidence            44444443322 479999999874

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=96.01  E-value=0.057  Score=46.65  Aligned_cols=80  Identities=25%  Similarity=0.347  Sum_probs=50.7

Q ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEE-eecCCCccchhHHHHHHHhhcCCCc
Q 018075          175 NVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       175 ~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      .-.+|+++||.| +|++|.+.++.+...|+ .|+.+++++++..   . ....+ .++ .+..+..+.+.++.+.. +++
T Consensus        10 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~---~-~~~~~~~Dv-~~~~~v~~~~~~~~~~~-g~i   82 (269)
T 3vtz_A           10 EEFTDKVAIVTGGSSGIGLAVVDALVRYGA-KVVSVSLDEKSDV---N-VSDHFKIDV-TNEEEVKEAVEKTTKKY-GRI   82 (269)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCC--CT---T-SSEEEECCT-TCHHHHHHHHHHHHHHH-SCC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhcc---C-ceeEEEecC-CCHHHHHHHHHHHHHHc-CCC
Confidence            345789999998 58999999998888999 6788877765431   1 11111 222 22334444444443322 479


Q ss_pred             cEEEEccCC
Q 018075          253 DVSFDCVGF  261 (361)
Q Consensus       253 d~vld~~g~  261 (361)
                      |+++++.|.
T Consensus        83 D~lv~nAg~   91 (269)
T 3vtz_A           83 DILVNNAGI   91 (269)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999999874

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=96.01  E-value=0.048  Score=47.26  Aligned_cols=81  Identities=15%  Similarity=0.224  Sum_probs=49.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc---CCCE-EeecC-CCccchhHHHHHHHhhcCCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL---GADE-TAKVS-TDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l---g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~  251 (361)
                      .|.++||.| +|++|.+.++.+...|+ .|+.+++++...+.++++   +... .+..+ .+..+..+....+.+  .++
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~--~g~  106 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGA-HVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAA--TRR  106 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHH--HSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHh--cCC
Confidence            578999998 59999999998888999 577777766555555443   3221 11111 122222222222222  247


Q ss_pred             ccEEEEccCC
Q 018075          252 IDVSFDCVGF  261 (361)
Q Consensus       252 ~d~vld~~g~  261 (361)
                      +|+++++.|.
T Consensus       107 iD~lv~nAg~  116 (273)
T 3uf0_A          107 VDVLVNNAGI  116 (273)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECCCC
Confidence            9999998874

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.01  E-value=0.026  Score=49.68  Aligned_cols=81  Identities=22%  Similarity=0.310  Sum_probs=51.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HH---cCC---C-EEeecC-CCccchhHHHHHHHhh
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN---LGA---D-ETAKVS-TDIEDVDTDVGKIQNA  247 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~---~-~~~~~~-~~~~~~~~~~~~~~~~  247 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ ++   .+.   . ..+..+ .+..+..+.+.++.+.
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  103 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK  103 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence            567899998 69999999998888999 688888887765432 22   232   1 112111 2223344444443332


Q ss_pred             cCCCccEEEEccC
Q 018075          248 MGSGIDVSFDCVG  260 (361)
Q Consensus       248 ~~~~~d~vld~~g  260 (361)
                      . +++|+++++.|
T Consensus       104 ~-g~iD~lvnnAG  115 (297)
T 1xhl_A          104 F-GKIDILVNNAG  115 (297)
T ss_dssp             H-SCCCEEEECCC
T ss_pred             c-CCCCEEEECCC
Confidence            2 47999999887

>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}

Probab=96.01  E-value=0.011  Score=49.95  Aligned_cols=101  Identities=10%  Similarity=0.054  Sum_probs=65.9

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCC-EEeecCCCccchhHHHH-HHHhh
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGAD-ETAKVSTDIEDVDTDVG-KIQNA  247 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~~~-~~~~~  247 (361)
                      ....++.+||-+|+|. |..++.+++......|++++.+++..+.+++    .+.. .+....   .+..+.+. .+   
T Consensus        67 ~~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~~~~~~~---  139 (232)
T 3ntv_A           67 IRMNNVKNILEIGTAI-GYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIE---GNALEQFENVN---  139 (232)
T ss_dssp             HHHHTCCEEEEECCSS-SHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEE---SCGGGCHHHHT---
T ss_pred             HhhcCCCEEEEEeCch-hHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---CCHHHHHHhhc---
Confidence            3346788999999876 7778888885533489999999987776655    3432 221111   23322222 22   


Q ss_pred             cCCCccEEEEccCCh---HHHHHHHHhhcCCCEEEEEc
Q 018075          248 MGSGIDVSFDCVGFD---KTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       248 ~~~~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~~g  282 (361)
                       ...||+|+-.....   ..++.+.+.|+|||.++.-.
T Consensus       140 -~~~fD~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~d~  176 (232)
T 3ntv_A          140 -DKVYDMIFIDAAKAQSKKFFEIYTPLLKHQGLVITDN  176 (232)
T ss_dssp             -TSCEEEEEEETTSSSHHHHHHHHGGGEEEEEEEEEEC
T ss_pred             -cCCccEEEEcCcHHHHHHHHHHHHHhcCCCeEEEEee
Confidence             46799998654322   35677889999999998743

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=96.01  E-value=0.029  Score=48.12  Aligned_cols=82  Identities=17%  Similarity=0.219  Sum_probs=47.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCC-EEeecC-CCccchhHHHHHHHhhcCCCcc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGAD-ETAKVS-TDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+ .+++++.. ..+..+ .+..+..+.+.++.+.. +++|
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id   83 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGA-TVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEF-GHVH   83 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHc-CCCC
Confidence            578899998 59999999998888999 5777777766543 34445432 112111 22234444444443322 4799


Q ss_pred             EEEEccCC
Q 018075          254 VSFDCVGF  261 (361)
Q Consensus       254 ~vld~~g~  261 (361)
                      +++++.|.
T Consensus        84 ~lv~nAg~   91 (257)
T 3tpc_A           84 GLVNCAGT   91 (257)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99998874

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=96.00  E-value=0.15  Score=44.70  Aligned_cols=83  Identities=19%  Similarity=0.240  Sum_probs=50.9

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCC------------hhHHH----HHHHcCCCEE-eecC-CCccch
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVD------------VQRLS----IARNLGADET-AKVS-TDIEDV  237 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~------------~~~~~----~~~~lg~~~~-~~~~-~~~~~~  237 (361)
                      -.|.++||.| ++++|.+.++.+...|+ .|+.++++            .++.+    .+++.+.... +..+ .+..+.
T Consensus        26 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v  104 (299)
T 3t7c_A           26 VEGKVAFITGAARGQGRSHAITLAREGA-DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAM  104 (299)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence            3578999998 58999999998888999 57777665            33322    2333443321 1111 222334


Q ss_pred             hHHHHHHHhhcCCCccEEEEccCC
Q 018075          238 DTDVGKIQNAMGSGIDVSFDCVGF  261 (361)
Q Consensus       238 ~~~~~~~~~~~~~~~d~vld~~g~  261 (361)
                      .+.+.++.+.. +++|+++++.|.
T Consensus       105 ~~~~~~~~~~~-g~iD~lv~nAg~  127 (299)
T 3t7c_A          105 QAAVDDGVTQL-GRLDIVLANAAL  127 (299)
T ss_dssp             HHHHHHHHHHH-SCCCEEEECCCC
T ss_pred             HHHHHHHHHHh-CCCCEEEECCCC
Confidence            44444443322 479999998873

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=96.00  E-value=0.01  Score=51.34  Aligned_cols=77  Identities=22%  Similarity=0.334  Sum_probs=47.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  256 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  256 (361)
                      .|.++||.| +|++|.+.++.+...|+ .|+.++++.++.+....+.    .++ .+..+....+.++.+. -+++|+++
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~----~Dv-~~~~~~~~~~~~~~~~-~g~iD~lv   99 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGA-RVAVADRAVAGIAADLHLP----GDL-REAAYADGLPGAVAAG-LGRLDIVV   99 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECSSCCTTSCCSEECC----CCT-TSHHHHHHHHHHHHHH-HSCCCEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHhhhccC----cCC-CCHHHHHHHHHHHHHh-cCCCCEEE
Confidence            578899998 59999999998888999 6888877654432111111    111 1222233333333322 24799999


Q ss_pred             EccCC
Q 018075          257 DCVGF  261 (361)
Q Consensus       257 d~~g~  261 (361)
                      ++.|.
T Consensus       100 nnAg~  104 (266)
T 3uxy_A          100 NNAGV  104 (266)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            98874

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=96.00  E-value=0.075  Score=46.16  Aligned_cols=89  Identities=20%  Similarity=0.169  Sum_probs=61.1

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCC-EEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCC-CccEEEEc
Q 018075          181 NVMIMGSGPIGLVTLLAARAFGAP-RIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS-GIDVSFDC  258 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~g~~-~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~vld~  258 (361)
                      +|.|+|+|.+|.+.++.++..|.. .|++.++++++.+.+++.|......  .   +..+.        -. +.|+|+.|
T Consensus         3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~--~---~~~~~--------~~~~aDvVila   69 (281)
T 2g5c_A            3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGT--T---SIAKV--------EDFSPDFVMLS   69 (281)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEE--S---CGGGG--------GGTCCSEEEEC
T ss_pred             EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCccccc--C---CHHHH--------hcCCCCEEEEc
Confidence            689999999999999988888862 5888899999888888888642111  1   11111        13 68999999


Q ss_pred             cCChHH---HHHHHHhhcCCCEEEEEc
Q 018075          259 VGFDKT---MSTALNATRPGGKVCLIG  282 (361)
Q Consensus       259 ~g~~~~---~~~~~~~l~~~G~~v~~g  282 (361)
                      +.....   +..+...++++..++.++
T Consensus        70 vp~~~~~~v~~~l~~~l~~~~iv~~~~   96 (281)
T 2g5c_A           70 SPVRTFREIAKKLSYILSEDATVTDQG   96 (281)
T ss_dssp             SCHHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred             CCHHHHHHHHHHHHhhCCCCcEEEECC
Confidence            986522   233344567777666654

>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}

Probab=96.00  E-value=0.047  Score=44.26  Aligned_cols=99  Identities=18%  Similarity=0.164  Sum_probs=62.3

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhhcCCCc
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      .++++||=+|||. |..++.+++ .+...|++++.+++..+.+++    .+.+.+....   .+..+.....   ....|
T Consensus        43 ~~~~~vLDlgcG~-G~~~~~~~~-~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~---~d~~~~~~~~---~~~~f  114 (189)
T 3p9n_A           43 LTGLAVLDLYAGS-GALGLEALS-RGAASVLFVESDQRSAAVIARNIEALGLSGATLRR---GAVAAVVAAG---TTSPV  114 (189)
T ss_dssp             CTTCEEEEETCTT-CHHHHHHHH-TTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEE---SCHHHHHHHC---CSSCC
T ss_pred             CCCCEEEEeCCCc-CHHHHHHHH-CCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEE---ccHHHHHhhc---cCCCc
Confidence            5889999998764 555555555 466689999999988776655    3433222111   2333332221   24689


Q ss_pred             cEEEEcc--CC-----hHHHHHHHH--hhcCCCEEEEEcc
Q 018075          253 DVSFDCV--GF-----DKTMSTALN--ATRPGGKVCLIGL  283 (361)
Q Consensus       253 d~vld~~--g~-----~~~~~~~~~--~l~~~G~~v~~g~  283 (361)
                      |+|+-..  ..     ...+..+.+  .|+|+|.++....
T Consensus       115 D~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~  154 (189)
T 3p9n_A          115 DLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERA  154 (189)
T ss_dssp             SEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEE
T ss_pred             cEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEec
Confidence            9998742  11     134566666  8999999987643

>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E

Probab=95.99  E-value=0.02  Score=48.81  Aligned_cols=102  Identities=17%  Similarity=0.201  Sum_probs=64.9

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----c--------CCCEEeecCCCccchhHHH
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----L--------GADETAKVSTDIEDVDTDV  241 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----l--------g~~~~~~~~~~~~~~~~~~  241 (361)
                      ..++++.+||-+|||. |..++.+++......+++++.+++..+.+++    .        +...+.....+..++   +
T Consensus        45 ~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~---l  120 (246)
T 2vdv_E           45 GQMTKKVTIADIGCGF-GGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKF---L  120 (246)
T ss_dssp             -CBSCCEEEEEETCTT-SHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSC---G
T ss_pred             ccCCCCCEEEEEcCCC-CHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHH---H
Confidence            3467888899999876 7788888887643379999999987766643    2        433322222221111   1


Q ss_pred             HHHHhhcCCCccEEEEccCCh--------------HHHHHHHHhhcCCCEEEEE
Q 018075          242 GKIQNAMGSGIDVSFDCVGFD--------------KTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       242 ~~~~~~~~~~~d~vld~~g~~--------------~~~~~~~~~l~~~G~~v~~  281 (361)
                      ...  .....+|.|+-....+              ..+..+.+.|++||.+++.
T Consensus       121 ~~~--~~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~  172 (246)
T 2vdv_E          121 PNF--FEKGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTI  172 (246)
T ss_dssp             GGT--SCTTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEE
T ss_pred             HHh--ccccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEE
Confidence            111  1134677776544333              5788899999999999874

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=95.99  E-value=0.094  Score=45.73  Aligned_cols=87  Identities=14%  Similarity=0.126  Sum_probs=61.8

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEcc
Q 018075          180 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV  259 (361)
Q Consensus       180 ~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  259 (361)
                      .+|.|+|+|.+|...++.+...|. .|++.++++++.+.+.+.|....       .+..+.+        ...|+||-|+
T Consensus         2 ~~i~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~~~~~~--------~~aDvvi~~v   65 (287)
T 3pef_A            2 QKFGFIGLGIMGSAMAKNLVKAGC-SVTIWNRSPEKAEELAALGAERA-------ATPCEVV--------ESCPVTFAML   65 (287)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEEC-------SSHHHHH--------HHCSEEEECC
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCCeec-------CCHHHHH--------hcCCEEEEEc
Confidence            478999999999999998888898 68888999998888777765321       1222222        2478999988


Q ss_pred             CChHHHHHHH-------HhhcCCCEEEEEc
Q 018075          260 GFDKTMSTAL-------NATRPGGKVCLIG  282 (361)
Q Consensus       260 g~~~~~~~~~-------~~l~~~G~~v~~g  282 (361)
                      ..+......+       ..++++..++..+
T Consensus        66 p~~~~~~~v~~~~~~l~~~l~~~~~vi~~s   95 (287)
T 3pef_A           66 ADPAAAEEVCFGKHGVLEGIGEGRGYVDMS   95 (287)
T ss_dssp             SSHHHHHHHHHSTTCHHHHCCTTCEEEECS
T ss_pred             CCHHHHHHHHcCcchHhhcCCCCCEEEeCC
Confidence            8654454444       5566776666554

>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}

Probab=95.99  E-value=0.0088  Score=47.65  Aligned_cols=99  Identities=15%  Similarity=0.200  Sum_probs=68.4

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCC
Q 018075          172 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       172 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (361)
                      +...++++.+||-+|+|. |..+..+++.. . .+++++.+++..+.+++.... +.....   +        .......
T Consensus        11 ~~~~~~~~~~vLDiG~G~-G~~~~~l~~~~-~-~v~~vD~s~~~~~~a~~~~~~-v~~~~~---d--------~~~~~~~   75 (170)
T 3i9f_A           11 PNIFEGKKGVIVDYGCGN-GFYCKYLLEFA-T-KLYCIDINVIALKEVKEKFDS-VITLSD---P--------KEIPDNS   75 (170)
T ss_dssp             HHHHSSCCEEEEEETCTT-CTTHHHHHTTE-E-EEEEECSCHHHHHHHHHHCTT-SEEESS---G--------GGSCTTC
T ss_pred             HhcCcCCCCeEEEECCCC-CHHHHHHHhhc-C-eEEEEeCCHHHHHHHHHhCCC-cEEEeC---C--------CCCCCCc
Confidence            334568899999999876 77777887765 3 799999999988888876221 111111   1        0112457


Q ss_pred             ccEEEEccCC------hHHHHHHHHhhcCCCEEEEEccCC
Q 018075          252 IDVSFDCVGF------DKTMSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       252 ~d~vld~~g~------~~~~~~~~~~l~~~G~~v~~g~~~  285 (361)
                      +|+|+....-      ...++.+.+.|+|+|+++......
T Consensus        76 ~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~  115 (170)
T 3i9f_A           76 VDFILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRK  115 (170)
T ss_dssp             EEEEEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECS
T ss_pred             eEEEEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCc
Confidence            9999874422      246788999999999999876443

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=95.99  E-value=0.088  Score=45.88  Aligned_cols=82  Identities=13%  Similarity=0.151  Sum_probs=49.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCh-hHHH-HHH----HcCCCE-EeecC-CC----ccchhHHHHHH
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDV-QRLS-IAR----NLGADE-TAKVS-TD----IEDVDTDVGKI  244 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~-~~~~-~~~----~lg~~~-~~~~~-~~----~~~~~~~~~~~  244 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.++++. ++.+ .++    +.+... .+..+ .+    ..+..+.+.++
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~  100 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGY-RVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSC  100 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHH
Confidence            467899998 59999999998888999 577777776 5443 222    223221 11111 12    22333333333


Q ss_pred             HhhcCCCccEEEEccCC
Q 018075          245 QNAMGSGIDVSFDCVGF  261 (361)
Q Consensus       245 ~~~~~~~~d~vld~~g~  261 (361)
                      .+. -+++|+++++.|.
T Consensus       101 ~~~-~g~iD~lvnnAG~  116 (288)
T 2x9g_A          101 FRA-FGRCDVLVNNASA  116 (288)
T ss_dssp             HHH-HSCCCEEEECCCC
T ss_pred             HHh-cCCCCEEEECCCC
Confidence            322 2479999998873

>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}

Probab=95.98  E-value=0.056  Score=45.46  Aligned_cols=101  Identities=15%  Similarity=0.201  Sum_probs=64.7

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChh----HHHHHHHcCCCEEeecCCCccchhHHHHHHHhh
Q 018075          173 RANVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQ----RLSIARNLGADETAKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       173 ~~~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~----~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~  247 (361)
                      ...++++++||-+|||. |..+..+++..| ...|++++.+++    ..+.+++..--..+.  .+..+.. .+.    .
T Consensus        72 ~~~~~~~~~vLDlG~G~-G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~--~d~~~~~-~~~----~  143 (233)
T 2ipx_A           72 QIHIKPGAKVLYLGAAS-GTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVI--EDARHPH-KYR----M  143 (233)
T ss_dssp             CCCCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEEC--SCTTCGG-GGG----G
T ss_pred             eecCCCCCEEEEEcccC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEE--cccCChh-hhc----c
Confidence            45688999999999887 888889998874 237999999965    344444431111111  1111110 000    1


Q ss_pred             cCCCccEEEEccCChH----HHHHHHHhhcCCCEEEEE
Q 018075          248 MGSGIDVSFDCVGFDK----TMSTALNATRPGGKVCLI  281 (361)
Q Consensus       248 ~~~~~d~vld~~g~~~----~~~~~~~~l~~~G~~v~~  281 (361)
                      ....+|+|+.....+.    .+..+.+.|+|+|+++..
T Consensus       144 ~~~~~D~V~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~  181 (233)
T 2ipx_A          144 LIAMVDVIFADVAQPDQTRIVALNAHTFLRNGGHFVIS  181 (233)
T ss_dssp             GCCCEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cCCcEEEEEEcCCCccHHHHHHHHHHHHcCCCeEEEEE
Confidence            1457999998655431    256688999999999873

>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A

Probab=95.98  E-value=0.012  Score=50.54  Aligned_cols=97  Identities=21%  Similarity=0.275  Sum_probs=65.9

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcC---CCEEeecCCCccchhHHHHHHHhhcCC
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG---ADETAKVSTDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg---~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (361)
                      ..++++.+||-+|||. |..+..+++. +. .+++++.+++..+.+++.-   ...+.....+..++.     +   ...
T Consensus        35 ~~~~~~~~vLDiG~G~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~-----~---~~~  103 (263)
T 2yqz_A           35 HPKGEEPVFLELGVGT-GRIALPLIAR-GY-RYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIP-----L---PDE  103 (263)
T ss_dssp             CCSSSCCEEEEETCTT-STTHHHHHTT-TC-EEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCC-----S---CTT
T ss_pred             cCCCCCCEEEEeCCcC-CHHHHHHHHC-CC-EEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCC-----C---CCC
Confidence            3678899999999876 7777788775 66 7999999999888887651   111111111111110     1   135


Q ss_pred             CccEEEEccC------ChHHHHHHHHhhcCCCEEEEE
Q 018075          251 GIDVSFDCVG------FDKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       251 ~~d~vld~~g------~~~~~~~~~~~l~~~G~~v~~  281 (361)
                      .||+|+....      ....+..+.+.|+|||+++..
T Consensus       104 ~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~  140 (263)
T 2yqz_A          104 SVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEG  140 (263)
T ss_dssp             CEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CeeEEEECCchhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence            7999997543      134788889999999999876

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=95.98  E-value=0.093  Score=46.64  Aligned_cols=89  Identities=17%  Similarity=0.235  Sum_probs=63.2

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEc
Q 018075          179 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  258 (361)
Q Consensus       179 g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  258 (361)
                      ..+|.|+|+|.+|...++.+...|. .|++.++++++.+.+.+.|+...       .+..+.+        ...|+||-+
T Consensus        31 ~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~~-------~~~~e~~--------~~aDvVi~~   94 (320)
T 4dll_A           31 ARKITFLGTGSMGLPMARRLCEAGY-ALQVWNRTPARAASLAALGATIH-------EQARAAA--------RDADIVVSM   94 (320)
T ss_dssp             CSEEEEECCTTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTCEEE-------SSHHHHH--------TTCSEEEEC
T ss_pred             CCEEEEECccHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHCCCEee-------CCHHHHH--------hcCCEEEEE
Confidence            4689999999999999998888898 68889999999888777765321       1222221        357899988


Q ss_pred             cCChHHHHHHH------HhhcCCCEEEEEcc
Q 018075          259 VGFDKTMSTAL------NATRPGGKVCLIGL  283 (361)
Q Consensus       259 ~g~~~~~~~~~------~~l~~~G~~v~~g~  283 (361)
                      +..+......+      ..+.++..++.++.
T Consensus        95 vp~~~~~~~v~~~~~~~~~l~~~~~vi~~st  125 (320)
T 4dll_A           95 LENGAVVQDVLFAQGVAAAMKPGSLFLDMAS  125 (320)
T ss_dssp             CSSHHHHHHHHTTTCHHHHCCTTCEEEECSC
T ss_pred             CCCHHHHHHHHcchhHHhhCCCCCEEEecCC
Confidence            88654444444      35667776666654

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=95.98  E-value=0.059  Score=46.18  Aligned_cols=82  Identities=18%  Similarity=0.284  Sum_probs=50.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcCC-----------CEEeecC-CCccchhHHHHH
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGA-----------DETAKVS-TDIEDVDTDVGK  243 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~-----------~~~~~~~-~~~~~~~~~~~~  243 (361)
                      .+.++||.| +|++|.+.+..+...|+ .|+.++++.++.+.+ +++..           -..+..+ .+..++.+.+.+
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   84 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGA-TVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQ   84 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHH
Confidence            467899998 59999999998888999 688888887765433 33321           1112111 222334444444


Q ss_pred             HHhhcCCCc-cEEEEccCC
Q 018075          244 IQNAMGSGI-DVSFDCVGF  261 (361)
Q Consensus       244 ~~~~~~~~~-d~vld~~g~  261 (361)
                      +.... +++ |+++++.|.
T Consensus        85 ~~~~~-g~i~d~vi~~Ag~  102 (264)
T 2pd6_A           85 VQACF-SRPPSVVVSCAGI  102 (264)
T ss_dssp             HHHHH-SSCCSEEEECCCC
T ss_pred             HHHHh-CCCCeEEEECCCc
Confidence            43322 356 999998873

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=95.98  E-value=0.045  Score=47.04  Aligned_cols=82  Identities=26%  Similarity=0.387  Sum_probs=51.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHc---CCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---GADE-TAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.++++.++.+.+ +++   +... .+..+ .+..+....+.++.+.. +
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g   83 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF-G   83 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-C
Confidence            468899998 59999999998888999 678888887665432 222   4321 11111 22233333344333222 4


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|+++++.|.
T Consensus        84 ~id~lv~nAg~   94 (262)
T 1zem_A           84 KIDFLFNNAGY   94 (262)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*

Probab=95.98  E-value=0.02  Score=50.88  Aligned_cols=97  Identities=15%  Similarity=0.186  Sum_probs=65.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcC---------CCEEeecCCCccchhHHHHHHHhh
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG---------ADETAKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg---------~~~~~~~~~~~~~~~~~~~~~~~~  247 (361)
                      .++.+||++|+|. |..+..+++..+...+++++.+++-.+.+++.-         ...+....   .+..+.+..    
T Consensus        76 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~---~D~~~~l~~----  147 (314)
T 1uir_A           76 PEPKRVLIVGGGE-GATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVI---DDARAYLER----  147 (314)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEE---SCHHHHHHH----
T ss_pred             CCCCeEEEEcCCc-CHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEE---chHHHHHHh----
Confidence            4568999999776 667778888765558999999998888776521         11111111   233333222    


Q ss_pred             cCCCccEEEEccC-------------ChHHHHHHHHhhcCCCEEEEE
Q 018075          248 MGSGIDVSFDCVG-------------FDKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       248 ~~~~~d~vld~~g-------------~~~~~~~~~~~l~~~G~~v~~  281 (361)
                      ....||+|+....             ....++.+.+.|+|+|.++..
T Consensus       148 ~~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~  194 (314)
T 1uir_A          148 TEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQ  194 (314)
T ss_dssp             CCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred             cCCCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEE
Confidence            2567999986332             134688899999999999875

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=95.97  E-value=0.039  Score=48.51  Aligned_cols=83  Identities=16%  Similarity=0.191  Sum_probs=51.1

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHc---CCC--EEeecC-CCc-cchhHHHHHHHhh
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNL---GAD--ETAKVS-TDI-EDVDTDVGKIQNA  247 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~l---g~~--~~~~~~-~~~-~~~~~~~~~~~~~  247 (361)
                      ..+.++||.| +|++|.+.++.+...|+ .|+.++++.++.+ .++++   +..  ..+..+ .+. .........+.+.
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~   88 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTH   88 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHh
Confidence            4578899998 59999999998888999 6888888877643 23333   221  112211 122 2333333333322


Q ss_pred             cCCCccEEEEccCC
Q 018075          248 MGSGIDVSFDCVGF  261 (361)
Q Consensus       248 ~~~~~d~vld~~g~  261 (361)
                       .+++|+++++.|.
T Consensus        89 -~g~iD~lv~nAg~  101 (311)
T 3o26_A           89 -FGKLDILVNNAGV  101 (311)
T ss_dssp             -HSSCCEEEECCCC
T ss_pred             -CCCCCEEEECCcc
Confidence             2479999999985

>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*

Probab=95.97  E-value=0.027  Score=52.13  Aligned_cols=102  Identities=12%  Similarity=0.154  Sum_probs=71.0

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCC
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (361)
                      +....++++.+||-+|||. |..+..+++ .|. .+++++.+++..+.+++.+.........  .+.   ...+. ....
T Consensus       100 ~~~~~~~~~~~VLDiGcG~-G~~~~~l~~-~g~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~--~~~---~~~l~-~~~~  170 (416)
T 4e2x_A          100 LATELTGPDPFIVEIGCND-GIMLRTIQE-AGV-RHLGFEPSSGVAAKAREKGIRVRTDFFE--KAT---ADDVR-RTEG  170 (416)
T ss_dssp             HHTTTCSSSCEEEEETCTT-TTTHHHHHH-TTC-EEEEECCCHHHHHHHHTTTCCEECSCCS--HHH---HHHHH-HHHC
T ss_pred             HHHhCCCCCCEEEEecCCC-CHHHHHHHH-cCC-cEEEECCCHHHHHHHHHcCCCcceeeec--hhh---Hhhcc-cCCC
Confidence            3456678899999999876 667777776 477 7999999999999999887655432111  111   11111 1236


Q ss_pred             CccEEEEccC------ChHHHHHHHHhhcCCCEEEEE
Q 018075          251 GIDVSFDCVG------FDKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       251 ~~d~vld~~g------~~~~~~~~~~~l~~~G~~v~~  281 (361)
                      .||+|+..-.      -...++.+.+.|+|||+++..
T Consensus       171 ~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~  207 (416)
T 4e2x_A          171 PANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFE  207 (416)
T ss_dssp             CEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEE
Confidence            8999987532      124788899999999999875

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=95.97  E-value=0.028  Score=49.01  Aligned_cols=79  Identities=22%  Similarity=0.280  Sum_probs=49.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH----HHcCCCEE--eecC-CCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADET--AKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~--~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      ++.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+    ++.+...+  +..+ .+..+..+.+.++.+.. 
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~-  104 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM-  104 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHc-
Confidence            467899998 59999999998888999 688888888765433    22343222  2111 12223333333333222 


Q ss_pred             CCccEEEEc
Q 018075          250 SGIDVSFDC  258 (361)
Q Consensus       250 ~~~d~vld~  258 (361)
                      +++|+++++
T Consensus       105 g~iD~li~n  113 (286)
T 1xu9_A          105 GGLDMLILN  113 (286)
T ss_dssp             TSCSEEEEC
T ss_pred             CCCCEEEEC
Confidence            479999998

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=95.97  E-value=0.045  Score=47.35  Aligned_cols=82  Identities=26%  Similarity=0.384  Sum_probs=51.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCC--C-EEeecC-CCccchhHHHHHHHhhcCCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGA--D-ETAKVS-TDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~--~-~~~~~~-~~~~~~~~~~~~~~~~~~~~  251 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.++++.++.+ ..++++.  . ..+..+ .+..++.+.+.++.... .+
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~   92 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKH-GK   92 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH-SC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHc-CC
Confidence            568899998 59999999998888999 6788888776543 3344432  1 112111 22233333443333222 47


Q ss_pred             ccEEEEccCC
Q 018075          252 IDVSFDCVGF  261 (361)
Q Consensus       252 ~d~vld~~g~  261 (361)
                      +|+++++.|.
T Consensus        93 id~li~~Ag~  102 (278)
T 2bgk_A           93 LDIMFGNVGV  102 (278)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            9999998873

>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}

Probab=95.97  E-value=0.057  Score=46.79  Aligned_cols=96  Identities=20%  Similarity=0.251  Sum_probs=66.8

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcC--CCEEeecCCCccchhHHHHHHHhhcC
Q 018075          172 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG--ADETAKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       172 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg--~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      .....+++.+||-+|||. |..+..+++ .+. .+++++.+++..+.+++..  .... .  .+..++       .  ..
T Consensus        51 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~gvD~s~~~~~~a~~~~~~~~~~-~--~d~~~~-------~--~~  115 (279)
T 3ccf_A           51 QLLNPQPGEFILDLGCGT-GQLTEKIAQ-SGA-EVLGTDNAATMIEKARQNYPHLHFD-V--ADARNF-------R--VD  115 (279)
T ss_dssp             HHHCCCTTCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHCTTSCEE-E--CCTTTC-------C--CS
T ss_pred             HHhCCCCCCEEEEecCCC-CHHHHHHHh-CCC-eEEEEECCHHHHHHHHhhCCCCEEE-E--CChhhC-------C--cC
Confidence            344568899999999876 777888887 676 7999999999888887642  2221 1  111111       0  13


Q ss_pred             CCccEEEEccCC------hHHHHHHHHhhcCCCEEEEEc
Q 018075          250 SGIDVSFDCVGF------DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       250 ~~~d~vld~~g~------~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ..||+|+....-      ...+..+.+.|+|||+++...
T Consensus       116 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~  154 (279)
T 3ccf_A          116 KPLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEF  154 (279)
T ss_dssp             SCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEe
Confidence            579999875321      246888999999999998754

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=95.96  E-value=0.048  Score=48.84  Aligned_cols=88  Identities=18%  Similarity=0.240  Sum_probs=63.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      .|.+|.|+|.|.+|...++.++..|. .|++.+++.++ +.++++|...        .++.+.+        ...|+|+.
T Consensus       149 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~~~--------~~l~~~l--------~~aDvVil  210 (334)
T 2dbq_A          149 YGKTIGIIGLGRIGQAIAKRAKGFNM-RILYYSRTRKE-EVERELNAEF--------KPLEDLL--------RESDFVVL  210 (334)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHHCCEE--------CCHHHHH--------HHCSEEEE
T ss_pred             CCCEEEEEccCHHHHHHHHHHHhCCC-EEEEECCCcch-hhHhhcCccc--------CCHHHHH--------hhCCEEEE
Confidence            57899999999999999999999999 68888888776 5566666521        1222222        25789999


Q ss_pred             ccCChHH----H-HHHHHhhcCCCEEEEEcc
Q 018075          258 CVGFDKT----M-STALNATRPGGKVCLIGL  283 (361)
Q Consensus       258 ~~g~~~~----~-~~~~~~l~~~G~~v~~g~  283 (361)
                      ++.....    + ...+..|+++..++.++.
T Consensus       211 ~vp~~~~t~~~i~~~~~~~mk~~ailIn~sr  241 (334)
T 2dbq_A          211 AVPLTRETYHLINEERLKLMKKTAILINIAR  241 (334)
T ss_dssp             CCCCCTTTTTCBCHHHHHHSCTTCEEEECSC
T ss_pred             CCCCChHHHHhhCHHHHhcCCCCcEEEECCC
Confidence            8875431    2 356778888888877653

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=95.96  E-value=0.038  Score=47.57  Aligned_cols=82  Identities=20%  Similarity=0.321  Sum_probs=52.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HH---cCCCE--EeecC-CCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN---LGADE--TAKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~--~~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      .|.++||.| +|++|.+.++.+...|+ .|+.++++.++.+.+ ++   .+...  .+..+ .+..+..+.+.++.+.. 
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   86 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEF-   86 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHh-
Confidence            578899998 69999999998888999 688888888765432 22   23111  12111 22233444444443322 


Q ss_pred             CCccEEEEccCC
Q 018075          250 SGIDVSFDCVGF  261 (361)
Q Consensus       250 ~~~d~vld~~g~  261 (361)
                      +++|+++++.|.
T Consensus        87 g~id~lvnnAg~   98 (262)
T 3pk0_A           87 GGIDVVCANAGV   98 (262)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999873

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=95.96  E-value=0.058  Score=46.65  Aligned_cols=82  Identities=23%  Similarity=0.234  Sum_probs=53.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcCCCEEeecC-CCccchhHHHHHHHhhcCCCccE
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADETAKVS-TDIEDVDTDVGKIQNAMGSGIDV  254 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~  254 (361)
                      ++.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ +++.....+..+ .+..+..+.+.++.+.. +++|+
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~iD~   85 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRF-GRLDC   85 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHH-SCCCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHc-CCCCE
Confidence            578899998 59999999998888999 688888887766543 344322222221 22233434444433222 47999


Q ss_pred             EEEccCC
Q 018075          255 SFDCVGF  261 (361)
Q Consensus       255 vld~~g~  261 (361)
                      ++++.|.
T Consensus        86 lv~nAg~   92 (270)
T 1yde_A           86 VVNNAGH   92 (270)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9998863

>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}

Probab=95.95  E-value=0.089  Score=46.89  Aligned_cols=130  Identities=15%  Similarity=0.120  Sum_probs=77.3

Q ss_pred             EEEEECCCHHHHHH-H-HHHHHcCCCEEEEEeCChhHHH-HHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          181 NVMIMGSGPIGLVT-L-LAARAFGAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       181 ~vlI~G~g~~G~~a-i-~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      +|.|+|+|.+|... + .+.+ .+.+.+.+++.++++.+ +++++|....  +    .++.+.+      ...++|+|+.
T Consensus         2 ~vgiiG~G~~g~~~~~~~l~~-~~~~~vav~d~~~~~~~~~~~~~g~~~~--~----~~~~~~l------~~~~~D~V~i   68 (332)
T 2glx_A            2 RWGLIGASTIAREWVIGAIRA-TGGEVVSMMSTSAERGAAYATENGIGKS--V----TSVEELV------GDPDVDAVYV   68 (332)
T ss_dssp             EEEEESCCHHHHHTHHHHHHH-TTCEEEEEECSCHHHHHHHHHHTTCSCC--B----SCHHHHH------TCTTCCEEEE
T ss_pred             eEEEEcccHHHHHhhhHHhhc-CCCeEEEEECCCHHHHHHHHHHcCCCcc--c----CCHHHHh------cCCCCCEEEE
Confidence            68899999999876 5 4455 77754456677777664 5566775421  1    1332222      1247999999


Q ss_pred             ccCChHHHHHHHHhhcCCCEEEEEccCCCCcceech---Hh-hhcCcEEE-Eeec-CCCcHHHHHHHHHcCCC
Q 018075          258 CVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT---PA-AAREVDVI-GIFR-YRSTWPLCIEFLRSGKI  324 (361)
Q Consensus       258 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~-~~~~~~i~-~~~~-~~~~~~~~~~~l~~g~~  324 (361)
                      ++....+.+.+...|..|-.+ .+..+.....-...   .. -.+++.+. +... +...++.+.+++++|.+
T Consensus        69 ~tp~~~h~~~~~~al~~Gk~v-~~ekP~~~~~~~~~~l~~~a~~~g~~~~~~~~~r~~p~~~~~~~~i~~g~i  140 (332)
T 2glx_A           69 STTNELHREQTLAAIRAGKHV-LCEKPLAMTLEDAREMVVAAREAGVVLGTNHHLRNAAAHRAMRDAIAEGRI  140 (332)
T ss_dssp             CSCGGGHHHHHHHHHHTTCEE-EECSSSCSSHHHHHHHHHHHHHHTCCEEECCCGGGSHHHHHHHHHHHTTTT
T ss_pred             eCChhHhHHHHHHHHHCCCeE-EEeCCCcCCHHHHHHHHHHHHHcCCEEEEeehhhcCHHHHHHHHHHHcCCC
Confidence            999887888888888875444 45432211111111   11 12233332 2222 24567888899999887

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=95.95  E-value=0.034  Score=48.05  Aligned_cols=89  Identities=13%  Similarity=0.140  Sum_probs=60.7

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEc
Q 018075          179 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  258 (361)
Q Consensus       179 g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  258 (361)
                      +.+++|+|+|+.|.+++..+...|. .|.++.++.++.+.+.+++... ..+.    +       +     ..+|+||+|
T Consensus       118 ~k~vlvlGaGGaaraia~~L~~~G~-~v~V~nRt~~ka~~la~~~~~~-~~~~----~-------l-----~~~DiVIna  179 (269)
T 3phh_A          118 YQNALILGAGGSAKALACELKKQGL-QVSVLNRSSRGLDFFQRLGCDC-FMEP----P-------K-----SAFDLIINA  179 (269)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCTTHHHHHHHTCEE-ESSC----C-------S-----SCCSEEEEC
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeE-ecHH----H-------h-----ccCCEEEEc
Confidence            8999999999999999999999994 7888888887765444777432 1211    1       1     179999998


Q ss_pred             cCCh-----HH-HHHHHHhhcCCCEEEEEccCC
Q 018075          259 VGFD-----KT-MSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       259 ~g~~-----~~-~~~~~~~l~~~G~~v~~g~~~  285 (361)
                      ++..     .. .+.+...++++..++.+-..+
T Consensus       180 Tp~Gm~~~~~l~~~~l~~~l~~~~~v~D~vY~P  212 (269)
T 3phh_A          180 TSASLHNELPLNKEVLKGYFKEGKLAYDLAYGF  212 (269)
T ss_dssp             CTTCCCCSCSSCHHHHHHHHHHCSEEEESCCSS
T ss_pred             ccCCCCCCCCCChHHHHhhCCCCCEEEEeCCCC
Confidence            7643     01 112223677788777665443

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=95.95  E-value=0.084  Score=46.26  Aligned_cols=86  Identities=14%  Similarity=0.191  Sum_probs=61.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccC
Q 018075          181 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG  260 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  260 (361)
                      +|.|+|+|.+|...+..+...|. .|...++++++.+.+.+.|...   .    .+..+.+        .+.|+||.|+.
T Consensus         7 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~----~~~~~~~--------~~~D~vi~~v~   70 (299)
T 1vpd_A            7 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAET---A----STAKAIA--------EQCDVIITMLP   70 (299)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE---C----SSHHHHH--------HHCSEEEECCS
T ss_pred             eEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCee---c----CCHHHHH--------hCCCEEEEECC
Confidence            79999999999999888888888 6888899988888777766432   1    1222222        24899999998


Q ss_pred             ChHHHHHHH-------HhhcCCCEEEEEc
Q 018075          261 FDKTMSTAL-------NATRPGGKVCLIG  282 (361)
Q Consensus       261 ~~~~~~~~~-------~~l~~~G~~v~~g  282 (361)
                      .+...+..+       ..+.++..++.++
T Consensus        71 ~~~~~~~~~~~~~~l~~~l~~~~~vv~~s   99 (299)
T 1vpd_A           71 NSPHVKEVALGENGIIEGAKPGTVLIDMS   99 (299)
T ss_dssp             SHHHHHHHHHSTTCHHHHCCTTCEEEECS
T ss_pred             CHHHHHHHHhCcchHhhcCCCCCEEEECC
Confidence            665555554       5577777776654

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=95.93  E-value=0.042  Score=47.64  Aligned_cols=99  Identities=12%  Similarity=0.198  Sum_probs=63.4

Q ss_pred             HHhcCC-CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCC--CEEeecCCCccchhHHHHHHHh
Q 018075          171 CRRANV-GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGA--DETAKVSTDIEDVDTDVGKIQN  246 (361)
Q Consensus       171 l~~~~~-~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~--~~~~~~~~~~~~~~~~~~~~~~  246 (361)
                      ++...+ -.+.+++|+|+|++|.+++..+...|+..|+.+.++.++.+ ++++++.  .....+    .+       +. 
T Consensus       111 L~~~~~~l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~----~~-------l~-  178 (272)
T 3pwz_A          111 EENLGEPLRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRY----EA-------LE-  178 (272)
T ss_dssp             HTTSCCCCTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECS----GG-------GT-
T ss_pred             HHHcCCCccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeH----HH-------hc-
Confidence            444333 36889999999999999999888899867888888887754 5566654  111111    11       11 


Q ss_pred             hcCCCccEEEEccCChHHHHH----HHHhhcCCCEEEEEccC
Q 018075          247 AMGSGIDVSFDCVGFDKTMST----ALNATRPGGKVCLIGLA  284 (361)
Q Consensus       247 ~~~~~~d~vld~~g~~~~~~~----~~~~l~~~G~~v~~g~~  284 (361)
                        ..++|+|+++++.. ....    ....++++..++.+-..
T Consensus       179 --~~~~DivInaTp~g-m~~~~~~i~~~~l~~~~~V~DlvY~  217 (272)
T 3pwz_A          179 --GQSFDIVVNATSAS-LTADLPPLPADVLGEAALAYELAYG  217 (272)
T ss_dssp             --TCCCSEEEECSSGG-GGTCCCCCCGGGGTTCSEEEESSCS
T ss_pred             --ccCCCEEEECCCCC-CCCCCCCCCHHHhCcCCEEEEeecC
Confidence              15799999998753 1110    12456677666655443

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=95.93  E-value=0.036  Score=47.59  Aligned_cols=82  Identities=24%  Similarity=0.351  Sum_probs=52.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCCE-EeecC-CCccchhHHHHHHHhhcCCCcc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      ++.++||.| +|++|.+.++.+...|+ .|+.++++.++.+ ..++++... .+..+ .+..+..+.+.++.+.. +++|
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~id   88 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKF-GRVD   88 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHC-CCCC
Confidence            568899998 59999999998888999 5777777765543 445555332 12211 22233444444443322 4799


Q ss_pred             EEEEccCC
Q 018075          254 VSFDCVGF  261 (361)
Q Consensus       254 ~vld~~g~  261 (361)
                      +++++.|.
T Consensus        89 ~li~~Ag~   96 (265)
T 2o23_A           89 VAVNCAGI   96 (265)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99998873

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=95.92  E-value=0.03  Score=48.00  Aligned_cols=82  Identities=20%  Similarity=0.257  Sum_probs=54.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HHHcCCCE-EeecC-CCccchhHHHHHHHhhcCCCcc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+. .++++... .+..+ .+..+..+.+.++.+.. .++|
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id   85 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGA-KVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKF-GKVD   85 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHH-SCCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhc-CCCC
Confidence            468899998 58999999998888999 68888888877654 44455332 12111 22334444444443322 3799


Q ss_pred             EEEEccCC
Q 018075          254 VSFDCVGF  261 (361)
Q Consensus       254 ~vld~~g~  261 (361)
                      +++++.|.
T Consensus        86 ~li~~Ag~   93 (261)
T 3n74_A           86 ILVNNAGI   93 (261)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99998873

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=95.92  E-value=0.066  Score=45.56  Aligned_cols=82  Identities=29%  Similarity=0.402  Sum_probs=52.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHc---CCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---GADE-TAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.++++.++.+.+ +++   +... .+..+ .+..+..+.+.++.+.. +
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-g   83 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGA-AVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEAL-G   83 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-C
Confidence            467899998 59999999998888999 688888887765432 222   4321 12211 22233444444433222 4


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|+++++.|.
T Consensus        84 ~id~lv~nAg~   94 (247)
T 2jah_A           84 GLDILVNNAGI   94 (247)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}

Probab=95.92  E-value=0.077  Score=47.35  Aligned_cols=129  Identities=18%  Similarity=0.238  Sum_probs=80.6

Q ss_pred             EEEEECCCHHHHHHHHHHHHc-CCCEEEEEeCChhHHH-HHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEc
Q 018075          181 NVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  258 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~-g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  258 (361)
                      +|.|+|+|.+|...+..++.. +++.+.+.+.++++.+ +++++|..    +    .++.+.+.      ...+|+|+.|
T Consensus         5 ~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~----~----~~~~~~l~------~~~~D~V~i~   70 (331)
T 4hkt_A            5 RFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE----V----RTIDAIEA------AADIDAVVIC   70 (331)
T ss_dssp             EEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE----E----CCHHHHHH------CTTCCEEEEC
T ss_pred             EEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC----c----CCHHHHhc------CCCCCEEEEe
Confidence            688999999998877766665 6744445677777754 55667764    2    23333321      3479999999


Q ss_pred             cCChHHHHHHHHhhcCCCEEEEEccCCCCcceech---H-hhhcCcEEE-Eeec-CCCcHHHHHHHHHcCCC
Q 018075          259 VGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT---P-AAAREVDVI-GIFR-YRSTWPLCIEFLRSGKI  324 (361)
Q Consensus       259 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~-~~~~~~~i~-~~~~-~~~~~~~~~~~l~~g~~  324 (361)
                      +....+.+.+..+|..|-. +.+.-+.....-...   . .-.++..+. +... +...++.+.+++++|.+
T Consensus        71 tp~~~h~~~~~~al~~gk~-v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~~~~i~~g~i  141 (331)
T 4hkt_A           71 TPTDTHADLIERFARAGKA-IFCEKPIDLDAERVRACLKVVSDTKAKLMVGFNRRFDPHFMAVRKAIDDGRI  141 (331)
T ss_dssp             SCGGGHHHHHHHHHHTTCE-EEECSCSCSSHHHHHHHHHHHHHTTCCEEECCGGGGCHHHHHHHHHHHTTTT
T ss_pred             CCchhHHHHHHHHHHcCCc-EEEecCCCCCHHHHHHHHHHHHHcCCeEEEcccccCCHHHHHHHHHHHcCCC
Confidence            9988888888888888755 445433211111111   1 122333333 2222 25678889999999888

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=95.92  E-value=0.021  Score=51.69  Aligned_cols=49  Identities=24%  Similarity=0.298  Sum_probs=41.4

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCC
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGAD  225 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~  225 (361)
                      --+|.+|+|+|.|.+|..+++.+...|+ .|++.+.+.++.+ +++++++.
T Consensus       170 ~L~GktV~V~G~G~VG~~~A~~L~~~Ga-kVvv~D~~~~~l~~~a~~~ga~  219 (364)
T 1leh_A          170 SLEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVAEEGAD  219 (364)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCCE
T ss_pred             CCCcCEEEEECchHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCE
Confidence            3578999999999999999999999999 6778898888765 56667754

>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}

Probab=95.92  E-value=0.034  Score=51.01  Aligned_cols=98  Identities=20%  Similarity=0.139  Sum_probs=64.6

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhhcCCC
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (361)
                      +++|++||=+|||. |..++.+++ .|+. |+++|.++...+.+++    .|...-+.    ..+..+.+...    ...
T Consensus       212 ~~~g~~VLDlg~Gt-G~~sl~~a~-~ga~-V~avDis~~al~~a~~n~~~ng~~~~~~----~~D~~~~l~~~----~~~  280 (393)
T 4dmg_A          212 VRPGERVLDVYSYV-GGFALRAAR-KGAY-ALAVDKDLEALGVLDQAALRLGLRVDIR----HGEALPTLRGL----EGP  280 (393)
T ss_dssp             CCTTCEEEEESCTT-THHHHHHHH-TTCE-EEEEESCHHHHHHHHHHHHHHTCCCEEE----ESCHHHHHHTC----CCC
T ss_pred             hcCCCeEEEcccch-hHHHHHHHH-cCCe-EEEEECCHHHHHHHHHHHHHhCCCCcEE----EccHHHHHHHh----cCC
Confidence            46799999998754 556666666 4885 9999999998877765    34432111    13443333222    233


Q ss_pred             ccEEEEccCC---------------hHHHHHHHHhhcCCCEEEEEccC
Q 018075          252 IDVSFDCVGF---------------DKTMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       252 ~d~vld~~g~---------------~~~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      ||+|+-....               ...+..+.+.|+|||.++.+...
T Consensus       281 fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s  328 (393)
T 4dmg_A          281 FHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCS  328 (393)
T ss_dssp             EEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred             CCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence            9999875442               13677788999999999866543

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=95.90  E-value=0.058  Score=47.02  Aligned_cols=82  Identities=20%  Similarity=0.261  Sum_probs=53.1

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HHHc---CCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNL---GADE-TAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~l---g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      ++.++||.| +|++|.+.++.+...|+ .|+.++++.++.+. ++++   +... .+..+ .+..+..+.+.++.+.. +
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g  104 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGV-TVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKF-G  104 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-C
Confidence            568899998 59999999998888999 68888888776543 3333   2221 12111 22234444444443322 4


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|+++++.|.
T Consensus       105 ~iD~lVnnAg~  115 (283)
T 3v8b_A          105 HLDIVVANAGI  115 (283)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999998874

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=95.90  E-value=0.055  Score=46.13  Aligned_cols=82  Identities=18%  Similarity=0.327  Sum_probs=52.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHc---CCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---GADE-TAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.++++.++.+.+ +++   +... .+..+ .+..+..+.+.++.+.. .
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g   85 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEF-G   85 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence            578899998 59999999998888999 688888888765433 222   3221 11111 22233444444443322 4


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|+++++.|.
T Consensus        86 ~id~li~~Ag~   96 (253)
T 3qiv_A           86 GIDYLVNNAAI   96 (253)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999999875

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=95.89  E-value=0.038  Score=46.79  Aligned_cols=78  Identities=18%  Similarity=0.124  Sum_probs=49.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHH-HcCCCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      ++.++||.| +|.+|.+.++.+...|+ .|+.++++.++.+.+. ++.-...+..+-  .+. +.+.++.+ .-.++|++
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~--~~~-~~~~~~~~-~~~~id~v   80 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGIEPVCVDL--GDW-DATEKALG-GIGPVDLL   80 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCT--TCH-HHHHHHHT-TCCCCSEE
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCCCcEEecC--CCH-HHHHHHHH-HcCCCCEE
Confidence            567899998 59999999998888999 6888888877655433 332112222211  222 12222222 12469999


Q ss_pred             EEccC
Q 018075          256 FDCVG  260 (361)
Q Consensus       256 ld~~g  260 (361)
                      +++.|
T Consensus        81 i~~Ag   85 (244)
T 1cyd_A           81 VNNAA   85 (244)
T ss_dssp             EECCC
T ss_pred             EECCc
Confidence            99987

>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}

Probab=95.89  E-value=0.045  Score=45.21  Aligned_cols=101  Identities=19%  Similarity=0.237  Sum_probs=66.9

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc----CCC-EEeecCCCccchhHHHHHHHh
Q 018075          172 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GAD-ETAKVSTDIEDVDTDVGKIQN  246 (361)
Q Consensus       172 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~-~~~~~~~~~~~~~~~~~~~~~  246 (361)
                      +....+++ +||-+|||. |..+..+++..+. .+++++.+++..+.+++.    +.. .+.....+..+..     +  
T Consensus        38 ~~~~~~~~-~vLdiG~G~-G~~~~~l~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-----~--  107 (219)
T 3dlc_A           38 NRFGITAG-TCIDIGSGP-GALSIALAKQSDF-SIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIP-----I--  107 (219)
T ss_dssp             HHHCCCEE-EEEEETCTT-SHHHHHHHHHSEE-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCS-----S--
T ss_pred             HhcCCCCC-EEEEECCCC-CHHHHHHHHcCCC-eEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCC-----C--
Confidence            44556666 999999876 7788888888666 799999999887776654    322 1111111111110     1  


Q ss_pred             hcCCCccEEEEccCC------hHHHHHHHHhhcCCCEEEEEcc
Q 018075          247 AMGSGIDVSFDCVGF------DKTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       247 ~~~~~~d~vld~~g~------~~~~~~~~~~l~~~G~~v~~g~  283 (361)
                       ....+|+|+....-      ...++.+.+.|+|||+++....
T Consensus       108 -~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~  149 (219)
T 3dlc_A          108 -EDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGG  149 (219)
T ss_dssp             -CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             -CcccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEec
Confidence             13579999975421      3478889999999999988653

>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*

Probab=95.88  E-value=0.089  Score=47.42  Aligned_cols=131  Identities=16%  Similarity=0.096  Sum_probs=81.8

Q ss_pred             CEEEEECCCHHHH-HHHHHHHHc-CCCEEEEEeCChhHHH-HHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075          180 TNVMIMGSGPIGL-VTLLAARAF-GAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  256 (361)
Q Consensus       180 ~~vlI~G~g~~G~-~ai~la~~~-g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  256 (361)
                      -++.|+|+|.+|. ..+..++.. +++.+.+++.++++.+ +++++|+...       .++.+.+.      ...+|+|+
T Consensus        28 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~-------~~~~~ll~------~~~~D~V~   94 (350)
T 3rc1_A           28 IRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPV-------EGYPALLE------RDDVDAVY   94 (350)
T ss_dssp             EEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEE-------ESHHHHHT------CTTCSEEE
T ss_pred             eEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCc-------CCHHHHhc------CCCCCEEE
Confidence            4789999999997 555655555 7754456677776654 5566786542       13333221      35799999


Q ss_pred             EccCChHHHHHHHHhhcCCCEEEEEccCCCCcceech---H-hhhcCcEE-EEeec-CCCcHHHHHHHHHcCCC
Q 018075          257 DCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT---P-AAAREVDV-IGIFR-YRSTWPLCIEFLRSGKI  324 (361)
Q Consensus       257 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~-~~~~~~~i-~~~~~-~~~~~~~~~~~l~~g~~  324 (361)
                      .|+....+.+.+..+|..|-. |++.-+.....-...   . .-.+++.+ .+... +...++.+.+++++|.+
T Consensus        95 i~tp~~~h~~~~~~al~aGk~-Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~i  167 (350)
T 3rc1_A           95 VPLPAVLHAEWIDRALRAGKH-VLAEKPLTTDRPQAERLFAVARERGLLLMENFMFLHHPQHRQVADMLDEGVI  167 (350)
T ss_dssp             ECCCGGGHHHHHHHHHHTTCE-EEEESSSCSSHHHHHHHHHHHHHTTCCEEEECGGGGCTHHHHHHHHHHTTTT
T ss_pred             ECCCcHHHHHHHHHHHHCCCc-EEEeCCCCCCHHHHHHHHHHHHHhCCEEEEEecccCCHHHHHHHHHHhcCCC
Confidence            999988888888888887765 455433221111111   1 12233333 33322 36778899999999887

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=95.88  E-value=0.053  Score=46.34  Aligned_cols=81  Identities=26%  Similarity=0.426  Sum_probs=50.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HH---HcCCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-AR---NLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~---~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+. .+   +.+... .+..+ .+..++.+.+.++.+.. .
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~   89 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGA-RVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQE-G   89 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc-C
Confidence            478899998 59999999998888999 68888888765432 22   224321 12211 22223333444333222 4


Q ss_pred             CccEEEEccC
Q 018075          251 GIDVSFDCVG  260 (361)
Q Consensus       251 ~~d~vld~~g  260 (361)
                      ++|+++++.|
T Consensus        90 ~id~vi~~Ag   99 (260)
T 3awd_A           90 RVDILVACAG   99 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999887

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=95.88  E-value=0.058  Score=48.79  Aligned_cols=90  Identities=20%  Similarity=0.262  Sum_probs=64.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      .|.+|.|+|.|.+|...++.++.+|. .|++.+.+. +.+.+.+.|+..        .++.+.+        ...|+|+-
T Consensus       175 ~gktvGIIGlG~IG~~vA~~l~~fG~-~V~~~d~~~-~~~~~~~~g~~~--------~~l~ell--------~~aDvV~l  236 (365)
T 4hy3_A          175 AGSEIGIVGFGDLGKALRRVLSGFRA-RIRVFDPWL-PRSMLEENGVEP--------ASLEDVL--------TKSDFIFV  236 (365)
T ss_dssp             SSSEEEEECCSHHHHHHHHHHTTSCC-EEEEECSSS-CHHHHHHTTCEE--------CCHHHHH--------HSCSEEEE
T ss_pred             CCCEEEEecCCcccHHHHHhhhhCCC-EEEEECCCC-CHHHHhhcCeee--------CCHHHHH--------hcCCEEEE
Confidence            37899999999999999999999999 688888765 344555667542        1222222        36899998


Q ss_pred             ccCChH-----HHHHHHHhhcCCCEEEEEccCC
Q 018075          258 CVGFDK-----TMSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       258 ~~g~~~-----~~~~~~~~l~~~G~~v~~g~~~  285 (361)
                      ++....     .-...+..|++++.++-++...
T Consensus       237 ~~Plt~~T~~li~~~~l~~mk~gailIN~aRG~  269 (365)
T 4hy3_A          237 VAAVTSENKRFLGAEAFSSMRRGAAFILLSRAD  269 (365)
T ss_dssp             CSCSSCC---CCCHHHHHTSCTTCEEEECSCGG
T ss_pred             cCcCCHHHHhhcCHHHHhcCCCCcEEEECcCCc
Confidence            765331     1246778899999888876554

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=95.87  E-value=0.019  Score=49.07  Aligned_cols=85  Identities=14%  Similarity=0.128  Sum_probs=47.6

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHH---HcCCCE-EeecC-CCccchhHHHHHHHhh--
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IAR---NLGADE-TAKVS-TDIEDVDTDVGKIQNA--  247 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~---~lg~~~-~~~~~-~~~~~~~~~~~~~~~~--  247 (361)
                      -++.++||.| ++++|.+.++.+...|++.++...++.++.+ .++   +.+... .+..+ .+..+......++.+.  
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   84 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhc
Confidence            3578899998 5999999999888899953343455554433 222   233221 11111 1222233333333221  


Q ss_pred             ---cCCCccEEEEccCC
Q 018075          248 ---MGSGIDVSFDCVGF  261 (361)
Q Consensus       248 ---~~~~~d~vld~~g~  261 (361)
                         ...++|+++++.|.
T Consensus        85 ~~~~~~~id~lv~nAg~  101 (255)
T 3icc_A           85 NRTGSTKFDILINNAGI  101 (255)
T ss_dssp             HHHSSSCEEEEEECCCC
T ss_pred             ccccCCcccEEEECCCC
Confidence               12359999998874

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=95.86  E-value=0.042  Score=47.17  Aligned_cols=82  Identities=15%  Similarity=0.191  Sum_probs=51.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HHH---cCCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARN---LGADE-TAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~---lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+. .++   .+... .+..+ .+..+....+.++.+.. +
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g   90 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGA-HVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLH-G   90 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence            578899998 69999999998888999 68888888765532 222   24321 11111 22223333343333222 4


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|+++++.|.
T Consensus        91 ~iD~lv~~Ag~  101 (260)
T 2zat_A           91 GVDILVSNAAV  101 (260)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A

Probab=95.86  E-value=0.04  Score=45.78  Aligned_cols=99  Identities=13%  Similarity=0.081  Sum_probs=63.2

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc-C---CC-----EEeecCCCccchhHHHHHH
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL-G---AD-----ETAKVSTDIEDVDTDVGKI  244 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l-g---~~-----~~~~~~~~~~~~~~~~~~~  244 (361)
                      ....++.+||-+|||. |..+..+++..+...+++++.+++..+.+++. .   ..     .+.....   +...    .
T Consensus        25 l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~---d~~~----~   96 (217)
T 3jwh_A           25 LKQSNARRVIDLGCGQ-GNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQG---ALTY----Q   96 (217)
T ss_dssp             HHHTTCCEEEEETCTT-CHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEEC---CTTS----C
T ss_pred             HHhcCCCEEEEeCCCC-CHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeC---Cccc----c
Confidence            4446788999999876 77788888866645899999999988877663 1   11     1111111   1100    0


Q ss_pred             HhhcCCCccEEEEcc-----CC---hHHHHHHHHhhcCCCEEEEE
Q 018075          245 QNAMGSGIDVSFDCV-----GF---DKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       245 ~~~~~~~~d~vld~~-----g~---~~~~~~~~~~l~~~G~~v~~  281 (361)
                       ......||+|+...     ..   ...++.+.+.|+|||.++..
T Consensus        97 -~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~  140 (217)
T 3jwh_A           97 -DKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTT  140 (217)
T ss_dssp             -CGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred             -cccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEc
Confidence             01135799998633     21   23677888899999977654

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=95.86  E-value=0.088  Score=45.63  Aligned_cols=82  Identities=16%  Similarity=0.261  Sum_probs=52.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HHHc---CCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNL---GADE-TAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~l---g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      ++.++||.| +|++|.+.++.+...|+ .|+.+++++++.+. ++++   +... .+..+ .+..+..+.+.++.+. -+
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-~g   98 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVER-YG   98 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-TC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH-hC
Confidence            467899998 59999999998888999 68888888766543 2222   4322 12111 2223344444444332 24


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|+++++.|.
T Consensus        99 ~iD~lv~~Ag~  109 (277)
T 2rhc_B           99 PVDVLVNNAGR  109 (277)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=95.86  E-value=0.067  Score=45.40  Aligned_cols=82  Identities=21%  Similarity=0.266  Sum_probs=52.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH----HHcCCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.++++.++.+.+    ++.+... .+..+ .+..+..+.+.++.+ ...
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~~   81 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKA-ENL   81 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH-TTC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH-HcC
Confidence            467899998 59999999998888999 688888887765433    2234322 12111 222334444444433 235


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|+++++.|.
T Consensus        82 ~id~li~~Ag~   92 (247)
T 3lyl_A           82 AIDILVNNAGI   92 (247)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=95.86  E-value=0.015  Score=48.69  Aligned_cols=87  Identities=14%  Similarity=0.139  Sum_probs=56.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  256 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  256 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.++++.+             .+. .+..+..+.+.++     .++|+++
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~-------------~D~-~~~~~v~~~~~~~-----g~id~lv   64 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHT-IVHVASRQTG-------------LDI-SDEKSVYHYFETI-----GAFDHLI   64 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTE-EEEEESGGGT-------------CCT-TCHHHHHHHHHHH-----CSEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEecCCcc-------------cCC-CCHHHHHHHHHHh-----CCCCEEE
Confidence            467889998 59999999998888899 6777776654             122 2222333333322     4689999


Q ss_pred             EccCCh-----------H---------------HHHHHHHhhcCCCEEEEEccC
Q 018075          257 DCVGFD-----------K---------------TMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       257 d~~g~~-----------~---------------~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      ++.|..           +               ..+.+.+.+.++|+++.++..
T Consensus        65 ~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~  118 (223)
T 3uce_A           65 VTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGM  118 (223)
T ss_dssp             ECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCG
T ss_pred             ECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecch
Confidence            887732           1               233344556668999988743

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=95.85  E-value=0.069  Score=46.32  Aligned_cols=82  Identities=18%  Similarity=0.227  Sum_probs=51.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HHHcCC--C-EEeecC-CCccchhHHHHHHHhhcCCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLGA--D-ETAKVS-TDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~--~-~~~~~~-~~~~~~~~~~~~~~~~~~~~  251 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+. ++++..  . ..+..+ .+..+..+.+.++.+. -++
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g~  105 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGA-RVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGEL-SAR  105 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHH-CSC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHh-cCC
Confidence            468899998 59999999998888999 68888888776543 333321  1 111111 1222333344433322 347


Q ss_pred             ccEEEEccCC
Q 018075          252 IDVSFDCVGF  261 (361)
Q Consensus       252 ~d~vld~~g~  261 (361)
                      +|+++++.|.
T Consensus       106 iD~lvnnAg~  115 (276)
T 2b4q_A          106 LDILVNNAGT  115 (276)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=95.85  E-value=0.037  Score=47.51  Aligned_cols=82  Identities=17%  Similarity=0.203  Sum_probs=51.1

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHc---CCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---GADE-TAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ +++   +... .+..+ .+..+....+.++.+...+
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g   82 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGA-TVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQG   82 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            467899998 59999999998888999 678888887665432 222   4221 11111 2223333444443321135


Q ss_pred             CccEEEEccC
Q 018075          251 GIDVSFDCVG  260 (361)
Q Consensus       251 ~~d~vld~~g  260 (361)
                      ++|+++++.|
T Consensus        83 ~id~lvnnAg   92 (260)
T 2qq5_A           83 RLDVLVNNAY   92 (260)
T ss_dssp             CCCEEEECCC
T ss_pred             CceEEEECCc
Confidence            7999999984

>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}

Probab=95.84  E-value=0.035  Score=47.06  Aligned_cols=106  Identities=19%  Similarity=0.118  Sum_probs=67.8

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCC-CEEeecCCCccchhHHHHHHHhhcCCCc
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA-DETAKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      ..++++.+||-+|||. |..+..+++...  .|++++.++...+.+++... ..+.....+..+.... ..+.  .+..+
T Consensus        52 ~~~~~~~~vLD~GcG~-G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~-~~~~--~~~~~  125 (245)
T 3ggd_A           52 LLFNPELPLIDFACGN-GTQTKFLSQFFP--RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQA-AQIH--SEIGD  125 (245)
T ss_dssp             TTSCTTSCEEEETCTT-SHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHH-HHHH--HHHCS
T ss_pred             hccCCCCeEEEEcCCC-CHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCcccCceEEECcccccccc-cccc--cccCc
Confidence            3478899999999885 888888888644  69999999998888877432 1111111221222111 1111  12358


Q ss_pred             cEEEEcc-----C---ChHHHHHHHHhhcCCCEEEEEccCC
Q 018075          253 DVSFDCV-----G---FDKTMSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       253 d~vld~~-----g---~~~~~~~~~~~l~~~G~~v~~g~~~  285 (361)
                      |+|+...     .   -...++.+.+.|+|||+++++....
T Consensus       126 d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~  166 (245)
T 3ggd_A          126 ANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGT  166 (245)
T ss_dssp             CEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECT
T ss_pred             cEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCc
Confidence            9998743     1   1247888899999999988776543

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=95.84  E-value=0.15  Score=45.25  Aligned_cols=83  Identities=18%  Similarity=0.232  Sum_probs=50.9

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCC------------hhHHH----HHHHcCCCEE-eecC-CCccch
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVD------------VQRLS----IARNLGADET-AKVS-TDIEDV  237 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~------------~~~~~----~~~~lg~~~~-~~~~-~~~~~~  237 (361)
                      -.|.++||.| +|++|.+.++.+...|+ .|+.++++            .++.+    .+++.+.... +..+ .+..+.
T Consensus        44 l~gk~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v  122 (317)
T 3oec_A           44 LQGKVAFITGAARGQGRTHAVRLAQDGA-DIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASL  122 (317)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCC-eEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            4678999998 59999999998888999 57777654            33322    2233443321 1111 222344


Q ss_pred             hHHHHHHHhhcCCCccEEEEccCC
Q 018075          238 DTDVGKIQNAMGSGIDVSFDCVGF  261 (361)
Q Consensus       238 ~~~~~~~~~~~~~~~d~vld~~g~  261 (361)
                      .+.+.++.+.. +++|+++++.|.
T Consensus       123 ~~~~~~~~~~~-g~iD~lVnnAg~  145 (317)
T 3oec_A          123 QAVVDEALAEF-GHIDILVSNVGI  145 (317)
T ss_dssp             HHHHHHHHHHH-SCCCEEEECCCC
T ss_pred             HHHHHHHHHHc-CCCCEEEECCCC
Confidence            44444443322 479999999874

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=95.84  E-value=0.13  Score=44.88  Aligned_cols=83  Identities=20%  Similarity=0.305  Sum_probs=50.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCC--CEEEEEeCChhHHHHHH-Hc-----CCCE-EeecC-CCccchhHHHHHHHh
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGA--PRIIITDVDVQRLSIAR-NL-----GADE-TAKVS-TDIEDVDTDVGKIQN  246 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~--~~vv~v~~~~~~~~~~~-~l-----g~~~-~~~~~-~~~~~~~~~~~~~~~  246 (361)
                      .|.++||.| +|++|.+.+..+...|+  ..|+.++++.++.+.+. ++     +... .+..+ .+.++..+.+.++.+
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  111 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ  111 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            468999998 59999998876666665  26788888877654432 22     3221 11111 233344444443322


Q ss_pred             hcCCCccEEEEccCC
Q 018075          247 AMGSGIDVSFDCVGF  261 (361)
Q Consensus       247 ~~~~~~d~vld~~g~  261 (361)
                      . -+++|+++++.|.
T Consensus       112 ~-~g~iD~lVnnAG~  125 (287)
T 3rku_A          112 E-FKDIDILVNNAGK  125 (287)
T ss_dssp             G-GCSCCEEEECCCC
T ss_pred             h-cCCCCEEEECCCc
Confidence            1 2479999998873

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=95.84  E-value=0.041  Score=46.90  Aligned_cols=81  Identities=25%  Similarity=0.332  Sum_probs=52.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HHHcCCCE--EeecC-CCccchhHHHHHHHhhcCCCc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLGADE--TAKVS-TDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.++++.++.+. .++++...  .+..+ .+..+..+...++..  -.++
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~~~i   86 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGA-RLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEA--VAPV   86 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHH--HSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHh--hCCC
Confidence            567899998 59999999998888999 68888888776543 34444322  12211 222233333433332  2479


Q ss_pred             cEEEEccCC
Q 018075          253 DVSFDCVGF  261 (361)
Q Consensus       253 d~vld~~g~  261 (361)
                      |+++++.|.
T Consensus        87 d~li~~Ag~   95 (254)
T 2wsb_A           87 SILVNSAGI   95 (254)
T ss_dssp             CEEEECCCC
T ss_pred             cEEEECCcc
Confidence            999998874

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=95.83  E-value=0.034  Score=47.29  Aligned_cols=79  Identities=22%  Similarity=0.339  Sum_probs=49.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  256 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  256 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+.++.-...+..+-  .+.. .+.++.+. -.++|+++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~--~~~~-~~~~~~~~-~~~id~lv   79 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRVLDV--TKKK-QIDQFANE-VERLDVLF   79 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCT--TCHH-HHHHHHHH-CSCCSEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhccCceEEEeeC--CCHH-HHHHHHHH-hCCCCEEE
Confidence            467899998 59999999998888999 6888888877665433332111222111  1211 22222221 24799999


Q ss_pred             EccCC
Q 018075          257 DCVGF  261 (361)
Q Consensus       257 d~~g~  261 (361)
                      ++.|.
T Consensus        80 ~~Ag~   84 (246)
T 2ag5_A           80 NVAGF   84 (246)
T ss_dssp             ECCCC
T ss_pred             ECCcc
Confidence            98873

>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A

Probab=95.83  E-value=0.011  Score=51.07  Aligned_cols=91  Identities=12%  Similarity=0.035  Sum_probs=62.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCC--------CEEeecCCCccchhHHHHHHHhhc
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA--------DETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~--------~~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      ..+++||++|+|. |..+..+++. + ..+++++.+++-.+.+++.-.        ..+....   .+..+.       .
T Consensus        71 ~~~~~VL~iG~G~-G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~---~D~~~~-------~  137 (262)
T 2cmg_A           71 KELKEVLIVDGFD-LELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAK---QLLDLD-------I  137 (262)
T ss_dssp             SCCCEEEEESSCC-HHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEES---SGGGSC-------C
T ss_pred             CCCCEEEEEeCCc-CHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEe---chHHHH-------H
Confidence            4568999999876 7778888887 7 689999999987777765311        1111111   111110       0


Q ss_pred             CCCccEEEEccCChH-HHHHHHHhhcCCCEEEEE
Q 018075          249 GSGIDVSFDCVGFDK-TMSTALNATRPGGKVCLI  281 (361)
Q Consensus       249 ~~~~d~vld~~g~~~-~~~~~~~~l~~~G~~v~~  281 (361)
                       ..||+|+-....+. .++.+.+.|+|+|.++..
T Consensus       138 -~~fD~Ii~d~~dp~~~~~~~~~~L~pgG~lv~~  170 (262)
T 2cmg_A          138 -KKYDLIFCLQEPDIHRIDGLKRMLKEDGVFISV  170 (262)
T ss_dssp             -CCEEEEEESSCCCHHHHHHHHTTEEEEEEEEEE
T ss_pred             -hhCCEEEECCCChHHHHHHHHHhcCCCcEEEEE
Confidence             46999987654443 488899999999999875

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=95.83  E-value=0.053  Score=46.99  Aligned_cols=81  Identities=21%  Similarity=0.237  Sum_probs=48.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH----HHHcCCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI----ARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~----~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      .+.++||.| +|++|.+.+..+...|+ .|+.++++.++.+.    +++.+... .+..+ .+..++.+.+.++.+.. +
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-g  110 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGA-DVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDF-G  110 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTC-EEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHh-C
Confidence            467899998 59999999988877899 57777776654332    22234321 22211 22233334444333222 4


Q ss_pred             CccEEEEccC
Q 018075          251 GIDVSFDCVG  260 (361)
Q Consensus       251 ~~d~vld~~g  260 (361)
                      ++|+++++.|
T Consensus       111 ~id~li~~Ag  120 (279)
T 3ctm_A          111 TIDVFVANAG  120 (279)
T ss_dssp             CCSEEEECGG
T ss_pred             CCCEEEECCc
Confidence            6999999876

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=95.83  E-value=0.11  Score=45.21  Aligned_cols=81  Identities=21%  Similarity=0.287  Sum_probs=51.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhH-----------HHHHHHcCCCE-Ee--ecCCCccchhHHHH
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQR-----------LSIARNLGADE-TA--KVSTDIEDVDTDVG  242 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~-----------~~~~~~lg~~~-~~--~~~~~~~~~~~~~~  242 (361)
                      .+.++||.| ++++|.+.++.+...|+ .|+.++++.++           .+.+++.+... .+  ++ ++..+..+.+.
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~   85 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGA-NVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDI-RDGDAVAAAVA   85 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCT-TSHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCC-CCHHHHHHHHH
Confidence            578899998 59999999998888999 67777776542           22333344322 11  22 23334444444


Q ss_pred             HHHhhcCCCccEEEEccCC
Q 018075          243 KIQNAMGSGIDVSFDCVGF  261 (361)
Q Consensus       243 ~~~~~~~~~~d~vld~~g~  261 (361)
                      ++.+.. +++|+++++.|.
T Consensus        86 ~~~~~~-g~id~lvnnAg~  103 (285)
T 3sc4_A           86 KTVEQF-GGIDICVNNASA  103 (285)
T ss_dssp             HHHHHH-SCCSEEEECCCC
T ss_pred             HHHHHc-CCCCEEEECCCC
Confidence            444322 479999999874

>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}

Probab=95.82  E-value=0.099  Score=42.11  Aligned_cols=94  Identities=13%  Similarity=0.128  Sum_probs=64.2

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCC-EEeecCCCccchhHHHHHHHhhcCCCccE
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD-ETAKVSTDIEDVDTDVGKIQNAMGSGIDV  254 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  254 (361)
                      ++++.+||-+|+|. |..+..+++. +. .+++++.+++..+.+++.... ..+..+.  .+..     +   ....+|+
T Consensus        44 ~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~~D~~~~~~~~a~~~~~~~~~~~~d~--~~~~-----~---~~~~~D~  110 (195)
T 3cgg_A           44 APRGAKILDAGCGQ-GRIGGYLSKQ-GH-DVLGTDLDPILIDYAKQDFPEARWVVGDL--SVDQ-----I---SETDFDL  110 (195)
T ss_dssp             SCTTCEEEEETCTT-THHHHHHHHT-TC-EEEEEESCHHHHHHHHHHCTTSEEEECCT--TTSC-----C---CCCCEEE
T ss_pred             ccCCCeEEEECCCC-CHHHHHHHHC-CC-cEEEEcCCHHHHHHHHHhCCCCcEEEccc--ccCC-----C---CCCceeE
Confidence            57899999999875 7777777776 76 799999999988888775422 2222111  1110     1   1357999


Q ss_pred             EEEccCC---------hHHHHHHHHhhcCCCEEEEEc
Q 018075          255 SFDCVGF---------DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       255 vld~~g~---------~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      |+.....         ...+..+.+.|+++|+++...
T Consensus       111 i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~  147 (195)
T 3cgg_A          111 IVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGF  147 (195)
T ss_dssp             EEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEe
Confidence            9975211         236777889999999998753

>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*

Probab=95.81  E-value=0.074  Score=47.97  Aligned_cols=131  Identities=13%  Similarity=0.088  Sum_probs=81.3

Q ss_pred             CEEEEECCCHHHHHHHHHHHHc--CCCEEEEEeCChhHHH-HHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075          180 TNVMIMGSGPIGLVTLLAARAF--GAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  256 (361)
Q Consensus       180 ~~vlI~G~g~~G~~ai~la~~~--g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  256 (361)
                      -+|.|+|+|.+|...+..++..  +++.+.+.+.++++.+ +++++|+. .  +    .++.+.+.      ...+|+|+
T Consensus        14 ~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~~-~--~----~~~~~ll~------~~~~D~V~   80 (354)
T 3q2i_A           14 IRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGAR-G--H----ASLTDMLA------QTDADIVI   80 (354)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCCE-E--E----SCHHHHHH------HCCCSEEE
T ss_pred             ceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCCc-e--e----CCHHHHhc------CCCCCEEE
Confidence            4789999999998777766655  6744556678877754 55667862 2  2    23333332      24799999


Q ss_pred             EccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechH----hhhcCcEE-EEeec-CCCcHHHHHHHHHcCCC
Q 018075          257 DCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTP----AAAREVDV-IGIFR-YRSTWPLCIEFLRSGKI  324 (361)
Q Consensus       257 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~----~~~~~~~i-~~~~~-~~~~~~~~~~~l~~g~~  324 (361)
                      .|+....+.+.+..+|..|-.+ .+.-+.....-....    .-..+..+ .+... +...++.+.+++++|.+
T Consensus        81 i~tp~~~h~~~~~~al~~gk~v-~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~i  153 (354)
T 3q2i_A           81 LTTPSGLHPTQSIECSEAGFHV-MTEKPMATRWEDGLEMVKAADKAKKHLFVVKQNRRNATLQLLKRAMQEKRF  153 (354)
T ss_dssp             ECSCGGGHHHHHHHHHHTTCEE-EECSSSCSSHHHHHHHHHHHHHHTCCEEECCGGGGSHHHHHHHHHHHTTTT
T ss_pred             ECCCcHHHHHHHHHHHHCCCCE-EEeCCCcCCHHHHHHHHHHHHHhCCeEEEEEcccCCHHHHHHHHHHhcCCC
Confidence            9999888888888888877554 444322111111111    12223333 33332 25578889999999988

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=95.80  E-value=0.032  Score=48.38  Aligned_cols=102  Identities=15%  Similarity=0.241  Sum_probs=62.9

Q ss_pred             HHHHhcCC-CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHH-HHHHHcCCCEEeecCCCccchhHHHHHHHh
Q 018075          169 HACRRANV-GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRL-SIARNLGADETAKVSTDIEDVDTDVGKIQN  246 (361)
Q Consensus       169 ~~l~~~~~-~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~-~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~  246 (361)
                      .+++...+ -++.+++|+|+|++|.+++..+...|+ .|++++++.++. +++++++....+...    ++.    ++..
T Consensus       108 ~~L~~~~~~l~~k~vlViGaGg~g~a~a~~L~~~G~-~V~v~~R~~~~~~~la~~~~~~~~~~~~----~~~----~~~~  178 (271)
T 1nyt_A          108 SDLERLSFIRPGLRILLIGAGGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTGSIQAL----SMD----ELEG  178 (271)
T ss_dssp             HHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGSSEEEC----CSG----GGTT
T ss_pred             HHHHhcCcCcCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHhhccCCeeEe----cHH----Hhcc
Confidence            34444222 368899999999999999999999996 788888888775 455666531101111    111    1111


Q ss_pred             hcCCCccEEEEccCChHHHHH----HHHhhcCCCEEEEEcc
Q 018075          247 AMGSGIDVSFDCVGFDKTMST----ALNATRPGGKVCLIGL  283 (361)
Q Consensus       247 ~~~~~~d~vld~~g~~~~~~~----~~~~l~~~G~~v~~g~  283 (361)
                         .++|+++++++.... ..    ....+.++..++.+..
T Consensus       179 ---~~~DivVn~t~~~~~-~~~~~i~~~~l~~~~~v~D~~y  215 (271)
T 1nyt_A          179 ---HEFDLIINATSSGIS-GDIPAIPSSLIHPGIYCYDMFY  215 (271)
T ss_dssp             ---CCCSEEEECCSCGGG-TCCCCCCGGGCCTTCEEEESCC
T ss_pred             ---CCCCEEEECCCCCCC-CCCCCCCHHHcCCCCEEEEecc
Confidence               579999999986522 10    1123455555555544

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=95.80  E-value=0.078  Score=45.51  Aligned_cols=82  Identities=29%  Similarity=0.396  Sum_probs=52.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHc----CCCE-EeecC-CCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL----GADE-TAKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l----g~~~-~~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      ++.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ +++    +... .+..+ .+..+..+.+.++.+.. 
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   83 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGA-HIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSF-   83 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            467899998 59999999998888999 688888887765432 222    4321 11111 22233444444433322 


Q ss_pred             CCccEEEEccCC
Q 018075          250 SGIDVSFDCVGF  261 (361)
Q Consensus       250 ~~~d~vld~~g~  261 (361)
                      +++|+++++.|.
T Consensus        84 g~id~lv~~Ag~   95 (263)
T 3ai3_A           84 GGADILVNNAGT   95 (263)
T ss_dssp             SSCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999873

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=95.79  E-value=0.12  Score=45.74  Aligned_cols=88  Identities=10%  Similarity=0.072  Sum_probs=62.1

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEc
Q 018075          179 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  258 (361)
Q Consensus       179 g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  258 (361)
                      -.+|.|+|+|.+|...++.+...|. .|++.++++++.+.+.+.|+...       .+..+.+        ...|+||-+
T Consensus        21 m~~I~iIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~l~~~g~~~~-------~~~~~~~--------~~aDvvi~~   84 (310)
T 3doj_A           21 MMEVGFLGLGIMGKAMSMNLLKNGF-KVTVWNRTLSKCDELVEHGASVC-------ESPAEVI--------KKCKYTIAM   84 (310)
T ss_dssp             SCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTCEEC-------SSHHHHH--------HHCSEEEEC
T ss_pred             CCEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCeEc-------CCHHHHH--------HhCCEEEEE
Confidence            3589999999999999998888998 68889999998888887775321       1222222        247888888


Q ss_pred             cCChHHHHHHH-------HhhcCCCEEEEEc
Q 018075          259 VGFDKTMSTAL-------NATRPGGKVCLIG  282 (361)
Q Consensus       259 ~g~~~~~~~~~-------~~l~~~G~~v~~g  282 (361)
                      +..+......+       ..+.++..++.++
T Consensus        85 vp~~~~~~~v~~~~~~l~~~l~~g~~vv~~s  115 (310)
T 3doj_A           85 LSDPCAALSVVFDKGGVLEQICEGKGYIDMS  115 (310)
T ss_dssp             CSSHHHHHHHHHSTTCGGGGCCTTCEEEECS
T ss_pred             cCCHHHHHHHHhCchhhhhccCCCCEEEECC
Confidence            87664555544       3455666666554

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=95.78  E-value=0.043  Score=47.43  Aligned_cols=82  Identities=18%  Similarity=0.244  Sum_probs=50.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeC-ChhHHHH----HHHcCCCE-EeecC-CCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDV-DVQRLSI----ARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~-~~~~~~~----~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      .|.++||.| +|++|.+.++.+...|+ .|+.+++ +++..+.    +++.+... .+..+ .+..+..+.+.++.+. .
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~  105 (271)
T 4iin_A           28 TGKNVLITGASKGIGAEIAKTLASMGL-KVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQS-D  105 (271)
T ss_dssp             SCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh-c
Confidence            578899998 59999999998888999 5666666 4444332    23334332 22211 2223344444444332 2


Q ss_pred             CCccEEEEccCC
Q 018075          250 SGIDVSFDCVGF  261 (361)
Q Consensus       250 ~~~d~vld~~g~  261 (361)
                      .++|+++++.|.
T Consensus       106 g~id~li~nAg~  117 (271)
T 4iin_A          106 GGLSYLVNNAGV  117 (271)
T ss_dssp             SSCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            479999999874

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=95.78  E-value=0.045  Score=47.84  Aligned_cols=36  Identities=28%  Similarity=0.382  Sum_probs=32.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  213 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~  213 (361)
                      .+.+|+|+|+|++|..+++.+...|...+..+|.+.
T Consensus        35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~   70 (292)
T 3h8v_A           35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK   70 (292)
T ss_dssp             GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred             hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence            568999999999999999999999998899888665

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=95.78  E-value=0.048  Score=47.50  Aligned_cols=82  Identities=16%  Similarity=0.177  Sum_probs=51.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHc---C-CC-EEeecC-CCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---G-AD-ETAKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g-~~-~~~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      .|.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ +++   + .. ..+..+ .+..+..+.+.++.+.. 
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-  109 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGY-SVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEF-  109 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            578899998 59999999998888999 688888888765433 222   2 11 222221 23334444444443322 


Q ss_pred             CCccEEEEccCC
Q 018075          250 SGIDVSFDCVGF  261 (361)
Q Consensus       250 ~~~d~vld~~g~  261 (361)
                      +++|+++++.|.
T Consensus       110 g~iD~lvnnAG~  121 (281)
T 4dry_A          110 ARLDLLVNNAGS  121 (281)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999874

>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}

Probab=95.78  E-value=0.028  Score=47.86  Aligned_cols=104  Identities=14%  Similarity=0.127  Sum_probs=66.1

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHH----HHHHHcCCC-EEeecCCCccchhHHHHHHHhhc
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRL----SIARNLGAD-ETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~----~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      ...++.+||-+|+|. |..++.+|+..+ ...|++++.+++..    +.+++.|.. .+....   .+..+.+..+...+
T Consensus        57 ~~~~~~~VLDiG~G~-G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~---gda~~~l~~~~~~~  132 (242)
T 3r3h_A           57 RLTRAKKVLELGTFT-GYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRL---GPALDTLHSLLNEG  132 (242)
T ss_dssp             HHHTCSEEEEEESCC-SHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEE---SCHHHHHHHHHHHH
T ss_pred             hhcCcCEEEEeeCCc-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE---cCHHHHHHHHhhcc
Confidence            345678999999876 778888888763 23799999988643    444555643 221111   23333333332111


Q ss_pred             -CCCccEEEEccCCh---HHHHHHHHhhcCCCEEEEEc
Q 018075          249 -GSGIDVSFDCVGFD---KTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       249 -~~~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~~g  282 (361)
                       ...||+||-.....   ..++.+.+.|+|||.++.-.
T Consensus       133 ~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~  170 (242)
T 3r3h_A          133 GEHQFDFIFIDADKTNYLNYYELALKLVTPKGLIAIDN  170 (242)
T ss_dssp             CSSCEEEEEEESCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCCEeEEEEcCChHHhHHHHHHHHHhcCCCeEEEEEC
Confidence             36799998644422   34778889999999998754

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=95.77  E-value=0.054  Score=47.02  Aligned_cols=82  Identities=18%  Similarity=0.255  Sum_probs=52.7

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHH----cCCCE-EeecC-CCccchhHHHHHHHhhc
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARN----LGADE-TAKVS-TDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~----lg~~~-~~~~~-~~~~~~~~~~~~~~~~~  248 (361)
                      -.|.++||.| +|++|.+.++.+...|+ .|+.++++.++.+ .+++    .+... .+..+ .+..+..+.+.++.+..
T Consensus        25 l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~  103 (277)
T 4fc7_A           25 LRDKVAFITGGGSGIGFRIAEIFMRHGC-HTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEF  103 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3578999998 58999999998888999 6888888876543 2222    24322 12111 22334444444443322


Q ss_pred             CCCccEEEEccC
Q 018075          249 GSGIDVSFDCVG  260 (361)
Q Consensus       249 ~~~~d~vld~~g  260 (361)
                       +++|+++++.|
T Consensus       104 -g~id~lv~nAg  114 (277)
T 4fc7_A          104 -GRIDILINCAA  114 (277)
T ss_dssp             -SCCCEEEECCC
T ss_pred             -CCCCEEEECCc
Confidence             47999999987

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=95.77  E-value=0.039  Score=48.42  Aligned_cols=82  Identities=18%  Similarity=0.316  Sum_probs=52.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCC---CEE--eecC-CCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGA---DET--AKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~---~~~--~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      .|.++||.| +|++|.+.++.+...|+ .|+.++++.++.+ ..+++..   ..+  +..+ .+..+..+.+.++.+.. 
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-  117 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGA-NVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAF-  117 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHc-
Confidence            578899998 59999999998888999 6778888776543 3333421   111  2111 22233444444443322 


Q ss_pred             CCccEEEEccCC
Q 018075          250 SGIDVSFDCVGF  261 (361)
Q Consensus       250 ~~~d~vld~~g~  261 (361)
                      +++|+++++.|.
T Consensus       118 g~iD~lvnnAg~  129 (293)
T 3rih_A          118 GALDVVCANAGI  129 (293)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999998874

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=95.77  E-value=0.12  Score=44.54  Aligned_cols=83  Identities=17%  Similarity=0.280  Sum_probs=49.0

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEe-CChhHHHH-HH---HcCCC-EEeecC-CCccchhHHHHHHHhhc
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITD-VDVQRLSI-AR---NLGAD-ETAKVS-TDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~-~~~~~~~~-~~---~lg~~-~~~~~~-~~~~~~~~~~~~~~~~~  248 (361)
                      ..+.++||.| +|++|.+.++.+...|+ .|+.++ ++.++.+. ++   +.+.. ..+..+ .+..+..+.+.++.+..
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  101 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGM-AVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF  101 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            3567889998 59999999998888999 566665 55444332 22   22322 122111 22233444444443322


Q ss_pred             CCCccEEEEccCC
Q 018075          249 GSGIDVSFDCVGF  261 (361)
Q Consensus       249 ~~~~d~vld~~g~  261 (361)
                       +++|+++++.|.
T Consensus       102 -g~id~li~nAg~  113 (269)
T 3gk3_A          102 -GKVDVLINNAGI  113 (269)
T ss_dssp             -SCCSEEEECCCC
T ss_pred             -CCCCEEEECCCc
Confidence             379999999874

>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}

Probab=95.76  E-value=0.024  Score=46.56  Aligned_cols=94  Identities=15%  Similarity=0.120  Sum_probs=64.3

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEc
Q 018075          179 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  258 (361)
Q Consensus       179 g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  258 (361)
                      +.+||-+|||. |..+..+++. |. .+++++.+++..+.+++......+. ..   ++.+    +. .....+|+|+..
T Consensus        42 ~~~vLDiGcG~-G~~~~~l~~~-~~-~v~gvD~s~~~~~~a~~~~~~~~~~-~~---d~~~----~~-~~~~~fD~v~~~  109 (203)
T 3h2b_A           42 DGVILDVGSGT-GRWTGHLASL-GH-QIEGLEPATRLVELARQTHPSVTFH-HG---TITD----LS-DSPKRWAGLLAW  109 (203)
T ss_dssp             CSCEEEETCTT-CHHHHHHHHT-TC-CEEEECCCHHHHHHHHHHCTTSEEE-CC---CGGG----GG-GSCCCEEEEEEE
T ss_pred             CCeEEEecCCC-CHHHHHHHhc-CC-eEEEEeCCHHHHHHHHHhCCCCeEE-eC---cccc----cc-cCCCCeEEEEeh
Confidence            78999999876 6777777776 77 6999999999888888753221111 11   2211    11 124679999884


Q ss_pred             c--------CChHHHHHHHHhhcCCCEEEEEccC
Q 018075          259 V--------GFDKTMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       259 ~--------g~~~~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      .        .-...++.+.+.|+|||+++.....
T Consensus       110 ~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~  143 (203)
T 3h2b_A          110 YSLIHMGPGELPDALVALRMAVEDGGGLLMSFFS  143 (203)
T ss_dssp             SSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred             hhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEcc
Confidence            3        1134788899999999999876533

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=95.75  E-value=0.1  Score=45.08  Aligned_cols=84  Identities=13%  Similarity=0.141  Sum_probs=50.8

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH----HHcCCCE-EeecC-CCccchhHHHHHHHhhcC
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADE-TAKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      .++.++||.| +|++|.+.++.+...|+++++...++.++.+.+    ++.+... .+..+ .+..+..+.+.++.+.. 
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-  102 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQF-  102 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhC-
Confidence            4578899998 599999999998889995434446666654432    2233322 11111 22233444444443322 


Q ss_pred             CCccEEEEccCC
Q 018075          250 SGIDVSFDCVGF  261 (361)
Q Consensus       250 ~~~d~vld~~g~  261 (361)
                      +++|+++++.|.
T Consensus       103 g~id~li~nAg~  114 (272)
T 4e3z_A          103 GRLDGLVNNAGI  114 (272)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999998873

>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*

Probab=95.73  E-value=0.049  Score=44.27  Aligned_cols=99  Identities=16%  Similarity=0.243  Sum_probs=65.0

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc----CCCEEeecCCCccchhHHHHHHHhhc
Q 018075          173 RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       173 ~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      .....++.+||-+|||. |..+..+++. |. .+++++.+++..+.+++.    +...+.....   ++..    +.  .
T Consensus        27 ~~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~---d~~~----~~--~   94 (199)
T 2xvm_A           27 AVKVVKPGKTLDLGCGN-GRNSLYLAAN-GY-DVDAWDKNAMSIANVERIKSIENLDNLHTRVV---DLNN----LT--F   94 (199)
T ss_dssp             HTTTSCSCEEEEETCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHHTCTTEEEEEC---CGGG----CC--C
T ss_pred             HhhccCCCeEEEEcCCC-CHHHHHHHHC-CC-eEEEEECCHHHHHHHHHHHHhCCCCCcEEEEc---chhh----CC--C
Confidence            34556788999999875 7777788876 77 799999999877776552    3211111111   2211    10  1


Q ss_pred             CCCccEEEEccC--------ChHHHHHHHHhhcCCCEEEEEcc
Q 018075          249 GSGIDVSFDCVG--------FDKTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       249 ~~~~d~vld~~g--------~~~~~~~~~~~l~~~G~~v~~g~  283 (361)
                      ...+|+|+....        ....++.+.+.|+|||+++.+..
T Consensus        95 ~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  137 (199)
T 2xvm_A           95 DRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAA  137 (199)
T ss_dssp             CCCEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             CCCceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEe
Confidence            357999987532        12367788899999999887653

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=95.73  E-value=0.046  Score=49.29  Aligned_cols=89  Identities=20%  Similarity=0.199  Sum_probs=64.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      .|.+|.|+|.|.+|...++.++.+|+ .|++.+++. +.+.+.+.|+...       .++.+.+        ...|+|+-
T Consensus       159 ~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~~~~~g~~~~-------~~l~ell--------~~aDiV~l  221 (352)
T 3gg9_A          159 KGQTLGIFGYGKIGQLVAGYGRAFGM-NVLVWGREN-SKERARADGFAVA-------ESKDALF--------EQSDVLSV  221 (352)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSHH-HHHHHHHTTCEEC-------SSHHHHH--------HHCSEEEE
T ss_pred             CCCEEEEEeECHHHHHHHHHHHhCCC-EEEEECCCC-CHHHHHhcCceEe-------CCHHHHH--------hhCCEEEE
Confidence            47899999999999999999999999 688888765 4455566776421       1232222        24789998


Q ss_pred             ccCChHH-----HHHHHHhhcCCCEEEEEcc
Q 018075          258 CVGFDKT-----MSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       258 ~~g~~~~-----~~~~~~~l~~~G~~v~~g~  283 (361)
                      ++.....     -...+..|++++.++-++.
T Consensus       222 ~~Plt~~t~~li~~~~l~~mk~gailIN~aR  252 (352)
T 3gg9_A          222 HLRLNDETRSIITVADLTRMKPTALFVNTSR  252 (352)
T ss_dssp             CCCCSTTTTTCBCHHHHTTSCTTCEEEECSC
T ss_pred             eccCcHHHHHhhCHHHHhhCCCCcEEEECCC
Confidence            7753211     2367788999998888874

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=95.73  E-value=0.042  Score=47.85  Aligned_cols=81  Identities=20%  Similarity=0.274  Sum_probs=51.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHc---CCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---GADE-TAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      .|.++||.| +|++|.+.++.+...|+ .|+.++++.++.+.+ +++   +... .+..+ .+..+....+.++.+.. +
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   84 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGA-KVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRF-G   84 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc-C
Confidence            578899998 59999999998888999 688888888765433 333   2221 11111 12223333344333222 4


Q ss_pred             CccEEEEccC
Q 018075          251 GIDVSFDCVG  260 (361)
Q Consensus       251 ~~d~vld~~g  260 (361)
                      ++|+++++.|
T Consensus        85 ~iD~lvnnAg   94 (280)
T 3tox_A           85 GLDTAFNNAG   94 (280)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=95.73  E-value=0.16  Score=42.21  Aligned_cols=92  Identities=14%  Similarity=-0.007  Sum_probs=60.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHH-HcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEcc
Q 018075          181 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV  259 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  259 (361)
                      +|+|.|+|.+|...++.+...|. .|++++.++++.+.+. +++...+ ..+.  .+ .+.++   ..+-.++|+++-++
T Consensus         2 ~iiIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~l~~~~~~~~i-~gd~--~~-~~~l~---~a~i~~ad~vi~~~   73 (218)
T 3l4b_C            2 KVIIIGGETTAYYLARSMLSRKY-GVVIINKDRELCEEFAKKLKATII-HGDG--SH-KEILR---DAEVSKNDVVVILT   73 (218)
T ss_dssp             CEEEECCHHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHHSSSEEE-ESCT--TS-HHHHH---HHTCCTTCEEEECC
T ss_pred             EEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHcCCeEE-EcCC--CC-HHHHH---hcCcccCCEEEEec
Confidence            58899999999999999998998 5888999999887654 4565432 2122  12 12222   22346899999999


Q ss_pred             CChHHHH---HHHHhhcCCCEEEE
Q 018075          260 GFDKTMS---TALNATRPGGKVCL  280 (361)
Q Consensus       260 g~~~~~~---~~~~~l~~~G~~v~  280 (361)
                      +.+..-.   ...+.+.+..+++.
T Consensus        74 ~~d~~n~~~~~~a~~~~~~~~iia   97 (218)
T 3l4b_C           74 PRDEVNLFIAQLVMKDFGVKRVVS   97 (218)
T ss_dssp             SCHHHHHHHHHHHHHTSCCCEEEE
T ss_pred             CCcHHHHHHHHHHHHHcCCCeEEE
Confidence            9773221   22233445556554

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=95.72  E-value=0.029  Score=47.70  Aligned_cols=76  Identities=11%  Similarity=0.140  Sum_probs=45.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHH-----HHHHhhcCCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDV-----GKIQNAMGSG  251 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~  251 (361)
                      .+.++||.| +|++|.+.++.+.. |. .|+.+++++++.+.+.+......+..     +..+..     .+... .-.+
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g~-~v~~~~r~~~~~~~~~~~~~~~~~~~-----D~~~~~~~~~~~~~~~-~~~~   75 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-DH-IVYALGRNPEHLAALAEIEGVEPIES-----DIVKEVLEEGGVDKLK-NLDH   75 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHHTSTTEEEEEC-----CHHHHHHTSSSCGGGT-TCSC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHhhcCCcceec-----ccchHHHHHHHHHHHH-hcCC
Confidence            467899998 59999988887654 77 68888898888776665432222221     111110     00100 1247


Q ss_pred             ccEEEEccCC
Q 018075          252 IDVSFDCVGF  261 (361)
Q Consensus       252 ~d~vld~~g~  261 (361)
                      +|+++++.|.
T Consensus        76 id~lv~~Ag~   85 (245)
T 3e9n_A           76 VDTLVHAAAV   85 (245)
T ss_dssp             CSEEEECC--
T ss_pred             CCEEEECCCc
Confidence            9999999875

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=95.72  E-value=0.062  Score=47.17  Aligned_cols=81  Identities=19%  Similarity=0.286  Sum_probs=50.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHc--------CCCE-EeecC-CCccchhHHHHHHH
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL--------GADE-TAKVS-TDIEDVDTDVGKIQ  245 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l--------g~~~-~~~~~-~~~~~~~~~~~~~~  245 (361)
                      .+.++||.| +|++|.+.+..+...|+ .|+.++++.++.+.+ +++        +... .+..+ .+..++.+.+.++.
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   95 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL   95 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHH
Confidence            468999998 59999999998888999 688888887665432 222        2221 11111 22233333444333


Q ss_pred             hhcCCCccEEEEccC
Q 018075          246 NAMGSGIDVSFDCVG  260 (361)
Q Consensus       246 ~~~~~~~d~vld~~g  260 (361)
                      +.. +++|++|++.|
T Consensus        96 ~~~-g~id~li~~Ag  109 (303)
T 1yxm_A           96 DTF-GKINFLVNNGG  109 (303)
T ss_dssp             HHH-SCCCEEEECCC
T ss_pred             HHc-CCCCEEEECCC
Confidence            222 37999999987

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.72  E-value=0.043  Score=46.30  Aligned_cols=100  Identities=20%  Similarity=0.273  Sum_probs=59.8

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecC-CCccchhHHHHHHHhhcC-CCccEE
Q 018075          179 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS-TDIEDVDTDVGKIQNAMG-SGIDVS  255 (361)
Q Consensus       179 g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~d~v  255 (361)
                      +.++||.| +|++|.+.++.+...|+ .|+.+++++++.+     +....+..+ .+..+..+.+.++.+..+ .++|++
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~l   76 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQA-----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   76 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTS-----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecCccccc-----cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence            56889998 59999999998888999 6777877765431     111111111 111223333333332222 579999


Q ss_pred             EEccCC--------h---H---------------HHHHHHHhhcCCCEEEEEccC
Q 018075          256 FDCVGF--------D---K---------------TMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       256 ld~~g~--------~---~---------------~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      +++.|.        .   +               ..+.+.+.|..+|+++.++..
T Consensus        77 v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~  131 (236)
T 1ooe_A           77 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAA  131 (236)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred             EECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECch
Confidence            999883        1   1               123344555567899988743

>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}

Probab=95.71  E-value=0.041  Score=47.34  Aligned_cols=105  Identities=14%  Similarity=0.139  Sum_probs=66.0

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCC--------EEeecCCCccchhHHHHHHH
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD--------ETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~--------~~~~~~~~~~~~~~~~~~~~  245 (361)
                      ..++++++||-+|+|. |..++.+++......+++++.+++..+.+++.-..        .+..+..   ++.+......
T Consensus        32 ~~~~~~~~VLDlG~G~-G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~---D~~~~~~~~~  107 (260)
T 2ozv_A           32 VADDRACRIADLGAGA-GAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEA---DVTLRAKARV  107 (260)
T ss_dssp             CCCCSCEEEEECCSSS-SHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEEC---CTTCCHHHHH
T ss_pred             hcccCCCEEEEeCChH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeC---CHHHHhhhhh
Confidence            5577889999998765 66777777776433799999999988888763221        1211222   2222211110


Q ss_pred             --hhcCCCccEEEEccC------------------------ChHHHHHHHHhhcCCCEEEEEc
Q 018075          246 --NAMGSGIDVSFDCVG------------------------FDKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       246 --~~~~~~~d~vld~~g------------------------~~~~~~~~~~~l~~~G~~v~~g  282 (361)
                        ......||+|+....                        -...++.+.+.|+++|+++++-
T Consensus       108 ~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  170 (260)
T 2ozv_A          108 EAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLIS  170 (260)
T ss_dssp             HTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             hhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence              012457999987511                        1235677788999999998864

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=95.70  E-value=0.016  Score=48.96  Aligned_cols=96  Identities=10%  Similarity=0.142  Sum_probs=58.7

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          180 TNVMIMG-SGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       180 ~~vlI~G-~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      .+|||.| +|.+|.+.++.+...| + .|+++++++++.+.+...++.. +.  .+-.+.. .+.++.    .++|+||.
T Consensus        24 k~vlVtGatG~iG~~l~~~L~~~G~~-~V~~~~R~~~~~~~~~~~~~~~-~~--~Dl~d~~-~~~~~~----~~~D~vv~   94 (236)
T 3qvo_A           24 KNVLILGAGGQIARHVINQLADKQTI-KQTLFARQPAKIHKPYPTNSQI-IM--GDVLNHA-ALKQAM----QGQDIVYA   94 (236)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTE-EEEEEESSGGGSCSSCCTTEEE-EE--CCTTCHH-HHHHHH----TTCSEEEE
T ss_pred             cEEEEEeCCcHHHHHHHHHHHhCCCc-eEEEEEcChhhhcccccCCcEE-EE--ecCCCHH-HHHHHh----cCCCEEEE
Confidence            5799998 6999999999998889 6 6888888876543221112221 11  1112222 232222    36899999


Q ss_pred             ccCChH---HHHHHHHhhcC--CCEEEEEccC
Q 018075          258 CVGFDK---TMSTALNATRP--GGKVCLIGLA  284 (361)
Q Consensus       258 ~~g~~~---~~~~~~~~l~~--~G~~v~~g~~  284 (361)
                      +.+...   ..+.+++.+..  .+++|.++..
T Consensus        95 ~a~~~~~~~~~~~~~~~~~~~~~~~iV~iSS~  126 (236)
T 3qvo_A           95 NLTGEDLDIQANSVIAAMKACDVKRLIFVLSL  126 (236)
T ss_dssp             ECCSTTHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             cCCCCchhHHHHHHHHHHHHcCCCEEEEEecc
Confidence            888653   23344555533  3689888753

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=95.70  E-value=0.058  Score=46.43  Aligned_cols=85  Identities=15%  Similarity=0.186  Sum_probs=53.7

Q ss_pred             CCCCCCEEEEEC-C--CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH----HHcCCCEEeecC-CCccchhHHHHHHHh
Q 018075          175 NVGPETNVMIMG-S--GPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADETAKVS-TDIEDVDTDVGKIQN  246 (361)
Q Consensus       175 ~~~~g~~vlI~G-~--g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~~~~~-~~~~~~~~~~~~~~~  246 (361)
                      ...++.++||.| +  +++|.+.++.+...|+ .|+.+++++...+.+    ++.+....+..+ .+..+....+.++.+
T Consensus        10 ~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   88 (271)
T 3ek2_A           10 GFLDGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKT   88 (271)
T ss_dssp             CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHH
Confidence            345789999998 6  7999999998888999 677777765443333    333422222222 223344444444443


Q ss_pred             hcCCCccEEEEccCC
Q 018075          247 AMGSGIDVSFDCVGF  261 (361)
Q Consensus       247 ~~~~~~d~vld~~g~  261 (361)
                      . -+++|+++++.|.
T Consensus        89 ~-~g~id~lv~nAg~  102 (271)
T 3ek2_A           89 H-WDSLDGLVHSIGF  102 (271)
T ss_dssp             H-CSCEEEEEECCCC
T ss_pred             H-cCCCCEEEECCcc
Confidence            2 3479999998873

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=95.70  E-value=0.051  Score=46.21  Aligned_cols=82  Identities=20%  Similarity=0.347  Sum_probs=50.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeC-ChhHHHH-HH---HcCCCE-EeecC-CCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDV-DVQRLSI-AR---NLGADE-TAKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~-~~~~~~~-~~---~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++ ++++.+. ++   +.+... .+..+ .+..+..+.+.++.+.. 
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   80 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGA-NVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVF-   80 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-
Confidence            467899998 59999999998888999 5777766 6655432 22   234322 12111 22233444444443322 


Q ss_pred             CCccEEEEccCC
Q 018075          250 SGIDVSFDCVGF  261 (361)
Q Consensus       250 ~~~d~vld~~g~  261 (361)
                      +++|+++++.|.
T Consensus        81 g~id~lv~nAg~   92 (246)
T 2uvd_A           81 GQVDILVNNAGV   92 (246)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999874

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=95.70  E-value=0.11  Score=45.81  Aligned_cols=49  Identities=12%  Similarity=0.164  Sum_probs=38.0

Q ss_pred             HHHHhcCC-CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC---hhHHH
Q 018075          169 HACRRANV-GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD---VQRLS  217 (361)
Q Consensus       169 ~~l~~~~~-~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~---~~~~~  217 (361)
                      .+++...+ -.+.++||+|+|+.|.+++..+...|++.|.++.++   .++.+
T Consensus       137 ~~L~~~~~~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~  189 (312)
T 3t4e_A          137 RAIKESGFDMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAV  189 (312)
T ss_dssp             HHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHH
T ss_pred             HHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHH
Confidence            44554333 368899999999999999999999999778888888   55443

>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}

Probab=95.69  E-value=0.048  Score=46.77  Aligned_cols=102  Identities=16%  Similarity=0.222  Sum_probs=66.6

Q ss_pred             hcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCC-EEeecCCCccchhHHHHHHHh
Q 018075          173 RANVG-PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGAD-ETAKVSTDIEDVDTDVGKIQN  246 (361)
Q Consensus       173 ~~~~~-~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~~~~~~~  246 (361)
                      ...++ ++++||-+|||. |..++.+++.... .|++++.+++..+.+++    .+.. .+.....   ++.+....+  
T Consensus        43 ~~~~~~~~~~vLDlG~G~-G~~~~~la~~~~~-~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~---D~~~~~~~~--  115 (259)
T 3lpm_A           43 FSYLPIRKGKIIDLCSGN-GIIPLLLSTRTKA-KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEY---DLKKITDLI--  115 (259)
T ss_dssp             HCCCCSSCCEEEETTCTT-THHHHHHHTTCCC-EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECS---CGGGGGGTS--
T ss_pred             HhcCCCCCCEEEEcCCch-hHHHHHHHHhcCC-cEEEEECCHHHHHHHHHHHHHCCCcccEEEEEC---cHHHhhhhh--
Confidence            35677 899999998775 6677777776555 89999999988777765    2432 1222222   222221111  


Q ss_pred             hcCCCccEEEEccC--------C------------------hHHHHHHHHhhcCCCEEEEEc
Q 018075          247 AMGSGIDVSFDCVG--------F------------------DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       247 ~~~~~~d~vld~~g--------~------------------~~~~~~~~~~l~~~G~~v~~g  282 (361)
                       ....||+|+....        .                  ...++.+.+.|+++|+++.+-
T Consensus       116 -~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  176 (259)
T 3lpm_A          116 -PKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVH  176 (259)
T ss_dssp             -CTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             -ccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEE
Confidence             1467999998321        0                  136677889999999999864

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=95.68  E-value=0.072  Score=49.09  Aligned_cols=97  Identities=12%  Similarity=0.145  Sum_probs=60.6

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCC--CEEEEEeCChhHHHH-HHHcCC-----CEEeecCCCccchhHHHHHHHhhcCCC
Q 018075          180 TNVMIMGSGPIGLVTLLAARAFGA--PRIIITDVDVQRLSI-ARNLGA-----DETAKVSTDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       180 ~~vlI~G~g~~G~~ai~la~~~g~--~~vv~v~~~~~~~~~-~~~lg~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (361)
                      .+|+|+|+|.+|..+++.+...|.  ..|+.++++.++.+. +++++.     ...+..+-  .+. +.+.++.+  ..+
T Consensus         2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~--~d~-~~l~~~l~--~~~   76 (405)
T 4ina_A            2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDA--DSI-EELVALIN--EVK   76 (405)
T ss_dssp             CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCT--TCH-HHHHHHHH--HHC
T ss_pred             CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecC--CCH-HHHHHHHH--hhC
Confidence            378999999999999998877773  368888888887654 344431     12222111  111 12222221  125


Q ss_pred             ccEEEEccCChHHHHHHHHhhcCCCEEEEE
Q 018075          252 IDVSFDCVGFDKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       252 ~d~vld~~g~~~~~~~~~~~l~~~G~~v~~  281 (361)
                      +|+|+++++...+..-+..++..+-+++.+
T Consensus        77 ~DvVin~ag~~~~~~v~~a~l~~g~~vvD~  106 (405)
T 4ina_A           77 PQIVLNIALPYQDLTIMEACLRTGVPYLDT  106 (405)
T ss_dssp             CSEEEECSCGGGHHHHHHHHHHHTCCEEES
T ss_pred             CCEEEECCCcccChHHHHHHHHhCCCEEEe
Confidence            899999998654555556677777777754

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=95.68  E-value=0.033  Score=50.15  Aligned_cols=92  Identities=16%  Similarity=0.207  Sum_probs=67.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      .|.+|.|+|.|.+|...++.++.+|+ .|++.+++..+.+.+++.|+...       .++.+    +    -...|+|+-
T Consensus       163 ~gktvGIIG~G~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~~-------~~l~e----l----l~~aDvV~l  226 (351)
T 3jtm_A          163 EGKTIGTVGAGRIGKLLLQRLKPFGC-NLLYHDRLQMAPELEKETGAKFV-------EDLNE----M----LPKCDVIVI  226 (351)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGCC-EEEEECSSCCCHHHHHHHCCEEC-------SCHHH----H----GGGCSEEEE
T ss_pred             cCCEEeEEEeCHHHHHHHHHHHHCCC-EEEEeCCCccCHHHHHhCCCeEc-------CCHHH----H----HhcCCEEEE
Confidence            58899999999999999999999999 68888887766677777786431       12222    2    136899998


Q ss_pred             ccCChH-----HHHHHHHhhcCCCEEEEEccCC
Q 018075          258 CVGFDK-----TMSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       258 ~~g~~~-----~~~~~~~~l~~~G~~v~~g~~~  285 (361)
                      ++....     .-...+..|+++..++-++...
T Consensus       227 ~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~  259 (351)
T 3jtm_A          227 NMPLTEKTRGMFNKELIGKLKKGVLIVNNARGA  259 (351)
T ss_dssp             CSCCCTTTTTCBSHHHHHHSCTTEEEEECSCGG
T ss_pred             CCCCCHHHHHhhcHHHHhcCCCCCEEEECcCch
Confidence            876321     1256778899999888776543

>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20

Probab=95.67  E-value=0.03  Score=47.51  Aligned_cols=99  Identities=14%  Similarity=0.206  Sum_probs=63.3

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHh--hc
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQN--AM  248 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~--~~  248 (361)
                      .++++.+||-+|||. |..++.+++......|++++.+++..+.+++    .+...+....   .+..+    +..  ..
T Consensus        67 ~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~---~d~~~----~~~~~~~  138 (240)
T 1xdz_A           67 DFNQVNTICDVGAGA-GFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCH---DRAET----FGQRKDV  138 (240)
T ss_dssp             CGGGCCEEEEECSSS-CTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEE---SCHHH----HTTCTTT
T ss_pred             ccCCCCEEEEecCCC-CHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEe---ccHHH----hcccccc
Confidence            446789999999874 6677777775543379999999988777655    4543322211   12221    110  01


Q ss_pred             CCCccEEEEcc-CC-hHHHHHHHHhhcCCCEEEEE
Q 018075          249 GSGIDVSFDCV-GF-DKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       249 ~~~~d~vld~~-g~-~~~~~~~~~~l~~~G~~v~~  281 (361)
                      ...||+|+... .. ...++.+.+.|+|||+++..
T Consensus       139 ~~~fD~V~~~~~~~~~~~l~~~~~~LkpgG~l~~~  173 (240)
T 1xdz_A          139 RESYDIVTARAVARLSVLSELCLPLVKKNGLFVAL  173 (240)
T ss_dssp             TTCEEEEEEECCSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred             cCCccEEEEeccCCHHHHHHHHHHhcCCCCEEEEE
Confidence            35799998643 22 23566677899999999876

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=95.67  E-value=0.021  Score=48.73  Aligned_cols=77  Identities=21%  Similarity=0.264  Sum_probs=48.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  256 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  256 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.++++.++.+.+.  +  ...++ .+..+..+.+.++.+. .+++|+++
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~--~--~~~D~-~~~~~~~~~~~~~~~~-~g~id~lv   86 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKGLF--G--VEVDV-TDSDAVDRAFTAVEEH-QGPVEVLV   86 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTTSE--E--EECCT-TCHHHHHHHHHHHHHH-HSSCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHhc--C--eeccC-CCHHHHHHHHHHHHHH-cCCCCEEE
Confidence            467899998 59999999998888999 6777777665432211  1  12232 2223344444444322 24799999


Q ss_pred             EccCC
Q 018075          257 DCVGF  261 (361)
Q Consensus       257 d~~g~  261 (361)
                      ++.|.
T Consensus        87 ~~Ag~   91 (247)
T 1uzm_A           87 SNAGL   91 (247)
T ss_dssp             EECSC
T ss_pred             ECCCC
Confidence            98874

>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42

Probab=95.65  E-value=0.017  Score=49.01  Aligned_cols=96  Identities=13%  Similarity=0.096  Sum_probs=63.6

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCC----EEeecCCCccchhHHHHHHHhhcCCCc
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD----ETAKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      +++.+||-+|||. |..+..+++..+. .+++++.+++..+.+++....    .+.....   ++..    +. .....|
T Consensus        78 ~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~---d~~~----~~-~~~~~f  147 (241)
T 2ex4_A           78 TGTSCALDCGAGI-GRITKRLLLPLFR-EVDMVDITEDFLVQAKTYLGEEGKRVRNYFCC---GLQD----FT-PEPDSY  147 (241)
T ss_dssp             CCCSEEEEETCTT-THHHHHTTTTTCS-EEEEEESCHHHHHHHHHHTGGGGGGEEEEEEC---CGGG----CC-CCSSCE
T ss_pred             CCCCEEEEECCCC-CHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHhhhcCCceEEEEEc---Chhh----cC-CCCCCE
Confidence            4689999999876 7777777776644 799999999988888764322    1111111   2111    10 013469


Q ss_pred             cEEEEccC-----Ch---HHHHHHHHhhcCCCEEEEEc
Q 018075          253 DVSFDCVG-----FD---KTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       253 d~vld~~g-----~~---~~~~~~~~~l~~~G~~v~~g  282 (361)
                      |+|+....     .+   ..+..+.+.|+|||+++...
T Consensus       148 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  185 (241)
T 2ex4_A          148 DVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKD  185 (241)
T ss_dssp             EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence            99987532     11   36788889999999999864

>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...

Probab=95.65  E-value=0.036  Score=46.28  Aligned_cols=102  Identities=15%  Similarity=0.180  Sum_probs=62.6

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEEeCChhHHHHHHH----cCCCE-EeecCCCccchhHHHHHHHh-
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARAF--GAPRIIITDVDVQRLSIARN----LGADE-TAKVSTDIEDVDTDVGKIQN-  246 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~~--g~~~vv~v~~~~~~~~~~~~----lg~~~-~~~~~~~~~~~~~~~~~~~~-  246 (361)
                      ...++.+||-+|+|. |..++.+++..  +. .|++++.+++..+.+++    .|... +....   .+..+.+..+.. 
T Consensus        55 ~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~~l~~~~~~  129 (221)
T 3u81_A           55 REYSPSLVLELGAYC-GYSAVRMARLLQPGA-RLLTMEINPDCAAITQQMLNFAGLQDKVTILN---GASQDLIPQLKKK  129 (221)
T ss_dssp             HHHCCSEEEEECCTT-SHHHHHHHTTSCTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEE---SCHHHHGGGTTTT
T ss_pred             HhcCCCEEEEECCCC-CHHHHHHHHhCCCCC-EEEEEeCChHHHHHHHHHHHHcCCCCceEEEE---CCHHHHHHHHHHh
Confidence            345788999999876 77888888865  45 79999999988777665    35432 21111   233232222210 


Q ss_pred             hcCCCccEEEEccCChHH------HHHHHHhhcCCCEEEEEc
Q 018075          247 AMGSGIDVSFDCVGFDKT------MSTALNATRPGGKVCLIG  282 (361)
Q Consensus       247 ~~~~~~d~vld~~g~~~~------~~~~~~~l~~~G~~v~~g  282 (361)
                      .....||+||-.......      +... +.|+|||.++.-.
T Consensus       130 ~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~  170 (221)
T 3u81_A          130 YDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADN  170 (221)
T ss_dssp             SCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESC
T ss_pred             cCCCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeC
Confidence            011579999875533311      1222 7899999988654

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=95.65  E-value=0.081  Score=45.52  Aligned_cols=82  Identities=16%  Similarity=0.191  Sum_probs=49.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeC-ChhHHHH----HHHcCCCE-EeecC-CCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDV-DVQRLSI----ARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~-~~~~~~~----~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      ++.++||.| +|++|.+.+..+...|+ .|+.+++ +.++.+.    +++.+... .+..+ .+..++.+.+.++... -
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   97 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH-F   97 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH-H
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH-c
Confidence            567899998 59999999998888999 5777766 6555432    22334332 12211 2222333334333322 2


Q ss_pred             CCccEEEEccCC
Q 018075          250 SGIDVSFDCVGF  261 (361)
Q Consensus       250 ~~~d~vld~~g~  261 (361)
                      .++|+++++.|.
T Consensus        98 ~~~d~vi~~Ag~  109 (274)
T 1ja9_A           98 GGLDFVMSNSGM  109 (274)
T ss_dssp             SCEEEEECCCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999998873

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=95.62  E-value=0.11  Score=44.26  Aligned_cols=81  Identities=21%  Similarity=0.278  Sum_probs=51.1

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HH---cCCCE-EeecC-CCccchhHHHHHHHhhcCCC
Q 018075          179 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN---LGADE-TAKVS-TDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       179 g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~  251 (361)
                      +.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ ++   .+... .+..+ .+..+..+.+.++.+. -++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~g~   79 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKT-LGG   79 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH-TTC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH-hCC
Confidence            46889998 59999999998888999 688888887665432 22   24321 12111 2223344444444332 247


Q ss_pred             ccEEEEccCC
Q 018075          252 IDVSFDCVGF  261 (361)
Q Consensus       252 ~d~vld~~g~  261 (361)
                      +|+++++.|.
T Consensus        80 id~lv~nAg~   89 (256)
T 1geg_A           80 FDVIVNNAGV   89 (256)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999998873

>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42

Probab=95.61  E-value=0.05  Score=46.22  Aligned_cols=102  Identities=14%  Similarity=0.030  Sum_probs=67.0

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCC--CEEeecCCCccchhHHHHHHHhhc
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA--DETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~--~~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      +......++.+||-+|||. |..+..+++.. ...+++++.++...+.+++.-.  ..+....   .++..    + ...
T Consensus        86 l~~l~~~~~~~vLDiG~G~-G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~---~d~~~----~-~~~  155 (254)
T 1xtp_A           86 IASLPGHGTSRALDCGAGI-GRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGMPVGKFIL---ASMET----A-TLP  155 (254)
T ss_dssp             HHTSTTCCCSEEEEETCTT-THHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTSSEEEEEE---SCGGG----C-CCC
T ss_pred             HHhhcccCCCEEEEECCCc-CHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccCCceEEEE---ccHHH----C-CCC
Confidence            3445567889999999876 77777777765 4479999999998888877532  1211111   12111    0 011


Q ss_pred             CCCccEEEEccC--------ChHHHHHHHHhhcCCCEEEEEc
Q 018075          249 GSGIDVSFDCVG--------FDKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       249 ~~~~d~vld~~g--------~~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ...||+|+....        ....+..+.+.|+|||+++...
T Consensus       156 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  197 (254)
T 1xtp_A          156 PNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKE  197 (254)
T ss_dssp             SSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence            357999987432        1235778889999999999875

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=95.59  E-value=0.048  Score=46.77  Aligned_cols=82  Identities=22%  Similarity=0.271  Sum_probs=50.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhH-HH-HHHHc----CCCE-EeecC-CCccchhHHHHHHHhhc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQR-LS-IARNL----GADE-TAKVS-TDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~-~~-~~~~l----g~~~-~~~~~-~~~~~~~~~~~~~~~~~  248 (361)
                      ++.++||.| +|++|.+.++.+...|+ .|+.+++++++ .+ ..+++    +... .+..+ .+..+..+.+.++.+..
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            467899998 59999999998888999 57777777665 33 23332    4322 11111 22233334444433222


Q ss_pred             CCCccEEEEccCC
Q 018075          249 GSGIDVSFDCVGF  261 (361)
Q Consensus       249 ~~~~d~vld~~g~  261 (361)
                       +++|+++++.|.
T Consensus        82 -g~iD~lv~~Ag~   93 (260)
T 1x1t_A           82 -GRIDILVNNAGI   93 (260)
T ss_dssp             -SCCSEEEECCCC
T ss_pred             -CCCCEEEECCCC
Confidence             479999998873

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=95.58  E-value=0.065  Score=46.39  Aligned_cols=82  Identities=20%  Similarity=0.366  Sum_probs=52.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HH---cCCCEE-eecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN---LGADET-AKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~~-~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      .|.++||.| +|++|.+.++.+...|+ .|+.++++.++.+.+ ++   .+.... +..+ .+..+..+.+.++.+. ..
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g  102 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGA-RILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQ-GI  102 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHH-TC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH-CC
Confidence            578899998 59999999998888999 688888887765432 22   343321 1111 2223344444444332 34


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|+++++.|.
T Consensus       103 ~iD~lv~nAg~  113 (271)
T 4ibo_A          103 DVDILVNNAGI  113 (271)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999884

>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}

Probab=95.57  E-value=0.074  Score=43.76  Aligned_cols=101  Identities=16%  Similarity=0.019  Sum_probs=60.6

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCC---CEEeecCCCccc------------
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGA---DETAKVSTDIED------------  236 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~---~~~~~~~~~~~~------------  236 (361)
                      +++.++||-+|+|   ..++.+|+..+. +|++++.+++..+.+++    .|.   +.+.....+...            
T Consensus        28 l~~a~~VLEiGtG---ySTl~lA~~~~g-~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~  103 (202)
T 3cvo_A           28 YEEAEVILEYGSG---GSTVVAAELPGK-HVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAK  103 (202)
T ss_dssp             HHHCSEEEEESCS---HHHHHHHTSTTC-EEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTT
T ss_pred             hhCCCEEEEECch---HHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchh
Confidence            3466899999985   577777774455 79999999987766554    453   333222111111            


Q ss_pred             ---hhHHHHHHHhhc-CCCccEEEEccCC-hHHHHHHHHhhcCCCEEEE
Q 018075          237 ---VDTDVGKIQNAM-GSGIDVSFDCVGF-DKTMSTALNATRPGGKVCL  280 (361)
Q Consensus       237 ---~~~~~~~~~~~~-~~~~d~vld~~g~-~~~~~~~~~~l~~~G~~v~  280 (361)
                         +......+.... ...||+||--... ...+..+++.|++||.++.
T Consensus       104 ~~~l~~~~~~i~~~~~~~~fDlIfIDg~k~~~~~~~~l~~l~~GG~Iv~  152 (202)
T 3cvo_A          104 WRSYPDYPLAVWRTEGFRHPDVVLVDGRFRVGCALATAFSITRPVTLLF  152 (202)
T ss_dssp             GGGTTHHHHGGGGCTTCCCCSEEEECSSSHHHHHHHHHHHCSSCEEEEE
T ss_pred             hhhHHHHhhhhhccccCCCCCEEEEeCCCchhHHHHHHHhcCCCeEEEE
Confidence               111121111111 2579999854331 2456778899999998854

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=95.56  E-value=0.064  Score=45.91  Aligned_cols=81  Identities=20%  Similarity=0.275  Sum_probs=49.8

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhH--HH-HHHHc---CCCE-EeecC-CCccchhHHHHHHHhhcC
Q 018075          179 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQR--LS-IARNL---GADE-TAKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       179 g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~--~~-~~~~l---g~~~-~~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      +.++||.| +|++|.+.++.+...|+ .|+.++++.++  .+ .++++   +... .+..+ .+..+..+.+.++.+.. 
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-   79 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGF-DIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKL-   79 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-
Confidence            57899998 59999999998888899 57777777665  32 33333   3221 11111 22233444444443322 


Q ss_pred             CCccEEEEccCC
Q 018075          250 SGIDVSFDCVGF  261 (361)
Q Consensus       250 ~~~d~vld~~g~  261 (361)
                      +++|+++++.|.
T Consensus        80 g~iD~lv~nAg~   91 (258)
T 3a28_C           80 GGFDVLVNNAGI   91 (258)
T ss_dssp             TCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999998874

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=95.56  E-value=0.088  Score=45.74  Aligned_cols=83  Identities=23%  Similarity=0.326  Sum_probs=51.7

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeC-ChhHHH-HH---HHcCCCE-EeecC-CCccchhHHHHHHHhhc
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDV-DVQRLS-IA---RNLGADE-TAKVS-TDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~-~~~~~~-~~---~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~  248 (361)
                      ..+.++||.| +|++|.+.++.+...|+ .|+.+++ +.++.+ .+   ++.+... .+..+ .+..+..+.+.++.+..
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  105 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAASGF-DIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF  105 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            4578899998 59999999998888999 5666664 555433 22   2334322 12111 23344555555554322


Q ss_pred             CCCccEEEEccCC
Q 018075          249 GSGIDVSFDCVGF  261 (361)
Q Consensus       249 ~~~~d~vld~~g~  261 (361)
                       +++|+++++.|.
T Consensus       106 -g~iD~lvnnAg~  117 (280)
T 4da9_A          106 -GRIDCLVNNAGI  117 (280)
T ss_dssp             -SCCCEEEEECC-
T ss_pred             -CCCCEEEECCCc
Confidence             479999999885

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=95.55  E-value=0.11  Score=44.87  Aligned_cols=83  Identities=14%  Similarity=0.308  Sum_probs=52.8

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HHHc----CCCE-EeecC-CCccchhHHHHHHHhhc
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNL----GADE-TAKVS-TDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~l----g~~~-~~~~~-~~~~~~~~~~~~~~~~~  248 (361)
                      -.+.++||.| +|++|.+.++.+...|+ .|+.++++.++.+. ++++    +... .+..+ .+..+..+.+.++.+..
T Consensus        19 l~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   97 (267)
T 1vl8_A           19 LRGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF   97 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            3578899998 59999999998888999 67888888766543 2222    4332 12111 22233444444443322


Q ss_pred             CCCccEEEEccCC
Q 018075          249 GSGIDVSFDCVGF  261 (361)
Q Consensus       249 ~~~~d~vld~~g~  261 (361)
                       +++|+++++.|.
T Consensus        98 -g~iD~lvnnAg~  109 (267)
T 1vl8_A           98 -GKLDTVVNAAGI  109 (267)
T ss_dssp             -SCCCEEEECCCC
T ss_pred             -CCCCEEEECCCc
Confidence             479999999874

>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}

Probab=95.54  E-value=0.077  Score=47.63  Aligned_cols=131  Identities=17%  Similarity=0.153  Sum_probs=80.0

Q ss_pred             CEEEEECCCHHHHHHHHHHHHc-CCCEEEEEeCChhHHH-HHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          180 TNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       180 ~~vlI~G~g~~G~~ai~la~~~-g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      -+|.|+|+|.+|...+..++.. +++.+.+.+.++++.+ +++++|+..   +    .++.+.+      ....+|+|+.
T Consensus         5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~---~----~~~~~~l------~~~~~D~V~i   71 (344)
T 3euw_A            5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGAEA---V----ASPDEVF------ARDDIDGIVI   71 (344)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTCEE---E----SSHHHHT------TCSCCCEEEE
T ss_pred             eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCce---e----CCHHHHh------cCCCCCEEEE
Confidence            3789999999998887766665 6644446677777754 456677422   1    1332222      1357999999


Q ss_pred             ccCChHHHHHHHHhhcCCCEEEEEccCCCCcceech---H-hhhcCcEE-EEeec-CCCcHHHHHHHHHcCCC
Q 018075          258 CVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT---P-AAAREVDV-IGIFR-YRSTWPLCIEFLRSGKI  324 (361)
Q Consensus       258 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~-~~~~~~~i-~~~~~-~~~~~~~~~~~l~~g~~  324 (361)
                      |+....+.+.+..++..|-.+ ++.-+.....-...   . .-..+..+ .+... +...++.+.+++++|.+
T Consensus        72 ~tp~~~h~~~~~~al~~gk~v-~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~i  143 (344)
T 3euw_A           72 GSPTSTHVDLITRAVERGIPA-LCEKPIDLDIEMVRACKEKIGDGASKVMLGFNRRFDPSFAAINARVANQEI  143 (344)
T ss_dssp             CSCGGGHHHHHHHHHHTTCCE-EECSCSCSCHHHHHHHHHHHGGGGGGEEECCGGGGCHHHHHHHHHHHTTTT
T ss_pred             eCCchhhHHHHHHHHHcCCcE-EEECCCCCCHHHHHHHHHHHHhcCCeEEecchhhcCHHHHHHHHHHhcCCC
Confidence            999888888888888877554 44432211111111   1 11222222 22222 25678889999999887

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=95.53  E-value=0.072  Score=44.80  Aligned_cols=82  Identities=21%  Similarity=0.239  Sum_probs=50.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-H----HcCCCE-EeecC-CCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-R----NLGADE-TAKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~----~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      ++.++||.| +|++|.+.++.+...|+ .|+.++++.++.+.+ +    +.+... .+..+ .+..+..+.+.++.+.. 
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-   78 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGY-ALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERF-   78 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHH-
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhc-
Confidence            367899998 59999999999988999 588888887765433 2    234332 11111 22223333333333222 


Q ss_pred             CCccEEEEccCC
Q 018075          250 SGIDVSFDCVGF  261 (361)
Q Consensus       250 ~~~d~vld~~g~  261 (361)
                      +++|+++++.|.
T Consensus        79 g~id~li~~Ag~   90 (235)
T 3l77_A           79 GDVDVVVANAGL   90 (235)
T ss_dssp             SSCSEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            479999999874

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=95.53  E-value=0.13  Score=45.00  Aligned_cols=81  Identities=15%  Similarity=0.236  Sum_probs=51.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HHHc----CCCE-EeecC-CCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNL----GADE-TAKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~l----g~~~-~~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      .+.++||.| +|++|.+.+..+...|+ .|+.++++.++.+. ++++    +... .+..+ .+..+..+.+.++.+. .
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~-~  102 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV-A  102 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH-T
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHH-c
Confidence            468899998 59999999998888999 68888888766543 2222    4321 12111 2223344444443322 3


Q ss_pred             CCccEEEEccC
Q 018075          250 SGIDVSFDCVG  260 (361)
Q Consensus       250 ~~~d~vld~~g  260 (361)
                      +++|+++++.|
T Consensus       103 g~id~li~~Ag  113 (302)
T 1w6u_A          103 GHPNIVINNAA  113 (302)
T ss_dssp             CSCSEEEECCC
T ss_pred             CCCCEEEECCC
Confidence            47999999987

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=95.53  E-value=0.1  Score=44.16  Aligned_cols=82  Identities=20%  Similarity=0.299  Sum_probs=51.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHH-H----cCCCE-EeecC-CCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-N----LGADE-TAKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~----lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      ++.++||.| +|++|...++.+...|+ .|+.++++.++.+.+. +    .+... .+..+ .+..++.+.+.++.+. -
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   83 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGS-TVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNL-V   83 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHh-c
Confidence            467899998 59999999998888999 6888888876654332 2    24321 12111 2223344444444332 2


Q ss_pred             CCccEEEEccCC
Q 018075          250 SGIDVSFDCVGF  261 (361)
Q Consensus       250 ~~~d~vld~~g~  261 (361)
                      +++|+++++.|.
T Consensus        84 ~~~d~vi~~Ag~   95 (248)
T 2pnf_A           84 DGIDILVNNAGI   95 (248)
T ss_dssp             SCCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999998873

>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}

Probab=95.53  E-value=0.021  Score=47.26  Aligned_cols=97  Identities=18%  Similarity=0.164  Sum_probs=63.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHHH----cCCCE-EeecCCCccchhHHHHHHHhhcCC
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADE-TAKVSTDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~  250 (361)
                      .++.+||-+|+|. |..++.+++... ...+++++.+++..+.+++    .+... +....   .+..+.+..    ...
T Consensus        55 ~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~---~d~~~~~~~----~~~  126 (210)
T 3c3p_A           55 KQPQLVVVPGDGL-GCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQV---GDPLGIAAG----QRD  126 (210)
T ss_dssp             HCCSEEEEESCGG-GHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEE---SCHHHHHTT----CCS
T ss_pred             hCCCEEEEEcCCc-cHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEE---ecHHHHhcc----CCC
Confidence            4678999999876 888888888763 3379999999988777664    23321 11111   222222211    134


Q ss_pred             CccEEEEccC---ChHHHHHHHHhhcCCCEEEEEc
Q 018075          251 GIDVSFDCVG---FDKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       251 ~~d~vld~~g---~~~~~~~~~~~l~~~G~~v~~g  282 (361)
                       ||+|+-...   ....++.+.+.|+|||.++.-.
T Consensus       127 -fD~v~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~  160 (210)
T 3c3p_A          127 -IDILFMDCDVFNGADVLERMNRCLAKNALLIAVN  160 (210)
T ss_dssp             -EEEEEEETTTSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred             -CCEEEEcCChhhhHHHHHHHHHhcCCCeEEEEEC
Confidence             999986432   1246788889999999998743

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=95.52  E-value=0.057  Score=46.86  Aligned_cols=82  Identities=21%  Similarity=0.193  Sum_probs=52.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HHHcCCCE-EeecC-CCccchhHHHHHHHhhcCCCcc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.++++.++.+. .++++... .+..+ .+..+..+.+.++.+.. +++|
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-g~id   81 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGD-TVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARY-GRVD   81 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHH-SCCS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhC-CCCC
Confidence            467899998 59999999998888999 67888887766543 44454322 22211 22233444444443322 4799


Q ss_pred             EEEEccCC
Q 018075          254 VSFDCVGF  261 (361)
Q Consensus       254 ~vld~~g~  261 (361)
                      +++++.|.
T Consensus        82 ~lv~~Ag~   89 (281)
T 3m1a_A           82 VLVNNAGR   89 (281)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999874

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=95.52  E-value=0.026  Score=50.44  Aligned_cols=91  Identities=16%  Similarity=0.223  Sum_probs=65.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      .|.+|.|+|.|.+|...++.++.+|+ .|++.+++..+.+.+.++|+..        .++.+.+        ...|+|+-
T Consensus       144 ~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~--------~~l~ell--------~~aDvV~l  206 (330)
T 4e5n_A          144 DNATVGFLGMGAIGLAMADRLQGWGA-TLQYHEAKALDTQTEQRLGLRQ--------VACSELF--------ASSDFILL  206 (330)
T ss_dssp             TTCEEEEECCSHHHHHHHHHTTTSCC-EEEEECSSCCCHHHHHHHTEEE--------CCHHHHH--------HHCSEEEE
T ss_pred             CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCCCcHhHHHhcCcee--------CCHHHHH--------hhCCEEEE
Confidence            47899999999999999999999999 6888888775556666667532        1222222        24789988


Q ss_pred             ccCChH-----HHHHHHHhhcCCCEEEEEccCC
Q 018075          258 CVGFDK-----TMSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       258 ~~g~~~-----~~~~~~~~l~~~G~~v~~g~~~  285 (361)
                      ++....     .-...+..|++++.++.++...
T Consensus       207 ~~P~t~~t~~li~~~~l~~mk~gailIN~arg~  239 (330)
T 4e5n_A          207 ALPLNADTLHLVNAELLALVRPGALLVNPCRGS  239 (330)
T ss_dssp             CCCCSTTTTTCBCHHHHTTSCTTEEEEECSCGG
T ss_pred             cCCCCHHHHHHhCHHHHhhCCCCcEEEECCCCc
Confidence            876321     1246778889999888776543

>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}

Probab=95.52  E-value=0.026  Score=48.57  Aligned_cols=95  Identities=18%  Similarity=0.189  Sum_probs=62.8

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  256 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  256 (361)
                      ..+.+||=+|||. |.++..+++. |. .|+++|.+++-.+.+++..--..+.  .+.+++.        .....||+|+
T Consensus        38 ~~~~~vLDvGcGt-G~~~~~l~~~-~~-~v~gvD~s~~ml~~a~~~~~v~~~~--~~~e~~~--------~~~~sfD~v~  104 (257)
T 4hg2_A           38 PARGDALDCGCGS-GQASLGLAEF-FE-RVHAVDPGEAQIRQALRHPRVTYAV--APAEDTG--------LPPASVDVAI  104 (257)
T ss_dssp             SCSSEEEEESCTT-TTTHHHHHTT-CS-EEEEEESCHHHHHTCCCCTTEEEEE--CCTTCCC--------CCSSCEEEEE
T ss_pred             CCCCCEEEEcCCC-CHHHHHHHHh-CC-EEEEEeCcHHhhhhhhhcCCceeeh--hhhhhhc--------ccCCcccEEE
Confidence            3457888899886 8888777764 56 7999999988776665432111111  1111110        1245799998


Q ss_pred             EccC-----ChHHHHHHHHhhcCCCEEEEEccC
Q 018075          257 DCVG-----FDKTMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       257 d~~g-----~~~~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      .+..     .+..+.++.+.|+|||+++.+...
T Consensus       105 ~~~~~h~~~~~~~~~e~~rvLkpgG~l~~~~~~  137 (257)
T 4hg2_A          105 AAQAMHWFDLDRFWAELRRVARPGAVFAAVTYG  137 (257)
T ss_dssp             ECSCCTTCCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred             EeeehhHhhHHHHHHHHHHHcCCCCEEEEEECC
Confidence            7532     235788999999999999887643

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=95.51  E-value=0.071  Score=45.22  Aligned_cols=80  Identities=21%  Similarity=0.294  Sum_probs=50.1

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHc----CCC-EEeecC-CCccchhHHHHHHHhhcCC
Q 018075          179 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL----GAD-ETAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       179 g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l----g~~-~~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      +.++||.| +|++|.+.+..+...|+ .|+.+++++++.+.+ +++    +.. ..+..+ .+..++.+.+.++.+.. .
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~   79 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGD-RVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQF-G   79 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-C
Confidence            56899998 59999999998888998 688888887665433 333    221 111111 22233334444333222 4


Q ss_pred             CccEEEEccC
Q 018075          251 GIDVSFDCVG  260 (361)
Q Consensus       251 ~~d~vld~~g  260 (361)
                      ++|+++++.|
T Consensus        80 ~id~li~~Ag   89 (250)
T 2cfc_A           80 AIDVLVNNAG   89 (250)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCC
Confidence            7999999886

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=95.51  E-value=0.018  Score=52.22  Aligned_cols=92  Identities=15%  Similarity=0.224  Sum_probs=66.4

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      .|.+|.|+|.|.+|...++.++.+|++.|++.+++..+.+.++++|+...       .++.+.+        ...|+|+.
T Consensus       163 ~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g~~~~-------~~l~ell--------~~aDvV~l  227 (364)
T 2j6i_A          163 EGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVGARRV-------ENIEELV--------AQADIVTV  227 (364)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTTEEEC-------SSHHHHH--------HTCSEEEE
T ss_pred             CCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcCcEec-------CCHHHHH--------hcCCEEEE
Confidence            68899999999999999999999999438888877766666777775421       1222221        25899999


Q ss_pred             ccCChH----HH-HHHHHhhcCCCEEEEEccC
Q 018075          258 CVGFDK----TM-STALNATRPGGKVCLIGLA  284 (361)
Q Consensus       258 ~~g~~~----~~-~~~~~~l~~~G~~v~~g~~  284 (361)
                      ++....    .+ ...+..|++++.++.++..
T Consensus       228 ~~P~t~~t~~li~~~~l~~mk~ga~lIn~arG  259 (364)
T 2j6i_A          228 NAPLHAGTKGLINKELLSKFKKGAWLVNTARG  259 (364)
T ss_dssp             CCCCSTTTTTCBCHHHHTTSCTTEEEEECSCG
T ss_pred             CCCCChHHHHHhCHHHHhhCCCCCEEEECCCC
Confidence            887531    12 3567888999888877653

>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41

Probab=95.50  E-value=0.055  Score=46.36  Aligned_cols=93  Identities=19%  Similarity=0.298  Sum_probs=63.4

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  256 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  256 (361)
                      .++.+||-+|||. |..+..+++. |. .+++++.+++..+.+++......+..+.  .++.     +   ....||+|+
T Consensus        53 ~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~gvD~s~~~l~~a~~~~~~~~~~~d~--~~~~-----~---~~~~fD~v~  119 (260)
T 2avn_A           53 KNPCRVLDLGGGT-GKWSLFLQER-GF-EVVLVDPSKEMLEVAREKGVKNVVEAKA--EDLP-----F---PSGAFEAVL  119 (260)
T ss_dssp             CSCCEEEEETCTT-CHHHHHHHTT-TC-EEEEEESCHHHHHHHHHHTCSCEEECCT--TSCC-----S---CTTCEEEEE
T ss_pred             CCCCeEEEeCCCc-CHHHHHHHHc-CC-eEEEEeCCHHHHHHHHhhcCCCEEECcH--HHCC-----C---CCCCEEEEE
Confidence            3889999999875 6677777765 77 7999999999988888765432222111  1110     1   135799998


Q ss_pred             EccC-------ChHHHHHHHHhhcCCCEEEEEc
Q 018075          257 DCVG-------FDKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       257 d~~g-------~~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ....       ....++.+.+.|+|||+++...
T Consensus       120 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  152 (260)
T 2avn_A          120 ALGDVLSYVENKDKAFSEIRRVLVPDGLLIATV  152 (260)
T ss_dssp             ECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EcchhhhccccHHHHHHHHHHHcCCCeEEEEEe
Confidence            7431       1235677889999999998753

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=95.50  E-value=0.036  Score=50.71  Aligned_cols=91  Identities=16%  Similarity=0.159  Sum_probs=65.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      .|.++.|+|.|.+|...++.++.+|. .|++.+++..+.+.++++|+...       .++.    ++.    ...|+|+.
T Consensus       190 ~gktvGIIGlG~IG~~vA~~l~a~G~-~V~~~d~~~~~~~~~~~~G~~~~-------~~l~----ell----~~aDvV~l  253 (393)
T 2nac_A          190 EAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKELNLTWH-------ATRE----DMY----PVCDVVTL  253 (393)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHHTCEEC-------SSHH----HHG----GGCSEEEE
T ss_pred             CCCEEEEEeECHHHHHHHHHHHhCCC-EEEEEcCCccchhhHhhcCceec-------CCHH----HHH----hcCCEEEE
Confidence            57899999999999999999999999 68888887666666677776431       1222    221    36889988


Q ss_pred             ccCChH----HH-HHHHHhhcCCCEEEEEccC
Q 018075          258 CVGFDK----TM-STALNATRPGGKVCLIGLA  284 (361)
Q Consensus       258 ~~g~~~----~~-~~~~~~l~~~G~~v~~g~~  284 (361)
                      ++....    .+ ...+..|+++..++.++..
T Consensus       254 ~~Plt~~t~~li~~~~l~~mk~gailIN~aRG  285 (393)
T 2nac_A          254 NCPLHPETEHMINDETLKLFKRGAYIVNTARG  285 (393)
T ss_dssp             CSCCCTTTTTCBSHHHHTTSCTTEEEEECSCG
T ss_pred             ecCCchHHHHHhhHHHHhhCCCCCEEEECCCc
Confidence            876321    12 4567788888877777643

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=95.50  E-value=0.072  Score=45.68  Aligned_cols=81  Identities=16%  Similarity=0.182  Sum_probs=49.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEE-eCChhHHHHHHHc----CCC-EEeecC-CCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIIT-DVDVQRLSIARNL----GAD-ETAKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v-~~~~~~~~~~~~l----g~~-~~~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+ .++++..+.+++.    +.. ..+..+ .+..+..+.+.++.+.. 
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-   83 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGY-SVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHF-   83 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh-
Confidence            357899998 59999999998888999 45665 4445544444332    211 111111 22334444444444322 


Q ss_pred             CCccEEEEccC
Q 018075          250 SGIDVSFDCVG  260 (361)
Q Consensus       250 ~~~d~vld~~g  260 (361)
                      .++|+++++.|
T Consensus        84 g~id~lv~~Ag   94 (264)
T 3i4f_A           84 GKIDFLINNAG   94 (264)
T ss_dssp             SCCCEEECCCC
T ss_pred             CCCCEEEECCc
Confidence            47999999998

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=95.50  E-value=0.049  Score=51.12  Aligned_cols=96  Identities=15%  Similarity=0.171  Sum_probs=59.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEeCChhHHHHHHH-cCCCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      ++.+|+|+|+|.+|.+++..+... |. .|++++++.++.+.+.+ .+... +..+-  .+.. .+.+..    .++|+|
T Consensus        22 ~~k~VlIiGAGgiG~aia~~L~~~~g~-~V~v~~R~~~ka~~la~~~~~~~-~~~D~--~d~~-~l~~~l----~~~DvV   92 (467)
T 2axq_A           22 MGKNVLLLGSGFVAQPVIDTLAANDDI-NVTVACRTLANAQALAKPSGSKA-ISLDV--TDDS-ALDKVL----ADNDVV   92 (467)
T ss_dssp             -CEEEEEECCSTTHHHHHHHHHTSTTE-EEEEEESSHHHHHHHHGGGTCEE-EECCT--TCHH-HHHHHH----HTSSEE
T ss_pred             CCCEEEEECChHHHHHHHHHHHhCCCC-eEEEEECCHHHHHHHHHhcCCcE-EEEec--CCHH-HHHHHH----cCCCEE
Confidence            457899999999999999888777 56 68888888887655443 23322 12111  1221 222221    269999


Q ss_pred             EEccCChHHHHHHHHhhcCCCEEEEEc
Q 018075          256 FDCVGFDKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       256 ld~~g~~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ++|++......-...++.++-.++...
T Consensus        93 In~tp~~~~~~v~~a~l~~g~~vvd~~  119 (467)
T 2axq_A           93 ISLIPYTFHPNVVKSAIRTKTDVVTSS  119 (467)
T ss_dssp             EECSCGGGHHHHHHHHHHHTCEEEECS
T ss_pred             EECCchhhhHHHHHHHHhcCCEEEEee
Confidence            999986533333445666666666543

>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51

Probab=95.50  E-value=0.14  Score=45.78  Aligned_cols=100  Identities=16%  Similarity=0.188  Sum_probs=62.7

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCE--EeecCCCccchhHHHHHHHhhcC
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADE--TAKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~--~~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      ..++++||-+|||. |..++.+++ .|+ .|+++|.+++..+.+++    .+.+.  +..+.   .+..+.+..... .+
T Consensus       151 ~~~~~~VLDlgcGt-G~~sl~la~-~ga-~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~---~D~~~~l~~~~~-~~  223 (332)
T 2igt_A          151 ADRPLKVLNLFGYT-GVASLVAAA-AGA-EVTHVDASKKAIGWAKENQVLAGLEQAPIRWIC---EDAMKFIQREER-RG  223 (332)
T ss_dssp             SSSCCEEEEETCTT-CHHHHHHHH-TTC-EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEEC---SCHHHHHHHHHH-HT
T ss_pred             cCCCCcEEEccccc-CHHHHHHHH-cCC-EEEEEECCHHHHHHHHHHHHHcCCCccceEEEE---CcHHHHHHHHHh-cC
Confidence            45788999998754 556666666 577 89999999998877765    34321  21111   244333332211 14


Q ss_pred             CCccEEEEccC----------------ChHHHHHHHHhhcCCCEEEEEc
Q 018075          250 SGIDVSFDCVG----------------FDKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       250 ~~~d~vld~~g----------------~~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ..||+|+-...                -...+..+.+.|+|+|.++...
T Consensus       224 ~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~  272 (332)
T 2igt_A          224 STYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLT  272 (332)
T ss_dssp             CCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEE
T ss_pred             CCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence            57999987321                0236777789999999966543

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=95.47  E-value=0.05  Score=47.15  Aligned_cols=82  Identities=22%  Similarity=0.301  Sum_probs=51.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHc---C---CC-EEeecC-CCccchhHHHHHHHhh
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNL---G---AD-ETAKVS-TDIEDVDTDVGKIQNA  247 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~l---g---~~-~~~~~~-~~~~~~~~~~~~~~~~  247 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ +++   +   .. ..+..+ .+..+..+.+.++.+.
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   83 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence            467899998 59999999998888999 688888887765433 333   2   11 111111 2223334444443322


Q ss_pred             cCCCccEEEEccCC
Q 018075          248 MGSGIDVSFDCVGF  261 (361)
Q Consensus       248 ~~~~~d~vld~~g~  261 (361)
                      . +++|+++++.|.
T Consensus        84 ~-g~id~lv~~Ag~   96 (278)
T 1spx_A           84 F-GKLDILVNNAGA   96 (278)
T ss_dssp             H-SCCCEEEECCC-
T ss_pred             c-CCCCEEEECCCC
Confidence            2 479999999874

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=95.47  E-value=0.14  Score=44.56  Aligned_cols=82  Identities=15%  Similarity=0.250  Sum_probs=50.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeC-ChhHHHH-HHHc----CCCE-EeecC-CCccchhHHHHHHHhhc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDV-DVQRLSI-ARNL----GADE-TAKVS-TDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~-~~~~~~~-~~~l----g~~~-~~~~~-~~~~~~~~~~~~~~~~~  248 (361)
                      .+.++||.| +|++|.+.+..+...|+ .|+.+++ +.++.+. ++++    +... .+..+ .+..+..+.+.++.+. 
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~-  101 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKAGA-NIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADR-  101 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHH-
Confidence            468899998 59999999998888999 6777776 4444332 2222    2221 11111 2223344444444332 


Q ss_pred             CCCccEEEEccCC
Q 018075          249 GSGIDVSFDCVGF  261 (361)
Q Consensus       249 ~~~~d~vld~~g~  261 (361)
                      -+++|+++++.|.
T Consensus       102 ~g~iD~lv~nAg~  114 (281)
T 3v2h_A          102 FGGADILVNNAGV  114 (281)
T ss_dssp             TSSCSEEEECCCC
T ss_pred             CCCCCEEEECCCC
Confidence            3479999999874

>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*

Probab=95.46  E-value=0.029  Score=48.82  Aligned_cols=97  Identities=15%  Similarity=0.080  Sum_probs=63.8

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCE-EeecCCCccchhHHHHHHHhhcCC
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADE-TAKVSTDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~  250 (361)
                      +++|++||-+|||. |..++.+++.... .|++++.+++..+.+++    .+... +.....   +..+..      ...
T Consensus       123 ~~~~~~VLDlgcG~-G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~---D~~~~~------~~~  191 (278)
T 2frn_A          123 AKPDELVVDMFAGI-GHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNM---DNRDFP------GEN  191 (278)
T ss_dssp             CCTTCEEEETTCTT-TTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS---CTTTCC------CCS
T ss_pred             CCCCCEEEEecccC-CHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEEC---CHHHhc------ccC
Confidence            57899999988765 6667777775433 79999999988877765    24332 111111   111111      145


Q ss_pred             CccEEEEccCC--hHHHHHHHHhhcCCCEEEEEcc
Q 018075          251 GIDVSFDCVGF--DKTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       251 ~~d~vld~~g~--~~~~~~~~~~l~~~G~~v~~g~  283 (361)
                      .||+|+-....  ...+..+.+.|+|||.++....
T Consensus       192 ~fD~Vi~~~p~~~~~~l~~~~~~LkpgG~l~~~~~  226 (278)
T 2frn_A          192 IADRILMGYVVRTHEFIPKALSIAKDGAIIHYHNT  226 (278)
T ss_dssp             CEEEEEECCCSSGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred             CccEEEECCchhHHHHHHHHHHHCCCCeEEEEEEe
Confidence            79988774332  2478889999999999987643

>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46

Probab=95.46  E-value=0.021  Score=45.21  Aligned_cols=101  Identities=18%  Similarity=0.204  Sum_probs=63.0

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhhcCCC
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (361)
                      +.++++||-+|||. |..+..+++. +. .+++++.+++..+.+++    .+. .+....   .++.+....... .+..
T Consensus        39 ~~~~~~vLD~GcG~-G~~~~~l~~~-~~-~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~---~d~~~~~~~~~~-~~~~  110 (171)
T 1ws6_A           39 YPRRGRFLDPFAGS-GAVGLEAASE-GW-EAVLVEKDPEAVRLLKENVRRTGL-GARVVA---LPVEVFLPEAKA-QGER  110 (171)
T ss_dssp             CTTCCEEEEETCSS-CHHHHHHHHT-TC-EEEEECCCHHHHHHHHHHHHHHTC-CCEEEC---SCHHHHHHHHHH-TTCC
T ss_pred             ccCCCeEEEeCCCc-CHHHHHHHHC-CC-eEEEEeCCHHHHHHHHHHHHHcCC-ceEEEe---ccHHHHHHhhhc-cCCc
Confidence            34788999998765 6666677664 66 49999999987776655    232 111111   243333322211 1347


Q ss_pred             ccEEEEcc----CChHHHHHHH--HhhcCCCEEEEEccC
Q 018075          252 IDVSFDCV----GFDKTMSTAL--NATRPGGKVCLIGLA  284 (361)
Q Consensus       252 ~d~vld~~----g~~~~~~~~~--~~l~~~G~~v~~g~~  284 (361)
                      +|+|+...    .....++.+.  +.|+|+|.++.....
T Consensus       111 ~D~i~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~~~~  149 (171)
T 1ws6_A          111 FTVAFMAPPYAMDLAALFGELLASGLVEAGGLYVLQHPK  149 (171)
T ss_dssp             EEEEEECCCTTSCTTHHHHHHHHHTCEEEEEEEEEEEET
T ss_pred             eEEEEECCCCchhHHHHHHHHHhhcccCCCcEEEEEeCC
Confidence            99998752    2234666666  889999999875443

>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}

Probab=95.45  E-value=0.045  Score=45.06  Aligned_cols=80  Identities=19%  Similarity=0.133  Sum_probs=39.2

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  256 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  256 (361)
                      .++.+||-+|||. |..+..+++......+++++.+++..+.+++.-........-...++.+...... .....+|+|+
T Consensus        29 ~~~~~vLDiG~G~-G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~fD~i~  106 (215)
T 4dzr_A           29 PSGTRVIDVGTGS-GCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERA-ERGRPWHAIV  106 (215)
T ss_dssp             CTTEEEEEEESSB-CHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHHHHHHHH-HTTCCBSEEE
T ss_pred             CCCCEEEEecCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhhhhh-hccCcccEEE
Confidence            7889999999875 7777788887633379999999988877765322111011111123332221110 0136899999


Q ss_pred             Ec
Q 018075          257 DC  258 (361)
Q Consensus       257 d~  258 (361)
                      ..
T Consensus       107 ~n  108 (215)
T 4dzr_A          107 SN  108 (215)
T ss_dssp             EC
T ss_pred             EC
Confidence            73

>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}

Probab=95.44  E-value=0.22  Score=44.62  Aligned_cols=131  Identities=17%  Similarity=0.265  Sum_probs=80.4

Q ss_pred             EEEEECCCHHHHHHHHHHHHc-CCCEEEEEeCChhHHH-HHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEc
Q 018075          181 NVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  258 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~-g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  258 (361)
                      +|.|+|+|.+|...+..++.. +++.+.+.+.++++.+ +++++|.....      .++.+.+.      ...+|+|+.|
T Consensus         4 rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~------~~~~~ll~------~~~~D~V~i~   71 (344)
T 3ezy_A            4 RIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAY------KDPHELIE------DPNVDAVLVC   71 (344)
T ss_dssp             EEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEE------SSHHHHHH------CTTCCEEEEC
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCcee------CCHHHHhc------CCCCCEEEEc
Confidence            688999999998766655544 5643445677777754 56667765332      13333321      3579999999


Q ss_pred             cCChHHHHHHHHhhcCCCEEEEEccCCCCcceechH----hhhcCcEE-EEeec-CCCcHHHHHHHHHcCCC
Q 018075          259 VGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTP----AAAREVDV-IGIFR-YRSTWPLCIEFLRSGKI  324 (361)
Q Consensus       259 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~----~~~~~~~i-~~~~~-~~~~~~~~~~~l~~g~~  324 (361)
                      +....+.+.+..++..|-.++ +.-+.....-....    .-.+++.+ .+... +...++.+.+++++|.+
T Consensus        72 tp~~~h~~~~~~al~~gk~v~-~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~R~~p~~~~~k~~i~~G~i  142 (344)
T 3ezy_A           72 SSTNTHSELVIACAKAKKHVF-CEKPLSLNLADVDRMIEETKKADVILFTGFNRRFDRNFKKLKEAVENGTI  142 (344)
T ss_dssp             SCGGGHHHHHHHHHHTTCEEE-EESCSCSCHHHHHHHHHHHHHHTCCEEEECGGGGCHHHHHHHHHHHTTTT
T ss_pred             CCCcchHHHHHHHHhcCCeEE-EECCCCCCHHHHHHHHHHHHHhCCcEEEeecccCCHHHHHHHHHHHcCCC
Confidence            998888888888888775544 54322111111111    11223333 33322 36678889999999988

>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}

Probab=95.44  E-value=0.074  Score=47.47  Aligned_cols=132  Identities=15%  Similarity=0.045  Sum_probs=80.5

Q ss_pred             CEEEEECCCHHHHHHHHHHHHc-CCCEEEEEeCChhHHH-HHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          180 TNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       180 ~~vlI~G~g~~G~~ai~la~~~-g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      -++.|+|+|.+|...+..++.. +++.+.+.+.+.++.+ +++++|....  +    .++.+.+.      ...+|+|+.
T Consensus         6 ~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~--~----~~~~~ll~------~~~~D~V~i   73 (330)
T 3e9m_A            6 IRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVA--Y----GSYEELCK------DETIDIIYI   73 (330)
T ss_dssp             EEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCC--B----SSHHHHHH------CTTCSEEEE
T ss_pred             EEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCce--e----CCHHHHhc------CCCCCEEEE
Confidence            3788999999998877766664 5643445577777654 5666776321  1    23333321      357999999


Q ss_pred             ccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechH----hhhcCcEEE-Eeec-CCCcHHHHHHHHHcCCC
Q 018075          258 CVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTP----AAAREVDVI-GIFR-YRSTWPLCIEFLRSGKI  324 (361)
Q Consensus       258 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~----~~~~~~~i~-~~~~-~~~~~~~~~~~l~~g~~  324 (361)
                      ++....+.+.+..+|..|-.+ .+.-+.....-....    .-.+++.+. +... +...++.+.+++++|.+
T Consensus        74 ~tp~~~h~~~~~~al~~gk~v-l~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~~~r~~p~~~~~k~~i~~g~i  145 (330)
T 3e9m_A           74 PTYNQGHYSAAKLALSQGKPV-LLEKPFTLNAAEAEELFAIAQEQGVFLMEAQKSVFLPITQKVKATIQEGGL  145 (330)
T ss_dssp             CCCGGGHHHHHHHHHHTTCCE-EECSSCCSSHHHHHHHHHHHHHTTCCEEECCSGGGCHHHHHHHHHHHTTTT
T ss_pred             cCCCHHHHHHHHHHHHCCCeE-EEeCCCCCCHHHHHHHHHHHHHcCCeEEEEEhhhhCHHHHHHHHHHhCCCC
Confidence            999888888888888887554 444322111111111    122333332 2222 25668889999999887

>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0

Probab=95.43  E-value=0.048  Score=44.55  Aligned_cols=101  Identities=22%  Similarity=0.212  Sum_probs=58.1

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHh-hcCCCcc
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN-AMGSGID  253 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d  253 (361)
                      -+++|++||=+|||+ |..+..+++. +. .|+++|.++...    .-++.. +.-+-........+.+... .....+|
T Consensus        22 ~~~~g~~VLDlG~G~-G~~s~~la~~-~~-~V~gvD~~~~~~----~~~v~~-~~~D~~~~~~~~~~~~~~~~~~~~~~D   93 (191)
T 3dou_A           22 VVRKGDAVIEIGSSP-GGWTQVLNSL-AR-KIISIDLQEMEE----IAGVRF-IRCDIFKETIFDDIDRALREEGIEKVD   93 (191)
T ss_dssp             CSCTTCEEEEESCTT-CHHHHHHTTT-CS-EEEEEESSCCCC----CTTCEE-EECCTTSSSHHHHHHHHHHHHTCSSEE
T ss_pred             CCCCCCEEEEEeecC-CHHHHHHHHc-CC-cEEEEecccccc----CCCeEE-EEccccCHHHHHHHHHHhhcccCCcce
Confidence            468999999999765 5566666665 66 799999987521    012221 2211111222222222211 0113899


Q ss_pred             EEEEc-----cCCh------------HHHHHHHHhhcCCCEEEEEcc
Q 018075          254 VSFDC-----VGFD------------KTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       254 ~vld~-----~g~~------------~~~~~~~~~l~~~G~~v~~g~  283 (361)
                      +|+..     .|..            ..++.+.+.|+|||++++.-.
T Consensus        94 ~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~  140 (191)
T 3dou_A           94 DVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQF  140 (191)
T ss_dssp             EEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEc
Confidence            99973     2321            245567789999999986543

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=95.43  E-value=0.059  Score=46.10  Aligned_cols=82  Identities=18%  Similarity=0.206  Sum_probs=49.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeC-ChhHHHH-HHH---cCCCE-EeecC-CCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDV-DVQRLSI-ARN---LGADE-TAKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~-~~~~~~~-~~~---lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      ++.++||.| +|++|.+.++.+...|+ .|+.+++ +.++.+. .++   .+... .+..+ .+..+..+.+.++.+.. 
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   83 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF-   83 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            467899998 69999999998888899 5777777 6654432 222   24321 12111 22233333444433222 


Q ss_pred             CCccEEEEccCC
Q 018075          250 SGIDVSFDCVGF  261 (361)
Q Consensus       250 ~~~d~vld~~g~  261 (361)
                      .++|++|++.|.
T Consensus        84 g~id~li~~Ag~   95 (261)
T 1gee_A           84 GKLDVMINNAGL   95 (261)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            379999998873

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=95.42  E-value=0.029  Score=48.88  Aligned_cols=96  Identities=16%  Similarity=0.143  Sum_probs=58.2

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEc
Q 018075          181 NVMIMG-SGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  258 (361)
Q Consensus       181 ~vlI~G-~g~~G~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  258 (361)
                      +|||.| +|.+|...++.+... |. .|+++++++++...+...+...+ ..  +-.+. +.+.+.    -.++|+||.+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~-~V~~~~R~~~~~~~~~~~~v~~~-~~--D~~d~-~~l~~~----~~~~d~vi~~   72 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHID-HFHIGVRNVEKVPDDWRGKVSVR-QL--DYFNQ-ESMVEA----FKGMDTVVFI   72 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCT-TEEEEESSGGGSCGGGBTTBEEE-EC--CTTCH-HHHHHH----TTTCSEEEEC
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCC-cEEEEECCHHHHHHhhhCCCEEE-Ec--CCCCH-HHHHHH----HhCCCEEEEe
Confidence            589999 599999999988777 77 57777787766543333343322 21  11222 222222    2479999999


Q ss_pred             cCCh-------HHHHHHHHhhcCC--CEEEEEccCC
Q 018075          259 VGFD-------KTMSTALNATRPG--GKVCLIGLAK  285 (361)
Q Consensus       259 ~g~~-------~~~~~~~~~l~~~--G~~v~~g~~~  285 (361)
                      .+..       .....+++.+...  ++++.++...
T Consensus        73 a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~  108 (289)
T 3e48_A           73 PSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYA  108 (289)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESC
T ss_pred             CCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcccC
Confidence            8752       1334455555433  5888887543

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=95.41  E-value=0.047  Score=45.54  Aligned_cols=95  Identities=19%  Similarity=0.317  Sum_probs=57.4

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEc
Q 018075          180 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  258 (361)
Q Consensus       180 ~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  258 (361)
                      .+|||.| +|.+|...++.+...|. .|+++++++++.+.+. -+. ..+.  .+-.+.. .+.+..    .++|+||.+
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-~~~-~~~~--~Dl~d~~-~~~~~~----~~~d~vi~~   74 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGF-EVTAVVRHPEKIKIEN-EHL-KVKK--ADVSSLD-EVCEVC----KGADAVISA   74 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTC-EEEEECSCGGGCCCCC-TTE-EEEC--CCTTCHH-HHHHHH----TTCSEEEEC
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCC-EEEEEEcCcccchhcc-Cce-EEEE--ecCCCHH-HHHHHh----cCCCEEEEe
Confidence            5899999 59999999999988998 7888888876543211 111 1111  1222222 222222    369999999


Q ss_pred             cCCh-----------HHHHHHHHhhcCC--CEEEEEccC
Q 018075          259 VGFD-----------KTMSTALNATRPG--GKVCLIGLA  284 (361)
Q Consensus       259 ~g~~-----------~~~~~~~~~l~~~--G~~v~~g~~  284 (361)
                      .|..           .....+++.+...  ++++.++..
T Consensus        75 a~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~  113 (227)
T 3dhn_A           75 FNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGA  113 (227)
T ss_dssp             CCC------CCSHHHHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred             CcCCCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCCh
Confidence            8754           1233344444433  488888754

>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*

Probab=95.41  E-value=0.028  Score=47.63  Aligned_cols=99  Identities=14%  Similarity=0.063  Sum_probs=59.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHH---c--CCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCC
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARA---F--GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~---~--g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (361)
                      .++++||-+|+|. |..++.+++.   +  +. .|++++.+++..+.++.+... +.....+..+... +..+   ....
T Consensus        80 ~~~~~VLDiG~Gt-G~~t~~la~~~~~~~~~~-~V~gvD~s~~~l~~a~~~~~~-v~~~~gD~~~~~~-l~~~---~~~~  152 (236)
T 2bm8_A           80 LRPRTIVELGVYN-GGSLAWFRDLTKIMGIDC-QVIGIDRDLSRCQIPASDMEN-ITLHQGDCSDLTT-FEHL---REMA  152 (236)
T ss_dssp             HCCSEEEEECCTT-SHHHHHHHHHHHHTTCCC-EEEEEESCCTTCCCCGGGCTT-EEEEECCSSCSGG-GGGG---SSSC
T ss_pred             cCCCEEEEEeCCC-CHHHHHHHHhhhhcCCCC-EEEEEeCChHHHHHHhccCCc-eEEEECcchhHHH-HHhh---ccCC
Confidence            3568999999875 7777778776   3  45 799999998876655544321 1111111111100 1111   1236


Q ss_pred             ccEEEEccCC---hHHHHHHHH-hhcCCCEEEEEc
Q 018075          252 IDVSFDCVGF---DKTMSTALN-ATRPGGKVCLIG  282 (361)
Q Consensus       252 ~d~vld~~g~---~~~~~~~~~-~l~~~G~~v~~g  282 (361)
                      +|+|+-..+.   ...+..+.+ .|+|||+++...
T Consensus       153 fD~I~~d~~~~~~~~~l~~~~r~~LkpGG~lv~~d  187 (236)
T 2bm8_A          153 HPLIFIDNAHANTFNIMKWAVDHLLEEGDYFIIED  187 (236)
T ss_dssp             SSEEEEESSCSSHHHHHHHHHHHTCCTTCEEEECS
T ss_pred             CCEEEECCchHhHHHHHHHHHHhhCCCCCEEEEEe
Confidence            9988754332   234666665 999999998753

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=95.41  E-value=0.037  Score=47.04  Aligned_cols=75  Identities=12%  Similarity=0.029  Sum_probs=50.3

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEE-e--CChhHHHH-HHHc-CCCEEeecCCCccchhHHHHHHHhhcCCCc
Q 018075          179 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIIT-D--VDVQRLSI-ARNL-GADETAKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       179 g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v-~--~~~~~~~~-~~~l-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      +.++||.| +|++|.+.++.+...|+ .|+.+ +  +++++.+. .+++ +.+ +.    +..+....+.++.+. -+++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~r~~~~~~~~~~~~~~~~-~~----~~~~v~~~~~~~~~~-~g~i   73 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGY-TVVCHDASFADAAERQRFESENPGTI-AL----AEQKPERLVDATLQH-GEAI   73 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHSTTEE-EC----CCCCGGGHHHHHGGG-SSCE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCcCCHHHHHHHHHHhCCCc-cc----CHHHHHHHHHHHHHH-cCCC
Confidence            46789998 58999999998888999 67777 5  77766554 3444 322 11    234555555554432 2479


Q ss_pred             cEEEEccC
Q 018075          253 DVSFDCVG  260 (361)
Q Consensus       253 d~vld~~g  260 (361)
                      |+++++.|
T Consensus        74 D~lv~~Ag   81 (244)
T 1zmo_A           74 DTIVSNDY   81 (244)
T ss_dssp             EEEEECCC
T ss_pred             CEEEECCC
Confidence            99999887

>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}

Probab=95.40  E-value=0.2  Score=45.55  Aligned_cols=132  Identities=14%  Similarity=0.096  Sum_probs=79.3

Q ss_pred             CEEEEECCCHHHHHHHHHHHH--------cCCCEEEEEeCChhHH-HHHHHcCCCEEeecCCCccchhHHHHHHHhhcCC
Q 018075          180 TNVMIMGSGPIGLVTLLAARA--------FGAPRIIITDVDVQRL-SIARNLGADETAKVSTDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       180 ~~vlI~G~g~~G~~ai~la~~--------~g~~~vv~v~~~~~~~-~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (361)
                      =+|.|+|+|.+|..-+...+.        -+++.+.+++.++++. ++++++|.....      .++.+.+.      ..
T Consensus        26 irvgiIG~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y------~d~~ell~------~~   93 (393)
T 4fb5_A           26 LGIGLIGTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKAT------ADWRALIA------DP   93 (393)
T ss_dssp             CEEEEECCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEE------SCHHHHHH------CT
T ss_pred             ccEEEEcCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeec------CCHHHHhc------CC
Confidence            488999999999754332221        2454455556666654 567778876543      24433332      45


Q ss_pred             CccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechH----hhhcCcEEE-Eeec-CCCcHHHHHHHHHcCCC
Q 018075          251 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTP----AAAREVDVI-GIFR-YRSTWPLCIEFLRSGKI  324 (361)
Q Consensus       251 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~----~~~~~~~i~-~~~~-~~~~~~~~~~~l~~g~~  324 (361)
                      .+|+|+-|+....+.+.+..+|..|=. |++.-+.....-....    .-..++.+. +... +...++.+.+++++|.+
T Consensus        94 ~iDaV~IatP~~~H~~~a~~al~aGkh-Vl~EKPla~~~~ea~~l~~~a~~~g~~l~vg~~~R~~p~~~~~k~~i~~G~i  172 (393)
T 4fb5_A           94 EVDVVSVTTPNQFHAEMAIAALEAGKH-VWCEKPMAPAYADAERMLATAERSGKVAALGYNYIQNPVMRHIRKLVGDGVI  172 (393)
T ss_dssp             TCCEEEECSCGGGHHHHHHHHHHTTCE-EEECSCSCSSHHHHHHHHHHHHHSSSCEEECCGGGGCHHHHHHHHHHHTTTT
T ss_pred             CCcEEEECCChHHHHHHHHHHHhcCCe-EEEccCCcccHHHHHHhhhhHHhcCCccccccccccChHHHHHHHHHHcCCC
Confidence            799999999988899999999987544 5565332211111111    122333332 3222 25678889999999988

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=95.39  E-value=0.069  Score=45.69  Aligned_cols=34  Identities=26%  Similarity=0.508  Sum_probs=29.8

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075          179 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  212 (361)
Q Consensus       179 g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~  212 (361)
                      +.+|+|+|+|++|..++..+...|...+..+|.+
T Consensus        28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d   61 (251)
T 1zud_1           28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD   61 (251)
T ss_dssp             TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred             cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            4799999999999999999999999888887654

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=95.38  E-value=0.049  Score=46.41  Aligned_cols=82  Identities=23%  Similarity=0.250  Sum_probs=49.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCC-hhHHH-HHHH---cCCCE-EeecC-CCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVD-VQRLS-IARN---LGADE-TAKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~-~~~~~-~~~~---lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      .+.++||.| +|.+|.+.+..+...|+ .|+.++++ .++.+ ..++   .+... .+..+ .+..+..+.+.++.+.. 
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   83 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGA-KVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKF-   83 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            467899998 59999999998888999 57777776 54433 2222   23221 11111 22233334444433222 


Q ss_pred             CCccEEEEccCC
Q 018075          250 SGIDVSFDCVGF  261 (361)
Q Consensus       250 ~~~d~vld~~g~  261 (361)
                      +++|++|++.|.
T Consensus        84 g~id~vi~~Ag~   95 (258)
T 3afn_B           84 GGIDVLINNAGG   95 (258)
T ss_dssp             SSCSEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999999884

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=95.38  E-value=0.1  Score=45.05  Aligned_cols=82  Identities=15%  Similarity=0.193  Sum_probs=50.2

Q ss_pred             CCCEEEEEC-C--CHHHHHHHHHHHHcCCCEEEEEeCChh---HHHHH-HHcCCCEEeecC-CCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMG-S--GPIGLVTLLAARAFGAPRIIITDVDVQ---RLSIA-RNLGADETAKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G-~--g~~G~~ai~la~~~g~~~vv~v~~~~~---~~~~~-~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      .+.++||.| +  |++|.+.++.+...|+ .|+.++++.+   ..+.+ ++.+....+..+ .+..+..+.+.++.+. -
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~   82 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD-L   82 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH-T
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHH-c
Confidence            468899998 5  7999999998888999 5777777664   22222 223422222211 2223344444444332 2


Q ss_pred             CCccEEEEccCC
Q 018075          250 SGIDVSFDCVGF  261 (361)
Q Consensus       250 ~~~d~vld~~g~  261 (361)
                      +++|+++++.|.
T Consensus        83 g~id~lv~nAg~   94 (275)
T 2pd4_A           83 GSLDFIVHSVAF   94 (275)
T ss_dssp             SCEEEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            479999998873

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=95.37  E-value=0.078  Score=45.57  Aligned_cols=82  Identities=18%  Similarity=0.233  Sum_probs=49.6

Q ss_pred             CCCEEEEEC-C--CHHHHHHHHHHHHcCCCEEEEEeCCh---hHHHHH-HHcCCCEEeecC-CCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMG-S--GPIGLVTLLAARAFGAPRIIITDVDV---QRLSIA-RNLGADETAKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G-~--g~~G~~ai~la~~~g~~~vv~v~~~~---~~~~~~-~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      .+.++||.| +  |++|.+.++.+...|+ .|+.+++++   +..+.+ ++.+....+..+ .+..+..+.+.++.+. -
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~-~   85 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKV-W   85 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTT-C
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHH-c
Confidence            467899998 5  7999999998888999 577777765   222222 223422222222 2223333444444321 2


Q ss_pred             CCccEEEEccCC
Q 018075          250 SGIDVSFDCVGF  261 (361)
Q Consensus       250 ~~~d~vld~~g~  261 (361)
                      +++|+++++.|.
T Consensus        86 g~iD~lv~~Ag~   97 (265)
T 1qsg_A           86 PKFDGFVHSIGF   97 (265)
T ss_dssp             SSEEEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999998873

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=95.36  E-value=0.13  Score=45.76  Aligned_cols=80  Identities=24%  Similarity=0.292  Sum_probs=49.4

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCC-----hhHHHHH----HHcCCCE-EeecC-CCccchhHHHHHHHh
Q 018075          179 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVD-----VQRLSIA----RNLGADE-TAKVS-TDIEDVDTDVGKIQN  246 (361)
Q Consensus       179 g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~-----~~~~~~~----~~lg~~~-~~~~~-~~~~~~~~~~~~~~~  246 (361)
                      +.++||.| +|++|.+.++.+...|+ .|+++.++     .++.+.+    ++.+... .+..+ .+..++.+.+.++.+
T Consensus         5 ~k~vlVTGas~GIG~aia~~L~~~G~-~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~   83 (324)
T 3u9l_A            5 KKIILITGASSGFGRLTAEALAGAGH-RVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIG   83 (324)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            57889998 59999999999988999 56765543     3333332    2234321 12211 233444555555443


Q ss_pred             hcCCCccEEEEccC
Q 018075          247 AMGSGIDVSFDCVG  260 (361)
Q Consensus       247 ~~~~~~d~vld~~g  260 (361)
                      .. +++|+++++.|
T Consensus        84 ~~-g~iD~lVnnAG   96 (324)
T 3u9l_A           84 ED-GRIDVLIHNAG   96 (324)
T ss_dssp             HH-SCCSEEEECCC
T ss_pred             Hc-CCCCEEEECCC
Confidence            22 47999999988

>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}

Probab=95.34  E-value=0.053  Score=47.12  Aligned_cols=96  Identities=20%  Similarity=0.307  Sum_probs=63.8

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc----CC-CEEeecCCCccchhHHHHHHHhhcCCC
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GA-DETAKVSTDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (361)
                      .++.+||-+|||. |..+..+++. |. .+++++.+++..+.+++.    |. ..+.....   +..+.    .......
T Consensus        67 ~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~---d~~~~----~~~~~~~  136 (285)
T 4htf_A           67 PQKLRVLDAGGGE-GQTAIKMAER-GH-QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHC---AAQDV----ASHLETP  136 (285)
T ss_dssp             SSCCEEEEETCTT-CHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEES---CGGGT----GGGCSSC
T ss_pred             CCCCEEEEeCCcc-hHHHHHHHHC-CC-EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEc---CHHHh----hhhcCCC
Confidence            3478999999876 7778888876 77 799999999887777653    32 11111111   21111    1112467


Q ss_pred             ccEEEEccC-----C-hHHHHHHHHhhcCCCEEEEEc
Q 018075          252 IDVSFDCVG-----F-DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       252 ~d~vld~~g-----~-~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ||+|+....     . ...++.+.+.|+|||+++...
T Consensus       137 fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~  173 (285)
T 4htf_A          137 VDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMF  173 (285)
T ss_dssp             EEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             ceEEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEE
Confidence            999987432     1 247888999999999998764

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=95.34  E-value=0.17  Score=43.79  Aligned_cols=85  Identities=18%  Similarity=0.168  Sum_probs=58.7

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccC
Q 018075          181 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG  260 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  260 (361)
                      +|.|+|+|.+|.+.+..+...|. .|++.++++++.+.+.+.|..... . .   +..       . . .+.|+||-++.
T Consensus         2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~~~-~-~---~~~-------~-~-~~~D~vi~av~   66 (279)
T 2f1k_A            2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQLVDEA-G-Q---DLS-------L-L-QTAKIIFLCTP   66 (279)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTSCSEE-E-S---CGG-------G-G-TTCSEEEECSC
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhCCCCccc-c-C---CHH-------H-h-CCCCEEEEECC
Confidence            68899999999999998888898 688889999888888777753111 0 1   111       1 1 46899999998


Q ss_pred             ChHHHHHHHH----hhcCCCEEEEE
Q 018075          261 FDKTMSTALN----ATRPGGKVCLI  281 (361)
Q Consensus       261 ~~~~~~~~~~----~l~~~G~~v~~  281 (361)
                      .. .....++    .++++..++.+
T Consensus        67 ~~-~~~~~~~~l~~~~~~~~~vv~~   90 (279)
T 2f1k_A           67 IQ-LILPTLEKLIPHLSPTAIVTDV   90 (279)
T ss_dssp             HH-HHHHHHHHHGGGSCTTCEEEEC
T ss_pred             HH-HHHHHHHHHHhhCCCCCEEEEC
Confidence            54 4444443    45566666555

>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}

Probab=95.33  E-value=0.18  Score=45.44  Aligned_cols=131  Identities=11%  Similarity=0.055  Sum_probs=82.3

Q ss_pred             CEEEEECCCHHHHHHHHHHHHc-CCCEEEEEeCChhHHH-HHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          180 TNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       180 ~~vlI~G~g~~G~~ai~la~~~-g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      -+|.|+|+|.+|...+..++.. +++.+.+.+.++++.+ +++++|+..   +    .++.+.+.      ...+|+|+.
T Consensus         6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~---~----~~~~~~l~------~~~~D~V~i   72 (354)
T 3db2_A            6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAG---D----ATMEALLA------REDVEMVII   72 (354)
T ss_dssp             EEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCC---C----SSHHHHHH------CSSCCEEEE
T ss_pred             ceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCC---c----CCHHHHhc------CCCCCEEEE
Confidence            4789999999998877766665 6744556677777655 456677643   2    23333321      357999999


Q ss_pred             ccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechH----hhhcCcEE-EEeec-CCCcHHHHHHHHHcCCC
Q 018075          258 CVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTP----AAAREVDV-IGIFR-YRSTWPLCIEFLRSGKI  324 (361)
Q Consensus       258 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~----~~~~~~~i-~~~~~-~~~~~~~~~~~l~~g~~  324 (361)
                      |+....+.+.+..+|..|-.++ +.-+.....-....    .-.+++.+ .+... +...++.+.+++++|.+
T Consensus        73 ~tp~~~h~~~~~~al~~gk~vl-~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~~~R~~p~~~~~k~~i~~g~i  144 (354)
T 3db2_A           73 TVPNDKHAEVIEQCARSGKHIY-VEKPISVSLDHAQRIDQVIKETGVKFLCGHSSRRLGALRKMKEMIDTKEI  144 (354)
T ss_dssp             CSCTTSHHHHHHHHHHTTCEEE-EESSSCSSHHHHHHHHHHHHHHCCCEEEECGGGGSHHHHHHHHHHHTTTT
T ss_pred             eCChHHHHHHHHHHHHcCCEEE-EccCCCCCHHHHHHHHHHHHHcCCeEEEeechhcCHHHHHHHHHHhcCCC
Confidence            9998888888888888876544 44322111111111    11223333 33322 26678889999999988

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=95.33  E-value=0.1  Score=45.03  Aligned_cols=82  Identities=13%  Similarity=0.086  Sum_probs=50.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeC-ChhHHHH-HHHc----CCCE-EeecC-CCc----cchhHHHHHH
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDV-DVQRLSI-ARNL----GADE-TAKVS-TDI----EDVDTDVGKI  244 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~-~~~~~~~-~~~l----g~~~-~~~~~-~~~----~~~~~~~~~~  244 (361)
                      .+.++||.| +|++|.+.+..+...|+ .|+.+++ ++++.+. ++++    +... .+..+ .+.    .+....+.++
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   88 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCS   88 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHH
Confidence            467899998 69999999998888999 6777777 7665443 2322    4321 12111 222    2333344333


Q ss_pred             HhhcCCCccEEEEccCC
Q 018075          245 QNAMGSGIDVSFDCVGF  261 (361)
Q Consensus       245 ~~~~~~~~d~vld~~g~  261 (361)
                      .+.. +++|+++++.|.
T Consensus        89 ~~~~-g~id~lv~nAg~  104 (276)
T 1mxh_A           89 FRAF-GRCDVLVNNASA  104 (276)
T ss_dssp             HHHH-SCCCEEEECCCC
T ss_pred             HHhc-CCCCEEEECCCC
Confidence            3222 479999999873

>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}

Probab=95.32  E-value=0.11  Score=45.51  Aligned_cols=105  Identities=13%  Similarity=0.095  Sum_probs=61.4

Q ss_pred             HHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhc
Q 018075          170 ACRRANVG-PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       170 ~l~~~~~~-~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      ++....+. +|.+||=+|||. |.++..+++. |+..|+++|.+++-.+.+.+-..........+-.....  ..+   .
T Consensus        76 ~l~~~~~~~~g~~vLDiGcGT-G~~t~~L~~~-ga~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~--~~l---~  148 (291)
T 3hp7_A           76 ALAVFNLSVEDMITIDIGAST-GGFTDVMLQN-GAKLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEP--VDF---T  148 (291)
T ss_dssp             HHHHTTCCCTTCEEEEETCTT-SHHHHHHHHT-TCSEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCG--GGC---T
T ss_pred             HHHhcCCCccccEEEecCCCc-cHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhCcccceecccCceecch--hhC---C
Confidence            34554554 577888899876 6666666665 77789999999876655322222111110011001100  001   1


Q ss_pred             CCCccEEEEccC---ChHHHHHHHHhhcCCCEEEEE
Q 018075          249 GSGIDVSFDCVG---FDKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       249 ~~~~d~vld~~g---~~~~~~~~~~~l~~~G~~v~~  281 (361)
                      ...||++.-.+.   -...+..+.+.|+|||+++.+
T Consensus       149 ~~~fD~v~~d~sf~sl~~vL~e~~rvLkpGG~lv~l  184 (291)
T 3hp7_A          149 EGLPSFASIDVSFISLNLILPALAKILVDGGQVVAL  184 (291)
T ss_dssp             TCCCSEEEECCSSSCGGGTHHHHHHHSCTTCEEEEE
T ss_pred             CCCCCEEEEEeeHhhHHHHHHHHHHHcCcCCEEEEE
Confidence            223887754322   234789999999999999986

>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}

Probab=95.30  E-value=0.05  Score=46.68  Aligned_cols=99  Identities=14%  Similarity=0.142  Sum_probs=66.3

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCC
Q 018075          172 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       172 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (361)
                      +....+++.+||-+|||. |..+..+++ .+. .|++++.++...+.+++..--..+.  .+..++.        .....
T Consensus        28 ~~~~~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~gvD~s~~~~~~a~~~~~~~~~~--~d~~~~~--------~~~~~   94 (261)
T 3ege_A           28 NLLNLPKGSVIADIGAGT-GGYSVALAN-QGL-FVYAVEPSIVMRQQAVVHPQVEWFT--GYAENLA--------LPDKS   94 (261)
T ss_dssp             HHHCCCTTCEEEEETCTT-SHHHHHHHT-TTC-EEEEECSCHHHHHSSCCCTTEEEEC--CCTTSCC--------SCTTC
T ss_pred             HHhCCCCCCEEEEEcCcc-cHHHHHHHh-CCC-EEEEEeCCHHHHHHHHhccCCEEEE--CchhhCC--------CCCCC
Confidence            445678999999999876 778888887 666 7999999987776554433111111  1111110        12367


Q ss_pred             ccEEEEccCC------hHHHHHHHHhhcCCCEEEEEccC
Q 018075          252 IDVSFDCVGF------DKTMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       252 ~d~vld~~g~------~~~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      ||+|+....-      ...++.+.+.|+ ||+++.....
T Consensus        95 fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~  132 (261)
T 3ege_A           95 VDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTFD  132 (261)
T ss_dssp             BSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEEC
T ss_pred             EeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEcC
Confidence            9999875421      246888999999 9988877643

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=95.30  E-value=0.085  Score=46.89  Aligned_cols=90  Identities=17%  Similarity=0.089  Sum_probs=64.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeC-ChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDV-DVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  256 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~-~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  256 (361)
                      .|.+|.|+|.|.+|...++.++..|. .|++.++ +.++ +.+.++|+..    .   .++.+.+        ...|+|+
T Consensus       145 ~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~~g~~~----~---~~l~ell--------~~aDvVi  207 (320)
T 1gdh_A          145 DNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRASS-SDEASYQATF----H---DSLDSLL--------SVSQFFS  207 (320)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCCH-HHHHHHTCEE----C---SSHHHHH--------HHCSEEE
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcCh-hhhhhcCcEE----c---CCHHHHH--------hhCCEEE
Confidence            57899999999999999999999998 6888888 6665 3556677632    1   1222222        2589999


Q ss_pred             EccCChH----HH-HHHHHhhcCCCEEEEEccC
Q 018075          257 DCVGFDK----TM-STALNATRPGGKVCLIGLA  284 (361)
Q Consensus       257 d~~g~~~----~~-~~~~~~l~~~G~~v~~g~~  284 (361)
                      .++....    .+ ...+..|++++.++.++..
T Consensus       208 l~~p~~~~t~~~i~~~~l~~mk~gailIn~arg  240 (320)
T 1gdh_A          208 LNAPSTPETRYFFNKATIKSLPQGAIVVNTARG  240 (320)
T ss_dssp             ECCCCCTTTTTCBSHHHHTTSCTTEEEEECSCG
T ss_pred             EeccCchHHHhhcCHHHHhhCCCCcEEEECCCC
Confidence            9877432    11 3467888999888877653

>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A

Probab=95.30  E-value=0.1  Score=43.22  Aligned_cols=97  Identities=18%  Similarity=0.090  Sum_probs=62.5

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCC----------C-EEeecCCCccchhHHHH
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA----------D-ETAKVSTDIEDVDTDVG  242 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~----------~-~~~~~~~~~~~~~~~~~  242 (361)
                      ....++.+||-+|||. |..+..+++..+...+++++.+++..+.+++.-.          . ..+.  .+.....    
T Consensus        25 l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~--~d~~~~~----   97 (219)
T 3jwg_A           25 LKSVNAKKVIDLGCGE-GNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQ--SSLVYRD----   97 (219)
T ss_dssp             HHHTTCCEEEEETCTT-CHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEE--CCSSSCC----
T ss_pred             HhhcCCCEEEEecCCC-CHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEe--Ccccccc----
Confidence            3346788999999876 7777788776654489999999998888776311          1 1111  1111110    


Q ss_pred             HHHhhcCCCccEEEEcc-----CCh---HHHHHHHHhhcCCCEEEEE
Q 018075          243 KIQNAMGSGIDVSFDCV-----GFD---KTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       243 ~~~~~~~~~~d~vld~~-----g~~---~~~~~~~~~l~~~G~~v~~  281 (361)
                          .....||+|+...     ..+   ..++.+.+.|+|||.++..
T Consensus        98 ----~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~  140 (219)
T 3jwg_A           98 ----KRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVST  140 (219)
T ss_dssp             ----GGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEE
T ss_pred             ----cccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEc
Confidence                0135799998632     211   4677788999999976654

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=95.30  E-value=0.043  Score=47.00  Aligned_cols=79  Identities=19%  Similarity=0.362  Sum_probs=48.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCE-EeecC-CCccchhHHHHHHHhhcCCCccE
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGIDV  254 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~d~  254 (361)
                      .+.++||.| ++++|.+.++.+...|+ .|+.++++.+  +..++++... .+..+ .+.++....+..+.+  -+++|+
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~--~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~--~g~id~   82 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGA-QVVVLDIRGE--DVVADLGDRARFAAADVTDEAAVASALDLAET--MGTLRI   82 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCH--HHHHHTCTTEEEEECCTTCHHHHHHHHHHHHH--HSCEEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCchH--HHHHhcCCceEEEECCCCCHHHHHHHHHHHHH--hCCCCE
Confidence            467899998 59999999998888899 5777766543  3344555332 12111 222333344433332  247999


Q ss_pred             EEEccCC
Q 018075          255 SFDCVGF  261 (361)
Q Consensus       255 vld~~g~  261 (361)
                      ++++.|.
T Consensus        83 lv~nAg~   89 (257)
T 3tl3_A           83 VVNCAGT   89 (257)
T ss_dssp             EEECGGG
T ss_pred             EEECCCC
Confidence            9999883

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=95.29  E-value=0.094  Score=44.57  Aligned_cols=82  Identities=15%  Similarity=0.248  Sum_probs=50.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-H---HcCCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-R---NLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~---~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.+++++++.+.+ +   +.+... .+..+ .+..++.+.+.++.+. ..
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~~   87 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK-LG   87 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-HS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHh-cC
Confidence            568899998 59999999998888899 688888887654422 2   234321 11111 1222333333333222 24


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|+++++.|.
T Consensus        88 ~~d~vi~~Ag~   98 (255)
T 1fmc_A           88 KVDILVNNAGG   98 (255)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=95.28  E-value=0.11  Score=44.48  Aligned_cols=82  Identities=17%  Similarity=0.332  Sum_probs=49.9

Q ss_pred             CCCEEEEEC-C--CHHHHHHHHHHHHcCCCEEEEEeCChh---HHHHH-HHcCCCEEeecC-CCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMG-S--GPIGLVTLLAARAFGAPRIIITDVDVQ---RLSIA-RNLGADETAKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G-~--g~~G~~ai~la~~~g~~~vv~v~~~~~---~~~~~-~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      .+.++||.| +  |++|.+.++.+...|+ .|+.++++++   ..+.+ ++.+....+..+ .+..+..+.+.++.+.. 
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-   84 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF-   84 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHc-
Confidence            467899998 5  7999999998888899 5777777764   22222 223422222222 22233334444433222 


Q ss_pred             CCccEEEEccCC
Q 018075          250 SGIDVSFDCVGF  261 (361)
Q Consensus       250 ~~~d~vld~~g~  261 (361)
                      +++|+++++.|.
T Consensus        85 g~iD~lv~~Ag~   96 (261)
T 2wyu_A           85 GGLDYLVHAIAF   96 (261)
T ss_dssp             SSEEEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            479999998873

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=95.27  E-value=0.081  Score=47.66  Aligned_cols=92  Identities=17%  Similarity=0.233  Sum_probs=63.2

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          177 GPETNVMIMGSGPIGLVTLLAAR-AFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~-~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      -.|.+|.|+|.|.+|...++.++ ..|. .|++.+++.++.+.+.++|....       .++.+.+        ...|+|
T Consensus       161 l~g~~vgIIG~G~IG~~vA~~l~~~~G~-~V~~~d~~~~~~~~~~~~g~~~~-------~~l~ell--------~~aDvV  224 (348)
T 2w2k_A          161 PRGHVLGAVGLGAIQKEIARKAVHGLGM-KLVYYDVAPADAETEKALGAERV-------DSLEELA--------RRSDCV  224 (348)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTCC-EEEEECSSCCCHHHHHHHTCEEC-------SSHHHHH--------HHCSEE
T ss_pred             CCCCEEEEEEECHHHHHHHHHHHHhcCC-EEEEECCCCcchhhHhhcCcEEe-------CCHHHHh--------ccCCEE
Confidence            35789999999999999999999 9999 68888887766665666665421       1222222        247888


Q ss_pred             EEccCChH----HH-HHHHHhhcCCCEEEEEccC
Q 018075          256 FDCVGFDK----TM-STALNATRPGGKVCLIGLA  284 (361)
Q Consensus       256 ld~~g~~~----~~-~~~~~~l~~~G~~v~~g~~  284 (361)
                      +.++....    .+ ...+..|+++..++.++..
T Consensus       225 il~vp~~~~t~~li~~~~l~~mk~gailin~srg  258 (348)
T 2w2k_A          225 SVSVPYMKLTHHLIDEAFFAAMKPGSRIVNTARG  258 (348)
T ss_dssp             EECCCCSGGGTTCBCHHHHHHSCTTEEEEECSCG
T ss_pred             EEeCCCChHHHHHhhHHHHhcCCCCCEEEECCCC
Confidence            88876432    11 3466778888777665443

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=95.25  E-value=0.075  Score=46.10  Aligned_cols=78  Identities=18%  Similarity=0.248  Sum_probs=51.1

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HHHcCCCE-EeecC-CCccchhHHHHHHHhhcCCCcc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      .|.++||.| +|++|.+.++.+...|+ .|+.++++.++.+. .++++... .+..+ .+..+..+.+.++ . .-.++|
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~-~-~~~~id  105 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGL-GVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAA-N-QLGRLR  105 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHH-T-TSSEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHH-H-HhCCCC
Confidence            578899998 59999999998888999 68888888876554 44555432 22211 2223344444433 1 134789


Q ss_pred             EEEEc
Q 018075          254 VSFDC  258 (361)
Q Consensus       254 ~vld~  258 (361)
                      +++.+
T Consensus       106 ~lv~~  110 (281)
T 3ppi_A          106 YAVVA  110 (281)
T ss_dssp             EEEEC
T ss_pred             eEEEc
Confidence            99988

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=95.25  E-value=0.055  Score=50.41  Aligned_cols=104  Identities=12%  Similarity=0.124  Sum_probs=68.2

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHH-cCCC--EEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCC
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARA-FGAP--RIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~-~g~~--~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (361)
                      .+....+|||+|+|++|.+++.++.. .+..  .|+.++..+.+.++.+.+|.... ...-+..+..+.+..+.   ..+
T Consensus         9 ~~~~~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g~~~~-~~~Vdadnv~~~l~aLl---~~~   84 (480)
T 2ph5_A            9 KILFKNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGVSFK-LQQITPQNYLEVIGSTL---EEN   84 (480)
T ss_dssp             CBCCCSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHTCEEE-ECCCCTTTHHHHTGGGC---CTT
T ss_pred             eecCCCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcCCcee-EEeccchhHHHHHHHHh---cCC
Confidence            45566789999999999999986655 4442  57777777666666677775332 22222233333333222   234


Q ss_pred             ccEEEEccCChHHHHHHHHhhcCCCEEEEEcc
Q 018075          252 IDVSFDCVGFDKTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       252 ~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~  283 (361)
                       |+|++++-....+.-+-.|+..|-.++....
T Consensus        85 -DvVIN~s~~~~~l~Im~acleaGv~YlDTa~  115 (480)
T 2ph5_A           85 -DFLIDVSIGISSLALIILCNQKGALYINAAT  115 (480)
T ss_dssp             -CEEEECCSSSCHHHHHHHHHHHTCEEEESSC
T ss_pred             -CEEEECCccccCHHHHHHHHHcCCCEEECCC
Confidence             9999977655567777788888988888753

>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}

Probab=95.23  E-value=0.13  Score=43.04  Aligned_cols=98  Identities=14%  Similarity=0.247  Sum_probs=66.4

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEeCChhHHHHHHHcCCC--EEeecCCCccchhHHHHHHHhhcCCCc
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARNLGAD--ETAKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      ..++.+||-+|||. |..+..+++.. +. .+++++.+++..+.+++.-..  .+.....   +..+    +.  ....+
T Consensus        42 ~~~~~~vLDiG~G~-G~~~~~l~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~---d~~~----~~--~~~~f  110 (234)
T 3dtn_A           42 DTENPDILDLGAGT-GLLSAFLMEKYPEA-TFTLVDMSEKMLEIAKNRFRGNLKVKYIEA---DYSK----YD--FEEKY  110 (234)
T ss_dssp             SCSSCEEEEETCTT-SHHHHHHHHHCTTC-EEEEEESCHHHHHHHHHHTCSCTTEEEEES---CTTT----CC--CCSCE
T ss_pred             CCCCCeEEEecCCC-CHHHHHHHHhCCCC-eEEEEECCHHHHHHHHHhhccCCCEEEEeC---chhc----cC--CCCCc
Confidence            57889999999876 77888888887 55 799999999988887764221  1111111   1111    00  12579


Q ss_pred             cEEEEcc-----CCh---HHHHHHHHhhcCCCEEEEEccC
Q 018075          253 DVSFDCV-----GFD---KTMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       253 d~vld~~-----g~~---~~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      |+|+...     ..+   ..++.+.+.|+|||+++.....
T Consensus       111 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~  150 (234)
T 3dtn_A          111 DMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLV  150 (234)
T ss_dssp             EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred             eEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence            9998753     211   2678899999999999987533

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=95.23  E-value=0.14  Score=44.56  Aligned_cols=82  Identities=12%  Similarity=0.169  Sum_probs=50.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HHHc---CCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNL---GADE-TAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~l---g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      .+.++||.| +|++|.+.+..+...|+ .|+.+++++++.+. .+++   +... .+..+ .+.+++.+.+.++.+. ..
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~-~~  120 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTE-HK  120 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH-CS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHh-cC
Confidence            467899998 59999999998888898 56767777665443 2222   4332 11111 2223344444433322 34


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|++|++.|.
T Consensus       121 ~id~li~~Ag~  131 (285)
T 2c07_A          121 NVDILVNNAGI  131 (285)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999998874

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=95.22  E-value=0.062  Score=45.77  Aligned_cols=77  Identities=21%  Similarity=0.256  Sum_probs=49.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEE-eecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.++++.+.    ++.+...+ .++ .+..+..+.+.++.+. -+++|++
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~----~~~~~~~~~~D~-~d~~~~~~~~~~~~~~-~g~id~l   78 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGA-KVTGFDQAFTQ----EQYPFATEVMDV-ADAAQVAQVCQRLLAE-TERLDAL   78 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCCCS----SCCSSEEEECCT-TCHHHHHHHHHHHHHH-CSCCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCchhh----hcCCceEEEcCC-CCHHHHHHHHHHHHHH-cCCCCEE
Confidence            467899998 59999999998888999 67777776542    22332211 122 2223344444444332 3479999


Q ss_pred             EEccCC
Q 018075          256 FDCVGF  261 (361)
Q Consensus       256 ld~~g~  261 (361)
                      +++.|.
T Consensus        79 v~~Ag~   84 (250)
T 2fwm_X           79 VNAAGI   84 (250)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999874

>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}

Probab=95.21  E-value=0.058  Score=45.67  Aligned_cols=100  Identities=14%  Similarity=0.120  Sum_probs=63.1

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----------cCCCEEeecCCCccchhHHHHHHH
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----------LGADETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----------lg~~~~~~~~~~~~~~~~~~~~~~  245 (361)
                      ..++.+||=+|||. |..++.+|+......+++++.+++..+.+++          .+...+.....   +..+.+... 
T Consensus        44 ~~~~~~vLDiGcG~-G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~---d~~~~l~~~-  118 (235)
T 3ckk_A           44 AQAQVEFADIGCGY-GGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRS---NAMKHLPNF-  118 (235)
T ss_dssp             --CCEEEEEETCTT-CHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEEC---CTTTCHHHH-
T ss_pred             cCCCCeEEEEccCC-cHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEEC---cHHHhhhhh-
Confidence            34566777789886 8888899988754479999999987766543          13332222122   221112111 


Q ss_pred             hhcCCCccEEEEccCCh--------------HHHHHHHHhhcCCCEEEEE
Q 018075          246 NAMGSGIDVSFDCVGFD--------------KTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       246 ~~~~~~~d~vld~~g~~--------------~~~~~~~~~l~~~G~~v~~  281 (361)
                       .....+|.|+-....+              ..++.+.+.|+|||++++.
T Consensus       119 -~~~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~  167 (235)
T 3ckk_A          119 -FYKGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTI  167 (235)
T ss_dssp             -CCTTCEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEE
T ss_pred             -CCCcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEE
Confidence             1245689887654432              4788899999999999875

>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A

Probab=95.21  E-value=0.066  Score=48.90  Aligned_cols=103  Identities=19%  Similarity=0.239  Sum_probs=66.7

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEEeCChhHHHHHHHc---------C-C--CEEeecCCCccchhHHH
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAF--GAPRIIITDVDVQRLSIARNL---------G-A--DETAKVSTDIEDVDTDV  241 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~--g~~~vv~v~~~~~~~~~~~~l---------g-~--~~~~~~~~~~~~~~~~~  241 (361)
                      +.++.+||-+|+|. |..+..+++..  +. .|++++.+++..+.+++.         | .  ..+.-...+..++....
T Consensus        81 ~~~~~~VLDlGcG~-G~~~~~la~~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~  158 (383)
T 4fsd_A           81 SLEGATVLDLGCGT-GRDVYLASKLVGEHG-KVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAE  158 (383)
T ss_dssp             GGTTCEEEEESCTT-SHHHHHHHHHHTTTC-EEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCB
T ss_pred             CCCCCEEEEecCcc-CHHHHHHHHHhCCCC-EEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcc
Confidence            57899999999887 88888888885  44 799999999988887764         3 1  12111111111110000


Q ss_pred             HHHHhhcCCCccEEEEccC------ChHHHHHHHHhhcCCCEEEEEc
Q 018075          242 GKIQNAMGSGIDVSFDCVG------FDKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       242 ~~~~~~~~~~~d~vld~~g------~~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      .  .......||+|+....      ....++.+.+.|+|||+++...
T Consensus       159 ~--~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~  203 (383)
T 4fsd_A          159 P--EGVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSD  203 (383)
T ss_dssp             S--CCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             c--CCCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEE
Confidence            0  0012357999987442      1246788999999999998865

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=95.21  E-value=0.089  Score=45.94  Aligned_cols=75  Identities=13%  Similarity=0.279  Sum_probs=49.4

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHc----CCCE-EeecCCCccchhHHHHHHHhhcC
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNL----GADE-TAKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~l----g~~~-~~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      -+|.++||.| +|++|.+++..+...|+ .|+.++++.++.+ +++++    +... ..+..    +. +.+.+.    -
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~-~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~----~~-~~~~~~----~  186 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETA----DD-ASRAEA----V  186 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECC----SH-HHHHHH----T
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEecCC----CH-HHHHHH----H
Confidence            4688999999 79999999999999999 4888888877654 33333    2221 12221    11 122222    2


Q ss_pred             CCccEEEEccCC
Q 018075          250 SGIDVSFDCVGF  261 (361)
Q Consensus       250 ~~~d~vld~~g~  261 (361)
                      ..+|+++++.|.
T Consensus       187 ~~~DvlVn~ag~  198 (287)
T 1lu9_A          187 KGAHFVFTAGAI  198 (287)
T ss_dssp             TTCSEEEECCCT
T ss_pred             HhCCEEEECCCc
Confidence            358999999963

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=95.20  E-value=0.11  Score=46.40  Aligned_cols=81  Identities=12%  Similarity=0.074  Sum_probs=51.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEe-CChhHHHHH-HH----cCCCE-E--eecCCCcc------------
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITD-VDVQRLSIA-RN----LGADE-T--AKVSTDIE------------  235 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~-~~~~~~~~~-~~----lg~~~-~--~~~~~~~~------------  235 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.++ +++++.+.+ ++    .+... .  .++. +..            
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~-~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~-d~~~~~~~~~~~~~~  122 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANALSATLNARRPNSAITVQADLS-NVATAPVSGADGSAP  122 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCS-SSCBCC-------CC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCC-Cchhccccccccccc
Confidence            467899998 69999999999888999 677777 777655433 22    23221 1  2222 223            


Q ss_pred             -----chhHHHHHHHhhcCCCccEEEEccCC
Q 018075          236 -----DVDTDVGKIQNAMGSGIDVSFDCVGF  261 (361)
Q Consensus       236 -----~~~~~~~~~~~~~~~~~d~vld~~g~  261 (361)
                           ++.+.+.++.+.. +++|+++++.|.
T Consensus       123 ~~~~~~v~~~~~~~~~~~-g~iD~lVnnAG~  152 (328)
T 2qhx_A          123 VTLFTRCAELVAACYTHW-GRCDVLVNNASS  152 (328)
T ss_dssp             BCHHHHHHHHHHHHHHHH-SCCCEEEECCCC
T ss_pred             cccHHHHHHHHHHHHHhc-CCCCEEEECCCC
Confidence                 3444444443322 479999999874

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=95.19  E-value=0.089  Score=46.99  Aligned_cols=90  Identities=14%  Similarity=0.126  Sum_probs=62.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      .|.+|.|+|.|.+|...++.++..|. .|++.+++.++.+.+.++|....        ++.+.+        ...|+|+.
T Consensus       154 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~~~--------~l~e~l--------~~aDvVi~  216 (330)
T 2gcg_A          154 TQSTVGIIGLGRIGQAIARRLKPFGV-QRFLYTGRQPRPEEAAEFQAEFV--------STPELA--------AQSDFIVV  216 (330)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-CEEEEESSSCCHHHHHTTTCEEC--------CHHHHH--------HHCSEEEE
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcchhHHHhcCceeC--------CHHHHH--------hhCCEEEE
Confidence            47799999999999999999999999 57888877665555565654321        222222        25799999


Q ss_pred             ccCChH----HH-HHHHHhhcCCCEEEEEccC
Q 018075          258 CVGFDK----TM-STALNATRPGGKVCLIGLA  284 (361)
Q Consensus       258 ~~g~~~----~~-~~~~~~l~~~G~~v~~g~~  284 (361)
                      ++....    .+ ...+..|+++..++.++..
T Consensus       217 ~vp~~~~t~~~i~~~~~~~mk~gailIn~srg  248 (330)
T 2gcg_A          217 ACSLTPATEGLCNKDFFQKMKETAVFINISRG  248 (330)
T ss_dssp             CCCCCTTTTTCBSHHHHHHSCTTCEEEECSCG
T ss_pred             eCCCChHHHHhhCHHHHhcCCCCcEEEECCCC
Confidence            886431    12 4567788888877766543

>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43

Probab=95.19  E-value=0.12  Score=43.76  Aligned_cols=95  Identities=23%  Similarity=0.271  Sum_probs=61.9

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc----CCC-EEeecCCCccchhHHHHHHHh
Q 018075          172 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GAD-ETAKVSTDIEDVDTDVGKIQN  246 (361)
Q Consensus       172 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~-~~~~~~~~~~~~~~~~~~~~~  246 (361)
                      .....+++.+||-+|||. |..+..+++. |. .+++++.+++..+.+++.    +.. ..+.     .+..+    +. 
T Consensus        35 ~~~~~~~~~~vLDlGcG~-G~~~~~l~~~-~~-~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~-----~d~~~----~~-  101 (252)
T 1wzn_A           35 KEDAKREVRRVLDLACGT-GIPTLELAER-GY-EVVGLDLHEEMLRVARRKAKERNLKIEFLQ-----GDVLE----IA-  101 (252)
T ss_dssp             HHTCSSCCCEEEEETCTT-CHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEE-----SCGGG----CC-
T ss_pred             HHhcccCCCEEEEeCCCC-CHHHHHHHHC-CC-eEEEEECCHHHHHHHHHHHHhcCCceEEEE-----CChhh----cc-
Confidence            334457889999999876 7777777775 77 799999999887776542    321 1111     12111    10 


Q ss_pred             hcCCCccEEEEccCC---------hHHHHHHHHhhcCCCEEEE
Q 018075          247 AMGSGIDVSFDCVGF---------DKTMSTALNATRPGGKVCL  280 (361)
Q Consensus       247 ~~~~~~d~vld~~g~---------~~~~~~~~~~l~~~G~~v~  280 (361)
                       ....+|+|+...+.         ...++.+.+.|+|||.++.
T Consensus       102 -~~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~  143 (252)
T 1wzn_A          102 -FKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFIT  143 (252)
T ss_dssp             -CCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             -cCCCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEE
Confidence             13579999864221         1356777889999999875

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=95.19  E-value=0.15  Score=44.40  Aligned_cols=82  Identities=18%  Similarity=0.230  Sum_probs=50.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCC----------------hhHHHHH----HHcCCCE-EeecC-CCc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVD----------------VQRLSIA----RNLGADE-TAKVS-TDI  234 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~----------------~~~~~~~----~~lg~~~-~~~~~-~~~  234 (361)
                      .|.++||.| ++++|.+.++.+...|+ .|+.++++                .++.+.+    ++.+... .+..+ .+.
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   88 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGA-DIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDY   88 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCH
Confidence            578999998 58999999998888999 57777665                3433322    2233322 11111 223


Q ss_pred             cchhHHHHHHHhhcCCCccEEEEccCC
Q 018075          235 EDVDTDVGKIQNAMGSGIDVSFDCVGF  261 (361)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~d~vld~~g~  261 (361)
                      .+..+.+.++.+.. +++|+++++.|.
T Consensus        89 ~~v~~~~~~~~~~~-g~id~lv~nAg~  114 (286)
T 3uve_A           89 DALKAAVDSGVEQL-GRLDIIVANAGI  114 (286)
T ss_dssp             HHHHHHHHHHHHHH-SCCCEEEECCCC
T ss_pred             HHHHHHHHHHHHHh-CCCCEEEECCcc
Confidence            34444444443322 479999999874

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=95.18  E-value=0.034  Score=46.24  Aligned_cols=95  Identities=15%  Similarity=0.208  Sum_probs=57.6

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEcc
Q 018075          181 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV  259 (361)
Q Consensus       181 ~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  259 (361)
                      +|||.| +|.+|...++.+...|. .|++++++.++.+..  .+. ..+..  +-.+..+.+.+.    -.++|+||++.
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~--~~~-~~~~~--D~~d~~~~~~~~----~~~~d~vi~~a   71 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDY-QIYAGARKVEQVPQY--NNV-KAVHF--DVDWTPEEMAKQ----LHGMDAIINVS   71 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSC-EEEEEESSGGGSCCC--TTE-EEEEC--CTTSCHHHHHTT----TTTCSEEEECC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCccchhhc--CCc-eEEEe--cccCCHHHHHHH----HcCCCEEEECC
Confidence            689998 69999999999988998 688888887654322  122 12221  112201222222    24799999999


Q ss_pred             CChH---------HHHHHHHhhcC--CCEEEEEccCC
Q 018075          260 GFDK---------TMSTALNATRP--GGKVCLIGLAK  285 (361)
Q Consensus       260 g~~~---------~~~~~~~~l~~--~G~~v~~g~~~  285 (361)
                      +...         ....+++.+..  .++++.++...
T Consensus        72 g~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~  108 (219)
T 3dqp_A           72 GSGGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIF  108 (219)
T ss_dssp             CCTTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred             cCCCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECccc
Confidence            8541         13334444432  35888887543

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=95.17  E-value=0.25  Score=48.04  Aligned_cols=103  Identities=17%  Similarity=0.219  Sum_probs=62.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCh---------hHHH----HHHHcCCCEEeecCCCccchhHHHHH
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDV---------QRLS----IARNLGADETAKVSTDIEDVDTDVGK  243 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~---------~~~~----~~~~lg~~~~~~~~~~~~~~~~~~~~  243 (361)
                      .|..+||.| ++++|.+.++.+...|+ .|+.++.+.         ++.+    .+++.|...+.+. .+..+....+.+
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga-~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~-~d~~~~~~~v~~   84 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGA-KVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADY-NNVLDGDKIVET   84 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECC-----------CHHHHHHHHHHHTTCEEEEEC-CCTTCHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEc-CCHHHHHHHHHH
Confidence            467888888 58999999999989999 577776543         2222    2233354334443 233344444444


Q ss_pred             HHhhcCCCccEEEEccCCh-------------------------HHHHHHHHhhc--CCCEEEEEcc
Q 018075          244 IQNAMGSGIDVSFDCVGFD-------------------------KTMSTALNATR--PGGKVCLIGL  283 (361)
Q Consensus       244 ~~~~~~~~~d~vld~~g~~-------------------------~~~~~~~~~l~--~~G~~v~~g~  283 (361)
                      +.+.. +++|+++++.|..                         ...+.+++.|.  .+|++|.++.
T Consensus        85 ~~~~~-G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS  150 (604)
T 2et6_A           85 AVKNF-GTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSS  150 (604)
T ss_dssp             HHHHH-SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             HHHHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECC
Confidence            43322 4799999998742                         13344555563  4689998864

>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*

Probab=95.17  E-value=0.033  Score=48.45  Aligned_cols=97  Identities=16%  Similarity=0.149  Sum_probs=62.6

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCE-EeecCCCccchhHHHHHHHhhcC
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADE-TAKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~-~~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      .+++|++||-+|||. |..++.+|+. |+..|++++.+++..+.+++    .|... +..+..+..++.         ..
T Consensus       122 ~~~~g~~VlD~~aG~-G~~~i~~a~~-g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~---------~~  190 (278)
T 3k6r_A          122 VAKPDELVVDMFAGI-GHLSLPIAVY-GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFP---------GE  190 (278)
T ss_dssp             HCCTTCEEEETTCTT-TTTTHHHHHH-TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCC---------CC
T ss_pred             hcCCCCEEEEecCcC-cHHHHHHHHh-cCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhc---------cc
Confidence            378999999987654 5556666765 54489999999998887765    34432 222222211211         13


Q ss_pred             CCccEEEEcc--CChHHHHHHHHhhcCCCEEEEEc
Q 018075          250 SGIDVSFDCV--GFDKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       250 ~~~d~vld~~--g~~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ..+|.|+-..  .....+..++++|++||.+...+
T Consensus       191 ~~~D~Vi~~~p~~~~~~l~~a~~~lk~gG~ih~~~  225 (278)
T 3k6r_A          191 NIADRILMGYVVRTHEFIPKALSIAKDGAIIHYHN  225 (278)
T ss_dssp             SCEEEEEECCCSSGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             cCCCEEEECCCCcHHHHHHHHHHHcCCCCEEEEEe
Confidence            5689766432  22347888999999999887654

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=95.15  E-value=0.12  Score=46.47  Aligned_cols=80  Identities=16%  Similarity=0.241  Sum_probs=50.1

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEeCChhHHHHH-HHcCCCEEeecCCCccchhHHHHHHHhhcCCCcc
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIA-RNLGADETAKVSTDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~-g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      -.+.+|||.| +|.+|...++.+... |...|+++++++.+.+.+ +++....+..+..+-.+. +.+.++    -.++|
T Consensus        19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~-~~l~~~----~~~~D   93 (344)
T 2gn4_A           19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDL-ERLNYA----LEGVD   93 (344)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCH-HHHHHH----TTTCS
T ss_pred             hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCH-HHHHHH----HhcCC
Confidence            4578999998 699999999877777 875688888888766543 333321111111111222 223222    23799


Q ss_pred             EEEEccCC
Q 018075          254 VSFDCVGF  261 (361)
Q Consensus       254 ~vld~~g~  261 (361)
                      +||.+.+.
T Consensus        94 ~Vih~Aa~  101 (344)
T 2gn4_A           94 ICIHAAAL  101 (344)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999874

>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*

Probab=95.14  E-value=0.035  Score=46.58  Aligned_cols=100  Identities=12%  Similarity=0.011  Sum_probs=63.5

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCE-EeecCCCccchhHHHHHHHhhcC
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADE-TAKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~-~~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      -+++|++|+-+|||. |..++.+++......|++++.++...+.+++    .|... +....   .+..+.   +.  .+
T Consensus        12 ~v~~g~~VlDIGtGs-G~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~---~d~l~~---l~--~~   82 (225)
T 3kr9_A           12 FVSQGAILLDVGSDH-AYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRL---ANGLAA---FE--ET   82 (225)
T ss_dssp             TSCTTEEEEEETCST-THHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEE---CSGGGG---CC--GG
T ss_pred             hCCCCCEEEEeCCCc-HHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEE---Cchhhh---cc--cC
Confidence            367899999999876 7788888886545579999999987766654    56532 21111   122111   11  01


Q ss_pred             CCccEEEEc-cCCh---HHHHHHHHhhcCCCEEEEEcc
Q 018075          250 SGIDVSFDC-VGFD---KTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       250 ~~~d~vld~-~g~~---~~~~~~~~~l~~~G~~v~~g~  283 (361)
                      ..||+|+.+ .|+.   ..+....+.|.++|+++.-+.
T Consensus        83 ~~~D~IviaG~Gg~~i~~Il~~~~~~L~~~~~lVlq~~  120 (225)
T 3kr9_A           83 DQVSVITIAGMGGRLIARILEEGLGKLANVERLILQPN  120 (225)
T ss_dssp             GCCCEEEEEEECHHHHHHHHHHTGGGCTTCCEEEEEES
T ss_pred             cCCCEEEEcCCChHHHHHHHHHHHHHhCCCCEEEEECC
Confidence            259977653 3432   235555667899999998665

>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}

Probab=95.14  E-value=0.046  Score=47.43  Aligned_cols=99  Identities=10%  Similarity=-0.010  Sum_probs=66.3

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhhcC
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      ..++++++||=+|||. |..++.+++..+...|++++.+++..+.+++    .+...+..+..   +..+. .     ..
T Consensus       115 ~~~~~~~~VLDlgcG~-G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~---d~~~~-~-----~~  184 (272)
T 3a27_A          115 FISNENEVVVDMFAGI-GYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILA---DNRDV-E-----LK  184 (272)
T ss_dssp             TSCCTTCEEEETTCTT-TTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEES---CGGGC-C-----CT
T ss_pred             HhcCCCCEEEEecCcC-CHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEEC---ChHHc-C-----cc
Confidence            4578899999888765 6677788887665589999999988777665    34333222112   22111 1     03


Q ss_pred             CCccEEEEccC--ChHHHHHHHHhhcCCCEEEEEc
Q 018075          250 SGIDVSFDCVG--FDKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       250 ~~~d~vld~~g--~~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ..+|+|+-...  ....+..+.+.|+|+|.++...
T Consensus       185 ~~~D~Vi~d~p~~~~~~l~~~~~~LkpgG~l~~s~  219 (272)
T 3a27_A          185 DVADRVIMGYVHKTHKFLDKTFEFLKDRGVIHYHE  219 (272)
T ss_dssp             TCEEEEEECCCSSGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             CCceEEEECCcccHHHHHHHHHHHcCCCCEEEEEE
Confidence            46999876443  2347888899999999988653

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=95.13  E-value=0.28  Score=44.25  Aligned_cols=90  Identities=14%  Similarity=0.130  Sum_probs=58.1

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEc
Q 018075          179 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  258 (361)
Q Consensus       179 g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  258 (361)
                      ..+|.|+|.|.+|...+..+...|. .|++.++++++.+.+.+.|+...       .+..+.+..     ....|+||-+
T Consensus        22 ~mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~~~g~~~~-------~s~~e~~~~-----a~~~DvVi~~   88 (358)
T 4e21_A           22 SMQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLNVNAVQALEREGIAGA-------RSIEEFCAK-----LVKPRVVWLM   88 (358)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTCBCC-------SSHHHHHHH-----SCSSCEEEEC
T ss_pred             CCEEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCEEe-------CCHHHHHhc-----CCCCCEEEEe
Confidence            4689999999999999998888998 68889999998887777664311       122222221     1235777777


Q ss_pred             cCChHHHHH----HHHhhcCCCEEEEEc
Q 018075          259 VGFDKTMST----ALNATRPGGKVCLIG  282 (361)
Q Consensus       259 ~g~~~~~~~----~~~~l~~~G~~v~~g  282 (361)
                      +... ....    +...+.++..++.++
T Consensus        89 vp~~-~v~~vl~~l~~~l~~g~iiId~s  115 (358)
T 4e21_A           89 VPAA-VVDSMLQRMTPLLAANDIVIDGG  115 (358)
T ss_dssp             SCGG-GHHHHHHHHGGGCCTTCEEEECS
T ss_pred             CCHH-HHHHHHHHHHhhCCCCCEEEeCC
Confidence            7655 3333    333345555555444

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=95.13  E-value=0.12  Score=45.10  Aligned_cols=81  Identities=12%  Similarity=0.073  Sum_probs=51.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEe-CChhHHHHH-H----HcCCCE-E--eecCCCcc------------
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITD-VDVQRLSIA-R----NLGADE-T--AKVSTDIE------------  235 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~-~~~~~~~~~-~----~lg~~~-~--~~~~~~~~------------  235 (361)
                      .+.++||.| +|++|.+.++.+...|+ .|+.++ ++.++.+.+ +    +.+... .  .++. +..            
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~~~~   85 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANALSATLNARRPNSAITVQADLS-NVATAPVSGADGSAP   85 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCS-SSCBCCCC----CCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecC-Ccccccccccccccc
Confidence            467889998 69999999998888999 677787 777654432 2    224221 1  2222 223            


Q ss_pred             -----chhHHHHHHHhhcCCCccEEEEccCC
Q 018075          236 -----DVDTDVGKIQNAMGSGIDVSFDCVGF  261 (361)
Q Consensus       236 -----~~~~~~~~~~~~~~~~~d~vld~~g~  261 (361)
                           +..+.+.++.... +++|+++++.|.
T Consensus        86 ~~~~~~v~~~~~~~~~~~-g~iD~lvnnAg~  115 (291)
T 1e7w_A           86 VTLFTRCAELVAACYTHW-GRCDVLVNNASS  115 (291)
T ss_dssp             BCHHHHHHHHHHHHHHHH-SCCCEEEECCCC
T ss_pred             cchHHHHHHHHHHHHHhc-CCCCEEEECCCC
Confidence                 4444444443322 479999999873

>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}

Probab=95.12  E-value=0.69  Score=36.52  Aligned_cols=98  Identities=10%  Similarity=0.069  Sum_probs=61.8

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc----CCCEEeecCCCccchhHHHHHHHh
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQN  246 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~  246 (361)
                      +......++++||-+|||. |..+..+++ .+. .+++++.+++..+.+++.    +...+....   .+..+   .+. 
T Consensus        28 ~~~~~~~~~~~vLdiG~G~-G~~~~~l~~-~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~---~d~~~---~~~-   97 (183)
T 2yxd_A           28 IGKLNLNKDDVVVDVGCGS-GGMTVEIAK-RCK-FVYAIDYLDGAIEVTKQNLAKFNIKNCQIIK---GRAED---VLD-   97 (183)
T ss_dssp             HHHHCCCTTCEEEEESCCC-SHHHHHHHT-TSS-EEEEEECSHHHHHHHHHHHHHTTCCSEEEEE---SCHHH---HGG-
T ss_pred             HHHcCCCCCCEEEEeCCCC-CHHHHHHHh-cCC-eEEEEeCCHHHHHHHHHHHHHcCCCcEEEEE---CCccc---ccc-
Confidence            3445678999999999876 777777777 444 899999999877766553    432221111   23322   121 


Q ss_pred             hcCCCccEEEEccC-C-hHHHHHHHHhhcCCCEEEEEc
Q 018075          247 AMGSGIDVSFDCVG-F-DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       247 ~~~~~~d~vld~~g-~-~~~~~~~~~~l~~~G~~v~~g  282 (361)
                        ...+|+|+.... . ...++.+.+.  ++|+++...
T Consensus        98 --~~~~D~i~~~~~~~~~~~l~~~~~~--~gG~l~~~~  131 (183)
T 2yxd_A           98 --KLEFNKAFIGGTKNIEKIIEILDKK--KINHIVANT  131 (183)
T ss_dssp             --GCCCSEEEECSCSCHHHHHHHHHHT--TCCEEEEEE
T ss_pred             --CCCCcEEEECCcccHHHHHHHHhhC--CCCEEEEEe
Confidence              257999997644 1 1234444444  999998764

>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}

Probab=95.10  E-value=0.013  Score=49.59  Aligned_cols=106  Identities=18%  Similarity=0.209  Sum_probs=61.4

Q ss_pred             HHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHH-HHHHh
Q 018075          169 HACRRANVG-PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDV-GKIQN  246 (361)
Q Consensus       169 ~~l~~~~~~-~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~-~~~~~  246 (361)
                      .++....+. ++.+||=+|||. |..+..+++. |+..|+++|.+++-.+.+++...........   ++.... ..+..
T Consensus        27 ~~L~~~~~~~~g~~VLDiGcGt-G~~t~~la~~-g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~---~~~~~~~~~~~~  101 (232)
T 3opn_A           27 KALKEFHLEINGKTCLDIGSST-GGFTDVMLQN-GAKLVYALDVGTNQLAWKIRSDERVVVMEQF---NFRNAVLADFEQ  101 (232)
T ss_dssp             HHHHHTTCCCTTCEEEEETCTT-SHHHHHHHHT-TCSEEEEECSSCCCCCHHHHTCTTEEEECSC---CGGGCCGGGCCS
T ss_pred             HHHHHcCCCCCCCEEEEEccCC-CHHHHHHHhc-CCCEEEEEcCCHHHHHHHHHhCccccccccc---eEEEeCHhHcCc
Confidence            345544444 567898899876 7777778776 7668999999988766655533322111000   100000 00100


Q ss_pred             --hcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEE
Q 018075          247 --AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       247 --~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~  281 (361)
                        .....+|+++.+.  ...+..+.+.|+|||+++.+
T Consensus       102 ~~~d~~~~D~v~~~l--~~~l~~i~rvLkpgG~lv~~  136 (232)
T 3opn_A          102 GRPSFTSIDVSFISL--DLILPPLYEILEKNGEVAAL  136 (232)
T ss_dssp             CCCSEEEECCSSSCG--GGTHHHHHHHSCTTCEEEEE
T ss_pred             CCCCEEEEEEEhhhH--HHHHHHHHHhccCCCEEEEE
Confidence              0001234444333  35899999999999999985

>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}

Probab=95.09  E-value=0.016  Score=50.63  Aligned_cols=93  Identities=14%  Similarity=0.197  Sum_probs=62.5

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc----CCCEEeecCCCccchhHHHHHHHhhcCCCc
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      .++.+||-+|||. |..+..+++. |+ .|++++.++...+.+++.    +.. +.....   +....    .  ....+
T Consensus       119 ~~~~~vLD~GcG~-G~~~~~l~~~-g~-~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~---d~~~~----~--~~~~f  185 (286)
T 3m70_A          119 ISPCKVLDLGCGQ-GRNSLYLSLL-GY-DVTSWDHNENSIAFLNETKEKENLN-ISTALY---DINAA----N--IQENY  185 (286)
T ss_dssp             SCSCEEEEESCTT-CHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTCC-EEEEEC---CGGGC----C--CCSCE
T ss_pred             cCCCcEEEECCCC-CHHHHHHHHC-CC-eEEEEECCHHHHHHHHHHHHHcCCc-eEEEEe---ccccc----c--ccCCc
Confidence            4789999999876 7777777776 77 799999999877766553    331 111111   21110    0  14679


Q ss_pred             cEEEEccC-----Ch---HHHHHHHHhhcCCCEEEEEc
Q 018075          253 DVSFDCVG-----FD---KTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       253 d~vld~~g-----~~---~~~~~~~~~l~~~G~~v~~g  282 (361)
                      |+|+....     .+   ..++.+.+.|+|||.++.+.
T Consensus       186 D~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  223 (286)
T 3m70_A          186 DFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVA  223 (286)
T ss_dssp             EEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             cEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence            99998542     11   47788889999999977654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	361
d1pl8a1	185	b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor	5e-37
d1pl8a2	171	c.2.1.1 (A:146-316) Ketose reductase (sorbitol deh	7e-35
d1e3ja2	170	c.2.1.1 (A:143-312) Ketose reductase (sorbitol deh	6e-31
d1e3ja1	178	b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor	8e-29
d1p0fa1	198	b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro	3e-25
d1kola1	201	b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog	3e-25
d1piwa1	192	b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy	2e-24
d1cdoa1	199	b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase	6e-23
d1vj0a1	184	b.35.1.2 (A:2-155,A:338-367) Hypothetical protein	3e-22
d1llua1	175	b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase	6e-22
d1jvba1	177	b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase	1e-21
d1rjwa1	171	b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase	3e-21
d1uufa1	179	b.35.1.2 (A:3-144,A:313-349) Hypothetical protein	1e-20
d2fzwa1	197	b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase	1e-20
d1h2ba1	171	b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenas	3e-20
d1e3ia1	202	b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase	3e-20
d1jqba1	177	b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secon	3e-18
d1f8fa1	194	b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr	6e-17
d2jhfa1	198	b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase	7e-17
d1jqba2	174	c.2.1.1 (A:1140-1313) Bacterial secondary alcohol	7e-15
d1kola2	195	c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps	9e-15
d1h2ba2	172	c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo	4e-11
d1vj0a2	182	c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T	1e-10
d1e3ia2	174	c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (	2e-10
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	3e-10
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	5e-09
d1tt7a1	162	b.35.1.2 (A:2-127,A:295-330) Hypothetical protein	1e-08
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	1e-08
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	2e-08
d1llua2	166	c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudom	2e-07
d1xa0a1	152	b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homo	2e-07
d1d1ta2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	3e-07
d1uufa2	168	c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc	6e-06
d1o89a1	146	b.35.1.2 (A:1-115,A:293-323) Hypothetical protein	1e-05
d2b25a1	324	c.66.1.13 (A:6-329) Hypothetical protein FLJ20628	2e-04
d1qora1	147	b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductas	6e-04
d1gu7a2	189	c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yea	7e-04
d1yb5a2	174	c.2.1.1 (A:121-294) Quinone oxidoreductase {Human	0.002
d1jvba2	170	c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeo	0.002

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  130 bits (326), Expect = 5e-37
 Identities = 75/180 (41%), Positives = 104/180 (57%), Gaps = 2/180 (1%)

Query: 12  KNQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKP 71
           K  N++  + G   L+++ Y +P  GP +V +R+ ++GICGSDVH+++  R  NFIVKKP
Sbjct: 5   KPNNLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKP 64

Query: 72  MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT 131
           MV+GHE +G +E+VGS VK L+ GDRVA+EPG    +   CK G YNL P + F  +PP 
Sbjct: 65  MVLGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPD 124

Query: 132 NGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIG 191
           +G+L     H A  CYKLPDNV         PL   + A      G    +M+    P  
Sbjct: 125 DGNLCRFYKHNAAFCYKLPDNVKPLV-THRFPLEKALEAFETFKKGLGLKIML-KCDPSD 182

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  123 bits (310), Expect = 7e-35
 Identities = 73/173 (42%), Positives = 109/173 (63%), Gaps = 2/173 (1%)

Query: 153 VSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 212
           V+ EEGA+ EPLSVG+HACRR  V     V++ G+GPIG+VTLL A+A GA ++++TD+ 
Sbjct: 1   VTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLS 60

Query: 213 VQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNAT 272
             RLS A+ +GAD   ++S +         K++  +G   +V+ +C G + ++   + AT
Sbjct: 61  ATRLSKAKEIGADLVLQISKESPQEIAR--KVEGQLGCKPEVTIECTGAEASIQAGIYAT 118

Query: 273 RPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGKID 325
           R GG + L+GL     TV L  AA REVD+ G+FRY +TWP+ I  L S  ++
Sbjct: 119 RSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWPVAISMLASKSVN 171

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score =  113 bits (283), Expect = 6e-31
 Identities = 76/171 (44%), Positives = 115/171 (67%), Gaps = 1/171 (0%)

Query: 153 VSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD 212
           VSLEEGA+ EPLSVGVHACRRA V   T V+++G+GPIGLV++LAA+A+GA  +      
Sbjct: 1   VSLEEGALLEPLSVGVHACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSP 60

Query: 213 VQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNAT 272
            +RL +A+N GAD T  V    E+  + + +I++A+G   +V+ DC G +K ++  +N T
Sbjct: 61  -RRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINIT 119

Query: 273 RPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTWPLCIEFLRSGK 323
           R GG + L+G+    +TV L  A ARE+D+  +FRY + +P+ +E + SG+
Sbjct: 120 RTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYCNDYPIALEMVASGR 170

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score =  108 bits (269), Expect = 8e-29
 Identities = 72/174 (41%), Positives = 106/174 (60%), Gaps = 1/174 (0%)

Query: 15  NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVI 74
           N++A L     L+++   +P     +V +++  +GICGSDVH+++  R A+FIVK PMVI
Sbjct: 2   NLSAVLYKQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVI 61

Query: 75  GHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGS 134
           GHE +G + +VG  VK L+ GDRVA+EPG+ C  C  CK G YNLCP++ F  +PP +G+
Sbjct: 62  GHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGN 121

Query: 135 LAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACRRANVGPETNVMIMGS 187
           LA   VH A  C+KLPDN ++++       L   V A   A    +  + +M S
Sbjct: 122 LARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMIS 175

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 99.2 bits (246), Expect = 3e-25
 Identities = 34/181 (18%), Positives = 66/181 (36%), Gaps = 16/181 (8%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
           K L ++   +      +V+++I A GIC        ++       K P+++GHE  G++E
Sbjct: 19  KPLSLETITVAPPKAHEVRIKILASGIC----GSDSSVLKEIIPSKFPVILGHEAVGVVE 74

Query: 84  EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPA 143
            +G+ V  ++ GD+V       CG C  CK+ + N C +            +  +     
Sbjct: 75  SIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRG 134

Query: 144 KLCYKLPDNVSLEEGAMCEPLSVGV------------HACRRANVGPETNVMIMGSGPIG 191
           K  Y L    +  E  +   ++V                     +     ++  G G   
Sbjct: 135 KPIYNLMGTSTFTEYTVVADIAVAKIDPKINVNFLVSTKLTLDQINKAFELLSSGQGVRS 194

Query: 192 L 192
           +
Sbjct: 195 I 195

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 99.2 bits (246), Expect = 3e-25
 Identities = 48/208 (23%), Positives = 82/208 (39%), Gaps = 27/208 (12%)

Query: 15  NMAAWLLGIKTLKIQPYHLPTL-------GPQDVKVRIKALGICGSDVHHFKTMRCANFI 67
           N     LG   +++Q    P +           V +++ +  ICGSD H  +    A   
Sbjct: 2   NRGVVYLGSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTA--- 58

Query: 68  VKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMR--- 124
            +  +V+GHE  G + E G +V++L++GD V++   ++CG C  CK     +C  +    
Sbjct: 59  -QVGLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPAR 117

Query: 125 ------FFGSPPTNGSLAHKVVHPAK--LCYKLPDNVS-LEEGAMCEPLSVGVHACRRAN 175
                 +       G  A  V+ P       KLPD    +E+  + E + V V +   A 
Sbjct: 118 AGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKINIAEVVGVQVISLDDAP 177

Query: 176 VGPETNVMIMGSGPIGLVTLLAARAFGA 203
            G         +G      +   + F A
Sbjct: 178 RGYG----EFDAGVPKKFVIDPHKTFSA 201

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 96.4 bits (239), Expect = 2e-24
 Identities = 42/184 (22%), Positives = 73/184 (39%), Gaps = 16/184 (8%)

Query: 14  QNMAAWLL----GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVK 69
           +      +      K  K   Y        D+ ++I+A G+CGSD+H           +K
Sbjct: 5   EKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIH---CAAGHWGNMK 61

Query: 70  KPMVIGHECAGIIEEVGSEVKS-LEVGDRVAL-EPGISCGHCSLCKAGSYNLCPEMRFFG 127
            P+V+GHE  G + ++G +  S L+VG RV +     SC  C  CK  +   C +     
Sbjct: 62  MPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTY 121

Query: 128 SPP------TNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEP-LSVGVHACRRANVGPET 180
           S P      + G  A+ V         +P+N+ +E   + E  +        + +V    
Sbjct: 122 SQPYEDGYVSQGGYANYVRVHEHFVVPIPENIWVETLPVGEAGVHEAFERMEKGDVRYRF 181

Query: 181 NVMI 184
            ++ 
Sbjct: 182 TLVG 185

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 92.7 bits (229), Expect = 6e-23
 Identities = 37/184 (20%), Positives = 65/184 (35%), Gaps = 25/184 (13%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
           K L I+   +      +++++I A G+C +D++H    +  +          HE AGI+E
Sbjct: 19  KPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLG---HEGAGIVE 75

Query: 84  EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP-------------- 129
            VG  V   + G++V       CG C  C++   N C +     SP              
Sbjct: 76  SVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKG 135

Query: 130 ------PTNGSLAHKVVHPAKLCYKLPDNVSLEEGA-MCEPLSVGVHAC-RRANVGPETN 181
                     + +   V       K+  +V L+E      PL     A     +      
Sbjct: 136 RKVLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLESVNDAIDLMKHGKCIRT 195

Query: 182 VMIM 185
           V+ +
Sbjct: 196 VLSL 199

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 184

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 90.7 bits (224), Expect = 3e-22
 Identities = 43/175 (24%), Positives = 69/175 (39%), Gaps = 22/175 (12%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
           + L  + + +  +    + V I + G+CGSDVH     R  +  V  P+++GHE AG + 
Sbjct: 15  QPLVYKEFEISDIPRGSILVEILSAGVCGSDVH---MFRGEDPRVPLPIILGHEGAGRVV 71

Query: 84  EVGSEVKSLEVGD-----RVALEPGISCGHCSLCKAG-SYNLCPEMRFFG-------SPP 130
           EV  E + L          +    GI+CG C  CK      LCP  + +G        P 
Sbjct: 72  EVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPH 131

Query: 131 TNGSLA-HKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMI 184
             G  + H V+ P     K+ + ++        PL     A           V++
Sbjct: 132 LRGCYSSHIVLDPETDVLKVSEKITHR-----LPLKEANKALELMESREALKVIL 181

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 89.2 bits (220), Expect = 6e-22
 Identities = 44/164 (26%), Positives = 67/164 (40%), Gaps = 6/164 (3%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
             L+I+   +P  GP  V V+I+A G+C +D+H  +           P + GHE  G + 
Sbjct: 16  APLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPP--LPFIPGHEGVGYVA 73

Query: 84  EVGSEVKSLEVGDRVALE-PGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHP 142
            VGS V  ++ GDRV +     +CG C  C  G   LC   +       NG  A  V+  
Sbjct: 74  AVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNT-GYSVNGGYAEYVLAD 132

Query: 143 AKLCYKLPDNVSLEEGA-MCEPLSVGVHACRRANVGPETNVMIM 185
                 LP NV         + ++  +   R   +     V+ M
Sbjct: 133 PNYVGILPKNVKATIHPGKLDDINQILDQMRAGQIEGRI-VLEM 175

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 88.9 bits (219), Expect = 1e-21
 Identities = 50/164 (30%), Positives = 72/164 (43%), Gaps = 8/164 (4%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFK-----TMRCANFIVKKPMVIGHEC 78
           K L +Q   +P      V ++++A G+C SDVH  +          +  VK P+ +GHE 
Sbjct: 11  KPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEI 70

Query: 79  AGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHK 138
           AG IEEVG EV     GD VA+ P    G+C  C+ G  +LC   R+ G    +G+ A  
Sbjct: 71  AGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEY 129

Query: 139 VVHPA-KLCYKLPDNVSLEEGAM-CEPLSVGVHACRRANVGPET 180
           V+ P  K  YKL     +    M  E  +  +            
Sbjct: 130 VIVPHYKYMYKLRRVKPMITKTMKLEEANEAIDNLENFKAIGRQ 173

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 87.3 bits (215), Expect = 3e-21
 Identities = 50/164 (30%), Positives = 73/164 (44%), Gaps = 6/164 (3%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
           + LKI+    PT+   +V VRIKA G+C +D+H              P++ GHE  GI+E
Sbjct: 11  EPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPK--LPLIPGHEGVGIVE 68

Query: 84  EVGSEVKSLEVGDRVALEPGISC-GHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHP 142
           EVG  V  L+VGDRV +    S  GHC  C +G   LC   +       +G  A      
Sbjct: 69  EVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNA-GYSVDGGYAEYCRAA 127

Query: 143 AKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMG 186
           A    K+PDN  +E     E ++       +  +     V+ + 
Sbjct: 128 ADYVVKIPDNTIIEV-QPLEKINEVFDRMLKGQINGRV-VLTLE 169

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 86.2 bits (212), Expect = 1e-20
 Identities = 40/162 (24%), Positives = 63/162 (38%), Gaps = 13/162 (8%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
           + L+         GP DVK+ I   G+C SD+H  ++          P V GHE  G + 
Sbjct: 11  QPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGT---VYPCVPGHEIVGRVV 67

Query: 84  EVGSEVKSLEVGDRVALEPGI-SCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAH----- 137
            VG +V+    GD V +   + SC HC  C+ G  N C  M    + PT     H     
Sbjct: 68  AVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGY 127

Query: 138 --KVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVG 177
             ++V   +   ++       E    + ++       R +V 
Sbjct: 128 SQQIVVHERYVLRIRVA--DIEMIRADQINEAYERMLRGDVK 167

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 86.1 bits (212), Expect = 1e-20
 Identities = 36/171 (21%), Positives = 63/171 (36%), Gaps = 26/171 (15%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
           K L I+   +      +V+++I A  +C +D +   T+  A+     P+++GH  AGI+E
Sbjct: 17  KPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAY---TLSGADPEGCFPVILGHLGAGIVE 73

Query: 84  EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT------------ 131
            VG  V  L+ GD V       CG C  C     NLC ++R                   
Sbjct: 74  SVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKG 133

Query: 132 --------NGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRA 174
                     + +   V       K+   + ++E       ++      +A
Sbjct: 134 KTILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFV---THNLSFDEINKA 181

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 84.7 bits (208), Expect = 3e-20
 Identities = 50/159 (31%), Positives = 72/159 (45%), Gaps = 3/159 (1%)

Query: 24  KTLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGII 82
           K L+I+    P L G  DV VRI   G+C +D+H  + M       K P  +GHE  G I
Sbjct: 10  KPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYI 69

Query: 83  EEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHP 142
           EEV   V+ LE GD V L P ++ G C  C+AG    C  + F G    +G  A  +   
Sbjct: 70  EEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGL-NIDGGFAEFMRTS 128

Query: 143 AKLCYKLPDNVSLEEGA-MCEPLSVGVHACRRANVGPET 180
            +   KLP +V +E      + ++  +    +  V    
Sbjct: 129 HRSVIKLPKDVRVEVDIHKLDEINDVLERLEKGEVLGRA 167

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 85.3 bits (210), Expect = 3e-20
 Identities = 39/175 (22%), Positives = 67/175 (38%), Gaps = 31/175 (17%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
             L I+   +      +V++++ A  +C +D++     + A F    P+V+GHECAGI+E
Sbjct: 19  SPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKALF----PVVLGHECAGIVE 74

Query: 84  EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT------------ 131
            VG  V + + GD+V       C  C LC +   NLC ++R F  P              
Sbjct: 75  SVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRF 134

Query: 132 ------------NGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRA 174
                         S +   V       ++ D   L+        ++   +   A
Sbjct: 135 TCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEFDLDLLV---THALPFESINDA 186

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 79.2 bits (194), Expect = 3e-18
 Identities = 44/186 (23%), Positives = 64/186 (34%), Gaps = 16/186 (8%)

Query: 17  AAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGH 76
              +LGI  L       P  G  D  VR  A+  C SD+H    +       +K M++GH
Sbjct: 3   GFAMLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHT---VFEGALGDRKNMILGH 59

Query: 77  ECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCP----EMRFFGSPPTN 132
           E  G + EVGSEVK  + GDRV +            +AG            +F       
Sbjct: 60  EAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGV 119

Query: 133 GSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGL 192
                 V         LP +V L +      +  G      A       +++M   P  L
Sbjct: 120 FGEYFHVNDADMNLAILPKDVDLSKLVTH--VYHGFDHIEEA-------LLLMKDKPKDL 170

Query: 193 VTLLAA 198
           +  +  
Sbjct: 171 IKAVVI 176

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 76.1 bits (186), Expect = 6e-17
 Identities = 37/195 (18%), Positives = 68/195 (34%), Gaps = 11/195 (5%)

Query: 16  MAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVI 74
           +AA         ++Q   +      +V V++ A G+C +D+               P V+
Sbjct: 5   IAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVPL----PAVL 60

Query: 75  GHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGS 134
           GHE +GIIE +G  V  L+VGD V L  G     C+ C  G+   C E         +G+
Sbjct: 61  GHEGSGIIEAIGPNVTELQVGDHVVLSYGYCG-KCTQCNTGNPAYCSEFFGR---NFSGA 116

Query: 135 LAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRR--ANVGPETNVMIMGSGPIGL 192
            +            + ++    + +         +   +   +   +  V       I  
Sbjct: 117 DSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDFPFDQLVKFYAFDEINQ 176

Query: 193 VTLLAARAFGAPRII 207
             + + +      II
Sbjct: 177 AAIDSRKGITLKPII 191

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 76.0 bits (186), Expect = 7e-17
 Identities = 38/174 (21%), Positives = 61/174 (35%), Gaps = 30/174 (17%)

Query: 24  KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIE 83
           K   I+   +      +V++++ A GIC SD H          +   P++ GHE AGI+E
Sbjct: 19  KPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHV----VSGTLVTPLPVIAGHEAAGIVE 74

Query: 84  EVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP-------------- 129
            +G  V ++  GD+V       CG C +CK    N C +                     
Sbjct: 75  SIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRG 134

Query: 130 ------PTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVG 177
                     + +   V       K+    +L      +PL   V    + N G
Sbjct: 135 KPIHHFLGTSTFSQYTVVDEISVAKIDAAFAL------DPLITHVLPFEKINEG 182

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 69.6 bits (169), Expect = 7e-15
 Identities = 31/145 (21%), Positives = 64/145 (44%), Gaps = 5/145 (3%)

Query: 153 VSLEEGAM-CEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDV 211
           + LE   M  + ++ G H    A++   ++V+++G G +GL+ +  A+  GA RII    
Sbjct: 1   MPLENAVMITDMMTTGFHGAELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGS 60

Query: 212 DVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNA 271
               +  A+  GA +      + ++   +   ++   G G+D      G  +T+S A+  
Sbjct: 61  RPICVEAAKFYGATDI----LNYKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKM 116

Query: 272 TRPGGKVCLIGLAKTEMTVALTPAA 296
            +PGG +  I    +   + +    
Sbjct: 117 VKPGGIISNINYHGSGDALLIPRVE 141

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 69.9 bits (170), Expect = 9e-15
 Identities = 39/153 (25%), Positives = 67/153 (43%), Gaps = 19/153 (12%)

Query: 159 AMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSI 218
            + + L  G H    A VGP + V + G+GP+GL    +AR  GA  +I+ D++  RL+ 
Sbjct: 6   CLSDILPTGYHGAVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAH 65

Query: 219 ARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD---------------K 263
           A+  G +      +    +   +  +       +D + D VGF+                
Sbjct: 66  AKAQGFEIA--DLSLDTPLHEQIAALLG--EPEVDCAVDAVGFEARGHGHEGAKHEAPAT 121

Query: 264 TMSTALNATRPGGKVCLIGLAKTEMTVALTPAA 296
            +++ +  TR  GK+ + GL  TE   A+  AA
Sbjct: 122 VLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAA 154

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 59.2 bits (142), Expect = 4e-11
 Identities = 37/178 (20%), Positives = 65/178 (36%), Gaps = 13/178 (7%)

Query: 153 VSLEEGAMCEPLSVGV----HACRRA--NVGPETNVMIMGSGPIGLVTLLAARAFGAPRI 206
           +S E+     PL+        A ++A   + P   V I+G G +G + +   +      +
Sbjct: 1   ISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATV 60

Query: 207 IITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMS 266
           I  DV  ++L +A  LGAD       D          ++   G G++V+ D VG   T+ 
Sbjct: 61  IALDVKEEKLKLAERLGADHVVDARRDPVKQV-----MELTRGRGVNVAMDFVGSQATVD 115

Query: 267 TALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGK 323
                    G++ ++G    E+        + EV   G            +     GK
Sbjct: 116 YTPYLLGRMGRLIIVG-YGGELRFPTIRVISSEVSFEGSLVGNYVELHELVTLALQGK 172

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 58.0 bits (139), Expect = 1e-10
 Identities = 37/183 (20%), Positives = 63/183 (34%), Gaps = 5/183 (2%)

Query: 151 DNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITD 210
           D++ +   AMC   +                V+I G+GP+GL  ++ AR+ GA  +I+  
Sbjct: 1   DDLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIA 60

Query: 211 VDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALN 270
               RL +A  +GAD T        +            G G D   +  G  + +     
Sbjct: 61  GSPNRLKLAEEIGADLTLNRRETSVEERRKAIM-DITHGRGADFILEATGDSRALLEGSE 119

Query: 271 ATRPGGKVCLIGLAKTEMTVALTPAAA---REVDVIGIFRY-RSTWPLCIEFLRSGKIDV 326
             R GG   + G+A  +  V          +     GI+    S +   +         +
Sbjct: 120 LLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTSHFVKTVSITSRNYQLL 179

Query: 327 KPL 329
             L
Sbjct: 180 SKL 182

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 56.9 bits (136), Expect = 2e-10
 Identities = 39/162 (24%), Positives = 65/162 (40%), Gaps = 8/162 (4%)

Query: 167 GVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD 225
           G  A    A V P +   + G G +GL  ++  +  GA RII  D++ ++   A+ LGA 
Sbjct: 16  GYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGAT 75

Query: 226 ETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK 285
           +        + V      I      G+D S DC G  +T+  A++ T  G   C +  AK
Sbjct: 76  DCLNPRELDKPVQDV---ITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAK 132

Query: 286 TEMTVALTPAAAREVDVIGIF----RYRSTWPLCIEFLRSGK 323
            +     T        + G F    +   + P  +   ++ K
Sbjct: 133 VDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKK 174

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 56.5 bits (135), Expect = 3e-10
 Identities = 35/159 (22%), Positives = 66/159 (41%), Gaps = 11/159 (6%)

Query: 172 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS 231
           + A V   +   + G G +GL  ++  +A GA RII  D++  + + A+ +GA E     
Sbjct: 22  KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV--- 78

Query: 232 TDIEDVDTDVGKIQNAMGS-GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTV 290
            + +D    + ++   M + G+D SF+ +G   TM TAL+  +    V +I     +   
Sbjct: 79  -NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQN 137

Query: 291 ALTPAA--AREVDVIGI----FRYRSTWPLCIEFLRSGK 323
                          G     F+ + + P  +    + K
Sbjct: 138 LSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKK 176

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 53.1 bits (126), Expect = 5e-09
 Identities = 41/180 (22%), Positives = 70/180 (38%), Gaps = 17/180 (9%)

Query: 155 LEEGAMCEPLSVGVH-----ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIIT 209
           L++      L  G+      A   A + P +   + G G +GL  ++  +  GA RII  
Sbjct: 3   LDKVC---LLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGV 59

Query: 210 DVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTAL 269
           D++  + + A+  GA E        + +      +      G+D SF+C+G  K M  AL
Sbjct: 60  DINKDKFARAKEFGATECINPQDFSKPIQE---VLIEMTDGGVDYSFECIGNVKVMRAAL 116

Query: 270 NATRPG-GKVCLIGLAKTEMTVALTPAA-AREVDVIGIF----RYRSTWPLCIEFLRSGK 323
            A   G G   ++G+A +   +A  P          G      +   + P  +    S K
Sbjct: 117 EACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKK 176

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 162

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 51.8 bits (123), Expect = 1e-08
 Identities = 22/169 (13%), Positives = 42/169 (24%), Gaps = 27/169 (15%)

Query: 25  TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEE 84
           ++ ++      L    V +++   GI   D    K            + I          
Sbjct: 17  SVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAG------ 70

Query: 85  VGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAK 144
                              +   +      G   +        S      L+     P  
Sbjct: 71  ------------------TVVSSNDPRFAEGDEVIATSYELGVSRDG--GLSEYASVPGD 110

Query: 145 LCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLV 193
               LP N+SL+E  + + L++           P     I+ +   G V
Sbjct: 111 WLVPLPQNLSLKEAMVDQLLTIVDREVSL-EETPGALKDILQNRIQGRV 158

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 51.9 bits (123), Expect = 1e-08
 Identities = 41/177 (23%), Positives = 67/177 (37%), Gaps = 12/177 (6%)

Query: 155 LEEGAM--CEPLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDV 211
           L+   +  C  +S G  A    A V P +   + G G +GL  ++   + GA RII  D+
Sbjct: 3   LDTVCLLGC-GVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDL 61

Query: 212 DVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNA 271
           +  +   A+  GA +   V+ +           +   G G+D S +CVG    M  AL +
Sbjct: 62  NPDKFEKAKVFGATDF--VNPNDHSEPISQVLSKMTNG-GVDFSLECVGNVGVMRNALES 118

Query: 272 TRPGGKVCLIGLAKTEMTVALTPAA-AREVDVIGI----FRYRSTWPLCIEFLRSGK 323
              G  V ++        VA  P          G     F+ +   P  ++     K
Sbjct: 119 CLKGWGVSVLVGWTDLHDVATRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKK 175

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 51.4 bits (122), Expect = 2e-08
 Identities = 37/163 (22%), Positives = 57/163 (34%), Gaps = 9/163 (5%)

Query: 167 GVHA-CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD 225
           G  A    A V P +   + G G +G   ++  +A GA RII       +   A  LGA 
Sbjct: 15  GYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGAT 74

Query: 226 ETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRP-GGKVCLIGLA 284
           E        + +      I      G+D + +C G  +TM  AL +T    G   ++GLA
Sbjct: 75  ECLNPKDYDKPIYE---VICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLA 131

Query: 285 KTEMTVALTPAA-AREVDVIGIF---RYRSTWPLCIEFLRSGK 323
                + L P        + G              ++     K
Sbjct: 132 SPNERLPLDPLLLLTGRSLKGSVFGGFKGEEVSRLVDDYMKKK 174

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 166

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 48.1 bits (113), Expect = 2e-07
 Identities = 38/173 (21%), Positives = 62/173 (35%), Gaps = 11/173 (6%)

Query: 153 VSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITD 210
           V   E A  +C  ++V     ++ N  P   V I G G +G V +  ARA G   +   D
Sbjct: 1   VEFAEIAPILCAGVTV-YKGLKQTNARPGQWVAISGIGGLGHVAVQYARAMG-LHVAAID 58

Query: 211 VDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALN 270
           +D  +L +AR LGA  T     +                 G          +     A+ 
Sbjct: 59  IDDAKLELARKLGASLTVNARQEDPVEA------IQRDIGGAHGVLVTAVSNSAFGQAIG 112

Query: 271 ATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSG 322
             R GG + L+GL   +    +     + + + G     R+     ++F   G
Sbjct: 113 MARRGGTIALVGLPPGDFPTPIFDVVLKGLHIAGSIVGTRADLQEALDFAGEG 165

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 152

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 47.9 bits (113), Expect = 2e-07
 Identities = 22/177 (12%), Positives = 41/177 (23%), Gaps = 32/177 (18%)

Query: 15  NMAAWLL----GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKK 70
              A+++       T  +Q   +  L   DV VR+    +   D          +  + K
Sbjct: 3   AFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGL----ASIPDGKIVK 58

Query: 71  PMVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPP 130
                         V S+      GD V                          +     
Sbjct: 59  TYPFVPGIDLAGVVVSSQHPRFREGDEVIA----------------------TGYEIGVT 96

Query: 131 TNGSLAHKVVHPAKLCYKLPDNVSLEEGAM-CEPLSVGVHACRRANVGPETNVMIMG 186
             G  +       +    LP  +      +    L   +    R  +   T V+ + 
Sbjct: 97  HFGGYSEYARLHGEWLVPLPKGLERIAQEISLAELPQALKRILRGELRGRT-VVRLA 152

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 47.5 bits (112), Expect = 3e-07
 Identities = 31/162 (19%), Positives = 61/162 (37%), Gaps = 10/162 (6%)

Query: 164 LSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL 222
            S G  A  +   V P +  ++ G G +GL  ++  ++ GA RII  D++  +   A  +
Sbjct: 14  FSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAV 73

Query: 223 GADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVC-LI 281
           GA E        + +      +    G+ +  +F+ +G  +TM  AL +         ++
Sbjct: 74  GATECISPKDSTKPI---SEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVV 130

Query: 282 GLAKTEMTVALTP-AAAREVDVIGIF----RYRSTWPLCIEF 318
           G+  +   +   P          G      + R   P  +  
Sbjct: 131 GVPPSAKMLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTE 172

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 43.8 bits (102), Expect = 6e-06
 Identities = 28/175 (16%), Positives = 51/175 (29%), Gaps = 16/175 (9%)

Query: 156 EEGAMCEPLSVGV----HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDV 211
           E+ A   PL           R    GP   V ++G G +G + +          ++    
Sbjct: 4   EQLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVVGIGGLGHMGI-KLAHAMGAHVVAFTT 62

Query: 212 DVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNA 271
              +   A+ LGADE          V++       A     D   + V     +      
Sbjct: 63  SEAKREAAKALGADEV---------VNSRNADEMAAHLKSFDFILNTVAAPHNLDDFTTL 113

Query: 272 TRPGGKVCLIGL-AKTEMTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGKI 324
            +  G + L+G  A    +  +     +   + G            ++F     I
Sbjct: 114 LKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEMLDFCAEHGI 168

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 146

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

 Score = 42.6 bits (99), Expect = 1e-05
 Identities = 25/163 (15%), Positives = 39/163 (23%), Gaps = 30/163 (18%)

Query: 16  MAAWLL----GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKP 71
           + A LL    G     +Q      L   DV V +    +   D            I   P
Sbjct: 1   LQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAI--TGKGKIIRNFP 58

Query: 72  MVIGHECAGIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPT 131
           M+ G + AG +                               AG   L            
Sbjct: 59  MIPGIDFAGTVRTS----------------------EDPRFHAGQEVLLTGWGVG--ENH 94

Query: 132 NGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACRRA 174
            G LA +          +P   + +E ++ E  +         
Sbjct: 95  WGGLAEQARVKGDWLVAMPQGQAAKEISLSEAPNFAEAIINNQ 137

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]} Length = 324

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (94), Expect = 2e-04
 Identities = 25/120 (20%), Positives = 46/120 (38%), Gaps = 12/120 (10%)

Query: 171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAP-RIIITDVDVQRLSIARN-----LGA 224
               ++ P   V+  GSG  G ++L  ++A G+  R+I  +V      +A+        +
Sbjct: 91  LSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDS 149

Query: 225 DETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD-----KTMSTALNATRPGGKVC 279
            + + V    ++VD     I  A      ++FD V  D      T+       + GG   
Sbjct: 150 WKLSHVEEWPDNVDFIHKDISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCA 209

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 147

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 37.7 bits (86), Expect = 6e-04
 Identities = 20/166 (12%), Positives = 44/166 (26%), Gaps = 33/166 (19%)

Query: 22  GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGI 81
           G + L+   +        +++V  KA+GI          +R   +               
Sbjct: 11  GPEVLQAVEFTPADPAENEIQVENKAIGIN----FIDTYIRSGLYPPPSLPSGLGTE--- 63

Query: 82  IEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVH 141
                                  + G  S   +G  ++    R   +    G+ +     
Sbjct: 64  -----------------------AAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNI 100

Query: 142 PAKLCYKLPDNVSLEEG-AMCEPLSVGV--HACRRANVGPETNVMI 184
            A     LP  + ++       PL      H    +     ++++I
Sbjct: 101 IADKAAILPAAIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLLI 146

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 189

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

 Score = 38.1 bits (87), Expect = 7e-04
 Identities = 24/190 (12%), Positives = 57/190 (30%), Gaps = 20/190 (10%)

Query: 153 VSLEEGA--MCEPLSVGVHACRRANVGPETNVMIMG--SGPIGLVTLLAARAFGAPRIII 208
           +++ +GA     PL+  +       + P  +  I    +  +G       +      I +
Sbjct: 1   LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISV 60

Query: 209 TDVDVQRLSIARNLGADETAKV----STDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKT 264
                    +  +L      +V      +  +    + +     G    ++ +CVG  K+
Sbjct: 61  IRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVG-GKS 119

Query: 265 MSTALNATRPGGKVCLI-GLAKTEMTVALTPAAAREVDVIGIF----------RYRSTWP 313
            +         G +    G++   +T+  +    +     G +             ST  
Sbjct: 120 STGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLN 179

Query: 314 LCIEFLRSGK 323
             I +   GK
Sbjct: 180 QIIAWYEEGK 189

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.5 bits (83), Expect = 0.002
 Identities = 32/174 (18%), Positives = 62/174 (35%), Gaps = 11/174 (6%)

Query: 154 SLEEGA-MCEPLSVGVHA-CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDV 211
             ++GA +  P      A    A V    +V++ G+     +           +I+ T  
Sbjct: 2   DFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAG 61

Query: 212 DVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNA 271
             +   I    GA E              + KI+  +G         +  +  +S  L+ 
Sbjct: 62  TEEGQKIVLQNGAHEV-----FNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSL 116

Query: 272 TRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRST---WPLCIEFLRSG 322
              GG+V ++G   T + +      A+E  +IG+  + ST   +      L++G
Sbjct: 117 LSHGGRVIVVGSRGT-IEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAG 169

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 36.3 bits (82), Expect = 0.002
 Identities = 30/157 (19%), Positives = 56/157 (35%), Gaps = 6/157 (3%)

Query: 169 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADET 227
            A R+A++ P   ++++G+G       +      +   II     +     A+  GAD  
Sbjct: 18  RAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYV 77

Query: 228 AKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE 287
              S      D      +     G+D   D    +KT+S    A    GK  ++GL   +
Sbjct: 78  INASMQ----DPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGAD 133

Query: 288 MTVALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGK 323
           +          E+  +G     +S +   +    +GK
Sbjct: 134 LHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGK 170

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	361
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	100.0
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	100.0
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	100.0
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	100.0
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	100.0
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	100.0
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	100.0
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.98
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.97
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.97
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.97
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	99.97
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.97
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.97
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	99.96
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.96
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	99.96
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.96
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.96
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.95
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.95
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.93
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.93
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.93
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.93
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.92
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.92
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.92
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.92
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.92
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.92
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.91
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.91
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.91
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.91
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.91
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.91
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.9
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.9
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.9
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.89
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.89
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.89
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.89
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.89
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.89
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.88
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.88
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.88
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.87
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.81
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.81
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	99.65
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.64
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.36
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	98.28
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	98.2
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	98.18
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	98.14
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	97.97
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	97.9
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	97.9
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	97.85
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	97.8
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	97.7
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	97.69
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.66
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	97.63
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.63
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	97.55
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	97.53
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	97.53
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	97.48
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	97.37
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	97.34
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	97.33
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	97.33
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	97.33
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	97.32
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	97.32
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	97.28
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	97.25
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	97.22
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.2
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	97.2
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	97.19
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	97.19
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	97.14
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	97.14
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	97.1
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	97.1
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	97.08
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	97.07
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	97.04
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	97.01
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	97.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	96.99
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	96.97
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	96.95
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	96.93
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	96.9
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	96.88
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	96.87
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	96.87
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	96.86
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	96.86
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	96.83
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	96.83
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	96.83
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	96.81
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	96.8
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	96.79
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	96.78
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	96.77
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	96.77
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	96.75
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	96.74
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	96.74
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	96.74
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	96.74
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	96.73
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.72
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	96.7
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	96.69
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	96.69
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	96.65
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	96.63
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	96.6
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.57
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	96.56
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	96.5
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	96.5
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.49
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	96.41
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	96.39
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	96.36
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	96.32
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	96.28
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	96.28
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	96.27
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	96.24
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	96.22
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	96.18
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	96.15
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	96.13
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	96.11
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	96.07
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	96.01
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	96.0
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	95.99
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	95.97
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	95.94
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	95.93
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	95.91
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	95.89
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	95.88
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	95.84
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	95.82
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.79
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	95.76
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	95.68
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	95.62
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	95.55
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	95.5
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	95.5
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.49
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	95.48
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	95.47
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	95.4
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	95.38
d2fcaa1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil	95.32
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	95.29
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	95.26
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	95.21
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	95.2
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	95.17
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	95.17
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	95.11
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	95.07
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	95.05
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	95.05
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	95.05
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	94.99
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	94.95
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	94.9
d1iy9a_	274	Spermidine synthase {Bacillus subtilis [TaxId: 142	94.82
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	94.76
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	94.75
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	94.72
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	94.71
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	94.71
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	94.7
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	94.69
d1uira_	312	Spermidine synthase {Thermus thermophilus [TaxId:	94.6
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	94.56
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	94.3
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	94.28
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.25
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	94.18
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	94.15
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	94.13
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.11
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	94.09
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	94.06
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	94.03
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	94.01
d1vlma_	208	Possible histamine N-methyltransferase TM1293 {The	93.99
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	93.98
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	93.91
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	93.87
d1sqga2	284	Ribosomal RNA small subunit methyltransferase B, R	93.76
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	93.76
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.63
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	93.53
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	93.5
d1ixka_	313	Hypothetical methyltransferase PH1374 {Archaeon Py	93.22
d1yzha1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Strep	93.22
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	93.18
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	93.14
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	92.99
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	92.98
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	92.94
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	92.83
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	92.81
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	92.76
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	92.68
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	92.64
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	92.59
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	92.53
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	92.49
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	92.48
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	92.46
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	92.46
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	92.23
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.22
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	92.16
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	92.07
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	92.06
d1jqea_	280	Histamine methyltransferase {Human (Homo sapiens)	92.03
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	92.02
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	91.95
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	91.94
d2g72a1	263	Phenylethanolamine N-methyltransferase, PNMTase {H	91.9
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	91.9
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	91.9
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	91.86
d1y7la1	310	O-acetylserine sulfhydrylase (Cysteine synthase) {	91.72
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	91.55
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	91.45
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	91.44
d1fcja_	302	O-acetylserine sulfhydrylase (Cysteine synthase) {	91.41
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	91.37
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	91.35
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	91.31
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	91.29
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	91.19
d1qzza2	256	Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu	91.14
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	91.12
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	91.1
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	90.95
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	90.94
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	90.7
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	90.63
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	90.62
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	90.62
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	90.42
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	90.24
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	90.22
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	90.17
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	89.98
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	89.79
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	89.51
d1jsxa_	207	Glucose-inhibited division protein B (GidB) {Esche	89.35
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	89.3
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	89.27
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	89.16
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	89.14
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	89.03
d2a14a1	257	Indolethylamine N-methyltransferase, INMT {Human (	88.99
d1z7wa1	320	O-acetylserine sulfhydrylase (Cysteine synthase) {	88.97
d1np3a2	182	Class I ketol-acid reductoisomerase (KARI) {Pseudo	88.86
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	88.85
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	88.83
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	88.82
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	88.73
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	88.73
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	88.67
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	88.65
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	88.65
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	88.64
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	88.64
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	88.61
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	88.42
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	88.09
d2dula1	375	N(2),N(2)-dimethylguanosine tRNA methyltransferase	88.06
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	87.96
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	87.87
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	87.85
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	87.84
d1u8fo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	87.71
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	87.61
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	87.56
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	87.48
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	87.4
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	87.34
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	87.12
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	87.11
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	87.03
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	87.01
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	86.85
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	86.84
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	86.8
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	86.72
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	86.58
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	86.51
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	86.24
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	86.24
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	86.23
d2b9ea1	293	NOL1R {Human (Homo sapiens) [TaxId: 9606]}	86.16
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	85.92
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	85.91
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	85.7
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	85.51
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	85.37
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	85.35
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	85.23
d1wkva1	382	O-acetylserine sulfhydrylase (Cysteine synthase) {	85.22
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	85.21
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	85.01
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	84.92
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	84.91
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	84.88
d2nvwa1	237	Galactose/lactose metabolism regulatory protein GA	84.87
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	84.83
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	84.68
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	84.68
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	84.56
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	84.52
d1xdza_	239	Glucose-inhibited division protein B (GidB) {Bacil	84.51
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	84.43
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	84.34
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	84.26
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	84.14
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	84.06
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	83.9
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	83.85
d2nu7a1	119	Succinyl-CoA synthetase, alpha-chain, N-terminal (	83.69
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	83.65
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	83.64
d1oi7a1	121	Succinyl-CoA synthetase, alpha-chain, N-terminal (	83.35
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	83.22
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	83.08
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	82.97
d1tdja1	331	Threonine deaminase {Escherichia coli [TaxId: 562]	82.97
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	82.83
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	82.8
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	82.77
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	82.75
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	82.72
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	82.61
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	82.54
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	82.53
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	82.44
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	82.2
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	82.18
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	82.13
d1ej0a_	180	RNA methyltransferase FtsJ {Escherichia coli [TaxI	81.83
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	81.7
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	81.68
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	81.62
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	81.59
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	81.38
d2b4ro1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	81.12
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	80.96
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	80.84
d3lada1	229	Dihydrolipoamide dehydrogenase {Azotobacter vinela	80.81
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	80.8
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	80.68
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	80.48

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=100.00  E-value=4.7e-38  Score=259.20  Aligned_cols=173  Identities=41%  Similarity=0.767  Sum_probs=161.5

Q ss_pred             cceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCC
Q 018075           14 QNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE   93 (361)
Q Consensus        14 ~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   93 (361)
                      .+|+|++++++.|+++|+|.|+|+++||||||+++|||++|++.+++........+.|+++|||++|+|+++|+++++|+
T Consensus         1 ~~maAVl~g~~~l~~~e~~~P~~~~~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~Vv~vG~~v~~~~   80 (178)
T d1e3ja1           1 DNLSAVLYKQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLK   80 (178)
T ss_dssp             CCEEEEEEETTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCSCC
T ss_pred             CceEEEEEcCCcEEEEEeECCCCCCCEEEEEEEEEcccCchhhhhccCccccccccCCeeeccccceEEEecCcccCCCC
Confidence            37899999999999999999999999999999999999999999887655555567899999999999999999999999


Q ss_pred             CCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHHH
Q 018075           94 VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACR  172 (361)
Q Consensus        94 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l~  172 (361)
                      +||||++.+...|+.|..|..|+..+|++..+.+....+|+|+||+++++++++++|+++++++|+++ .++.+||++++
T Consensus        81 ~GdrV~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~a~~  160 (178)
T d1e3ja1          81 KGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVDAFE  160 (178)
T ss_dssp             TTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCCCGGGEEEEEEGGGHHHHHH
T ss_pred             CCCEEEECcccccCCccccccCCccccccccceeccccccccceeeeecccceeeCCCCCCHHHHHHHHhHHHHHHHHHH
Confidence            99999999999999999999999999999999888788999999999999999999999999999876 58899999999


Q ss_pred             hcCCCCCCEEEEEC
Q 018075          173 RANVGPETNVMIMG  186 (361)
Q Consensus       173 ~~~~~~g~~vlI~G  186 (361)
                      ++++++|++|||+|
T Consensus       161 ~~~~~~g~~VlVig  174 (178)
T d1e3ja1         161 AARKKADNTIKVMI  174 (178)
T ss_dssp             HHHHCCTTCSEEEE
T ss_pred             HhCCCCCCEEEEEc
Confidence            89999999999997

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-36  Score=249.18  Aligned_cols=175  Identities=42%  Similarity=0.753  Sum_probs=159.1

Q ss_pred             ccceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCC
Q 018075           13 NQNMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSL   92 (361)
Q Consensus        13 ~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~   92 (361)
                      ..+.++++.+|+.|+++++|.|+|+++||||||.++|||++|++.+++...+....+.|+++|||++|+|+++|+++++|
T Consensus         6 p~~~a~V~~gp~~l~l~evp~P~p~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~   85 (185)
T d1pl8a1           6 PNNLSLVVHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHL   85 (185)
T ss_dssp             CCCEEEEEEETTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCSC
T ss_pred             CCCEEEEEeCCCeEEEEEeECCCCCCCEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeeeeeeEEEeccceeee
Confidence            46678899999999999999999999999999999999999999988755445556789999999999999999999999


Q ss_pred             CCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHHHHHHHH
Q 018075           93 EVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACR  172 (361)
Q Consensus        93 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~  172 (361)
                      ++||||++.+..+|+.|.+|+.|++..|++..+++....+|+|+||++++.++++++|+++++++|+++ ++++|+++++
T Consensus        86 ~~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~~g~~~~~G~~aey~~~~~~~~~~lP~~~~~~~aa~~-pl~~a~~a~~  164 (185)
T d1pl8a1          86 KPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKLPDNVKPLVTHRF-PLEKALEAFE  164 (185)
T ss_dssp             CTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEECCTTCGGGEEEEE-EGGGHHHHHH
T ss_pred             cccccceecceeccccchhhccchhchhccceeeecccccccceEEEEEchHHEEECCCCCCHHHHHHH-HHHHHHHHHH
Confidence            999999999999999999999999999999999988788999999999999999999999999887654 6677888888


Q ss_pred             hcCCCCCCEEEEECCCH
Q 018075          173 RANVGPETNVMIMGSGP  189 (361)
Q Consensus       173 ~~~~~~g~~vlI~G~g~  189 (361)
                      ..++++|++||| |+|+
T Consensus       165 ~~~~~~G~~VlI-g~GP  180 (185)
T d1pl8a1         165 TFKKGLGLKIML-KCDP  180 (185)
T ss_dssp             HHHTTCCSEEEE-ECCT
T ss_pred             HhCCCCCCEEEE-EeCC
Confidence            888899999998 6664

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=100.00  E-value=9.5e-34  Score=231.20  Aligned_cols=167  Identities=32%  Similarity=0.511  Sum_probs=149.7

Q ss_pred             eEEEEeeCC-ceEEEEecCCCC-CCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCC
Q 018075           16 MAAWLLGIK-TLKIQPYHLPTL-GPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE   93 (361)
Q Consensus        16 ~~~~~~~~~-~l~~~~~~~p~~-~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   93 (361)
                      |++++.+.+ +|++++++.|++ +++||||||.++|||++|++.+.|.......+..|+++|||++|+|+++|+++++++
T Consensus         1 kA~~~~~~g~pl~i~~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G~V~~vG~~v~~~~   80 (171)
T d1h2ba1           1 KAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLE   80 (171)
T ss_dssp             CEEEESSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCCSCC
T ss_pred             CEEEEEeCCCCCEEEEeeCCCCCCCCEEEEEEEecccceeeehccCCCcccccCCccccccceeeeeeeecccCCCCcCC
Confidence            567777764 599999999986 689999999999999999999887654434457899999999999999999999999


Q ss_pred             CCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccc-ccchhHHHHHHHH
Q 018075           94 VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGA-MCEPLSVGVHACR  172 (361)
Q Consensus        94 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa-~~~~~~~a~~~l~  172 (361)
                      +||||++.+...|+.|..|+.|++.+|++..+++. ...|+|+||+.++++.++++|++++++.|+ ++.++++||++++
T Consensus        81 ~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~e~aa~~~~~~~ta~~al~  159 (171)
T d1h2ba1          81 KGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGL-NIDGGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERLE  159 (171)
T ss_dssp             TTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTT-TBCCSSBSEEEECGGGEEECCTTCCCCEEEEEGGGHHHHHHHHH
T ss_pred             CCCEEEEcCccCCCCccccccccccccccccccee-ecccccceeeeehhhcceecCCCCCHHHHHHHHhHHHHHHHHHH
Confidence            99999999999999999999999999999888775 468999999999999999999999998776 5578999999998


Q ss_pred             hcCCCCCCEEEE
Q 018075          173 RANVGPETNVMI  184 (361)
Q Consensus       173 ~~~~~~g~~vlI  184 (361)
                      .+++ .|++|||
T Consensus       160 ~~~~-~G~~VlI  170 (171)
T d1h2ba1         160 KGEV-LGRAVLI  170 (171)
T ss_dssp             TTCC-SSEEEEE
T ss_pred             hcCC-CCCEEEe
Confidence            8888 8999998

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=100.00  E-value=9.9e-34  Score=235.27  Aligned_cols=169  Identities=25%  Similarity=0.390  Sum_probs=144.6

Q ss_pred             ccceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCC
Q 018075           13 NQNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS   91 (361)
Q Consensus        13 ~~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   91 (361)
                      +++++|++..+ ++|+++++|.|+|+++||||||.++|+|++|++.++|..    ..++|+++|||++|+|+++|++|++
T Consensus         2 k~~~Aav~~~~g~~l~l~~v~~P~p~~geVlVkv~a~gic~sD~~~~~G~~----~~~~P~i~GHE~~G~V~~vG~~v~~   77 (194)
T d1f8fa1           2 KDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKY----PVPLPAVLGHEGSGIIEAIGPNVTE   77 (194)
T ss_dssp             EEEEEEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSS----CCCSSBCCCCEEEEEEEEECTTCCS
T ss_pred             ceeEEEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEEecCchHhhhhhcc----cccCCcccccceEEEeeecCcccee
Confidence            56788888866 579999999999999999999999999999999988753    2478999999999999999999999


Q ss_pred             CCCCCEEEecCCcCCCCCccccCCCCCCCCCcccc---CC-------------------CCCCCceeEEEEecCCceEEC
Q 018075           92 LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFF---GS-------------------PPTNGSLAHKVVHPAKLCYKL  149 (361)
Q Consensus        92 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~~g~~~~~~~~~~~~~~~v  149 (361)
                      |++||||+..+. +|++|.+|+.|++++|++....   +.                   ....|+|+||+++++..++++
T Consensus        78 ~~vGDrVv~~~~-~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~~~~~~~i  156 (194)
T d1f8fa1          78 LQVGDHVVLSYG-YCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKV  156 (194)
T ss_dssp             CCTTCEEEECCC-CCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEE
T ss_pred             EccCceeeeecc-cccCChhhhCCCcccccccccceeccccccceeeeecCCceeeccccccccccceeEEEehHHEEEC
Confidence            999999976554 8999999999999999975222   11                   012378999999999999999


Q ss_pred             CCCCCcccccccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEE
Q 018075          150 PDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIIT  209 (361)
Q Consensus       150 P~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v  209 (361)
                      |++++++++                       +++.|+|++|++|+|+++.+|+.+++++
T Consensus       157 p~~i~~~~~-----------------------~~i~g~g~~g~~aiq~a~~~g~~~iiaV  193 (194)
T d1f8fa1         157 TKDFPFDQL-----------------------VKFYAFDEINQAAIDSRKGITLKPIIKI  193 (194)
T ss_dssp             CTTCCGGGG-----------------------EEEEEGGGHHHHHHHHHHTSCSEEEEEC
T ss_pred             CCCCCcccE-----------------------EEEeCcHHHHHHHHHHHHHcCCCEEEEe
Confidence            999887554                       3456789999999999999999777765

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=5.4e-33  Score=228.17  Aligned_cols=172  Identities=27%  Similarity=0.379  Sum_probs=150.3

Q ss_pred             CCcccceEEEEeeCC-ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCC
Q 018075           10 GDKNQNMAAWLLGIK-TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSE   88 (361)
Q Consensus        10 ~~~~~~~~~~~~~~~-~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   88 (361)
                      .||.+|+++++.+++ +++++++|.|.|+++||||||.++|+|++|++.++|...  ....+|+++|||++|+|+++|++
T Consensus         1 ~~P~tMkA~v~~~~g~pl~l~evp~P~~~~~evlVkv~a~gic~~D~~~~~G~~~--~~~~~P~i~GhE~~G~V~~~G~~   78 (175)
T d1llua1           1 TLPQTMKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWP--VKPPLPFIPGHEGVGYVAAVGSG   78 (175)
T ss_dssp             CCCSEEEEEEBCSTTSCCEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHHTCSS--SCCCSSBCCCSCEEEEEEEECTT
T ss_pred             CcchhcEEEEEEeCCCCCEEEEeECCCCCCCEEEEEEEEecCcccchhhhccCcc--ccccCCcCCCCcceEEEEEeCCC
Confidence            378889998888874 599999999999999999999999999999999987542  22468999999999999999999


Q ss_pred             CCCCCCCCEEEecCC-cCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccc-ccchhHH
Q 018075           89 VKSLEVGDRVALEPG-ISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGA-MCEPLSV  166 (361)
Q Consensus        89 v~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa-~~~~~~~  166 (361)
                      ++++++||||...+. ..|+.|.+|..|++..|+....++. ..+|+|+||+++++++++++|++++++.++ ++.++.+
T Consensus        79 v~~~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~~G~-~~~gg~aey~~v~~~~~~~iPd~l~~~~a~~~~~~~~t  157 (175)
T d1llua1          79 VTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGY-SVNGGYAEYVLADPNYVGILPKNVKATIHPGKLDDINQ  157 (175)
T ss_dssp             CCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEECTTTSEECCTTCCCCEEEECGGGHHH
T ss_pred             ccccccCCEEEeccccccCCccccccCCccccccccccccc-ccccccceEEEechHHEEECCCCCChhHHHHHHhHHHH
Confidence            999999999998765 4799999999999999999888875 468999999999999999999999988777 4457777


Q ss_pred             HHHHHHhcCCCCCCEEEEE
Q 018075          167 GVHACRRANVGPETNVMIM  185 (361)
Q Consensus       167 a~~~l~~~~~~~g~~vlI~  185 (361)
                      +++.++... .+|++|||+
T Consensus       158 ~~~~~~~g~-~~G~~VLVl  175 (175)
T d1llua1         158 ILDQMRAGQ-IEGRIVLEM  175 (175)
T ss_dssp             HHHHHHTTC-CSSEEEEEC
T ss_pred             HHHHHHhCC-CCCCEEEeC
Confidence            888776654 479999985

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=100.00  E-value=4.1e-33  Score=233.10  Aligned_cols=171  Identities=25%  Similarity=0.324  Sum_probs=150.5

Q ss_pred             cccceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCC
Q 018075           12 KNQNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVK   90 (361)
Q Consensus        12 ~~~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   90 (361)
                      ++++++|++.++ ++|+++|++.|+|+++||+|||.++|+|++|++.+.|...   ...+|+++|||++|+|+++|++++
T Consensus         6 ~~~~kAav~~~~~~pl~i~ev~~P~p~~~eVlIkv~a~giCgsD~~~~~g~~~---~~~~p~i~GhE~~G~v~~vG~~v~   82 (199)
T d1cdoa1           6 VIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKH---KDGFPVVLGHEGAGIVESVGPGVT   82 (199)
T ss_dssp             CEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCC---TTSCSEECCCCEEEEEEEECTTCC
T ss_pred             ceEEEEEEEecCCCCcEEEEEECCCCCCCEEEEEEEEEEEecchhhhhhhccc---ccccccccccccceEEEEEcCCCc
Confidence            467789999887 4799999999999999999999999999999998887543   247899999999999999999999


Q ss_pred             CCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCC--------------------CCCceeEEEEecCCceEECC
Q 018075           91 SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPP--------------------TNGSLAHKVVHPAKLCYKLP  150 (361)
Q Consensus        91 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~g~~~~~~~~~~~~~~~vP  150 (361)
                      +|++||||++.+..+|+.|.+|+.|++.+|++........                    ..|+|+||++++++.++++|
T Consensus        83 ~~~~GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~Ggfaey~~v~~~~~~~iP  162 (199)
T d1cdoa1          83 EFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKID  162 (199)
T ss_dssp             SCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEECC
T ss_pred             eecCCCEEEEeeeccccccccccCCCcccccccccccccccccCcccceeeccceeecccccCCceEEEEEchHHEEECC
Confidence            9999999999999999999999999999998754332211                    14999999999999999999


Q ss_pred             CCCCccccccc-chhHHHHHHHHh-cCCCCCCEEEEE
Q 018075          151 DNVSLEEGAMC-EPLSVGVHACRR-ANVGPETNVMIM  185 (361)
Q Consensus       151 ~~~~~~~aa~~-~~~~~a~~~l~~-~~~~~g~~vlI~  185 (361)
                      ++++++++|++ .++.+++.+++. ...+.|++|||+
T Consensus       163 ~~~~~~~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~  199 (199)
T d1cdoa1         163 PSVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL  199 (199)
T ss_dssp             TTSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            99999988755 588999999976 778999999984

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=5.7e-33  Score=227.92  Aligned_cols=167  Identities=26%  Similarity=0.470  Sum_probs=145.3

Q ss_pred             CcccceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCC
Q 018075           11 DKNQNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEV   89 (361)
Q Consensus        11 ~~~~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   89 (361)
                      |.+.++++++.++ ++|++++++.|+|+++||||||.++|||++|+++++|.+..   .++|+++|||++|+|+++|++|
T Consensus         1 m~~k~kA~v~~~~~~pl~i~ev~~P~~~~~evlVkv~a~gIC~sD~~~~~G~~~~---~~~P~vlGHE~~G~V~~vG~~v   77 (184)
T d1vj0a1           1 MGLKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPR---VPLPIILGHEGAGRVVEVNGEK   77 (184)
T ss_dssp             CCEEEEEEEBCSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTT---CCSSBCCCCEEEEEEEEESSCC
T ss_pred             CCceEEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEECCCCCchhheeccCCc---cccccccceeeeeeeeEEeccc
Confidence            6778888888877 46999999999999999999999999999999999875422   3689999999999999999998


Q ss_pred             C-----CCCCCCEEEecCCcCCCCCccccCCC-CCCCCCccccCCC-------CCCCceeEEEEec-CCceEECCCCCCc
Q 018075           90 K-----SLEVGDRVALEPGISCGHCSLCKAGS-YNLCPEMRFFGSP-------PTNGSLAHKVVHP-AKLCYKLPDNVSL  155 (361)
Q Consensus        90 ~-----~~~~Gd~V~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-------~~~g~~~~~~~~~-~~~~~~vP~~~~~  155 (361)
                      +     .+++||+|++.+..+|+.|.+|+.|+ +..|++...++..       ..+|+|+||++++ +++++++|+++++
T Consensus        78 ~~~~~~~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~~G~~~~~~~~~~~~Gg~ae~~~v~~~~~v~~ip~~l~~  157 (184)
T d1vj0a1          78 RDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKITH  157 (184)
T ss_dssp             BCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEECTTCCE
T ss_pred             cccccccccceeeeEeccccccccChhHhCccccccCCCceeeccCCCCCCCCCcceeCcCcEEechhHcEEECCCCCCH
Confidence            6     46899999999999999999999997 5679998877632       3589999999996 6799999999997


Q ss_pred             ccccccchhHHHHHHHHhcCCCCCCEEEEE
Q 018075          156 EEGAMCEPLSVGVHACRRANVGPETNVMIM  185 (361)
Q Consensus       156 ~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~  185 (361)
                      ++     ++++|+++++++++++|++|||+
T Consensus       158 ~~-----pl~~A~~a~~~~~~~~G~~VlI~  182 (184)
T d1vj0a1         158 RL-----PLKEANKALELMESREALKVILY  182 (184)
T ss_dssp             EE-----EGGGHHHHHHHHHHTSCSCEEEE
T ss_pred             HH-----HHHHHHHHHHHhCCCcCCEEEEe
Confidence            53     45678888988899999999997

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.98  E-value=2.5e-32  Score=229.20  Aligned_cols=171  Identities=24%  Similarity=0.353  Sum_probs=147.2

Q ss_pred             CCcccceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCC
Q 018075           10 GDKNQNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSE   88 (361)
Q Consensus        10 ~~~~~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~   88 (361)
                      .-+++++++++.++ ++|+++|+|.|+|+++||||||.++|||++|++.++|..    +...|+++|||++|+|+++|++
T Consensus         4 ~~~~~~KAaV~~~~g~pl~i~evp~P~p~~geVlVkv~a~gic~sD~~~~~G~~----~~~~P~v~GHE~~G~V~~vG~~   79 (202)
T d1e3ia1           4 GKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKK----KALFPVVLGHECAGIVESVGPG   79 (202)
T ss_dssp             TSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTTS----CCCSSBCCCCEEEEEEEEECTT
T ss_pred             CCeEEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEeccccceeeeec----ccccccccccccceEEeeecCC
Confidence            45678999999987 569999999999999999999999999999999888743    3467999999999999999999


Q ss_pred             CCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCC------------------------CCCCceeEEEEecCC
Q 018075           89 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP------------------------PTNGSLAHKVVHPAK  144 (361)
Q Consensus        89 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~g~~~~~~~~~~~  144 (361)
                      |+++++||||++.+...|+.|.+|..|+++.|++...++..                        ...|+|+||+++++.
T Consensus        80 V~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~faey~~v~~~  159 (202)
T d1e3ia1          80 VTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEA  159 (202)
T ss_dssp             CCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGG
T ss_pred             ceeccCCCEEEEEeeccccccccccCCcccccccccccccCccceecccccccccccCceeeecccccCCceEEEEEehh
Confidence            99999999999999999999999999999999986555321                        124899999999999


Q ss_pred             ceEECCCCCCccccccc-chhHHHHHHHHhcCCCCCCEEEEEC
Q 018075          145 LCYKLPDNVSLEEGAMC-EPLSVGVHACRRANVGPETNVMIMG  186 (361)
Q Consensus       145 ~~~~vP~~~~~~~aa~~-~~~~~a~~~l~~~~~~~g~~vlI~G  186 (361)
                      .++++|++++++.++++ .++.+++.+++.  +++|++|.|+.
T Consensus       160 ~l~~lP~~~~~~~~~~~~~~~~~~~~a~~~--~k~G~~V~vi~  200 (202)
T d1e3ia1         160 NLARVDDEFDLDLLVTHALPFESINDAIDL--MKEGKSIRTIL  200 (202)
T ss_dssp             GEEECCTTSCGGGGEEEEEEGGGHHHHHHH--HHTTCCSEEEE
T ss_pred             hEEECCCCCCHHHHHHHHHHHHHHHHHHHh--CCCCCEEEEEE
Confidence            99999999999877654 456666667654  47899998763

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=7.6e-32  Score=223.09  Aligned_cols=172  Identities=22%  Similarity=0.362  Sum_probs=148.4

Q ss_pred             CcccceEEEEeeCC---ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCC
Q 018075           11 DKNQNMAAWLLGIK---TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGS   87 (361)
Q Consensus        11 ~~~~~~~~~~~~~~---~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   87 (361)
                      .|.++++.++.+++   .+++++.+.++++++||||||.++|||++|++.+.|...   ..++|+++|||++|+|+++|+
T Consensus         3 ~P~~~ka~~~~~~~~~~~~~~~~~~p~p~~~~eVlVkv~a~giC~sDl~~~~g~~~---~~~~P~i~GHE~~G~Vv~vG~   79 (192)
T d1piwa1           3 YPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWG---NMKMPLVVGHEIVGKVVKLGP   79 (192)
T ss_dssp             TTTCEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTS---CCCSSEECCCCEEEEEEEECT
T ss_pred             CCceeEEEEEeCCCcCCcceEeeccCCCCCCCeEEEEEeeeCCCcchHHHHcCCCC---CCCCCcCcccccccchhhccc
Confidence            46777888887664   478888887778999999999999999999998887543   257899999999999999999


Q ss_pred             CC-CCCCCCCEEEecCC-cCCCCCccccCCCCCCCCCccccC------CCCCCCceeEEEEecCCceEECCCCCCccccc
Q 018075           88 EV-KSLEVGDRVALEPG-ISCGHCSLCKAGSYNLCPEMRFFG------SPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGA  159 (361)
Q Consensus        88 ~v-~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa  159 (361)
                      ++ +.+++||||...+. .+|+.|.+|..|++..|++.....      +...+|+|+||++++++.++++|+++++++|+
T Consensus        80 ~v~~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~G~~~~Ggfaey~~v~~~~~~~iP~~l~~e~Aa  159 (192)
T d1piwa1          80 KSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIWVETLP  159 (192)
T ss_dssp             TCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTCCEEEEE
T ss_pred             ccccccCCCCeeeEeeeccCCCCchhhhcCCcccccccccccccccccccccccceeeEEEeehHHeEECCCCCCHHHHH
Confidence            98 66999999988765 479999999999999999876653      23457999999999999999999999999888


Q ss_pred             ccch-hHHHHHHHHhcCCCCCCEEEEE
Q 018075          160 MCEP-LSVGVHACRRANVGPETNVMIM  185 (361)
Q Consensus       160 ~~~~-~~~a~~~l~~~~~~~g~~vlI~  185 (361)
                      ++.+ +.+|+++++++++++|++|||.
T Consensus       160 l~~~~~~ta~~~l~~~~vk~g~~Vvv~  186 (192)
T d1piwa1         160 VGEAGVHEAFERMEKGDVRYRFTLVGY  186 (192)
T ss_dssp             SSHHHHHHHHHHHHHTCCSSEEEEECC
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCEEEEE
Confidence            7765 6789999999999999999985

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.97  E-value=5e-32  Score=225.65  Aligned_cols=170  Identities=22%  Similarity=0.271  Sum_probs=146.2

Q ss_pred             ccceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCC
Q 018075           13 NQNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS   91 (361)
Q Consensus        13 ~~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   91 (361)
                      ++++++++.++ ++|+++++|+|+|+++||||||.++|||++|+++++|...   ...+|+++|||++|+|+++|++|++
T Consensus         5 ~~~kAav~~~~g~~l~i~evp~P~p~~~eVLVkv~a~gic~sD~~~~~G~~~---~~~~p~v~GhE~~G~V~~vG~~V~~   81 (197)
T d2fzwa1           5 IKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADP---EGCFPVILGHLGAGIVESVGEGVTK   81 (197)
T ss_dssp             EEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCT---TCCSSBCCCCEEEEEEEEECTTCCS
T ss_pred             eEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEecCCCCcHHHHcCCcc---cccccccCCcceeeEEEeecCCcee
Confidence            45899999987 5699999999999999999999999999999999988542   2478999999999999999999999


Q ss_pred             CCCCCEEEecCCcCCCCCccccCCCCCCCCCccccC--------------------CCCCCCceeEEEEecCCceEECCC
Q 018075           92 LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFG--------------------SPPTNGSLAHKVVHPAKLCYKLPD  151 (361)
Q Consensus        92 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~g~~~~~~~~~~~~~~~vP~  151 (361)
                      +++||||++.+..+|+.|.+|..|++.+|.......                    .....|+|+||+++++..++++|+
T Consensus        82 ~~~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~g~GgfAey~vvp~~~~~~vp~  161 (197)
T d2fzwa1          82 LKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDP  161 (197)
T ss_dssp             CCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCT
T ss_pred             cCCCCEEEEccccccccccccccCccccCccccccccccccCCccceeccCCcceecccccccceeEEEechHHEEECCC
Confidence            999999999999999999999999999998743321                    011248999999999999999999


Q ss_pred             CCCccccccc-chhHHHHHHHHh-cCCCCCCEEEEE
Q 018075          152 NVSLEEGAMC-EPLSVGVHACRR-ANVGPETNVMIM  185 (361)
Q Consensus       152 ~~~~~~aa~~-~~~~~a~~~l~~-~~~~~g~~vlI~  185 (361)
                      ++++++||.+ .++.+++.++++ ..-+.+++|||+
T Consensus       162 ~l~~~~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi  197 (197)
T d2fzwa1         162 LIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI  197 (197)
T ss_dssp             TSCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             CCCHHHHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence            9999998855 478888888855 334678899874

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.97  E-value=1.5e-34  Score=241.26  Aligned_cols=181  Identities=26%  Similarity=0.394  Sum_probs=149.1

Q ss_pred             ceEEEEeeCCceEEEEecCCCC-------CCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCC
Q 018075           15 NMAAWLLGIKTLKIQPYHLPTL-------GPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGS   87 (361)
Q Consensus        15 ~~~~~~~~~~~l~~~~~~~p~~-------~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~   87 (361)
                      ++++++.+++.++++|+|.|++       .++||+|||.++|||++|++.++|..    +..+|+++|||++|+|+++|+
T Consensus         2 ~kA~v~~~~~~le~~e~~~P~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~G~~----~~~~P~v~GHE~~G~Vv~vG~   77 (201)
T d1kola1           2 NRGVVYLGSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRT----TAQVGLVLGHEITGEVIEKGR   77 (201)
T ss_dssp             EEEEEEEETTEEEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCS----CCCTTCBCCCCEEEEEEEECT
T ss_pred             cEEEEEeCCCceEEEEecCCcccCCCCCCCCCEEEEEEEEEEEcchhhhhhcCCc----ccccceeccceeeeeeecccc
Confidence            5788888999999999999865       46999999999999999999988643    347899999999999999999


Q ss_pred             CCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccC---------CCCCCCceeEEEEecC--CceEECCCCCCcc
Q 018075           88 EVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFG---------SPPTNGSLAHKVVHPA--KLCYKLPDNVSLE  156 (361)
Q Consensus        88 ~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~g~~~~~~~~~~--~~~~~vP~~~~~~  156 (361)
                      +|++|++||||++.+..+|++|.+|+.|+++.|.+.....         ....+|+|+||++++.  ..+++||++.++.
T Consensus        78 ~V~~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~~~~~~~Gg~aeyv~vp~~~~~l~~iPd~~~~~  157 (201)
T d1kola1          78 DVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAM  157 (201)
T ss_dssp             TCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCHHHHH
T ss_pred             ccccccccceeEEeeeeeccCChhhhCCCcccccccccccccccccccCCCccccccccEEEeehHHCeEEECCCCCChH
Confidence            9999999999999888999999999999998887753221         1345799999999975  3699999985554


Q ss_pred             ccc-ccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Q 018075          157 EGA-MCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGA  203 (361)
Q Consensus       157 ~aa-~~~~~~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~  203 (361)
                      +++ +..+++++++++...+.+.++    +|+|++|++++|+||++||
T Consensus       158 ~~~~~~~~~~~~~~a~~~~~~~~g~----~g~G~vG~~~i~~ak~~GA  201 (201)
T d1kola1         158 EKINIAEVVGVQVISLDDAPRGYGE----FDAGVPKKFVIDPHKTFSA  201 (201)
T ss_dssp             HTCCHHHHHTEEEECGGGHHHHHHH----HHHTCSCEEEECTTCSSCC
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCCeE----EeeCHHHHHHHHHHHHcCC
Confidence            444 445666677666554444443    5999999999999999986

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.97  E-value=3.2e-31  Score=216.77  Aligned_cols=167  Identities=32%  Similarity=0.491  Sum_probs=144.0

Q ss_pred             ceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCC
Q 018075           15 NMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE   93 (361)
Q Consensus        15 ~~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   93 (361)
                      |+++++.++ ++|+++++|.|+|++|||||||+++|||++|++.+++...  .....|+++|||++|+|+++|+++++++
T Consensus         1 MkA~v~~~~g~pl~i~~v~~P~~~~~eVlVkv~a~gic~sD~~~~~~~~~--~~~~~p~v~GhE~~G~Vv~vG~~v~~~~   78 (171)
T d1rjwa1           1 MKAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWP--VKPKLPLIPGHEGVGIVEEVGPGVTHLK   78 (171)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSS--SCCCSSBCCCSCEEEEEEEECTTCCSCC
T ss_pred             CeEEEEecCCCCcEEEEeECCCCCCCeEEEEEEEeeccccceeeeecccc--cccccccccCCEEEEEEEEecccccCce
Confidence            567777765 5699999999999999999999999999999998875432  2357899999999999999999999999


Q ss_pred             CCCEEEecCC-cCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccchhHHHHHHHH
Q 018075           94 VGDRVALEPG-ISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLSVGVHACR  172 (361)
Q Consensus        94 ~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~~a~~~l~  172 (361)
                      +||||+..+. ..|+.|..|..+..++|+...+++. ..+|+|+||+++++++++++|++++++.|+ +.++.++++.+.
T Consensus        79 vGdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~e~A~-l~~~~~~~~~~~  156 (171)
T d1rjwa1          79 VGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGY-SVDGGYAEYCRAAADYVVKIPDNTIIEVQP-LEKINEVFDRML  156 (171)
T ss_dssp             TTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTT-TBCCSSBSEEEEEGGGCEECCTTCCEEEEE-GGGHHHHHHHHH
T ss_pred             eeeEEeeccccccccccccccCCCccccccccccce-eccCccccceEecHHHEEECCCCCCHHHHH-HHHHHHHHHHHH
Confidence            9999988654 4788999999999999999887775 467999999999999999999999987665 467788888887


Q ss_pred             hcCCCCCCEEEEEC
Q 018075          173 RANVGPETNVMIMG  186 (361)
Q Consensus       173 ~~~~~~g~~vlI~G  186 (361)
                      ++.+ +|++|||+|
T Consensus       157 ~~~~-~G~tVlViG  169 (171)
T d1rjwa1         157 KGQI-NGRVVLTLE  169 (171)
T ss_dssp             TTCC-SSEEEEECC
T ss_pred             hcCC-CCCEEEEeC
Confidence            7666 599999997

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.97  E-value=6e-31  Score=216.23  Aligned_cols=168  Identities=32%  Similarity=0.480  Sum_probs=142.5

Q ss_pred             ceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccc-----cccCCCCcccCcceeEEEEEeCCC
Q 018075           15 NMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCA-----NFIVKKPMVIGHECAGIIEEVGSE   88 (361)
Q Consensus        15 ~~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~-----~~~~~~p~~~G~e~~G~V~~vG~~   88 (361)
                      |||+++.++ ++|++++++.|+|++|||+|||+++|||++|++.++|....     ....++|+++|||++|+|+++|++
T Consensus         1 MKA~~~~~~G~pl~i~dv~~P~p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~~G~V~~~g~~   80 (177)
T d1jvba1           1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDE   80 (177)
T ss_dssp             CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTT
T ss_pred             CeEEEEEeCCCCCEEEEeeCCCCCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceEEEEEeeeccC
Confidence            577788877 46999999999999999999999999999999999875432     122478999999999999999999


Q ss_pred             CCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCC-ceEECCCCCCcccccc-cchhHH
Q 018075           89 VKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAK-LCYKLPDNVSLEEGAM-CEPLSV  166 (361)
Q Consensus        89 v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~vP~~~~~~~aa~-~~~~~~  166 (361)
                      +++|++||||++.+...|+.|.+|+.|+++.|++..+++. ...|+|+||++++.. .++++|+..+.+.|+. +.++++
T Consensus        81 v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~~g~-~~~G~~aey~~vp~~~~~~~~~~~~~~~~a~~~~~~~~~  159 (177)
T d1jvba1          81 VVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGI-NFDGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANE  159 (177)
T ss_dssp             CCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTT-TBCCSSBSEEEESCGGGEEECSSSCCCCEEEEEGGGHHH
T ss_pred             ccccccCceEeeeeccccccccccccccccccCCcceeee-ccccccccEEEEEhHHeEEECCCCChHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999888875 467999999999765 4666666555444443 358899


Q ss_pred             HHHHHHhcCCCCCCEEEE
Q 018075          167 GVHACRRANVGPETNVMI  184 (361)
Q Consensus       167 a~~~l~~~~~~~g~~vlI  184 (361)
                      ++++++..++ .|++|||
T Consensus       160 a~~~~~~~~~-~G~~VlI  176 (177)
T d1jvba1         160 AIDNLENFKA-IGRQVLI  176 (177)
T ss_dssp             HHHHHHTTCC-CSEEEEE
T ss_pred             HHHHHHhhcc-cCCceEC
Confidence            9999988776 6999997

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.97  E-value=7.5e-32  Score=224.76  Aligned_cols=169  Identities=22%  Similarity=0.367  Sum_probs=141.3

Q ss_pred             cccceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCC
Q 018075           12 KNQNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVK   90 (361)
Q Consensus        12 ~~~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   90 (361)
                      .-++|+|++.++ ++|+++|+|.|+|+++||||||.++|||++|+++++|..    +..+|+++|||++|+|+++|++++
T Consensus         6 ~~~~KAav~~~~g~~l~i~ev~~P~p~~~eVlVkv~a~gICgsDlh~~~G~~----~~~~P~i~GHE~~G~Vv~~G~~v~   81 (198)
T d1p0fa1           6 DITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEII----PSKFPVILGHEAVGVVESIGAGVT   81 (198)
T ss_dssp             CEEEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSS----CCCSSBCCCCCEEEEEEEECTTCC
T ss_pred             ceEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEecccceeeeecc----ccccccccceeeeeeeeecCcccc
Confidence            458899999988 579999999999999999999999999999999988753    347899999999999999999999


Q ss_pred             CCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCC--------------------CCCCceeEEEEecCCceEECC
Q 018075           91 SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSP--------------------PTNGSLAHKVVHPAKLCYKLP  150 (361)
Q Consensus        91 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~g~~~~~~~~~~~~~~~vP  150 (361)
                      ++++||||++.+..+|+.|.+|+.|++.+|++..+.+..                    ...++|+||+++++..++++|
T Consensus        82 ~~~~GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~faey~~v~~~~~~kip  161 (198)
T d1p0fa1          82 CVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKID  161 (198)
T ss_dssp             SCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEEC
T ss_pred             cCcCCCEEEEEeeccccccccccccccccchhhhccccccccCCCceeEeeCCeeccccCCCccceeeEEecHHHEEECC
Confidence            999999999999999999999999999999976654321                    125899999999999999999


Q ss_pred             CCCCcccccccchhHHHHHHHHhcCCCCCCEEEEECCCHHHH
Q 018075          151 DNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGL  192 (361)
Q Consensus       151 ~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~G~g~~G~  192 (361)
                      ++++.+.++...        +....++++++|||.|+|++|+
T Consensus       162 ~~~~~~~~~~~~--------~~~~~v~~~~~vlv~G~G~iGl  195 (198)
T d1p0fa1         162 PKINVNFLVSTK--------LTLDQINKAFELLSSGQGVRSI  195 (198)
T ss_dssp             TTSCGGGGEEEE--------ECGGGHHHHHHHTTTSSCSEEE
T ss_pred             CCCCHHHHHHhh--------cchhhcCCCCEEEEECCCcceE
Confidence            999876654221        1112234455688888888775

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=1.4e-29  Score=207.24  Aligned_cols=158  Identities=25%  Similarity=0.353  Sum_probs=131.9

Q ss_pred             ceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCC
Q 018075           15 NMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE   93 (361)
Q Consensus        15 ~~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   93 (361)
                      |+|+..+++ ++|+++|+|.|+|+++||||||+++|||++|++.+.|....   ..+|+++|||++|+|+++|++|++++
T Consensus         1 m~a~~~~~~~~pl~i~ev~~P~pg~geVlVkv~a~gic~sDl~~~~g~~~~---~~~P~i~GhE~~G~V~~vG~~V~~~~   77 (179)
T d1uufa1           1 IKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAG---TVYPCVPGHEIVGRVVAVGDQVEKYA   77 (179)
T ss_dssp             CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSC---CCSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred             CeEEEEccCCCCCEEEEecCCCCCCCEEEEEEEEECCCCCcceeeeeeecc---ccccccccccccccchhhccccccCC
Confidence            456666665 67999999999999999999999999999999999875432   47799999999999999999999999


Q ss_pred             CCCEEEecCC-cCCCCCccccCCCCCCCCCccccCC-------CCCCCceeEEEEecCCceEECCCCCCcccccccchhH
Q 018075           94 VGDRVALEPG-ISCGHCSLCKAGSYNLCPEMRFFGS-------PPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEPLS  165 (361)
Q Consensus        94 ~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~~~  165 (361)
                      +||||...+. .+|++|.+|+.|++++|+++.....       ....|+|+||+++++++++++|++..  .++...++.
T Consensus        78 vGdrV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~GgfaEy~~v~~~~~~~ip~~~~--~~~~a~~l~  155 (179)
T d1uufa1          78 PGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRVADI--EMIRADQIN  155 (179)
T ss_dssp             TTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCCCCE--EEECGGGHH
T ss_pred             CCCEEEEcccccccCccccccCcccccCCCccccccccCCCCCcccccccceEEEechHHEEECCCCCc--ChhHhchhH
Confidence            9999987764 5899999999999999998653321       22468999999999999999996543  334445788


Q ss_pred             HHHHHHHhcCCC
Q 018075          166 VGVHACRRANVG  177 (361)
Q Consensus       166 ~a~~~l~~~~~~  177 (361)
                      ++++++.++.++
T Consensus       156 ~a~~a~~~a~v~  167 (179)
T d1uufa1         156 EAYERMLRGDVK  167 (179)
T ss_dssp             HHHHHHHTTCSS
T ss_pred             HHHHHHHHhCcc
Confidence            899998776554

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.9e-28  Score=200.22  Aligned_cols=171  Identities=43%  Similarity=0.788  Sum_probs=155.7

Q ss_pred             CCcccccccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCC
Q 018075          153 VSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST  232 (361)
Q Consensus       153 ~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~  232 (361)
                      +|+++||++.|+++||++++++++++||+|+|+|+|++|++++|+|+.+|+++|++++.+++|+++++++|++.++++..
T Consensus         1 vS~e~Aal~epla~a~~a~~~~~~~~gd~VlI~G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~   80 (171)
T d1pl8a2           1 VTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISK   80 (171)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCcccccccc
Confidence            57899998899999999999999999999999999999999999999999988999999999999999999999887543


Q ss_pred             CccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecCCCcH
Q 018075          233 DIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTW  312 (361)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  312 (361)
                        .+..+..+.+....+.++|+||||+|++..++.++++++++|+++.+|......+++...++.+++++.|++.+.+++
T Consensus        81 --~~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~gG~iv~~G~~~~~~~~~~~~~~~k~l~i~Gs~~~~~~~  158 (171)
T d1pl8a2          81 --ESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTW  158 (171)
T ss_dssp             --CCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSCCCCCHHHHHHTTCEEEECCSCSSCH
T ss_pred             --cccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCCCEEEEEecCCCCCccCHHHHHHCCcEEEEEeCCHhHH
Confidence              456666666666668899999999999989999999999999999999888777888889999999999999888899


Q ss_pred             HHHHHHHHcCCCC
Q 018075          313 PLCIEFLRSGKID  325 (361)
Q Consensus       313 ~~~~~~l~~g~~~  325 (361)
                      +++++++++|+++
T Consensus       159 ~~al~li~~gkid  171 (171)
T d1pl8a2         159 PVAISMLASKSVN  171 (171)
T ss_dssp             HHHHHHHHTTSCC
T ss_pred             HHHHHHHHcCCCC
Confidence            9999999999983

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.96  E-value=1.2e-29  Score=207.10  Aligned_cols=143  Identities=28%  Similarity=0.249  Sum_probs=125.6

Q ss_pred             ceEEEEeeCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCC
Q 018075           15 NMAAWLLGIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEV   94 (361)
Q Consensus        15 ~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~   94 (361)
                      |+++++.+++.++++|+|.|.|+++|||||+.++|||++|++.+.+...   ..++|+++|||++|+|+++|++|++|++
T Consensus         1 MKa~v~~~~~~l~i~e~p~P~~~~~eVlIkv~a~gic~sD~~~~~~~~~---~~~~P~i~GhE~~G~V~~vG~~v~~~~v   77 (177)
T d1jqba1           1 MKGFAMLGINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGAL---GDRKNMILGHEAVGEVVEVGSEVKDFKP   77 (177)
T ss_dssp             CEEEEEEETTEEEEEECCCCCCCTTCEEEEEEEECCCHHHHHHHHHCTT---CCCSSEECCCCEEEEEEEECTTCCSCCT
T ss_pred             CeEEEEEeCCCeEEEEeeCCCCCCCEEEEEEEEEecCCCcccccccCCC---CCCCCccCcceeeEEeeecccccceecC
Confidence            5788888999999999999999999999999999999999987754332   2477999999999999999999999999


Q ss_pred             CCEEEecCCcCCCCCccccCCCCCCCCCccccC--CCCCCCceeEEEEecC--CceEECCCCCCcccccc
Q 018075           95 GDRVALEPGISCGHCSLCKAGSYNLCPEMRFFG--SPPTNGSLAHKVVHPA--KLCYKLPDNVSLEEGAM  160 (361)
Q Consensus        95 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~--~~~~~vP~~~~~~~aa~  160 (361)
                      ||||++.+..+|++|.+|+.|++..|.+.....  +...+|+|+||++++.  ..++++|+++++++++.
T Consensus        78 GdrV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~~~G~~aEy~~vp~a~~~l~~iP~~~~~~~~~~  147 (177)
T d1jqba1          78 GDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGEYFHVNDADMNLAILPKDVDLSKLVT  147 (177)
T ss_dssp             TCEEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTTBCCSSBSSEEESSHHHHCEECCTTSCGGGGEE
T ss_pred             CCcEEEeeeeccccccchhhhhhcccccccccccccCCCChhcCeeEEEEhhhCeEEECCCCcchHHHHH
Confidence            999999999999999999999999999865332  2346799999999986  46899999999887763

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.96  E-value=2.1e-28  Score=199.89  Aligned_cols=170  Identities=45%  Similarity=0.781  Sum_probs=155.4

Q ss_pred             CCcccccccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCC
Q 018075          153 VSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST  232 (361)
Q Consensus       153 ~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~  232 (361)
                      +|+++||+++|+++||+++++.++++||+|||+|+|++|++++|+||.+|+ +|++++.+++|+++++++|++..+.++.
T Consensus         1 VS~e~Aal~ePla~a~~a~~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~Ga-~vi~v~~~~~r~~~a~~~ga~~~~~~~~   79 (170)
T d1e3ja2           1 VSLEEGALLEPLSVGVHACRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVVDP   79 (170)
T ss_dssp             SCHHHHHTHHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEECCT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcccccchhhHhhHhhhcc-cccccchHHHHHHHHHHcCCcEEEeccc
Confidence            578999999999999999999999999999999999999999999999999 7999999999999999999998887766


Q ss_pred             CccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecCCCcH
Q 018075          233 DIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRYRSTW  312 (361)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  312 (361)
                      ...+..+..+++....+.++|+||||+|++..++.++++++++|+++.+|......+++...++.+++++.|++.+.+++
T Consensus        80 ~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~~~~~~~~~k~i~i~gs~~~~~~~  159 (170)
T d1e3ja2          80 AKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYCNDY  159 (170)
T ss_dssp             TTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSCCCCCHHHHHTTTCEEEECCSCSSCH
T ss_pred             cccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcCCceEEEecCCCCCCcCHHHHHHCCCEEEEEECCHHHH
Confidence            66677777777777678899999999999888999999999999999999887766788888999999999998888899


Q ss_pred             HHHHHHHHcCC
Q 018075          313 PLCIEFLRSGK  323 (361)
Q Consensus       313 ~~~~~~l~~g~  323 (361)
                      +++++++++|+
T Consensus       160 ~~ai~li~~Gk  170 (170)
T d1e3ja2         160 PIALEMVASGR  170 (170)
T ss_dssp             HHHHHHHHTTS
T ss_pred             HHHHHHHHcCC
Confidence            99999999986

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.96  E-value=2.2e-29  Score=210.32  Aligned_cols=169  Identities=22%  Similarity=0.324  Sum_probs=139.8

Q ss_pred             CcccceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCC
Q 018075           11 DKNQNMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEV   89 (361)
Q Consensus        11 ~~~~~~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   89 (361)
                      ...++|+|++.++ ++|++++++.|.|+++||||||.++|||++|++.++|..    +.+.|+++|||++|+|+++|+++
T Consensus         5 ~~~k~KAavl~~~~~~l~i~ev~~P~p~~~eVlVkV~a~giC~sDl~~~~G~~----~~~~P~i~GHE~~G~Vv~vG~~v   80 (198)
T d2jhfa1           5 KVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTL----VTPLPVIAGHEAAGIVESIGEGV   80 (198)
T ss_dssp             SCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSS----CCCSSBCCCCSEEEEEEEECTTC
T ss_pred             CceEEEEEEEecCCCCCEEEEEECCCCCCCEEEEEEEEEecccccceeecCCc----ccccceecccceeEEEEecCccc
Confidence            3467889898865 679999999999999999999999999999999998753    24689999999999999999999


Q ss_pred             CCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCC--------------------CCCCCceeEEEEecCCceEEC
Q 018075           90 KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGS--------------------PPTNGSLAHKVVHPAKLCYKL  149 (361)
Q Consensus        90 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~g~~~~~~~~~~~~~~~v  149 (361)
                      +++++||||++.+..+|+.|.+|+.|++.+|+.......                    ....|+|+||+++++.+++++
T Consensus        81 ~~~~vGdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~fAEy~~v~~~~~~~~  160 (198)
T d2jhfa1          81 TTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKI  160 (198)
T ss_dssp             CSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEEC
T ss_pred             cCcCCCCEEEEeeeecccccccccCCccceeccccccccCccccCccccccccCceeccCCCCCcccCeEEeCHHHeEEC
Confidence            999999999999999999999999999999998654321                    112489999999999999999


Q ss_pred             CCCCCcccccc-cchhHHHHHHHHhcCCCCCCEEEEE
Q 018075          150 PDNVSLEEGAM-CEPLSVGVHACRRANVGPETNVMIM  185 (361)
Q Consensus       150 P~~~~~~~aa~-~~~~~~a~~~l~~~~~~~g~~vlI~  185 (361)
                      |++++++.++. ..++.......  ..+++|++|+|+
T Consensus       161 p~~~~~e~l~~~~~~~~~v~~g~--~~l~~G~~VaVi  195 (198)
T d2jhfa1         161 DAAFALDPLITHVLPFEKINEGF--DLLRSGESIRTI  195 (198)
T ss_dssp             CTTSCCGGGEEEEEEGGGHHHHH--HHHHTTCCSEEE
T ss_pred             CCCCCHHHHHHHHHHHHhhhhCC--ceeeCCCEEEEE
Confidence            99998876553 23333322222  235789999886

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=4.1e-28  Score=193.03  Aligned_cols=142  Identities=20%  Similarity=0.294  Sum_probs=120.7

Q ss_pred             ceEEEEe---eCCceEEE-EecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCC
Q 018075           15 NMAAWLL---GIKTLKIQ-PYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVK   90 (361)
Q Consensus        15 ~~~~~~~---~~~~l~~~-~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   90 (361)
                      |++++++   +|+.++++ ++|.|+|++|||||||.++|+|++|++..+|...  .....|+++|||++|+|+++|++++
T Consensus         3 MkAv~~~~~G~p~~l~~~~~~~~P~~~~~eVlVkv~a~~i~~~D~~~~~g~~~--~~~~~p~i~G~e~~G~V~~vG~~v~   80 (150)
T d1yb5a1           3 MRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYS--RKPLLPYTPGSDVAGVIEAVGDNAS   80 (150)
T ss_dssp             EEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSS--CCCCSSBCCCSCEEEEEEEECTTCT
T ss_pred             eeEEEEEccCCcceEEEEeecCCCCCCCCeEEEEEEEecCcccchhhhcCCcC--ccccccccCccceeeeeEeecceee
Confidence            4555555   46779986 6899999999999999999999999999887542  2246799999999999999999999


Q ss_pred             CCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccc-hhHHHHH
Q 018075           91 SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVH  169 (361)
Q Consensus        91 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-~~~~a~~  169 (361)
                      +|++||||+..+                           ...|+|+||++++++.++++|+++++++||.++ ...++++
T Consensus        81 ~~~vGdrV~~~~---------------------------~~~G~~ae~~~v~~~~~~~iP~~ls~~~Aa~~~~~~~ta~~  133 (150)
T d1yb5a1          81 AFKKGDRVFTSS---------------------------TISGGYAEYALAADHTVYKLPEKLKPVIGSQYPLEKVAEAH  133 (150)
T ss_dssp             TCCTTCEEEESC---------------------------CSSCSSBSEEEEEGGGEEECCTTCCCCEEEEEEGGGHHHHH
T ss_pred             ccccCccccccc---------------------------cccccccccccccccccccccCCCCHHHHHHhhhhhhhehh
Confidence            999999998632                           347999999999999999999999999998664 6777887


Q ss_pred             HHH-hcCCCCCCEEEEE
Q 018075          170 ACR-RANVGPETNVMIM  185 (361)
Q Consensus       170 ~l~-~~~~~~g~~vlI~  185 (361)
                      .+. .+..++|+++||+
T Consensus       134 ~~~~~g~~~~G~~vliL  150 (150)
T d1yb5a1         134 ENIIHGSGATGKMILLL  150 (150)
T ss_dssp             HHHHHSSCCSSEEEEEC
T ss_pred             hheEEcCcccCCEEEEC
Confidence            764 5788999999984

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=2.3e-27  Score=188.37  Aligned_cols=133  Identities=22%  Similarity=0.260  Sum_probs=114.7

Q ss_pred             eCCceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEec
Q 018075           22 GIKTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALE  101 (361)
Q Consensus        22 ~~~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~  101 (361)
                      +|+.|++++++.|+|++|||+|||+++++|++|+++++|...   ....|+++|+|++|+|+++|+++++|++||||+..
T Consensus        11 ~pe~l~~~e~~~P~p~~~eVlVkv~a~~in~~D~~~~~G~~~---~~~~p~~~G~e~~G~V~~vG~~v~~~~vGdrV~~~   87 (147)
T d1qora1          11 GPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYP---PPSLPSGLGTEAAGIVSKVGSGVKHIKAGDRVVYA   87 (147)
T ss_dssp             SGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSC---CSSSSBCCCSCEEEEEEEECTTCCSCCTTCEEEES
T ss_pred             CCceeEEEEecCCCCCCCEEEEEEEEecccceeeeeecCCCC---CCcceeeeccccccceeeeeeecccccccceeeee
Confidence            456799999999999999999999999999999999987643   24789999999999999999999999999999752


Q ss_pred             CCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccc--cc-chhHHHHHHHHhcCCCC
Q 018075          102 PGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGA--MC-EPLSVGVHACRRANVGP  178 (361)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa--~~-~~~~~a~~~l~~~~~~~  178 (361)
                                                 ....|+|+||++++.+.++++|+++++++|+  .+ ....++++++...++++
T Consensus        88 ---------------------------~~~~G~~ae~~~v~~~~~~~~P~~~~~~~a~a~~~~~~~~~~~~~l~~~~~~~  140 (147)
T d1qora1          88 ---------------------------QSALGAYSSVHNIIADKAAILPAAIKVDVAEQQKYPLKDAQRAHEILESRATQ  140 (147)
T ss_dssp             ---------------------------CCSSCCSBSEEEEEGGGEEECCTTSCCCCCGGGEEEGGGHHHHHHHHHTTCCC
T ss_pred             ---------------------------ccccccceeEEEEehHHeEEcCcccchHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence                                       1246899999999999999999999887654  22 35667777776678999


Q ss_pred             CCEEEE
Q 018075          179 ETNVMI  184 (361)
Q Consensus       179 g~~vlI  184 (361)
                      |++|||
T Consensus       141 G~~VLI  146 (147)
T d1qora1         141 GSSLLI  146 (147)
T ss_dssp             BCCEEE
T ss_pred             CCEEEe
Confidence            999998

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.93  E-value=5.8e-26  Score=181.08  Aligned_cols=146  Identities=16%  Similarity=0.073  Sum_probs=115.0

Q ss_pred             ccceEEEEeeCC---ceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCC
Q 018075           13 NQNMAAWLLGIK---TLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEV   89 (361)
Q Consensus        13 ~~~~~~~~~~~~---~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v   89 (361)
                      .+++++++.+++   .+.+++++.|+|++|||||||+++|||++|++...|..  ......|+++|+|++|+|++  .++
T Consensus         2 ~~~KA~v~~~~~~~~~~~i~~v~~P~~~~~eVlVkV~a~gin~~D~~~~~g~~--~~~~~~p~v~g~e~~G~v~~--~~~   77 (152)
T d1xa0a1           2 SAFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDG--KIVKTYPFVPGIDLAGVVVS--SQH   77 (152)
T ss_dssp             CEEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGG--SSCCSSSBCCCSEEEEEEEE--CCS
T ss_pred             CceEEEEEEecCCceEEEEEEccCCCCCCCEEEEEEEEeCCChHHHHHHhhcc--cccccccceeeeeeeeeeec--cCC
Confidence            456777776553   46789999999999999999999999999998887753  23357899999999999999  556


Q ss_pred             CCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHH
Q 018075           90 KSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGV  168 (361)
Q Consensus        90 ~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~  168 (361)
                      +.|++||+|+.....                      .....+|+|+||+.++++.++++|++++. +||++ ....+||
T Consensus        78 ~~~~~g~~v~~~~~~----------------------~~~~~~G~~aEy~~v~~~~~~~iP~~l~~-~aa~l~~a~~ta~  134 (152)
T d1xa0a1          78 PRFREGDEVIATGYE----------------------IGVTHFGGYSEYARLHGEWLVPLPKGLER-IAQEISLAELPQA  134 (152)
T ss_dssp             SSCCTTCEEEEESTT----------------------BTTTBCCSSBSEEEECGGGCEECCTTHHH-HEEEEEGGGHHHH
T ss_pred             CccccCCEEEEecCc----------------------cccccCCCcceeeeehhhccccCCCCCCH-HHHHHHHHHHHHH
Confidence            789999999864211                      01234799999999999999999999985 55544 4556666


Q ss_pred             HHH-HhcCCCCCCEEEEEC
Q 018075          169 HAC-RRANVGPETNVMIMG  186 (361)
Q Consensus       169 ~~l-~~~~~~~g~~vlI~G  186 (361)
                      ..+ .+.+++ |++|||+|
T Consensus       135 ~~~~~~~~~~-G~tVL~l~  152 (152)
T d1xa0a1         135 LKRILRGELR-GRTVVRLA  152 (152)
T ss_dssp             HHHHHHTCCC-SEEEEECC
T ss_pred             HHHHHhcCCC-CCEEEEcC
Confidence            665 457765 99999975

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.93  E-value=1.1e-25  Score=183.51  Aligned_cols=167  Identities=21%  Similarity=0.315  Sum_probs=139.7

Q ss_pred             CCccccccc-chhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecC
Q 018075          153 VSLEEGAMC-EPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS  231 (361)
Q Consensus       153 ~~~~~aa~~-~~~~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  231 (361)
                      +|+++|+++ .+++|||++++++++++|++|||+|+|++|++++|+||.+|+.+|++++.+++|+++++++|+++++++.
T Consensus         1 ip~e~A~~l~~~~~ta~~a~~~a~~~~g~~VlI~GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~~~   80 (174)
T d1jqba2           1 MPLENAVMITDMMTTGFHGAELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNYK   80 (174)
T ss_dssp             SCHHHHHTTTTHHHHHHHHHHHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEECGG
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhhhhhhhcccccccccccchhhhHHHHHhhCcccccccc
Confidence            578899977 6899999999999999999999999999999999999999998899999999999999999999988764


Q ss_pred             CCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechH----hhhcCcEEEEeec
Q 018075          232 TDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTP----AAAREVDVIGIFR  307 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~----~~~~~~~i~~~~~  307 (361)
                      .  +++.+.+.++.  .+.++|+||||+|++..++.++++++++|+++.+|.......+++..    ...++.++.+...
T Consensus        81 ~--~~~~~~v~~~t--~g~G~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~  156 (174)
T d1jqba2          81 N--GHIEDQVMKLT--NGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLC  156 (174)
T ss_dssp             G--SCHHHHHHHHT--TTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSSSEEEEETTTTGGGTBCCEEEEBCC
T ss_pred             c--hhHHHHHHHHh--hccCcceEEEccCCHHHHHHHHHHHhcCCEEEEEeecCCCCcCcCcHhHHHHHhCccEEEEecC
Confidence            3  56666666654  47889999999998888999999999999999999776544443322    3456788888754


Q ss_pred             C--CCcHHHHHHHHHcCC
Q 018075          308 Y--RSTWPLCIEFLRSGK  323 (361)
Q Consensus       308 ~--~~~~~~~~~~l~~g~  323 (361)
                      .  +...+.+.+++++|+
T Consensus       157 ~~~r~~~e~l~~li~~gk  174 (174)
T d1jqba2         157 PGGRLRAERLRDMVVYNR  174 (174)
T ss_dssp             CCHHHHHHHHHHHHHTTS
T ss_pred             CCCcccHHHHHHHHHcCC
Confidence            3  445677888998875

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.93  E-value=2.8e-25  Score=181.11  Aligned_cols=167  Identities=23%  Similarity=0.332  Sum_probs=147.3

Q ss_pred             CCcccccccc-hhHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeec
Q 018075          153 VSLEEGAMCE-PLSVGVHACRRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKV  230 (361)
Q Consensus       153 ~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~  230 (361)
                      +++.+||++. .+.|||+++++.++++||+|||+| +|++|++++|+++.+|...|++++.+++|.++++++|++..+++
T Consensus         1 l~~~eAA~l~c~~~Ta~~al~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~~   80 (170)
T d1jvba2           1 LNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVINA   80 (170)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEET
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCceeecc
Confidence            4678888665 678899999999999999999999 59999999999999998889999999999999999999998875


Q ss_pred             CCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-C
Q 018075          231 STDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-R  309 (361)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~  309 (361)
                      +.  .++.+.+++..  .+.++|++|||+|++..++.++++++++|+++.+|......+++...++++++++.|++.+ +
T Consensus        81 ~~--~~~~~~~~~~~--~~~~~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~i~i~Gs~~~~~  156 (170)
T d1jvba2          81 SM--QDPLAEIRRIT--ESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQ  156 (170)
T ss_dssp             TT--SCHHHHHHHHT--TTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCCCCCHHHHHHHTCEEEECCSCCH
T ss_pred             CC--cCHHHHHHHHh--hcccchhhhcccccchHHHhhhhhcccCCEEEEeccccCccccCHHHHHhCCcEEEEEecCCH
Confidence            43  56666665543  4678999999999988899999999999999999988877788888899999999999876 6


Q ss_pred             CcHHHHHHHHHcCC
Q 018075          310 STWPLCIEFLRSGK  323 (361)
Q Consensus       310 ~~~~~~~~~l~~g~  323 (361)
                      ++++++++++++||
T Consensus       157 ~d~~~~l~lv~~GK  170 (170)
T d1jvba2         157 SDFLGIMRLAEAGK  170 (170)
T ss_dssp             HHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHcCC
Confidence            78999999999986

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.93  E-value=1.5e-24  Score=176.47  Aligned_cols=166  Identities=25%  Similarity=0.393  Sum_probs=137.5

Q ss_pred             Ccccccccc-hhHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecC
Q 018075          154 SLEEGAMCE-PLSVGVHACR-RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS  231 (361)
Q Consensus       154 ~~~~aa~~~-~~~~a~~~l~-~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  231 (361)
                      +++.||++. .+.|+|+++. .+++++||+|||+|+|++|++++|+++.+|+++|++++.+++|+++++++|+++++++.
T Consensus         2 ~Le~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~   81 (174)
T d1e3ia2           2 NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPR   81 (174)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCCc
Confidence            456778664 6889999975 59999999999999999999999999999998999999999999999999999998765


Q ss_pred             CCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCC-CEEEEEccCCCCcceechHhhhcCcEEEEeecC--
Q 018075          232 TDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY--  308 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~--  308 (361)
                      ..+.......+.   +.+.++|++|||+|.+..++.++++++++ |+++.+|......+++...+++ +.++.|++..  
T Consensus        82 ~~~~~~~~~~~~---~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~~~~~i~~~~~~~-~k~i~Gs~~Gs~  157 (174)
T d1e3ia2          82 ELDKPVQDVITE---LTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVIL-GRSINGTFFGGW  157 (174)
T ss_dssp             GCSSCHHHHHHH---HHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSEEEEEHHHHHT-TCEEEECSGGGC
T ss_pred             cchhhhhhhHhh---hhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCCCccccchHHHhc-cCEEEEEEeeCC
Confidence            433333333332   34789999999999999999999999996 9999999887776777666654 5688888643  


Q ss_pred             --CCcHHHHHHHHHcCC
Q 018075          309 --RSTWPLCIEFLRSGK  323 (361)
Q Consensus       309 --~~~~~~~~~~l~~g~  323 (361)
                        .+++.++++++++||
T Consensus       158 ~~~~d~p~li~l~~~GK  174 (174)
T d1e3ia2         158 KSVDSVPNLVSDYKNKK  174 (174)
T ss_dssp             CHHHHHHHHHHHHHTTS
T ss_pred             ChHHHHHHHHHHHHCcC
Confidence              457788889988886

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.92  E-value=1.1e-24  Score=178.01  Aligned_cols=166  Identities=23%  Similarity=0.406  Sum_probs=142.0

Q ss_pred             CCcccccccc-hhHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeec
Q 018075          153 VSLEEGAMCE-PLSVGVHACR-RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKV  230 (361)
Q Consensus       153 ~~~~~aa~~~-~~~~a~~~l~-~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~  230 (361)
                      +|++.|+++. .+.|||+++. .+++++|++|||+|+|++|++++|+|+.+|++++++++.+++|+++++++|+++++++
T Consensus         1 vP~e~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~~   80 (174)
T d1f8fa2           1 VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINS   80 (174)
T ss_dssp             SCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEET
T ss_pred             CCHHHHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCCCHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEEeC
Confidence            3667788665 5788999975 5899999999999999999999999999999888999999999999999999999886


Q ss_pred             CCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC--CcceechHhhhcCcEEEEeecC
Q 018075          231 STDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT--EMTVALTPAAAREVDVIGIFRY  308 (361)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~--~~~~~~~~~~~~~~~i~~~~~~  308 (361)
                      ..  +++.+.++++.   ++++|+||||+|++..++.+++.++++|+++.+|....  ..+++...++++++++.|++..
T Consensus        81 ~~--~~~~~~i~~~t---~gg~D~vid~~G~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~k~~~i~Gs~~g  155 (174)
T d1f8fa2          81 KT--QDPVAAIKEIT---DGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEG  155 (174)
T ss_dssp             TT--SCHHHHHHHHT---TSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGG
T ss_pred             CC--cCHHHHHHHHc---CCCCcEEEEcCCcHHHHHHHHhcccCceEEEEEeecCCCcccccCHHHHHHCCCEEEEEEec
Confidence            43  56777776664   56899999999998899999999999999999996543  3467777889999999998743


Q ss_pred             ----CCcHHHHHHHHHcCC
Q 018075          309 ----RSTWPLCIEFLRSGK  323 (361)
Q Consensus       309 ----~~~~~~~~~~l~~g~  323 (361)
                          +++++++++++++|+
T Consensus       156 ~~~~~~~~~~~~~l~~~Gk  174 (174)
T d1f8fa2         156 SGSPKKFIPELVRLYQQGK  174 (174)
T ss_dssp             GSCHHHHHHHHHHHHHTTS
T ss_pred             CCChHHHHHHHHHHHHcCC
Confidence                457889999999986

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.92  E-value=6.3e-24  Score=173.11  Aligned_cols=166  Identities=22%  Similarity=0.294  Sum_probs=137.1

Q ss_pred             ccccccc-chhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCC
Q 018075          155 LEEGAMC-EPLSVGVHAC-RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST  232 (361)
Q Consensus       155 ~~~aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~  232 (361)
                      +.+||++ +.+.|||+++ +.+++++||+|||+|+|++|++++|+||.+|+.+|++++.+++|+++++++|+++++++..
T Consensus         2 P~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~GaGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~~   81 (174)
T d1p0fa2           2 PLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKD   81 (174)
T ss_dssp             CGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGG
T ss_pred             HHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCCC
Confidence            4567766 4789999997 4589999999999999999999999999999989999999999999999999999998765


Q ss_pred             CccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcC-CCEEEEEccCCCCcceechH-hhhcCcEEEEeecC--
Q 018075          233 DIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRP-GGKVCLIGLAKTEMTVALTP-AAAREVDVIGIFRY--  308 (361)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~-~G~~v~~g~~~~~~~~~~~~-~~~~~~~i~~~~~~--  308 (361)
                      .+....+..+.   +.++++|++||++|.+..++..+..+++ +|+++.+|......+++... .+.++.+++|++..  
T Consensus        82 ~d~~~~~~~~~---~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~  158 (174)
T d1p0fa2          82 YDKPIYEVICE---KTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGF  158 (174)
T ss_dssp             CSSCHHHHHHH---HTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTCEEEECSGGGC
T ss_pred             chhHHHHHHHH---hcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCccccccCHHHHhCCCEEEEEEeCCC
Confidence            43333333332   3467999999999999888999998877 59999999876666666653 45678899998743  


Q ss_pred             -CCcHHHHHHHHHcCC
Q 018075          309 -RSTWPLCIEFLRSGK  323 (361)
Q Consensus       309 -~~~~~~~~~~l~~g~  323 (361)
                       .++++++++++++|+
T Consensus       159 ~~~d~~~lidl~~~gK  174 (174)
T d1p0fa2         159 KGEEVSRLVDDYMKKK  174 (174)
T ss_dssp             CGGGHHHHHHHHHTTS
T ss_pred             CHHHHHHHHHHHHcCC
Confidence             568999999999986

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=7.7e-25  Score=179.07  Aligned_cols=163  Identities=23%  Similarity=0.340  Sum_probs=137.2

Q ss_pred             CCccccccc-chhHHHHHHHHh-cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEee
Q 018075          153 VSLEEGAMC-EPLSVGVHACRR-ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAK  229 (361)
Q Consensus       153 ~~~~~aa~~-~~~~~a~~~l~~-~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~  229 (361)
                      +|+++||++ .++.|||+++.+ +++++|++|||+| +|++|++++|+|+.+|+ .++++++++++.++++++|++.+++
T Consensus         1 ls~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~vi~   79 (174)
T d1yb5a2           1 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFN   79 (174)
T ss_dssp             SCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEE
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCc-ccccccccccccccccccCcccccc
Confidence            578999866 489999999865 8899999999999 59999999999999999 6888888899999999999999988


Q ss_pred             cCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-
Q 018075          230 VSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-  308 (361)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-  308 (361)
                      +.+  .++.+.+++..  .+.++|++||++|++ .++.++++|+++|+++.+|... ..+++...++.++.++.|+..+ 
T Consensus        80 ~~~--~~~~~~i~~~t--~~~g~d~v~d~~g~~-~~~~~~~~l~~~G~iv~~G~~~-~~~~~~~~~~~k~~~i~g~~~~~  153 (174)
T d1yb5a2          80 HRE--VNYIDKIKKYV--GEKGIDIIIEMLANV-NLSKDLSLLSHGGRVIVVGSRG-TIEINPRDTMAKESSIIGVTLFS  153 (174)
T ss_dssp             TTS--TTHHHHHHHHH--CTTCEEEEEESCHHH-HHHHHHHHEEEEEEEEECCCCS-CEEECTHHHHTTTCEEEECCGGG
T ss_pred             ccc--ccHHHHhhhhh--ccCCceEEeecccHH-HHHHHHhccCCCCEEEEEecCC-CCCCCHHHHHHCCCEEEEEEecC
Confidence            643  57777776654  478899999999965 9999999999999999998654 3467777889999999998654 


Q ss_pred             --CCcHHHHHHHHHcC
Q 018075          309 --RSTWPLCIEFLRSG  322 (361)
Q Consensus       309 --~~~~~~~~~~l~~g  322 (361)
                        +++++++.+++++|
T Consensus       154 ~~~~~~~~~~~~l~~g  169 (174)
T d1yb5a2         154 STKEEFQQYAAALQAG  169 (174)
T ss_dssp             CCHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHH
Confidence              44677777777654

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.92  E-value=1.4e-24  Score=176.17  Aligned_cols=164  Identities=23%  Similarity=0.316  Sum_probs=142.1

Q ss_pred             CCcccccccc-hhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecC
Q 018075          153 VSLEEGAMCE-PLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS  231 (361)
Q Consensus       153 ~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  231 (361)
                      +++++||.++ ++.|||++++++++++|++|+|+|+|++|++++|+||.+|+ +|++++++++|+++++++|++.++++.
T Consensus         1 v~f~~aA~l~ca~~Ta~~al~~~~~~~g~~VlV~GaG~vG~~~~~~ak~~G~-~Vi~~~~~~~~~~~a~~~Ga~~~i~~~   79 (166)
T d1llua2           1 VEFAEIAPILCAGVTVYKGLKQTNARPGQWVAISGIGGLGHVAVQYARAMGL-HVAAIDIDDAKLELARKLGASLTVNAR   79 (166)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEETT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEeeccccHHHHHHHHHHcCC-ccceecchhhHHHhhhccCcccccccc
Confidence            4788988665 77899999998999999999999999999999999999998 799999999999999999999988854


Q ss_pred             CCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-CC
Q 018075          232 TDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RS  310 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~  310 (361)
                      .  +++.+.+.+.    ..+.+.++++.+++..++.++++|+++|+++.+|......+++...++.+++++.|++.+ ++
T Consensus        80 ~--~~~~~~~~~~----~~g~~~~i~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~Gs~~~~~~  153 (166)
T d1llua2          80 Q--EDPVEAIQRD----IGGAHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPPGDFPTPIFDVVLKGLHIAGSIVGTRA  153 (166)
T ss_dssp             T--SCHHHHHHHH----HSSEEEEEECCSCHHHHHHHHTTEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHH
T ss_pred             c--hhHHHHHHHh----hcCCcccccccccchHHHHHHHHhcCCcEEEEEEecCCCccCCHHHHHhCCcEEEEEeecCHH
Confidence            3  4555555443    245777777777788999999999999999999988777788888899999999999876 67


Q ss_pred             cHHHHHHHHHcCC
Q 018075          311 TWPLCIEFLRSGK  323 (361)
Q Consensus       311 ~~~~~~~~l~~g~  323 (361)
                      +++++++++++|.
T Consensus       154 d~~e~l~l~~~Gl  166 (166)
T d1llua2         154 DLQEALDFAGEGL  166 (166)
T ss_dssp             HHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHCcC
Confidence            8999999999873

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.92  E-value=3.4e-25  Score=171.11  Aligned_cols=128  Identities=20%  Similarity=0.203  Sum_probs=108.4

Q ss_pred             ceEEEEeeC-CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCC
Q 018075           15 NMAAWLLGI-KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLE   93 (361)
Q Consensus        15 ~~~~~~~~~-~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~   93 (361)
                      |+++++.+. ++++++|++.|+|+++||+|||+++|||++|++..+|...  ....+|+++|+|++|+|           
T Consensus         1 MkA~~~~~~G~~l~~~e~~~p~p~~~eVlVkv~a~gin~~D~~~~~G~~~--~~~~~P~v~G~E~~G~V-----------   67 (131)
T d1iz0a1           1 MKAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYL--TRLHPPFIPGMEVVGVV-----------   67 (131)
T ss_dssp             CEEEEECSTTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSS--SCCCSSBCCCCEEEEEE-----------
T ss_pred             CcEEEEccCCCCCEEEEccCCCCCCCEEEEEEEEEecccccccccccccc--ccccceeEeeeeeEEee-----------
Confidence            455556665 4699999999999999999999999999999999887542  23478999999999998           


Q ss_pred             CCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccccc-chhHHHHHHHH
Q 018075           94 VGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMC-EPLSVGVHACR  172 (361)
Q Consensus        94 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~-~~~~~a~~~l~  172 (361)
                      +||||++.                            ..+|+|+||+.++++.++++|+++++++||.+ .++.|||+++.
T Consensus        68 vGd~V~~~----------------------------~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~Ta~~al~  119 (131)
T d1iz0a1          68 EGRRYAAL----------------------------VPQGGLAERVAVPKGALLPLPEGRPVVGPVFPFAEAEAAFRALL  119 (131)
T ss_dssp             TTEEEEEE----------------------------CSSCCSBSEEEEEGGGCEECCTTCCCEEEEEEGGGHHHHHHHTT
T ss_pred             ccceEEEE----------------------------eccCccceeeeeCHHHeEEccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            39999863                            24799999999999999999999999999966 57889999986


Q ss_pred             h-cCCCCCCEEEEE
Q 018075          173 R-ANVGPETNVMIM  185 (361)
Q Consensus       173 ~-~~~~~g~~vlI~  185 (361)
                      + +  +.|++||++
T Consensus       120 ~~g--~~g~tvl~l  131 (131)
T d1iz0a1         120 DRG--HTGKVVVRL  131 (131)
T ss_dssp             CTT--CCBEEEEEC
T ss_pred             hcc--cCCCEEEEC
Confidence            5 4  569999863

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.92  E-value=3.5e-24  Score=176.44  Aligned_cols=165  Identities=22%  Similarity=0.322  Sum_probs=135.6

Q ss_pred             cccc-ccchhHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCC
Q 018075          156 EEGA-MCEPLSVGVHACRR-ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTD  233 (361)
Q Consensus       156 ~~aa-~~~~~~~a~~~l~~-~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~  233 (361)
                      +.+| ++++..|||+++.+ .++++|++|||+|+|++|++++|+|+.+|+..|++++.+++|+++++++|++.++++.+ 
T Consensus         4 ~~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~GaG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~-   82 (182)
T d1vj0a2           4 DVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRRE-   82 (182)
T ss_dssp             HHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETTT-
T ss_pred             HHHHHhhcHHHHHHHHHHHHhCCCCCCEEEEECCCccchhheecccccccccccccccccccccccccccceEEEeccc-
Confidence            3344 55577899999976 78999999999999999999999999999988999999999999999999999988644 


Q ss_pred             ccchhHHHHHHHh-hcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceech---HhhhcCcEEEEeecC-
Q 018075          234 IEDVDTDVGKIQN-AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT---PAAAREVDVIGIFRY-  308 (361)
Q Consensus       234 ~~~~~~~~~~~~~-~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~~~~~~~i~~~~~~-  308 (361)
                       .+..+..+.+.+ ..+.++|+||||+|++..++.++++++++|+++.+|......+++..   .++.+++++.|++.+ 
T Consensus        83 -~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~G~iv~~G~~~~~~~~~~~~~~~l~~k~l~i~G~~~~~  161 (182)
T d1vj0a2          83 -TSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSD  161 (182)
T ss_dssp             -SCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCCCC
T ss_pred             -cchHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCCCEEEEEeecCCCCccccccHHHHHHCCcEEEEEEeCC
Confidence             444444444333 24678999999999987899999999999999999976544444433   356899999999887 


Q ss_pred             CCcHHHHHHHHHcC
Q 018075          309 RSTWPLCIEFLRSG  322 (361)
Q Consensus       309 ~~~~~~~~~~l~~g  322 (361)
                      .+++++++++++++
T Consensus       162 ~~~~~~~~~~i~~~  175 (182)
T d1vj0a2         162 TSHFVKTVSITSRN  175 (182)
T ss_dssp             HHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHC
Confidence            66788999998875

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.91  E-value=8.5e-24  Score=171.90  Aligned_cols=165  Identities=25%  Similarity=0.367  Sum_probs=144.1

Q ss_pred             CCcccccccc-hhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecC
Q 018075          153 VSLEEGAMCE-PLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS  231 (361)
Q Consensus       153 ~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  231 (361)
                      +|+++||+++ ++.|||+++++.+++||++|||+|+|++|++++|+++..|+ +|++++++++|+++++++|++.++++.
T Consensus         1 ls~eeAA~l~~~~~Ta~~al~~~~~~~g~~vlv~G~G~iG~~a~~~a~~~g~-~v~~~~~~~~r~~~~k~~Ga~~~~~~~   79 (168)
T d1rjwa2           1 LSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNPL   79 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHHTCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEeecccchhhhhHHHhcCCC-eEeccCCCHHHhhhhhhcCcceecccc
Confidence            5789999775 67889999999999999999999999999999999999999 689999999999999999999988754


Q ss_pred             CCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-CC
Q 018075          232 TDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RS  310 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~  310 (361)
                      .  .++.+.+++..    .+.+.++++.+++..++.++++++++|+++.+|.......++...++.+++++.|+..+ ++
T Consensus        80 ~--~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~a~~~l~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~gs~~~~~~  153 (168)
T d1rjwa2          80 K--EDAAKFMKEKV----GGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRK  153 (168)
T ss_dssp             T--SCHHHHHHHHH----SSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHH
T ss_pred             c--chhhhhccccc----CCCceEEeecCCHHHHHHHHHHhccCCceEecccccCCCCCCHHHHHHCCcEEEEEeeCCHH
Confidence            4  56666666553    35566667777787999999999999999999988887788888899999999999866 67


Q ss_pred             cHHHHHHHHHcCCC
Q 018075          311 TWPLCIEFLRSGKI  324 (361)
Q Consensus       311 ~~~~~~~~l~~g~~  324 (361)
                      +++++++++++|++
T Consensus       154 ~~~~~l~l~~~Gki  167 (168)
T d1rjwa2         154 DLQEALQFAAEGKV  167 (168)
T ss_dssp             HHHHHHHHHHTTSC
T ss_pred             HHHHHHHHHHhCCC
Confidence            89999999999998

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.91  E-value=2.8e-24  Score=175.30  Aligned_cols=163  Identities=23%  Similarity=0.316  Sum_probs=138.1

Q ss_pred             ccccccc-chhHHHHHHHHh-c-CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecC
Q 018075          155 LEEGAMC-EPLSVGVHACRR-A-NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS  231 (361)
Q Consensus       155 ~~~aa~~-~~~~~a~~~l~~-~-~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  231 (361)
                      +.++|++ .++.|||+++++ . .+++|++|||+|+|++|++++|+++.+|+.++++++.+++|+++++++|+++++++.
T Consensus         6 l~eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~~   85 (172)
T d1h2ba2           6 LVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDAR   85 (172)
T ss_dssp             HHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETT
T ss_pred             HHHHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCCChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeecCc
Confidence            3455544 578999999976 3 589999999999999999999999999998999999999999999999999998864


Q ss_pred             CCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-CC
Q 018075          232 TDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-RS  310 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~~  310 (361)
                      +   +..+...+.  +.+.++|+|||++|+...++.+++.++++|+++.+|... ..+++...++.+++++.|++.+ ++
T Consensus        86 ~---~~~~~~~~~--~~~~g~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~-~~~~~~~~l~~k~~~i~Gs~~~~~~  159 (172)
T d1h2ba2          86 R---DPVKQVMEL--TRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYGG-ELRFPTIRVISSEVSFEGSLVGNYV  159 (172)
T ss_dssp             S---CHHHHHHHH--TTTCCEEEEEESSCCHHHHHHGGGGEEEEEEEEECCCSS-CCCCCHHHHHHTTCEEEECCSCCHH
T ss_pred             c---cHHHHHHHh--hCCCCceEEEEecCcchHHHHHHHHHhCCCEEEEEeCcc-cccCCHHHHHhCCcEEEEEEecCHH
Confidence            3   333333332  357889999999999888999999999999999999654 3567778899999999999876 67


Q ss_pred             cHHHHHHHHHcCC
Q 018075          311 TWPLCIEFLRSGK  323 (361)
Q Consensus       311 ~~~~~~~~l~~g~  323 (361)
                      +++++++++++|+
T Consensus       160 d~~~~l~l~~~GK  172 (172)
T d1h2ba2         160 ELHELVTLALQGK  172 (172)
T ss_dssp             HHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHcCC
Confidence            8999999999986

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.91  E-value=2e-23  Score=171.01  Aligned_cols=167  Identities=23%  Similarity=0.297  Sum_probs=135.2

Q ss_pred             Ccccccccc-hhHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecC
Q 018075          154 SLEEGAMCE-PLSVGVHACR-RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS  231 (361)
Q Consensus       154 ~~~~aa~~~-~~~~a~~~l~-~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  231 (361)
                      |+++||++. .+.|+|+++. +++++|||+|||+|+|++|++++|+++.+|+.+|++++++++|+++++++|+++++++.
T Consensus         2 P~e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~GaGGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~~   81 (176)
T d2fzwa2           2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQ   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecchhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeCC
Confidence            567788775 6889999985 58999999999999999999999999999998999999999999999999999999876


Q ss_pred             CCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCC-C-CcceechHhhhcCcEEEEeecC-
Q 018075          232 TDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK-T-EMTVALTPAAAREVDVIGIFRY-  308 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~-~~~~~~~~~~~~~~~i~~~~~~-  308 (361)
                      ....+..+.++.   ..+.++|+|||++|.+..++.+...++++|+++.++... . .........+.++.++.|+... 
T Consensus        82 ~~~~~~~~~~~~---~~~~g~D~vid~~G~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~  158 (176)
T d2fzwa2          82 DFSKPIQEVLIE---MTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGG  158 (176)
T ss_dssp             GCSSCHHHHHHH---HTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGG
T ss_pred             chhhHHHHHHHH---HcCCCCcEeeecCCCHHHHHHHHHhhcCCceeEEEEeeccccccccccHHHHHCCCEEEEEeeeC
Confidence            544455444443   346799999999999888899999999998888775333 2 2333444456678899998754 


Q ss_pred             ---CCcHHHHHHHHHcCC
Q 018075          309 ---RSTWPLCIEFLRSGK  323 (361)
Q Consensus       309 ---~~~~~~~~~~l~~g~  323 (361)
                         .+++.++++++++||
T Consensus       159 ~~~~~d~~~li~l~~~GK  176 (176)
T d2fzwa2         159 WKSVESVPKLVSEYMSKK  176 (176)
T ss_dssp             CCHHHHHHHHHHHHHTTS
T ss_pred             CcHHHHHHHHHHHHHcCC
Confidence               456788899998886

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.91  E-value=2.1e-24  Score=175.16  Aligned_cols=165  Identities=20%  Similarity=0.216  Sum_probs=131.1

Q ss_pred             CCcccccccc-hhHHHHHHHH----hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCE
Q 018075          153 VSLEEGAMCE-PLSVGVHACR----RANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE  226 (361)
Q Consensus       153 ~~~~~aa~~~-~~~~a~~~l~----~~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~  226 (361)
                      +++++||.++ +..|||++++    .++.++|++|||+| +|++|.+++|+||..|+ .|+++.+++++.++++++|+++
T Consensus         1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga-~Viat~~s~~k~~~~~~lGa~~   79 (176)
T d1xa0a2           1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLGAKE   79 (176)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTTCSE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCC-ceEEecCchHHHHHHHhcccce
Confidence            5789999876 6789997753    37788999999998 69999999999999999 5888889999999999999999


Q ss_pred             EeecCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCC-CCcceechHhhhcCcEEEEe
Q 018075          227 TAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK-TEMTVALTPAAAREVDVIGI  305 (361)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~  305 (361)
                      +++++.   .+.+.++   .+.+.++|+|||++|++ .++.++++|+++|+++.+|... ...+++...++.+++++.|.
T Consensus        80 vi~~~~---~~~~~~~---~~~~~gvD~vid~vgg~-~~~~~l~~l~~~Griv~~G~~~g~~~~~~~~~~~~k~~~i~Gv  152 (176)
T d1xa0a2          80 VLARED---VMAERIR---PLDKQRWAAAVDPVGGR-TLATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGI  152 (176)
T ss_dssp             EEECC---------------CCSCCEEEEEECSTTT-THHHHHHTEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEEC
T ss_pred             eeecch---hHHHHHH---HhhccCcCEEEEcCCch-hHHHHHHHhCCCceEEEeecccCcccCCCHHHHHHCCcEEEEE
Confidence            998643   2333332   33578999999999987 9999999999999999999764 45678888999999999997


Q ss_pred             ecCC---CcHHHHHHHHHcCCCCC
Q 018075          306 FRYR---STWPLCIEFLRSGKIDV  326 (361)
Q Consensus       306 ~~~~---~~~~~~~~~l~~g~~~~  326 (361)
                      ....   +....+++.+. |+++|
T Consensus       153 ~~~~~~~~~~~~~~~~la-g~lkP  175 (176)
T d1xa0a2         153 DSVYCPMDLRLRIWERLA-GDLKP  175 (176)
T ss_dssp             CSSSCCHHHHHHHHHHHH-TTTCC
T ss_pred             eCCcCCHHHHHHHHHHHh-cccCC
Confidence            6542   44555566653 76743

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.91  E-value=1.5e-24  Score=176.22  Aligned_cols=162  Identities=19%  Similarity=0.186  Sum_probs=137.6

Q ss_pred             Cccccccc-chhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCC
Q 018075          154 SLEEGAMC-EPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST  232 (361)
Q Consensus       154 ~~~~aa~~-~~~~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~  232 (361)
                      |.+.||.+ +...|||+++++.++++||+|||+|+|++|++++|+||.+|+ +|++++.+++|.++++++|+++++++.+
T Consensus         2 p~e~AApl~cag~Ta~~al~~~~~~~g~~vlI~GaG~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~a~~lGa~~~i~~~~   80 (168)
T d1piwa2           2 PSHLAAPLLCGGLTVYSPLVRNGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMGADHYIATLE   80 (168)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHHTTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEEGGG
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEECCCCcchhHHHHhhhccc-cccccccchhHHHHhhccCCcEEeeccc
Confidence            44567655 467889999999999999999999999999999999999999 6888999999999999999999887643


Q ss_pred             CccchhHHHHHHHhhcCCCccEEEEccCChH--HHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEEEEeecC-C
Q 018075          233 DIEDVDTDVGKIQNAMGSGIDVSFDCVGFDK--TMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDVIGIFRY-R  309 (361)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~-~  309 (361)
                      . .++   .+.    ...++|.++||+++..  .++.++++++++|+++.+|.......++...++.+++++.|+..+ +
T Consensus        81 ~-~~~---~~~----~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~Gs~~g~~  152 (168)
T d1piwa2          81 E-GDW---GEK----YFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHEMLSLKPYGLKAVSISYSALGSI  152 (168)
T ss_dssp             T-SCH---HHH----SCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCSSCCEEECGGGCBSCEEEECCCCCH
T ss_pred             h-HHH---HHh----hhcccceEEEEecCCccchHHHHHHHhhccceEEEeccccccccccHHHHHhCCcEEEEEeeCCH
Confidence            2 222   222    2568999999988652  367889999999999999988877788888999999999998765 7


Q ss_pred             CcHHHHHHHHHcCCC
Q 018075          310 STWPLCIEFLRSGKI  324 (361)
Q Consensus       310 ~~~~~~~~~l~~g~~  324 (361)
                      ++++++++++++|++
T Consensus       153 ~~~~e~l~li~~gkI  167 (168)
T d1piwa2         153 KELNQLLKLVSEKDI  167 (168)
T ss_dssp             HHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHhCCC
Confidence            789999999999998

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.91  E-value=7.4e-24  Score=174.76  Aligned_cols=167  Identities=19%  Similarity=0.294  Sum_probs=134.6

Q ss_pred             cccccc-chhHHHHHHHHh-cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCC
Q 018075          156 EEGAMC-EPLSVGVHACRR-ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST  232 (361)
Q Consensus       156 ~~aa~~-~~~~~a~~~l~~-~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~  232 (361)
                      +|||++ .++.|||+++.+ +++++||+|||+| +|++|++++|+|+..|+ .++++++++++.+.++++|++++++++ 
T Consensus         1 eeAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~-~vi~~~~~~~~~~~l~~~Ga~~vi~~~-   78 (183)
T d1pqwa_           1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSRLGVEYVGDSR-   78 (183)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHTTCCSEEEETT-
T ss_pred             CchhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccc-cceeeecccccccccccccccccccCC-
Confidence            466655 488999999865 7899999999998 59999999999999999 677777889999999999999998854 


Q ss_pred             CccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCCcc-eechHhhhcCcEEEEeecC---
Q 018075          233 DIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTEMT-VALTPAAAREVDVIGIFRY---  308 (361)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~-~~~~~~~~~~~~i~~~~~~---  308 (361)
                       .+++.+.++++.  .+.++|++||++|++ +++.++++|+++|+++.+|....... ........++.++.++...   
T Consensus        79 -~~~~~~~v~~~t--~~~g~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (183)
T d1pqwa_          79 -SVDFADEILELT--DGYGVDVVLNSLAGE-AIQRGVQILAPGGRFIELGKKDVYADASLGLAALAKSASFSVVDLDLNL  154 (183)
T ss_dssp             -CSTHHHHHHHHT--TTCCEEEEEECCCTH-HHHHHHHTEEEEEEEEECSCGGGTTTCEEEGGGGTTTCEEEECCHHHHH
T ss_pred             -ccCHHHHHHHHh--CCCCEEEEEecccch-HHHHHHHHhcCCCEEEEEccCCCCCCcccchHHHhCCcEEEEEEcccee
Confidence             367777776654  478999999999976 99999999999999999986543222 2222344677888877532   


Q ss_pred             -------CCcHHHHHHHHHcCCCCCCC
Q 018075          309 -------RSTWPLCIEFLRSGKIDVKP  328 (361)
Q Consensus       309 -------~~~~~~~~~~l~~g~~~~~~  328 (361)
                             ++.++++++++++|++++.|
T Consensus       155 ~~~~~~~~~~~~~v~~~i~~G~i~p~P  181 (183)
T d1pqwa_         155 KLQPARYRQLLQHILQHVADGKLEVLP  181 (183)
T ss_dssp             HHCHHHHHHHHHHHHHHHHTTSSCCCC
T ss_pred             ccCHHHHHHHHHHHHHHHHCCCCceeC
Confidence                   45688899999999996543

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.90  E-value=5.9e-24  Score=175.98  Aligned_cols=169  Identities=14%  Similarity=0.201  Sum_probs=135.0

Q ss_pred             CCcccccccc-hhHHHHHHHHh-cCCCCCCEEEEE-C-CCHHHHHHHHHHHHcCCCEEEEEeCC----hhHHHHHHHcCC
Q 018075          153 VSLEEGAMCE-PLSVGVHACRR-ANVGPETNVMIM-G-SGPIGLVTLLAARAFGAPRIIITDVD----VQRLSIARNLGA  224 (361)
Q Consensus       153 ~~~~~aa~~~-~~~~a~~~l~~-~~~~~g~~vlI~-G-~g~~G~~ai~la~~~g~~~vv~v~~~----~~~~~~~~~lg~  224 (361)
                      +|+++||+++ ++.|||+++.. .+++||++++|+ | +|++|++++|+||.+|++ +|++.++    +++.+.++++|+
T Consensus         1 ls~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~-vI~~v~~~~~~~~~~~~~~~lGa   79 (189)
T d1gu7a2           1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFN-SISVIRDRPNLDEVVASLKELGA   79 (189)
T ss_dssp             CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCE-EEEEECCCTTHHHHHHHHHHHTC
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCCe-EEEEEecccccchHHhhhhhccc
Confidence            5789998665 88999999976 899999999997 5 599999999999999995 5555433    245677899999


Q ss_pred             CEEeecCC-CccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccC-CCCcceechHhhhcCcEE
Q 018075          225 DETAKVST-DIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA-KTEMTVALTPAAAREVDV  302 (361)
Q Consensus       225 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~-~~~~~~~~~~~~~~~~~i  302 (361)
                      +++++++. +..++.+.++++....+.++|++||++|++ .+..++++|+++|+++.+|.. ....+++...++++++++
T Consensus        80 d~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~l~~k~~~i  158 (189)
T d1gu7a2          80 TQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGK-SSTGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTS  158 (189)
T ss_dssp             SEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHH-HHHHHHHTSCTTCEEEECCCCSSCCEEECHHHHHHSCCEE
T ss_pred             cEEEeccccchhHHHHHHHHHHhhccCCceEEEECCCcc-hhhhhhhhhcCCcEEEEECCccCCCccCcHHHHHHCCcEE
Confidence            99998643 233455566666666678999999999966 899999999999999999954 445667888889999999


Q ss_pred             EEeecC----------CCcHHHHHHHHHcCC
Q 018075          303 IGIFRY----------RSTWPLCIEFLRSGK  323 (361)
Q Consensus       303 ~~~~~~----------~~~~~~~~~~l~~g~  323 (361)
                      .|++..          .+.++++++++++|+
T Consensus       159 ~G~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk  189 (189)
T d1gu7a2         159 AGFWVTELLKNNKELKTSTLNQIIAWYEEGK  189 (189)
T ss_dssp             EECCHHHHHTTCHHHHHHHHHHHHHHHHHTC
T ss_pred             EEEEehHhhhhCHHHHHHHHHHHHHHHHcCC
Confidence            997543          245777888888775

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.90  E-value=1.6e-23  Score=172.37  Aligned_cols=159  Identities=18%  Similarity=0.248  Sum_probs=128.8

Q ss_pred             ccccchhHHHHHHHHh-cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCcc
Q 018075          158 GAMCEPLSVGVHACRR-ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIE  235 (361)
Q Consensus       158 aa~~~~~~~a~~~l~~-~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~  235 (361)
                      +++.+++.|||+++.+ +++++||+|||+| +|++|++++|+||..|+ +|+++++++++.++++++|+++++++..  +
T Consensus         8 ~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~Ga~~vi~~~~--~   84 (182)
T d1v3va2           8 GTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQIGFDAAFNYKT--V   84 (182)
T ss_dssp             TTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTS--C
T ss_pred             HHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCC-EEEEeCCCHHHHHHHHhhhhhhhccccc--c
Confidence            4444678899999975 8999999999998 58999999999999999 7899999999999999999999988643  4


Q ss_pred             chhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC-------CcceechHhhhcCcEEEEeecC
Q 018075          236 DVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-------EMTVALTPAAAREVDVIGIFRY  308 (361)
Q Consensus       236 ~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-------~~~~~~~~~~~~~~~i~~~~~~  308 (361)
                      ++.+.+.+.  +.+.++|+|||++|++ .++.++++|+++|+++.+|....       ...+....+++++.++.|++..
T Consensus        85 ~~~~~~~~~--~~~~Gvd~v~D~vG~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~~~  161 (182)
T d1v3va2          85 NSLEEALKK--ASPDGYDCYFDNVGGE-FLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVY  161 (182)
T ss_dssp             SCHHHHHHH--HCTTCEEEEEESSCHH-HHHHHGGGEEEEEEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECCGG
T ss_pred             cHHHHHHHH--hhcCCCceeEEecCch-hhhhhhhhccCCCeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEEEe
Confidence            555554433  3578999999999965 99999999999999999984321       1234456788999999998654


Q ss_pred             -------CCcHHHHHHHHHcC
Q 018075          309 -------RSTWPLCIEFLRSG  322 (361)
Q Consensus       309 -------~~~~~~~~~~l~~g  322 (361)
                             .+.++++++++++|
T Consensus       162 ~~~~~~~~~~~~~l~~~i~~G  182 (182)
T d1v3va2         162 RWQGDVREKALRDLMKWVLEG  182 (182)
T ss_dssp             GCCHHHHHHHHHHHHHHHHTT
T ss_pred             ccChHHHHHHHHHHHHHHhCc
Confidence                   23467788888776

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=2.9e-23  Score=163.53  Aligned_cols=128  Identities=18%  Similarity=0.127  Sum_probs=103.5

Q ss_pred             ceEEEEeeC---CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCC
Q 018075           15 NMAAWLLGI---KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKS   91 (361)
Q Consensus        15 ~~~~~~~~~---~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~   91 (361)
                      |++.++.++   ..+++++++.|+|++|||+|||+|+|||++|++...|...  .....|+++|+|++|+|+++|.+  .
T Consensus         1 MkA~v~~~~~~~~~l~i~~v~~p~~~~geVlVkV~a~gin~~D~~~~~G~~~--~~~~~p~v~G~e~~G~V~~~~~~--~   76 (146)
T d1o89a1           1 LQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGK--IIRNFPMIPGIDFAGTVRTSEDP--R   76 (146)
T ss_dssp             CEEEEEECC---CEEEEEECCGGGSCSCSEEEEEEEEECCHHHHHHHHTCSS--CCCSSSBCCCSEEEEEEEEECST--T
T ss_pred             CeEEEEEcCCCceEEEEEEcCCCCCCCCEEEEEEeeccCccceeeEEEeecc--cccccceeccccccccceeeccC--C
Confidence            456666644   4488999999999999999999999999999988877532  23567999999999999998775  5


Q ss_pred             CCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccch-hHHHH
Q 018075           92 LEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCEP-LSVGV  168 (361)
Q Consensus        92 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~~-~~~a~  168 (361)
                      +++||+|+.....                      -+....|+|+||+++++++++++|+++|+++||++++ ..||+
T Consensus        77 ~~~g~~v~~~~~~----------------------~g~~~~G~~Aey~~v~~~~vv~lP~~ls~~eAA~l~~a~~tA~  132 (146)
T d1o89a1          77 FHAGQEVLLTGWG----------------------VGENHWGGLAEQARVKGDWLVAMPQGQAAKEISLSEAPNFAEA  132 (146)
T ss_dssp             CCTTCEEEEECTT----------------------BTTTBCCSSBSEEEECGGGCEECCTTSCCEEECGGGHHHHHHH
T ss_pred             ccceeeEEeeccc----------------------ceecCCCcceeeeeeeeeeEEECCCCCCHHHHHHHHHHHHHHH
Confidence            8999999864211                      0123579999999999999999999999999998764 34443

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.89  E-value=2.8e-26  Score=188.08  Aligned_cols=157  Identities=17%  Similarity=0.103  Sum_probs=123.3

Q ss_pred             ccceEEEEeeCC----c--eEEEEecCCCCCCCcEEEEEeeeecCcchhhhhccccccc-------ccCCCCcccCccee
Q 018075           13 NQNMAAWLLGIK----T--LKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCAN-------FIVKKPMVIGHECA   79 (361)
Q Consensus        13 ~~~~~~~~~~~~----~--l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~-------~~~~~p~~~G~e~~   79 (361)
                      .+++++++.+++    .  ++..++|.|+|+++||||||+++|||++|++.++|.....       .....|+++|+|++
T Consensus         2 ~t~kA~v~~~~G~p~~~l~l~~~~~p~p~~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~G~e~~   81 (175)
T d1gu7a1           2 ITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGL   81 (175)
T ss_dssp             EEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCCE
T ss_pred             ceeEEEEEccCCCcccccEEEEEECCCCCCCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCcccccccc
Confidence            355666666442    2  4455777888899999999999999999999988753221       12367889999999


Q ss_pred             EEEEEeCCCCCCCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCccccc
Q 018075           80 GIIEEVGSEVKSLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGA  159 (361)
Q Consensus        80 G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa  159 (361)
                      |+|+++|.+++.++.||+|...                           ....|+|+||+++++++++++|++++.+.|+
T Consensus        82 g~V~~~~~~~~~~~~g~~v~~~---------------------------~~~~g~~aey~~v~~~~~~~iP~~~~~~~a~  134 (175)
T d1gu7a1          82 FEVIKVGSNVSSLEAGDWVIPS---------------------------HVNFGTWRTHALGNDDDFIKLPNPAQSKANG  134 (175)
T ss_dssp             EEEEEECTTCCSCCTTCEEEES---------------------------SSCCCCSBSEEEEEGGGEEEECCHHHHHHTT
T ss_pred             cccccccccccccccccceecc---------------------------ccccccccceeeehhhhccCCCccchhhhhc
Confidence            9999999999999999999863                           2346899999999999999999988755555


Q ss_pred             ccchhHHHHHHHH--hcCCCCCCEEEEEC-C-CHHHHHHHHH
Q 018075          160 MCEPLSVGVHACR--RANVGPETNVMIMG-S-GPIGLVTLLA  197 (361)
Q Consensus       160 ~~~~~~~a~~~l~--~~~~~~g~~vlI~G-~-g~~G~~ai~l  197 (361)
                      .+ ...+||+++.  ..++++|++|||.| + |++|+++||+
T Consensus       135 ~~-~~~ta~~~l~~~~~~~~~g~~vli~gaa~~gvG~~~iQ~  175 (175)
T d1gu7a1         135 KP-NGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY  175 (175)
T ss_dssp             CS-CCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             cc-hHHHHHHHHHHHhcCCCCCCEEEEECccchhhhheEEeC
Confidence            44 4456676664  26799999999997 4 7799988763

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.89  E-value=3.1e-23  Score=168.61  Aligned_cols=144  Identities=24%  Similarity=0.407  Sum_probs=118.5

Q ss_pred             CCcccccccc-hhHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeec
Q 018075          153 VSLEEGAMCE-PLSVGVHACRRANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKV  230 (361)
Q Consensus       153 ~~~~~aa~~~-~~~~a~~~l~~~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~  230 (361)
                      +++++||.++ ++.|||+++++++++|||+|||+| +|++|++++|+||.+|+ +|+++++++++.+.++++|+++++++
T Consensus         1 ls~eeAA~l~~~~~TA~~al~~~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~-~vi~~~~~~~~~~~~~~lGa~~~i~~   79 (171)
T d1iz0a2           1 LSPEEAAAFPVSFLTAYLALKRAQARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAATY   79 (171)
T ss_dssp             CCHHHHHTSHHHHHHHHHHHHHTTCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEEG
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccchhhhhhhhccccc-ccccccccccccccccccccceeeeh
Confidence            5788998665 789999999989999999999998 59999999999999999 68888899999999999999999876


Q ss_pred             CCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC-CcceechHhhhcCcEEEEeecC
Q 018075          231 STDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRY  308 (361)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~  308 (361)
                      .    +   ...+++  .+.++|+|||++| + .++.++++|+++|+++.+|...+ ..+++...++.+++++.|++..
T Consensus        80 ~----~---~~~~~~--~~~g~D~v~d~~G-~-~~~~~~~~l~~~G~~v~~G~~~g~~~~~~~~~~~~k~~~i~g~~~~  147 (171)
T d1iz0a2          80 A----E---VPERAK--AWGGLDLVLEVRG-K-EVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLT  147 (171)
T ss_dssp             G----G---HHHHHH--HTTSEEEEEECSC-T-THHHHHTTEEEEEEEEEC-------CCCCTTHHHHTTCEEEECCHH
T ss_pred             h----h---hhhhhh--ccccccccccccc-h-hHHHHHHHHhcCCcEEEEeCCCCCCCCccHHHHHHCCcEEEEEeCc
Confidence            3    2   222232  3678999999988 4 68999999999999999997653 4467778889999999998654

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=5.1e-23  Score=168.99  Aligned_cols=128  Identities=24%  Similarity=0.308  Sum_probs=112.7

Q ss_pred             CCcccccccc-hhHHHHHHHHh-cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEee
Q 018075          153 VSLEEGAMCE-PLSVGVHACRR-ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAK  229 (361)
Q Consensus       153 ~~~~~aa~~~-~~~~a~~~l~~-~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~  229 (361)
                      +|+++||+++ ++.|||+++.+ +++++||+|||+| +|++|++++|+|+..|+ .|+++++++++.++++++|++++++
T Consensus         1 isfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga-~Vi~~~~s~~k~~~~~~lGa~~vi~   79 (179)
T d1qora2           1 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVIN   79 (179)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCC-eEeecccchHHHHHHHhcCCeEEEE
Confidence            5789999664 78899999976 7899999999997 58899999999999999 7999999999999999999999998


Q ss_pred             cCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC
Q 018075          230 VSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT  286 (361)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  286 (361)
                      +..  +++.+.+++++  ++.++|+++|+++++ .++.++++++++|+++.++....
T Consensus        80 ~~~--~d~~~~v~~~t--~g~g~d~v~d~~g~~-~~~~~~~~l~~~G~~v~~g~~~~  131 (179)
T d1qora2          80 YRE--EDLVERLKEIT--GGKKVRVVYDSVGRD-TWERSLDCLQRRGLMVSFGNSSG  131 (179)
T ss_dssp             TTT--SCHHHHHHHHT--TTCCEEEEEECSCGG-GHHHHHHTEEEEEEEEECCCTTC
T ss_pred             CCC--CCHHHHHHHHh--CCCCeEEEEeCccHH-HHHHHHHHHhcCCeeeecccccC
Confidence            644  67888877764  478999999999966 89999999999999999886554

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=2.9e-23  Score=168.55  Aligned_cols=161  Identities=19%  Similarity=0.205  Sum_probs=130.1

Q ss_pred             Ccccccccc-hhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCC
Q 018075          154 SLEEGAMCE-PLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST  232 (361)
Q Consensus       154 ~~~~aa~~~-~~~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~  232 (361)
                      +++.+|.+. ...|+|++++++++++|++|||+|+|++|++++|+||.+|+ .+++++.+++++++++++|++.++++..
T Consensus         5 ~~a~~Apl~Cag~Tay~al~~~~~~~G~~VlI~GaG~vG~~a~qlak~~Ga-~~i~~~~~~~~~~~a~~lGad~~i~~~~   83 (168)
T d1uufa2           5 QLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKALGADEVVNSRN   83 (168)
T ss_dssp             GHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEETTC
T ss_pred             cHHHHHHHHhHHHHHHHHHHHhCCCCCCEEEEeccchHHHHHHHHhhcccc-cchhhccchhHHHHHhccCCcEEEECch
Confidence            455566443 56789999999999999999999999999999999999999 5667889999999999999999988643


Q ss_pred             CccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC-cceechHhhhcCcEEEEeecC-CC
Q 018075          233 DIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE-MTVALTPAAAREVDVIGIFRY-RS  310 (361)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~-~~  310 (361)
                      .  +.  .     ....+++|++||++|++..++.+++.++++|+++.+|..... ..+....++++++++.|++.+ ..
T Consensus        84 ~--~~--~-----~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~l~~k~~~i~Gs~~~~~~  154 (168)
T d1uufa2          84 A--DE--M-----AAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIP  154 (168)
T ss_dssp             H--HH--H-----HTTTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEECCSCCHH
T ss_pred             h--hH--H-----HHhcCCCceeeeeeecchhHHHHHHHHhcCCEEEEeccCCCCcccccHHHHHHCCcEEEEEeecCHH
Confidence            1  11  1     112468999999999887899999999999999999976543 345666788899999999866 77


Q ss_pred             cHHHHHHHHHcCCC
Q 018075          311 TWPLCIEFLRSGKI  324 (361)
Q Consensus       311 ~~~~~~~~l~~g~~  324 (361)
                      +++++++++++++|
T Consensus       155 d~~e~l~l~a~~~I  168 (168)
T d1uufa2         155 ETQEMLDFCAEHGI  168 (168)
T ss_dssp             HHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHcCC
Confidence            89999999988764

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.89  E-value=2.4e-25  Score=179.39  Aligned_cols=148  Identities=18%  Similarity=0.168  Sum_probs=115.7

Q ss_pred             cceEEEEeeC---CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCC
Q 018075           14 QNMAAWLLGI---KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVK   90 (361)
Q Consensus        14 ~~~~~~~~~~---~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~   90 (361)
                      ++++.++.++   .++++++++.|++++|||||||+|+|||++|++...|...  .....|+++|+|++|+|++  +.+.
T Consensus         3 ~~ka~~~~~~g~~~~l~~~~v~~p~l~~~eVLVkV~a~gin~~D~~~~~g~~~--~~~~~~~~~g~e~~G~v~~--~~~~   78 (162)
T d1tt7a1           3 LFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGN--IVREYPLILGIDAAGTVVS--SNDP   78 (162)
T ss_dssp             EEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCT--TCSSCSEECCSEEEEEEEE--CSST
T ss_pred             cEEEEEEEecCCCeEEEEEEcCCCCCCCCEEEEEEEEecccchhhheeeeccc--ccccceeeeeeeccccccc--cccc
Confidence            4555566633   5699999999999999999999999999999998877542  2346789999999999998  4567


Q ss_pred             CCCCCCEEEecCCcCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcccccccc-hhHHHHH
Q 018075           91 SLEVGDRVALEPGISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLEEGAMCE-PLSVGVH  169 (361)
Q Consensus        91 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~~aa~~~-~~~~a~~  169 (361)
                      ++++||+|+..+...                      +....|+|+||+.++++.++++|+++++++||.++ ...+||.
T Consensus        79 ~~~~g~~v~~~~~~~----------------------g~~~~G~~aey~~v~~~~l~~iP~~ls~~~Aa~~~~~~~ta~~  136 (162)
T d1tt7a1          79 RFAEGDEVIATSYEL----------------------GVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVDQLLTIVDRE  136 (162)
T ss_dssp             TCCTTCEEEEESTTB----------------------TTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHSCSTTSEEEE
T ss_pred             ccccceeeEeeeccc----------------------eeccccccceEEEecHHHEEECCCCCCHHHHHHHHHHHHHHHH
Confidence            899999998643210                      12357999999999999999999999999998775 4556766


Q ss_pred             HHHhcCCCCCCEEEEECC
Q 018075          170 ACRRANVGPETNVMIMGS  187 (361)
Q Consensus       170 ~l~~~~~~~g~~vlI~G~  187 (361)
                      ++.......+++|||.|+
T Consensus       137 ~~~~~~~~~~~~Vli~ga  154 (162)
T d1tt7a1         137 VSLEETPGALKDILQNRI  154 (162)
T ss_dssp             ECSTTHHHHHHHTTTTCC
T ss_pred             HHHhcCCCCCCEEEEECC
Confidence            554433445577777763

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.89  E-value=7.3e-22  Score=161.38  Aligned_cols=167  Identities=22%  Similarity=0.301  Sum_probs=135.8

Q ss_pred             Ccccccccc-hhHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecC
Q 018075          154 SLEEGAMCE-PLSVGVHACR-RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS  231 (361)
Q Consensus       154 ~~~~aa~~~-~~~~a~~~l~-~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  231 (361)
                      |+++||++. .+.|+|+++. .+++++||+|+|+|+|++|..++++++..|+..|++++++++|+++++++|+++++++.
T Consensus         2 P~e~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~~   81 (175)
T d1cdoa2           2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPN   81 (175)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGG
T ss_pred             CHHHHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEecCCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcCC
Confidence            567888775 7899999985 58999999999999999999999999999998999999999999999999999999875


Q ss_pred             CCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCE-EEEEccCCCCcceechHhhhcCcEEEEeecC--
Q 018075          232 TDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGK-VCLIGLAKTEMTVALTPAAAREVDVIGIFRY--  308 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~-~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~--  308 (361)
                      ... +..+...+.  +.+.++|++||++|....+..+...+.++|. ++..+........+....+.++.++.|++..  
T Consensus        82 ~~~-~~~~~~~~~--~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~i~Gs~~G~~  158 (175)
T d1cdoa2          82 DHS-EPISQVLSK--MTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGRTWKGSMFGGF  158 (175)
T ss_dssp             GCS-SCHHHHHHH--HHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHTTCEEEECSGGGC
T ss_pred             Ccc-hhHHHHHHh--hccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecCCcccCccHHHHHCCcEEEEEEEeCC
Confidence            432 222333322  3478999999999998888888888877754 4556666666566677778889999998754  


Q ss_pred             --CCcHHHHHHHHHcCC
Q 018075          309 --RSTWPLCIEFLRSGK  323 (361)
Q Consensus       309 --~~~~~~~~~~l~~g~  323 (361)
                        ++++.++++++++||
T Consensus       159 ~~~~d~~~~i~l~~~gK  175 (175)
T d1cdoa2         159 KGKDGVPKMVKAYLDKK  175 (175)
T ss_dssp             CHHHHHHHHHHHHHTTS
T ss_pred             cHHHHHHHHHHHHHcCC
Confidence              567889999999886

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.88  E-value=9.1e-22  Score=160.91  Aligned_cols=167  Identities=22%  Similarity=0.303  Sum_probs=132.6

Q ss_pred             Ccccccccc-hhHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecC
Q 018075          154 SLEEGAMCE-PLSVGVHACR-RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS  231 (361)
Q Consensus       154 ~~~~aa~~~-~~~~a~~~l~-~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  231 (361)
                      |+++||++. .+.|+|+++. .+++++||+|||+|+|++|.+++++++..|+.+|++++.+++|+++++++|+++.+++.
T Consensus         2 Ple~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~GaGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~   81 (176)
T d2jhfa2           2 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECCCCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecC
Confidence            567888775 6799999985 58999999999999999999999999999988999999999999999999999988764


Q ss_pred             CCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEE-EEEccCCCCcce-echHhhhcCcEEEEeecC-
Q 018075          232 TDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKV-CLIGLAKTEMTV-ALTPAAAREVDVIGIFRY-  308 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~-v~~g~~~~~~~~-~~~~~~~~~~~i~~~~~~-  308 (361)
                      +.+....+...   .+.+.++|++||++|.+..++.++..++++|.. +..+........ ....++.+++++.|++.. 
T Consensus        82 ~~~~~~~~~~~---~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~  158 (176)
T d2jhfa2          82 DYKKPIQEVLT---EMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGG  158 (176)
T ss_dssp             GCSSCHHHHHH---HHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGG
T ss_pred             CchhHHHHHHH---HHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCCCcccccccHHHHhCCCEEEEEEEeC
Confidence            43333333332   234679999999999998889999999997544 444444443333 334567789999998753 


Q ss_pred             ---CCcHHHHHHHHHcCC
Q 018075          309 ---RSTWPLCIEFLRSGK  323 (361)
Q Consensus       309 ---~~~~~~~~~~l~~g~  323 (361)
                         ++++.++++++.+||
T Consensus       159 ~~~~~~~~~li~~~~~GK  176 (176)
T d2jhfa2         159 FKSKDSVPKLVADFMAKK  176 (176)
T ss_dssp             CCHHHHHHHHHHHHHTTS
T ss_pred             CCHHHHHHHHHHHHHCcC
Confidence               557888899998886

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.88  E-value=7.5e-22  Score=160.88  Aligned_cols=164  Identities=20%  Similarity=0.284  Sum_probs=130.7

Q ss_pred             Ccccccccc-hhHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecC
Q 018075          154 SLEEGAMCE-PLSVGVHACR-RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVS  231 (361)
Q Consensus       154 ~~~~aa~~~-~~~~a~~~l~-~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~  231 (361)
                      |+++||++. .+.|+|+++. .+++++||+|+|+|+|++|+.++|+++..|+.+|++++.+++|+++++++|+++++++.
T Consensus         3 P~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~~   82 (176)
T d1d1ta2           3 PPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPK   82 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred             CHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECcc
Confidence            578888775 7899999985 58999999999999999999999999999988999999999999999999999999865


Q ss_pred             CCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCC-CEEEEEccCCCCcceech-HhhhcCcEEEEeecC-
Q 018075          232 TDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPG-GKVCLIGLAKTEMTVALT-PAAAREVDVIGIFRY-  308 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~-~~~~~~~~i~~~~~~-  308 (361)
                      +.+ ...+.+.+.  +.+.++|++||++|.+..++..+..+.++ |+++.+|.......+... ...+++.+++|++.. 
T Consensus        83 ~~~-~~~~~~~~~--~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G~  159 (176)
T d1d1ta2          83 DST-KPISEVLSE--MTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRTWKGCVFGG  159 (176)
T ss_dssp             GCS-SCHHHHHHH--HHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGG
T ss_pred             ccc-hHHHHHHHH--hccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccccccCCCHHHHhCCCEEEEEEEeC
Confidence            432 223333333  34789999999999998888888888766 999999977655444443 355678899998754 


Q ss_pred             ---CCcHHHHHHHHH
Q 018075          309 ---RSTWPLCIEFLR  320 (361)
Q Consensus       309 ---~~~~~~~~~~l~  320 (361)
                         ++++.++++++.
T Consensus       160 ~~~~~dip~li~~~~  174 (176)
T d1d1ta2         160 LKSRDDVPKLVTEFL  174 (176)
T ss_dssp             CCHHHHHHHHHHHHT
T ss_pred             CCcHHHHHHHHHHHh
Confidence               455666666543

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.88  E-value=1.1e-21  Score=162.35  Aligned_cols=162  Identities=23%  Similarity=0.338  Sum_probs=130.4

Q ss_pred             ccccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccch
Q 018075          158 GAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDV  237 (361)
Q Consensus       158 aa~~~~~~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~  237 (361)
                      +++..+++|||++++++++++||+|||+|+|++|++++++|+.+|+.+|++++.+++|+++++++|+++++++  ..+++
T Consensus         5 ~~l~d~~~ta~~a~~~a~v~~G~tVlV~GaG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~~--~~~~~   82 (195)
T d1kola2           5 TCLSDILPTGYHGAVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLS--LDTPL   82 (195)
T ss_dssp             GGGGTHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETT--SSSCH
T ss_pred             HhcccHHHHHHHHHHHhCCCCCCEEEEECcCHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEEeC--CCcCH
Confidence            4455689999999999999999999999999999999999999999999999999999999999999998764  33677


Q ss_pred             hHHHHHHHhhcCCCccEEEEccCC---------------hHHHHHHHHhhcCCCEEEEEccCCCCc-------------c
Q 018075          238 DTDVGKIQNAMGSGIDVSFDCVGF---------------DKTMSTALNATRPGGKVCLIGLAKTEM-------------T  289 (361)
Q Consensus       238 ~~~~~~~~~~~~~~~d~vld~~g~---------------~~~~~~~~~~l~~~G~~v~~g~~~~~~-------------~  289 (361)
                      .+.+.+++  .+.++|++||++|.               +..++.+++.++++|+++.+|......             .
T Consensus        83 ~~~i~~~t--~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G~~~~~~~~~~~~~~~~~~~~  160 (195)
T d1kola2          83 HEQIAALL--GEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSLS  160 (195)
T ss_dssp             HHHHHHHH--SSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSHHHHTTCCC
T ss_pred             HHHHHHHh--CCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEeeecCCCcccchhhhhhcCcee
Confidence            77777764  47899999999984               358999999999999999999754322             1


Q ss_pred             eechHhhhcCcEEEEeecC-CCcHHHHHHHHHcCC
Q 018075          290 VALTPAAAREVDVIGIFRY-RSTWPLCIEFLRSGK  323 (361)
Q Consensus       290 ~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~g~  323 (361)
                      ++...++.++.++.+.... ...++++++++.+++
T Consensus       161 ~~~~~~~~k~~~i~~g~~~v~~~~~~Ll~~I~~~k  195 (195)
T d1kola2         161 IRFGLGWAKSHSFHTGQTPVMKYNRALMQAIMWDR  195 (195)
T ss_dssp             CCHHHHHHTTCEEEESSCCHHHHHHHHHHHHHTTS
T ss_pred             eeHHHHHhhcceeccCCCchHHHHHHHHHHHHcCC
Confidence            2233455677777653222 344677888887764

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.87  E-value=4.2e-22  Score=164.34  Aligned_cols=165  Identities=18%  Similarity=0.247  Sum_probs=124.9

Q ss_pred             CCcccccccchhHHHHHHHHh-cCCCCC--CEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhH-HHHHHHcCCCEE
Q 018075          153 VSLEEGAMCEPLSVGVHACRR-ANVGPE--TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQR-LSIARNLGADET  227 (361)
Q Consensus       153 ~~~~~aa~~~~~~~a~~~l~~-~~~~~g--~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~-~~~~~~lg~~~~  227 (361)
                      +|+.+.|+-.+..|||++++. .++++|  ++|||+| +|++|++++|+||.+|+++|++++.++++ .++++++|++.+
T Consensus         2 ~~~~~galg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~v   81 (187)
T d1vj1a2           2 LSYFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAA   81 (187)
T ss_dssp             GGGGGTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSEE
T ss_pred             ccHHHHHhhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceEE
Confidence            567776766689999999965 789987  8899998 69999999999999999888877666654 556678999999


Q ss_pred             eecCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCCC---c--cee-----chHhhh
Q 018075          228 AKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKTE---M--TVA-----LTPAAA  297 (361)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~---~--~~~-----~~~~~~  297 (361)
                      +++..  +++.+.++++   .+.|+|+|||++|++ .++.++++|+++|+++.+|..+..   .  ..+     ...+..
T Consensus        82 i~~~~--~~~~~~~~~~---~~~GvDvv~D~vGg~-~~~~~~~~l~~~G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~~  155 (187)
T d1vj1a2          82 VNYKT--GNVAEQLREA---CPGGVDVYFDNVGGD-ISNTVISQMNENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKE  155 (187)
T ss_dssp             EETTS--SCHHHHHHHH---CTTCEEEEEESSCHH-HHHHHHTTEEEEEEEEEC------------CCCCCHHHHHHHHH
T ss_pred             eeccc--hhHHHHHHHH---hccCceEEEecCCch-hHHHHhhhccccccEEEeccccccccccccCCchHHHHHHHHHh
Confidence            99754  5677776665   367899999999965 899999999999999999854321   1  111     112456


Q ss_pred             cCcEEEEeecC------CCcHHHHHHHHHcCC
Q 018075          298 REVDVIGIFRY------RSTWPLCIEFLRSGK  323 (361)
Q Consensus       298 ~~~~i~~~~~~------~~~~~~~~~~l~~g~  323 (361)
                      +++++.++...      .+.++++.+++++|+
T Consensus       156 k~i~~~g~~~~~~~~~~~e~~~~l~~~i~~Gk  187 (187)
T d1vj1a2         156 RNITRERFTVLNYKDKFEPGILQLSQWFKEGK  187 (187)
T ss_dssp             TTCEEEECCGGGCGGGHHHHHHHHHHHHHHTS
T ss_pred             cceEEEEeEecchHHHHHHHHHHHHHHHHCcC
Confidence            88888886532      344677788888875

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.81  E-value=6.6e-20  Score=147.32  Aligned_cols=146  Identities=19%  Similarity=0.262  Sum_probs=114.5

Q ss_pred             HHHHHHh-cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHH
Q 018075          167 GVHACRR-ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI  244 (361)
Q Consensus       167 a~~~l~~-~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~  244 (361)
                      +++++.+ ...+++++|||+| +|++|.+++|+||.+|+ +|+++.++++|.++++++|++.++++.+   ...+.   +
T Consensus        11 a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~~~~lGad~vi~~~~---~~~~~---~   83 (167)
T d1tt7a2          11 SVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQLGASEVISRED---VYDGT---L   83 (167)
T ss_dssp             HHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHHTCSEEEEHHH---HCSSC---C
T ss_pred             HHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCC-ceEEEecCHHHHHHHHhhcccceEeccc---hhchh---h
Confidence            3355544 5566788999998 69999999999999999 6888989999999999999999887532   11111   2


Q ss_pred             HhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC-CcceechHhhhcCcEEEEeecCC---CcHHHHHHHHH
Q 018075          245 QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGIFRYR---STWPLCIEFLR  320 (361)
Q Consensus       245 ~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~l~  320 (361)
                      ....+.++|+|||++|++ .++.++++|+++|+++.+|...+ ..+++...++.++++++|.....   +....+++.+.
T Consensus        84 ~~~~~~gvd~vid~vgg~-~~~~~~~~l~~~G~iv~~G~~~g~~~~~~~~~l~~k~~~i~G~~~~~~~~~~~~~~~~~l~  162 (167)
T d1tt7a2          84 KALSKQQWQGAVDPVGGK-QLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDSVYCPMDVRAAVWERMS  162 (167)
T ss_dssp             CSSCCCCEEEEEESCCTH-HHHHHHTTEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEECCSSSCCHHHHHHHHHHTT
T ss_pred             hcccCCCceEEEecCcHH-HHHHHHHHhccCceEEEeeccCCCcccCCHHHHHHCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence            223568899999999977 99999999999999999996654 56778889999999999976542   23344555543

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.81  E-value=2.6e-20  Score=151.21  Aligned_cols=146  Identities=16%  Similarity=0.206  Sum_probs=117.0

Q ss_pred             CCcccccccc-hhHHHHHHH---HhcC-CCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCE
Q 018075          153 VSLEEGAMCE-PLSVGVHAC---RRAN-VGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE  226 (361)
Q Consensus       153 ~~~~~aa~~~-~~~~a~~~l---~~~~-~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~  226 (361)
                      +|+.+||.++ +..|||+++   .... ..++++|||+| +|++|++++|+||.+|+ +|+++++++++.+.++++|+++
T Consensus         1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga-~Via~~~~~~k~~~~~~lGad~   79 (177)
T d1o89a2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSLGASR   79 (177)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTEEE
T ss_pred             CCHHHHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCC-CeEEEecchhHHHHHHhhcccc
Confidence            4678888664 677888765   3433 44567999998 69999999999999999 5888889999999999999999


Q ss_pred             EeecCCCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC-CcceechHhhhcCcEEEEe
Q 018075          227 TAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT-EMTVALTPAAAREVDVIGI  305 (361)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~  305 (361)
                      +++++.  .++.+.   +   .....|.++|++|++ .+...+++|+++|+++.+|...+ ..+.+...++.+++++.|+
T Consensus        80 vi~~~~--~~~~~~---l---~~~~~~~vvD~Vgg~-~~~~~l~~l~~~Griv~~G~~~~~~~~~~~~~~~~k~~~i~G~  150 (177)
T d1o89a2          80 VLPRDE--FAESRP---L---EKQVWAGAIDTVGDK-VLAKVLAQMNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQGV  150 (177)
T ss_dssp             EEEGGG--SSSCCS---S---CCCCEEEEEESSCHH-HHHHHHHTEEEEEEEEECCCTTCSCCCCCSHHHHHHCCEEEEC
T ss_pred             cccccc--HHHHHH---H---HhhcCCeeEEEcchH-HHHHHHHHhccccceEeecccCCccccccHHHHHHCCCeEEEE
Confidence            998753  222222   1   245689999999976 99999999999999999996543 5567778899999999997


Q ss_pred             ecC
Q 018075          306 FRY  308 (361)
Q Consensus       306 ~~~  308 (361)
                      ...
T Consensus       151 ~~~  153 (177)
T d1o89a2         151 DSV  153 (177)
T ss_dssp             CSS
T ss_pred             ecc
Confidence            543

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.64  E-value=4.9e-15  Score=115.39  Aligned_cols=120  Identities=14%  Similarity=0.040  Sum_probs=90.0

Q ss_pred             CceEEEEecCCCCCCCcEEEEEeeeecCcchhhhhcccccccccCCCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCC
Q 018075           24 KTLKIQPYHLPTLGPQDVKVRIKALGICGSDVHHFKTMRCANFIVKKPMVIGHECAGIIEEVGSEVKSLEVGDRVALEPG  103 (361)
Q Consensus        24 ~~l~~~~~~~p~~~~~eVlV~v~~~~l~~~D~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~  103 (361)
                      +.|++++.++|+|++||||||+++.++++.......       +.+..-++..+++|+|++  ++.++|++||+|..   
T Consensus        20 ~~f~l~e~~ip~~~~gevLvk~~~~svDp~~R~~~~-------~~~~g~~~~g~~vg~Vv~--S~~~~f~~GD~V~g---   87 (147)
T d1v3va1          20 SDFELKTVELPPLKNGEVLLEALFLSVDPYMRIASK-------RLKEGAVMMGQQVARVVE--SKNSAFPAGSIVLA---   87 (147)
T ss_dssp             GGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHGG-------GSCTTSBCCCCEEEEEEE--ESCTTSCTTCEEEE---
T ss_pred             cceEEEEEECCCCCCCEEEEEEEEEeEccccccccc-------ccccCCccccceEEEEEE--eCCCcccCCCEEEE---
Confidence            459999999999999999999999999987654322       123344566788999988  66788999999985   


Q ss_pred             cCCCCCccccCCCCCCCCCccccCCCCCCCceeEEEEecCCceEECCCCCCcc-----ccccc-chhHH-HHHHHHhcCC
Q 018075          104 ISCGHCSLCKAGSYNLCPEMRFFGSPPTNGSLAHKVVHPAKLCYKLPDNVSLE-----EGAMC-EPLSV-GVHACRRANV  176 (361)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~vP~~~~~~-----~aa~~-~~~~~-a~~~l~~~~~  176 (361)
                                                  .++|+||.+.+...+.++|++.+..     ..+.+ .+..+ ||..+. ...
T Consensus        88 ----------------------------~~gw~ey~v~~~~~l~kv~~~~~~~~~~~~~~~~lG~~Gmtaay~gl~-~~~  138 (147)
T d1v3va1          88 ----------------------------QSGWTTHFISDGKGLEKLLTEWPDKKIQYHEHVTKGFENMPAAFIEML-NGA  138 (147)
T ss_dssp             ----------------------------CCCSBSEEEECSSSCEECCTTCCTTSSCCCEEEEECGGGHHHHHHHHH-TTC
T ss_pred             ----------------------------ccCCEeEEEeccceeeEccccccccccchhhhHhccccchHHHHHHhh-CCC
Confidence                                        4789999999999999999775432     22222 34444 554553 335


Q ss_pred             CCCCEEEE
Q 018075          177 GPETNVMI  184 (361)
Q Consensus       177 ~~g~~vlI  184 (361)
                      +.|++||+
T Consensus       139 k~Getvv~  146 (147)
T d1v3va1         139 NLGKAVVT  146 (147)
T ss_dssp             CSSEEEEE
T ss_pred             CCCCEEEe
Confidence            78999987

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.36  E-value=4e-13  Score=91.43  Aligned_cols=71  Identities=11%  Similarity=0.192  Sum_probs=60.6

Q ss_pred             CCcccccccc-hhHHHHHHHH----hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCC
Q 018075          153 VSLEEGAMCE-PLSVGVHACR----RANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA  224 (361)
Q Consensus       153 ~~~~~aa~~~-~~~~a~~~l~----~~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~  224 (361)
                      +|+++|+.+. ...|||.++.    ....+++++|||+| +|++|.+++|++|.+|+ .|+++++++++.++++++|+
T Consensus         1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~-~Vi~~t~s~~k~~~~~~lGA   77 (77)
T d1o8ca2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSLGA   77 (77)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCC-eEEEEECCHHHHHHHHHCCC
Confidence            4778888775 6778877652    36678999999997 69999999999999999 58888899999999999985

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=98.28  E-value=7.1e-07  Score=73.02  Aligned_cols=104  Identities=16%  Similarity=0.193  Sum_probs=76.5

Q ss_pred             HHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHH----HHHHHcCCCEEeecCCCccchhHHHHH
Q 018075          168 VHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRL----SIARNLGADETAKVSTDIEDVDTDVGK  243 (361)
Q Consensus       168 ~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~----~~~~~lg~~~~~~~~~~~~~~~~~~~~  243 (361)
                      ...++.+++++|++||.+|+|. |+.++-+++..|. .|++++.+++-.    +.++++|.+.+.....   +.....  
T Consensus        68 a~ml~~L~l~~g~~VLeIGsGs-GY~taila~l~g~-~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~g---d~~~g~--  140 (215)
T d1jg1a_          68 AIMLEIANLKPGMNILEVGTGS-GWNAALISEIVKT-DVYTIERIPELVEFAKRNLERAGVKNVHVILG---DGSKGF--  140 (215)
T ss_dssp             HHHHHHHTCCTTCCEEEECCTT-SHHHHHHHHHHCS-CEEEEESCHHHHHHHHHHHHHTTCCSEEEEES---CGGGCC--
T ss_pred             HHHHHhhccCccceEEEecCCC-ChhHHHHHHhhCc-eeEEEeccHHHHHHHHHHHHHcCCceeEEEEC---ccccCC--
Confidence            3456778899999999999887 8888899998886 589999987644    4445578766544332   221111  


Q ss_pred             HHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEE
Q 018075          244 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       244 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~  281 (361)
                         ....+||.++-+.+.+...+.+++.|++||+++..
T Consensus       141 ---~~~~pfD~Iiv~~a~~~ip~~l~~qL~~gGrLv~p  175 (215)
T d1jg1a_         141 ---PPKAPYDVIIVTAGAPKIPEPLIEQLKIGGKLIIP  175 (215)
T ss_dssp             ---GGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             ---cccCcceeEEeecccccCCHHHHHhcCCCCEEEEE
Confidence               12467999998777665678899999999999974

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=98.20  E-value=2.4e-06  Score=65.97  Aligned_cols=98  Identities=19%  Similarity=0.299  Sum_probs=73.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      +..+|+|+|+|..|+.|+..|+.+|+ .|.+.|.+.++.+.++......+.....+..    .+.+..    ...|+||.
T Consensus        31 ~pa~V~ViGaGvaG~~A~~~A~~lGA-~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~----~l~~~~----~~aDivI~  101 (168)
T d1pjca1          31 KPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSNSA----EIETAV----AEADLLIG  101 (168)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECCHH----HHHHHH----HTCSEEEE
T ss_pred             CCcEEEEECCChHHHHHHHHHhhCCC-EEEEEeCcHHHHHHHHHhhcccceeehhhhh----hHHHhh----ccCcEEEE
Confidence            56899999999999999999999999 7999999999998888765332211112212    222221    36899999


Q ss_pred             ccCChH------HHHHHHHhhcCCCEEEEEccC
Q 018075          258 CVGFDK------TMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       258 ~~g~~~------~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      ++-.+.      ..++.++.|+||..+|.+...
T Consensus       102 aalipG~~aP~lIt~~mv~~Mk~GSVIVDvaid  134 (168)
T d1pjca1         102 AVLVPGRRAPILVPASLVEQMRTGSVIVDVAVD  134 (168)
T ss_dssp             CCCCTTSSCCCCBCHHHHTTSCTTCEEEETTCT
T ss_pred             eeecCCcccCeeecHHHHhhcCCCcEEEEeecC
Confidence            885442      467899999999999998744

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.18  E-value=2.4e-06  Score=69.98  Aligned_cols=104  Identities=23%  Similarity=0.282  Sum_probs=74.3

Q ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHH
Q 018075          169 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGK  243 (361)
Q Consensus       169 ~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~  243 (361)
                      ..++.+++++|++||-+|||. |..++.+++..|. ..|++++.+++..+.+++    .+...+.....   +..+..  
T Consensus        66 ~~l~~l~l~~g~~VLdiG~Gt-G~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~---d~~~~~--  139 (213)
T d1dl5a1          66 LFMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCG---DGYYGV--  139 (213)
T ss_dssp             HHHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES---CGGGCC--
T ss_pred             HHHHhhhccccceEEEecCcc-chhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccC---chHHcc--
Confidence            356778899999999999887 8888999998863 369999999987766655    34443332211   111111  


Q ss_pred             HHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEE
Q 018075          244 IQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       244 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~  281 (361)
                         .....||+|+.+.+.....+.+++.|+|||+++..
T Consensus       140 ---~~~~~fD~I~~~~~~~~~p~~l~~~LkpGG~lv~p  174 (213)
T d1dl5a1         140 ---PEFSPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP  174 (213)
T ss_dssp             ---GGGCCEEEEEECSBBSCCCHHHHHHEEEEEEEEEE
T ss_pred             ---ccccchhhhhhhccHHHhHHHHHHhcCCCcEEEEE
Confidence               01357999999776654557789999999999874

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=98.14  E-value=6e-06  Score=64.64  Aligned_cols=102  Identities=19%  Similarity=0.284  Sum_probs=75.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCc------------------cchhH
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDI------------------EDVDT  239 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~------------------~~~~~  239 (361)
                      +..+|+|+|+|.+|+.|+..|+.+|+ .|.+.|.+.++++.+++++...+.......                  ....+
T Consensus        28 ~pa~VvViGaGvaG~~Aa~~A~~lGA-~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~  106 (183)
T d1l7da1          28 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  106 (183)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCcEEEEEcCcHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence            46799999999999999999999999 799999999999999999876542110000                  01111


Q ss_pred             HHHHHHhhcCCCccEEEEccCChH------HHHHHHHhhcCCCEEEEEccC
Q 018075          240 DVGKIQNAMGSGIDVSFDCVGFDK------TMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       240 ~~~~~~~~~~~~~d~vld~~g~~~------~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      .+.+.    -...|+||.++-.+.      ..++.++.|+||+.+|.+...
T Consensus       107 ~l~~~----l~~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDvaid  153 (183)
T d1l7da1         107 AVLKE----LVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVE  153 (183)
T ss_dssp             HHHHH----HTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGG
T ss_pred             HHHHH----HHhhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEeec
Confidence            12111    246999999875442      567899999999999998743

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=97.97  E-value=3.5e-06  Score=69.24  Aligned_cols=102  Identities=14%  Similarity=0.164  Sum_probs=72.4

Q ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCC--CEEeecCCCccchhHHHHHHHh
Q 018075          169 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA--DETAKVSTDIEDVDTDVGKIQN  246 (361)
Q Consensus       169 ~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~--~~~~~~~~~~~~~~~~~~~~~~  246 (361)
                      ..++..++++|++||-+|+|. |+.++.+++.. . .|++++.+++..+.+++.-.  ..+....   .+......    
T Consensus        61 ~ml~~L~l~~g~~VLdIG~Gs-Gy~ta~La~l~-~-~V~aiE~~~~~~~~A~~~~~~~~nv~~~~---~d~~~g~~----  130 (224)
T d1vbfa_          61 FMLDELDLHKGQKVLEIGTGI-GYYTALIAEIV-D-KVVSVEINEKMYNYASKLLSYYNNIKLIL---GDGTLGYE----  130 (224)
T ss_dssp             HHHHHTTCCTTCEEEEECCTT-SHHHHHHHHHS-S-EEEEEESCHHHHHHHHHHHTTCSSEEEEE---SCGGGCCG----
T ss_pred             HHHHHhhhcccceEEEecCCC-CHHHHHHHHHh-c-ccccccccHHHHHHHHHHHhccccccccc---Cchhhcch----
Confidence            356778999999999999885 78888888864 4 69999999998888877422  2211111   12111111    


Q ss_pred             hcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEE
Q 018075          247 AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       247 ~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~  281 (361)
                       ...+||.|+-+.+.+...+.+++.|++||+++..
T Consensus       131 -~~~pfD~Iiv~~a~~~ip~~l~~qLk~GGrLV~p  164 (224)
T d1vbfa_         131 -EEKPYDRVVVWATAPTLLCKPYEQLKEGGIMILP  164 (224)
T ss_dssp             -GGCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             -hhhhHHHHHhhcchhhhhHHHHHhcCCCCEEEEE
Confidence             1357999998766665677789999999999985

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=1.3e-05  Score=66.02  Aligned_cols=104  Identities=19%  Similarity=0.175  Sum_probs=71.6

Q ss_pred             HHHHhc--CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHHH----cCC-----CEEeecCCCccc
Q 018075          169 HACRRA--NVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGA-----DETAKVSTDIED  236 (361)
Q Consensus       169 ~~l~~~--~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~-----~~~~~~~~~~~~  236 (361)
                      ..++..  .++||++||-+|+|. |+.++.+|+..| ...|++++.+++-.+.+++    .+.     ..+....   .+
T Consensus        65 ~~le~L~~~l~~g~~VLdiG~Gs-Gy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~---gD  140 (224)
T d1i1na_          65 YALELLFDQLHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVV---GD  140 (224)
T ss_dssp             HHHHHTTTTSCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEE---SC
T ss_pred             HHHHHHhhccCCCCeEEEecCCC-CHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEE---ee
Confidence            455543  789999999999987 888899999876 3379999999987666543    222     1111110   11


Q ss_pred             hhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEE
Q 018075          237 VDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       237 ~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~  281 (361)
                      .....     .....||.|+.+.......+.+++.|+|||+++..
T Consensus       141 ~~~~~-----~~~~~fD~I~~~~~~~~ip~~l~~~LkpGG~LV~p  180 (224)
T d1i1na_         141 GRMGY-----AEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILP  180 (224)
T ss_dssp             GGGCC-----GGGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             ccccc-----chhhhhhhhhhhcchhhcCHHHHhhcCCCcEEEEE
Confidence            11111     01357999998777665678899999999999984

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=97.90  E-value=1.4e-05  Score=66.69  Aligned_cols=103  Identities=13%  Similarity=0.175  Sum_probs=71.3

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEeCChhHHHHHHH----cC-CCEEeecCCCccchhHHHHHH
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARN----LG-ADETAKVSTDIEDVDTDVGKI  244 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----lg-~~~~~~~~~~~~~~~~~~~~~  244 (361)
                      +.+++++||++||-.|+|+ |.+++.+|+..|. .+|++++.+++..+.+++    ++ ...+....   .++.+..   
T Consensus        78 i~~l~i~pG~rVLEiG~Gs-G~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~---~Di~~~~---  150 (250)
T d1yb2a1          78 IMRCGLRPGMDILEVGVGS-GNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSR---SDIADFI---  150 (250)
T ss_dssp             ---CCCCTTCEEEEECCTT-SHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEEC---SCTTTCC---
T ss_pred             HHHcCCCCcCEEEEeeeeC-cHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEE---eeeeccc---
Confidence            5668999999999999877 7788889988753 379999999998887765    22 23322221   2222211   


Q ss_pred             HhhcCCCccEEEEccCCh-HHHHHHHHhhcCCCEEEEEcc
Q 018075          245 QNAMGSGIDVSFDCVGFD-KTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       245 ~~~~~~~~d~vld~~g~~-~~~~~~~~~l~~~G~~v~~g~  283 (361)
                         ....||.|+-....+ ..++.+.+.|+|||+++++..
T Consensus       151 ---~~~~fD~V~ld~p~p~~~l~~~~~~LKpGG~lv~~~P  187 (250)
T d1yb2a1         151 ---SDQMYDAVIADIPDPWNHVQKIASMMKPGSVATFYLP  187 (250)
T ss_dssp             ---CSCCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEES
T ss_pred             ---ccceeeeeeecCCchHHHHHHHHHhcCCCceEEEEeC
Confidence               245799887544433 578999999999999998643

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=97.85  E-value=0.00012  Score=60.93  Aligned_cols=105  Identities=18%  Similarity=0.203  Sum_probs=75.4

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEE-eecCCCccchhHHHHHHHhhcCCCccE
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADET-AKVSTDIEDVDTDVGKIQNAMGSGIDV  254 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~  254 (361)
                      -+|+++||.| ++++|.+.++.+...|+ .|+.+++++++.+.+++++...+ .|+ .+..+..+.+.++.+.. +++|+
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~~-G~iDi   79 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGGAFFQVDL-EDERERVRFVEEAAYAL-GRVDV   79 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTCEEEECCT-TCHHHHHHHHHHHHHHH-SCCCE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeEEEEeC-CCHHHHHHHHHHHHHhc-CCCCe
Confidence            4789999998 58999999999999999 68889999999999988886543 222 33344455555554432 47999


Q ss_pred             EEEccCCh-------------------------HHHHHHHHhhc--CCCEEEEEccC
Q 018075          255 SFDCVGFD-------------------------KTMSTALNATR--PGGKVCLIGLA  284 (361)
Q Consensus       255 vld~~g~~-------------------------~~~~~~~~~l~--~~G~~v~~g~~  284 (361)
                      ++++.|..                         ...+.+++.|.  .+|+++.++..
T Consensus        80 LVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~  136 (248)
T d2d1ya1          80 LVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASV  136 (248)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCG
T ss_pred             EEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccc
Confidence            99988753                         13444555664  46899988744

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.80  E-value=1.1e-05  Score=66.24  Aligned_cols=104  Identities=15%  Similarity=0.169  Sum_probs=67.9

Q ss_pred             HHHHhc--CCCCCCEEEEECCCHHHHHHHHHHHHcC---C---CEEEEEeCChhHHHHHHHc---------CCCEEeecC
Q 018075          169 HACRRA--NVGPETNVMIMGSGPIGLVTLLAARAFG---A---PRIIITDVDVQRLSIARNL---------GADETAKVS  231 (361)
Q Consensus       169 ~~l~~~--~~~~g~~vlI~G~g~~G~~ai~la~~~g---~---~~vv~v~~~~~~~~~~~~l---------g~~~~~~~~  231 (361)
                      ..++..  ++++|++||.+|+|. |+.++.+++..|   .   .+|++++.+++-.+.+++.         +...+....
T Consensus        69 ~~l~~L~~~l~~g~~VLeIGtGs-GY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~  147 (223)
T d1r18a_          69 FALEYLRDHLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVE  147 (223)
T ss_dssp             HHHHHTTTTCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred             HHHHHHhhccCCCCeEEEecCCC-CHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEe
Confidence            345543  799999999999765 666666666553   2   2699999998766655431         222222211


Q ss_pred             CCccchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEE
Q 018075          232 TDIEDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~  281 (361)
                      .   +......     ...+||.|+-+.+.+...+.+.+.|++||+++..
T Consensus       148 ~---d~~~~~~-----~~~~fD~Iiv~~a~~~~p~~l~~~Lk~gG~lV~p  189 (223)
T d1r18a_         148 G---DGRKGYP-----PNAPYNAIHVGAAAPDTPTELINQLASGGRLIVP  189 (223)
T ss_dssp             S---CGGGCCG-----GGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEE
T ss_pred             c---ccccccc-----cccceeeEEEEeechhchHHHHHhcCCCcEEEEE
Confidence            1   2111111     1357999988777665678889999999999874

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=97.70  E-value=8.3e-05  Score=62.55  Aligned_cols=107  Identities=17%  Similarity=0.232  Sum_probs=75.4

Q ss_pred             HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHH
Q 018075          167 GVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDV  241 (361)
Q Consensus       167 a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~  241 (361)
                      +.+.+..++++||++||=.|+|+ |..++.+|+..|. ..|++++.+++..+.+++    ++....+....  .+.... 
T Consensus        92 ~~~Ii~~l~i~pG~~VLDiG~Gs-G~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~--~d~~~~-  167 (266)
T d1o54a_          92 SSFIAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKV--RDISEG-  167 (266)
T ss_dssp             HHHHHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEEC--CCGGGC-
T ss_pred             HHHHHHhhCCCCCCEEEECCCCC-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEe--cccccc-
Confidence            33456778999999999999887 8888899998863 279999999998777655    45422111111  122111 


Q ss_pred             HHHHhhcCCCccEEEEccCCh-HHHHHHHHhhcCCCEEEEEc
Q 018075          242 GKIQNAMGSGIDVSFDCVGFD-KTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       242 ~~~~~~~~~~~d~vld~~g~~-~~~~~~~~~l~~~G~~v~~g  282 (361)
                           .....+|.|+-....+ ..++.+.+.|+|||+++.+.
T Consensus       168 -----~~~~~~D~V~~d~p~p~~~l~~~~~~LKpGG~lv~~~  204 (266)
T d1o54a_         168 -----FDEKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVC  204 (266)
T ss_dssp             -----CSCCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred             -----ccccceeeeEecCCCHHHHHHHHHhhcCCCCEEEEEe
Confidence                 1245688887766655 57899999999999999764

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.69  E-value=9.4e-05  Score=61.94  Aligned_cols=104  Identities=19%  Similarity=0.246  Sum_probs=73.2

Q ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEeCChhHHHHHHH----c-C--CCEEeecCCCccchhHHH
Q 018075          170 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARN----L-G--ADETAKVSTDIEDVDTDV  241 (361)
Q Consensus       170 ~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~----l-g--~~~~~~~~~~~~~~~~~~  241 (361)
                      .+..++++||++||=.|+|+ |.+++.+|+..|- -+|++++.+++..+.+++    + +  .+.+.....   +..+. 
T Consensus        88 Ii~~l~i~PG~~VLE~G~Gs-G~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~---d~~~~-  162 (264)
T d1i9ga_          88 IVHEGDIFPGARVLEAGAGS-GALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVS---DLADS-  162 (264)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECS---CGGGC-
T ss_pred             HHHHhCCCCCCEEEecCcCC-cHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEec---ccccc-
Confidence            45678999999999999887 8889999999863 279999999998888765    1 1  222211111   21110 


Q ss_pred             HHHHhhcCCCccEEEEccCCh-HHHHHHHHhhcCCCEEEEEc
Q 018075          242 GKIQNAMGSGIDVSFDCVGFD-KTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       242 ~~~~~~~~~~~d~vld~~g~~-~~~~~~~~~l~~~G~~v~~g  282 (361)
                          ......||.||-....+ ..+..+.+.|+|||+++.+.
T Consensus       163 ----~~~~~~fDaV~ldlp~P~~~l~~~~~~LkpGG~lv~~~  200 (264)
T d1i9ga_         163 ----ELPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYV  200 (264)
T ss_dssp             ----CCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             ----cccCCCcceEEEecCCHHHHHHHHHhccCCCCEEEEEe
Confidence                01246799776545443 57888999999999998864

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.66  E-value=0.00012  Score=56.94  Aligned_cols=75  Identities=13%  Similarity=0.175  Sum_probs=57.3

Q ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcCCCEEeecCCCccchhHHHHHHHhh
Q 018075          169 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADETAKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       169 ~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~~~  247 (361)
                      .+++..++.++.+|||+|+|+.+.+++.-++..|+..+..+.++.++.+.+ +.++...+...                 
T Consensus         7 ~~l~~~~~~~~~~vlIlGaGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~~~~-----------------   69 (167)
T d1npya1           7 KLIEKYHLNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYINSL-----------------   69 (167)
T ss_dssp             HHHHHTTCCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEESCC-----------------
T ss_pred             HHHHHcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhhhcc-----------------
Confidence            456667777899999999999999999999999987888888998876654 44665432111                 


Q ss_pred             cCCCccEEEEccC
Q 018075          248 MGSGIDVSFDCVG  260 (361)
Q Consensus       248 ~~~~~d~vld~~g  260 (361)
                      ....+|++++|+.
T Consensus        70 ~~~~~DliINaTp   82 (167)
T d1npya1          70 ENQQADILVNVTS   82 (167)
T ss_dssp             TTCCCSEEEECSS
T ss_pred             cccchhhheeccc
Confidence            1246899999876

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.63  E-value=0.00025  Score=60.35  Aligned_cols=100  Identities=14%  Similarity=0.190  Sum_probs=69.3

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH----HHcCCCEEeecCCCccchhHHHHHHHh
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADETAKVSTDIEDVDTDVGKIQN  246 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~~~~~~~  246 (361)
                      ++++++++|++||=+|||- |-.++.+|+..|+ .|++++.+++..+.+    ++.|....+....  .+..        
T Consensus        54 ~~~l~l~~G~~VLDiGCG~-G~~~~~~a~~~g~-~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~--~d~~--------  121 (291)
T d1kpia_          54 LDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRI--QGWE--------  121 (291)
T ss_dssp             HHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHSCCSSCEEEEE--CCGG--------
T ss_pred             HHhcCCCCCCEEEEecCcc-hHHHHHHHHhcCc-ceeeccchHHHHHHHHHHHHhhccchhhhhhh--hccc--------
Confidence            4678999999999999875 4567889999999 789999999865444    4456443222111  1211        


Q ss_pred             hcCCCccEEEE-----ccCC----------hHHHHHHHHhhcCCCEEEEEc
Q 018075          247 AMGSGIDVSFD-----CVGF----------DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       247 ~~~~~~d~vld-----~~g~----------~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      .....||.|+.     .++.          +..++.+.+.|+|||++++-.
T Consensus       122 ~~~~~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~LkpgG~~~l~~  172 (291)
T d1kpia_         122 EFDEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT  172 (291)
T ss_dssp             GCCCCCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred             ccccccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCCCceEEEE
Confidence            12467998865     4443          246888999999999998643

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.63  E-value=0.00094  Score=51.23  Aligned_cols=76  Identities=16%  Similarity=0.345  Sum_probs=56.7

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHH-HHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCc
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRL-SIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~-~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      ..--.+.++||+|+|.+|..+++.+...|+..+..+.++.++. +++++++... ..+    .++.+.   +     ..+
T Consensus        19 ~~~l~~~~ilviGaG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~~-~~~----~~~~~~---l-----~~~   85 (159)
T d1gpja2          19 LGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGEA-VRF----DELVDH---L-----ARS   85 (159)
T ss_dssp             HSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCEE-CCG----GGHHHH---H-----HTC
T ss_pred             hCCcccCeEEEECCCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhccc-ccc----hhHHHH---h-----ccC
Confidence            3345789999999999999999999999997788888887665 5778888543 222    122222   2     369


Q ss_pred             cEEEEccCCh
Q 018075          253 DVSFDCVGFD  262 (361)
Q Consensus       253 d~vld~~g~~  262 (361)
                      |+||.|++.+
T Consensus        86 Divi~atss~   95 (159)
T d1gpja2          86 DVVVSATAAP   95 (159)
T ss_dssp             SEEEECCSSS
T ss_pred             CEEEEecCCC
Confidence            9999999865

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=97.55  E-value=7.6e-05  Score=62.30  Aligned_cols=125  Identities=18%  Similarity=0.298  Sum_probs=75.4

Q ss_pred             CceEECCCCCCcccccccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH--
Q 018075          144 KLCYKLPDNVSLEEGAMCEPLSVGVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN--  221 (361)
Q Consensus       144 ~~~~~vP~~~~~~~aa~~~~~~~a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~--  221 (361)
                      ...+.+.+++++-...-. +.......+.. ..++|++||=+|||. |..++.+++ .|+ +|+++|.+++..+.+++  
T Consensus        88 ~~~i~i~pg~aFGTG~H~-TT~l~l~~l~~-~~~~g~~VLDiGcGs-G~l~i~aa~-~g~-~V~gvDis~~av~~A~~na  162 (254)
T d2nxca1          88 EIPLVIEPGMAFGTGHHE-TTRLALKALAR-HLRPGDKVLDLGTGS-GVLAIAAEK-LGG-KALGVDIDPMVLPQAEANA  162 (254)
T ss_dssp             SEEEECCCC-----CCSH-HHHHHHHHHHH-HCCTTCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCGGGHHHHHHHH
T ss_pred             ceEEEEccccccCccccc-hhhHHHHHHHh-hcCccCEEEEcccch-hHHHHHHHh-cCC-EEEEEECChHHHHHHHHHH
Confidence            456777777766444311 11122333333 358999999999876 777776665 687 69999999988777664  


Q ss_pred             --cCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccCCh---HHHHHHHHhhcCCCEEEEEcc
Q 018075          222 --LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD---KTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       222 --lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~~g~  283 (361)
                        .+....+. .   .+....   +   ....||+|+......   ..++.+.+.|+|||++++.|.
T Consensus       163 ~~n~~~~~~~-~---~d~~~~---~---~~~~fD~V~ani~~~~l~~l~~~~~~~LkpGG~lilSgi  219 (254)
T d2nxca1         163 KRNGVRPRFL-E---GSLEAA---L---PFGPFDLLVANLYAELHAALAPRYREALVPGGRALLTGI  219 (254)
T ss_dssp             HHTTCCCEEE-E---SCHHHH---G---GGCCEEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             HHcCCceeEE-e---cccccc---c---cccccchhhhccccccHHHHHHHHHHhcCCCcEEEEEec
Confidence              34432211 1   122211   1   235799999765433   245667789999999997653

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.53  E-value=0.0004  Score=58.88  Aligned_cols=100  Identities=12%  Similarity=0.166  Sum_probs=69.4

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHh
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQN  246 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~  246 (361)
                      ++++++++|++||=+|||- |..++.+|+..|+ .|++++.+++-.+.+++    .|...-+.+..  .++.    +   
T Consensus        55 ~~~l~l~~G~~VLDiGCG~-G~~a~~~a~~~g~-~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~--~d~~----~---  123 (285)
T d1kpga_          55 LGKLGLQPGMTLLDVGCGW-GATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLL--AGWE----Q---  123 (285)
T ss_dssp             HTTTTCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEE--SCGG----G---
T ss_pred             HHHcCCCCCCEEEEecCcc-hHHHHHHHhcCCc-ceEEEeccHHHHHHHHHHHHhhhhhhhhHHHH--hhhh----c---
Confidence            4568999999999999876 7788899999998 79999999987766654    33211111111  1221    1   


Q ss_pred             hcCCCccEEEE-----ccCCh---HHHHHHHHhhcCCCEEEEEc
Q 018075          247 AMGSGIDVSFD-----CVGFD---KTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       247 ~~~~~~d~vld-----~~g~~---~~~~~~~~~l~~~G~~v~~g  282 (361)
                       .+..+|.|+.     .++..   ..++.+.+.|+|||++++-.
T Consensus       124 -~~~~fD~i~si~~~eh~~~~~~~~~~~~~~r~LkpgG~~~l~~  166 (285)
T d1kpga_         124 -FDEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHT  166 (285)
T ss_dssp             -CCCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             -ccccccceeeehhhhhcCchhHHHHHHHHHhhcCCCCcEEEEE
Confidence             1457888765     44432   46778889999999998643

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.53  E-value=0.00039  Score=58.84  Aligned_cols=99  Identities=12%  Similarity=0.245  Sum_probs=68.2

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHh
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQN  246 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~  246 (361)
                      ++.+++++|++||=+|||- |..+..+++..|+ .|++++.+++..+.+++    .|....+....  .+..    +   
T Consensus        45 ~~~l~l~~g~~VLDiGCG~-G~~a~~~a~~~g~-~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~--~d~~----~---  113 (280)
T d2fk8a1          45 LDKLDLKPGMTLLDIGCGW-GTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLL--QGWE----D---  113 (280)
T ss_dssp             HTTSCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEE--SCGG----G---
T ss_pred             HHHcCCCCCCEEEEecCCc-hHHHHHHHHhCce-eEEEecchHHHHHHHHHHHHhhccccchhhhh--hhhh----h---
Confidence            4558899999999999875 4567788888898 79999999987776655    34322111111  1111    1   


Q ss_pred             hcCCCccEEEE-----ccCCh---HHHHHHHHhhcCCCEEEEE
Q 018075          247 AMGSGIDVSFD-----CVGFD---KTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       247 ~~~~~~d~vld-----~~g~~---~~~~~~~~~l~~~G~~v~~  281 (361)
                       ....||.|+.     .++..   ..++.+.+.|+|||++++-
T Consensus       114 -~~~~fD~i~si~~~eh~~~~~~~~~f~~i~~~LkpgG~~~i~  155 (280)
T d2fk8a1         114 -FAEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQ  155 (280)
T ss_dssp             -CCCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEE
T ss_pred             -hccchhhhhHhhHHHHhhhhhHHHHHHHHHhccCCCceEEEE
Confidence             1467999865     33322   4578889999999999874

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.48  E-value=0.00018  Score=62.08  Aligned_cols=108  Identities=19%  Similarity=0.243  Sum_probs=70.7

Q ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-EEEEEeCChhHHHHHHHc----C-----------CCEEeecCC
Q 018075          169 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAP-RIIITDVDVQRLSIARNL----G-----------ADETAKVST  232 (361)
Q Consensus       169 ~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~-~vv~v~~~~~~~~~~~~l----g-----------~~~~~~~~~  232 (361)
                      +.+..++++||++||=.|+|+ |.+++.+|+..|.. +|++++.+++..+.+++-    +           .+.+.....
T Consensus        89 ~Il~~l~i~pG~rVLE~GtGs-G~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~  167 (324)
T d2b25a1          89 MILSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHK  167 (324)
T ss_dssp             HHHHHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEES
T ss_pred             HHHHHhCCCCCCEEEEecccc-cHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEEec
Confidence            345668999999999999887 88999999998743 799999999988877641    1           111111111


Q ss_pred             CccchhHHHHHHHhhcCCCccEEEEccCCh-HHHHHHHHhhcCCCEEEEEcc
Q 018075          233 DIEDVDTDVGKIQNAMGSGIDVSFDCVGFD-KTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~d~vld~~g~~-~~~~~~~~~l~~~G~~v~~g~  283 (361)
                         ++......+   ....||.||=-+..+ ..+..+.+.|+|||+++.+..
T Consensus       168 ---di~~~~~~~---~~~~fD~V~LD~p~P~~~l~~~~~~LKpGG~lv~~~P  213 (324)
T d2b25a1         168 ---DISGATEDI---KSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVV  213 (324)
T ss_dssp             ---CTTCCC----------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred             ---chhhccccc---CCCCcceEeecCcCHHHHHHHHHHhccCCCEEEEEeC
Confidence               111111111   134688876444433 478899999999999998753

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=97.37  E-value=0.00025  Score=58.35  Aligned_cols=100  Identities=16%  Similarity=0.207  Sum_probs=68.4

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhh
Q 018075          172 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       172 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~  247 (361)
                      +.+.+++|++||=+|||. |..+..+++. +. .|+++|.+++-.+.+++    .+.+.+.-...+..++.     +   
T Consensus        10 ~~~~~~~~~rILDiGcGt-G~~~~~la~~-~~-~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~~-----~---   78 (234)
T d1xxla_          10 KTAECRAEHRVLDIGAGA-GHTALAFSPY-VQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP-----F---   78 (234)
T ss_dssp             HHHTCCTTCEEEEESCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC-----S---
T ss_pred             HHhCCCCCCEEEEeCCcC-cHHHHHHHHh-CC-eEEEEeCChhhhhhhhhhhccccccccccccccccccc-----c---
Confidence            568999999999999987 8888888875 56 79999999876655543    34332221111111110     1   


Q ss_pred             cCCCccEEEEccCC------hHHHHHHHHhhcCCCEEEEEc
Q 018075          248 MGSGIDVSFDCVGF------DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       248 ~~~~~d~vld~~g~------~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ....||+|+.+-.-      ...++.+.+.|+|||+++...
T Consensus        79 ~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~~~~~~  119 (234)
T d1xxla_          79 PDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVD  119 (234)
T ss_dssp             CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccccceeeeeceeecccCHHHHHHHHHHeeCCCcEEEEEE
Confidence            13579999874321      246888999999999998864

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=97.34  E-value=0.00023  Score=59.05  Aligned_cols=101  Identities=23%  Similarity=0.261  Sum_probs=69.5

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhh
Q 018075          172 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       172 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~  247 (361)
                      ...+++||++||=+|||. |..+..+++..|+ .|++++.+++-.+.+++    .|...-+.+..  .+..+    +  .
T Consensus        27 ~~~~l~pg~~VLDiGCG~-G~~~~~la~~~~~-~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~--~d~~~----~--~   96 (245)
T d1nkva_          27 RVLRMKPGTRILDLGSGS-GEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIH--NDAAG----Y--V   96 (245)
T ss_dssp             HHTCCCTTCEEEEETCTT-CHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE--SCCTT----C--C
T ss_pred             HHcCCCCCCEEEEEcCCC-CHHHHHHHHhcCC-EEEEEecccchhhHHHHHHHHhhccccchhhh--hHHhh----c--c
Confidence            458999999999999876 6677788888898 79999999887665544    45432111111  12111    1  1


Q ss_pred             cCCCccEEEEcc------CChHHHHHHHHhhcCCCEEEEEc
Q 018075          248 MGSGIDVSFDCV------GFDKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       248 ~~~~~d~vld~~------g~~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ....||+|+..-      .-...++.+.+.|+|||+++...
T Consensus        97 ~~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPGG~l~i~~  137 (245)
T d1nkva_          97 ANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  137 (245)
T ss_dssp             CSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             ccCceeEEEEEehhhccCCHHHHHHHHHHHcCcCcEEEEEe
Confidence            246799998631      23457888999999999998754

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=97.33  E-value=0.0016  Score=54.23  Aligned_cols=106  Identities=13%  Similarity=0.172  Sum_probs=68.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-H---HcCCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-R---NLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~---~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      +|+++||.| ++++|.+.++.+...|+ .|+.+++++++.+.+ +   +.+... .+..+ .+..+..+.+.++.+..+.
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~   85 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG   85 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence            689999998 58999999999889999 688888988776433 2   234322 11111 2233444444444433345


Q ss_pred             CccEEEEccCCh----------H---------------HHHHHHHhh--cCCCEEEEEccC
Q 018075          251 GIDVSFDCVGFD----------K---------------TMSTALNAT--RPGGKVCLIGLA  284 (361)
Q Consensus       251 ~~d~vld~~g~~----------~---------------~~~~~~~~l--~~~G~~v~~g~~  284 (361)
                      ++|+++++.|..          +               ..+...+.|  ..+|+++.++..
T Consensus        86 ~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~  146 (259)
T d2ae2a_          86 KLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSV  146 (259)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCG
T ss_pred             CceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccc
Confidence            799999998754          1               223344444  467999988753

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.33  E-value=0.0011  Score=55.18  Aligned_cols=83  Identities=16%  Similarity=0.214  Sum_probs=55.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HH---cCCCE-E--eecCCCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN---LGADE-T--AKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      +|+++||.| ++++|.+.++.+...|+ .|+.+++++++.+.+ ++   .+... .  .|. ++..+..+.+.++.+..+
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~~~   84 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDA-SLRPEREKLMQTVSSMFG   84 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-TSHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEeccC-CCHHHHHHHHHHHHHHhC
Confidence            689999998 58999999999999999 688888888765433 22   23221 1  222 233344445555444334


Q ss_pred             CCccEEEEccCCh
Q 018075          250 SGIDVSFDCVGFD  262 (361)
Q Consensus       250 ~~~d~vld~~g~~  262 (361)
                      +.+|+++++.|..
T Consensus        85 g~idilvnnAG~~   97 (259)
T d1xq1a_          85 GKLDILINNLGAI   97 (259)
T ss_dssp             TCCSEEEEECCC-
T ss_pred             CCccccccccccc
Confidence            5799999998854

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=97.33  E-value=0.0011  Score=54.78  Aligned_cols=103  Identities=23%  Similarity=0.320  Sum_probs=70.6

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCCE---EeecCCCccchhHHHHHHHhhcCCCc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADE---TAKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      +|+++||.| ++++|.+.++.+...|+ .|+.+++++++.+ ++++++...   ..|+ .+.++..+.+.++.+. -+++
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~-~g~i   79 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGA-KVIGTATSENGAQAISDYLGANGKGLMLNV-TDPASIESVLEKIRAE-FGEV   79 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCT-TCHHHHHHHHHHHHHH-TCSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCCcEEEEEe-cCHHHhhhhhhhhhcc-cCCc
Confidence            588899998 58999999999999999 6888889888765 445565432   1222 2334444555555432 3589


Q ss_pred             cEEEEccCCh-------------------------HHHHHHHHhh--cCCCEEEEEcc
Q 018075          253 DVSFDCVGFD-------------------------KTMSTALNAT--RPGGKVCLIGL  283 (361)
Q Consensus       253 d~vld~~g~~-------------------------~~~~~~~~~l--~~~G~~v~~g~  283 (361)
                      |+++++.|..                         ...+.+++.|  +.+|+++.++.
T Consensus        80 DilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS  137 (243)
T d1q7ba_          80 DILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGS  137 (243)
T ss_dssp             SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             ceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecc
Confidence            9999988654                         1344555666  45799998874

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=97.32  E-value=0.00069  Score=53.62  Aligned_cols=105  Identities=10%  Similarity=0.007  Sum_probs=67.7

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCC-CEEe-------ecCCC-----ccch
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA-DETA-------KVSTD-----IEDV  237 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~-~~~~-------~~~~~-----~~~~  237 (361)
                      +....+.||.+||..|||. |..++.+|+ .|+ .|+++|.+++..+.+++... ....       .....     ..++
T Consensus        13 ~~~l~~~~~~rvLd~GCG~-G~~a~~la~-~G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~   89 (201)
T d1pjza_          13 WSSLNVVPGARVLVPLCGK-SQDMSWLSG-QGY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDF   89 (201)
T ss_dssp             HHHHCCCTTCEEEETTTCC-SHHHHHHHH-HCC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECC
T ss_pred             HHHcCCCCCCEEEEecCcC-CHHHHHHHH-cCC-ceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccc
Confidence            4446789999999999987 788888887 498 79999999999888877421 1000       00000     0011


Q ss_pred             hHHHHHHHhhcCCCccEEEEccCC--------hHHHHHHHHhhcCCCEEEEEc
Q 018075          238 DTDVGKIQNAMGSGIDVSFDCVGF--------DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       238 ~~~~~~~~~~~~~~~d~vld~~g~--------~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ..    +.......+|+|++...-        ...++.+.+.|+|||+++...
T Consensus        90 ~~----l~~~~~~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~LkpgG~l~l~~  138 (201)
T d1pjza_          90 FA----LTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT  138 (201)
T ss_dssp             SS----STHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred             cc----cccccccceeEEEEEeeeEecchhhhHHHHHHHHHhcCCCcEEEEEE
Confidence            00    000012468999884331        135677889999999987654

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=97.32  E-value=0.00035  Score=57.15  Aligned_cols=103  Identities=18%  Similarity=0.217  Sum_probs=69.7

Q ss_pred             HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHH
Q 018075          170 ACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       170 ~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~  245 (361)
                      .++.++++++++||=+|||. |..+..+++. |. .++++|.+++-.+.+++    .+.+.+--...+..+..     + 
T Consensus         7 ll~~~~l~~~~rVLDiGcG~-G~~~~~l~~~-~~-~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~-----~-   77 (231)
T d1vl5a_           7 LMQIAALKGNEEVLDVATGG-GHVANAFAPF-VK-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP-----F-   77 (231)
T ss_dssp             HHHHHTCCSCCEEEEETCTT-CHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC-----S-
T ss_pred             HHHhcCCCCcCEEEEecccC-cHHHHHHHHh-CC-EEEEEECCHHHHhhhhhccccccccccccccccccccc-----c-
Confidence            35668899999999999884 7777777764 66 79999999987666544    45443221112111110     1 


Q ss_pred             hhcCCCccEEEEccC-----Ch-HHHHHHHHhhcCCCEEEEEcc
Q 018075          246 NAMGSGIDVSFDCVG-----FD-KTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       246 ~~~~~~~d~vld~~g-----~~-~~~~~~~~~l~~~G~~v~~g~  283 (361)
                        ....||+|+..-.     .+ ..+..+.+.|+|||+++....
T Consensus        78 --~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~  119 (231)
T d1vl5a_          78 --TDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDN  119 (231)
T ss_dssp             --CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             --cccccccccccccccccCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence              1357999987432     22 468889999999999998653

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=97.28  E-value=0.00048  Score=56.75  Aligned_cols=93  Identities=19%  Similarity=0.307  Sum_probs=69.0

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      ..++.+||=+|||. |..+..+++ .|+ .|+++|.+++..+.+++.+....+..+.  .++.     +   ....||+|
T Consensus        40 ~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~giD~s~~~l~~a~~~~~~~~~~~~~--~~l~-----~---~~~~fD~i  106 (246)
T d2avna1          40 LKNPCRVLDLGGGT-GKWSLFLQE-RGF-EVVLVDPSKEMLEVAREKGVKNVVEAKA--EDLP-----F---PSGAFEAV  106 (246)
T ss_dssp             CCSCCEEEEETCTT-CHHHHHHHT-TTC-EEEEEESCHHHHHHHHHHTCSCEEECCT--TSCC-----S---CTTCEEEE
T ss_pred             cCCCCEEEEECCCC-chhcccccc-cce-EEEEeecccccccccccccccccccccc--cccc-----c---ccccccce
Confidence            46788999999986 889988887 588 7999999999999999987665544222  2211     1   14679999


Q ss_pred             EEccC-------ChHHHHHHHHhhcCCCEEEEE
Q 018075          256 FDCVG-------FDKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       256 ld~~g-------~~~~~~~~~~~l~~~G~~v~~  281 (361)
                      +....       ....++.+.+.|+|||.++..
T Consensus       107 i~~~~~~~~~~d~~~~l~~i~r~Lk~gG~~ii~  139 (246)
T d2avna1         107 LALGDVLSYVENKDKAFSEIRRVLVPDGLLIAT  139 (246)
T ss_dssp             EECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             eeecchhhhhhhHHHHHHHHHhhcCcCcEEEEE
Confidence            86433       123577889999999998764

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.25  E-value=0.0011  Score=54.65  Aligned_cols=82  Identities=24%  Similarity=0.342  Sum_probs=58.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcCCCEEe-ecCCCccchhHHHHHHHhhcCCCccE
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADETA-KVSTDIEDVDTDVGKIQNAMGSGIDV  254 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~  254 (361)
                      +|+++||.| ++++|.+.++.+...|+ .|+.+++++++.+.+ +++++..+. |+ .+.++..+.+.++.+.. +++|+
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~~-g~iDi   80 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGAHPVVMDV-ADPASVERGFAEALAHL-GRLDG   80 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTCEEEECCT-TCHHHHHHHHHHHHHHH-SSCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCeEEEEec-CCHHHHHHHHHHHHHhc-CCceE
Confidence            578999998 58999999999999999 688888988876544 556654432 22 33445555555554433 46999


Q ss_pred             EEEccCCh
Q 018075          255 SFDCVGFD  262 (361)
Q Consensus       255 vld~~g~~  262 (361)
                      ++++.|..
T Consensus        81 lVnnAG~~   88 (242)
T d1ulsa_          81 VVHYAGIT   88 (242)
T ss_dssp             EEECCCCC
T ss_pred             EEECCccc
Confidence            99988754

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=97.22  E-value=0.0023  Score=53.29  Aligned_cols=104  Identities=22%  Similarity=0.331  Sum_probs=68.7

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH----HHcCCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      +|+++||.| ++++|.+.+..+...|+ .|+.+++++++.+.+    ++.|.+. .+..+ .+..+..+.+.++.+.. +
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   81 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF-G   81 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh-C
Confidence            688999998 58999999999999999 688898988776533    3334332 11111 23344555555544333 4


Q ss_pred             CccEEEEccCCh--------------------------HHHHHHHHhh--cCCCEEEEEcc
Q 018075          251 GIDVSFDCVGFD--------------------------KTMSTALNAT--RPGGKVCLIGL  283 (361)
Q Consensus       251 ~~d~vld~~g~~--------------------------~~~~~~~~~l--~~~G~~v~~g~  283 (361)
                      ++|+++++.|..                          ...+.+++.|  +.+|+++.++.
T Consensus        82 ~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS  142 (260)
T d1zema1          82 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTAS  142 (260)
T ss_dssp             CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             CCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeec
Confidence            799999988743                          1333344444  57899998874

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.20  E-value=0.0039  Score=44.56  Aligned_cols=92  Identities=12%  Similarity=0.011  Sum_probs=61.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeC--ChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDV--DVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~--~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      .|.+|||+|+|.+|..-++.+...|++ +++++.  +++-..++++-+...... .-...+            -.++++|
T Consensus        11 ~~k~vlVvG~G~va~~ka~~ll~~ga~-v~v~~~~~~~~~~~~~~~~~i~~~~~-~~~~~d------------l~~~~lv   76 (113)
T d1pjqa1          11 RDRDCLIVGGGDVAERKARLLLEAGAR-LTVNALTFIPQFTVWANEGMLTLVEG-PFDETL------------LDSCWLA   76 (113)
T ss_dssp             BTCEEEEECCSHHHHHHHHHHHHTTBE-EEEEESSCCHHHHHHHTTTSCEEEES-SCCGGG------------GTTCSEE
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCe-EEEEeccCChHHHHHHhcCCceeecc-CCCHHH------------hCCCcEE
Confidence            578999999999999999999999995 454433  233334443322322211 111111            2479999


Q ss_pred             EEccCChHHHHHHHHhhcCCCEEEEEcc
Q 018075          256 FDCVGFDKTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       256 ld~~g~~~~~~~~~~~l~~~G~~v~~g~  283 (361)
                      +.+.+.+..-..+....++.|.++-+..
T Consensus        77 ~~at~d~~~n~~i~~~a~~~~ilVNv~D  104 (113)
T d1pjqa1          77 IAATDDDTVNQRVSDAAESRRIFCNVVD  104 (113)
T ss_dssp             EECCSCHHHHHHHHHHHHHTTCEEEETT
T ss_pred             eecCCCHHHHHHHHHHHHHcCCEEEeCC
Confidence            9999988666678888888897776543

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.20  E-value=0.00051  Score=55.42  Aligned_cols=104  Identities=12%  Similarity=0.114  Sum_probs=67.4

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcC--CCEEeecCCCccchhHHHHHHHhhcCC
Q 018075          173 RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG--ADETAKVSTDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       173 ~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg--~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (361)
                      +..++||++||=+|||. |..+..+++..+-..|++++.+++..+.+++.-  ...+.....+..+... .    .....
T Consensus        51 ~l~lkpg~~VLDlGcG~-G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~-~----~~~~~  124 (209)
T d1nt2a_          51 RLKLRGDERVLYLGAAS-GTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWK-Y----SGIVE  124 (209)
T ss_dssp             CCCCCSSCEEEEETCTT-SHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGG-T----TTTCC
T ss_pred             cCCCCCCCEEEEeCCcC-CHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCccc-c----ccccc
Confidence            47899999999999877 778888898887658999999998776654421  1111111111111111 0    01124


Q ss_pred             CccEEEEccCCh----HHHHHHHHhhcCCCEEEEEc
Q 018075          251 GIDVSFDCVGFD----KTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       251 ~~d~vld~~g~~----~~~~~~~~~l~~~G~~v~~g  282 (361)
                      .+|+++......    ..+..+.+.|+|||+++..-
T Consensus       125 ~vd~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  160 (209)
T d1nt2a_         125 KVDLIYQDIAQKNQIEILKANAEFFLKEKGEVVIMV  160 (209)
T ss_dssp             CEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             eEEEEEecccChhhHHHHHHHHHHHhccCCeEEEEE
Confidence            578887654322    24677788999999998763

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=97.19  E-value=0.0019  Score=53.58  Aligned_cols=82  Identities=27%  Similarity=0.312  Sum_probs=57.1

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCCE-E--eecCCCccchhHHHHHHHhhcCCCc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADE-T--AKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      +|+++||.| ++++|.+.++.+...|+ .|+.+++++++.+ .+++++... .  .|+ .+.++..+.+.++.+.. +++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~~-g~i   80 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDV-TIEEDWQRVVAYAREEF-GSV   80 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCT-TCHHHHHHHHHHHHHHH-SCC
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEccc-CCHHHHHHHHHHHHHHc-CCc
Confidence            689999998 58999999998888999 6888888887664 455566332 1  222 23345555555554333 479


Q ss_pred             cEEEEccCCh
Q 018075          253 DVSFDCVGFD  262 (361)
Q Consensus       253 d~vld~~g~~  262 (361)
                      |+++++.|..
T Consensus        81 DilVnnAg~~   90 (254)
T d1hdca_          81 DGLVNNAGIS   90 (254)
T ss_dssp             CEEEECCCCC
T ss_pred             cEEEecCccc
Confidence            9999988754

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=97.19  E-value=0.00057  Score=54.00  Aligned_cols=101  Identities=19%  Similarity=0.216  Sum_probs=67.4

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCC-EEeecCCCccchhHHHHHHH
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGAD-ETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~~~~~~  245 (361)
                      +...++++|++||=+|||. |..++.+|+. +. +|++++.+++..+.+++    +|.. .+....   .+..+...   
T Consensus        26 l~~l~~~~g~~VLDiGcGs-G~~s~~lA~~-~~-~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~---gda~~~~~---   96 (186)
T d1l3ia_          26 MCLAEPGKNDVAVDVGCGT-GGVTLELAGR-VR-RVYAIDRNPEAISTTEMNLQRHGLGDNVTLME---GDAPEALC---   96 (186)
T ss_dssp             HHHHCCCTTCEEEEESCTT-SHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHTTCCTTEEEEE---SCHHHHHT---
T ss_pred             HHhcCCCCCCEEEEEECCe-Eccccccccc-ce-EEEEecCCHHHHHHHHHHHHHcCCCcceEEEE---Cchhhccc---
Confidence            3457889999999999765 5566677764 44 79999999987776654    5542 322211   23322221   


Q ss_pred             hhcCCCccEEEEccCC---hHHHHHHHHhhcCCCEEEEEc
Q 018075          246 NAMGSGIDVSFDCVGF---DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       246 ~~~~~~~d~vld~~g~---~~~~~~~~~~l~~~G~~v~~g  282 (361)
                        ....+|.|+.....   ...++.+.+.|+|+|+++...
T Consensus        97 --~~~~~D~v~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~  134 (186)
T d1l3ia_          97 --KIPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTA  134 (186)
T ss_dssp             --TSCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             --ccCCcCEEEEeCccccchHHHHHHHHHhCcCCEEEEEe
Confidence              24679999875443   245777888999999998653

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.14  E-value=0.005  Score=50.61  Aligned_cols=81  Identities=20%  Similarity=0.206  Sum_probs=54.9

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccE
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV  254 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  254 (361)
                      -+|+++||.| ++++|.+.++.+...|+ .|+.+++++++.+ ..++++....+..+-  .+. +.++++.+. -+++|+
T Consensus         5 L~GK~~lITGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv--~d~-~~v~~~~~~-~g~iDi   79 (244)
T d1pr9a_           5 LAGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDL--GDW-EATERALGS-VGPVDL   79 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCT--TCH-HHHHHHHTT-CCCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeC--CCH-HHHHHHHHH-hCCceE
Confidence            3789999998 58999999999999999 6888999888765 445555333332222  122 223333322 247999


Q ss_pred             EEEccCCh
Q 018075          255 SFDCVGFD  262 (361)
Q Consensus       255 vld~~g~~  262 (361)
                      ++++.|..
T Consensus        80 lVnnAg~~   87 (244)
T d1pr9a_          80 LVNNAAVA   87 (244)
T ss_dssp             EEECCCCC
T ss_pred             EEeccccc
Confidence            99988754

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=97.14  E-value=0.003  Score=52.28  Aligned_cols=106  Identities=15%  Similarity=0.218  Sum_probs=71.8

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCCEEe-ecC-CCccchhHHHHHHHhhcCCCc
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADETA-KVS-TDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      -+|+++||.| ++++|.+.++.+...|+ .|+.+++++++.+ ..++++..... ..+ .+..+..+.+.++.+. -+++
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~-~g~i   81 (253)
T d1hxha_           4 LQGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRR-LGTL   81 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHH-HCSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHH-hCCC
Confidence            3688999998 68999999999999999 6888888887765 45667754332 111 2333444444444432 2579


Q ss_pred             cEEEEccCCh-------------------------HHHHHHHHhhc-CCCEEEEEccC
Q 018075          253 DVSFDCVGFD-------------------------KTMSTALNATR-PGGKVCLIGLA  284 (361)
Q Consensus       253 d~vld~~g~~-------------------------~~~~~~~~~l~-~~G~~v~~g~~  284 (361)
                      |+++++.|..                         ...+.+++.|. .+|+++.++..
T Consensus        82 DilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~  139 (253)
T d1hxha_          82 NVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASV  139 (253)
T ss_dssp             CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCG
T ss_pred             CeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccch
Confidence            9999998754                         13444555664 57999988743

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.10  E-value=0.00011  Score=60.40  Aligned_cols=98  Identities=12%  Similarity=0.081  Sum_probs=64.6

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCC---EEeecCCCccchhHHHHHHHhhcCCCc
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD---ETAKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      ..+|.+||-+|+|. |..+..+++..+. .+++++.+++-.+.+++....   .+....   .+......   ......|
T Consensus        51 ~~~g~~VLdIGcG~-G~~a~~~a~~~~~-~v~~id~s~~~~~~a~~~~~~~~~~~~~~~---~~~~~~~~---~~~~~~f  122 (229)
T d1zx0a1          51 SSKGGRVLEVGFGM-AIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLK---GLWEDVAP---TLPDGHF  122 (229)
T ss_dssp             TTTCEEEEEECCTT-SHHHHHHHTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEE---SCHHHHGG---GSCTTCE
T ss_pred             ccCCCeEEEeeccc-hHHHHHHHHcCCC-eEEEeCCCHHHHHHHHHHhhhccccccccc---cccccccc---ccccccc
Confidence            47899999999877 7788888886655 799999999988888775422   111111   12211111   1124578


Q ss_pred             cEEE-EccCCh----------HHHHHHHHhhcCCCEEEEE
Q 018075          253 DVSF-DCVGFD----------KTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       253 d~vl-d~~g~~----------~~~~~~~~~l~~~G~~v~~  281 (361)
                      |.++ |.+...          ..+..+.+.|+|||+++..
T Consensus       123 D~i~fD~~~~~~~~~~~~~~~~~~~~~~r~LkpGG~~~~~  162 (229)
T d1zx0a1         123 DGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC  162 (229)
T ss_dssp             EEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred             cceeecccccccccccccCHHHHHHHHHHHcCCCcEEEEE
Confidence            8884 543222          2556788999999999864

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.10  E-value=0.0051  Score=50.57  Aligned_cols=107  Identities=21%  Similarity=0.289  Sum_probs=68.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH----HHcCCC-EEeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGAD-ETAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~-~~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      .|+.+||.| ++++|...+..+...|+ .|+.+++++++.+.+    ++.|.. ..+..+ ++.++....++++.+. -+
T Consensus         6 ~Gkv~lITGas~GIG~~ia~~la~~G~-~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~-~g   83 (244)
T d1yb1a_           6 TGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE-IG   83 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH-TC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH-cC
Confidence            689999998 58999999998888999 688899998876533    334433 222222 2223344444444332 35


Q ss_pred             CccEEEEccCCh-------------------------HHHHHHHHhhc--CCCEEEEEccCCC
Q 018075          251 GIDVSFDCVGFD-------------------------KTMSTALNATR--PGGKVCLIGLAKT  286 (361)
Q Consensus       251 ~~d~vld~~g~~-------------------------~~~~~~~~~l~--~~G~~v~~g~~~~  286 (361)
                      ++|+++++.|..                         ...+.+++.|.  ..|+++.++....
T Consensus        84 ~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~  146 (244)
T d1yb1a_          84 DVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAG  146 (244)
T ss_dssp             CCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-
T ss_pred             CCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchh
Confidence            799999998865                         12333444453  4588998876554

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.08  E-value=0.004  Score=51.64  Aligned_cols=83  Identities=19%  Similarity=0.281  Sum_probs=56.8

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HH---cCCC-EEe----ecCCCccchhHHHHHHHh
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RN---LGAD-ETA----KVSTDIEDVDTDVGKIQN  246 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~---lg~~-~~~----~~~~~~~~~~~~~~~~~~  246 (361)
                      -+|+.+||.| ++++|.+.+..+...|+ .|+.+++++++.+.+ ++   .+.. .++    |+ ++.++..+.+..+.+
T Consensus         8 lk~Kv~lITGas~GIG~aiA~~la~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dl-s~~~~v~~~v~~~~~   85 (257)
T d1xg5a_           8 WRDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDL-SNEEDILSMFSAIRS   85 (257)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCT-TCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccC-CCHHHHHHHHHHHHH
Confidence            3578899998 58999999999889999 688888988875543 22   3321 222    22 334455555555554


Q ss_pred             hcCCCccEEEEccCCh
Q 018075          247 AMGSGIDVSFDCVGFD  262 (361)
Q Consensus       247 ~~~~~~d~vld~~g~~  262 (361)
                      .. +++|+++++.|..
T Consensus        86 ~~-g~iD~lVnnAg~~  100 (257)
T d1xg5a_          86 QH-SGVDICINNAGLA  100 (257)
T ss_dssp             HH-CCCSEEEECCCCC
T ss_pred             hc-CCCCEEEeccccc
Confidence            33 4699999998764

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=97.07  E-value=0.0011  Score=54.06  Aligned_cols=103  Identities=15%  Similarity=0.127  Sum_probs=69.8

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEeCChhHHHHHHHc----CCCEEeecCCCccchhHHHHHHH
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~  245 (361)
                      ++...++||++||=+|||+ |..+..+++..|- -+|++++.+++..+.+++.    +-...+..+.  ..... ..   
T Consensus        66 l~~l~i~pG~~VLDlGaGs-G~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~--~~~~~-~~---  138 (227)
T d1g8aa_          66 LKNFPIKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDA--TKPEE-YR---  138 (227)
T ss_dssp             CCCCCCCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCT--TCGGG-GT---
T ss_pred             ccccccCCCCEEEEeccCC-CHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEEC--CCccc-cc---
Confidence            4457899999999999887 8899999999863 3799999999887766553    2112222111  11111 10   


Q ss_pred             hhcCCCccEEEEccCCh----HHHHHHHHhhcCCCEEEEE
Q 018075          246 NAMGSGIDVSFDCVGFD----KTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       246 ~~~~~~~d~vld~~g~~----~~~~~~~~~l~~~G~~v~~  281 (361)
                       .....+|+++..+..+    ..+..+.+.|+|||+++++
T Consensus       139 -~~~~~vD~i~~d~~~~~~~~~~l~~~~~~LkpgG~lvi~  177 (227)
T d1g8aa_         139 -ALVPKVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA  177 (227)
T ss_dssp             -TTCCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             -ccccceEEEEEEccccchHHHHHHHHHHhcccCCeEEEE
Confidence             1135689888755433    2577788899999999875

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=97.04  E-value=0.0022  Score=54.00  Aligned_cols=100  Identities=12%  Similarity=0.142  Sum_probs=68.3

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCC-EEeecCCCccchhHHHHHHHhh
Q 018075          173 RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGAD-ETAKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       173 ~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~~~~~~~~  247 (361)
                      ...+.+|++||=+|||. |..+..+++..|+ .|++++.++...+.+++    .|.. .+-....+..++.        .
T Consensus        62 ~~~l~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~--------~  131 (282)
T d2o57a1          62 TGVLQRQAKGLDLGAGY-GGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP--------C  131 (282)
T ss_dssp             TTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS--------S
T ss_pred             hcCCCCCCEEEEeCCCC-cHHHhhhhccCCc-EEEEEeccchhhhhhhccccccccccccccccccccccc--------c
Confidence            46899999999999886 7788889988888 79999999887666554    3432 1111111111110        1


Q ss_pred             cCCCccEEEEcc-----CC-hHHHHHHHHhhcCCCEEEEEc
Q 018075          248 MGSGIDVSFDCV-----GF-DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       248 ~~~~~d~vld~~-----g~-~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ....||+|+..-     .. ...++.+.+.|+|||+++...
T Consensus       132 ~~~sfD~V~~~~~l~h~~d~~~~l~~~~~~LkpgG~l~~~~  172 (282)
T d2o57a1         132 EDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITD  172 (282)
T ss_dssp             CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccccchhhccchhhhccCHHHHHHHHHHhcCCCcEEEEEE
Confidence            235799997632     21 246888999999999998865

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=97.01  E-value=0.0027  Score=52.77  Aligned_cols=84  Identities=15%  Similarity=0.237  Sum_probs=57.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH----HHHcCCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI----ARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~----~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      +|+++||.| ++++|.+.++.+...|+ .|+.+++++++.+.    +++.+... .+..+ .+..+..+.+.++.+..+.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g   83 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG   83 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            789999998 69999999999999999 68888888876543    33344433 22222 2233444444555444456


Q ss_pred             CccEEEEccCCh
Q 018075          251 GIDVSFDCVGFD  262 (361)
Q Consensus       251 ~~d~vld~~g~~  262 (361)
                      .+|+++++.|..
T Consensus        84 ~idilinnag~~   95 (258)
T d1ae1a_          84 KLNILVNNAGVV   95 (258)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CcEEEecccccc
Confidence            799999988755

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.00  E-value=0.0074  Score=49.76  Aligned_cols=103  Identities=14%  Similarity=0.289  Sum_probs=69.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-----HHHHcCCCEE---eecCCCccchhHHHHHHHhhc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-----IARNLGADET---AKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-----~~~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      +|+++||.| ++++|.+.++.+...|+ .|+.+++++++.+     +.++.|....   .|+ .+..+..+.+.++.+..
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv-~~~~~v~~~~~~~~~~~   81 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDV-SNYEEVKKLLEAVKEKF   81 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT-TCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccC-CCHHHHHHHHHHHHHHc
Confidence            588999998 58999999999999999 6888888877643     2344454322   232 23344455555544322


Q ss_pred             CCCccEEEEccCCh-------------------------HHHHHHHHhh--cCCCEEEEEcc
Q 018075          249 GSGIDVSFDCVGFD-------------------------KTMSTALNAT--RPGGKVCLIGL  283 (361)
Q Consensus       249 ~~~~d~vld~~g~~-------------------------~~~~~~~~~l--~~~G~~v~~g~  283 (361)
                       +++|+++++.|..                         ...+.+++.|  +.+|+++.++.
T Consensus        82 -g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S  142 (251)
T d1vl8a_          82 -GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGS  142 (251)
T ss_dssp             -SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECC
T ss_pred             -CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhccccccccccccccc
Confidence             4799999998754                         1445566667  34689998864

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.99  E-value=0.003  Score=52.80  Aligned_cols=84  Identities=15%  Similarity=0.131  Sum_probs=52.3

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH-----cCCCE-EeecCCC-ccchhHHHHHHHhhc
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-----LGADE-TAKVSTD-IEDVDTDVGKIQNAM  248 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-----lg~~~-~~~~~~~-~~~~~~~~~~~~~~~  248 (361)
                      -+|+++||.| ++++|.+.+..+...|+ .|+.+++++++.+.+.+     .+... ....+.. ............. .
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~-~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~   89 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGK-L   89 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHH-H
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHH-H
Confidence            4689999998 58999999998888999 68889999887765432     23222 1111111 1122222222222 2


Q ss_pred             CCCccEEEEccCCh
Q 018075          249 GSGIDVSFDCVGFD  262 (361)
Q Consensus       249 ~~~~d~vld~~g~~  262 (361)
                      .+.+|+++++.|..
T Consensus        90 ~g~~~~li~nag~~  103 (269)
T d1xu9a_          90 MGGLDMLILNHITN  103 (269)
T ss_dssp             HTSCSEEEECCCCC
T ss_pred             hCCccccccccccc
Confidence            35789998876643

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.97  E-value=0.0044  Score=54.70  Aligned_cols=110  Identities=15%  Similarity=0.133  Sum_probs=72.1

Q ss_pred             HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc-----------CCC--E-EeecCC
Q 018075          167 GVHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL-----------GAD--E-TAKVST  232 (361)
Q Consensus       167 a~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l-----------g~~--~-~~~~~~  232 (361)
                      ....++..++++|+++|=+|||. |..+.++|+..|...+++++.++...+.+++.           +..  . ......
T Consensus       205 i~~Il~~l~Lkpgd~fLDLGCG~-G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~~  283 (406)
T d1u2za_         205 LSDVYQQCQLKKGDTFMDLGSGV-GNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKK  283 (406)
T ss_dssp             HHHHHHHTTCCTTCEEEEESCTT-SHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESS
T ss_pred             HHHHHHHhCCCCCCEEEeCCCCC-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeeeee
Confidence            45567888999999999999987 99999999999977899999999876666542           111  0 111111


Q ss_pred             CccchhHHHHHHHhhcCCCccEEEEc-c-CCh---HHHHHHHHhhcCCCEEEEEc
Q 018075          233 DIEDVDTDVGKIQNAMGSGIDVSFDC-V-GFD---KTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~d~vld~-~-g~~---~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ...+. ......    -..+|+++-. . -.+   ..+..+++.|+|||+++...
T Consensus       284 ~f~~~-~~~d~~----~~~adVV~inn~~f~~~l~~~L~ei~r~LKPGGrIVs~~  333 (406)
T d1u2za_         284 SFVDN-NRVAEL----IPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK  333 (406)
T ss_dssp             CSTTC-HHHHHH----GGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             chhhc-cccccc----cccceEEEEecccCchHHHHHHHHHHHhcCCCcEEEEec
Confidence            10010 111111    2457888753 1 112   35677888999999999864

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=96.95  E-value=0.0075  Score=49.94  Aligned_cols=81  Identities=27%  Similarity=0.383  Sum_probs=54.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cC--CCE-E--eecCCCccchhHHHHHHHhh
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LG--ADE-T--AKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg--~~~-~--~~~~~~~~~~~~~~~~~~~~  247 (361)
                      +|+++||.| ++++|.+.++.+...|+ .|+.+++++++.+.+.+    .+  ... .  .|+ .+.++..+.+.++.+.
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dv-t~~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADV-SDEAQVEAYVTATTER   80 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCT-TSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccC-CCHHHHHHHHHHHHHH
Confidence            578899998 58999999999999999 68888888887654322    22  221 1  132 2334455555554432


Q ss_pred             cCCCccEEEEccCC
Q 018075          248 MGSGIDVSFDCVGF  261 (361)
Q Consensus       248 ~~~~~d~vld~~g~  261 (361)
                      . +++|+++++.|.
T Consensus        81 ~-G~iDiLVnnAG~   93 (258)
T d1iy8a_          81 F-GRIDGFFNNAGI   93 (258)
T ss_dssp             H-SCCSEEEECCCC
T ss_pred             h-CCCCEEEECCcc
Confidence            2 479999998873

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.93  E-value=0.0063  Score=50.31  Aligned_cols=104  Identities=15%  Similarity=0.226  Sum_probs=67.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcC----CCE----EeecCCCccchhHHHHHHHhh
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLG----ADE----TAKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg----~~~----~~~~~~~~~~~~~~~~~~~~~  247 (361)
                      .|+++||.| ++++|.+.++.+...|+ .|+.++++.++.+.+ +++.    ...    ..|+ ++..+..+.+.++.+.
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~   79 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDV-ADQQQLRDTFRKVVDH   79 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCT-TSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeec-CCHHHHHHHHHHHHHH
Confidence            478999998 58999999999999999 688888988775533 3332    111    1232 2334455555555433


Q ss_pred             cCCCccEEEEccCChH-----------------HHHHHHHhhc-----CCCEEEEEccC
Q 018075          248 MGSGIDVSFDCVGFDK-----------------TMSTALNATR-----PGGKVCLIGLA  284 (361)
Q Consensus       248 ~~~~~d~vld~~g~~~-----------------~~~~~~~~l~-----~~G~~v~~g~~  284 (361)
                      . +++|+++++.|...                 ..+.+++.|.     .+|+++.++..
T Consensus        80 ~-G~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~  137 (254)
T d2gdza1          80 F-GRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSL  137 (254)
T ss_dssp             H-SCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCG
T ss_pred             c-CCcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccH
Confidence            3 47999999987551                 2333444453     35889988743

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.90  E-value=0.0013  Score=53.77  Aligned_cols=106  Identities=10%  Similarity=0.092  Sum_probs=68.1

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCC--CEEeecCCCccchhHHHHHHHhhc
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA--DETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~--~~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      ++...++||++||=+|||. |..+..+++......|++++.++...+.+++.-.  ..+.....+.......    . ..
T Consensus        67 l~~l~ikpG~~VLDlGcGs-G~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~----~-~~  140 (230)
T d1g8sa_          67 LKVMPIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEY----A-NI  140 (230)
T ss_dssp             CCCCCCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGG----T-TT
T ss_pred             HHhCCCCCCCEEEEeCEEc-CHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCccc----c-cc
Confidence            4456799999999999887 8888899987654589999999988777766421  1111111111121111    0 01


Q ss_pred             CCCccEEEEccCCh----HHHHHHHHhhcCCCEEEEEc
Q 018075          249 GSGIDVSFDCVGFD----KTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       249 ~~~~d~vld~~g~~----~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ...+|+++......    ..+..+.+.|+|||++++.-
T Consensus       141 ~~~v~~i~~~~~~~~~~~~~l~~~~r~LKpgG~~~i~~  178 (230)
T d1g8sa_         141 VEKVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIAI  178 (230)
T ss_dssp             CCCEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cceeEEeeccccchHHHHHHHHHHHHhcccCceEEEEe
Confidence            23466666655322    24677788999999988763

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=96.88  E-value=0.0024  Score=50.46  Aligned_cols=77  Identities=13%  Similarity=0.281  Sum_probs=52.3

Q ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH-c----CCC-EEeecCCCccchhHHHHHHHhh
Q 018075          175 NVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-L----GAD-ETAKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       175 ~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-l----g~~-~~~~~~~~~~~~~~~~~~~~~~  247 (361)
                      .--+|+++||.| +|++|...+..+...|+ .|+.++++.++.+.+.+ +    ... ...+..    +. ..+.+.   
T Consensus        19 ~~l~gK~vlItGasgGIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~----~~-~~~~~~---   89 (191)
T d1luaa1          19 GSVKGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETA----DD-ASRAEA---   89 (191)
T ss_dssp             SCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECC----SH-HHHHHH---
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHhhcc-chhhcccchHHHHHHHHHHHhccchhhhhhhcc----cH-HHHHHH---
Confidence            345899999999 59999999999999999 68888898887654433 2    221 222221    22 122222   


Q ss_pred             cCCCccEEEEccCC
Q 018075          248 MGSGIDVSFDCVGF  261 (361)
Q Consensus       248 ~~~~~d~vld~~g~  261 (361)
                       -.++|++|++.|.
T Consensus        90 -~~~iDilin~Ag~  102 (191)
T d1luaa1          90 -VKGAHFVFTAGAI  102 (191)
T ss_dssp             -TTTCSEEEECCCT
T ss_pred             -hcCcCeeeecCcc
Confidence             2579999999774

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=96.87  E-value=0.0023  Score=49.58  Aligned_cols=83  Identities=16%  Similarity=0.279  Sum_probs=55.2

Q ss_pred             HHHHHhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcCCCEEeecCCCccchhHHHHHHH
Q 018075          168 VHACRRAN-VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGADETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       168 ~~~l~~~~-~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~~  245 (361)
                      +++|+..+ ..+|++|||+|+|+.+.+++.-+...|. .+..+.++.++.+.+ +.+.....+....    +..      
T Consensus         6 ~~~l~~~~~~~~~k~vlIlGaGGaarai~~al~~~g~-~i~I~nRt~~ka~~l~~~~~~~~~~~~~~----~~~------   74 (170)
T d1nyta1           6 LSDLERLSFIRPGLRILLIGAGGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTGSIQALS----MDE------   74 (170)
T ss_dssp             HHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGSSEEECC----SGG------
T ss_pred             HHHHHHcCCCCCCCEEEEECCcHHHHHHHHHhcccce-EEEeccchHHHHHHHHHHHhhcccccccc----ccc------
Confidence            34565533 4678999999999999999999999999 588888888876544 4443221111111    111      


Q ss_pred             hhcCCCccEEEEccCCh
Q 018075          246 NAMGSGIDVSFDCVGFD  262 (361)
Q Consensus       246 ~~~~~~~d~vld~~g~~  262 (361)
                       .....+|++++|+...
T Consensus        75 -~~~~~~dliIN~Tp~G   90 (170)
T d1nyta1          75 -LEGHEFDLIINATSSG   90 (170)
T ss_dssp             -GTTCCCSEEEECCSCG
T ss_pred             -ccccccceeecccccC
Confidence             1135799999988644

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=96.87  E-value=0.0035  Score=51.91  Aligned_cols=105  Identities=19%  Similarity=0.203  Sum_probs=62.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEE----eecCCCccchhHHHHHHHhhc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADET----AKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~----~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      +|+++||.| ++++|.+.+..+...|++.++..+..+ +.+.+++    .+-..+    .+...+..+..+.+..+.+..
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   82 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVE-NPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSC-CHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcc-cHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHc
Confidence            589999998 589999999988889996555544433 3332222    232222    222212223444444444433


Q ss_pred             CCCccEEEEccCChH-----------------HHHHHHHhhc-----CCCEEEEEccC
Q 018075          249 GSGIDVSFDCVGFDK-----------------TMSTALNATR-----PGGKVCLIGLA  284 (361)
Q Consensus       249 ~~~~d~vld~~g~~~-----------------~~~~~~~~l~-----~~G~~v~~g~~  284 (361)
                       +++|+++++.|...                 ..+.+++.|.     ++|+++.++..
T Consensus        83 -g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~  139 (254)
T d1sbya1          83 -KTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSV  139 (254)
T ss_dssp             -SCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCG
T ss_pred             -CCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEech
Confidence             47999999988551                 3344445552     46888887643

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.86  E-value=0.0023  Score=53.23  Aligned_cols=106  Identities=17%  Similarity=0.225  Sum_probs=69.8

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHH----HHHHHcCCCEE-eecC-CCccchhHHHHHHHhhcC
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRL----SIARNLGADET-AKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~----~~~~~lg~~~~-~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      -.|+++||.| ++++|.+.++.+...|+++++...++++..    +.+++.|.+.. +..+ .+.++..+.+.++.+.. 
T Consensus         4 L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~-   82 (259)
T d1ja9a_           4 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF-   82 (259)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH-
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc-
Confidence            4689999998 589999999999999995444455665543    33445565432 2211 23344445555544433 


Q ss_pred             CCccEEEEccCCh-------------------------HHHHHHHHhhcCCCEEEEEcc
Q 018075          250 SGIDVSFDCVGFD-------------------------KTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       250 ~~~d~vld~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g~  283 (361)
                      +++|+++++.|..                         ...+..++.|+.+|+++.+..
T Consensus        83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s  141 (259)
T d1ja9a_          83 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSS  141 (259)
T ss_dssp             SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred             CCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCccccccc
Confidence            4699999988765                         245667777888888887753

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.86  E-value=0.0086  Score=51.46  Aligned_cols=107  Identities=15%  Similarity=0.122  Sum_probs=69.7

Q ss_pred             HHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc-----------CCC--EEeecCCCc
Q 018075          168 VHACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL-----------GAD--ETAKVSTDI  234 (361)
Q Consensus       168 ~~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l-----------g~~--~~~~~~~~~  234 (361)
                      ...++..+++++++||-+|||. |..++++|+..+...+++++.+++..+.+++.           |..  .+.-..   
T Consensus       141 ~~~~~~~~l~~~~~vlD~GcG~-G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~---  216 (328)
T d1nw3a_         141 AQMIDEIKMTDDDLFVDLGSGV-GQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLER---  216 (328)
T ss_dssp             HHHHHHSCCCTTCEEEEETCTT-SHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEE---
T ss_pred             HHHHHHcCCCCCCEEEEcCCCC-CHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEE---
Confidence            3456778999999999999987 88899999999987899999999877666432           211  111111   


Q ss_pred             cchhHH-HHHHHhhcCCCccEEEEc-cC-Ch---HHHHHHHHhhcCCCEEEEEc
Q 018075          235 EDVDTD-VGKIQNAMGSGIDVSFDC-VG-FD---KTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       235 ~~~~~~-~~~~~~~~~~~~d~vld~-~g-~~---~~~~~~~~~l~~~G~~v~~g  282 (361)
                      .++.+. ..+.    -..+|+|+-. .. .+   ..+..+++.|+|||+++...
T Consensus       217 gd~~~~~~~~~----~~~advi~~~~~~f~~~~~~~l~e~~r~LKpGg~iv~~~  266 (328)
T d1nw3a_         217 GDFLSEEWRER----IANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSK  266 (328)
T ss_dssp             CCTTSHHHHHH----HHHCSEEEECCTTTCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             Ccccccccccc----cCcceEEEEcceecchHHHHHHHHHHHhCCCCcEEEEec
Confidence            121111 1110    0236788752 11 12   25667888899999999764

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.83  E-value=0.00089  Score=54.74  Aligned_cols=102  Identities=10%  Similarity=-0.048  Sum_probs=67.3

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCC-EEe------------ecCCC-----cc
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD-ETA------------KVSTD-----IE  235 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-~~~------------~~~~~-----~~  235 (361)
                      ....++.+||..|||. |..+..+|+ .|+ .|+++|.+++..+.+++.... ...            .....     ..
T Consensus        41 l~~~~~~rvLd~GCG~-G~~a~~LA~-~G~-~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  117 (229)
T d2bzga1          41 LKGKSGLRVFFPLCGK-AVEMKWFAD-RGH-SVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCC  117 (229)
T ss_dssp             HTTCCSCEEEETTCTT-CTHHHHHHH-TTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEES
T ss_pred             cCCCCCCEEEEeCCCC-cHHHHHHHh-CCC-cEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEc
Confidence            5678999999999987 888888887 699 799999999988877664321 100            00000     01


Q ss_pred             chhHHHHHHHhhcCCCccEEEEccCC--------hHHHHHHHHhhcCCCEEEEEc
Q 018075          236 DVDTDVGKIQNAMGSGIDVSFDCVGF--------DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       236 ~~~~~~~~~~~~~~~~~d~vld~~g~--------~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ++.    .+.......+|+|+++..-        ...+..+.+.|+|||+++...
T Consensus       118 d~~----~l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~LkpgG~~~l~~  168 (229)
T d2bzga1         118 SIF----DLPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKKFQYLLCV  168 (229)
T ss_dssp             CGG----GGGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             chh----hccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCcceEEEEE
Confidence            111    1111124579999986421        135678899999999987664

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=96.83  E-value=0.012  Score=49.04  Aligned_cols=83  Identities=25%  Similarity=0.350  Sum_probs=56.3

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HHHcCCC---EEeecC-CCccchhHHHHHHHhhcCC
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLGAD---ETAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~---~~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      -+|+++||.| ++++|.+.++.+...|+ .|+.+++++++.+. +++++..   ..+..+ .+.++..+.+.++.+.. +
T Consensus         4 L~gKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g   81 (268)
T d2bgka1           4 LQDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKH-G   81 (268)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence            3688999998 58999999999988999 68888888887654 4445421   112111 23344555555544333 4


Q ss_pred             CccEEEEccCC
Q 018075          251 GIDVSFDCVGF  261 (361)
Q Consensus       251 ~~d~vld~~g~  261 (361)
                      ++|+++++.|.
T Consensus        82 ~iD~lVnnAG~   92 (268)
T d2bgka1          82 KLDIMFGNVGV   92 (268)
T ss_dssp             CCCEEEECCCC
T ss_pred             Ccceecccccc
Confidence            79999998874

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.83  E-value=0.0035  Score=51.60  Aligned_cols=83  Identities=19%  Similarity=0.228  Sum_probs=58.0

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCCEE---eecCCCccchhHHHHHHHhhcCCC
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADET---AKVSTDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  251 (361)
                      -+|+++||.| ++++|.+.++.+...|+ .|+.+++++++.+ ++++++....   .|+ .+..+..+.++++.+.. ++
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv-~~~~~v~~~~~~~~~~~-g~   80 (244)
T d1nffa_           4 LTGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDV-TQPAQWKAAVDTAVTAF-GG   80 (244)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCT-TCHHHHHHHHHHHHHHH-SC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhCcceEEEeec-CCHHHHHHHHHHHHHHh-CC
Confidence            4688999998 58999999999999999 6888889888765 4455653221   222 23344555555554433 46


Q ss_pred             ccEEEEccCCh
Q 018075          252 IDVSFDCVGFD  262 (361)
Q Consensus       252 ~d~vld~~g~~  262 (361)
                      +|+++++.|..
T Consensus        81 idilinnAG~~   91 (244)
T d1nffa_          81 LHVLVNNAGIL   91 (244)
T ss_dssp             CCEEEECCCCC
T ss_pred             CeEEEECCccc
Confidence            99999998754

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.81  E-value=0.0014  Score=53.00  Aligned_cols=95  Identities=14%  Similarity=0.184  Sum_probs=63.7

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhhcCC
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (361)
                      .++++++||-+|||. |..+..+++ .|. .|+++|.+++..+.+++    .+...... ..+..+..        ....
T Consensus        34 ~l~~~~~ILDiGcG~-G~~~~~la~-~~~-~v~giD~S~~~i~~ak~~~~~~~~~~~~~-~~d~~~l~--------~~~~  101 (226)
T d1ve3a1          34 YMKKRGKVLDLACGV-GGFSFLLED-YGF-EVVGVDISEDMIRKAREYAKSRESNVEFI-VGDARKLS--------FEDK  101 (226)
T ss_dssp             SCCSCCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEE-ECCTTSCC--------SCTT
T ss_pred             hcCCCCEEEEECCCc-chhhhhHhh-hhc-ccccccccccchhhhhhhhcccccccccc-cccccccc--------ccCc
Confidence            357889999999987 888888887 477 79999999988877665    33222111 11111110        1235


Q ss_pred             CccEEEEccCC-----h---HHHHHHHHhhcCCCEEEEE
Q 018075          251 GIDVSFDCVGF-----D---KTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       251 ~~d~vld~~g~-----~---~~~~~~~~~l~~~G~~v~~  281 (361)
                      .+|+|+....-     .   ..++.+.+.|+|||++++.
T Consensus       102 ~fD~I~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~lii~  140 (226)
T d1ve3a1         102 TFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMY  140 (226)
T ss_dssp             CEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CceEEEEecchhhCChhHHHHHHHHHHHHcCcCcEEEEE
Confidence            79998874321     1   2577888999999998764

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.80  E-value=0.0047  Score=50.98  Aligned_cols=82  Identities=23%  Similarity=0.228  Sum_probs=57.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH-cCCCEEeecC-CCccchhHHHHHHHhhcCCCccE
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADETAKVS-TDIEDVDTDVGKIQNAMGSGIDV  254 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~  254 (361)
                      +|+++||.| ++++|.+.++.+...|+ .|+.+++++++.+.+.+ ++....+..+ ++..+..+.+.++.+.. +++|+
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~-g~iDi   82 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRF-GRLDC   82 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHH-SCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhc-CCCCE
Confidence            689999998 58999999999999999 68888999888765554 4432222221 23344444555444333 47999


Q ss_pred             EEEccCC
Q 018075          255 SFDCVGF  261 (361)
Q Consensus       255 vld~~g~  261 (361)
                      ++++.|.
T Consensus        83 lVnnAG~   89 (250)
T d1ydea1          83 VVNNAGH   89 (250)
T ss_dssp             EEECCCC
T ss_pred             EEecccc
Confidence            9998873

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=96.79  E-value=0.013  Score=48.11  Aligned_cols=82  Identities=22%  Similarity=0.236  Sum_probs=55.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChh--HHHHHHHcCCCEE---eecCCCccchhHHHHHHHhhcCCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ--RLSIARNLGADET---AKVSTDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~--~~~~~~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~~~  251 (361)
                      +|+.+||.| ++++|.+.++.+...|+ .|+.++++++  ..+.+++.|....   .|. ++..+....+.++.+.. ++
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv-s~~~~v~~~~~~~~~~~-G~   80 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDV-SQPGDVEAFGKQVISTF-GR   80 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCT-TCHHHHHHHHHHHHHHH-SC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHHHcCCcEEEEEeeC-CCHHHHHHHHHHHHHHc-CC
Confidence            578899998 58999999999999999 5777776543  3455666775432   122 23344445555444322 47


Q ss_pred             ccEEEEccCCh
Q 018075          252 IDVSFDCVGFD  262 (361)
Q Consensus       252 ~d~vld~~g~~  262 (361)
                      +|+++++.|..
T Consensus        81 iDilVnnAG~~   91 (247)
T d2ew8a1          81 CDILVNNAGIY   91 (247)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            99999998754

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.78  E-value=0.003  Score=51.91  Aligned_cols=80  Identities=20%  Similarity=0.201  Sum_probs=53.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      +|+++||.| ++++|.+.++.+...|+ .|+.+++++++.+ +.++++....+..+-  .+.. .+++..+. -+++|++
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv--~~~~-~v~~~~~~-~g~iDil   78 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGIEPVCVDL--GDWD-ATEKALGG-IGPVDLL   78 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCT--TCHH-HHHHHHTT-CCCCSEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeC--CCHH-HHHHHHHH-cCCCeEE
Confidence            689999998 58999999999999999 6888888887664 445554333222222  1221 23333221 2579999


Q ss_pred             EEccCCh
Q 018075          256 FDCVGFD  262 (361)
Q Consensus       256 ld~~g~~  262 (361)
                      +++.|..
T Consensus        79 VnnAg~~   85 (242)
T d1cyda_          79 VNNAALV   85 (242)
T ss_dssp             EECCCCC
T ss_pred             EECCccc
Confidence            9988743

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.77  E-value=0.0024  Score=52.68  Aligned_cols=81  Identities=21%  Similarity=0.292  Sum_probs=55.2

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      -+|+++||.| ++++|.+.++.+...|+ .|+.+++++++.+.+.+.........+....   +....... .-.++|++
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~G~-~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~---~~~~~~~~-~~~~id~l   78 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRVLDVTKK---KQIDQFAN-EVERLDVL   78 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCTTCH---HHHHHHHH-HCSCCSEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhccCCceeeeecccc---cccccccc-ccccceeE
Confidence            3688999998 68999999999999999 6888999988876665543333222222222   22332222 23579999


Q ss_pred             EEccCCh
Q 018075          256 FDCVGFD  262 (361)
Q Consensus       256 ld~~g~~  262 (361)
                      +++.|..
T Consensus        79 Vn~ag~~   85 (245)
T d2ag5a1          79 FNVAGFV   85 (245)
T ss_dssp             EECCCCC
T ss_pred             Eeccccc
Confidence            9988755

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=96.77  E-value=0.01  Score=48.89  Aligned_cols=83  Identities=17%  Similarity=0.189  Sum_probs=55.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcCCC---EEeecC-CCccchhHHHHHHHhhcCCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGAD---ETAKVS-TDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~  251 (361)
                      +|+++||.| ++++|.+.++.+...|+ .|+.+++++++.+.+ ++++..   ..+..+ .+..+..+.+.++.+.. ++
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-G~   82 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAF-GP   82 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH-SS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHh-CC
Confidence            688999998 68999999999999999 688888888876544 444421   112111 23334444555544433 47


Q ss_pred             ccEEEEccCCh
Q 018075          252 IDVSFDCVGFD  262 (361)
Q Consensus       252 ~d~vld~~g~~  262 (361)
                      +|+++++.|..
T Consensus        83 iDiLVnnAg~~   93 (251)
T d1zk4a1          83 VSTLVNNAGIA   93 (251)
T ss_dssp             CCEEEECCCCC
T ss_pred             ceEEEeccccc
Confidence            99999988754

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.75  E-value=0.0089  Score=49.88  Aligned_cols=105  Identities=16%  Similarity=0.245  Sum_probs=69.5

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCC-hhHHH----HHHHcCCCEEe-ecC-CCccchhHHHHHHHhhc
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVD-VQRLS----IARNLGADETA-KVS-TDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~-~~~~~----~~~~lg~~~~~-~~~-~~~~~~~~~~~~~~~~~  248 (361)
                      -+|+++||.| ++++|.+.++.+...|+ .|+.++++ ++..+    .+++.+.+... ..+ .+.++..+.+.++.+..
T Consensus        16 L~gK~~lITGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   94 (272)
T d1g0oa_          16 LEGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIF   94 (272)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHh
Confidence            3589999998 59999999999999999 56666554 44332    33455543322 111 23345555555554433


Q ss_pred             CCCccEEEEccCCh-------------------------HHHHHHHHhhcCCCEEEEEcc
Q 018075          249 GSGIDVSFDCVGFD-------------------------KTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       249 ~~~~d~vld~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g~  283 (361)
                       +++|+++++.+..                         ...+...+.|...|+.+.++.
T Consensus        95 -g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s  153 (272)
T d1g0oa_          95 -GKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGS  153 (272)
T ss_dssp             -SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECC
T ss_pred             -CCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccc
Confidence             4799999988755                         145667778888999988864

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.74  E-value=0.0036  Score=52.51  Aligned_cols=104  Identities=22%  Similarity=0.400  Sum_probs=64.9

Q ss_pred             CCCEE-EEEC-CCHHHHHHHH-HHHHcCCCEEEEEeCChhHHHHH-HHc---CCC-EEeecC-CCccchhHHHHHHHhhc
Q 018075          178 PETNV-MIMG-SGPIGLVTLL-AARAFGAPRIIITDVDVQRLSIA-RNL---GAD-ETAKVS-TDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       178 ~g~~v-lI~G-~g~~G~~ai~-la~~~g~~~vv~v~~~~~~~~~~-~~l---g~~-~~~~~~-~~~~~~~~~~~~~~~~~  248 (361)
                      .|.+| ||.| ++++|.+.++ |++.-|+ .|+.+++++++.+.+ +++   +.. ..+..+ ++..+..+...++.+..
T Consensus         1 ~g~rVAlVTGas~GIG~a~A~~la~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~   79 (275)
T d1wmaa1           1 SGIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY   79 (275)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCeEEEECCCCCHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhc
Confidence            36788 5568 5899998876 5666688 788888888876433 333   322 222211 23334444444444333


Q ss_pred             CCCccEEEEccCCh-------------------------HHHHHHHHhhcCCCEEEEEcc
Q 018075          249 GSGIDVSFDCVGFD-------------------------KTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       249 ~~~~d~vld~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g~  283 (361)
                       +++|+++++.|..                         ...+.+++.|++.|+++.++.
T Consensus        80 -g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS  138 (275)
T d1wmaa1          80 -GGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSS  138 (275)
T ss_dssp             -SSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred             -CCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc
Confidence             4799999998753                         134445667788899988764

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=96.74  E-value=0.003  Score=52.39  Aligned_cols=82  Identities=23%  Similarity=0.321  Sum_probs=58.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCCEE---eecCCCccchhHHHHHHHhhcCCCc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADET---AKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      +|+++||.| ++++|.+.++.+...|+ .|+.+++++++.+ .+++++....   .|+ ++.++..+.+.++.+.. +++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dv-t~~~~v~~~~~~~~~~~-g~i   80 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGA-RVAIADINLEAARATAAEIGPAACAIALDV-TDQASIDRCVAELLDRW-GSI   80 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTE-EEEEEESCHHHHHHHHHHHCTTEEEEECCT-TCHHHHHHHHHHHHHHH-SCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEeeC-CCHHHHHHHHHHHHHHh-CCc
Confidence            578899998 58999999999999999 6888888887654 5666775432   232 23344455555544333 479


Q ss_pred             cEEEEccCCh
Q 018075          253 DVSFDCVGFD  262 (361)
Q Consensus       253 d~vld~~g~~  262 (361)
                      |+++++.|..
T Consensus        81 DilVnnAg~~   90 (256)
T d1k2wa_          81 DILVNNAALF   90 (256)
T ss_dssp             CEEEECCCCC
T ss_pred             cEEEeecccc
Confidence            9999998744

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.74  E-value=0.0036  Score=51.22  Aligned_cols=101  Identities=20%  Similarity=0.206  Sum_probs=61.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCC-ccchhHHHHHHHh-hcCCCccE
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTD-IEDVDTDVGKIQN-AMGSGIDV  254 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~d~  254 (361)
                      +|++|||.| ++++|.+.++.+...|+ .|+.++.++....     ........... ..+.......+.. ....++|+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~-~V~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~   74 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEA-----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA   74 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTS-----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCccccc-----cccceeecccCcHHHHHHHHHHHHHHhCCCCceE
Confidence            588999998 59999999999999999 6777776553221     11111111111 1111111222222 13457999


Q ss_pred             EEEccCCh--------------------------HHHHHHHHhhcCCCEEEEEccC
Q 018075          255 SFDCVGFD--------------------------KTMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       255 vld~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      ++++.|.-                          ...+.+.+.|+++|+++.++..
T Consensus        75 lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~  130 (236)
T d1dhra_          75 ILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAK  130 (236)
T ss_dssp             EEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred             EEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccH
Confidence            99988742                          1333455677899999998754

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.74  E-value=0.012  Score=48.46  Aligned_cols=105  Identities=11%  Similarity=0.144  Sum_probs=67.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH----HHcCCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      +++.+||.| ++++|.+.++.+...|+ .|+.+++++++.+.+    ++.|... .+..+ ++..+..+.+.++.+. -+
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~-~g   86 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTE-HK   86 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH-CS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh-cC
Confidence            577888998 58999999998888999 688888888765433    3344332 11111 2334455555554432 35


Q ss_pred             CccEEEEccCCh----------H---------------HHHHHHHhh--cCCCEEEEEccC
Q 018075          251 GIDVSFDCVGFD----------K---------------TMSTALNAT--RPGGKVCLIGLA  284 (361)
Q Consensus       251 ~~d~vld~~g~~----------~---------------~~~~~~~~l--~~~G~~v~~g~~  284 (361)
                      ++|+++++.|..          +               ..+.+++.|  ..+|++|.++..
T Consensus        87 ~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~  147 (251)
T d2c07a1          87 NVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSI  147 (251)
T ss_dssp             CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCT
T ss_pred             CceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCH
Confidence            899999988754          1               233344444  467999988743

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.73  E-value=0.028  Score=40.97  Aligned_cols=88  Identities=16%  Similarity=0.137  Sum_probs=59.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH-cCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEcc
Q 018075          181 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV  259 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  259 (361)
                      +|+|.|+|.+|...++.+...|. .|++++.++++.+.+.+ ++...+ .-+..  + .+.+++   .+-..+|.++.+.
T Consensus         2 ~IvI~G~G~~G~~la~~L~~~g~-~v~vid~d~~~~~~~~~~~~~~vi-~Gd~~--~-~~~l~~---~~i~~a~~vv~~t   73 (132)
T d1lssa_           2 YIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDALVI-NGDCT--K-IKTLED---AGIEDADMYIAVT   73 (132)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSEEE-ESCTT--S-HHHHHH---TTTTTCSEEEECC
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-CcceecCChhhhhhhhhhhhhhhc-cCccc--c-hhhhhh---cChhhhhhhcccC
Confidence            68999999999999999999998 69999999998887654 565433 22221  1 122222   2346899999988


Q ss_pred             CChHH---HHHHHHhhcCCC
Q 018075          260 GFDKT---MSTALNATRPGG  276 (361)
Q Consensus       260 g~~~~---~~~~~~~l~~~G  276 (361)
                      +.++.   .....+.+.+.-
T Consensus        74 ~~d~~N~~~~~~~k~~~~~~   93 (132)
T d1lssa_          74 GKEEVNLMSSLLAKSYGINK   93 (132)
T ss_dssp             SCHHHHHHHHHHHHHTTCCC
T ss_pred             CcHHHHHHHHHHHHHcCCce
Confidence            87631   122334555553

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.72  E-value=0.0098  Score=45.44  Aligned_cols=85  Identities=18%  Similarity=0.152  Sum_probs=59.9

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCC-EEeecCCCccchhHHHHHHHhhcCCCccEEEEcc
Q 018075          181 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD-ETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV  259 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  259 (361)
                      +|.|+|+|.+|...+..++..|. .|++.++++++.+.+++++.. ...+      +. +.        -...|+||-++
T Consensus         2 kI~iIG~G~mG~~lA~~l~~~g~-~V~~~d~~~~~~~~a~~~~~~~~~~~------~~-~~--------~~~~DiIilav   65 (165)
T d2f1ka2           2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQLVDEAGQ------DL-SL--------LQTAKIIFLCT   65 (165)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTSCSEEES------CG-GG--------GTTCSEEEECS
T ss_pred             EEEEEeecHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHhhccceeee------ec-cc--------ccccccccccC
Confidence            68899999999988888888898 688899999999999998853 2211      11 11        14689999998


Q ss_pred             CChHHHHHHH----HhhcCCCEEEEEc
Q 018075          260 GFDKTMSTAL----NATRPGGKVCLIG  282 (361)
Q Consensus       260 g~~~~~~~~~----~~l~~~G~~v~~g  282 (361)
                      ... ..+..+    +.+.++..++.++
T Consensus        66 p~~-~~~~vl~~l~~~l~~~~iv~~~~   91 (165)
T d2f1ka2          66 PIQ-LILPTLEKLIPHLSPTAIVTDVA   91 (165)
T ss_dssp             CHH-HHHHHHHHHGGGSCTTCEEEECC
T ss_pred             cHh-hhhhhhhhhhhhcccccceeecc
Confidence            744 444444    4445566555554

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.70  E-value=0.014  Score=49.49  Aligned_cols=103  Identities=18%  Similarity=0.264  Sum_probs=65.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCC---------hhHH-HHHHH---cCCCEEeecCCCccchhHHHHH
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVD---------VQRL-SIARN---LGADETAKVSTDIEDVDTDVGK  243 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~---------~~~~-~~~~~---lg~~~~~~~~~~~~~~~~~~~~  243 (361)
                      +|+++||.| ++++|.+.++.+...|+ .|+..+.+         ++.. +..++   .+.....+. .+..+..+.+.+
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga-~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~v~~   83 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANY-DSVEAGEKLVKT   83 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEEC-CCGGGHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchhhhhhhhHHHHHHHHHHHhhccccccccc-chHHHHHHHHHH
Confidence            588899998 58999999999999999 57776543         2222 22333   333333443 233444555555


Q ss_pred             HHhhcCCCccEEEEccCCh-------------------------HHHHHHHHhh--cCCCEEEEEcc
Q 018075          244 IQNAMGSGIDVSFDCVGFD-------------------------KTMSTALNAT--RPGGKVCLIGL  283 (361)
Q Consensus       244 ~~~~~~~~~d~vld~~g~~-------------------------~~~~~~~~~l--~~~G~~v~~g~  283 (361)
                      ..+. -+++|+++++.|..                         ...+.+++.|  ..+|++|.++.
T Consensus        84 ~~~~-~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS  149 (302)
T d1gz6a_          84 ALDT-FGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTAS  149 (302)
T ss_dssp             HHHH-TSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             HHHH-cCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCC
Confidence            4432 35799999998754                         1344455555  35699998874

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.69  E-value=0.0026  Score=52.73  Aligned_cols=78  Identities=12%  Similarity=0.089  Sum_probs=52.0

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCE-EeecCCCccchhHHHHHHHhhcCCCccEEEEc
Q 018075          181 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE-TAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  258 (361)
Q Consensus       181 ~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  258 (361)
                      ++||.| ++++|.+.+..+...|+ .|+.++++.++.+.+++++... ..+. .+..+..+.+.++.+.. +++|+++++
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~dv-~~~~~~~~~~~~~~~~~-G~iDiLVnN   78 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKP-MSEQEPAELIEAVTSAY-GQVDVLVSN   78 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEE-CCCCSHHHHHHHHHHHH-SCCCEEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhhhCcEEEecc-CCHHHHHHHHHHHHHHc-CCCCEEEEC
Confidence            678998 58999999998888999 6888888777766665543111 1121 23345555555554433 479999987


Q ss_pred             cCC
Q 018075          259 VGF  261 (361)
Q Consensus       259 ~g~  261 (361)
                      .|.
T Consensus        79 Ag~   81 (252)
T d1zmta1          79 DIF   81 (252)
T ss_dssp             CCC
T ss_pred             CcC
Confidence            653

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=96.69  E-value=0.0065  Score=50.22  Aligned_cols=82  Identities=18%  Similarity=0.326  Sum_probs=52.7

Q ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHcCCCEEEEEeCChhHHHHHH----HcCCCEEeecC-CCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMGS-G--PIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGADETAKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G~-g--~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      +|+++||.|+ |  ++|.+.++.+...|+ .|+.++++++..+.++    ..+....+..+ .+.++..+.+.++.+.. 
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-   84 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF-   84 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhc-
Confidence            6899999995 5  799999998888999 5777777765444333    33433333222 23334444444444332 


Q ss_pred             CCccEEEEccCC
Q 018075          250 SGIDVSFDCVGF  261 (361)
Q Consensus       250 ~~~d~vld~~g~  261 (361)
                      +++|+++++.|.
T Consensus        85 g~iDilVnnag~   96 (256)
T d1ulua_          85 GGLDYLVHAIAF   96 (256)
T ss_dssp             SSEEEEEECCCC
T ss_pred             CCceEEEecccc
Confidence            479999998864

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=96.65  E-value=0.021  Score=46.53  Aligned_cols=106  Identities=18%  Similarity=0.231  Sum_probs=71.7

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCCEE-e--ecCCCccchhHHHHHHHhhcCCC
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADET-A--KVSTDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~  251 (361)
                      -+|+++||.| ++++|.+.++-+...|+ .|+.+.++.++.+ ..++++.+.. +  |. ++.++..+...++.+.. ++
T Consensus         3 l~gK~alItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl-s~~~~i~~~~~~i~~~~-g~   79 (241)
T d2a4ka1           3 LSGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADV-SDPKAVEAVFAEALEEF-GR   79 (241)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCT-TSHHHHHHHHHHHHHHH-SC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCceEEEEecC-CCHHHHHHHHHHHHHHh-CC
Confidence            3689999998 58999999999999999 6788888887654 5566775432 2  22 23344444444444322 47


Q ss_pred             ccEEEEccCCh-------------------------HHHHHHHHhhcCCCEEEEEccCC
Q 018075          252 IDVSFDCVGFD-------------------------KTMSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       252 ~d~vld~~g~~-------------------------~~~~~~~~~l~~~G~~v~~g~~~  285 (361)
                      +|+.+++.+..                         ...+..++.+..++.++.++...
T Consensus        80 iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a  138 (241)
T d2a4ka1          80 LHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVA  138 (241)
T ss_dssp             CCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCT
T ss_pred             ccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccc
Confidence            99999987644                         13444566777888877766544

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=96.63  E-value=0.014  Score=48.26  Aligned_cols=82  Identities=18%  Similarity=0.236  Sum_probs=53.1

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChh-HH----HHHHHcCCCEE---eecCCCccchhHHHHHHHhhc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ-RL----SIARNLGADET---AKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~-~~----~~~~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      +|+++||.| ++++|.+.++.+...|+ .|+.++++.+ ..    +.+++.|.+..   .|+ ++.++..+.+.++.+..
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv-t~~~~v~~~~~~~~~~~   83 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDV-TVESDVINLVQSAIKEF   83 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCT-TSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccC-CCHHHHHHHHHHHHHHh
Confidence            678899998 58999999998888999 5777776543 32    33445554322   122 23344444455444333


Q ss_pred             CCCccEEEEccCCh
Q 018075          249 GSGIDVSFDCVGFD  262 (361)
Q Consensus       249 ~~~~d~vld~~g~~  262 (361)
                       +++|+++++.|..
T Consensus        84 -G~iDiLVnnAG~~   96 (261)
T d1geea_          84 -GKLDVMINNAGLE   96 (261)
T ss_dssp             -SCCCEEEECCCCC
T ss_pred             -CCCCEeeccceec
Confidence             4799999988754

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.60  E-value=0.0021  Score=52.76  Aligned_cols=78  Identities=19%  Similarity=0.236  Sum_probs=52.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  256 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  256 (361)
                      +|+++||.| ++++|.+.++.+...|+ .|+.+++++++.+.+..    ...+. .+..+..+.+.++.+.. +++|+++
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~----~~~Dv-~~~~~v~~~~~~~~~~~-g~iDiLV   78 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKGLFG----VEVDV-TDSDAVDRAFTAVEEHQ-GPVEVLV   78 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTTSEE----EECCT-TCHHHHHHHHHHHHHHH-SSCSEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCcchhcCceE----EEEec-CCHHHHHHHHHHHHHhc-CCceEEE
Confidence            688999998 58999999999999999 68888887654432111    11222 23344445555554432 4799999


Q ss_pred             EccCCh
Q 018075          257 DCVGFD  262 (361)
Q Consensus       257 d~~g~~  262 (361)
                      ++.|..
T Consensus        79 nnAG~~   84 (237)
T d1uzma1          79 SNAGLS   84 (237)
T ss_dssp             EECSCC
T ss_pred             eeeccc
Confidence            988754

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.57  E-value=0.017  Score=44.67  Aligned_cols=96  Identities=18%  Similarity=0.153  Sum_probs=61.2

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCC----CccchhHHHHHHHhhcCCCccEE
Q 018075          180 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVST----DIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       180 ~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      .++.|+|+|.+|.+.+..+...|. .|...++++++.+.+++.+.........    ..........+.    -..+|++
T Consensus         2 k~iaIiGaG~~G~~~A~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~----~~~aD~i   76 (184)
T d1bg6a2           2 KTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLA----VKDADVI   76 (184)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHH----HTTCSEE
T ss_pred             CEEEEECccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhH----hcCCCEE
Confidence            689999999999999999999998 6888899999988887765322110000    000000111121    1469999


Q ss_pred             EEccCChH---HHHHHHHhhcCCCEEEE
Q 018075          256 FDCVGFDK---TMSTALNATRPGGKVCL  280 (361)
Q Consensus       256 ld~~g~~~---~~~~~~~~l~~~G~~v~  280 (361)
                      |-++....   .++++.+.+.++..++.
T Consensus        77 ii~v~~~~~~~~~~~i~~~l~~~~~iv~  104 (184)
T d1bg6a2          77 LIVVPAIHHASIAANIASYISEGQLIIL  104 (184)
T ss_dssp             EECSCGGGHHHHHHHHGGGCCTTCEEEE
T ss_pred             EEEEchhHHHHHHHHhhhccCCCCEEEE
Confidence            99998662   33334455666665543

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.56  E-value=0.0039  Score=53.62  Aligned_cols=103  Identities=20%  Similarity=0.190  Sum_probs=65.4

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhhcCC
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (361)
                      .+++|++||=.++|. |..++.+|+ .|+..|++++.+++..+.+++    .|...-+..  ...+..+.+..+.. .+.
T Consensus       142 ~~~~g~~VLDl~~g~-G~~si~~a~-~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~--~~~d~~~~~~~~~~-~~~  216 (324)
T d2as0a2         142 WVQPGDRVLDVFTYT-GGFAIHAAI-AGADEVIGIDKSPRAIETAKENAKLNGVEDRMKF--IVGSAFEEMEKLQK-KGE  216 (324)
T ss_dssp             GCCTTCEEEETTCTT-THHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEE--EESCHHHHHHHHHH-TTC
T ss_pred             hcCCCCeeecccCcc-cchhhhhhh-cCCcEEEeecCCHHHHHHHHHHHHHcCCCcccee--eechhhhhhHHHHh-ccC
Confidence            368999999886543 334445554 477789999999998877755    444321111  11344444444332 356


Q ss_pred             CccEEEEccCC---------------hHHHHHHHHhhcCCCEEEEEc
Q 018075          251 GIDVSFDCVGF---------------DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       251 ~~d~vld~~g~---------------~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      .||+|+-....               ...+..+.+.|+|||.++.+.
T Consensus       217 ~fD~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s  263 (324)
T d2as0a2         217 KFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCS  263 (324)
T ss_dssp             CEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             CCCchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence            89999863321               125666788999999998875

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=96.50  E-value=0.011  Score=45.95  Aligned_cols=125  Identities=11%  Similarity=0.110  Sum_probs=71.6

Q ss_pred             HHHHHhcCC-CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHH----HHHHcC----CC-EEeecCCCccch
Q 018075          168 VHACRRANV-GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS----IARNLG----AD-ETAKVSTDIEDV  237 (361)
Q Consensus       168 ~~~l~~~~~-~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~----~~~~lg----~~-~~~~~~~~~~~~  237 (361)
                      ..+++..++ -++.+|||+|+|+.+.+++..+...|+..++.+.+++++.+    ++++++    .. ...++    .+.
T Consensus         6 ~~~l~~~~~~l~~k~vlIlGaGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~~   81 (182)
T d1vi2a1           6 IRAIKESGFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDL----ADQ   81 (182)
T ss_dssp             HHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEET----TCH
T ss_pred             HHHHHHcCCCcCCCEEEEECCcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeec----ccc
Confidence            345655333 36789999999999999999999999988888888766543    333333    11 11121    122


Q ss_pred             hHHHHHHHhhcCCCccEEEEccCChH------HHHHHHHhhcCCCEEEEEccCCCCcceechHhhhcCcEE
Q 018075          238 DTDVGKIQNAMGSGIDVSFDCVGFDK------TMSTALNATRPGGKVCLIGLAKTEMTVALTPAAAREVDV  302 (361)
Q Consensus       238 ~~~~~~~~~~~~~~~d~vld~~g~~~------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i  302 (361)
                      ......+     ..+|++++|....-      .+..-...+.++..++.+-..... +..+...-.++...
T Consensus        82 ~~~~~~~-----~~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~Y~p~~-T~ll~~a~~~g~~~  146 (182)
T d1vi2a1          82 QAFAEAL-----ASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHM-TKLLQQAQQAGCKT  146 (182)
T ss_dssp             HHHHHHH-----HTCSEEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEECCCSSSS-CHHHHHHHTTTCEE
T ss_pred             cchhhhh-----cccceeccccCCccccccchhhhhHHHhhhcchhhHHhhcCccc-cHHHHHHHHCcCeE
Confidence            2222111     46899999976320      001113456777777776544333 22333333344443

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=96.50  E-value=0.011  Score=49.90  Aligned_cols=83  Identities=14%  Similarity=0.220  Sum_probs=53.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-----HHHHcCCCE-EeecCC-CccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-----IARNLGADE-TAKVST-DIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-----~~~~lg~~~-~~~~~~-~~~~~~~~~~~~~~~~~  249 (361)
                      +|+++||.| ++++|.+.+..+...|+ .|+.+++++++.+     +.++.|... .+..+- +..+.......+.. ..
T Consensus        24 ~gK~alITGas~GIG~aiA~~la~~Ga-~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~-~~  101 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIK-VA  101 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH-HT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhh-hc
Confidence            679999998 69999999999999999 6888888887643     223334332 222222 22233333333322 35


Q ss_pred             CCccEEEEccCCh
Q 018075          250 SGIDVSFDCVGFD  262 (361)
Q Consensus       250 ~~~d~vld~~g~~  262 (361)
                      .++|+++++.|..
T Consensus       102 g~iDilvnnAg~~  114 (294)
T d1w6ua_         102 GHPNIVINNAAGN  114 (294)
T ss_dssp             CSCSEEEECCCCC
T ss_pred             cccchhhhhhhhc
Confidence            6899999998754

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.49  E-value=0.021  Score=43.64  Aligned_cols=93  Identities=20%  Similarity=0.156  Sum_probs=65.8

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCC-EEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEcc
Q 018075          181 NVMIMGSGPIGLVTLLAARAFGAP-RIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV  259 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~g~~-~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  259 (361)
                      +|+|+|+|.+|...+.-++..|.. .|++.+.+++..+.+++.+......  .   +....       .....|+|+-|+
T Consensus         3 ~I~IIG~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~--~---~~~~~-------~~~~~dlIila~   70 (171)
T d2g5ca2           3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGT--T---SIAKV-------EDFSPDFVMLSS   70 (171)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEE--S---CGGGG-------GGTCCSEEEECS
T ss_pred             EEEEEccCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhh--h---hhhhh-------hccccccccccC
Confidence            689999999999999888888853 6899999999999999998533221  1   11000       124689999988


Q ss_pred             CChH---HHHHHHHhhcCCCEEEEEccCC
Q 018075          260 GFDK---TMSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       260 g~~~---~~~~~~~~l~~~G~~v~~g~~~  285 (361)
                      ....   .+..+.+.+.++..++.++...
T Consensus        71 p~~~~~~vl~~l~~~~~~~~ii~d~~s~k   99 (171)
T d2g5ca2          71 PVRTFREIAKKLSYILSEDATVTDQGSVK   99 (171)
T ss_dssp             CHHHHHHHHHHHHHHSCTTCEEEECCSCC
T ss_pred             Cchhhhhhhhhhhcccccccccccccccc
Confidence            8542   3445566777777777766443

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.41  E-value=0.0057  Score=49.88  Aligned_cols=100  Identities=19%  Similarity=0.255  Sum_probs=59.9

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccc-hhHHHHHHHh-hcCCCccEE
Q 018075          179 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIED-VDTDVGKIQN-AMGSGIDVS  255 (361)
Q Consensus       179 g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~d~v  255 (361)
                      +.+|||.| ++++|.+.++.+...|+ .|+.++++++...     .....+..+....+ .......+.. ....++|++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~-~V~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~l   75 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQA-----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   75 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTS-----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCchhcc-----cccceeccccCchhHHHHHHHHHHHHhcCCCeeEE
Confidence            35799998 59999999999999999 6888887764321     11111111111111 1111111111 134679999


Q ss_pred             EEccCCh--------------------------HHHHHHHHhhcCCCEEEEEccC
Q 018075          256 FDCVGFD--------------------------KTMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       256 ld~~g~~--------------------------~~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      +++.|..                          ...+..++.|+++|+++.++..
T Consensus        76 innAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~  130 (235)
T d1ooea_          76 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAA  130 (235)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred             EECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccH
Confidence            9998742                          1234455677889999998743

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.39  E-value=0.0019  Score=53.17  Aligned_cols=95  Identities=22%  Similarity=0.261  Sum_probs=65.6

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc----CCC-EEeecCCCccchhHHHHHHHh
Q 018075          172 RRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GAD-ETAKVSTDIEDVDTDVGKIQN  246 (361)
Q Consensus       172 ~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~-~~~~~~~~~~~~~~~~~~~~~  246 (361)
                      .....+++.+||-+|||. |..+..+++ .|+ .|++++.+++-.+.+++.    +.. ..+.  .+-.+       +. 
T Consensus        35 ~~~~~~~~~~iLDiGcGt-G~~~~~l~~-~~~-~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~--~d~~~-------l~-  101 (251)
T d1wzna1          35 KEDAKREVRRVLDLACGT-GIPTLELAE-RGY-EVVGLDLHEEMLRVARRKAKERNLKIEFLQ--GDVLE-------IA-  101 (251)
T ss_dssp             HHTCSSCCCEEEEETCTT-CHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEE--SCGGG-------CC-
T ss_pred             HHhcCCCCCEEEEeCCCC-Cccchhhcc-cce-EEEEEeeccccccccccccccccccchhee--hhhhh-------cc-
Confidence            445667888999999987 888888887 577 799999999887777653    322 1111  11111       11 


Q ss_pred             hcCCCccEEEEccCCh---------HHHHHHHHhhcCCCEEEE
Q 018075          247 AMGSGIDVSFDCVGFD---------KTMSTALNATRPGGKVCL  280 (361)
Q Consensus       247 ~~~~~~d~vld~~g~~---------~~~~~~~~~l~~~G~~v~  280 (361)
                       .+..||+|+...+.-         ..++.+.++|+|||+++.
T Consensus       102 -~~~~fD~I~~~~~~~~~~~~~~~~~~L~~~~~~LkpgG~lii  143 (251)
T d1wzna1         102 -FKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFIT  143 (251)
T ss_dssp             -CCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             -cccccchHhhhhhhhhcCChHHHHHHHHHHHHHcCCCcEEEE
Confidence             145799998754321         367788899999999976

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=96.36  E-value=0.011  Score=49.03  Aligned_cols=104  Identities=22%  Similarity=0.263  Sum_probs=65.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCC-hhHHHHH-----HHcCCCEE---eecCCCccchhHHHHHHHhh
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVD-VQRLSIA-----RNLGADET---AKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~-~~~~~~~-----~~lg~~~~---~~~~~~~~~~~~~~~~~~~~  247 (361)
                      +|+++||.| ++++|.+.++.+...|+ .|+.++++ +++.+.+     ++.|....   .|+ .+.++..+.+.++.+.
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv-~~~~~v~~~~~~~~~~   80 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADL-SKGEAVRGLVDNAVRQ   80 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCT-TSHHHHHHHHHHHHHH
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCC-CCHHHHHHHHHHHHHH
Confidence            688899998 58999999998889999 67777765 3433322     23343322   122 2334455555554433


Q ss_pred             cCCCccEEEEccCCh----------H---------------HHHHHHHhhc--CCCEEEEEccC
Q 018075          248 MGSGIDVSFDCVGFD----------K---------------TMSTALNATR--PGGKVCLIGLA  284 (361)
Q Consensus       248 ~~~~~d~vld~~g~~----------~---------------~~~~~~~~l~--~~G~~v~~g~~  284 (361)
                      . +++|+++++.|..          +               ..+..++.|.  .+|+++.++..
T Consensus        81 ~-G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~  143 (260)
T d1x1ta1          81 M-GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASA  143 (260)
T ss_dssp             H-SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG
T ss_pred             h-CCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccc
Confidence            3 4799999998754          1               3334445553  46899988643

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.32  E-value=0.0046  Score=51.02  Aligned_cols=83  Identities=20%  Similarity=0.243  Sum_probs=55.0

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCC-EEEEEeCChhHHHHHHHcCCCE--EeecC-CCccchhHHHHHHHhh-cCCCc
Q 018075          179 ETNVMIMG-SGPIGLVTLLAARAFGAP-RIIITDVDVQRLSIARNLGADE--TAKVS-TDIEDVDTDVGKIQNA-MGSGI  252 (361)
Q Consensus       179 g~~vlI~G-~g~~G~~ai~la~~~g~~-~vv~v~~~~~~~~~~~~lg~~~--~~~~~-~~~~~~~~~~~~~~~~-~~~~~  252 (361)
                      ..+|||.| ++++|.+.++.+...|+. .|+.+.++.++.+.+++.....  .+..+ ++..+..+...++.+. +..++
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~i   82 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL   82 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCe
Confidence            37889998 589999999887778864 5777888888877776654222  22221 2333444445544432 23469


Q ss_pred             cEEEEccCC
Q 018075          253 DVSFDCVGF  261 (361)
Q Consensus       253 d~vld~~g~  261 (361)
                      |+++++.|.
T Consensus        83 dilinnAG~   91 (250)
T d1yo6a1          83 SLLINNAGV   91 (250)
T ss_dssp             CEEEECCCC
T ss_pred             EEEEEcCcc
Confidence            999999884

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=96.28  E-value=0.009  Score=43.86  Aligned_cols=92  Identities=11%  Similarity=0.178  Sum_probs=62.2

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccC
Q 018075          181 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG  260 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  260 (361)
                      +++|.|.|.+|..+++.+...|. .|++++.++++.+.+++.+...++ .+....+   .+.+.   +-..+|.++-+.+
T Consensus         2 ~~iIiG~G~~G~~la~~L~~~g~-~vvvid~d~~~~~~~~~~~~~~~~-gd~~~~~---~l~~a---~i~~a~~vi~~~~   73 (134)
T d2hmva1           2 QFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASYATHAVI-ANATEEN---ELLSL---GIRNFEYVIVAIG   73 (134)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHHTTTTCSEEEE-CCTTCTT---HHHHH---TGGGCSEEEECCC
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-eEEEecCcHHHHHHHHHhCCccee-eecccch---hhhcc---CCccccEEEEEcC
Confidence            57888999999999999999999 589999999999988887765433 2222222   23222   2356899888887


Q ss_pred             ChHHHH---HHHHhhcCCCEEEE
Q 018075          261 FDKTMS---TALNATRPGGKVCL  280 (361)
Q Consensus       261 ~~~~~~---~~~~~l~~~G~~v~  280 (361)
                      ......   .....+.+..+++.
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~iia   96 (134)
T d2hmva1          74 ANIQASTLTTLLLKELDIPNIWV   96 (134)
T ss_dssp             SCHHHHHHHHHHHHHTTCSEEEE
T ss_pred             chHHhHHHHHHHHHHcCCCcEEe
Confidence            552222   23334455566554

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.28  E-value=0.015  Score=47.18  Aligned_cols=73  Identities=19%  Similarity=0.206  Sum_probs=50.3

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEe-ecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETA-KVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      +|+++||.| ++++|.+.++.+...|+ .|+.+++++++.   ++.+..... ++.   ........+     -+++|++
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga-~V~~~~r~~~~l---~~~~~~~~~~Dv~---~~~~~~~~~-----~g~iD~l   70 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEELL---KRSGHRYVVCDLR---KDLDLLFEK-----VKEVDIL   70 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHH---HHTCSEEEECCTT---TCHHHHHHH-----SCCCSEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHH---HhcCCcEEEcchH---HHHHHHHHH-----hCCCcEE
Confidence            578999998 58999999999999999 688888887554   455544322 221   122222222     2479999


Q ss_pred             EEccCCh
Q 018075          256 FDCVGFD  262 (361)
Q Consensus       256 ld~~g~~  262 (361)
                      +++.|..
T Consensus        71 VnnAG~~   77 (234)
T d1o5ia_          71 VLNAGGP   77 (234)
T ss_dssp             EECCCCC
T ss_pred             Eeccccc
Confidence            9998754

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=96.27  E-value=0.025  Score=43.31  Aligned_cols=96  Identities=13%  Similarity=0.117  Sum_probs=63.9

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH-cCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          179 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN-LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       179 g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~-lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      +.+|||+|+|-+|..+++.+...|. .|++++++.++.+.+.+ ++...... ... ... ......    -...|.++.
T Consensus         2 ~K~IliiGaG~~G~~~a~~L~~~g~-~V~v~dr~~~~a~~l~~~~~~~~~~~-~~~-~~~-~~~~~~----i~~~~~~i~   73 (182)
T d1e5qa1           2 TKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQHSTPIS-LDV-NDD-AALDAE----VAKHDLVIS   73 (182)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESCHHHHHHHHTTCTTEEEEE-CCT-TCH-HHHHHH----HTTSSEEEE
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECChHHHHHHHhccccccccc-ccc-cch-hhhHhh----hhccceeEe
Confidence            5789999999999999998888899 68999999998876655 44332222 111 111 111111    146788888


Q ss_pred             ccCChHHHHHHHHhhcCCCEEEEEc
Q 018075          258 CVGFDKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       258 ~~g~~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      +............++..+..++...
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~   98 (182)
T d1e5qa1          74 LIPYTFHATVIKSAIRQKKHVVTTS   98 (182)
T ss_dssp             CSCGGGHHHHHHHHHHHTCEEECSS
T ss_pred             eccchhhhHHHHHHHhhccceeecc
Confidence            8776655555666667777666554

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.24  E-value=0.01  Score=49.02  Aligned_cols=83  Identities=14%  Similarity=0.278  Sum_probs=55.2

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH----HHHcCCCE-EeecC-CCccchhHHHHHHHhhcCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI----ARNLGADE-TAKVS-TDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~----~~~lg~~~-~~~~~-~~~~~~~~~~~~~~~~~~~  250 (361)
                      +|+++||.| ++++|.+.++.+...|+ .|+.+++++++.+.    +++.|... .+..+ ++..+..+.+.++.+.. +
T Consensus        10 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~-g   87 (255)
T d1fmca_          10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL-G   87 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHc-C
Confidence            688999998 58999999999999999 68888888876543    33445332 22221 22334444444444322 4


Q ss_pred             CccEEEEccCCh
Q 018075          251 GIDVSFDCVGFD  262 (361)
Q Consensus       251 ~~d~vld~~g~~  262 (361)
                      ++|+++++.|..
T Consensus        88 ~iDilvnnAG~~   99 (255)
T d1fmca_          88 KVDILVNNAGGG   99 (255)
T ss_dssp             SCCEEEECCCCC
T ss_pred             CCCEeeeCCcCC
Confidence            799999998754

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=96.22  E-value=0.0078  Score=50.39  Aligned_cols=80  Identities=21%  Similarity=0.297  Sum_probs=55.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-HHHHcCCCEE---eecCCCccchhHHHHHHHhhcCCCc
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-IARNLGADET---AKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-~~~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      +|+++||.| ++++|.+.++.+...|+ .|+.+++++++.+ +.++++....   .++ .+..+..+.+.++.+. -+++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv-~~~~~~~~~~~~~~~~-~g~i   80 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGA-KVAVLDKSAERLAELETDHGDNVLGIVGDV-RSLEDQKQAASRCVAR-FGKI   80 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCT-TCHHHHHHHHHHHHHH-HSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeeEEeccc-ccHHHHHHHHHHHHHH-hCCc
Confidence            589999998 58999999999999999 6888889888764 4455664321   122 2333444444444332 2579


Q ss_pred             cEEEEccC
Q 018075          253 DVSFDCVG  260 (361)
Q Consensus       253 d~vld~~g  260 (361)
                      |+++++.|
T Consensus        81 dilvnnAG   88 (276)
T d1bdba_          81 DTLIPNAG   88 (276)
T ss_dssp             CEEECCCC
T ss_pred             cccccccc
Confidence            99999887

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.18  E-value=0.01  Score=49.55  Aligned_cols=82  Identities=22%  Similarity=0.274  Sum_probs=54.4

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH----HHcCCC--EE--eecC-CCccchhHHHHHHHhh
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGAD--ET--AKVS-TDIEDVDTDVGKIQNA  247 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~--~~--~~~~-~~~~~~~~~~~~~~~~  247 (361)
                      +|+++||.| ++++|.+.++.+...|+ .|+.+++++++.+.+    ++.+..  .+  +..+ .+..+..+.+.++.+.
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK   81 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            588999998 58999999999999999 688888988776533    233321  12  1111 2333444445544433


Q ss_pred             cCCCccEEEEccCC
Q 018075          248 MGSGIDVSFDCVGF  261 (361)
Q Consensus       248 ~~~~~d~vld~~g~  261 (361)
                      . +++|+++++.|.
T Consensus        82 ~-G~iDilVnnAG~   94 (274)
T d1xhla_          82 F-GKIDILVNNAGA   94 (274)
T ss_dssp             H-SCCCEEEECCCC
T ss_pred             c-CCceEEEeeccc
Confidence            2 479999998774

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=96.15  E-value=0.0063  Score=50.74  Aligned_cols=98  Identities=18%  Similarity=0.105  Sum_probs=68.5

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccE
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV  254 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  254 (361)
                      ...++.+||=+|||. |..+..+++...-..++++|.+++..+.+++......... .+..++.        .....||+
T Consensus        81 ~~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~-~d~~~l~--------~~~~sfD~  150 (268)
T d1p91a_          81 LDDKATAVLDIGCGE-GYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCV-ASSHRLP--------FSDTSMDA  150 (268)
T ss_dssp             SCTTCCEEEEETCTT-STTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEE-CCTTSCS--------BCTTCEEE
T ss_pred             cCCCCCEEEEeCCCC-cHHHHHHHHHCCCCEEEEecchHhhhhhhhccccccccee-eehhhcc--------CCCCCEEE
Confidence            346788999999877 7778888887633379999999999888877543321111 1111110        12456999


Q ss_pred             EEEccCChHHHHHHHHhhcCCCEEEEEcc
Q 018075          255 SFDCVGFDKTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       255 vld~~g~~~~~~~~~~~l~~~G~~v~~g~  283 (361)
                      |+.... +.+++++.+.|+|||+++....
T Consensus       151 v~~~~~-~~~~~e~~rvLkpgG~l~~~~p  178 (268)
T d1p91a_         151 IIRIYA-PCKAEELARVVKPGGWVITATP  178 (268)
T ss_dssp             EEEESC-CCCHHHHHHHEEEEEEEEEEEE
T ss_pred             EeecCC-HHHHHHHHHHhCCCcEEEEEee
Confidence            997655 4488999999999999998753

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=96.13  E-value=0.01  Score=49.23  Aligned_cols=81  Identities=23%  Similarity=0.265  Sum_probs=53.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-H---HcCCC--EE--e--ecCCCccchhHHHHHHHh
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-R---NLGAD--ET--A--KVSTDIEDVDTDVGKIQN  246 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~---~lg~~--~~--~--~~~~~~~~~~~~~~~~~~  246 (361)
                      +|+.+||.| ++++|.+.++.+...|+ .|+.+++++++.+.+ +   +.+..  .+  +  |+ ++..+..+.+.++..
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dv-t~~~~v~~~~~~~~~   81 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADV-TTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCT-TSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccC-CCHHHHHHHHHHHHH
Confidence            678889998 58999999999999999 688888988776533 2   23321  12  1  22 233344444444433


Q ss_pred             hcCCCccEEEEccCC
Q 018075          247 AMGSGIDVSFDCVGF  261 (361)
Q Consensus       247 ~~~~~~d~vld~~g~  261 (361)
                      . -+++|+++++.|.
T Consensus        82 ~-~g~iDilvnnAG~   95 (264)
T d1spxa_          82 K-FGKLDILVNNAGA   95 (264)
T ss_dssp             H-HSCCCEEEECCC-
T ss_pred             H-hCCCCEeeccccc
Confidence            2 2579999999874

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.11  E-value=0.0092  Score=50.85  Aligned_cols=99  Identities=20%  Similarity=0.276  Sum_probs=57.6

Q ss_pred             HHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHH---HHHHcCCC-EEeecCCCccchhHHHHHHH
Q 018075          171 CRR-ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS---IARNLGAD-ETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       171 l~~-~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~---~~~~lg~~-~~~~~~~~~~~~~~~~~~~~  245 (361)
                      +.+ ..+.+|++||-+||| .|..++.+|+ .|+.+|++++.++....   ..++.+.. .+.....+..++       .
T Consensus        27 i~~~~~~~~~~~VLDiGcG-~G~lsl~aa~-~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~l-------~   97 (311)
T d2fyta1          27 IYQNPHIFKDKVVLDVGCG-TGILSMFAAK-AGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEV-------H   97 (311)
T ss_dssp             HHHCGGGTTTCEEEEETCT-TSHHHHHHHH-TTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTS-------C
T ss_pred             HHhccccCCcCEEEEECCC-CCHHHHHHHH-cCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHHh-------c
Confidence            444 466789999999987 3666666666 68888999999886443   22333422 221111111111       1


Q ss_pred             hhcCCCccEEEEcc-----CChHHHHH----HHHhhcCCCEEE
Q 018075          246 NAMGSGIDVSFDCV-----GFDKTMST----ALNATRPGGKVC  279 (361)
Q Consensus       246 ~~~~~~~d~vld~~-----g~~~~~~~----~~~~l~~~G~~v  279 (361)
                       .....+|+|+...     .....++.    .-+.|+|+|+++
T Consensus        98 -~~~~~~D~Ivse~~~~~~~~e~~~~~~~~a~~~~Lkp~G~ii  139 (311)
T d2fyta1          98 -LPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY  139 (311)
T ss_dssp             -CSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred             -CccccceEEEEeeeeeecccccccHHHHHHHHhcCCCCcEEe
Confidence             1246899998622     11112223    335799999886

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.07  E-value=0.0041  Score=49.54  Aligned_cols=96  Identities=23%  Similarity=0.235  Sum_probs=60.0

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          179 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       179 g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      .++|+|.| +|.+|...+..+...|. .|.++.++.++.......++.. +..  +..+... +.+..    .+.|+||.
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~-~~g--D~~d~~~-l~~al----~~~d~vi~   73 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGPRPAHV-VVG--DVLQAAD-VDKTV----AGQDAVIV   73 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSCCCSEE-EES--CTTSHHH-HHHHH----TTCSEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEEcChhhccccccccccc-ccc--cccchhh-HHHHh----cCCCEEEE
Confidence            47899999 59999999998888898 6888888888764433334433 222  2223222 22221    46899999


Q ss_pred             ccCChH----------HHHHHHHhhcCC--CEEEEEcc
Q 018075          258 CVGFDK----------TMSTALNATRPG--GKVCLIGL  283 (361)
Q Consensus       258 ~~g~~~----------~~~~~~~~l~~~--G~~v~~g~  283 (361)
                      ++|...          ....+++.++..  .+++.++.
T Consensus        74 ~~g~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss  111 (205)
T d1hdoa_          74 LLGTRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTS  111 (205)
T ss_dssp             CCCCTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             EeccCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEee
Confidence            987531          233444444443  47777753

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=96.01  E-value=0.0058  Score=52.31  Aligned_cols=100  Identities=14%  Similarity=0.093  Sum_probs=62.3

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhhcCCCc
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      .+|++||=.+||. |..++++|+  |+..|++++.++...+.+++    .|.+.+-...   .+..+..+.+.. .+..|
T Consensus       144 ~~g~rVLDl~~gt-G~~s~~~a~--g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~---~d~~~~~~~~~~-~~~~f  216 (318)
T d1wxxa2         144 FRGERALDVFSYA-GGFALHLAL--GFREVVAVDSSAEALRRAEENARLNGLGNVRVLE---ANAFDLLRRLEK-EGERF  216 (318)
T ss_dssp             CCEEEEEEETCTT-THHHHHHHH--HEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEE---SCHHHHHHHHHH-TTCCE
T ss_pred             hCCCeeeccCCCC-cHHHHHHHh--cCCcEEeecchHHHHHHHHHHHHHcCCCCcceee---ccHHHHhhhhHh-hhcCC
Confidence            4789999887544 334455554  34479999999998877764    4554321111   243344443332 35689


Q ss_pred             cEEEEccCC-----h----------HHHHHHHHhhcCCCEEEEEcc
Q 018075          253 DVSFDCVGF-----D----------KTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       253 d~vld~~g~-----~----------~~~~~~~~~l~~~G~~v~~g~  283 (361)
                      |+|+-....     .          ..+..+++.|+|||.++.+.-
T Consensus       217 D~Vi~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpGG~Lv~~sc  262 (318)
T d1wxxa2         217 DLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASC  262 (318)
T ss_dssp             EEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             CEEEEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence            999853221     0          245667888999999987653

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=96.00  E-value=0.019  Score=46.18  Aligned_cols=97  Identities=18%  Similarity=0.191  Sum_probs=64.0

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHH---cCCCEEEEEeCChhHHHHHHHc----CCCEEeecCCCccchhHHHHHHHhhc
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARA---FGAPRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~---~g~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      .+++.+||-+|||. |..+..+++.   .++ .|+++|.+++-.+.+++.    +....+....  .+..       ...
T Consensus        37 ~~~~~~vLDlGCGt-G~~~~~l~~~~~~~~~-~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~--~d~~-------~~~  105 (225)
T d1im8a_          37 VTADSNVYDLGCSR-GAATLSARRNINQPNV-KIIGIDNSQPMVERCRQHIAAYHSEIPVEILC--NDIR-------HVE  105 (225)
T ss_dssp             CCTTCEEEEESCTT-CHHHHHHHHTCCCSSC-EEEEECSCHHHHHHHHHHHHTSCCSSCEEEEC--SCTT-------TCC
T ss_pred             cCCCCEEEEeccch-hhHHHHHHHhhcCCCC-ceEEeCCCHHHHHHHHHHhHhhcccchhhhcc--chhh-------ccc
Confidence            68999999999876 7777778775   366 799999999988877652    3221111111  1111       112


Q ss_pred             CCCccEEEEccCC--------hHHHHHHHHhhcCCCEEEEEcc
Q 018075          249 GSGIDVSFDCVGF--------DKTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       249 ~~~~d~vld~~g~--------~~~~~~~~~~l~~~G~~v~~g~  283 (361)
                      ...+|+++-+..-        ...++.+.+.|+|||.++....
T Consensus       106 ~~~~d~i~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~li~~~~  148 (225)
T d1im8a_         106 IKNASMVILNFTLQFLPPEDRIALLTKIYEGLNPNGVLVLSEK  148 (225)
T ss_dssp             CCSEEEEEEESCGGGSCGGGHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             cccceeeEEeeeccccChhhHHHHHHHHHHhCCCCceeecccc
Confidence            3467777654221        1468889999999999998653

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.99  E-value=0.049  Score=41.06  Aligned_cols=102  Identities=23%  Similarity=0.289  Sum_probs=71.9

Q ss_pred             HHHHHHh--cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHH
Q 018075          167 GVHACRR--ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKI  244 (361)
Q Consensus       167 a~~~l~~--~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~  244 (361)
                      .+.++.+  .-.-.|++++|.|.|-+|...++.++.+|+ +|++++.++-+.-.+.--|....        ...    +.
T Consensus        10 ~~~~~~r~t~~~l~Gk~v~V~GyG~iG~g~A~~~rg~G~-~V~v~e~dp~~al~A~~dG~~v~--------~~~----~a   76 (163)
T d1li4a1          10 LIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQALRGFGA-RVIITEIDPINALQAAMEGYEVT--------TMD----EA   76 (163)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC--------CHH----HH
T ss_pred             HHHHHHHHhCceecCCEEEEeccccccHHHHHHHHhCCC-eeEeeecccchhHHhhcCceEee--------ehh----hh
Confidence            4445533  445689999999999999999999999999 79999998866544443444221        111    11


Q ss_pred             HhhcCCCccEEEEccCChH-HHHHHHHhhcCCCEEEEEccCC
Q 018075          245 QNAMGSGIDVSFDCVGFDK-TMSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       245 ~~~~~~~~d~vld~~g~~~-~~~~~~~~l~~~G~~v~~g~~~  285 (361)
                          -...|+++-+.|... .-.+-++.|+++..+.-+|-..
T Consensus        77 ----~~~adivvtaTGn~~vI~~eh~~~MKdgaIL~N~Ghfd  114 (163)
T d1li4a1          77 ----CQEGNIFVTTTGCIDIILGRHFEQMKDDAIVCNIGHFD  114 (163)
T ss_dssp             ----TTTCSEEEECSSCSCSBCHHHHTTCCTTEEEEECSSST
T ss_pred             ----hhhccEEEecCCCccchhHHHHHhccCCeEEEEecccc
Confidence                246899999999752 4566778899888666655443

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=95.97  E-value=0.014  Score=48.66  Aligned_cols=81  Identities=28%  Similarity=0.355  Sum_probs=54.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHH----HcCCC--EE----eecCCCccchhHHHHHHHh
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR----NLGAD--ET----AKVSTDIEDVDTDVGKIQN  246 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~----~lg~~--~~----~~~~~~~~~~~~~~~~~~~  246 (361)
                      +|+++||.| ++++|.+.++.+...|+ .|+.+++++++.+.+.    +.+..  .+    .|+ .+..+..+.+.++.+
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dv-s~~~~v~~~~~~~~~   81 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADV-TTEDGQDQIINSTLK   81 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCT-TSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccC-CCHHHHHHHHHHHHH
Confidence            578899998 58999999999999999 6888889888765432    23321  11    222 233344444554443


Q ss_pred             hcCCCccEEEEccCC
Q 018075          247 AMGSGIDVSFDCVGF  261 (361)
Q Consensus       247 ~~~~~~d~vld~~g~  261 (361)
                      .. +++|+++++.|.
T Consensus        82 ~~-g~iDilvnnAG~   95 (272)
T d1xkqa_          82 QF-GKIDVLVNNAGA   95 (272)
T ss_dssp             HH-SCCCEEEECCCC
T ss_pred             Hh-CCceEEEeCCcc
Confidence            32 479999998764

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.94  E-value=0.027  Score=47.44  Aligned_cols=83  Identities=18%  Similarity=0.252  Sum_probs=55.3

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HHHc--------CCCEE---eecCCCccchhHHHHH
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNL--------GADET---AKVSTDIEDVDTDVGK  243 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~l--------g~~~~---~~~~~~~~~~~~~~~~  243 (361)
                      -+|+++||.| ++++|.+.++.+...|+ .|+.++++.++.+. ++++        +....   .|+ ++..+..+.+.+
T Consensus        10 L~gKvalITGas~GIG~aia~~la~~Ga-~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dv-s~~~~v~~~~~~   87 (297)
T d1yxma1          10 LQGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNI-RNEEEVNNLVKS   87 (297)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCT-TCHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccC-CCHHHHHHHHHH
Confidence            4789999998 58999999999988999 68888888876543 3333        21211   122 233444445554


Q ss_pred             HHhhcCCCccEEEEccCCh
Q 018075          244 IQNAMGSGIDVSFDCVGFD  262 (361)
Q Consensus       244 ~~~~~~~~~d~vld~~g~~  262 (361)
                      +.+.. +++|+++++.|..
T Consensus        88 ~~~~~-G~iDiLVnnAg~~  105 (297)
T d1yxma1          88 TLDTF-GKINFLVNNGGGQ  105 (297)
T ss_dssp             HHHHH-SCCCEEEECCCCC
T ss_pred             HHHHh-CCeEEEEeecccc
Confidence            44332 4799999988754

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.93  E-value=0.0038  Score=52.80  Aligned_cols=101  Identities=16%  Similarity=0.169  Sum_probs=63.4

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc----CCCEE-eecCCCccchhHHHHHHHhhcC
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADET-AKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~-~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      +.+++.+||-+|||. |..++.+++. |+ .|+++|.+++-.+.|++.    +.... ........++...-..+  ...
T Consensus        53 ~~~~~~~vLD~GcG~-G~~~~~la~~-g~-~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  127 (292)
T d1xvaa_          53 RQHGCHRVLDVACGT-GVDSIMLVEE-GF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDV--PAG  127 (292)
T ss_dssp             HHTTCCEEEESSCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHS--CCT
T ss_pred             hhcCCCEEEEecCCC-cHHHHHHHHc-CC-eeeeccCchHHHHHHHHHHHhcccccccceeeeeecccccccccc--CCC
Confidence            345678999999887 8888888875 88 799999999887777552    21110 00000001221111111  124


Q ss_pred             CCccEEEEccCCh--------------HHHHHHHHhhcCCCEEEE
Q 018075          250 SGIDVSFDCVGFD--------------KTMSTALNATRPGGKVCL  280 (361)
Q Consensus       250 ~~~d~vld~~g~~--------------~~~~~~~~~l~~~G~~v~  280 (361)
                      .++|.|+.....-              ..++.+.+.|+|||.++.
T Consensus       128 ~~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~  172 (292)
T d1xvaa_         128 DGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVI  172 (292)
T ss_dssp             TCEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEEEEEEE
T ss_pred             CCceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcCcEEEE
Confidence            6799998643211              268889999999999886

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=95.91  E-value=0.05  Score=40.67  Aligned_cols=83  Identities=23%  Similarity=0.303  Sum_probs=57.9

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHH-HcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEcc
Q 018075          181 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIAR-NLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV  259 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  259 (361)
                      +|.++|+|.+|.+.++-+...|...+++.++++++.+.+. ++|....-    +.+.            -...|+||=++
T Consensus         2 kI~fIG~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~~~----~~~~------------v~~~Div~lav   65 (152)
T d1yqga2           2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSA----TLPE------------LHSDDVLILAV   65 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEES----SCCC------------CCTTSEEEECS
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhccccccc----cccc------------ccccceEEEec
Confidence            5788999999998887443445447899999998877655 46654321    1111            13479999998


Q ss_pred             CChHHHHHHHHhhcCCCEEEE
Q 018075          260 GFDKTMSTALNATRPGGKVCL  280 (361)
Q Consensus       260 g~~~~~~~~~~~l~~~G~~v~  280 (361)
                      - |..+....+.+.+.++++.
T Consensus        66 k-P~~~~~v~~~l~~~~~~vi   85 (152)
T d1yqga2          66 K-PQDMEAACKNIRTNGALVL   85 (152)
T ss_dssp             C-HHHHHHHHTTCCCTTCEEE
T ss_pred             C-HHHHHHhHHHHhhcccEEe
Confidence            7 5578888888887776654

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=95.89  E-value=0.038  Score=45.01  Aligned_cols=101  Identities=20%  Similarity=0.264  Sum_probs=62.7

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHcCCCEEEEE-eCChhHHHHH----HHcCCCE-E--eecCCCccchhHHHHHHHhhcCCC
Q 018075          181 NVMIMG-SGPIGLVTLLAARAFGAPRIIIT-DVDVQRLSIA----RNLGADE-T--AKVSTDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       181 ~vlI~G-~g~~G~~ai~la~~~g~~~vv~v-~~~~~~~~~~----~~lg~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~  251 (361)
                      .+||.| ++++|.+.++.+...|++ |+.. .+++++.+.+    ++.|.+. .  .|+ .+.++..+.+.++.+. -++
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga~-V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv-~~~~~v~~~~~~~~~~-~g~   79 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGCK-VLVNYARSAKAAEEVSKQIEAYGGQAITFGGDV-SKEADVEAMMKTAIDA-WGT   79 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCE-EEEEESSCHHHHHHHHHHHHHHTCEEEEEECCT-TSHHHHHHHHHHHHHH-SSC
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCC-CCHHHHHHHHHHHHHH-cCC
Confidence            457778 589999999999999995 5554 4555544333    3445332 1  122 2333445555554443 357


Q ss_pred             ccEEEEccCCh-------------------------HHHHHHHHhh--cCCCEEEEEccC
Q 018075          252 IDVSFDCVGFD-------------------------KTMSTALNAT--RPGGKVCLIGLA  284 (361)
Q Consensus       252 ~d~vld~~g~~-------------------------~~~~~~~~~l--~~~G~~v~~g~~  284 (361)
                      +|+++++.|..                         ...+.+++.|  +.+|+++.++..
T Consensus        80 iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~  139 (244)
T d1edoa_          80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASV  139 (244)
T ss_dssp             CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCT
T ss_pred             CCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcCh
Confidence            99999988754                         1344455555  578999988753

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=95.88  E-value=0.038  Score=45.38  Aligned_cols=81  Identities=17%  Similarity=0.281  Sum_probs=54.0

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH----HHcCCCEE---eecCCCccchhHHHHHHHhhcCC
Q 018075          179 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADET---AKVSTDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       179 g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~~  250 (361)
                      |+.+||.| ++++|.+.++.+...|+ .|+.+++++++.+.+    ++.|....   .|+ ++.++..+.+.++.+. -+
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dv-s~~~~v~~~~~~~~~~-~g   78 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDV-RSVPEIEALVAAVVER-YG   78 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-TCHHHHHHHHHHHHHH-TC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeec-CCHHHHHHHHHHHHHH-hC
Confidence            56678998 58999999999989999 688888888765433    33453321   222 2334444455544432 35


Q ss_pred             CccEEEEccCCh
Q 018075          251 GIDVSFDCVGFD  262 (361)
Q Consensus       251 ~~d~vld~~g~~  262 (361)
                      ++|+++++.|..
T Consensus        79 ~iDilVnnAG~~   90 (257)
T d2rhca1          79 PVDVLVNNAGRP   90 (257)
T ss_dssp             SCSEEEECCCCC
T ss_pred             CCCEEEeccccc
Confidence            799999998754

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=95.84  E-value=0.013  Score=45.22  Aligned_cols=121  Identities=16%  Similarity=0.157  Sum_probs=67.3

Q ss_pred             HHHHhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcCCC-EEeecCCCccchhHHHHHHH
Q 018075          169 HACRRAN-VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGAD-ETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       169 ~~l~~~~-~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~-~~~~~~~~~~~~~~~~~~~~  245 (361)
                      .+++..+ ..++.+|+|+|+|+.+.+++.-+...+. .+..+.++.++.+.+ +.++.. .+.....+            
T Consensus         7 ~~l~~~~~~~~~k~vlIlGaGGaarai~~aL~~~~~-~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~------------   73 (171)
T d1p77a1           7 TDLQRLNWLRPNQHVLILGAGGATKGVLLPLLQAQQ-NIVLANRTFSKTKELAERFQPYGNIQAVSMD------------   73 (171)
T ss_dssp             HHHHHTTCCCTTCEEEEECCSHHHHTTHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGSCEEEEEGG------------
T ss_pred             HHHHHcCCCCCCCEEEEECCcHHHHHHHHHHcccCc-eeeeccchHHHHHHHHHHHhhccccchhhhc------------
Confidence            3455433 4578899999999999999987776554 788888888876544 444421 11111110            


Q ss_pred             hhcCCCccEEEEccCChHHHHH----HHHhhcCCCEEEEEccCCCCcceechHhhhcCc-EEE
Q 018075          246 NAMGSGIDVSFDCVGFDKTMST----ALNATRPGGKVCLIGLAKTEMTVALTPAAAREV-DVI  303 (361)
Q Consensus       246 ~~~~~~~d~vld~~g~~~~~~~----~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~-~i~  303 (361)
                      ...-..+|++++|++.. ....    ..+.+.++..++.+-...+..+..+...-..+. ++.
T Consensus        74 ~~~~~~~diiIN~tp~g-~~~~~~~~~~~~~~~~~~~~D~vy~~p~~T~~l~~A~~~g~~~v~  135 (171)
T d1p77a1          74 SIPLQTYDLVINATSAG-LSGGTASVDAEILKLGSAFYDMQYAKGTDTPFIALCKSLGLTNVS  135 (171)
T ss_dssp             GCCCSCCSEEEECCCC--------CCCHHHHHHCSCEEESCCCTTSCCHHHHHHHHTTCCCEE
T ss_pred             cccccccceeeeccccc-ccccccchhhhhhcccceeeeeeccCcccHHHHHHHHHcCCCccc
Confidence            00135799999998754 2111    123345566665554433322333333333443 343

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=95.82  E-value=0.024  Score=44.44  Aligned_cols=99  Identities=11%  Similarity=0.233  Sum_probs=63.9

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCC--EEeecCCCccchhHHHHHH
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGAD--ETAKVSTDIEDVDTDVGKI  244 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~--~~~~~~~~~~~~~~~~~~~  244 (361)
                      ++.....++++||-+|||. |..++.+++ .+. .+.+++.++...+.+++    .+..  .+.....   +..+.   +
T Consensus        45 i~~l~~~~~~~VLDiGcG~-G~~~~~la~-~~~-~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~---d~~~~---~  115 (194)
T d1dusa_          45 VENVVVDKDDDILDLGCGY-GVIGIALAD-EVK-STTMADINRRAIKLAKENIKLNNLDNYDIRVVHS---DLYEN---V  115 (194)
T ss_dssp             HHHCCCCTTCEEEEETCTT-SHHHHHHGG-GSS-EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEEC---STTTT---C
T ss_pred             HHhCCcCCCCeEEEEeecC-ChhHHHHHh-hcc-ccceeeeccccchhHHHHHHHhCCccceEEEEEc---chhhh---h
Confidence            4557789999999999876 666777766 444 79999999988777764    2322  1211111   21111   1


Q ss_pred             HhhcCCCccEEEEccC---Ch----HHHHHHHHhhcCCCEEEEE
Q 018075          245 QNAMGSGIDVSFDCVG---FD----KTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       245 ~~~~~~~~d~vld~~g---~~----~~~~~~~~~l~~~G~~v~~  281 (361)
                         .+..+|+|+....   +.    ..++.+.+.|+|+|+++.+
T Consensus       116 ---~~~~fD~Ii~~~p~~~~~~~~~~~l~~~~~~LkpgG~l~i~  156 (194)
T d1dusa_         116 ---KDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVV  156 (194)
T ss_dssp             ---TTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ---ccCCceEEEEcccEEecchhhhhHHHHHHHhcCcCcEEEEE
Confidence               1467999997322   12    2467778899999998754

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.79  E-value=0.012  Score=46.53  Aligned_cols=86  Identities=23%  Similarity=0.285  Sum_probs=62.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  256 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  256 (361)
                      -.|.+|+|.|.|.+|..+++++...|+ +|++++.+.++.....++|...+-.     ++       +   ...+.|+.+
T Consensus        25 L~gk~v~IqG~G~VG~~~A~~L~~~Ga-kvvv~d~d~~~~~~~~~~g~~~~~~-----~~-------~---~~~~~DI~i   88 (201)
T d1c1da1          25 LDGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHTAVAL-----ED-------V---LSTPCDVFA   88 (201)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEECCG-----GG-------G---GGCCCSEEE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEecchHHHHHHHHhhcccccCc-----cc-------c---ccccceeee
Confidence            478999999999999999999999999 7899999999999888888754211     11       1   135788888


Q ss_pred             EccCChHHHHHHHHhhcCCCEEEE
Q 018075          257 DCVGFDKTMSTALNATRPGGKVCL  280 (361)
Q Consensus       257 d~~g~~~~~~~~~~~l~~~G~~v~  280 (361)
                      =|......-....+.++  .+++.
T Consensus        89 PcA~~~~I~~~~a~~i~--ak~i~  110 (201)
T d1c1da1          89 PCAMGGVITTEVARTLD--CSVVA  110 (201)
T ss_dssp             ECSCSCCBCHHHHHHCC--CSEEC
T ss_pred             cccccccccHHHHhhhh--hheee
Confidence            76554434445555553  45553

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=95.76  E-value=0.079  Score=42.92  Aligned_cols=102  Identities=19%  Similarity=0.225  Sum_probs=64.2

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHcCCC------EEEEEeCChhHHHHH----HHcCCCE-Ee--ecCCCccchhHHHHHHHh
Q 018075          181 NVMIMG-SGPIGLVTLLAARAFGAP------RIIITDVDVQRLSIA----RNLGADE-TA--KVSTDIEDVDTDVGKIQN  246 (361)
Q Consensus       181 ~vlI~G-~g~~G~~ai~la~~~g~~------~vv~v~~~~~~~~~~----~~lg~~~-~~--~~~~~~~~~~~~~~~~~~  246 (361)
                      .|||.| ++++|.+.+..+...|++      .++.+++++++.+.+    ++.|... .+  |+ ++.++..+.+.++.+
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv-t~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADI-SDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCT-TSHHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecC-CCHHHHHHHHHHHHH
Confidence            367888 589999999988888885      377788888775533    2234322 11  22 233444444544443


Q ss_pred             hcCCCccEEEEccCCh----------H---------------HHHHHHHhh--cCCCEEEEEccC
Q 018075          247 AMGSGIDVSFDCVGFD----------K---------------TMSTALNAT--RPGGKVCLIGLA  284 (361)
Q Consensus       247 ~~~~~~d~vld~~g~~----------~---------------~~~~~~~~l--~~~G~~v~~g~~  284 (361)
                      . -+++|+++++.|..          +               ..+.+++.|  +.+|+++.++..
T Consensus        82 ~-~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~  145 (240)
T d2bd0a1          82 R-YGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSV  145 (240)
T ss_dssp             H-TSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG
T ss_pred             H-cCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEech
Confidence            2 35799999998754          1               344455555  357999988744

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=95.68  E-value=0.0051  Score=42.23  Aligned_cols=35  Identities=29%  Similarity=0.305  Sum_probs=30.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  213 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~  213 (361)
                      +|.+|+|+|.|..|+++++++...|+ .|.+.|.+.
T Consensus         4 ~~K~v~ViGlG~sG~s~a~~L~~~g~-~v~~~D~~~   38 (93)
T d2jfga1           4 QGKNVVIIGLGLTGLSCVDFFLARGV-TPRVMDTRM   38 (93)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHHHTTC-CCEEEESSS
T ss_pred             CCCEEEEEeECHHHHHHHHHHHHCCC-EEEEeeCCc
Confidence            57899999999999999999999999 577777644

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.62  E-value=0.015  Score=49.57  Aligned_cols=96  Identities=18%  Similarity=0.240  Sum_probs=57.0

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHH---HHHHHcCCCE-EeecCCCccchhHHHHHHHhhcC
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRL---SIARNLGADE-TAKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~---~~~~~lg~~~-~~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      ..+.+|++||-+|||. |..++.+|+ .|+..|++++.++...   +.++..+... +.....+..+..        ...
T Consensus        29 ~~~~~~~~VLDiGcG~-G~ls~~aa~-~Ga~~V~avd~s~~~~~a~~~~~~n~~~~~v~~~~~~~~~~~--------~~~   98 (316)
T d1oria_          29 RHLFKDKVVLDVGSGT-GILCMFAAK-AGARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVE--------LPV   98 (316)
T ss_dssp             HHHHTTCEEEEETCTT-SHHHHHHHH-TTCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCC--------CSS
T ss_pred             cccCCcCEEEEEecCC-cHHHHHHHH-hCCCEEEEEcCcHHHhhhhhHHHHhCCccccceEeccHHHcc--------ccc
Confidence            3456899999999875 777766666 6887899999887432   2233334322 221111111110        123


Q ss_pred             CCccEEEEccCC---------hHHHHHHHHhhcCCCEEE
Q 018075          250 SGIDVSFDCVGF---------DKTMSTALNATRPGGKVC  279 (361)
Q Consensus       250 ~~~d~vld~~g~---------~~~~~~~~~~l~~~G~~v  279 (361)
                      ..+|+|+.....         +..+...-+.|+|+|+++
T Consensus        99 ~~~D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~G~ii  137 (316)
T d1oria_          99 EKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIF  137 (316)
T ss_dssp             SCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             ceeEEEeeeeeeeeeccHHHHHHHHHHHHhcCCCCeEEE
Confidence            579999763221         124455567999999885

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.55  E-value=0.047  Score=42.75  Aligned_cols=95  Identities=20%  Similarity=0.270  Sum_probs=61.4

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhhcCCC
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (361)
                      +++| +||-+||| .|..+..+++ .|+ .|++++.+++..+.+++    .+.+.+.....   ++...      .....
T Consensus        29 ~~~g-rvLDiGcG-~G~~~~~la~-~g~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~---d~~~~------~~~~~   95 (198)
T d2i6ga1          29 VAPG-RTLDLGCG-NGRNSLYLAA-NGY-DVTAWDKNPASMANLERIKAAEGLDNLQTDLV---DLNTL------TFDGE   95 (198)
T ss_dssp             SCSC-EEEEETCT-TSHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCTTEEEEEC---CTTTC------CCCCC
T ss_pred             CCCC-cEEEECCC-CCHHHHHHHH-Hhh-hhccccCcHHHHHHHHHHhhhccccchhhhhe---ecccc------ccccc
Confidence            4454 89999998 4888888876 588 79999999987766543    44443211111   11110      01357


Q ss_pred             ccEEEEcc-----CCh---HHHHHHHHhhcCCCEEEEEcc
Q 018075          252 IDVSFDCV-----GFD---KTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       252 ~d~vld~~-----g~~---~~~~~~~~~l~~~G~~v~~g~  283 (361)
                      ||+|+...     ..+   ..++.+.+.|+|+|.++....
T Consensus        96 fD~I~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~  135 (198)
T d2i6ga1          96 YDFILSTVVMMFLEAQTIPGLIANMQRCTKPGGYNLIVAA  135 (198)
T ss_dssp             EEEEEEESCGGGSCTTHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             ccEEEEeeeeecCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence            99998733     111   367778888999999988643

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=95.50  E-value=0.031  Score=46.06  Aligned_cols=83  Identities=16%  Similarity=0.244  Sum_probs=54.5

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH-----HHHHcCCCEE-eecC-CCccchhHHHHHHHhhcC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS-----IARNLGADET-AKVS-TDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~-----~~~~lg~~~~-~~~~-~~~~~~~~~~~~~~~~~~  249 (361)
                      +|+++||.| ++++|.+.++.+...|+ .|+.++++.++.+     +.++.|.... +..+ ++.++..+.+.++.+. -
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~-~   85 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDAD-L   85 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH-S
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHH-h
Confidence            578999998 58999999999999999 6788877765432     2344454321 1111 2334455555555432 3


Q ss_pred             CCccEEEEccCCh
Q 018075          250 SGIDVSFDCVGFD  262 (361)
Q Consensus       250 ~~~d~vld~~g~~  262 (361)
                      +++|+++++.|..
T Consensus        86 g~iDilVnnAg~~   98 (260)
T d1h5qa_          86 GPISGLIANAGVS   98 (260)
T ss_dssp             CSEEEEEECCCCC
T ss_pred             CCCcEeccccccc
Confidence            5899999988743

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.50  E-value=0.13  Score=38.57  Aligned_cols=90  Identities=13%  Similarity=0.187  Sum_probs=64.9

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccC
Q 018075          181 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG  260 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  260 (361)
                      +|-|+|.|.+|...+.-+...|. .|++.++++++.+.+.+.++...       .+..+..        ...|++|-|+.
T Consensus         2 kIgiIGlG~MG~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~~~~~-------~~~~e~~--------~~~d~ii~~v~   65 (161)
T d1vpda2           2 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAETA-------STAKAIA--------EQCDVIITMLP   65 (161)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC-------SSHHHHH--------HHCSEEEECCS
T ss_pred             EEEEEehhHHHHHHHHHHHHCCC-eEEEEeCCcchhHHHHHhhhhhc-------ccHHHHH--------hCCCeEEEEcC
Confidence            57889999999999987778899 68899999999998888876431       1222222        35899999998


Q ss_pred             ChHHHHHH-------HHhhcCCCEEEEEccCCC
Q 018075          261 FDKTMSTA-------LNATRPGGKVCLIGLAKT  286 (361)
Q Consensus       261 ~~~~~~~~-------~~~l~~~G~~v~~g~~~~  286 (361)
                      .+...+..       ...+.++..++.++....
T Consensus        66 ~~~~v~~v~~~~~~~~~~~~~g~iiid~sT~~p   98 (161)
T d1vpda2          66 NSPHVKEVALGENGIIEGAKPGTVLIDMSSIAP   98 (161)
T ss_dssp             SHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCH
T ss_pred             CHHHHHHHHhCCcchhhccCCCCEEEECCCCCH
Confidence            77666554       345667777776655443

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.49  E-value=0.066  Score=40.96  Aligned_cols=101  Identities=19%  Similarity=0.094  Sum_probs=64.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHcC-CCEEEEE-eCC-hhHHHHHHHcCCCEEeecCCCccchhHHHHHHHh-------hcCC
Q 018075          181 NVMIMGSGPIGLVTLLAARAFG-APRIIIT-DVD-VQRLSIARNLGADETAKVSTDIEDVDTDVGKIQN-------AMGS  250 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~g-~~~vv~v-~~~-~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~-------~~~~  250 (361)
                      +|.|.|.|-+|......+.... . .++++ +.+ ......+.+.+.+......   ... .......-       ..-.
T Consensus         4 rIaINGfGRIGR~v~Ral~~~~di-eiVaINd~~~~~~~~~l~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~   78 (172)
T d2czca2           4 KVGVNGYGTIGKRVAYAVTKQDDM-ELIGITKTKPDFEAYRAKELGIPVYAASE---EFI-PRFEKEGFEVAGTLNDLLE   78 (172)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTE-EEEEEEESSCSHHHHHHHHTTCCEEESSG---GGH-HHHHHHTCCCSCBHHHHHT
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCc-eEEEEecCCChHHHHHhhhcCceeecccc---cce-eeecccCccccchhhhhhc
Confidence            6889999999998888765543 5 34444 433 3445566666655432211   111 11111000       0013


Q ss_pred             CccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC
Q 018075          251 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT  286 (361)
Q Consensus       251 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  286 (361)
                      ++|+|+||+|.-...+.+-.++..|-+.|..+.+..
T Consensus        79 ~vDvViEcTG~f~~~~~~~~hl~~G~k~Vi~s~~~~  114 (172)
T d2czca2          79 KVDIIVDATPGGIGAKNKPLYEKAGVKAIFQGGEKA  114 (172)
T ss_dssp             TCSEEEECCSTTHHHHHHHHHHHHTCEEEECTTSCG
T ss_pred             cCCEEEECCCCCCCHHHHHHHHHcCCCEEEECCCCc
Confidence            799999999988778888899999999999886544

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=95.48  E-value=0.05  Score=44.51  Aligned_cols=83  Identities=17%  Similarity=0.221  Sum_probs=50.4

Q ss_pred             CCCCEEEEEC-CC--HHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecC-CCccchhHHHHHHHhhc
Q 018075          177 GPETNVMIMG-SG--PIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVS-TDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       177 ~~g~~vlI~G-~g--~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~-~~~~~~~~~~~~~~~~~  248 (361)
                      -+|+++||.| +|  ++|.+.+..+...|+ .|+.+.++++..+.+++    .+.......+ .+..+......+... .
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~   80 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGK-V   80 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHT-T
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhh-c
Confidence            4789999998 45  688989888888999 57777777665444333    3433332222 222222223222222 3


Q ss_pred             CCCccEEEEccCC
Q 018075          249 GSGIDVSFDCVGF  261 (361)
Q Consensus       249 ~~~~d~vld~~g~  261 (361)
                      ....|+.+++.+.
T Consensus        81 ~~~~d~~v~~a~~   93 (258)
T d1qsga_          81 WPKFDGFVHSIGF   93 (258)
T ss_dssp             CSSEEEEEECCCC
T ss_pred             ccccceEEEeecc
Confidence            4678999987654

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.47  E-value=0.011  Score=48.98  Aligned_cols=97  Identities=18%  Similarity=0.166  Sum_probs=62.2

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCE-EeecCCCccchhHHHHHHHhhcC
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADE-TAKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~-~~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      .+++|++||-+|||. |..++.+|+. |+..|++++.+++..+.+++    .|... +..+..+..++       .  ..
T Consensus       104 ~~~~g~~VlD~~aG~-G~~~l~~a~~-~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~~~-------~--~~  172 (260)
T d2frna1         104 VAKPDELVVDMFAGI-GHLSLPIAVY-GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDF-------P--GE  172 (260)
T ss_dssp             HCCTTCEEEETTCTT-TTTHHHHHHH-TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTC-------C--CC
T ss_pred             hcCCccEEEECcceE-cHHHHHHHHh-CCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchHHh-------c--cC
Confidence            368999999987654 5566677775 54489999999998877765    34432 22222221111       1  13


Q ss_pred             CCccEEEEc--cCChHHHHHHHHhhcCCCEEEEEc
Q 018075          250 SGIDVSFDC--VGFDKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       250 ~~~d~vld~--~g~~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ..+|.|+-.  ..+...+..+++.|++||.+....
T Consensus       173 ~~~D~Ii~~~p~~~~~~l~~a~~~l~~gG~lh~~~  207 (260)
T d2frna1         173 NIADRILMGYVVRTHEFIPKALSIAKDGAIIHYHN  207 (260)
T ss_dssp             SCEEEEEECCCSSGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             CCCCEEEECCCCchHHHHHHHHhhcCCCCEEEEEe
Confidence            568866542  233447788999999999886543

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=95.40  E-value=0.075  Score=39.94  Aligned_cols=94  Identities=22%  Similarity=0.291  Sum_probs=56.6

Q ss_pred             CEEEEECCCHHHH-HHHHHHHHcCCCEEEEE-eCCh--hHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          180 TNVMIMGSGPIGL-VTLLAARAFGAPRIIIT-DVDV--QRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       180 ~~vlI~G~g~~G~-~ai~la~~~g~~~vv~v-~~~~--~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      -++.|+|+|.+|. ..+++++....-.++++ +++.  ....+++++|......      .........   ...++|+|
T Consensus         5 irvaIIGaG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~~------~~d~l~~~~---~~~~iDiV   75 (157)
T d1nvmb1           5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYA------GVEGLIKLP---EFADIDFV   75 (157)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESS------HHHHHHHSG---GGGGEEEE
T ss_pred             cEEEEEcCcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCccccc------ceeeeeecc---cccccCEE
Confidence            4789999999986 56788876644345554 4444  3457788888754211      121111111   12479999


Q ss_pred             EEccCChHHHHHH--HHhhcCCCEEEEEc
Q 018075          256 FDCVGFDKTMSTA--LNATRPGGKVCLIG  282 (361)
Q Consensus       256 ld~~g~~~~~~~~--~~~l~~~G~~v~~g  282 (361)
                      |+++....+....  .+.+..|-+++...
T Consensus        76 f~ATpag~h~~~~~~~~aa~~G~~VID~s  104 (157)
T d1nvmb1          76 FDATSASAHVQNEALLRQAKPGIRLIDLT  104 (157)
T ss_dssp             EECSCHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             EEcCCchhHHHhHHHHHHHHcCCEEEEcc
Confidence            9998865565544  34466666666554

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=95.38  E-value=0.07  Score=43.66  Aligned_cols=78  Identities=21%  Similarity=0.276  Sum_probs=51.6

Q ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH----HHcCCCEE---eecCCCccchhHHHHHHHhhcCCCcc
Q 018075          182 VMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADET---AKVSTDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       182 vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      +||.| ++++|.+.+..+...|+ .|+.+++++++.+.+    ++.|....   .|. ++.++..+.+.++.+. -+++|
T Consensus         4 alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv-~~~~~v~~~~~~~~~~-~g~iD   80 (255)
T d1gega_           4 ALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDV-SDRDQVFAAVEQARKT-LGGFD   80 (255)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCT-TSHHHHHHHHHHHHHH-TTCCC
T ss_pred             EEEcCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeC-CCHHHHHHHHHHHHHH-hCCcc
Confidence            48888 58999999998888999 688888988776533    33453321   232 2334444445444432 35799


Q ss_pred             EEEEccCCh
Q 018075          254 VSFDCVGFD  262 (361)
Q Consensus       254 ~vld~~g~~  262 (361)
                      +++++.|..
T Consensus        81 ilVnnAG~~   89 (255)
T d1gega_          81 VIVNNAGVA   89 (255)
T ss_dssp             EEEECCCCC
T ss_pred             EEEeccccc
Confidence            999988754

>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Bacillus subtilis [TaxId: 1423]

Probab=95.32  E-value=0.11  Score=40.86  Aligned_cols=95  Identities=12%  Similarity=0.060  Sum_probs=64.7

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH----HHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          180 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSI----ARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       180 ~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~----~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      -.||-+|||. |..++.+|+...-..+++++.+......    +++.+.+.+..+..   +.......+   ....+|.|
T Consensus        31 PlvLeIGcG~-G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~---Da~~l~~~~---~~~~~d~v  103 (204)
T d2fcaa1          31 PIHIEVGTGK-GQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNI---DADTLTDVF---EPGEVKRV  103 (204)
T ss_dssp             CEEEEECCTT-SHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECC---CGGGHHHHC---CTTSCCEE
T ss_pred             ceEEEEEecC-cHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhccc---chhhhhccc---Cchhhhcc
Confidence            3456679887 8899999998754489999998876544    45567765544333   222222222   24568888


Q ss_pred             EEccCCh--------------HHHHHHHHhhcCCCEEEEE
Q 018075          256 FDCVGFD--------------KTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       256 ld~~g~~--------------~~~~~~~~~l~~~G~~v~~  281 (361)
                      +-....+              ..++.+.+.|+|||.+.+.
T Consensus       104 ~i~fp~P~~k~~h~k~Rl~~~~~l~~~~r~LkpgG~l~i~  143 (204)
T d2fcaa1         104 YLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFK  143 (204)
T ss_dssp             EEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEE
T ss_pred             ccccccccchhhhcchhhhHHHHHHHHHHhCCCCcEEEEE
Confidence            7654432              5788899999999999775

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=95.29  E-value=0.1  Score=41.78  Aligned_cols=105  Identities=15%  Similarity=0.159  Sum_probs=70.9

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhh--
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNA--  247 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~--  247 (361)
                      +.....+||-+|++. |+.++.+|+.+. -..+++++.+++..+.+++    .|...-+.+.  .++..+.+.++...  
T Consensus        56 ~~~~~k~iLEiGT~~-GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~--~g~a~~~L~~l~~~~~  132 (227)
T d1susa1          56 KLINAKNTMEIGVYT-GYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFR--EGPALPVLDEMIKDEK  132 (227)
T ss_dssp             HHHTCCEEEEECCGG-GHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEE--ESCHHHHHHHHHHCGG
T ss_pred             HhcCCCcEEEecchh-hhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeee--ehHHHHHHHHHHhccc
Confidence            345568999999755 788888888764 2279999999988766655    4654322221  24555566665432  


Q ss_pred             cCCCccEEEEccCCh---HHHHHHHHhhcCCCEEEEEc
Q 018075          248 MGSGIDVSFDCVGFD---KTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       248 ~~~~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ....||+||--....   .-++.+++.|++||.++.=.
T Consensus       133 ~~~~fD~iFiDa~k~~y~~~~e~~~~ll~~gGiii~DN  170 (227)
T d1susa1         133 NHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDN  170 (227)
T ss_dssp             GTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEET
T ss_pred             cCCceeEEEeccchhhhHHHHHHHHhhcCCCcEEEEcc
Confidence            245799998644333   36778899999999888743

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.26  E-value=0.025  Score=48.38  Aligned_cols=96  Identities=18%  Similarity=0.225  Sum_probs=55.5

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhH---HHHHHHcCCC-EEeecCCCccchhHHHHHHHhhcC
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQR---LSIARNLGAD-ETAKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~---~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      ..+.+|++||-+|||. |..+..+|+ .|+..|++++.++.-   .+..++.+.. .+..+..+..+.       . ...
T Consensus        34 ~~~~~~~~VLDlGcGt-G~ls~~aa~-~Ga~~V~avd~s~~~~~a~~~~~~~~~~~~i~~i~~~~~~l-------~-~~~  103 (328)
T d1g6q1_          34 KDLFKDKIVLDVGCGT-GILSMFAAK-HGAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDV-------H-LPF  103 (328)
T ss_dssp             HHHHTTCEEEEETCTT-SHHHHHHHH-TCCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTS-------C-CSS
T ss_pred             cccCCcCEEEEeCCCC-CHHHHHHHH-hCCCEEEEEeCCHHHHHHHHHHHHhCccccceEEEeehhhc-------c-Ccc
Confidence            3456899999999875 666654444 788899999988632   2233444532 222111211111       0 124


Q ss_pred             CCccEEEEccCC-----h----HHHHHHHHhhcCCCEEE
Q 018075          250 SGIDVSFDCVGF-----D----KTMSTALNATRPGGKVC  279 (361)
Q Consensus       250 ~~~d~vld~~g~-----~----~~~~~~~~~l~~~G~~v  279 (361)
                      ..+|+|+...-.     .    ..+...-+.|+|||+++
T Consensus       104 ~~~D~i~se~~~~~~~~e~~~~~~~~a~~r~LkpgG~ii  142 (328)
T d1g6q1_         104 PKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF  142 (328)
T ss_dssp             SCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             cceeEEEEEecceeeccchhHHHHHHHHHhccCCCeEEE
Confidence            679999763211     1    13444457899999874

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=95.21  E-value=0.0034  Score=51.58  Aligned_cols=91  Identities=18%  Similarity=0.184  Sum_probs=60.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhhcCCCc
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      .++.+||=+|||. |..+..+++ .|. .++++|.+++-.+.|++    .+...-+. ..   +...    +.  ....|
T Consensus        36 ~~~~~vLDiGCG~-G~~~~~l~~-~g~-~v~GvD~S~~ml~~A~~~~~~~~~~v~~~-~~---d~~~----~~--~~~~f  102 (246)
T d1y8ca_          36 LVFDDYLDLACGT-GNLTENLCP-KFK-NTWAVDLSQEMLSEAENKFRSQGLKPRLA-CQ---DISN----LN--INRKF  102 (246)
T ss_dssp             CCTTEEEEETCTT-STTHHHHGG-GSS-EEEEECSCHHHHHHHHHHHHHTTCCCEEE-CC---CGGG----CC--CSCCE
T ss_pred             CCCCeEEEEeCcC-CHHHHHHHH-hCC-ccEeeccchhhhhhccccccccCccceee-cc---chhh----hc--ccccc
Confidence            4568999999986 778887776 477 69999999987776654    33321111 11   2111    11  24579


Q ss_pred             cEEEEccCC------h----HHHHHHHHhhcCCCEEEE
Q 018075          253 DVSFDCVGF------D----KTMSTALNATRPGGKVCL  280 (361)
Q Consensus       253 d~vld~~g~------~----~~~~~~~~~l~~~G~~v~  280 (361)
                      |+|+...+.      .    ..++.+.++|+|||.++.
T Consensus       103 D~i~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~~i~  140 (246)
T d1y8ca_         103 DLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIF  140 (246)
T ss_dssp             EEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred             cccceeeeeeeccCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence            999864321      1    257778889999999885

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=95.20  E-value=0.13  Score=38.49  Aligned_cols=101  Identities=22%  Similarity=0.181  Sum_probs=71.1

Q ss_pred             HHHHHh--cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHH
Q 018075          168 VHACRR--ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       168 ~~~l~~--~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~  245 (361)
                      +.++.+  .-.-.|.+++|.|-|-+|.-.++-+|.+|+ +|++++.++-+.-.+.--|... .       ..    .+. 
T Consensus        10 ~d~i~r~t~~~laGk~vvV~GYG~vGrG~A~~~rg~Ga-~V~V~E~DPi~alqA~mdGf~v-~-------~~----~~a-   75 (163)
T d1v8ba1          10 PDGLMRATDFLISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGFNV-V-------TL----DEI-   75 (163)
T ss_dssp             HHHHHHHHCCCCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTCEE-C-------CH----HHH-
T ss_pred             HHHHHHHhCceecCCEEEEecccccchhHHHHHHhCCC-EEEEEecCchhhHHHHhcCCcc-C-------ch----hHc-
Confidence            444433  345789999999999999999999999999 7999999886543333233321 1       11    111 


Q ss_pred             hhcCCCccEEEEccCChH-HHHHHHHhhcCCCEEEEEccCC
Q 018075          246 NAMGSGIDVSFDCVGFDK-TMSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       246 ~~~~~~~d~vld~~g~~~-~~~~~~~~l~~~G~~v~~g~~~  285 (361)
                         -...|+++-+.|... ...+-++.|+.+..+.-.|-..
T Consensus        76 ---~~~aDi~vTaTGn~~vI~~~h~~~MKdgaIl~N~GHfd  113 (163)
T d1v8ba1          76 ---VDKGDFFITCTGNVDVIKLEHLLKMKNNAVVGNIGHFD  113 (163)
T ss_dssp             ---TTTCSEEEECCSSSSSBCHHHHTTCCTTCEEEECSSTT
T ss_pred             ---cccCcEEEEcCCCCccccHHHHHHhhCCeEEEeccccc
Confidence               256899999999874 3566788999999666555333

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=95.17  E-value=0.036  Score=45.49  Aligned_cols=87  Identities=23%  Similarity=0.269  Sum_probs=52.0

Q ss_pred             cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChh----HH---HHHHHcCCCEE-eecC-CCccchhHHHHH
Q 018075          174 ANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ----RL---SIARNLGADET-AKVS-TDIEDVDTDVGK  243 (361)
Q Consensus       174 ~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~----~~---~~~~~lg~~~~-~~~~-~~~~~~~~~~~~  243 (361)
                      ..++|+.++||.| +|++|.+.+..+...|++.++.+.+++.    ..   +.+++.|.... +..+ .+..+.......
T Consensus         4 ~~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~   83 (259)
T d2fr1a1           4 DEWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGG   83 (259)
T ss_dssp             CCCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred             cccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcc
Confidence            3578999999998 6999999999888889866676655432    22   23344564322 1111 111222222222


Q ss_pred             HHhhcCCCccEEEEccCCh
Q 018075          244 IQNAMGSGIDVSFDCVGFD  262 (361)
Q Consensus       244 ~~~~~~~~~d~vld~~g~~  262 (361)
                      +.+  ..++|.++.+.|..
T Consensus        84 i~~--~~~i~~vv~~ag~~  100 (259)
T d2fr1a1          84 IGD--DVPLSAVFHAAATL  100 (259)
T ss_dssp             SCT--TSCEEEEEECCCCC
T ss_pred             ccc--cccccccccccccc
Confidence            211  24689999988754

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=95.17  E-value=0.042  Score=46.33  Aligned_cols=98  Identities=13%  Similarity=0.127  Sum_probs=65.8

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCC--------EEeecCCCccchhHHHHHHHhhc
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD--------ETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~--------~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      ...++|||+|.|. |..+-.+++......|..++-+++-.+.++++-..        .+-..   ..|..+.+++    .
T Consensus       105 ~~pk~VLIiGgG~-G~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~---i~Da~~~l~~----~  176 (312)
T d2b2ca1         105 PDPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLF---CGDGFEFLKN----H  176 (312)
T ss_dssp             SSCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEE---CSCHHHHHHH----C
T ss_pred             CCCCeEEEeCCCc-hHHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEE---EchHHHHHHh----C
Confidence            4457999998765 55666788877777899999999999998885311        11110   1344444433    3


Q ss_pred             CCCccEEEEccCCh----------HHHHHHHHhhcCCCEEEEEc
Q 018075          249 GSGIDVSFDCVGFD----------KTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       249 ~~~~d~vld~~g~~----------~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ...+|+||--...+          +.++.+.++|+++|.++.-.
T Consensus       177 ~~~yDvII~D~~dp~~~~~~L~t~eFy~~~~~~L~~~Gi~v~q~  220 (312)
T d2b2ca1         177 KNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG  220 (312)
T ss_dssp             TTCEEEEEECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred             CCCCCEEEEcCCCCCCcchhhhhHHHHHHHHhhcCCCcEEEEec
Confidence            57899998533222          35777888999999988754

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=95.11  E-value=0.096  Score=39.65  Aligned_cols=129  Identities=13%  Similarity=0.158  Sum_probs=76.3

Q ss_pred             EEEEECCCHHHHH-HHHHHHHc-CCCEEEEEeCChhHHH-HHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          181 NVMIMGSGPIGLV-TLLAARAF-GAPRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       181 ~vlI~G~g~~G~~-ai~la~~~-g~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      ++.|+|+|..|.. .+...+.. +. .+++++.++++.+ ++++++.....      .++.+.+       ..++|+|+-
T Consensus         3 rvgiiG~G~~~~~~~~~~l~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~------~~~~~ll-------~~~iD~V~I   68 (167)
T d1xeaa1           3 KIAMIGLGDIAQKAYLPVLAQWPDI-ELVLCTRNPKVLGTLATRYRVSATC------TDYRDVL-------QYGVDAVMI   68 (167)
T ss_dssp             EEEEECCCHHHHHTHHHHHTTSTTE-EEEEECSCHHHHHHHHHHTTCCCCC------SSTTGGG-------GGCCSEEEE
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCc-EEEEEECCHHHHHHHHHhccccccc------ccHHHhc-------ccccceecc
Confidence            6889999999954 45555555 45 4667777776654 55667765322      1222221       136999999


Q ss_pred             ccCChHHHHHHHHhhcCCCEEEEEccCCCCccee---chHh-hhcCcE-EEEeecCCCcHHHHHHHHHcCCC
Q 018075          258 CVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVA---LTPA-AAREVD-VIGIFRYRSTWPLCIEFLRSGKI  324 (361)
Q Consensus       258 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~---~~~~-~~~~~~-i~~~~~~~~~~~~~~~~l~~g~~  324 (361)
                      ++....+.+.+..++..|=. +.+.-+.....-.   +... -.++.. ..++..+...+.++.+.+..|++
T Consensus        69 ~tp~~~H~~~~~~al~~gk~-V~~EKP~~~~~~e~~~l~~~a~~~~~~~~vg~~r~~~~~~~~~~~~~~G~i  139 (167)
T d1xeaa1          69 HAATDVHSTLAAFFLHLGIP-TFVDKPLAASAQECENLYELAEKHHQPLYVGFNGFDAMVQDWLQVAAAGKL  139 (167)
T ss_dssp             CSCGGGHHHHHHHHHHTTCC-EEEESCSCSSHHHHHHHHHHHHHTTCCEEEECGTHHHHHHHHHHHHHHTCC
T ss_pred             cccccccccccccccccccc-cccCCCCcCCHHHHHHHHHHHHHcCCEEEEEeCcCCHHHHHHHHHhhcCCC
Confidence            99988889999999987755 5555333221111   1111 122222 33433223446677788888887

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=95.07  E-value=0.048  Score=44.68  Aligned_cols=103  Identities=14%  Similarity=0.013  Sum_probs=67.8

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcC-CCEEeecCCCccchhHHHHHHHhhcC
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG-ADETAKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg-~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      ++.....++.+||=+|||. |..+..+++..+. .|.+++.+++-.+.+++.- ....+.+..  .+..+    +. ...
T Consensus        86 l~~l~~~~~~~vLD~GcG~-G~~t~~ll~~~~~-~v~~vD~s~~~l~~a~~~~~~~~~~~~~~--~d~~~----~~-~~~  156 (254)
T d1xtpa_          86 IASLPGHGTSRALDCGAGI-GRITKNLLTKLYA-TTDLLEPVKHMLEEAKRELAGMPVGKFIL--ASMET----AT-LPP  156 (254)
T ss_dssp             HHTSTTCCCSEEEEETCTT-THHHHHTHHHHCS-EEEEEESCHHHHHHHHHHTTTSSEEEEEE--SCGGG----CC-CCS
T ss_pred             HhhCCCCCCCeEEEecccC-ChhhHHHHhhcCc-eEEEEcCCHHHHHhhhccccccccceeEE--ccccc----cc-cCC
Confidence            4455567788999999887 8888888876655 7999999999888887643 212122111  11111    10 124


Q ss_pred             CCccEEEEccCC-----h---HHHHHHHHhhcCCCEEEEEc
Q 018075          250 SGIDVSFDCVGF-----D---KTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       250 ~~~d~vld~~g~-----~---~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ..||+|+....-     +   ..++.+.+.|+|+|.++...
T Consensus       157 ~~fD~I~~~~vl~hl~d~d~~~~l~~~~~~LkpgG~iii~e  197 (254)
T d1xtpa_         157 NTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKE  197 (254)
T ss_dssp             SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             CccceEEeeccccccchhhhHHHHHHHHHhcCCCcEEEEEe
Confidence            679999874321     1   35778888999999998764

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=95.05  E-value=0.024  Score=45.56  Aligned_cols=96  Identities=15%  Similarity=0.068  Sum_probs=62.5

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCcc
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      .+..++.+||=+|||. |..+..+++ .|. .|++++.+++..+.+++...+.+.....   ++..    +.  ....||
T Consensus        16 ~~~~~~~~VLDiGcG~-G~~~~~l~~-~g~-~v~giD~s~~~i~~a~~~~~~~~~~~~~---~~~~----~~--~~~~fD   83 (225)
T d2p7ia1          16 TPFFRPGNLLELGSFK-GDFTSRLQE-HFN-DITCVEASEEAISHAQGRLKDGITYIHS---RFED----AQ--LPRRYD   83 (225)
T ss_dssp             GGGCCSSCEEEESCTT-SHHHHHHTT-TCS-CEEEEESCHHHHHHHHHHSCSCEEEEES---CGGG----CC--CSSCEE
T ss_pred             hhhCCCCcEEEEeCCC-cHHHHHHHH-cCC-eEEEEeCcHHHhhhhhcccccccccccc---cccc----cc--cccccc
Confidence            4456678999999877 777777765 577 5999999999999888754332221111   2111    11  246799


Q ss_pred             EEEEcc-----CCh-HHHHHHH-HhhcCCCEEEEE
Q 018075          254 VSFDCV-----GFD-KTMSTAL-NATRPGGKVCLI  281 (361)
Q Consensus       254 ~vld~~-----g~~-~~~~~~~-~~l~~~G~~v~~  281 (361)
                      +|+..-     ..+ ..+..+. ++|+|||.++..
T Consensus        84 ~I~~~~vleh~~d~~~~l~~i~~~~Lk~gG~l~i~  118 (225)
T d2p7ia1          84 NIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLV  118 (225)
T ss_dssp             EEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEE
T ss_pred             cccccceeEecCCHHHHHHHHHHHhcCCCceEEEE
Confidence            997632     222 2455666 679999999874

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.05  E-value=0.1  Score=43.41  Aligned_cols=101  Identities=24%  Similarity=0.301  Sum_probs=55.8

Q ss_pred             EE-EEEC-CCHHHHHHHHHHHHcCCCEEE--EEeCChhH----HHHHHHcCC---C-EEeecC-CCccchhHHHHHHHhh
Q 018075          181 NV-MIMG-SGPIGLVTLLAARAFGAPRII--ITDVDVQR----LSIARNLGA---D-ETAKVS-TDIEDVDTDVGKIQNA  247 (361)
Q Consensus       181 ~v-lI~G-~g~~G~~ai~la~~~g~~~vv--~v~~~~~~----~~~~~~lg~---~-~~~~~~-~~~~~~~~~~~~~~~~  247 (361)
                      +| ||.| ++++|.+.+..+...|++.+.  .+.++.++    .+.++++..   . ..+..+ ++..+......++   
T Consensus         3 kVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~---   79 (285)
T d1jtva_           3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERV---   79 (285)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTC---
T ss_pred             CEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhc---
Confidence            45 5668 589999999988889986332  23333332    234444432   1 112111 2222333332222   


Q ss_pred             cCCCccEEEEccCCh----------H---------------HHHHHHHhh--cCCCEEEEEccC
Q 018075          248 MGSGIDVSFDCVGFD----------K---------------TMSTALNAT--RPGGKVCLIGLA  284 (361)
Q Consensus       248 ~~~~~d~vld~~g~~----------~---------------~~~~~~~~l--~~~G~~v~~g~~  284 (361)
                      ..+.+|+++++.|..          +               ..+..+..|  +.+|+++.++..
T Consensus        80 ~~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~  143 (285)
T d1jtva_          80 TEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSV  143 (285)
T ss_dssp             TTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEG
T ss_pred             cccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEech
Confidence            346799999988654          1               334445555  457999988743

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=95.05  E-value=0.071  Score=43.97  Aligned_cols=84  Identities=13%  Similarity=0.117  Sum_probs=52.5

Q ss_pred             CCCCEEEEECC-C--HHHHHHHHHHHHcCCCEEEEEeCChhHHHHH----HHcCCCEEeecC-CCccchhHHHHHHHhhc
Q 018075          177 GPETNVMIMGS-G--PIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADETAKVS-TDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       177 ~~g~~vlI~G~-g--~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~~~~~-~~~~~~~~~~~~~~~~~  248 (361)
                      -+|.++||.|+ |  ++|.+.++.+...|+ .|+.++++++..+.+    ++.+.......+ ....+..+.+.++.+ .
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga-~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~   80 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKK-D   80 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH-H
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHH-H
Confidence            46899999984 5  799999999999999 577887776433232    223322222211 233344444444443 2


Q ss_pred             CCCccEEEEccCCh
Q 018075          249 GSGIDVSFDCVGFD  262 (361)
Q Consensus       249 ~~~~d~vld~~g~~  262 (361)
                      -+++|+++.+.|..
T Consensus        81 ~g~id~lV~nag~~   94 (274)
T d2pd4a1          81 LGSLDFIVHSVAFA   94 (274)
T ss_dssp             TSCEEEEEECCCCC
T ss_pred             cCCCCeEEeecccc
Confidence            45799999988743

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.95  E-value=0.06  Score=45.01  Aligned_cols=99  Identities=21%  Similarity=0.249  Sum_probs=66.0

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCC--------CEEeecCCCccchhHHHHHHHhhc
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA--------DETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~--------~~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      ...++|||+|.|. |.++-.+++..+...+..++-+++-.+.++++-.        ..+..+   ..|..+.+++   ..
T Consensus        79 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~---~~Da~~~l~~---~~  151 (290)
T d1xj5a_          79 PNPKKVLVIGGGD-GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLV---IGDGVAFLKN---AA  151 (290)
T ss_dssp             SCCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEE---ESCHHHHHHT---SC
T ss_pred             CCCcceEEecCCc-hHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEE---EccHHHHHhh---cc
Confidence            4558999998655 5566678887787789999999998888887431        111111   1233333332   23


Q ss_pred             CCCccEEEEccCC----------hHHHHHHHHhhcCCCEEEEEc
Q 018075          249 GSGIDVSFDCVGF----------DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       249 ~~~~d~vld~~g~----------~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ...+|+||--...          .+.++.+-++|+++|.++.-.
T Consensus       152 ~~~yDvIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~  195 (290)
T d1xj5a_         152 EGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA  195 (290)
T ss_dssp             TTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             ccCccEEEEcCCCCCCcchhhCCHHHHHHHHHhcCCCcEEEEec
Confidence            4589988753321          247889999999999998743

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.90  E-value=0.1  Score=40.15  Aligned_cols=92  Identities=14%  Similarity=0.104  Sum_probs=61.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHc-CCCEEEEEeCChhHH-HHHHHcCCCEEe-ecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          181 NVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRL-SIARNLGADETA-KVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~-g~~~vv~v~~~~~~~-~~~~~lg~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      ++.|+|+|.+|...+..++.. +++.+...+.++++. +++++++..... .+    .++.+.+.      ...+|+|+-
T Consensus         3 ki~iIG~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~----~~~~~ll~------~~~iD~v~I   72 (184)
T d1ydwa1           3 RIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIH----GSYESLLE------DPEIDALYV   72 (184)
T ss_dssp             EEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEE----SSHHHHHH------CTTCCEEEE
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceeec----CcHHHhhh------ccccceeee
Confidence            678999999998888877776 564333446777664 455667643211 11    23333321      357999999


Q ss_pred             ccCChHHHHHHHHhhcCCCEEEEEcc
Q 018075          258 CVGFDKTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       258 ~~g~~~~~~~~~~~l~~~G~~v~~g~  283 (361)
                      ++....+++.+..++..|=. +.+.-
T Consensus        73 ~tp~~~h~~~~~~~l~~g~~-v~~EK   97 (184)
T d1ydwa1          73 PLPTSLHVEWAIKAAEKGKH-ILLEK   97 (184)
T ss_dssp             CCCGGGHHHHHHHHHTTTCE-EEECS
T ss_pred             cccchhhcchhhhhhhccce-eeccc
Confidence            99988899999999987654 44543

>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Bacillus subtilis [TaxId: 1423]

Probab=94.82  E-value=0.018  Score=47.94  Aligned_cols=98  Identities=14%  Similarity=0.137  Sum_probs=66.8

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcC-----C--C-EEeecCCCccchhHHHHHHHhhc
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG-----A--D-ETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg-----~--~-~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      ...++|||+|.|. |..+-.+++..+..++..++-+++-.+.++++-     +  + .+...   ..|....+++    .
T Consensus        74 ~~p~~vLiiGgG~-G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~---~~D~~~~l~~----~  145 (274)
T d1iy9a_          74 PNPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQ---VDDGFMHIAK----S  145 (274)
T ss_dssp             SSCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEE---ESCSHHHHHT----C
T ss_pred             CCcceEEecCCCC-cHHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEE---echHHHHHhh----c
Confidence            4568999998766 566777788777778999999999888887752     1  1 11111   1233334432    3


Q ss_pred             CCCccEEEEccC----------ChHHHHHHHHhhcCCCEEEEEc
Q 018075          249 GSGIDVSFDCVG----------FDKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       249 ~~~~d~vld~~g----------~~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      +.++|+|+--..          +.+.++.+.++|+++|.++.-.
T Consensus       146 ~~~yDvIi~D~~~p~~~~~~L~t~eFy~~~~~~L~~~Gv~v~q~  189 (274)
T d1iy9a_         146 ENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT  189 (274)
T ss_dssp             CSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCCCEEEEcCCCCCCcchhhccHHHHHHHHhhcCCCceEEEec
Confidence            568999975332          2256888999999999988643

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=94.76  E-value=0.041  Score=44.88  Aligned_cols=81  Identities=17%  Similarity=0.305  Sum_probs=49.5

Q ss_pred             CEEEEEC-CCHHHHHHHHHH-H--HcCCCEEEEEeCChhHHHHHHHc---CCC-EEeecC-CCccchhHHHHHHHhh-cC
Q 018075          180 TNVMIMG-SGPIGLVTLLAA-R--AFGAPRIIITDVDVQRLSIARNL---GAD-ETAKVS-TDIEDVDTDVGKIQNA-MG  249 (361)
Q Consensus       180 ~~vlI~G-~g~~G~~ai~la-~--~~g~~~vv~v~~~~~~~~~~~~l---g~~-~~~~~~-~~~~~~~~~~~~~~~~-~~  249 (361)
                      .+|||.| ++++|.+.++.+ +  ..|+ .|+.+.+++++.+.++++   +.. ..+..+ ++.++..+...++... ..
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            4799998 589999887654 3  3577 678888888765544432   221 222222 2334555555554322 24


Q ss_pred             CCccEEEEccCC
Q 018075          250 SGIDVSFDCVGF  261 (361)
Q Consensus       250 ~~~d~vld~~g~  261 (361)
                      .++|+++++.|.
T Consensus        82 ~~iDiLvnNAg~   93 (248)
T d1snya_          82 QGLNVLFNNAGI   93 (248)
T ss_dssp             GCCSEEEECCCC
T ss_pred             CCcceEEeeccc
Confidence            579999998774

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=94.75  E-value=0.022  Score=46.70  Aligned_cols=97  Identities=21%  Similarity=0.212  Sum_probs=61.3

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCC-EEeecCCCccchhHHHHHHHhhcCC
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGAD-ETAKVSTDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~  250 (361)
                      ++++++||=+|||. |..+..+++. |...|+++|.+++..+.|++    .+.. .+.-...   +.....  +  ....
T Consensus        22 ~~~~~~VLDlGCG~-G~~~~~~~~~-~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~---D~~~~~--~--~~~~   92 (252)
T d1ri5a_          22 TKRGDSVLDLGCGK-GGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQ---DSYGRH--M--DLGK   92 (252)
T ss_dssp             CCTTCEEEEETCTT-TTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEES---CTTTSC--C--CCSS
T ss_pred             CCCcCEEEEecccC-cHHHHHHHHc-CCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEc---chhhhc--c--cccc
Confidence            57999999999876 6667777775 55479999999998877764    3322 1111111   100000  0  0145


Q ss_pred             CccEEEEccCC------h----HHHHHHHHhhcCCCEEEEE
Q 018075          251 GIDVSFDCVGF------D----KTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       251 ~~d~vld~~g~------~----~~~~~~~~~l~~~G~~v~~  281 (361)
                      .||+|+....-      .    ..+..+.+.|+|||+++..
T Consensus        93 ~fD~V~~~~~l~~~~~~~~~~~~~l~~i~~~Lk~gG~~i~~  133 (252)
T d1ri5a_          93 EFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMT  133 (252)
T ss_dssp             CEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred             cceEEEEcceeeecCCCHHHHHHHHHHHhceeCCCCEEEEE
Confidence            79999874332      1    2456677899999998864

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.72  E-value=0.24  Score=36.54  Aligned_cols=39  Identities=23%  Similarity=0.446  Sum_probs=32.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhH
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQR  215 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~  215 (361)
                      ..+.+|.|+|+|.+|...+..+...+ ++.++-+|.++++
T Consensus         4 ~~~~KI~IiGaG~vG~~~a~~l~~~~l~~el~L~Di~~~~   43 (148)
T d1ldna1           4 NGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESK   43 (148)
T ss_dssp             TTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred             CCCCeEEEECcCHHHHHHHHHHHhcCCCceEEEEeecccc
Confidence            45679999999999999888887776 4568889988876

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.71  E-value=0.03  Score=44.81  Aligned_cols=98  Identities=13%  Similarity=0.113  Sum_probs=64.8

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCC----CEEeecCCCccchhHHHHHHHhhcCC
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA----DETAKVSTDIEDVDTDVGKIQNAMGS  250 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~----~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (361)
                      ...++.+||-+|||. |..+..+++..+. .|++++.+++-.+.+++.-.    ..+--...   +..+    +. ....
T Consensus        57 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~---d~~~----~~-~~~~  126 (222)
T d2ex4a1          57 NKTGTSCALDCGAGI-GRITKRLLLPLFR-EVDMVDITEDFLVQAKTYLGEEGKRVRNYFCC---GLQD----FT-PEPD  126 (222)
T ss_dssp             -CCCCSEEEEETCTT-THHHHHTTTTTCS-EEEEEESCHHHHHHHHHHTGGGGGGEEEEEEC---CGGG----CC-CCSS
T ss_pred             CCCCCCEEEEeccCC-CHhhHHHHHhcCC-EEEEeecCHHHhhccccccccccccccccccc---cccc----cc-cccc
Confidence            456788999999887 7777777765555 79999999998888877432    12111111   2111    11 1246


Q ss_pred             CccEEEEc-----cCCh---HHHHHHHHhhcCCCEEEEEc
Q 018075          251 GIDVSFDC-----VGFD---KTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       251 ~~d~vld~-----~g~~---~~~~~~~~~l~~~G~~v~~g  282 (361)
                      .+|+|+..     +..+   ..+..+.+.|+|+|.++...
T Consensus       127 ~fD~I~~~~~l~h~~~~~~~~~l~~i~~~Lk~~G~~~i~~  166 (222)
T d2ex4a1         127 SYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKD  166 (222)
T ss_dssp             CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccccccccccccchhhhhhhHHHHHHHhcCCcceEEEEE
Confidence            79999873     2322   36778889999999999874

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.71  E-value=0.027  Score=47.25  Aligned_cols=98  Identities=18%  Similarity=0.159  Sum_probs=64.4

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCC--------CEEeecCCCccchhHHHHHHHhhc
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA--------DETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~--------~~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      ...++|||+|.|. |..+-.+++..+...|.+++-+++-.+.++++-.        ..+-..   ..|..+.+++    .
T Consensus        88 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~---~~Da~~~l~~----~  159 (295)
T d1inla_          88 PNPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIV---IANGAEYVRK----F  159 (295)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEE---ESCHHHHGGG----C
T ss_pred             CCCceEEEecCCc-hHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEE---hhhHHHHHhc----C
Confidence            3458999998655 4566677777777789999999998888877431        111111   1233333332    3


Q ss_pred             CCCccEEEEccC-----------ChHHHHHHHHhhcCCCEEEEEc
Q 018075          249 GSGIDVSFDCVG-----------FDKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       249 ~~~~d~vld~~g-----------~~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      +.++|+||--..           +.+.++.+.++|+++|.++.-.
T Consensus       160 ~~~yDvIi~D~~dp~~~~~~~L~t~efy~~~~~~L~~~Gi~v~q~  204 (295)
T d1inla_         160 KNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET  204 (295)
T ss_dssp             SSCEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             CCCCCEEEEcCCCCCcCchhhhccHHHHHHHHhhcCCCcEEEEec
Confidence            568999974221           1246778899999999888643

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=94.70  E-value=0.064  Score=45.48  Aligned_cols=100  Identities=13%  Similarity=0.023  Sum_probs=63.5

Q ss_pred             CCCCCCEEEEEC--CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCC--CEEeecCCCccchhHHHHHHHh
Q 018075          175 NVGPETNVMIMG--SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGA--DETAKVSTDIEDVDTDVGKIQN  246 (361)
Q Consensus       175 ~~~~g~~vlI~G--~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~--~~~~~~~~~~~~~~~~~~~~~~  246 (361)
                      .+.+|++||=..  +|+.++   ..+ ..|+..|++++.++...+.+++    .|.  +.+-.+   ..+..+.++....
T Consensus       141 ~~~~g~~VLdlf~~~G~~sl---~aa-~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i---~~d~~~~l~~~~~  213 (317)
T d2b78a2         141 GSAAGKTVLNLFSYTAAFSV---AAA-MGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLV---VMDVFDYFKYARR  213 (317)
T ss_dssp             TTTBTCEEEEETCTTTHHHH---HHH-HTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEE---ESCHHHHHHHHHH
T ss_pred             HhhCCCceeecCCCCcHHHH---HHH-hCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEE---EccHHHHHHHHHh
Confidence            467899999874  455554   333 4788889999999988877765    222  111111   1344455554433


Q ss_pred             hcCCCccEEEEccCC---------------hHHHHHHHHhhcCCCEEEEEc
Q 018075          247 AMGSGIDVSFDCVGF---------------DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       247 ~~~~~~d~vld~~g~---------------~~~~~~~~~~l~~~G~~v~~g  282 (361)
                       .+..||+||---..               ...+..+++.|+|||.++.+.
T Consensus       214 -~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pgG~l~~~s  263 (317)
T d2b78a2         214 -HHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIAST  263 (317)
T ss_dssp             -TTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             -hcCCCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence             25689999853221               125667888999999998764

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=94.69  E-value=0.011  Score=49.57  Aligned_cols=98  Identities=16%  Similarity=0.227  Sum_probs=66.4

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEeCChhHHHHHHHc----CCCEEeecCCCccchhHHHHHHHhhc
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      ..+.++.+||=+|||. |..+..+++..+. ..|+++|.+++..+.+++.    +.+.-.. ..   +..+    +.  .
T Consensus        23 ~~~~~~~~ILDiGcG~-G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~-~~---d~~~----~~--~   91 (281)
T d2gh1a1          23 WKITKPVHIVDYGCGY-GYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFL-EG---DATE----IE--L   91 (281)
T ss_dssp             SCCCSCCEEEEETCTT-THHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEE-ES---CTTT----CC--C
T ss_pred             hccCCcCEEEEecCcC-CHHHHHHHHhCCCCCEEEEEecchhHhhhhhccccccccccccc-cc---cccc----cc--c
Confidence            3577889999999986 8888899887642 3799999999877776653    3321111 11   1111    10  1


Q ss_pred             CCCccEEEEcc-----CCh-HHHHHHHHhhcCCCEEEEEc
Q 018075          249 GSGIDVSFDCV-----GFD-KTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       249 ~~~~d~vld~~-----g~~-~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ..++|+|+...     ..+ ..++.+.+.|+|||+++...
T Consensus        92 ~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~lii~~  131 (281)
T d2gh1a1          92 NDKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFE  131 (281)
T ss_dssp             SSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             cCCceEEEEehhhhcCCCHHHHHHHHHHHcCcCcEEEEEE
Confidence            35799998743     222 46888999999999998765

>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=94.60  E-value=0.059  Score=45.57  Aligned_cols=94  Identities=17%  Similarity=0.215  Sum_probs=64.2

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcC------C---C--EEeecCCCccchhHHHHHHH
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG------A---D--ETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg------~---~--~~~~~~~~~~~~~~~~~~~~  245 (361)
                      ...++|||+|.|. |..+-.+++......|.+++-+++-.+.+++.-      +   .  .++.     .|..+.+++  
T Consensus        76 ~~pk~VLiiG~G~-G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~-----~Da~~~l~~--  147 (312)
T d1uira_          76 PEPKRVLIVGGGE-GATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVI-----DDARAYLER--  147 (312)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEE-----SCHHHHHHH--
T ss_pred             CCcceEEEeCCCc-hHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEE-----chHHHHhhh--
Confidence            4568999998765 666777777776668999999999888887641      1   0  1111     344444433  


Q ss_pred             hhcCCCccEEEEcc----C---------ChHHHHHHHHhhcCCCEEEE
Q 018075          246 NAMGSGIDVSFDCV----G---------FDKTMSTALNATRPGGKVCL  280 (361)
Q Consensus       246 ~~~~~~~d~vld~~----g---------~~~~~~~~~~~l~~~G~~v~  280 (361)
                        .+.++|+||--.    +         +.+.++.+.++|+++|.++.
T Consensus       148 --~~~~yDvIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~Gvlv~  193 (312)
T d1uira_         148 --TEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGM  193 (312)
T ss_dssp             --CCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEE
T ss_pred             --cCCcccEEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCCceEEE
Confidence              357899997422    1         12467888999999998875

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.56  E-value=0.053  Score=45.20  Aligned_cols=99  Identities=14%  Similarity=0.165  Sum_probs=65.2

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCC--------CEEeecCCCccchhHHHHHHHhh
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA--------DETAKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~--------~~~~~~~~~~~~~~~~~~~~~~~  247 (361)
                      ....++|||+|.|. |..+-.+++..+..+++.++-+++-.+.++++-.        ..+-.+   ..|..+.+++    
T Consensus        76 ~~~pk~vLiiGgG~-G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~---~~Da~~~l~~----  147 (285)
T d2o07a1          76 HPNPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLH---VGDGFEFMKQ----  147 (285)
T ss_dssp             SSSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEE---ESCHHHHHHT----
T ss_pred             CcCcCeEEEeCCCc-hHHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEE---EccHHHHHhc----
Confidence            34568999998665 5566677787777789999999998888877421        111111   1243344432    


Q ss_pred             cCCCccEEEEccCCh----------HHHHHHHHhhcCCCEEEEEc
Q 018075          248 MGSGIDVSFDCVGFD----------KTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       248 ~~~~~d~vld~~g~~----------~~~~~~~~~l~~~G~~v~~g  282 (361)
                      ...++|+|+--...+          +.++.+-+.|+++|.++.-.
T Consensus       148 ~~~~yDvIi~D~~~p~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~  192 (285)
T d2o07a1         148 NQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG  192 (285)
T ss_dssp             CSSCEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred             CCCCCCEEEEcCCCCCCcccccccHHHHHHHHHhcCCCCeEEEec
Confidence            356899997533222          35777889999999988643

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=94.30  E-value=0.13  Score=40.20  Aligned_cols=88  Identities=19%  Similarity=0.168  Sum_probs=57.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      .|.+|.|+|.|.+|...+++++.+|+ .|++.+........  ..+..    .    .++.+.+        ...|++.-
T Consensus        42 ~gk~vgIiG~G~IG~~va~~l~~fg~-~V~~~d~~~~~~~~--~~~~~----~----~~l~~~l--------~~sDii~~  102 (197)
T d1j4aa1          42 RDQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDIFRNPELE--KKGYY----V----DSLDDLY--------KQADVISL  102 (197)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCHHHH--HTTCB----C----SCHHHHH--------HHCSEEEE
T ss_pred             cCCeEEEecccccchhHHHhHhhhcc-cccccCcccccccc--cceee----e----ccccccc--------cccccccc
Confidence            48999999999999999999999999 68888765443322  11211    0    1233322        24788887


Q ss_pred             ccCChH-----HHHHHHHhhcCCCEEEEEccC
Q 018075          258 CVGFDK-----TMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       258 ~~g~~~-----~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      +..-..     .-...++.|+++..+|-++..
T Consensus       103 ~~plt~~T~~li~~~~l~~mk~~a~lIN~sRG  134 (197)
T d1j4aa1         103 HVPDVPANVHMINDESIAKMKQDVVIVNVSRG  134 (197)
T ss_dssp             CSCCCGGGTTCBSHHHHHHSCTTEEEEECSCG
T ss_pred             cCCccccccccccHHHHhhhCCccEEEecCch
Confidence            664321     124567888888877665443

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=94.28  E-value=0.014  Score=44.29  Aligned_cols=93  Identities=12%  Similarity=0.038  Sum_probs=54.1

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccC
Q 018075          181 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG  260 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  260 (361)
                      +|+|+|+|.+|.+....+...|. .|..+++++++.+.....+............+..   ..+     ..+|++|-++-
T Consensus         2 kI~IiGaG~iG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----~~~D~iii~vk   72 (167)
T d1ks9a2           2 KITVLGCGALGQLWLTALCKQGH-EVQGWLRVPQPYCSVNLVETDGSIFNESLTANDP---DFL-----ATSDLLLVTLK   72 (167)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSEEEEEEECTTSCEEEEEEEESCH---HHH-----HTCSEEEECSC
T ss_pred             EEEEECcCHHHHHHHHHHHHCCC-ceEEEEcCHHHhhhhccccCCccccccccccchh---hhh-----cccceEEEeec
Confidence            68999999999998888888898 5777777765443222222211000000000111   111     36999999988


Q ss_pred             ChH---HHHHHHHhhcCCCEEEEEc
Q 018075          261 FDK---TMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       261 ~~~---~~~~~~~~l~~~G~~v~~g  282 (361)
                      ...   .++.+...+.++..++.+.
T Consensus        73 a~~~~~~~~~l~~~~~~~~~Iv~~q   97 (167)
T d1ks9a2          73 AWQVSDAVKSLASTLPVTTPILLIH   97 (167)
T ss_dssp             GGGHHHHHHHHHTTSCTTSCEEEEC
T ss_pred             ccchHHHHHhhccccCcccEEeecc
Confidence            652   2333444556677777663

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.25  E-value=0.022  Score=44.30  Aligned_cols=35  Identities=17%  Similarity=0.345  Sum_probs=29.9

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075          179 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  213 (361)
Q Consensus       179 g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~  213 (361)
                      +++|+|+|+|+.|+.++..++..|++.|..++.++
T Consensus         4 ~~kVaIIGaGpaGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           4 SAKIALLGAGPASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCEEEEECChHHHHHHHHHHHHCCCCeEEEEEecC
Confidence            58999999999999999999999995466676654

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.18  E-value=0.14  Score=38.06  Aligned_cols=85  Identities=13%  Similarity=0.176  Sum_probs=60.3

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH-HHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEcc
Q 018075          181 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSI-ARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV  259 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~-~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  259 (361)
                      ++.++|+|.+|.+.+.-....|. .++..+++.++.+. .+++|....    .   +..+.+        ...|+||-|+
T Consensus         2 kIg~IG~G~mG~al~~~l~~~~~-~i~v~~r~~~~~~~l~~~~g~~~~----~---~~~~~~--------~~~dvIilav   65 (152)
T d2ahra2           2 KIGIIGVGKMASAIIKGLKQTPH-ELIISGSSLERSKEIAEQLALPYA----M---SHQDLI--------DQVDLVILGI   65 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHTTSSC-EEEEECSSHHHHHHHHHHHTCCBC----S---SHHHHH--------HTCSEEEECS
T ss_pred             EEEEEeccHHHHHHHHHHHhCCC-eEEEEcChHHhHHhhccccceeee----c---hhhhhh--------hccceeeeec
Confidence            57889999999988886666677 57777788887665 466776432    1   222221        2589999999


Q ss_pred             CChHHHHHHHHhhcCCCEEEEEc
Q 018075          260 GFDKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       260 g~~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      - +..+.+.++.+.++..++.+.
T Consensus        66 k-p~~~~~vl~~l~~~~~iis~~   87 (152)
T d2ahra2          66 K-PQLFETVLKPLHFKQPIISMA   87 (152)
T ss_dssp             C-GGGHHHHHTTSCCCSCEEECC
T ss_pred             c-hHhHHHHhhhcccceeEeccc
Confidence            7 447888888898887776553

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.15  E-value=0.1  Score=41.54  Aligned_cols=105  Identities=19%  Similarity=0.280  Sum_probs=69.5

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhh
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAF--GAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~--g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~  247 (361)
                      .+....++||-+|++. |+.++.+|+.+  +. ++++++.+++..+.+++    .|....+...  .++..+.+.++...
T Consensus        55 ~~~~~~k~vLEiGt~~-GyStl~~a~al~~~g-~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~--~Gda~e~l~~~~~~  130 (219)
T d2avda1          55 ARLIQAKKALDLGTFT-GYSALALALALPADG-RVVTCEVDAQPPELGRPLWRQAEAEHKIDLR--LKPALETLDELLAA  130 (219)
T ss_dssp             HHHTTCCEEEEECCTT-SHHHHHHHTTSCTTC-EEEEEESCSHHHHHHHHHHHHTTCTTTEEEE--ESCHHHHHHHHHHT
T ss_pred             HHccCCCeEEEEechh-hHHHHHHHHhCCCCc-eEEEEeechhHHHHHHHHHHhcCccceEEEE--Eeehhhcchhhhhh
Confidence            3445678999999765 77788888876  34 79999999988766654    4543322211  23444555444322


Q ss_pred             -cCCCccEEEEccCCh---HHHHHHHHhhcCCCEEEEEc
Q 018075          248 -MGSGIDVSFDCVGFD---KTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       248 -~~~~~d~vld~~g~~---~~~~~~~~~l~~~G~~v~~g  282 (361)
                       ....||+||--....   ..++.+++.|++||.++.=.
T Consensus       131 ~~~~~fD~ifiD~dk~~y~~~~~~~~~lL~~GGvii~Dn  169 (219)
T d2avda1         131 GEAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLR  169 (219)
T ss_dssp             TCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred             cccCCccEEEEeCCHHHHHHHHHHHHHHhcCCcEEEEeC
Confidence             245799998754433   35778899999999887743

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=94.13  E-value=0.51  Score=35.18  Aligned_cols=90  Identities=16%  Similarity=0.146  Sum_probs=62.7

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEcc
Q 018075          180 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV  259 (361)
Q Consensus       180 ~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  259 (361)
                      .+|.++|.|.+|...+.-+...|. .|.+-++++++.+.+.+.+.....       +..+.        ....|+++-|+
T Consensus         2 ~kIg~IGlG~MG~~iA~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~~~~-------~~~e~--------~~~~diii~~v   65 (162)
T d3cuma2           2 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVAAGASAAR-------SARDA--------VQGADVVISML   65 (162)
T ss_dssp             CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCEECS-------SHHHH--------HTSCSEEEECC
T ss_pred             CEEEEEEEHHHHHHHHHHHHHCCC-eEEEEECchhhhhhhhhhhccccc-------hhhhh--------ccccCeeeecc
Confidence            368899999999988887777898 688899999999888888764321       11111        14578888888


Q ss_pred             CChHHHHHH-------HHhhcCCCEEEEEccCC
Q 018075          260 GFDKTMSTA-------LNATRPGGKVCLIGLAK  285 (361)
Q Consensus       260 g~~~~~~~~-------~~~l~~~G~~v~~g~~~  285 (361)
                      ......+..       ...+.++-.++.++...
T Consensus        66 ~~~~~~~~v~~~~~~~~~~l~~g~iiid~st~~   98 (162)
T d3cuma2          66 PASQHVEGLYLDDDGLLAHIAPGTLVLECSTIA   98 (162)
T ss_dssp             SCHHHHHHHHHSTTCHHHHSCTTCEEEECSCCC
T ss_pred             cchhhHHHHHhccccccccCCCCCEEEECCCCC
Confidence            877555544       33466666666665444

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=94.11  E-value=0.26  Score=37.37  Aligned_cols=100  Identities=18%  Similarity=0.144  Sum_probs=61.9

Q ss_pred             EEEEECCCHHHHHHHHHHHHcC-CCEEEEE-eCC-hhHHHHHHHcCCCEEeecCCCccchhH-------HHHHHHhhcCC
Q 018075          181 NVMIMGSGPIGLVTLLAARAFG-APRIIIT-DVD-VQRLSIARNLGADETAKVSTDIEDVDT-------DVGKIQNAMGS  250 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~g-~~~vv~v-~~~-~~~~~~~~~lg~~~~~~~~~~~~~~~~-------~~~~~~~~~~~  250 (361)
                      +|.|.|.|-+|..+...+...+ . .++++ +.+ ......+.+++.+...........+.+       ....+    -.
T Consensus         3 ~VgINGfGRIGR~v~R~l~~~~di-~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~----~~   77 (171)
T d1cf2o1           3 AVAINGYGTVGKRVADAIAQQDDM-KVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDM----LD   77 (171)
T ss_dssp             EEEEECCSHHHHHHHHHHHTSSSE-EEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHH----HH
T ss_pred             EEEEEcCcHHHHHHHHHHHhCCCc-eEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHh----hc
Confidence            6889999999999988776665 4 34444 333 344455566665543221110000000       00111    13


Q ss_pred             CccEEEEccCChHHHHHHHHhhcCCCEEEEEccCC
Q 018075          251 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       251 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~  285 (361)
                      ++|+|+||+|.-...+.+-.++..|-+++..+...
T Consensus        78 ~vDvViEcTG~f~~~~~~~~hl~~G~K~vi~~~~~  112 (171)
T d1cf2o1          78 EADIVIDCTPEGIGAKNLKMYKEKGIKAIFQGGEK  112 (171)
T ss_dssp             TCSEEEECCSTTHHHHHHHHHHHTTCEEEECTTSC
T ss_pred             CCCEEEEccCCCCCHHHHHHHHHcCCCEEEECCCC
Confidence            69999999998767777888999998988776544

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=94.09  E-value=0.13  Score=42.49  Aligned_cols=96  Identities=15%  Similarity=0.175  Sum_probs=61.3

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcC-C------------C-EEeecCCCccchhHHHH
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLG-A------------D-ETAKVSTDIEDVDTDVG  242 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg-~------------~-~~~~~~~~~~~~~~~~~  242 (361)
                      .+..+|||+|+|. |..+-.+++. +...+.+++-+++-.+.++++- .            + .+...   ..|....++
T Consensus        71 ~~p~~vLiiG~G~-G~~~~~~l~~-~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~---~~Da~~~l~  145 (276)
T d1mjfa_          71 PKPKRVLVIGGGD-GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLT---IGDGFEFIK  145 (276)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEE---ESCHHHHHH
T ss_pred             CCCceEEEecCCc-hHHHHHHHHh-CCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEE---EChHHHHHh
Confidence            5568999998654 4444555654 5558999999999888888732 1            1 11111   134434443


Q ss_pred             HHHhhcCCCccEEEEccCC----------hHHHHHHHHhhcCCCEEEEEc
Q 018075          243 KIQNAMGSGIDVSFDCVGF----------DKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       243 ~~~~~~~~~~d~vld~~g~----------~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      +     ..++|+||--...          .+.++.+.++|+++|.++.-.
T Consensus       146 ~-----~~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~Gv~v~q~  190 (276)
T d1mjfa_         146 N-----NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA  190 (276)
T ss_dssp             H-----CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred             c-----cCCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCCceEEEec
Confidence            2     4679999752221          246788999999999988643

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=94.06  E-value=0.37  Score=35.54  Aligned_cols=98  Identities=19%  Similarity=0.183  Sum_probs=63.5

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHc--CCCEEEEEeCChh---HHHHHHHcCCCEEeecCCCccchhHHHHHH---------
Q 018075          180 TNVMIMG-SGPIGLVTLLAARAF--GAPRIIITDVDVQ---RLSIARNLGADETAKVSTDIEDVDTDVGKI---------  244 (361)
Q Consensus       180 ~~vlI~G-~g~~G~~ai~la~~~--g~~~vv~v~~~~~---~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~---------  244 (361)
                      .+|.|+| +|.+|.-+.++.+..  .+ .|++......   -.+.+++|.+..+...+.  .........+         
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~--~~~~~l~~~~~~~~~~v~~   79 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRY-QVIALTANRNVKDLADAAKRTNAKRAVIADP--SLYNDLKEALAGSSVEAAA   79 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGE-EEEEEEESSCHHHHHHHHHHTTCSEEEESCG--GGHHHHHHHTTTCSSEEEE
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCc-EEEEEEeCCCHHHHHHHHHhhccccceeccH--HHHHHHHHHhhhccccccc
Confidence            6899999 599999999999886  46 5666655543   345667788888765432  1111111111         


Q ss_pred             -----HhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEE
Q 018075          245 -----QNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCL  280 (361)
Q Consensus       245 -----~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~  280 (361)
                           ......++|+++.+..+-..+...+..+..|-++.+
T Consensus        80 g~~~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~gk~iaL  120 (150)
T d1r0ka2          80 GADALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVAL  120 (150)
T ss_dssp             SHHHHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTTSEEEE
T ss_pred             CccchheecccccceeeeecCchhHHHHHHHHHhcCCEEEE
Confidence                 111134688888887666678888888888776544

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.03  E-value=0.14  Score=41.33  Aligned_cols=48  Identities=23%  Similarity=0.266  Sum_probs=38.3

Q ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHH-HHHHHcCCC
Q 018075          177 GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRL-SIARNLGAD  225 (361)
Q Consensus       177 ~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~-~~~~~lg~~  225 (361)
                      -+|+.+||.| ++++|.+.++-+...|+ .|+.+++++++. +.+++++..
T Consensus         3 lkGKvalITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~   52 (248)
T d2o23a1           3 VKGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGNN   52 (248)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCTT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCC
Confidence            3789999998 58999999999999999 678888777654 455667644

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=94.01  E-value=0.046  Score=38.52  Aligned_cols=38  Identities=29%  Similarity=0.563  Sum_probs=32.1

Q ss_pred             CCCC-CEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChh
Q 018075          176 VGPE-TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ  214 (361)
Q Consensus       176 ~~~g-~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~  214 (361)
                      +.++ .+|.|+|+|.+|.+.++-|+.+|. .+++.+.+++
T Consensus         7 ~~~~~~kigIlGgGQL~rMla~aA~~lG~-~v~v~d~~~~   45 (111)
T d1kjqa2           7 LRPAATRVMLLGSGELGKEVAIECQRLGV-EVIAVDRYAD   45 (111)
T ss_dssp             TSTTCCEEEEESCSHHHHHHHHHHHTTTC-EEEEEESSTT
T ss_pred             CCCCCCEEEEEeCCHHHHHHHHHHHHCCC-EEEEEcCCCC
Confidence            4454 569999999999999999999999 6788887665

>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Possible histamine N-methyltransferase TM1293
species: Thermotoga maritima [TaxId: 2336]

Probab=93.99  E-value=0.068  Score=42.01  Aligned_cols=90  Identities=17%  Similarity=0.168  Sum_probs=60.8

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      +.++.+||=+|||. |..+..++      .++++|.+++..+.+++.+...... +.  .+..        .....||+|
T Consensus        34 ~~~~~~vLDiGcG~-G~~~~~~~------~~~giD~s~~~~~~a~~~~~~~~~~-d~--~~l~--------~~~~~fD~I   95 (208)
T d1vlma_          34 LLPEGRGVEIGVGT-GRFAVPLK------IKIGVEPSERMAEIARKRGVFVLKG-TA--ENLP--------LKDESFDFA   95 (208)
T ss_dssp             HCCSSCEEEETCTT-STTHHHHT------CCEEEESCHHHHHHHHHTTCEEEEC-BT--TBCC--------SCTTCEEEE
T ss_pred             hCCCCeEEEECCCC-cccccccc------eEEEEeCChhhcccccccccccccc-cc--cccc--------ccccccccc
Confidence            46778999999874 65554442      3589999999999999876543322 11  1111        124679999


Q ss_pred             EEcc-----CCh-HHHHHHHHhhcCCCEEEEEcc
Q 018075          256 FDCV-----GFD-KTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       256 ld~~-----g~~-~~~~~~~~~l~~~G~~v~~g~  283 (361)
                      +...     ..+ ..++.+.+.|+|||+++....
T Consensus        96 ~~~~~l~h~~d~~~~l~~~~~~L~pgG~l~i~~~  129 (208)
T d1vlma_          96 LMVTTICFVDDPERALKEAYRILKKGGYLIVGIV  129 (208)
T ss_dssp             EEESCGGGSSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ccccccccccccccchhhhhhcCCCCceEEEEec
Confidence            8743     222 367889999999999988654

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=93.98  E-value=0.11  Score=42.25  Aligned_cols=103  Identities=14%  Similarity=0.159  Sum_probs=64.2

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHH----HHHHcCCCEEeecCCCccchhHHHHHHHh
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLS----IARNLGADETAKVSTDIEDVDTDVGKIQN  246 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~----~~~~lg~~~~~~~~~~~~~~~~~~~~~~~  246 (361)
                      +....+.+..+||=+|||. |..++.+++...--.+++++.++ ..+    .+.+.+...-+....  .++.+       
T Consensus        73 ~~~~d~~~~~~VLDvGcG~-G~~~~~la~~~p~~~~~~~D~~~-~~~~a~~~~~~~~~~~rv~~~~--~D~~~-------  141 (253)
T d1tw3a2          73 AAAYDWTNVRHVLDVGGGK-GGFAAAIARRAPHVSATVLEMAG-TVDTARSYLKDEGLSDRVDVVE--GDFFE-------  141 (253)
T ss_dssp             HHHSCCTTCSEEEEETCTT-SHHHHHHHHHCTTCEEEEEECTT-HHHHHHHHHHHTTCTTTEEEEE--CCTTS-------
T ss_pred             HhhcCCccCCEEEEeCCCC-CHHHHHHHHhcceeEEEEccCHH-HHHHHHHHHHHhhcccchhhcc--ccchh-------
Confidence            3446677889999999886 88999999988543788888643 333    333344321111111  12211       


Q ss_pred             hcCCCccEEEEcc-----CCh---HHHHHHHHhhcCCCEEEEEccC
Q 018075          247 AMGSGIDVSFDCV-----GFD---KTMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       247 ~~~~~~d~vld~~-----g~~---~~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      ..+.++|+|+-..     +.+   ..++.+.+.|+|||++++....
T Consensus       142 ~~~~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkPGG~l~i~e~~  187 (253)
T d1tw3a2         142 PLPRKADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD  187 (253)
T ss_dssp             CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred             hcccchhheeeccccccCCchhhHHHHHHHHHhcCCCcEEEEEecc
Confidence            1245799998532     212   3578889999999999987643

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=93.91  E-value=0.13  Score=42.02  Aligned_cols=85  Identities=22%  Similarity=0.377  Sum_probs=52.6

Q ss_pred             CCCCCEEEEECC-C--HHHHHHHHHHHHcCCCEEEEEeCChhHH-H-HHHHcCCCE-Eeec-CCCccchhHHHHHHHhh-
Q 018075          176 VGPETNVMIMGS-G--PIGLVTLLAARAFGAPRIIITDVDVQRL-S-IARNLGADE-TAKV-STDIEDVDTDVGKIQNA-  247 (361)
Q Consensus       176 ~~~g~~vlI~G~-g--~~G~~ai~la~~~g~~~vv~v~~~~~~~-~-~~~~lg~~~-~~~~-~~~~~~~~~~~~~~~~~-  247 (361)
                      .-+|.++||.|+ |  ++|.+.++-+...|+ .|+.+.++.++. + ..++++... .+.. ..+..+.......+.+. 
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga-~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~   81 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAI   81 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhcc
Confidence            457899999983 4  599999988888999 577777766654 3 445555332 1111 12223333444444322 


Q ss_pred             -cCCCccEEEEccCC
Q 018075          248 -MGSGIDVSFDCVGF  261 (361)
Q Consensus       248 -~~~~~d~vld~~g~  261 (361)
                       ...++|+++++.|.
T Consensus        82 ~~~~~ld~~i~~ag~   96 (268)
T d2h7ma1          82 GAGNKLDGVVHSIGF   96 (268)
T ss_dssp             CTTCCEEEEEECCCC
T ss_pred             ccCCCcceeeecccc
Confidence             23568999998873

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.87  E-value=0.62  Score=39.75  Aligned_cols=114  Identities=22%  Similarity=0.306  Sum_probs=75.6

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEE--eCChhHHHHHHHcCCCEEeecCC----------------
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIIT--DVDVQRLSIARNLGADETAKVST----------------  232 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v--~~~~~~~~~~~~lg~~~~~~~~~----------------  232 (361)
                      .+...+++++.|+...+|..|.+++..|+.+|.+.++.+  ..+++|.+.++.+|++.+.....                
T Consensus        89 ~~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~~~GA~vv~v~~~~~~~~~~~~~~~~~~~  168 (355)
T d1jbqa_          89 ERDGTLKPGDTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRL  168 (355)
T ss_dssp             HHHTCSCTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CCHHHHHHHH
T ss_pred             HHcCCcccCceEEEecccchhhHHHHHHHhccCCeEEEeeccchHHHHHHHHhcCCeEEEecccccchhhhhhhhHHHHH
Confidence            344667788877777789999999999999999655555  34567889999999875432100                


Q ss_pred             ------------Ccc------chhHHHHHHHhhcCCCccEEEEccCChHHHHHH---HHhhcCCCEEEEEccC
Q 018075          233 ------------DIE------DVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTA---LNATRPGGKVCLIGLA  284 (361)
Q Consensus       233 ------------~~~------~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~---~~~l~~~G~~v~~g~~  284 (361)
                                  ...      .......++..+.+..+|.++-++|+..++.-+   ++...+.-+++.+...
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~~kii~vep~  241 (355)
T d1jbqa_         169 KNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDPE  241 (355)
T ss_dssp             HHHSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEET
T ss_pred             HHhccccccccccCcccchhhhcccchhhhhhhcCCCCCeeEecccCCchHHHHHHHHhhcCCcceEEeeccc
Confidence                        000      011112234444455699999999987655444   4455778888887643

>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=93.76  E-value=0.22  Score=41.33  Aligned_cols=99  Identities=17%  Similarity=0.209  Sum_probs=60.6

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH----HHcCCCEEeecCCCccchhHHHHHHHhhcC
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA----RNLGADETAKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      ...++|++||=+.|++=|- +.+++..+.-..+++++.++.|...+    +.+|...+.....+ ......      ...
T Consensus        98 L~~~~g~~vLD~CAaPGgK-t~~la~l~~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~~-~~~~~~------~~~  169 (284)
T d1sqga2          98 LAPQNGEHILDLCAAPGGK-TTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDG-RYPSQW------CGE  169 (284)
T ss_dssp             HCCCTTCEEEEESCTTCHH-HHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCT-TCTHHH------HTT
T ss_pred             cCccccceeEeccCccccc-hhhhhhhhhhhhhhhhhcchhhhhhHhhhhhcccccceeeeccc-cccchh------ccc
Confidence            4689999999885443222 23444444334799999999886544    55787654433221 111111      124


Q ss_pred             CCccEEEE---ccCCh-------------------------HHHHHHHHhhcCCCEEEE
Q 018075          250 SGIDVSFD---CVGFD-------------------------KTMSTALNATRPGGKVCL  280 (361)
Q Consensus       250 ~~~d~vld---~~g~~-------------------------~~~~~~~~~l~~~G~~v~  280 (361)
                      ..||.||-   |+|..                         ..+..+++.|++||++|-
T Consensus       170 ~~fd~IL~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk~gG~lvY  228 (284)
T d1sqga2         170 QQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVY  228 (284)
T ss_dssp             CCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred             ccccEEEEeccccccCccccccchhhccccchhhHHHHHHHHHHHHHHHhcCCCceEEE
Confidence            67998864   66654                         256667778899998874

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=93.76  E-value=0.062  Score=41.71  Aligned_cols=40  Identities=15%  Similarity=0.328  Sum_probs=33.5

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH
Q 018075          179 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA  219 (361)
Q Consensus       179 g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~  219 (361)
                      =++|.|+|+|.+|...+.++...|. .|+..+.+++..+.+
T Consensus         4 I~~vaViGaG~mG~~iA~~~a~~G~-~V~l~D~~~~~l~~~   43 (186)
T d1wdka3           4 VKQAAVLGAGIMGGGIAYQSASKGT-PILMKDINEHGIEQG   43 (186)
T ss_dssp             CSSEEEECCHHHHHHHHHHHHHTTC-CEEEECSSHHHHHHH
T ss_pred             CCEEEEECcCHHHHHHHHHHHhCCC-eEEEEECCHHHHhhh
Confidence            3679999999999999888888999 588999998765543

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=93.63  E-value=0.16  Score=38.87  Aligned_cols=99  Identities=16%  Similarity=0.051  Sum_probs=58.8

Q ss_pred             EEEEECCCHHHHHHHHHHHHcC-CCEEEEE-eCCh-hHHHHHHHcCCCEEeecCCCccch-------hHHHHHHHhhcCC
Q 018075          181 NVMIMGSGPIGLVTLLAARAFG-APRIIIT-DVDV-QRLSIARNLGADETAKVSTDIEDV-------DTDVGKIQNAMGS  250 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~g-~~~vv~v-~~~~-~~~~~~~~lg~~~~~~~~~~~~~~-------~~~~~~~~~~~~~  250 (361)
                      +|.|.|.|-+|...+..+.... . .++++ +..+ .....+...+....... .....+       ...+...    ..
T Consensus         3 KVaINGfGRIGR~v~Ral~~~~di-evVaInd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~v~g~~~~~----~~   76 (178)
T d1b7go1           3 NVAVNGYGTIGKRVADAIIKQPDM-KLVGVAKTSPNYEAFIAHRRGIRIYVPQ-QSIKKFEESGIPVAGTVEDL----IK   76 (178)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTE-EEEEEECSSCSHHHHHHHHTTCCEECCG-GGHHHHHTTTCCCCCCHHHH----HH
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCC-EEEEEECCCCcHHHHHhcccCcceeccC-ccceeccccceecCCchhhh----hh
Confidence            6889999999999999887664 5 45555 3333 33444444443221110 000000       0000111    12


Q ss_pred             CccEEEEccCChHHHHHHHHhhcCCCEEEEEccCC
Q 018075          251 GIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       251 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~  285 (361)
                      ++|+|+||+|.-...+.+-.++..|-+++..+...
T Consensus        77 ~vDiViecTG~f~~~e~a~~hl~~G~KvIi~~~~~  111 (178)
T d1b7go1          77 TSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGGEK  111 (178)
T ss_dssp             HCSEEEECCSTTHHHHHHHHHHHTTCEEEECTTSC
T ss_pred             cCCEEEECCCCcCCHHHHHHHHHcCCEEEEECCCC
Confidence            68999999998767777888888887888765443

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.53  E-value=0.22  Score=40.51  Aligned_cols=82  Identities=12%  Similarity=0.073  Sum_probs=47.1

Q ss_pred             CCCEEEEEC-CCHHHHHHHH-HHHH--cCCCEEEEEeCChhHHHHH-HHc---C-CCEEe--ecC-CCccchhHHHHHHH
Q 018075          178 PETNVMIMG-SGPIGLVTLL-AARA--FGAPRIIITDVDVQRLSIA-RNL---G-ADETA--KVS-TDIEDVDTDVGKIQ  245 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~-la~~--~g~~~vv~v~~~~~~~~~~-~~l---g-~~~~~--~~~-~~~~~~~~~~~~~~  245 (361)
                      .|+.++|.| ++++|.+.++ ||+.  .|+ .|+.+++++++.+.+ +++   + -..+.  ..+ ++.++..+.+..+.
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~   83 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVR   83 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCC-EEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            456677788 5899998776 5553  588 688888988876544 323   1 11221  111 22233334444333


Q ss_pred             hh---cCCCccEEEEccC
Q 018075          246 NA---MGSGIDVSFDCVG  260 (361)
Q Consensus       246 ~~---~~~~~d~vld~~g  260 (361)
                      +.   .....|+++++.|
T Consensus        84 ~~~~~~~~~~~~lvnnag  101 (259)
T d1oaaa_          84 ELPRPEGLQRLLLINNAA  101 (259)
T ss_dssp             HSCCCTTCCEEEEEECCC
T ss_pred             HhhhhccCceEEEEeccc
Confidence            32   2346788888765

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=93.50  E-value=0.22  Score=40.21  Aligned_cols=34  Identities=24%  Similarity=0.433  Sum_probs=30.5

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075          179 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  212 (361)
Q Consensus       179 g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~  212 (361)
                      +.+|+|+|+|++|..+++.+...|...+..+|.+
T Consensus        30 ~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          30 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             CCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCc
Confidence            4799999999999999999999999999998743

>d1ixka_ c.66.1.38 (A:) Hypothetical methyltransferase PH1374 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Hypothetical methyltransferase PH1374
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.22  E-value=0.36  Score=40.50  Aligned_cols=99  Identities=22%  Similarity=0.292  Sum_probs=62.6

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEeCChhHHHHH----HHcCCCEEeecCCCccchhHHHHHHHhh
Q 018075          173 RANVGPETNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLSIA----RNLGADETAKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       173 ~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~-~~vv~v~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~~~~~~~~  247 (361)
                      ..++++|++||=+-|++ |-=+.+++..++- ..+++.+.++.|...+    +.+|...++....+...+.        .
T Consensus       111 ~l~~~~g~~vlD~CAap-GgKt~~l~~~~~~~~~i~a~d~~~~r~~~l~~~~~r~~~~~i~~~~~d~~~~~--------~  181 (313)
T d1ixka_         111 ALDPKPGEIVADMAAAP-GGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIG--------E  181 (313)
T ss_dssp             HHCCCTTCEEEECCSSC-SHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGG--------G
T ss_pred             cccCCccceeeecccch-hhhhHhhhhhcccccceeeeccCHHHHHHHHHHHHHHHhhccccccccccccc--------c
Confidence            45789999998875443 3334455555542 2589999999887554    5577776655443322111        1


Q ss_pred             cCCCccEEEE---ccCCh-------------------------HHHHHHHHhhcCCCEEEE
Q 018075          248 MGSGIDVSFD---CVGFD-------------------------KTMSTALNATRPGGKVCL  280 (361)
Q Consensus       248 ~~~~~d~vld---~~g~~-------------------------~~~~~~~~~l~~~G~~v~  280 (361)
                      ....||.||-   |+|..                         ..+..+++.+++||++|-
T Consensus       182 ~~~~fD~ILvDaPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lk~gG~lVY  242 (313)
T d1ixka_         182 LNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVY  242 (313)
T ss_dssp             GCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             ccccccEEEEccccccCCceeeccchhhhhhhhHHHHHHHHHHHHHHhhhheeCCCcEEEE
Confidence            2467888865   66544                         356778888999998764

>d1yzha1 c.66.1.53 (A:8-211) tRNA (guanine-N(7)-)-methyltransferase TrmB {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=93.22  E-value=0.43  Score=37.28  Aligned_cols=95  Identities=17%  Similarity=0.099  Sum_probs=63.6

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH----HHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          180 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSI----ARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       180 ~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~----~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      ..+|=+|||. |..++.+|+...-..+++++-++.....    +++.+...+.....+..++...   +   ....+|.|
T Consensus        33 plvLdIGcG~-G~~~~~lA~~~p~~~~iGid~~~~~v~~a~~~~~~~~l~Ni~~~~~da~~l~~~---~---~~~~~~~i  105 (204)
T d1yzha1          33 PIHVEVGSGK-GAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDY---F---EDGEIDRL  105 (204)
T ss_dssp             CEEEEESCTT-SHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGT---S---CTTCCSEE
T ss_pred             CeEEEEeccC-CHHHHHHHHHCCCCceEEEeccHHHHHHHHHhhhhhccccceeeecCHHHHhhh---c---cCCceehh
Confidence            3556679887 8999999999855589999998875544    3456665543333322233211   1   24568888


Q ss_pred             EEccCC--------------hHHHHHHHHhhcCCCEEEEE
Q 018075          256 FDCVGF--------------DKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       256 ld~~g~--------------~~~~~~~~~~l~~~G~~v~~  281 (361)
                      +-....              +..++.+.+.|+|||.+.+.
T Consensus       106 ~i~fPdPw~K~~h~krRl~~~~~l~~~~~~LkpgG~l~i~  145 (204)
T d1yzha1         106 YLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFK  145 (204)
T ss_dssp             EEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEE
T ss_pred             cccccccccchhhhhhhhhHHHHHHHHHHhCCCCcEEEEE
Confidence            765543              35788899999999998764

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=93.18  E-value=0.97  Score=37.16  Aligned_cols=113  Identities=16%  Similarity=0.169  Sum_probs=72.7

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEe--CChhHHHHHHHcCCCEEeecCCC---------------
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITD--VDVQRLSIARNLGADETAKVSTD---------------  233 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~--~~~~~~~~~~~lg~~~~~~~~~~---------------  233 (361)
                      ++...++++..|....+|..|++++..|+.+|.+.++.+.  .++.+.+.++.+|+..++.....               
T Consensus        52 ~~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~~~~~~a~~~~~~~~~~  131 (292)
T d2bhsa1          52 EKRGEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANR  131 (292)
T ss_dssp             HHTTSCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHH
T ss_pred             HHhCCcCCCceeeeecccchhHHHHHHHHhcCcceEeeeccCchhhhhHHHHHhCCCcceeecccchHHHHHHHhhcccc
Confidence            3446667777766667899999999999999996555553  35678889999998754421110               


Q ss_pred             ----------ccc-h----hHHHHHHHhhcCCCccEEEEccCChHHHHHH---HHhhcCCCEEEEEcc
Q 018075          234 ----------IED-V----DTDVGKIQNAMGSGIDVSFDCVGFDKTMSTA---LNATRPGGKVCLIGL  283 (361)
Q Consensus       234 ----------~~~-~----~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~---~~~l~~~G~~v~~g~  283 (361)
                                +.+ +    ...-.++.+..+..+|.++-++|+..++.-+   ++.+.+..+++.+..
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~a~Ei~~q~~~~~d~vv~~~G~Gg~~~G~~~~~k~~~~~~~i~~Vep  199 (292)
T d2bhsa1         132 GEGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQP  199 (292)
T ss_dssp             TSSEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEEE
T ss_pred             ccccccCCCchhcchhhHHHHHHHHhHHhcCCCCCcccccCCCccchhhhhhhhhhccCcceEEEecc
Confidence                      000 0    0011233334455699999988877655544   445567788877754

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=93.14  E-value=0.13  Score=40.06  Aligned_cols=109  Identities=17%  Similarity=0.134  Sum_probs=64.3

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc----CCCEEeecCCCccchhHHHHHHHh
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADETAKVSTDIEDVDTDVGKIQN  246 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~~~~~~~~~~~~~~~~~~~~  246 (361)
                      +....+++|+.++=.++|. |-.+-.+++...-..++++|.+++..+.+++.    +.. +..+..   ++...-..+..
T Consensus        16 i~~l~~~~~~~~lD~t~G~-Gghs~~il~~~~~~~vi~~D~d~~~l~~a~~~l~~~~~r-~~~~~~---~f~~~~~~~~~   90 (192)
T d1m6ya2          16 IEFLKPEDEKIILDCTVGE-GGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDR-VSLFKV---SYREADFLLKT   90 (192)
T ss_dssp             HHHHCCCTTCEEEETTCTT-SHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTT-EEEEEC---CGGGHHHHHHH
T ss_pred             HHhhCCCCCCEEEEecCCC-cHHHHHHHhcCCCCeEEEeechHHHHHHHHHhhcccccc-ccchhH---HHhhHHHHHHH
Confidence            3445678888775544454 33444555555334899999999998888763    322 211222   33333222223


Q ss_pred             hcCCCccEEEEccCCh---------------HHHHHHHHhhcCCCEEEEEccC
Q 018075          247 AMGSGIDVSFDCVGFD---------------KTMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       247 ~~~~~~d~vld~~g~~---------------~~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      .+...+|.|+=-.|-.               ..+..+.+.|.++|+++.+...
T Consensus        91 ~~~~~vdgIl~DlGvSs~Qld~~~r~~~~~~~~L~~a~~~Lk~gG~l~ii~f~  143 (192)
T d1m6ya2          91 LGIEKVDGILMDLGVSTYQLKGENRELENLKEFLKKAEDLLNPGGRIVVISFH  143 (192)
T ss_dssp             TTCSCEEEEEEECSCCHHHHHTSHTHHHHHHHHHHHGGGGEEEEEEEEEEESS
T ss_pred             cCCCCcceeeeccchhHhhhhhhhccchhHHHHHHHHHHhcCCCCeeeeeccc
Confidence            3346788875444432               2456677788999998877543

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=92.99  E-value=0.62  Score=35.36  Aligned_cols=131  Identities=13%  Similarity=0.057  Sum_probs=77.1

Q ss_pred             EEEEECCCHHHHH-HHHHHHHcC--CCEEEEEeCChhHHH-HHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075          181 NVMIMGSGPIGLV-TLLAARAFG--APRIIITDVDVQRLS-IARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSF  256 (361)
Q Consensus       181 ~vlI~G~g~~G~~-ai~la~~~g--~~~vv~v~~~~~~~~-~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  256 (361)
                      ++.|+|+|..|.- .+...+..+  ++.+.++++++++.+ ++++++.....      .++.+.+.      ...+|+|+
T Consensus         5 rigiIG~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~------~~~~ell~------~~~id~v~   72 (181)
T d1zh8a1           5 RLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVF------DSYEELLE------SGLVDAVD   72 (181)
T ss_dssp             EEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEE------SCHHHHHH------SSCCSEEE
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhcccccccee------eeeecccc------ccccceee
Confidence            6789999999964 456565543  333334567676654 45667765432      13333321      45799999


Q ss_pred             EccCChHHHHHHHHhhcCCCEEEEEccCCCCcceech---Hhh-hcCcEE-EEeecC----CCcHHHHHHHHHcCCC
Q 018075          257 DCVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALT---PAA-AREVDV-IGIFRY----RSTWPLCIEFLRSGKI  324 (361)
Q Consensus       257 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~---~~~-~~~~~i-~~~~~~----~~~~~~~~~~l~~g~~  324 (361)
                      -++....+.+.+...+..|= =+.+.-+.....-...   .+. .++..+ .+....    ...+..+.+++++|++
T Consensus        73 I~tp~~~h~~~~~~al~~gk-~V~~EKPl~~~~~e~~~l~~~~~~~~~~~~v~~~~R~~~~~~~~~~~~~~i~~G~i  148 (181)
T d1zh8a1          73 LTLPVELNLPFIEKALRKGV-HVICEKPISTDVETGKKVVELSEKSEKTVYIAENFRENSYQKEFEDFYQVVAEGKP  148 (181)
T ss_dssp             ECCCGGGHHHHHHHHHHTTC-EEEEESSSSSSHHHHHHHHHHHHHCSSCEEEECGGGCCHHHHHHHHHHHHHHSCCC
T ss_pred             ccccccccccccccccccch-hhhcCCCCcCCHHHHHHHHHHHHHhCCeEEEEeeccccccCHHHHHHHHHHHCCCC
Confidence            99988878888888888764 4455433222111111   122 223333 333221    2457788899999988

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.98  E-value=0.16  Score=40.27  Aligned_cols=73  Identities=19%  Similarity=0.112  Sum_probs=44.9

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCC-EEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          180 TNVMIMG-SGPIGLVTLLAARAFGAP-RIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       180 ~~vlI~G-~g~~G~~ai~la~~~g~~-~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      .+|||.| +|.+|...+..+...|.+ .++...+++++.+.+.. +...+ ..+  ..+... +.+..    .++|.|+.
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~-~~~~~-~~d--~~~~~~-~~~~~----~~~d~vi~   74 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG-EADVF-IGD--ITDADS-INPAF----QGIDALVI   74 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTC-CTTEE-ECC--TTSHHH-HHHHH----TTCSEEEE
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccC-CcEEE-Eee--eccccc-ccccc----ccceeeEE
Confidence            5899998 699999999998888864 35566777766544321 23322 111  122222 22221    47899999


Q ss_pred             ccCC
Q 018075          258 CVGF  261 (361)
Q Consensus       258 ~~g~  261 (361)
                      +.+.
T Consensus        75 ~a~~   78 (252)
T d2q46a1          75 LTSA   78 (252)
T ss_dssp             CCCC
T ss_pred             EEee
Confidence            8753

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=92.94  E-value=0.043  Score=35.81  Aligned_cols=34  Identities=21%  Similarity=0.439  Sum_probs=29.2

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChh
Q 018075          180 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ  214 (361)
Q Consensus       180 ~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~  214 (361)
                      .+|.|+|+|.+|.+.++-++.+|. .+...+.+++
T Consensus         2 k~vgIlG~GQLgrMl~~Aa~~LG~-~v~vldp~~~   35 (78)
T d3etja2           2 KQVCVLGNGQLGRMLRQAGEPLGI-AVWPVGLDAE   35 (78)
T ss_dssp             EEEEEEBCSHHHHHHHHHHGGGTE-EEEEECTTSC
T ss_pred             CEEEEEcCCHHHHHHHHHHHHcCC-EEEEEcCCCC
Confidence            478999999999999999999999 6777766543

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=92.83  E-value=0.58  Score=35.26  Aligned_cols=96  Identities=17%  Similarity=0.242  Sum_probs=55.6

Q ss_pred             CCCCCCEEEEECC--CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCC-EEeecCCCccchhHHHHHHHhh
Q 018075          175 NVGPETNVMIMGS--GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGAD-ETAKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       175 ~~~~g~~vlI~G~--g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~-~~~~~~~~~~~~~~~~~~~~~~  247 (361)
                      .+.+|.+||=.+|  |.+|.   .. ...|+ .++.++.+++..+.+++    ++.. .+...     +........ ..
T Consensus        38 ~~~~g~~vLDl~~G~G~~~i---~a-~~~ga-~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~-----~~d~~~~~~-~~  106 (171)
T d1ws6a1          38 RYPRRGRFLDPFAGSGAVGL---EA-ASEGW-EAVLVEKDPEAVRLLKENVRRTGLGARVVAL-----PVEVFLPEA-KA  106 (171)
T ss_dssp             HCTTCCEEEEETCSSCHHHH---HH-HHTTC-EEEEECCCHHHHHHHHHHHHHHTCCCEEECS-----CHHHHHHHH-HH
T ss_pred             cccCCCeEEEeccccchhhh---hh-hhccc-hhhhcccCHHHHhhhhHHHHhhccccceeee-----ehhcccccc-cc
Confidence            4688899998864  55554   33 33688 57889999998876644    5543 23221     111111111 12


Q ss_pred             cCCCccEEEEc----cCChHHHHHHHH--hhcCCCEEEEE
Q 018075          248 MGSGIDVSFDC----VGFDKTMSTALN--ATRPGGKVCLI  281 (361)
Q Consensus       248 ~~~~~d~vld~----~g~~~~~~~~~~--~l~~~G~~v~~  281 (361)
                      ....||+||-.    .+-...+..+..  .|+++|.++.-
T Consensus       107 ~~~~fD~If~DPPY~~~~~~~l~~l~~~~ll~~~g~ivie  146 (171)
T d1ws6a1         107 QGERFTVAFMAPPYAMDLAALFGELLASGLVEAGGLYVLQ  146 (171)
T ss_dssp             TTCCEEEEEECCCTTSCTTHHHHHHHHHTCEEEEEEEEEE
T ss_pred             cCCccceeEEccccccCHHHHHHHHHHcCCcCCCeEEEEE
Confidence            34679999752    222334555443  47888877653

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=92.81  E-value=0.13  Score=41.08  Aligned_cols=48  Identities=27%  Similarity=0.327  Sum_probs=40.3

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH-HHcCCC
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA-RNLGAD  225 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~-~~lg~~  225 (361)
                      -.|.+|+|.|.|.+|..+++++...|+ ++++++.+..+.+.+ .+.|..
T Consensus        37 l~g~~v~IqG~GnVG~~~a~~L~~~Ga-kvv~~d~~~~~~~~~~~~~g~~   85 (230)
T d1leha1          37 LEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVAEEGAD   85 (230)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCCE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEeecccHHHHHHHHHhcCCc
Confidence            579999999999999999999999999 788888888776544 445654

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=92.76  E-value=0.067  Score=43.49  Aligned_cols=34  Identities=18%  Similarity=0.322  Sum_probs=29.9

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  212 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~  212 (361)
                      ..++|+|+|+|+.|++++..++..|. .|++.+.+
T Consensus         3 ~~~kV~IiGaG~aGl~~A~~L~~~G~-~v~v~Er~   36 (265)
T d2voua1           3 TTDRIAVVGGSISGLTAALMLRDAGV-DVDVYERS   36 (265)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred             CCCcEEEECcCHHHHHHHHHHHHCCC-CEEEEeCC
Confidence            46899999999999999999999999 68888764

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=92.68  E-value=0.23  Score=41.02  Aligned_cols=33  Identities=21%  Similarity=0.384  Sum_probs=29.3

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEe
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITD  210 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~  210 (361)
                      -+|.+|+|.|.|.+|..+++++...|+ +|++++
T Consensus        34 L~gktvaIqGfGnVG~~~A~~L~e~Ga-kvv~vs   66 (293)
T d1hwxa1          34 FGDKTFAVQGFGNVGLHSMRYLHRFGA-KCVAVG   66 (293)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEE
Confidence            368899999999999999999999999 677664

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=92.64  E-value=1  Score=32.92  Aligned_cols=95  Identities=13%  Similarity=0.097  Sum_probs=59.2

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhH-HHHHHH---cCCCEEeecCCCccchhHHHHHHHhhcCCCccE
Q 018075          179 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQR-LSIARN---LGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV  254 (361)
Q Consensus       179 g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~-~~~~~~---lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  254 (361)
                      -+.++|.|.|.+|..+++.++..|.+ +++++.++++ .+.+++   .|...+ .-+.  .+ .+.+++   .+-..+|.
T Consensus         3 knHiII~G~g~~g~~l~~~L~~~~~~-v~vId~d~~~~~~~~~~~~~~~~~vi-~Gd~--~d-~~~L~~---a~i~~a~~   74 (153)
T d1id1a_           3 KDHFIVCGHSILAINTILQLNQRGQN-VTVISNLPEDDIKQLEQRLGDNADVI-PGDS--ND-SSVLKK---AGIDRCRA   74 (153)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTCC-EEEEECCCHHHHHHHHHHHCTTCEEE-ESCT--TS-HHHHHH---HTTTTCSE
T ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCC-EEEEeccchhHHHHHHHhhcCCcEEE-EccC--cc-hHHHHH---hccccCCE
Confidence            46799999999999999999999994 6777777654 233333   344332 2122  12 223332   24567999


Q ss_pred             EEEccCChHH---HHHHHHhhcCCCEEEEE
Q 018075          255 SFDCVGFDKT---MSTALNATRPGGKVCLI  281 (361)
Q Consensus       255 vld~~g~~~~---~~~~~~~l~~~G~~v~~  281 (361)
                      ++-+.+.+..   .-...+.+.|.-+++.-
T Consensus        75 vi~~~~~d~~n~~~~~~~r~~~~~~~iia~  104 (153)
T d1id1a_          75 ILALSDNDADNAFVVLSAKDMSSDVKTVLA  104 (153)
T ss_dssp             EEECSSCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred             EEEccccHHHHHHHHHHHHHhCCCCceEEE
Confidence            9998886632   22234456677766654

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=92.59  E-value=0.23  Score=39.44  Aligned_cols=92  Identities=15%  Similarity=0.141  Sum_probs=58.9

Q ss_pred             CEEEEECCCHHHH-HHHHHHHHc-CCCEEEEEeCChhHH-HHHHHcCCCE--EeecCCCccchhHHHHHHHhhcCCCccE
Q 018075          180 TNVMIMGSGPIGL-VTLLAARAF-GAPRIIITDVDVQRL-SIARNLGADE--TAKVSTDIEDVDTDVGKIQNAMGSGIDV  254 (361)
Q Consensus       180 ~~vlI~G~g~~G~-~ai~la~~~-g~~~vv~v~~~~~~~-~~~~~lg~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~d~  254 (361)
                      =+|.|+|+|.+|. ..+...+.. +++.+.+++.+.++. ++++++|...  +..+    .++.+.+      ....+|+
T Consensus        34 iriaiIG~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~----~d~~ell------~~~~iD~  103 (221)
T d1h6da1          34 FGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDY----SNFDKIA------KDPKIDA  103 (221)
T ss_dssp             EEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECS----SSGGGGG------GCTTCCE
T ss_pred             EEEEEEcCcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhcccccccccc----Cchhhhc------cccccee
Confidence            3678899999885 344443333 675455667777764 4667777542  2222    1333222      1457999


Q ss_pred             EEEccCChHHHHHHHHhhcCCCEEEEEc
Q 018075          255 SFDCVGFDKTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       255 vld~~g~~~~~~~~~~~l~~~G~~v~~g  282 (361)
                      |+-++....+.+.+..+|..|= =+.+.
T Consensus       104 V~I~tp~~~H~~~~~~al~~gk-~v~~E  130 (221)
T d1h6da1         104 VYIILPNSLHAEFAIRAFKAGK-HVMCE  130 (221)
T ss_dssp             EEECSCGGGHHHHHHHHHHTTC-EEEEC
T ss_pred             eeeccchhhhhhHHHHhhhcch-hhhcC
Confidence            9999998888899999998764 44454

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=92.53  E-value=0.36  Score=37.47  Aligned_cols=72  Identities=19%  Similarity=0.243  Sum_probs=48.1

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCC-EEeecCCCccchhHHHHHHHhhcCCC
Q 018075          173 RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGAD-ETAKVSTDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       173 ~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (361)
                      ..++ .|++||=.|||. |..++. +...|+..|++++.+++..+.+++.-.. ..+.     .++.    ++    +++
T Consensus        44 ~~dl-~Gk~VLDlGcGt-G~l~i~-a~~~ga~~V~~vDid~~a~~~ar~N~~~~~~~~-----~D~~----~l----~~~  107 (197)
T d1ne2a_          44 DGNI-GGRSVIDAGTGN-GILACG-SYLLGAESVTAFDIDPDAIETAKRNCGGVNFMV-----ADVS----EI----SGK  107 (197)
T ss_dssp             HTSS-BTSEEEEETCTT-CHHHHH-HHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEE-----CCGG----GC----CCC
T ss_pred             cCCC-CCCEEEEeCCCC-cHHHHH-HHHcCCCcccccccCHHHHHHHHHccccccEEE-----Eehh----hc----CCc
Confidence            3554 699999999765 555554 4447877899999999999988874432 2222     1221    11    467


Q ss_pred             ccEEEEccC
Q 018075          252 IDVSFDCVG  260 (361)
Q Consensus       252 ~d~vld~~g  260 (361)
                      ||+|+....
T Consensus       108 fD~Vi~NPP  116 (197)
T d1ne2a_         108 YDTWIMNPP  116 (197)
T ss_dssp             EEEEEECCC
T ss_pred             ceEEEeCcc
Confidence            999997543

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=92.49  E-value=0.69  Score=34.95  Aligned_cols=97  Identities=11%  Similarity=0.047  Sum_probs=58.9

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEcc
Q 018075          180 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV  259 (361)
Q Consensus       180 ~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  259 (361)
                      ..|-++|.|.+|...+.-+...|. .|++.++++++.+.+.+.++......-.  ........ .    -...|.++-++
T Consensus         3 ~nIg~IGlG~MG~~mA~~L~~~G~-~V~v~dr~~~~~~~l~~~~~~~~~~~~a--~~~~~~~~-~----~~~~~~ii~~~   74 (176)
T d2pgda2           3 ADIALIGLAVMGQNLILNMNDHGF-VVCAFNRTVSKVDDFLANEAKGTKVLGA--HSLEEMVS-K----LKKPRRIILLV   74 (176)
T ss_dssp             BSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSTHHHHHHHHTTTTTSSCEEC--SSHHHHHH-H----BCSSCEEEECS
T ss_pred             CcEEEEeEhHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHhccccccccch--hhhhhhhh-h----hcccceEEEec
Confidence            467889999999998888888899 5888899999988777665431100000  11111111 1    24567777666


Q ss_pred             CChH----HHHHHHHhhcCCCEEEEEccC
Q 018075          260 GFDK----TMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       260 g~~~----~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      ....    ..+.+...+.++-.++.++..
T Consensus        75 ~~~~~v~~v~~~l~~~~~~g~iiid~sT~  103 (176)
T d2pgda2          75 KAGQAVDNFIEKLVPLLDIGDIIIDGGNS  103 (176)
T ss_dssp             CTTHHHHHHHHHHHHHCCTTCEEEECSCC
T ss_pred             CchHHHHHHHHHHHhccccCcEEEecCcc
Confidence            5443    233455566666666655543

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=92.48  E-value=0.093  Score=40.36  Aligned_cols=37  Identities=27%  Similarity=0.487  Sum_probs=32.0

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  213 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~  213 (361)
                      ...+.+|+|+|+|+.|+.|+..+...|. .|...+..+
T Consensus        40 ~~~~k~V~IIGaGPAGL~AA~~la~~G~-~Vtl~E~~~   76 (179)
T d1ps9a3          40 AVQKKNLAVVGAGPAGLAFAINAAARGH-QVTLFDAHS   76 (179)
T ss_dssp             CSSCCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSS
T ss_pred             CCCCcEEEEECccHHHHHHHHHHHhhcc-ceEEEeccC
Confidence            4567899999999999999999999999 678887654

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=92.46  E-value=0.33  Score=32.83  Aligned_cols=72  Identities=15%  Similarity=0.080  Sum_probs=48.7

Q ss_pred             CCCCCEEEEECCCHHHHHH-HHHHHHcCCCEEEEEeCCh-hHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCcc
Q 018075          176 VGPETNVMIMGSGPIGLVT-LLAARAFGAPRIIITDVDV-QRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~a-i~la~~~g~~~vv~v~~~~-~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      .+...++.++|-|++|+.+ +++++..|. .|.+.|... ...+.+++.|......+..  .    .        -.+.|
T Consensus         5 ~~~~~~ihfiGigG~GMs~LA~~L~~~G~-~VsGSD~~~~~~~~~L~~~Gi~v~~g~~~--~----~--------i~~~d   69 (96)
T d1p3da1           5 MRRVQQIHFIGIGGAGMSGIAEILLNEGY-QISGSDIADGVVTQRLAQAGAKIYIGHAE--E----H--------IEGAS   69 (96)
T ss_dssp             CTTCCEEEEETTTSTTHHHHHHHHHHHTC-EEEEEESCCSHHHHHHHHTTCEEEESCCG--G----G--------GTTCS
T ss_pred             chhCCEEEEEEECHHHHHHHHHHHHhCCC-EEEEEeCCCChhhhHHHHCCCeEEECCcc--c----c--------CCCCC
Confidence            4567899999988788777 789999999 788888753 3455666788764332211  1    1        13578


Q ss_pred             EEEEccCCh
Q 018075          254 VSFDCVGFD  262 (361)
Q Consensus       254 ~vld~~g~~  262 (361)
                      +|+-+.+-+
T Consensus        70 ~vV~S~AI~   78 (96)
T d1p3da1          70 VVVVSSAIK   78 (96)
T ss_dssp             EEEECTTSC
T ss_pred             EEEECCCcC
Confidence            887766544

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=92.46  E-value=0.18  Score=38.54  Aligned_cols=49  Identities=18%  Similarity=0.219  Sum_probs=35.3

Q ss_pred             HHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH
Q 018075          169 HACRR-ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA  219 (361)
Q Consensus       169 ~~l~~-~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~  219 (361)
                      .+++. ..--+|.+|||+|+|+++.+++.-+...|  .+..+.++.++.+.+
T Consensus         7 ~~l~~~~~~~~~k~vlIlGaGG~arai~~aL~~~~--~i~I~nR~~~ka~~l   56 (177)
T d1nvta1           7 MALEEEIGRVKDKNIVIYGAGGAARAVAFELAKDN--NIIIANRTVEKAEAL   56 (177)
T ss_dssp             HHHHHHHCCCCSCEEEEECCSHHHHHHHHHHTSSS--EEEEECSSHHHHHHH
T ss_pred             HHHHHhCCCcCCCEEEEECCcHHHHHHHHHHcccc--ceeeehhhhhHHHHH
Confidence            44543 33358899999999999998887665444  678888888776543

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=92.23  E-value=0.23  Score=35.04  Aligned_cols=42  Identities=14%  Similarity=0.166  Sum_probs=34.4

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  213 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~  213 (361)
                      ++.....++.+++|+|+|.+|.=+++.++..|. .+..+...+
T Consensus        14 ~~~l~~~~~~~vvVvGgG~ig~E~A~~l~~~g~-~vt~i~~~~   55 (121)
T d1mo9a2          14 VEELDYEPGSTVVVVGGSKTAVEYGCFFNATGR-RTVMLVRTE   55 (121)
T ss_dssp             HHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSC
T ss_pred             HHHHhhCCCCEEEEECCCHHHHHHHHHHHhcch-hheEeeccc
Confidence            445667889999999999999999999999999 566666543

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=92.22  E-value=0.55  Score=35.36  Aligned_cols=101  Identities=20%  Similarity=0.254  Sum_probs=63.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEeC--ChhHHHHHHHcCCCE-----EeecCC-------------CccchhHH
Q 018075          181 NVMIMGSGPIGLVTLLAARAFGAPRIIITDV--DVQRLSIARNLGADE-----TAKVST-------------DIEDVDTD  240 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~--~~~~~~~~~~lg~~~-----~~~~~~-------------~~~~~~~~  240 (361)
                      +|.|.|-|-+|.++...+...+.+.+..-+.  +.+...++-++-..+     -+....             +..+..  
T Consensus         2 kIgINGfGRIGR~~~R~~~~~~~~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p~--   79 (169)
T d1dssg1           2 KIGINGFGRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPE--   79 (169)
T ss_dssp             CEEEECCSHHHHHHHHHHHHHTCCEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSGG--
T ss_pred             eEEEECCcHHHHHHHHHHHhCCCcEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCChH--
Confidence            6889999999999999888788854444443  335555554442111     000000             001111  


Q ss_pred             HHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC
Q 018075          241 VGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT  286 (361)
Q Consensus       241 ~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  286 (361)
                        ++.+ ...++|+||||+|.-...+.+..+|..|.+-|.+..+..
T Consensus        80 --~i~W-~~~gvD~ViEcTG~f~~~~~~~~hl~~gakkViisaP~~  122 (169)
T d1dssg1          80 --NIPW-SKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPSA  122 (169)
T ss_dssp             --GCCH-HHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCCS
T ss_pred             --HCCc-cccCCCEEEecCceEcCHHHHHHHHhcCCceEeecCCcc
Confidence              1110 124799999999987778888999999988888875544

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.16  E-value=0.44  Score=36.51  Aligned_cols=90  Identities=22%  Similarity=0.204  Sum_probs=58.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      .|.++.|+|.|.+|...+++++.+|. .|++.++.....+. ...+...        .++.+.+        ...|+|.-
T Consensus        43 ~~k~vgiiG~G~IG~~va~~~~~fg~-~v~~~d~~~~~~~~-~~~~~~~--------~~l~ell--------~~sDiv~~  104 (184)
T d1ygya1          43 FGKTVGVVGLGRIGQLVAQRIAAFGA-YVVAYDPYVSPARA-AQLGIEL--------LSLDDLL--------ARADFISV  104 (184)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCHHHH-HHHTCEE--------CCHHHHH--------HHCSEEEE
T ss_pred             cceeeeeccccchhHHHHHHhhhccc-eEEeecCCCChhHH-hhcCcee--------ccHHHHH--------hhCCEEEE
Confidence            57899999999999999999999999 68888776544433 3334321        1222222        24788877


Q ss_pred             ccCChHH-----HHHHHHhhcCCCEEEEEccCC
Q 018075          258 CVGFDKT-----MSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       258 ~~g~~~~-----~~~~~~~l~~~G~~v~~g~~~  285 (361)
                      +..-...     -...++.|+++..++-++...
T Consensus       105 ~~Plt~~T~~lin~~~l~~mk~~a~lIN~sRG~  137 (184)
T d1ygya1         105 HLPKTPETAGLIDKEALAKTKPGVIIVNAARGG  137 (184)
T ss_dssp             CCCCSTTTTTCBCHHHHTTSCTTEEEEECSCTT
T ss_pred             cCCCCchhhhhhhHHHHhhhCCCceEEEecchh
Confidence            6543211     235667788888776655443

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=92.07  E-value=0.16  Score=40.21  Aligned_cols=100  Identities=15%  Similarity=0.166  Sum_probs=61.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEEeCChhHHHHHH----HcCCCEEeecCCCccchhHHHHHHHhh-cC
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAF--GAPRIIITDVDVQRLSIAR----NLGADETAKVSTDIEDVDTDVGKIQNA-MG  249 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~--g~~~vv~v~~~~~~~~~~~----~lg~~~~~~~~~~~~~~~~~~~~~~~~-~~  249 (361)
                      .+..+||-+|++. |..++.+|+.+  +. ++++++.+++..+.++    +.|...-+...  .++..+.+.++... ..
T Consensus        55 ~kpk~ILEiGt~~-G~Sti~la~al~~~g-~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~--~Gd~~e~l~~l~~~~~~  130 (214)
T d2cl5a1          55 YSPSLVLELGAYC-GYSAVRMARLLQPGA-RLLTMEMNPDYAAITQQMLNFAGLQDKVTIL--NGASQDLIPQLKKKYDV  130 (214)
T ss_dssp             HCCSEEEEECCTT-SHHHHHHHTTCCTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEE--ESCHHHHGGGHHHHSCC
T ss_pred             hCCCEEEEEccCc-hhHHHHHHHhCCCcc-EEEEEeccHHHHHHHHHHHHHcCCCccceee--eccccccccchhhcccc
Confidence            4457999999755 66777888876  34 7999999998776664    45643312211  13444444444432 23


Q ss_pred             CCccEEEEccCChH-----HHHHHHHhhcCCCEEEE
Q 018075          250 SGIDVSFDCVGFDK-----TMSTALNATRPGGKVCL  280 (361)
Q Consensus       250 ~~~d~vld~~g~~~-----~~~~~~~~l~~~G~~v~  280 (361)
                      ..+|++|--.....     .+...++.|+|||.++.
T Consensus       131 ~~~D~ifiD~~~~~~~~~~~l~~~~~lLkpGGvIv~  166 (214)
T d2cl5a1         131 DTLDMVFLDHWKDRYLPDTLLLEKCGLLRKGTVLLA  166 (214)
T ss_dssp             CCEEEEEECSCGGGHHHHHHHHHHTTCEEEEEEEEE
T ss_pred             cccceeeecccccccccHHHHHHHhCccCCCcEEEE
Confidence            56998876433221     23445567999997654

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=92.06  E-value=0.33  Score=39.39  Aligned_cols=79  Identities=13%  Similarity=0.061  Sum_probs=45.4

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHH--HHHHHc----CCCEEeec--CCCccchhHHHHH----HHhh
Q 018075          181 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRL--SIARNL----GADETAKV--STDIEDVDTDVGK----IQNA  247 (361)
Q Consensus       181 ~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~--~~~~~l----g~~~~~~~--~~~~~~~~~~~~~----~~~~  247 (361)
                      ..||.| ++++|.+.++.+...|+ .|+.++++.++.  ++++++    +.......  .....+..+.+.+    ..+.
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            457788 58999999999999999 677777665432  233332    33322111  1111122222222    2222


Q ss_pred             cCCCccEEEEccCC
Q 018075          248 MGSGIDVSFDCVGF  261 (361)
Q Consensus       248 ~~~~~d~vld~~g~  261 (361)
                       -+++|+++++.|.
T Consensus        82 -~g~iDilvnnAG~   94 (266)
T d1mxha_          82 -FGRCDVLVNNASA   94 (266)
T ss_dssp             -HSCCCEEEECCCC
T ss_pred             -hCCCCEEEECCcc
Confidence             2479999999873

>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Histamine methyltransferase
domain: Histamine methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.03  E-value=0.15  Score=42.10  Aligned_cols=107  Identities=12%  Similarity=0.122  Sum_probs=60.7

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHc-----CCC-EEEEEeCChhHHHHHHHcCC-----CE-EeecCCCccchhHHHH
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARAF-----GAP-RIIITDVDVQRLSIARNLGA-----DE-TAKVSTDIEDVDTDVG  242 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~~-----g~~-~vv~v~~~~~~~~~~~~lg~-----~~-~~~~~~~~~~~~~~~~  242 (361)
                      ..++.-+||=+|||. |..+..+++..     +.. .+++++.++...+.+++.-.     .. ..++..  ..+.....
T Consensus        37 ~~~~~~~VLDiGcG~-G~~~~~ll~~l~~~~~~~~~~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~--~~~~~~~~  113 (280)
T d1jqea_          37 DTKSEIKILSIGGGA-GEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKISNLENVKFAWHK--ETSSEYQS  113 (280)
T ss_dssp             TTCSEEEEEEETCTT-SHHHHHHHHHHHHHSTTCEEEEEEECCCHHHHHHHHHHHTTCCSCTTEEEEEEC--SCHHHHHH
T ss_pred             cCCCCCeEEEEcCCC-CHHHHHHHHHhhhhccCCceEEEEEeCcHHHHHHHHHHHhhccccccccccchh--hhhhhhcc
Confidence            345555899999865 55555554432     221 47889999988777765311     11 111111  11111111


Q ss_pred             HH-HhhcCCCccEEEEcc-----CC-hHHHHHHHHhhcCCCEEEEEccC
Q 018075          243 KI-QNAMGSGIDVSFDCV-----GF-DKTMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       243 ~~-~~~~~~~~d~vld~~-----g~-~~~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      .. .......||+|+..-     .. ...++.+.+.|+|||.++.....
T Consensus       114 ~~~~~~~~~~fD~I~~~~~l~~~~d~~~~l~~l~~~LkpgG~l~i~~~~  162 (280)
T d1jqea_         114 RMLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVS  162 (280)
T ss_dssp             HHTTSSSCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred             hhcccCCCCceeEEEEccceecCCCHHHHHHHHHhhCCCCCEEEEEEec
Confidence            11 111356899998732     22 25788999999999998876543

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.02  E-value=1  Score=32.74  Aligned_cols=75  Identities=21%  Similarity=0.216  Sum_probs=46.5

Q ss_pred             CEEEEECC-CHHHHHHHHHHHHcCC-CEEEEEeCChhHHHHHHHcCCCEEeecC--CCccchhHHHHHHHhhcCCCccEE
Q 018075          180 TNVMIMGS-GPIGLVTLLAARAFGA-PRIIITDVDVQRLSIARNLGADETAKVS--TDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       180 ~~vlI~G~-g~~G~~ai~la~~~g~-~~vv~v~~~~~~~~~~~~lg~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      .+|.|+|+ |.+|...+.++...+. +.++.++.++.+-+.++-.-+.......  ....+..+.   +     .+.|+|
T Consensus         1 sKv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~~~~~~~~---~-----~~aDiv   72 (144)
T d1mlda1           1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDC---L-----KGCDVV   72 (144)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHH---H-----TTCSEE
T ss_pred             CeEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEEcCCChHHH---h-----CCCCEE
Confidence            37899995 9999999999988875 6788888877655443322221111000  011122111   1     579999


Q ss_pred             EEccCCh
Q 018075          256 FDCVGFD  262 (361)
Q Consensus       256 ld~~g~~  262 (361)
                      +-+.|.+
T Consensus        73 Vitag~~   79 (144)
T d1mlda1          73 VIPAGVP   79 (144)
T ss_dssp             EECCSCC
T ss_pred             EECCCcC
Confidence            9998854

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=91.95  E-value=0.41  Score=33.91  Aligned_cols=40  Identities=25%  Similarity=0.344  Sum_probs=32.2

Q ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075          173 RANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  213 (361)
Q Consensus       173 ~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~  213 (361)
                      ...-.++.+|+|+|+|.+|.-+++.++.+|. .|..+...+
T Consensus        24 ~~~~~~~k~vvViGgG~iG~E~A~~l~~~g~-~Vtlie~~~   63 (123)
T d1nhpa2          24 KTVDPEVNNVVVIGSGYIGIEAAEAFAKAGK-KVTVIDILD   63 (123)
T ss_dssp             HHTCTTCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred             HhhccCCCEEEEECChHHHHHHHHHhhccce-EEEEEEecC
Confidence            3444567899999999999999999999999 566675543

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=91.94  E-value=0.085  Score=43.66  Aligned_cols=33  Identities=18%  Similarity=0.448  Sum_probs=29.2

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075          179 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  212 (361)
Q Consensus       179 g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~  212 (361)
                      +++|+|+|+|+.|++++..++..|. .|..++.+
T Consensus         1 ~KkV~IIGaG~aGL~aA~~La~~G~-~V~vlE~~   33 (373)
T d1seza1           1 AKRVAVIGAGVSGLAAAYKLKIHGL-NVTVFEAE   33 (373)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTSC-EEEEECSS
T ss_pred             CCEEEEECcCHHHHHHHHHHHhCCC-CEEEEeCC
Confidence            5789999999999999999999999 68888754

>d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Phenylethanolamine N-methyltransferase, PNMTase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.90  E-value=0.19  Score=41.05  Aligned_cols=46  Identities=22%  Similarity=0.187  Sum_probs=33.6

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN  221 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~  221 (361)
                      .+..+|.++|-+|||+ |...+..+...+. .|+++|.++...+.+++
T Consensus        50 ~g~~~g~~vLDiGcG~-g~~~~~~~~~~~~-~v~~~D~S~~~i~~~~~   95 (263)
T d2g72a1          50 TGEVSGRTLIDIGSGP-TVYQLLSACSHFE-DITMTDFLEVNRQELGR   95 (263)
T ss_dssp             TSCSCCSEEEEETCTT-CCGGGTTGGGGCS-EEEEECSCHHHHHHHHH
T ss_pred             CCCCCCcEEEEeccCC-CHHHHHHhcccCC-eEEEEeCCHHHHHHHHH
Confidence            3456789999999976 5444334444444 79999999999888875

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=91.90  E-value=1.6  Score=32.02  Aligned_cols=97  Identities=16%  Similarity=0.158  Sum_probs=62.4

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHcC--CCEEEEEeCChh---HHHHHHHcCCCEEeecCCCccchhHHHHHH----------
Q 018075          181 NVMIMG-SGPIGLVTLLAARAFG--APRIIITDVDVQ---RLSIARNLGADETAKVSTDIEDVDTDVGKI----------  244 (361)
Q Consensus       181 ~vlI~G-~g~~G~~ai~la~~~g--~~~vv~v~~~~~---~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~----------  244 (361)
                      ++.|+| +|++|.-+..+.+...  + .|++.+....   -.+.+.+|....+...++  ....+....+          
T Consensus         3 ~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~--~~~~~l~~~l~~~~~~~~~~   79 (151)
T d1q0qa2           3 QLTILGSTGSIGCSTLDVVRHNPEHF-RVVALVAGKNVTRMVEQCLEFSPRYAVMDDE--ASAKLLKTMLQQQGSRTEVL   79 (151)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTTE-EEEEEEESSCHHHHHHHHHHHCCSEEEESSH--HHHHHHHHHHHHTTCCCEEE
T ss_pred             eEEEEcCCcHHHHHHHHHHHhCCCCc-EEEEEEecCcHHHHHHHHHHHhhcccccccH--HHHHHHHHHhhhhccccccc
Confidence            688999 5999999999999873  5 4666655443   235667788888765432  1111111111          


Q ss_pred             ------Hh-hcCCCccEEEEccCChHHHHHHHHhhcCCCEEEE
Q 018075          245 ------QN-AMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCL  280 (361)
Q Consensus       245 ------~~-~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~  280 (361)
                            .+ ....++|+|+.+..+-..+...+..+..|=++.+
T Consensus        80 ~g~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~gk~iaL  122 (151)
T d1q0qa2          80 SGQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILL  122 (151)
T ss_dssp             ESHHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTTCEEEE
T ss_pred             cChHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcCCeEEE
Confidence                  00 1134689999888777778888888887766544

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.90  E-value=0.19  Score=39.00  Aligned_cols=39  Identities=23%  Similarity=0.367  Sum_probs=33.7

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH
Q 018075          180 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA  219 (361)
Q Consensus       180 ~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~  219 (361)
                      ++|.|+|+|.+|...++++...|. .|+..+.+++..+.+
T Consensus         5 kkvaViGaG~mG~~iA~~~a~~G~-~V~l~D~~~~~l~~a   43 (192)
T d1f0ya2           5 KHVTVIGGGLMGAGIAQVAAATGH-TVVLVDQTEDILAKS   43 (192)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHH
T ss_pred             EEEEEECcCHHHHHHHHHHHhCCC-cEEEEECChHHHHHH
Confidence            589999999999999999999999 789999998765544

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=91.86  E-value=0.34  Score=37.42  Aligned_cols=91  Identities=16%  Similarity=0.066  Sum_probs=57.4

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      .|.++.|+|.|.+|...+++++.+|. .++..+............+....       .++.+.+        ...|+|.-
T Consensus        46 ~g~tvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~~~~~~~-------~~l~~ll--------~~sD~v~l  109 (191)
T d1gdha1          46 DNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRASSSDEASYQATFH-------DSLDSLL--------SVSQFFSL  109 (191)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCCHHHHHHHTCEEC-------SSHHHHH--------HHCSEEEE
T ss_pred             cccceEEeecccchHHHHHHHHhhcc-ccccccccccccchhhccccccc-------CCHHHHH--------hhCCeEEe
Confidence            37999999999999999999999999 67777765543333333332210       1233322        24678876


Q ss_pred             ccCCh-H----HHHHHHHhhcCCCEEEEEccC
Q 018075          258 CVGFD-K----TMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       258 ~~g~~-~----~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      +..-. +    .-...++.|+++..+|-++..
T Consensus       110 ~~plt~~T~~li~~~~l~~mk~~a~lIN~sRG  141 (191)
T d1gdha1         110 NAPSTPETRYFFNKATIKSLPQGAIVVNTARG  141 (191)
T ss_dssp             CCCCCTTTTTCBSHHHHTTSCTTEEEEECSCG
T ss_pred             cCCCCchHhheecHHHhhCcCCccEEEecCCc
Confidence            55322 1    123567788888877665433

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

Probab=91.72  E-value=0.76  Score=38.28  Aligned_cols=113  Identities=15%  Similarity=0.159  Sum_probs=72.0

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEe--CChhHHHHHHHcCCCEEeecCCC---------------
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITD--VDVQRLSIARNLGADETAKVSTD---------------  233 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~--~~~~~~~~~~~lg~~~~~~~~~~---------------  233 (361)
                      .+...+.+++.|+...+|..|++++..|+..|.+.++.+.  .+..+...++.+|+..+......               
T Consensus        53 ~~~g~~~~~~~vv~~SsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~vv~~~~~~~~~~~~~~~~~~~~~  132 (310)
T d1y7la1          53 EKDGTLTKGKEIVDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAKGMKGAIAKAEEIVAS  132 (310)
T ss_dssp             HHTTSSCTTCEEEESCCSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHH
T ss_pred             HHcCCCCCCceeeeecCCCchHHHHHHHHHhhccccccchhhhhhhhhhhHHHhCCceEeccCccccchhhHHHHHHHHh
Confidence            3445667887776667899999999999999997666664  34567788888998765421100               


Q ss_pred             ----------ccch-------hHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhc----CCCEEEEEcc
Q 018075          234 ----------IEDV-------DTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATR----PGGKVCLIGL  283 (361)
Q Consensus       234 ----------~~~~-------~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~----~~G~~v~~g~  283 (361)
                                ..+.       .....++....+..+|.++.++|+..++.-+...++    +.=+++.+..
T Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~a~Ei~~~~~~~~d~vv~~~G~Gg~~~G~~~~lk~~~~~~~~~i~ve~  203 (310)
T d1y7la1         133 DPSRYVMLKQFENPANPQIHRETTGPEIWKDTDGKVDVVVAGVGTGGSITGISRAIKLDFGKQITSVAVEP  203 (310)
T ss_dssp             CTTTEECCCTTTCTHHHHHHHHTHHHHHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHTSCCCCEEEEEEE
T ss_pred             hcCccccCCCCcchhhHHHhhhhHHHHHHHhcCCCCCEEEecCcCCcchhHHHHHHHHhhcccceeccccc
Confidence                      0000       011123333445579999999988877666666553    4445555543

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=91.55  E-value=0.21  Score=43.21  Aligned_cols=32  Identities=28%  Similarity=0.379  Sum_probs=27.2

Q ss_pred             CCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeC
Q 018075          179 ETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDV  211 (361)
Q Consensus       179 g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~  211 (361)
                      |.+|||.| +|-+|..++..+...|. .|+++|.
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~-~V~~iDn   33 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNY-EVCIVDN   33 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEec
Confidence            68999998 69999999998888998 6888863

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=91.45  E-value=0.26  Score=40.47  Aligned_cols=36  Identities=11%  Similarity=0.098  Sum_probs=25.3

Q ss_pred             EEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHH
Q 018075          182 VMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLS  217 (361)
Q Consensus       182 vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~  217 (361)
                      +||.| ++++|.+.++.+...|+++++...+++++.+
T Consensus         5 AlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~   41 (284)
T d1e7wa_           5 ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEAN   41 (284)
T ss_dssp             EEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHH
T ss_pred             EEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHH
Confidence            46668 5899999999998999954444445555443

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=91.44  E-value=0.21  Score=40.34  Aligned_cols=33  Identities=27%  Similarity=0.334  Sum_probs=29.7

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEe
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITD  210 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~  210 (361)
                      -.|.+|+|.|.|.+|..+++++...|+ +|++++
T Consensus        29 l~g~~v~IqGfGnVG~~~a~~L~~~Ga-kvv~vs   61 (242)
T d1v9la1          29 IEGKTVAIQGMGNVGRWTAYWLEKMGA-KVIAVS   61 (242)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEEE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEee
Confidence            589999999999999999999999999 677664

>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Salmonella typhimurium [TaxId: 90371]

Probab=91.41  E-value=2.1  Score=35.14  Aligned_cols=104  Identities=18%  Similarity=0.225  Sum_probs=66.5

Q ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEe--CChhHHHHHHHcCCCEEeecC---------------
Q 018075          169 HACRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITD--VDVQRLSIARNLGADETAKVS---------------  231 (361)
Q Consensus       169 ~~l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~--~~~~~~~~~~~lg~~~~~~~~---------------  231 (361)
                      ++++...++++..+...++|..|.+++..++.+|.+.++.+.  .++.+...++.+|+..+....               
T Consensus        51 ~a~~~g~~~~~~~vv~assGn~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~~~ga~v~~~~~~~~~~~~~~~~~~~~  130 (302)
T d1fcja_          51 DAEKRGVLKPGVELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIV  130 (302)
T ss_dssp             HHHHHTCCCTTCEEEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHH
T ss_pred             HHHHcCCCCCCceEEEeccccchhHHHHHHHHhccCCceEEeecCcHHHHHHHHHhccceEEeccccccchhhhHHHHHH
Confidence            344556778888777677899999999999999987655553  455677788888876543110               


Q ss_pred             ----------CCccch-------hHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhh
Q 018075          232 ----------TDIEDV-------DTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNAT  272 (361)
Q Consensus       232 ----------~~~~~~-------~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l  272 (361)
                                ....+.       ...-.++.+..+..+|.++-++|+..++.-.+..+
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~ti~~Ei~e~~~~~~d~vv~~vG~GG~~~Gi~~~l  188 (302)
T d1fcja_         131 ASDPQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYI  188 (302)
T ss_dssp             HTSTTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHH
T ss_pred             hhhccceeccccccccchhHHHHhHHHHHHHHhcCCCCCEEEEcCCCccccccceeee
Confidence                      000000       11112344444557899999999876665555544

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=91.37  E-value=0.46  Score=40.06  Aligned_cols=73  Identities=25%  Similarity=0.303  Sum_probs=43.0

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeC----ChhHHHHHHHc---CCCEEeecCCCccchhHHHHHHHhhcCCCc
Q 018075          181 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDV----DVQRLSIARNL---GADETAKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       181 ~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~----~~~~~~~~~~l---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      +|||.| +|-+|...+..+...|. .|+++++    ........+.+   +...+ .  .+-.+.....+.+.   ..++
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~--~Dl~d~~~l~~~~~---~~~~   74 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGH-DVIILDNLCNSKRSVLPVIERLGGKHPTFV-E--GDIRNEALMTEILH---DHAI   74 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCTTHHHHHHHHHTSCCEEE-E--CCTTCHHHHHHHHH---HTTC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcchhhHHHHHhhcCCCCEEE-E--eecCCHHHHHHHHh---ccCC
Confidence            699998 69999999999888998 5777753    22333333332   23222 1  12223222222222   2479


Q ss_pred             cEEEEccC
Q 018075          253 DVSFDCVG  260 (361)
Q Consensus       253 d~vld~~g  260 (361)
                      |+||.+++
T Consensus        75 d~ViHlAa   82 (338)
T d1udca_          75 DTVIHFAG   82 (338)
T ss_dssp             SEEEECCS
T ss_pred             CEEEECCC
Confidence            99999764

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.35  E-value=0.51  Score=34.63  Aligned_cols=42  Identities=14%  Similarity=0.376  Sum_probs=31.7

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEe--CChhHHHHHH
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITD--VDVQRLSIAR  220 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~--~~~~~~~~~~  220 (361)
                      .|.+|||+|+|.+|..-+..+...|++ |.+++  .+++-..+++
T Consensus        12 ~gkrvLViGgG~va~~ka~~Ll~~GA~-VtVvap~~~~~l~~~~~   55 (150)
T d1kyqa1          12 KDKRILLIGGGEVGLTRLYKLMPTGCK-LTLVSPDLHKSIIPKFG   55 (150)
T ss_dssp             TTCEEEEEEESHHHHHHHHHHGGGTCE-EEEEEEEECTTHHHHHC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEeCCCCHHHHHHHH
Confidence            689999999999999999999999994 55553  2444444443

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=91.31  E-value=0.22  Score=42.31  Aligned_cols=45  Identities=13%  Similarity=0.162  Sum_probs=35.7

Q ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH
Q 018075          176 VGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN  221 (361)
Q Consensus       176 ~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~  221 (361)
                      +.+|.+|||.| +|-+|...++.+...|. .|+++.++.++.+.+++
T Consensus         8 ~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~-~V~~~vR~~~~~~~~~~   53 (342)
T d1y1pa1           8 LPEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQK   53 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH
T ss_pred             CCCcCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCchhHHHHHH
Confidence            57899999998 58899999988877898 57777777766555443

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=91.29  E-value=0.28  Score=37.86  Aligned_cols=90  Identities=17%  Similarity=0.131  Sum_probs=58.4

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      .+.++.|+|.|.+|...+++++.+|. .|+..+.........+..+....       .+..+    +    -...|+|.-
T Consensus        43 ~~~~vgiiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~~~~~~~~~~~-------~~l~~----~----l~~sD~v~~  106 (188)
T d2naca1          43 EAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKELNLTWH-------ATRED----M----YPVCDVVTL  106 (188)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHHTCEEC-------SSHHH----H----GGGCSEEEE
T ss_pred             cccceeeccccccchhhhhhhhccCc-eEEEEeecccccccccccccccc-------CCHHH----H----HHhccchhh
Confidence            57899999999999999999999999 68888876554555455554321       11111    1    135778766


Q ss_pred             ccCChH-----HHHHHHHhhcCCCEEEEEcc
Q 018075          258 CVGFDK-----TMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       258 ~~g~~~-----~~~~~~~~l~~~G~~v~~g~  283 (361)
                      +..-..     .-.+.++.|+++..+|-++.
T Consensus       107 ~~plt~~T~~li~~~~l~~mk~ga~lIN~aR  137 (188)
T d2naca1         107 NCPLHPETEHMINDETLKLFKRGAYIVNTAR  137 (188)
T ss_dssp             CSCCCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             cccccccchhhhHHHHHHhCCCCCEEEecCc
Confidence            554221     12446677777776665543

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=91.19  E-value=0.28  Score=38.26  Aligned_cols=46  Identities=22%  Similarity=0.302  Sum_probs=33.5

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN  221 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~  221 (361)
                      .+-.+|++||=.|||. |..++.++ ..|+..|++++.+++..+.+++
T Consensus        42 ~~dl~g~~vLDlg~Gt-G~l~i~a~-~~g~~~v~~vdi~~~~~~~a~~   87 (201)
T d1wy7a1          42 LGDIEGKVVADLGAGT-GVLSYGAL-LLGAKEVICVEVDKEAVDVLIE   87 (201)
T ss_dssp             TTSSTTCEEEEETCTT-CHHHHHHH-HTTCSEEEEEESCHHHHHHHHH
T ss_pred             cCCCCCCEEEECcCcc-hHHHHHHH-HcCCCEEEEEcCcHHHHHHHHH
Confidence            3445789999998654 44445544 4787789999999998887765

>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Aclacinomycin-10-hydroxylase RdmB
species: Streptomyces purpurascens [TaxId: 1924]

Probab=91.14  E-value=0.35  Score=39.26  Aligned_cols=102  Identities=15%  Similarity=0.168  Sum_probs=63.2

Q ss_pred             HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHH----HHHcCCCEEeecCCCccchhHHHHHHHh
Q 018075          171 CRRANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSI----ARNLGADETAKVSTDIEDVDTDVGKIQN  246 (361)
Q Consensus       171 l~~~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~----~~~lg~~~~~~~~~~~~~~~~~~~~~~~  246 (361)
                      ++...+....+||=+|+|. |..++.+++...--.+++++. ++-.+.    +++.+....+....  .++.+       
T Consensus        74 ~~~~d~~~~~~vlDvG~G~-G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~~~~~~~~ri~~~~--~d~~~-------  142 (256)
T d1qzza2          74 ADAYDWSAVRHVLDVGGGN-GGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAE--GDFFK-------  142 (256)
T ss_dssp             HHTSCCTTCCEEEEETCTT-SHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEE--CCTTS-------
T ss_pred             HhcCCCccCCEEEEECCCC-CHHHHHHHHhhcCcEEEEecC-hHHHHHHHHHHhhcCCcceeeeee--eeccc-------
Confidence            3445677788999999877 889999999874337888886 433333    33344322111111  11111       


Q ss_pred             hcCCCccEEEEcc-----CCh---HHHHHHHHhhcCCCEEEEEcc
Q 018075          247 AMGSGIDVSFDCV-----GFD---KTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       247 ~~~~~~d~vld~~-----g~~---~~~~~~~~~l~~~G~~v~~g~  283 (361)
                      ..+.++|+++-..     +.+   ..++.+.+.|+|||+++++..
T Consensus       143 ~~p~~~D~v~~~~vLh~~~d~~~~~lL~~i~~~LkpgG~llI~d~  187 (256)
T d1qzza2         143 PLPVTADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR  187 (256)
T ss_dssp             CCSCCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred             cccccchhhhccccccccCcHHHHHHHHHHHhhcCCcceeEEEEe
Confidence            1145789887532     211   357888899999999998864

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=91.12  E-value=0.48  Score=37.82  Aligned_cols=33  Identities=18%  Similarity=0.443  Sum_probs=27.4

Q ss_pred             CCCCEEEEECCCHHHHHHHHHH-HHcCCCEEEEEe
Q 018075          177 GPETNVMIMGSGPIGLVTLLAA-RAFGAPRIIITD  210 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la-~~~g~~~vv~v~  210 (361)
                      -+|.+|+|.|.|.+|..+++++ +..|+ ++++++
T Consensus        29 l~g~~vaIqG~GnVG~~~a~~L~~e~Ga-~vv~vs   62 (234)
T d1b26a1          29 PKKATVAVQGFGNVGQFAALLISQELGS-KVVAVS   62 (234)
T ss_dssp             TTTCEEEEECCSHHHHHHHHHHHHHHCC-EEEEEE
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHhcCC-ceEEee
Confidence            4789999999999999999877 56799 566664

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=91.10  E-value=1.9  Score=31.21  Aligned_cols=38  Identities=26%  Similarity=0.543  Sum_probs=30.7

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCC-CEEEEEeCChhHHH
Q 018075          180 TNVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQRLS  217 (361)
Q Consensus       180 ~~vlI~G~g~~G~~ai~la~~~g~-~~vv~v~~~~~~~~  217 (361)
                      .+|.|+|+|.+|..++..+...+. +.++.++.++++.+
T Consensus         2 ~Ki~IIGaG~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~   40 (143)
T d1llda1           2 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVE   40 (143)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHH
T ss_pred             CEEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccccch
Confidence            478899999999999888877774 56888998887653

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=90.95  E-value=2  Score=31.12  Aligned_cols=98  Identities=17%  Similarity=0.141  Sum_probs=59.6

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEc
Q 018075          180 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  258 (361)
Q Consensus       180 ~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  258 (361)
                      .+|.|+| .|.+|...+..++..|.+ |.+.+.+.+........+++.++.. .........+.++..... +=.+++|+
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~G~~-V~~~d~~~~~~~~~~~~~~~~v~~~-~~~~~~~~v~~~~~~~~~-~~~iiiD~   86 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRASGYP-ISILDREDWAVAESILANADVVIVS-VPINLTLETIERLKPYLT-ENMLLADL   86 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCC-EEEECTTCGGGHHHHHTTCSEEEEC-SCGGGHHHHHHHHGGGCC-TTSEEEEC
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHcCCC-cEecccccccccchhhhhccccccc-cchhhheeeeeccccccc-CCceEEEe
Confidence            6899999 799999999999999994 7888887766555555566665543 222344444444433222 22477887


Q ss_pred             cCChHHHHHHHHhhcCCCEEEEE
Q 018075          259 VGFDKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       259 ~g~~~~~~~~~~~l~~~G~~v~~  281 (361)
                      ..........+....+ ++++..
T Consensus        87 ~Svk~~~~~~~~~~~~-~~~v~~  108 (152)
T d2pv7a2          87 TSVKREPLAKMLEVHT-GAVLGL  108 (152)
T ss_dssp             CSCCHHHHHHHHHHCS-SEEEEE
T ss_pred             cccCHHHHHHHHHHcc-CCEEEe
Confidence            6655333333333222 356544

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.94  E-value=0.13  Score=41.95  Aligned_cols=33  Identities=24%  Similarity=0.424  Sum_probs=28.3

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075          181 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  213 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~  213 (361)
                      +|+|+|+|+.|++++.+++..|.+.|.+.+.++
T Consensus         3 ~V~IvGaG~aGl~~A~~L~~~Gi~~V~V~Er~~   35 (288)
T d3c96a1           3 DILIAGAGIGGLSCALALHQAGIGKVTLLESSS   35 (288)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence            689999999999999999999976677776654

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.70  E-value=0.14  Score=41.04  Aligned_cols=37  Identities=24%  Similarity=0.346  Sum_probs=29.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCC-CEEEEEeCChh
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGA-PRIIITDVDVQ  214 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~-~~vv~v~~~~~  214 (361)
                      .+.+|||.| +|-+|...++.+...|. ..|+++++++.
T Consensus        13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~   51 (232)
T d2bkaa1          13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKL   51 (232)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChh
Confidence            347899998 59999999998877774 46888877654

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=90.63  E-value=0.12  Score=40.18  Aligned_cols=87  Identities=9%  Similarity=0.201  Sum_probs=55.0

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCE----EeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          180 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADE----TAKVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       180 ~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      .+|.|+|+|..|.+.+.++...|- .|....++++..+.+.+-+...    .+....+ -.+...+.+.    -.+.|++
T Consensus         8 ~KI~ViGaG~wGtAlA~~La~~g~-~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~-i~~t~~l~~a----~~~ad~i   81 (189)
T d1n1ea2           8 NKAVVFGSGAFGTALAMVLSKKCR-EVCVWHMNEEEVRLVNEKRENVLFLKGVQLASN-ITFTSDVEKA----YNGAEII   81 (189)
T ss_dssp             EEEEEECCSHHHHHHHHHHHTTEE-EEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTT-EEEESCHHHH----HTTCSCE
T ss_pred             ceEEEECCCHHHHHHHHHHHHcCC-eEEEEEecHHHHHHHhhcccccccccccccccc-cccchhhhhc----cCCCCEE
Confidence            379999999999999988887776 5777788888877766543211    0111111 0111112221    1468999


Q ss_pred             EEccCChHHHHHHHHhhc
Q 018075          256 FDCVGFDKTMSTALNATR  273 (361)
Q Consensus       256 ld~~g~~~~~~~~~~~l~  273 (361)
                      +-++... .+...++.+.
T Consensus        82 iiavPs~-~~~~~~~~~~   98 (189)
T d1n1ea2          82 LFVIPTQ-FLRGFFEKSG   98 (189)
T ss_dssp             EECSCHH-HHHHHHHHHC
T ss_pred             EEcCcHH-HHHHHHHHHH
Confidence            9999966 6677766554

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=90.62  E-value=0.17  Score=40.44  Aligned_cols=36  Identities=25%  Similarity=0.363  Sum_probs=31.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  213 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~  213 (361)
                      +.+++|+|+|+|+.|+.++..++..|. .|..++.++
T Consensus        47 ~~~k~VvIIGaGpAGl~aA~~l~~~G~-~v~l~E~~~   82 (233)
T d1djqa3          47 KNKDSVLIVGAGPSGSEAARVLMESGY-TVHLTDTAE   82 (233)
T ss_dssp             SSCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             cCCceEEEEcccHHHHHHHHHHHHhcc-ceeeEeecc
Confidence            567999999999999999999999999 577776554

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=90.62  E-value=1.2  Score=29.39  Aligned_cols=68  Identities=18%  Similarity=0.254  Sum_probs=46.3

Q ss_pred             CEEEEECCCHHHHHH-HHHHHHcCCCEEEEEeCCh-hHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          180 TNVMIMGSGPIGLVT-LLAARAFGAPRIIITDVDV-QRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       180 ~~vlI~G~g~~G~~a-i~la~~~g~~~vv~v~~~~-~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      -+|-++|-|++|+.+ +++++..|. .|.+.|..+ +..+.++++|+......+.  ..            -.++|+|+-
T Consensus         2 ~~ihfiGIgG~GMs~LA~~L~~~G~-~VsGSD~~~~~~t~~L~~~Gi~i~~gh~~--~~------------i~~~d~vV~   66 (89)
T d1j6ua1           2 MKIHFVGIGGIGMSAVALHEFSNGN-DVYGSNIEETERTAYLRKLGIPIFVPHSA--DN------------WYDPDLVIK   66 (89)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHTTCCEESSCCT--TS------------CCCCSEEEE
T ss_pred             cEEEEEeECHHHHHHHHHHHHhCCC-eEEEEeCCCChhHHHHHHCCCeEEeeecc--cc------------cCCCCEEEE
Confidence            467778977778755 578999999 789998876 4566788899765332111  11            135788877


Q ss_pred             ccCCh
Q 018075          258 CVGFD  262 (361)
Q Consensus       258 ~~g~~  262 (361)
                      +.+-+
T Consensus        67 SsAI~   71 (89)
T d1j6ua1          67 TPAVR   71 (89)
T ss_dssp             CTTCC
T ss_pred             ecCcC
Confidence            65544

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=90.42  E-value=0.62  Score=38.79  Aligned_cols=75  Identities=24%  Similarity=0.288  Sum_probs=43.2

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeC-----ChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCcc
Q 018075          180 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDV-----DVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGID  253 (361)
Q Consensus       180 ~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~-----~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  253 (361)
                      .+|||.| +|-+|...+..+...|. .|++++.     ..++.+.+...+--..+..+  -.+.. .+.++..  +.++|
T Consensus         1 ~KILVTGatGfIGs~lv~~Ll~~g~-~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~D--i~~~~-~l~~~~~--~~~~d   74 (338)
T d1orra_           1 AKLLITGGCGFLGSNLASFALSQGI-DLIVFDNLSRKGATDNLHWLSSLGNFEFVHGD--IRNKN-DVTRLIT--KYMPD   74 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSTTHHHHHHHHHTTCCCEEEECC--TTCHH-HHHHHHH--HHCCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCCcccchhHHHHhhccCCcEEEEcc--cCCHH-HHHHHHH--hcCCc
Confidence            3799998 69999999998888898 5777752     11233344443322222211  12221 1222211  34689


Q ss_pred             EEEEccC
Q 018075          254 VSFDCVG  260 (361)
Q Consensus       254 ~vld~~g  260 (361)
                      +||.+.+
T Consensus        75 ~Vih~aa   81 (338)
T d1orra_          75 SCFHLAG   81 (338)
T ss_dssp             EEEECCC
T ss_pred             eEEeecc
Confidence            9999875

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=90.24  E-value=0.067  Score=40.79  Aligned_cols=83  Identities=18%  Similarity=0.118  Sum_probs=54.9

Q ss_pred             EEEEECCCHHHHHHHHHHHHc-CCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEcc
Q 018075          181 NVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV  259 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  259 (361)
                      +|.|+|+|.+|...+..++.. +++.+.++++++++.      .......+    .+...    .    ...+|+|+.|.
T Consensus         5 rvgiiG~G~ig~~~~~~l~~~~~~elvav~~~~~~~~------~~~~~~~~----~~~~~----~----~~~~D~Vvi~t   66 (170)
T d1f06a1           5 RVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATLD------TKTPVFDV----ADVDK----H----ADDVDVLFLCM   66 (170)
T ss_dssp             EEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCCS------SSSCEEEG----GGGGG----T----TTTCSEEEECS
T ss_pred             eEEEECChHHHHHHHHHHHhCCCcEEEEEEecccccc------cccccccc----hhhhh----h----ccccceEEEeC
Confidence            689999999998888777665 564444445554321      11111111    11111    1    24699999999


Q ss_pred             CChHHHHHHHHhhcCCCEEEEE
Q 018075          260 GFDKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       260 g~~~~~~~~~~~l~~~G~~v~~  281 (361)
                      +...+.+.+.++|..|-.++.+
T Consensus        67 p~~~h~~~a~~aL~aG~~vv~~   88 (170)
T d1f06a1          67 GSATDIPEQAPKFAQFACTVDT   88 (170)
T ss_dssp             CTTTHHHHHHHHHTTTSEEECC
T ss_pred             CCcccHHHHHHHHHCCCcEEEe
Confidence            9888999999999999987754

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=90.22  E-value=0.15  Score=37.83  Aligned_cols=83  Identities=17%  Similarity=0.055  Sum_probs=49.8

Q ss_pred             EEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccCCh
Q 018075          183 MIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVGFD  262 (361)
Q Consensus       183 lI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~  262 (361)
                      -++|+|.+|.+.++.++. +.....+.+++.++.+.+.+.+......   . .+.           -...|+||-|+..+
T Consensus         3 gfIG~G~mg~~l~~~L~~-~~~~~~v~~R~~~~~~~l~~~~~~~~~~---~-~~~-----------~~~~DiVil~v~d~   66 (153)
T d2i76a2           3 NFVGTGTLTRFFLECLKD-RYEIGYILSRSIDRARNLAEVYGGKAAT---L-EKH-----------PELNGVVFVIVPDR   66 (153)
T ss_dssp             EEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCCCCCS---S-CCC-----------CC---CEEECSCTT
T ss_pred             EEEeCcHHHHHHHHHHHh-CCCEEEEEeCChhhhcchhhcccccccc---h-hhh-----------hccCcEEEEeccch
Confidence            357999999998886654 4433445678888877666655432211   1 111           24689999999865


Q ss_pred             HHHHHHHHhhcCCCEE-EEEc
Q 018075          263 KTMSTALNATRPGGKV-CLIG  282 (361)
Q Consensus       263 ~~~~~~~~~l~~~G~~-v~~g  282 (361)
                       .+....+.|...+++ +.+.
T Consensus        67 -~i~~v~~~l~~~~~ivi~~s   86 (153)
T d2i76a2          67 -YIKTVANHLNLGDAVLVHCS   86 (153)
T ss_dssp             -THHHHHTTTCCSSCCEEECC
T ss_pred             -hhhHHHhhhcccceeeeecc
Confidence             788888888755544 4443

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=90.17  E-value=0.53  Score=37.84  Aligned_cols=32  Identities=28%  Similarity=0.319  Sum_probs=26.6

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075          181 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDV  213 (361)
Q Consensus       181 ~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~  213 (361)
                      .|||.| ++++|.+.++.+...|+ .|+.+++++
T Consensus         3 VvlITGas~GIG~aiA~~la~~Ga-~V~~~~~~~   35 (257)
T d1fjha_           3 IIVISGCATGIGAATRKVLEAAGH-QIVGIDIRD   35 (257)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCh
Confidence            467888 68999999999999999 578887764

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=89.98  E-value=0.52  Score=34.76  Aligned_cols=93  Identities=11%  Similarity=0.117  Sum_probs=53.8

Q ss_pred             CCCCEEEEECC--CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCE-EeecCCCccchhHHHHHHHhhcC
Q 018075          177 GPETNVMIMGS--GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADE-TAKVSTDIEDVDTDVGKIQNAMG  249 (361)
Q Consensus       177 ~~g~~vlI~G~--g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~-~~~~~~~~~~~~~~~~~~~~~~~  249 (361)
                      -+|.+||=.+|  |.+|.   ..+ ..|+..|+.++.+++..+.+++    ++... +..+.   .+..+.+..    ..
T Consensus        13 ~~g~~vlDl~~GtG~~~i---ea~-~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~---~D~~~~l~~----~~   81 (152)
T d2esra1          13 FNGGRVLDLFAGSGGLAI---EAV-SRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLK---MEAERAIDC----LT   81 (152)
T ss_dssp             CCSCEEEEETCTTCHHHH---HHH-HTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEEC---SCHHHHHHH----BC
T ss_pred             CCCCeEEEcCCccCHHHH---HHH-HhCcceeeeehhchhhhhhhhhhhhhcccccchhhhc---ccccccccc----cc
Confidence            36888888854  55555   333 4788899999999887665544    56543 22222   243333322    35


Q ss_pred             CCccEEEEccC-ChHHHHHHHH------hhcCCCEEEE
Q 018075          250 SGIDVSFDCVG-FDKTMSTALN------ATRPGGKVCL  280 (361)
Q Consensus       250 ~~~d~vld~~g-~~~~~~~~~~------~l~~~G~~v~  280 (361)
                      .++|+||--.+ ........++      .|+++|.++.
T Consensus        82 ~~fDiIf~DPPy~~~~~~~~l~~i~~~~~L~~~g~iii  119 (152)
T d2esra1          82 GRFDLVFLDPPYAKETIVATIEALAAKNLLSEQVMVVC  119 (152)
T ss_dssp             SCEEEEEECCSSHHHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred             cccceeEechhhccchHHHHHHHHHHCCCcCCCeEEEE
Confidence            68999986432 1122233333      3567777664

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=89.79  E-value=1.5  Score=31.16  Aligned_cols=72  Identities=17%  Similarity=0.185  Sum_probs=45.0

Q ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEcc
Q 018075          181 NVMIMGS-GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCV  259 (361)
Q Consensus       181 ~vlI~G~-g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~  259 (361)
                      +|.|+|+ |-+|++..+++...+.+.+..++.+..                    ..            -.++|+++|.+
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~--------------------~~------------~~~~DVvIDFS   49 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGV--------------------EE------------LDSPDVVIDFS   49 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEE--------------------EE------------CSCCSEEEECS
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcH--------------------HH------------hccCCEEEEec
Confidence            6889994 999999999999888854444432210                    00            13467888877


Q ss_pred             CChHHHHHHHHhhcCCCEEEEEccCC
Q 018075          260 GFDKTMSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       260 g~~~~~~~~~~~l~~~G~~v~~g~~~  285 (361)
                      ... .+...++.....+.=+.+|.++
T Consensus        50 ~p~-~~~~~l~~~~~~~~p~ViGTTG   74 (128)
T d1vm6a3          50 SPE-ALPKTVDLCKKYRAGLVLGTTA   74 (128)
T ss_dssp             CGG-GHHHHHHHHHHHTCEEEECCCS
T ss_pred             CHH-HHHHHHHHHHhcCCCEEEEcCC
Confidence            644 5555555544444445566554

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=89.51  E-value=0.34  Score=36.91  Aligned_cols=38  Identities=18%  Similarity=0.369  Sum_probs=31.1

Q ss_pred             EEEEE-CCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHH
Q 018075          181 NVMIM-GSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIA  219 (361)
Q Consensus       181 ~vlI~-G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~  219 (361)
                      +|.|+ |+|.+|.+.++.+...|. .|+..++++++.+.+
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~-~V~l~~R~~e~~~~l   40 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGH-EIVVGSRREEKAEAK   40 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHH
Confidence            57888 589999999999999999 577778888776544

>d1jsxa_ c.66.1.20 (A:) Glucose-inhibited division protein B (GidB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glucose-inhibited division protein B (GidB)
domain: Glucose-inhibited division protein B (GidB)
species: Escherichia coli [TaxId: 562]

Probab=89.35  E-value=0.45  Score=37.21  Aligned_cols=96  Identities=15%  Similarity=0.169  Sum_probs=61.5

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhhcCCCc
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      -++++++=+|+|+ |.-.+-+|-...-..++.++++..|..++++    +|...+..+..+.++..         ....|
T Consensus        64 ~~~~~ilDiGsGa-G~PGi~laI~~p~~~~~Lves~~KK~~FL~~~~~~L~L~nv~v~~~R~E~~~---------~~~~f  133 (207)
T d1jsxa_          64 LQGERFIDVGTGP-GLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP---------SEPPF  133 (207)
T ss_dssp             CCSSEEEEETCTT-TTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC---------CCSCE
T ss_pred             hcCCceeeeeccC-CceeeehhhhcccceEEEEecchHHHHHHHHHHHHcCCcceeeeccchhhhc---------ccccc
Confidence            3567888788765 6555566665543479999999999877655    77765444333323221         13468


Q ss_pred             cEEEE-ccCCh-HHHHHHHHhhcCCCEEEEEc
Q 018075          253 DVSFD-CVGFD-KTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       253 d~vld-~~g~~-~~~~~~~~~l~~~G~~v~~g  282 (361)
                      |+|.. +++.. ..+..+...+.++|+++.+-
T Consensus       134 D~V~sRA~~~~~~ll~~~~~~l~~~g~~~~~K  165 (207)
T d1jsxa_         134 DGVISRAFASLNDMVSWCHHLPGEQGRFYALK  165 (207)
T ss_dssp             EEEECSCSSSHHHHHHHHTTSEEEEEEEEEEE
T ss_pred             ceehhhhhcCHHHHHHHHHHhcCCCcEEEEEC
Confidence            98875 44433 24555566788999998873

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=89.30  E-value=0.22  Score=41.62  Aligned_cols=37  Identities=19%  Similarity=0.366  Sum_probs=31.1

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  213 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~  213 (361)
                      .....+|+|+|+|..|+.++..++..|. .|..++.++
T Consensus        27 ~~~pkkV~IIGaG~aGLsaA~~L~~~G~-~V~vlE~~~   63 (370)
T d2iida1          27 TSNPKHVVIVGAGMAGLSAAYVLAGAGH-QVTVLEASE   63 (370)
T ss_dssp             CSSCCEEEEECCBHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             CCCCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            4456799999999999999998888998 688887653

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=89.27  E-value=1.7  Score=32.94  Aligned_cols=105  Identities=18%  Similarity=0.224  Sum_probs=64.7

Q ss_pred             hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCC
Q 018075          173 RANVGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSG  251 (361)
Q Consensus       173 ~~~~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (361)
                      ...+++|..+ |-+ .|+=|+. -.+++. +. +|+++|.+++..+.++++-......+..+-.++.+.+.   ..+-.+
T Consensus        13 ~l~~~~g~~~-vD~T~G~GGhs-~~iL~~-~~-~viaiD~D~~ai~~a~~~~~~~~~~~~~~f~~~~~~l~---~~~~~~   85 (182)
T d1wg8a2          13 LLAVRPGGVY-VDATLGGAGHA-RGILER-GG-RVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKRHLA---ALGVER   85 (182)
T ss_dssp             HHTCCTTCEE-EETTCTTSHHH-HHHHHT-TC-EEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHHHHH---HTTCSC
T ss_pred             hcCCCCCCEE-EEeCCCCcHHH-HHHhcc-cC-cEEEEhhhhhHHHHHhhccccceeEeehHHHHHHHHHH---HcCCCc
Confidence            3567888875 444 3443443 445554 44 79999999999998888654443333333233333332   223457


Q ss_pred             ccEEEEccCChH---------------HHHHHHHhhcCCCEEEEEccC
Q 018075          252 IDVSFDCVGFDK---------------TMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       252 ~d~vld~~g~~~---------------~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      +|.||=-.|...               .++...+.|.++|+++.+...
T Consensus        86 vdgIl~DLGvSs~qld~~~re~~~~~~~L~~~~~~lk~gg~~~ii~fh  133 (182)
T d1wg8a2          86 VDGILADLGVSSFHLDDPSDELNALKEFLEQAAEVLAPGGRLVVIAFH  133 (182)
T ss_dssp             EEEEEEECSCCHHHHHCGGTHHHHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred             cCEEEEEccCCHHHhhcchHHHHHHHHHHHHHHhhhCCCCeEEEEecc
Confidence            888865555431               356677889999998877543

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=89.16  E-value=1.4  Score=33.06  Aligned_cols=97  Identities=19%  Similarity=0.206  Sum_probs=60.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEE-eCC-hhHHHHHHHcCCCE--------------------EeecCCCccchh
Q 018075          181 NVMIMGSGPIGLVTLLAARAFGAPRIIIT-DVD-VQRLSIARNLGADE--------------------TAKVSTDIEDVD  238 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~g~~~vv~v-~~~-~~~~~~~~~lg~~~--------------------~~~~~~~~~~~~  238 (361)
                      +|.|.|-|-+|..+.+.+...+.+ ++++ +.. .+...++-++...+                    +..+..  .+..
T Consensus         2 kigINGfGRIGR~~~R~l~~~~i~-iv~INd~~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~--~~p~   78 (168)
T d2g82a1           2 KVGINGFGRIGRQVFRILHSRGVE-VALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAV--KDPK   78 (168)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTCC-EEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECC--SSGG
T ss_pred             EEEEECCcHHHHHHHHHHhcCCCE-EEEECCCcchhhhhheeecccccCccccccccccceeEecceeEEEEec--CChH
Confidence            688999999999999988888886 4444 432 23333443332110                    011111  1111


Q ss_pred             HHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCC
Q 018075          239 TDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       239 ~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~  285 (361)
                          ++.+ ...++|+|+||+|.-...+.+..++..+.+=|.+..+.
T Consensus        79 ----~i~W-~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP~  120 (168)
T d2g82a1          79 ----EIPW-AEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPA  120 (168)
T ss_dssp             ----GCCT-GGGTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred             ----HCcc-cccCCceeEeccccccchHHhhhhhccccceeeecccc
Confidence                1111 13579999999997767788888998887777776544

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=89.14  E-value=3.2  Score=30.61  Aligned_cols=40  Identities=20%  Similarity=0.433  Sum_probs=33.3

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHH
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRL  216 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~  216 (361)
                      .+..+|.|+|+|.+|..++..+...| ++.++.+|.++++.
T Consensus        18 ~~~~KV~IIGaG~VG~~~A~~l~~~~l~~ElvLiD~~~~~a   58 (160)
T d1i0za1          18 VPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKL   58 (160)
T ss_dssp             CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHH
T ss_pred             CCCCeEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccchh
Confidence            45679999999999999999888887 46689999887654

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=89.03  E-value=2.6  Score=34.88  Aligned_cols=104  Identities=15%  Similarity=0.161  Sum_probs=60.6

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCE-EeecCCCccchhHHHHHHHhhc
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADE-TAKVSTDIEDVDTDVGKIQNAM  248 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~-~~~~~~~~~~~~~~~~~~~~~~  248 (361)
                      ....++.+||=..||. |.+++..++ .|+ .|+.++.++...+.+++    .|... -+.+..  .|..+.+++... .
T Consensus       128 ~~~~~~~rVLdlf~~t-G~~sl~aa~-~GA-~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~--~D~~~~l~~~~~-~  201 (309)
T d2igta1         128 ETADRPLKVLNLFGYT-GVASLVAAA-AGA-EVTHVDASKKAIGWAKENQVLAGLEQAPIRWIC--EDAMKFIQREER-R  201 (309)
T ss_dssp             HHSSSCCEEEEETCTT-CHHHHHHHH-TTC-EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEEC--SCHHHHHHHHHH-H
T ss_pred             hhccCCCeEEEecCCC-cHHHHHHHh-CCC-eEEEEeChHHHHHHHHHhhhhhcccCCcEEEEe--CCHHHhHHHHhh-c
Confidence            3456789999885432 334444443 688 69999999998888865    23221 111111  355555554432 2


Q ss_pred             CCCccEEEEccC-----C-----------hHHHHHHHHhhcCCCEEEEEcc
Q 018075          249 GSGIDVSFDCVG-----F-----------DKTMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       249 ~~~~d~vld~~g-----~-----------~~~~~~~~~~l~~~G~~v~~g~  283 (361)
                      +..||+||---.     .           ....+.+...|.++|.++++..
T Consensus       202 ~~~fD~IilDPP~f~~~~~~~~~~~~~~~~~l~~~~~~ll~~~g~~ll~t~  252 (309)
T d2igta1         202 GSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTA  252 (309)
T ss_dssp             TCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEE
T ss_pred             CCCCCEEEECCCcccccccchhHHHHHHHHHHHHHHHHhcCCCCCEEEEec
Confidence            578999974211     0           0234456678889997666543

>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Indolethylamine N-methyltransferase, INMT
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.99  E-value=0.045  Score=44.64  Aligned_cols=45  Identities=20%  Similarity=0.233  Sum_probs=33.3

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN  221 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~  221 (361)
                      ...+|.+||=+|||. |..+..+++. ++..|+++|.++...+.+++
T Consensus        48 ~~~~g~~vLDlGcG~-G~~~~~~~~~-~~~~v~giD~S~~~i~~a~~   92 (257)
T d2a14a1          48 GGLQGDTLIDIGSGP-TIYQVLAACD-SFQDITLSDFTDRNREELEK   92 (257)
T ss_dssp             TSCCEEEEEESSCTT-CCGGGTTGGG-TEEEEEEEESCHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCC-CHhHHHHhcc-ccCcEEEecCCHHHHHHHHH
Confidence            456788999999876 5555555544 45479999999998887765

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=88.97  E-value=3.3  Score=34.32  Aligned_cols=112  Identities=21%  Similarity=0.215  Sum_probs=72.1

Q ss_pred             HHhcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCEEEEE--eCChhHHHHHHHcCCCEEeecC----------------
Q 018075          171 CRRANVGPETNVMIM-GSGPIGLVTLLAARAFGAPRIIIT--DVDVQRLSIARNLGADETAKVS----------------  231 (361)
Q Consensus       171 l~~~~~~~g~~vlI~-G~g~~G~~ai~la~~~g~~~vv~v--~~~~~~~~~~~~lg~~~~~~~~----------------  231 (361)
                      .++..++++...+|. .+|..|.+.+..++.+|.+.++.+  ..++.+.+.++.+|+..+....                
T Consensus        56 ~~~g~~~~~~~~vv~aSsGN~g~a~A~~a~~~g~~~~iv~p~~~~~~k~~~i~~~Ga~vi~~~~~~~~~~~~~~~~~~~~  135 (320)
T d1z7wa1          56 EKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILA  135 (320)
T ss_dssp             HHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHH
T ss_pred             HHcCCCCCCCceEEeeCCchHHHHHHHHHHhhccceEEeehhhhhhhhhhhhhccCcceEEeeccccccccchhHHHHHH
Confidence            345666777666665 589999999999999999655555  3456788889999987543210                


Q ss_pred             ---------CCcc------chhHHHHHHHhhcCCCccEEEEccCChHHHHHH---HHhhcCCCEEEEEc
Q 018075          232 ---------TDIE------DVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTA---LNATRPGGKVCLIG  282 (361)
Q Consensus       232 ---------~~~~------~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~---~~~l~~~G~~v~~g  282 (361)
                               ....      .......++.......+|.++-++|+..++.-.   ++...+.-+++.+.
T Consensus       136 ~~~~~~~~~~~~~~~n~~~g~~t~~~EI~~q~~~~~D~vv~~vGgGg~~~Gi~~~~k~~~~~~~~igve  204 (320)
T d1z7wa1         136 KTPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVE  204 (320)
T ss_dssp             HCTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             hCCCceecccccccchHHHhhhhHHHHHHHhccCCCCEEEeCCCCCcccchhhhhhhhhhcceeeeccc
Confidence                     0000      011111234444456799999999887655443   45567788887775

>d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Class I ketol-acid reductoisomerase (KARI)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.86  E-value=1.9  Score=32.28  Aligned_cols=88  Identities=17%  Similarity=0.175  Sum_probs=63.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      ++++|.|+|-|+=|.+-++-+|-.|.+++|+........+.+++-|....        ++.++.        ...|+|.-
T Consensus        15 k~k~IaViGYGsQG~AhAlNLrDSG~~V~VGLr~gs~s~~~A~~~Gf~v~--------~~~eA~--------~~aDiim~   78 (182)
T d1np3a2          15 QGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAHGLKVA--------DVKTAV--------AAADVVMI   78 (182)
T ss_dssp             HTSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHTTCEEE--------CHHHHH--------HTCSEEEE
T ss_pred             CCCEEEEEeeCcHhHHHHhhhhhcCCCEEEEcCCCCccHHHHhhhccccc--------cHHHHh--------hhcCeeee
Confidence            57899999999999999999999999888888666667778888787531        333333        35899988


Q ss_pred             ccCCh---HHHH-HHHHhhcCCCEEEEE
Q 018075          258 CVGFD---KTMS-TALNATRPGGKVCLI  281 (361)
Q Consensus       258 ~~g~~---~~~~-~~~~~l~~~G~~v~~  281 (361)
                      .+...   +.++ .+...|++|-.+.+.
T Consensus        79 L~PD~~q~~vy~~~I~p~lk~g~~L~Fa  106 (182)
T d1np3a2          79 LTPDEFQGRLYKEEIEPNLKKGATLAFA  106 (182)
T ss_dssp             CSCHHHHHHHHHHHTGGGCCTTCEEEES
T ss_pred             ecchHHHHHHHHHhhhhhcCCCcEEEEe
Confidence            87743   1232 344567777766553

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=88.85  E-value=1.9  Score=32.37  Aligned_cols=98  Identities=20%  Similarity=0.203  Sum_probs=58.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHc----CCCEEEEEe--CChhHHHHHHHcCCCE--------------------EeecCCCc
Q 018075          181 NVMIMGSGPIGLVTLLAARAF----GAPRIIITD--VDVQRLSIARNLGADE--------------------TAKVSTDI  234 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~----g~~~vv~v~--~~~~~~~~~~~lg~~~--------------------~~~~~~~~  234 (361)
                      +|.|.|-|-+|.++...+-..    .. .++++.  .+.+...++-++...+                    +..+..  
T Consensus         3 kigINGfGRIGR~v~R~~~~~~~~~~~-~vvaINd~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~--   79 (173)
T d1obfo1           3 RVAINGYGRIGRNILRAHYEGGKSHDI-EIVAINDLGDPKTNAHLTRYDTAHGKFPGTVSVNGSYMVVNGDKIRVDAN--   79 (173)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTSCSSE-EEEEEECSSCHHHHHHHHHEETTTEECSSCEEEETTEEEETTEEEEEECC--
T ss_pred             EEEEECCcHHHHHHHHHHHhCCCCCCe-EEEEEcCCCChHHHHHhhcccccCCCcCceEEeccceEEECCEEEEEEec--
Confidence            688999999999988766433    23 355553  2334444443332111                    111111  


Q ss_pred             cchhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC
Q 018075          235 EDVDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT  286 (361)
Q Consensus       235 ~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  286 (361)
                      .+..    ++.+ ...++|+||||+|.-...+.+..+|..|.+-|.+..+..
T Consensus        80 ~~p~----~i~W-~~~gvDiViEcTG~f~~~~~a~~hl~~GakkViiSAP~~  126 (173)
T d1obfo1          80 RNPA----QLPW-GALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPGG  126 (173)
T ss_dssp             SCGG----GSCT-TTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCCC
T ss_pred             CCHH----HCcc-cccccceEEEecccccCHHHHHHHhccCCcceEEecCCC
Confidence            1111    1111 246899999999976567788899998988888875543

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=88.83  E-value=0.16  Score=41.86  Aligned_cols=32  Identities=28%  Similarity=0.425  Sum_probs=28.3

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075          181 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  213 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~  213 (361)
                      +|+|+|+|+.|++++..++..|. .|++++..+
T Consensus         4 ~V~IvGaGp~Gl~~A~~L~~~G~-~v~vlE~~~   35 (292)
T d1k0ia1           4 QVAIIGAGPSGLLLGQLLHKAGI-DNVILERQT   35 (292)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTC-CEEEECSSC
T ss_pred             CEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence            68999999999999999999999 588887764

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=88.82  E-value=0.19  Score=40.40  Aligned_cols=33  Identities=18%  Similarity=0.367  Sum_probs=27.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075          181 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  213 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~  213 (361)
                      +|+|+|+|+.|+.++..++..|.+.|.+.+.++
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGAGMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECCcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            589999999999999999889974577777653

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=88.73  E-value=0.67  Score=38.98  Aligned_cols=35  Identities=20%  Similarity=0.059  Sum_probs=25.7

Q ss_pred             CCEEEEECCC---HHHHHHHHHHHHcCCCEEEEEeCChh
Q 018075          179 ETNVMIMGSG---PIGLVTLLAARAFGAPRIIITDVDVQ  214 (361)
Q Consensus       179 g~~vlI~G~g---~~G~~ai~la~~~g~~~vv~v~~~~~  214 (361)
                      ++..||.|+|   ++|.+.++.+...|++ |+.+..+..
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~-V~i~~~~~~   39 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVK-IIFGIWPPV   39 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCE-EEEEECGGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCE-EEEEeCchh
Confidence            3556888943   8999999999999994 665555444

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=88.73  E-value=0.41  Score=33.63  Aligned_cols=38  Identities=21%  Similarity=0.270  Sum_probs=31.3

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  213 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~  213 (361)
                      .++..++|+|+|+|.+|.=+++.++.+|. .|..+.+.+
T Consensus        18 ~l~~p~~v~IiGgG~iG~E~A~~l~~~g~-~Vtlv~~~~   55 (117)
T d1onfa2          18 NIKESKKIGIVGSGYIAVELINVIKRLGI-DSYIFARGN   55 (117)
T ss_dssp             TCCCCSEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSS
T ss_pred             ccCCCCEEEEECCchHHHHHHHHHHhccc-cceeeehhc
Confidence            44557899999999999999999999999 577776543

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=88.67  E-value=0.67  Score=33.65  Aligned_cols=37  Identities=32%  Similarity=0.485  Sum_probs=28.6

Q ss_pred             EEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHH
Q 018075          181 NVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLS  217 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~  217 (361)
                      +|.|+|+|.+|...+..+...+ +..++-.|.++++.+
T Consensus         2 KI~IIGaG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~   39 (140)
T d1a5za1           2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAE   39 (140)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHH
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCCEEEEEeccccccc
Confidence            6788999999998888666665 346888898876543

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=88.65  E-value=0.4  Score=38.83  Aligned_cols=40  Identities=15%  Similarity=0.198  Sum_probs=31.7

Q ss_pred             HHHhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEe
Q 018075          170 ACRRAN-VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITD  210 (361)
Q Consensus       170 ~l~~~~-~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~  210 (361)
                      +++..+ --+|.+|+|.|.|.+|..+++++...|+ +++++.
T Consensus        26 ~~~~~~~~l~g~~v~IQGfGnVG~~~a~~L~e~Ga-kvvavs   66 (255)
T d1bgva1          26 VMKHENDTLVGKTVALAGFGNVAWGAAKKLAELGA-KAVTLS   66 (255)
T ss_dssp             HHHHTTCCSTTCEEEECCSSHHHHHHHHHHHHHTC-EEEEEE
T ss_pred             HHHhCCCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEe
Confidence            344433 3478999999999999999999999999 566653

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=88.65  E-value=0.43  Score=33.73  Aligned_cols=37  Identities=27%  Similarity=0.560  Sum_probs=31.4

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  213 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~  213 (361)
                      ++++++++|+|+|.+|.=++..++..|. .|..+..++
T Consensus        27 ~~~~~~vvIIGgG~iG~E~A~~l~~~g~-~Vtli~~~~   63 (121)
T d1d7ya2          27 LRPQSRLLIVGGGVIGLELAATARTAGV-HVSLVETQP   63 (121)
T ss_dssp             CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred             hhcCCeEEEECcchhHHHHHHHhhcccc-eEEEEeecc
Confidence            5678999999999999999999999999 577776654

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=88.64  E-value=0.4  Score=33.54  Aligned_cols=35  Identities=23%  Similarity=0.381  Sum_probs=29.4

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  213 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~  213 (361)
                      ..++++|+|+|.+|.=+++.+..+|. .|..+.+.+
T Consensus        21 ~p~~v~IiGgG~ig~E~A~~l~~~G~-~Vtlve~~~   55 (117)
T d1ebda2          21 VPKSLVVIGGGYIGIELGTAYANFGT-KVTILEGAG   55 (117)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred             cCCeEEEECCCccceeeeeeeccccc-EEEEEEecc
Confidence            34899999999999999999999999 566665554

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=88.64  E-value=0.67  Score=38.00  Aligned_cols=34  Identities=26%  Similarity=0.407  Sum_probs=26.9

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVD  212 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~  212 (361)
                      +-.+|||.| +|-+|...+..+...|.+ |++++++
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G~~-V~~~~R~   36 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLGHP-TYVLFRP   36 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCC-EEEECCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCE-EEEEECC
Confidence            346799998 599999999988889985 6666554

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=88.61  E-value=1.9  Score=32.26  Aligned_cols=43  Identities=16%  Similarity=0.190  Sum_probs=36.1

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCC
Q 018075          181 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA  224 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~  224 (361)
                      +|-|+|.|.+|...+.-+...|. .|.+.++++++.+.+.+.+.
T Consensus         3 kIGvIGlG~MG~~ma~~L~~~G~-~V~~~dr~~~~~~~l~~~~~   45 (178)
T d1pgja2           3 DVGVVGLGVMGANLALNIAEKGF-KVAVFNRTYSKSEEFMKANA   45 (178)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHTT
T ss_pred             EEEEEeehHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCC
Confidence            47789999999999988888899 58889999999887766554

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=88.42  E-value=1.4  Score=33.34  Aligned_cols=88  Identities=16%  Similarity=0.100  Sum_probs=47.8

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC--hhHHHHHHHcCCCEEe--ecCCCccchhHHHHHHHhhcCCCccEEE
Q 018075          181 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVD--VQRLSIARNLGADETA--KVSTDIEDVDTDVGKIQNAMGSGIDVSF  256 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~--~~~~~~~~~lg~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~d~vl  256 (361)
                      +|.|+|+|..|.+.+..+...|- .|....+.  ++..+...+-......  ......-.....+.+.    -.+.|+|+
T Consensus         2 kI~ViGaG~~GtalA~~la~~g~-~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~ad~Ii   76 (180)
T d1txga2           2 IVSILGAGAMGSALSVPLVDNGN-EVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKC----LENAEVVL   76 (180)
T ss_dssp             EEEEESCCHHHHHHHHHHHHHCC-EEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHH----HTTCSEEE
T ss_pred             EEEEECCCHHHHHHHHHHHHCCC-EEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHH----Hhccchhh
Confidence            68899999999999888877777 45555443  3333333322211000  0000000011112221    24789999


Q ss_pred             EccCChHHHHHHHHhhcC
Q 018075          257 DCVGFDKTMSTALNATRP  274 (361)
Q Consensus       257 d~~g~~~~~~~~~~~l~~  274 (361)
                      -++... .+...++.+.+
T Consensus        77 ~avps~-~~~~~~~~l~~   93 (180)
T d1txga2          77 LGVSTD-GVLPVMSRILP   93 (180)
T ss_dssp             ECSCGG-GHHHHHHHHTT
T ss_pred             cccchh-hhHHHHHhhcc
Confidence            999976 56666665443

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=88.09  E-value=0.26  Score=38.46  Aligned_cols=87  Identities=23%  Similarity=0.209  Sum_probs=54.4

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      .|.+|.|+|.|.+|..++++++.+|+ .|++.+....+..   ....    .+    .++.+.+        ...|++.-
T Consensus        44 ~~ktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~~---~~~~----~~----~~l~~l~--------~~~D~v~~  103 (199)
T d1dxya1          44 GQQTVGVMGTGHIGQVAIKLFKGFGA-KVIAYDPYPMKGD---HPDF----DY----VSLEDLF--------KQSDVIDL  103 (199)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSSC---CTTC----EE----CCHHHHH--------HHCSEEEE
T ss_pred             cceeeeeeecccccccccccccccce-eeeccCCccchhh---hcch----hH----HHHHHHH--------Hhccccee
Confidence            46899999999999999999999999 6888876533210   0000    11    1222222        23677776


Q ss_pred             ccCChH-----HHHHHHHhhcCCCEEEEEccC
Q 018075          258 CVGFDK-----TMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       258 ~~g~~~-----~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      +.....     .-...++.|+++..++-++..
T Consensus       104 ~~plt~~T~~li~~~~l~~mk~~a~lIN~aRG  135 (199)
T d1dxya1         104 HVPGIEQNTHIINEAAFNLMKPGAIVINTARP  135 (199)
T ss_dssp             CCCCCGGGTTSBCHHHHHHSCTTEEEEECSCT
T ss_pred             eecccccccccccHHHhhccCCceEEEecccH
Confidence            554221     124567788888877665543

>d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TRM1-like
domain: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=88.06  E-value=0.89  Score=38.99  Aligned_cols=98  Identities=14%  Similarity=0.130  Sum_probs=63.1

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc----CCCEEe--------ec----CCCccchhHHHHH
Q 018075          180 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL----GADETA--------KV----STDIEDVDTDVGK  243 (361)
Q Consensus       180 ~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l----g~~~~~--------~~----~~~~~~~~~~~~~  243 (361)
                      .+||= +-++.|.-++.+|+..|++.|++.|.+++..+++++-    +.....        ..    .....+....+.+
T Consensus        47 ~~vLD-~~sasG~rsiRya~E~~~~~V~~nDis~~A~~~i~~N~~lN~~~~~~~~~~~~~~~~~~~~~~~~~Da~~~~~~  125 (375)
T d2dula1          47 KIVLD-ALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAE  125 (375)
T ss_dssp             SEEEE-SSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHH
T ss_pred             CEEEE-cCCCccHHHHHHHHhCCCCEEEEecCCHHHHHHHHHHHHhcCccccccccccccccccceeEeehhhhhhhhHh
Confidence            44433 4455588888999989998999999999998888752    221100        00    0011222222222


Q ss_pred             HHhhcCCCccEE-EEccCCh-HHHHHHHHhhcCCCEEEEEc
Q 018075          244 IQNAMGSGIDVS-FDCVGFD-KTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       244 ~~~~~~~~~d~v-ld~~g~~-~~~~~~~~~l~~~G~~v~~g  282 (361)
                          .+..||+| ||..|++ ..++.+++.++.+|-+....
T Consensus       126 ----~~~~fDvIDiDPfGs~~pfldsAi~a~~~~Gll~vTa  162 (375)
T d2dula1         126 ----RHRYFHFIDLDPFGSPMEFLDTALRSAKRRGILGVTA  162 (375)
T ss_dssp             ----STTCEEEEEECCSSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ----hcCcCCcccCCCCCCcHHHHHHHHHHhccCCEEEEEe
Confidence                35679976 7888875 47888999999999777654

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=87.96  E-value=1.2  Score=32.51  Aligned_cols=35  Identities=14%  Similarity=0.149  Sum_probs=27.2

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHH
Q 018075          181 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRL  216 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~  216 (361)
                      +|-|+|.|.+|...+.-++..|. .+++.+....+.
T Consensus         2 kIgiIG~G~mG~~ia~~l~~~g~-~v~~~~~~~~~~   36 (152)
T d1i36a2           2 RVGFIGFGEVAQTLASRLRSRGV-EVVTSLEGRSPS   36 (152)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTC-EEEECCTTCCHH
T ss_pred             EEEEEcHHHHHHHHHHHHHHCCC-eEEEEcCchhHH
Confidence            57889999999999998888898 466665554443

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=87.87  E-value=0.37  Score=36.90  Aligned_cols=84  Identities=13%  Similarity=0.126  Sum_probs=56.5

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      .|.+|.|+|.|.+|...+++++.+|+ .|++.++.+..       +...   +   ..++.+    +.    ...|+|+-
T Consensus        41 ~gk~vgIiG~G~IG~~va~~l~~~g~-~v~~~d~~~~~-------~~~~---~---~~~l~e----ll----~~sDiv~~   98 (181)
T d1qp8a1          41 QGEKVAVLGLGEIGTRVGKILAALGA-QVRGFSRTPKE-------GPWR---F---TNSLEE----AL----REARAAVC   98 (181)
T ss_dssp             TTCEEEEESCSTHHHHHHHHHHHTTC-EEEEECSSCCC-------SSSC---C---BSCSHH----HH----TTCSEEEE
T ss_pred             cCceEEEeccccccccceeeeecccc-ccccccccccc-------ccee---e---eechhh----hh----hccchhhc
Confidence            58899999999999999999999999 68888765421       1110   0   012222    21    46888887


Q ss_pred             ccCCh-H----HHHHHHHhhcCCCEEEEEcc
Q 018075          258 CVGFD-K----TMSTALNATRPGGKVCLIGL  283 (361)
Q Consensus       258 ~~g~~-~----~~~~~~~~l~~~G~~v~~g~  283 (361)
                      +..-. .    .-...++.|+++..++-++.
T Consensus        99 ~~pl~~~t~~li~~~~l~~mk~~ailIN~~R  129 (181)
T d1qp8a1          99 ALPLNKHTRGLVKYQHLALMAEDAVFVNVGR  129 (181)
T ss_dssp             CCCCSTTTTTCBCHHHHTTSCTTCEEEECSC
T ss_pred             ccccccccccccccceeeeccccceEEeccc
Confidence            66422 1    12567788899888876653

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=87.85  E-value=0.29  Score=41.55  Aligned_cols=36  Identities=19%  Similarity=0.191  Sum_probs=31.1

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChh
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ  214 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~  214 (361)
                      +|.+|||.| +|-+|...++.+...|. .|+++++...
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~-~V~~~~r~~~   43 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLTAP   43 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCC
Confidence            679999998 69999999999999999 5888877654

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=87.84  E-value=3.6  Score=29.71  Aligned_cols=40  Identities=28%  Similarity=0.438  Sum_probs=32.1

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHH
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLS  217 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~  217 (361)
                      ...+|.|+|+|.+|...+..+...| ++.++.+|.++++.+
T Consensus         4 ~~~KI~IIGaG~VG~~~A~~l~~~~~~~elvL~D~~~~~~~   44 (146)
T d1ez4a1           4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTK   44 (146)
T ss_dssp             TBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhcCCCcEEEEeecccchhH
Confidence            3468999999999999888777776 457999998887543

>d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Human(Homo sapiens), liver isoform [TaxId: 9606]

Probab=87.71  E-value=1.8  Score=32.29  Aligned_cols=100  Identities=22%  Similarity=0.224  Sum_probs=60.2

Q ss_pred             EEEEECCCHHHHHHHHHHHHc-CCCEEEEE-eC--ChhHHHHHHHcCCCE-----Ee-------ecCC------Cccchh
Q 018075          181 NVMIMGSGPIGLVTLLAARAF-GAPRIIIT-DV--DVQRLSIARNLGADE-----TA-------KVST------DIEDVD  238 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~-g~~~vv~v-~~--~~~~~~~~~~lg~~~-----~~-------~~~~------~~~~~~  238 (361)
                      +|.|.|-|-+|..+...+... .. .++++ +.  +.+...++-++...+     -+       .+..      +..+..
T Consensus         3 kIgINGFGRIGR~v~R~~~~~~~~-~ivaINd~~~~~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~~~~~~~p~   81 (169)
T d1u8fo1           3 KVGVNGFGRIGRLVTRAAFNSGKV-DIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDPS   81 (169)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSS-EEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred             EEEEECCcHHHHHHHHHHHHCCCc-EEEEecCCCccHHHHHHHHhhccccCCcCCeEEEECCEEEECCEEEEEEECCChh
Confidence            688999999999998766554 46 45555 42  334555554432111     00       0000      001111


Q ss_pred             HHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC
Q 018075          239 TDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT  286 (361)
Q Consensus       239 ~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  286 (361)
                          ++.. ...++|+|+||+|.-...+.+..++..|.+-|.+..+..
T Consensus        82 ----~i~W-~~~~vDiViEcTG~f~~~~~~~~hl~~gakkViiSaP~~  124 (169)
T d1u8fo1          82 ----KIKW-GDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSA  124 (169)
T ss_dssp             ----GCCT-TTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCCS
T ss_pred             ----hCCc-cccCCCEEEEecceeccHHHHHHHHhcCCceEeeccccc
Confidence                1111 245899999999976667778889998988888875543

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=87.61  E-value=3.3  Score=28.97  Aligned_cols=91  Identities=16%  Similarity=0.107  Sum_probs=60.3

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEccC
Q 018075          181 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDCVG  260 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g  260 (361)
                      .++|.|.|.+|..++..++  +. .+++++.++++.+.++..|...+. .+..  + .+.+++   .+-..++.++-+..
T Consensus         2 HivI~G~g~~g~~l~~~L~--~~-~i~vi~~d~~~~~~~~~~~~~~i~-Gd~~--~-~~~L~~---a~i~~A~~vi~~~~   71 (129)
T d2fy8a1           2 HVVICGWSESTLECLRELR--GS-EVFVLAEDENVRKKVLRSGANFVH-GDPT--R-VSDLEK---ANVRGARAVIVNLE   71 (129)
T ss_dssp             CEEEESCCHHHHHHHHTSC--GG-GEEEEESCTTHHHHHHHTTCEEEE-SCTT--S-HHHHHH---TTCTTCSEEEECCS
T ss_pred             EEEEECCCHHHHHHHHHHc--CC-CCEEEEcchHHHHHHHhcCccccc-cccC--C-HHHHHH---hhhhcCcEEEEecc
Confidence            5788999999998877664  44 467788888888888888875543 2221  1 223332   34567999998887


Q ss_pred             ChH---HHHHHHHhhcCCCEEEEE
Q 018075          261 FDK---TMSTALNATRPGGKVCLI  281 (361)
Q Consensus       261 ~~~---~~~~~~~~l~~~G~~v~~  281 (361)
                      .+.   ..-...+.+.|..+++..
T Consensus        72 ~d~~n~~~~~~~r~~~~~~~iia~   95 (129)
T d2fy8a1          72 SDSETIHCILGIRKIDESVRIIAE   95 (129)
T ss_dssp             SHHHHHHHHHHHHHHCSSSCEEEE
T ss_pred             chhhhHHHHHHHHHHCCCceEEEE
Confidence            663   233345667788776654

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=87.56  E-value=0.33  Score=37.56  Aligned_cols=90  Identities=19%  Similarity=0.261  Sum_probs=56.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      .|.++.|+|.|.+|...+++++.+|+ .|++.+...... .....+....       .++.+.+        ...|+|.-
T Consensus        48 ~gktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~-~~~~~~~~~~-------~~l~~ll--------~~sD~i~~  110 (193)
T d1mx3a1          48 RGETLGIIGLGRVGQAVALRAKAFGF-NVLFYDPYLSDG-VERALGLQRV-------STLQDLL--------FHSDCVTL  110 (193)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCTT-HHHHHTCEEC-------SSHHHHH--------HHCSEEEE
T ss_pred             eCceEEEeccccccccceeeeecccc-ceeeccCccccc-chhhhccccc-------cchhhcc--------ccCCEEEE
Confidence            57899999999999999999999999 677777654332 2233343221       1222222        23677766


Q ss_pred             ccCChH-----HHHHHHHhhcCCCEEEEEccC
Q 018075          258 CVGFDK-----TMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       258 ~~g~~~-----~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      +.....     .-...+..|+++..++-++..
T Consensus       111 ~~plt~~T~~li~~~~l~~mk~~a~lIN~sRG  142 (193)
T d1mx3a1         111 HCGLNEHNHHLINDFTVKQMRQGAFLVNTARG  142 (193)
T ss_dssp             CCCCCTTCTTSBSHHHHTTSCTTEEEEECSCT
T ss_pred             eecccccchhhhhHHHHhccCCCCeEEecCCc
Confidence            554221     123456777888766655443

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.48  E-value=0.79  Score=40.10  Aligned_cols=33  Identities=27%  Similarity=0.461  Sum_probs=29.2

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075          180 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  212 (361)
Q Consensus       180 ~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~  212 (361)
                      .+|||+|+|++|.-++..+-+.|...+..+|.+
T Consensus        38 ~kVlvvG~GglG~ei~k~L~~~Gvg~i~lvD~D   70 (426)
T d1yovb1          38 CKVLVIGAGGLGCELLKNLALSGFRQIHVIDMD   70 (426)
T ss_dssp             CCEEEECSSTTHHHHHHHHHTTTCCCEEEECCC
T ss_pred             CeEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence            689999999999999999989999888888753

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=87.40  E-value=1  Score=33.58  Aligned_cols=98  Identities=19%  Similarity=0.195  Sum_probs=58.9

Q ss_pred             EEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCCh--hHHHHHHHcCCCE--------------------EeecCCCccch
Q 018075          181 NVMIMGSGPIGLVTLLAARAFG-APRIIITDVDV--QRLSIARNLGADE--------------------TAKVSTDIEDV  237 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~--~~~~~~~~lg~~~--------------------~~~~~~~~~~~  237 (361)
                      +|.|.|-|-+|..+...+.... . .++++.-..  +...++-++-..+                    +..++..  +.
T Consensus         3 kigINGFGRIGR~v~R~~~~~~~i-~ivaINd~~~~~~~ayLl~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~--~p   79 (166)
T d1gado1           3 KVGINGFGRIGRIVFRAAQKRSDI-EIVAINDLLDADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAER--DP   79 (166)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCSSE-EEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCS--SG
T ss_pred             EEEEECCcHHHHHHHHHHhhCCCe-EEEEEeCCCCHHHHhhhheecCCCCCcCCeEEEeCCEEEECCEEEEEEeCC--Ch
Confidence            5789999999999998777663 5 455553322  2333333321100                    0011111  11


Q ss_pred             hHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC
Q 018075          238 DTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT  286 (361)
Q Consensus       238 ~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  286 (361)
                      .+    +.+ ...++|+||||+|.-...+.+..+|..|.+-|.+..+..
T Consensus        80 ~~----i~W-~~~gvDiViEcTG~f~t~~~~~~hl~~gakkViiSaP~~  123 (166)
T d1gado1          80 AN----LKW-DEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSK  123 (166)
T ss_dssp             GG----GCH-HHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCS
T ss_pred             HH----CCc-cccCCCEEEEccccccCHHHHHHHhcCCCceEEeecccc
Confidence            11    111 124799999999977677788899999988888875543

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=87.34  E-value=0.36  Score=40.48  Aligned_cols=35  Identities=23%  Similarity=0.274  Sum_probs=29.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  213 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~  213 (361)
                      +..+|+|+|||..|+.++..+...|. .|.+++.++
T Consensus         1 k~KKI~IIGaG~sGL~aA~~L~k~G~-~V~viEk~~   35 (314)
T d2bi7a1           1 KSKKILIVGAGFSGAVIGRQLAEKGH-QVHIIDQRD   35 (314)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSS
T ss_pred             CCCEEEEECCcHHHHHHHHHHHhCCC-CEEEEECCC
Confidence            35789999999999999999888898 688887654

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=87.12  E-value=1.6  Score=32.22  Aligned_cols=128  Identities=13%  Similarity=0.087  Sum_probs=73.6

Q ss_pred             EEEEECCCHHHHH-HHHHHHHc-CCCEEEEEeCChhH-HHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          181 NVMIMGSGPIGLV-TLLAARAF-GAPRIIITDVDVQR-LSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       181 ~vlI~G~g~~G~~-ai~la~~~-g~~~vv~v~~~~~~-~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      ++.|+|+|.+|.- .+...+.. +++.+.+.+.++++ .+++++++...   + +   +..+    +.    ..+|+|+.
T Consensus         3 ri~iIG~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~---~-~---~~~~----l~----~~~D~V~I   67 (164)
T d1tlta1           3 RIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPY---A-D---SLSS----LA----ASCDAVFV   67 (164)
T ss_dssp             EEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCB---C-S---SHHH----HH----TTCSEEEE
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcccccc---c-c---cchh----hh----hhcccccc
Confidence            5789999998863 45555544 66444455666654 45667777642   1 1   2211    21    35899999


Q ss_pred             ccCChHHHHHHHHhhcCCCEEEEEccCCCCcceechH----hhhcCcEE-EEeecC--CCcHHHHHHHHHcCCC
Q 018075          258 CVGFDKTMSTALNATRPGGKVCLIGLAKTEMTVALTP----AAAREVDV-IGIFRY--RSTWPLCIEFLRSGKI  324 (361)
Q Consensus       258 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~----~~~~~~~i-~~~~~~--~~~~~~~~~~l~~g~~  324 (361)
                      ++....+.+.+...|..|=. +.+.-+.....-....    .-..+..+ .+....  +...+.+.+++++|.+
T Consensus        68 ~tp~~~h~~~~~~al~~gk~-V~~EKPla~~~~e~~~l~~~a~~~~~~~~v~~~~r~~~~~~~~~~~~i~~g~i  140 (164)
T d1tlta1          68 HSSTASHFDVVSTLLNAGVH-VCVDKPLAENLRDAERLVELAARKKLTLMVGFNRRFFVGCARHFIECVQNQTV  140 (164)
T ss_dssp             CSCTTHHHHHHHHHHHTTCE-EEEESSSCSSHHHHHHHHHHHHHTTCCEEEECGGGGHHHHHHHHHHHHHHTCC
T ss_pred             cccchhccccccccccccce-eeccccccCCHHHHHHHHHHHHHcCCcEEEEeccccCHHHHHHHHHHHHCCCC
Confidence            99888888888888888755 4454332211111111    22233333 232221  2334567788888888

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=87.11  E-value=0.6  Score=34.56  Aligned_cols=41  Identities=22%  Similarity=0.186  Sum_probs=33.4

Q ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHH
Q 018075          176 VGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRL  216 (361)
Q Consensus       176 ~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~  216 (361)
                      .++..+|.|+|+|.+|...+.++...+...++..|.++++.
T Consensus         4 ~~k~~KI~IIGaG~VG~~lA~~l~~~~~~el~L~D~~~~~~   44 (154)
T d1pzga1           4 VQRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMP   44 (154)
T ss_dssp             CSCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHH
T ss_pred             ccCCCcEEEECCCHHHHHHHHHHHhCCCceEEEEEeccccc
Confidence            35678999999999999988888888866788888777653

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=87.03  E-value=0.62  Score=32.68  Aligned_cols=36  Identities=19%  Similarity=0.243  Sum_probs=29.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  213 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~  213 (361)
                      +..++++|+|+|.+|+=+++.++.+|.+ |..+...+
T Consensus        20 ~~p~~i~IiG~G~ig~E~A~~l~~~G~~-Vtiv~~~~   55 (119)
T d3lada2          20 NVPGKLGVIGAGVIGLELGSVWARLGAE-VTVLEAMD   55 (119)
T ss_dssp             SCCSEEEEECCSHHHHHHHHHHHHTTCE-EEEEESSS
T ss_pred             cCCCeEEEECCChHHHHHHHHHHHcCCc-eEEEEeec
Confidence            3458999999999999999999999995 55554443

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.01  E-value=1.8  Score=32.34  Aligned_cols=85  Identities=15%  Similarity=0.121  Sum_probs=56.7

Q ss_pred             HHHHHhcCC-CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHH
Q 018075          168 VHACRRANV-GPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       168 ~~~l~~~~~-~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~  245 (361)
                      +..+++.++ -.|.+|+|+| +.-+|.-+..++...|+ .|..+.......                     .    +. 
T Consensus        27 i~lL~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~ga-tVt~~~~~t~~l---------------------~----~~-   79 (170)
T d1a4ia1          27 LELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNA-TVTTCHSKTAHL---------------------D----EE-   79 (170)
T ss_dssp             HHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTCSSH---------------------H----HH-
T ss_pred             HHHHHHhCcccccceEEEEecCCccchHHHHHHHhccC-ceEEEecccccH---------------------H----HH-
Confidence            445566444 4899999999 67899999999999999 566654322111                     1    11 


Q ss_pred             hhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccC
Q 018075          246 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       246 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~  284 (361)
                         -+..|+++-++|.+..+.  -+.++++-.++.+|..
T Consensus        80 ---~~~aDivi~a~G~~~~i~--~~~vk~g~iviDvgi~  113 (170)
T d1a4ia1          80 ---VNKGDILVVATGQPEMVK--GEWIKPGAIVIDCGIN  113 (170)
T ss_dssp             ---HTTCSEEEECCCCTTCBC--GGGSCTTCEEEECCCB
T ss_pred             ---Hhhccchhhccccccccc--cccccCCCeEeccCcc
Confidence               135788888888763322  3467788877777754

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=86.85  E-value=3.9  Score=29.09  Aligned_cols=76  Identities=20%  Similarity=0.215  Sum_probs=43.4

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHc-CCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEc
Q 018075          181 NVMIMG-SGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  258 (361)
Q Consensus       181 ~vlI~G-~g~~G~~ai~la~~~-g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  258 (361)
                      +|.|.| .|-+|...++.+... +.+.+.+++..+ ....                         .   ...++|+++|.
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~-~~~~-------------------------~---~~~~~DvvIDF   51 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGD-PLSL-------------------------L---TDGNTEVVIDF   51 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTC-CTHH-------------------------H---HTTTCSEEEEC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC-chhh-------------------------h---ccccCCEEEEc
Confidence            688999 599999998876654 564333333211 1111                         1   13467788887


Q ss_pred             cCChHHHHHHHHhhcCCCEEEEEccCCC
Q 018075          259 VGFDKTMSTALNATRPGGKVCLIGLAKT  286 (361)
Q Consensus       259 ~g~~~~~~~~~~~l~~~G~~v~~g~~~~  286 (361)
                      +... .+...++.+...|.=+.+|.++-
T Consensus        52 S~p~-~~~~~~~~~~~~~~~~ViGTTG~   78 (135)
T d1yl7a1          52 THPD-VVMGNLEFLIDNGIHAVVGTTGF   78 (135)
T ss_dssp             CCTT-THHHHHHHHHHTTCEEEECCCCC
T ss_pred             ccHH-HHHHHHHHHHhcCCCEEEecccc
Confidence            7644 45555554444444455565553

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=86.84  E-value=4  Score=29.19  Aligned_cols=37  Identities=19%  Similarity=0.312  Sum_probs=30.1

Q ss_pred             EEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHHH
Q 018075          181 NVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRLS  217 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~~  217 (361)
                      +|.|+|+|.+|...+..+...+ ++.++-.|.++++.+
T Consensus         2 KI~IIGaG~VG~~la~~l~~~~l~~el~L~Di~~~~~~   39 (142)
T d1guza1           2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQ   39 (142)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHH
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCceEEEeccccccch
Confidence            5888999999999888888777 457888998887654

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.80  E-value=0.4  Score=39.93  Aligned_cols=35  Identities=26%  Similarity=0.480  Sum_probs=30.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  212 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~  212 (361)
                      ++..+|+|+|+|..|+.|+..++..|. .|.+.+.+
T Consensus         3 ~~~~kViVIGaG~aGL~aA~~L~~~G~-~V~VlEa~   37 (449)
T d2dw4a2           3 KKTGKVIIIGSGVSGLAAARQLQSFGM-DVTLLEAR   37 (449)
T ss_dssp             SCCCEEEEECCBHHHHHHHHHHHHTTC-EEEEECSS
T ss_pred             CCCCcEEEECCCHHHHHHHHHHHhCCC-CEEEEeCC
Confidence            566789999999999999999999999 67887654

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=86.72  E-value=0.64  Score=32.42  Aligned_cols=34  Identities=21%  Similarity=0.268  Sum_probs=29.1

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075          179 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  213 (361)
Q Consensus       179 g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~  213 (361)
                      .++++|+|+|.+|.=+++.++.+|. .|..+.+.+
T Consensus        21 p~~vvIiGgG~ig~E~A~~l~~~G~-~Vtlve~~~   54 (116)
T d1gesa2          21 PERVAVVGAGYIGVELGGVINGLGA-KTHLFEMFD   54 (116)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCEEEEECCChhhHHHHHHhhcccc-EEEEEeecc
Confidence            4789999999999999999999999 577776654

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=86.58  E-value=0.7  Score=33.13  Aligned_cols=38  Identities=18%  Similarity=0.337  Sum_probs=31.7

Q ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075          175 NVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  213 (361)
Q Consensus       175 ~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~  213 (361)
                      .++++.+++|+|+|.+|.=++..++..|. .|..++..+
T Consensus        31 ~~~~~k~v~VIGgG~iG~E~A~~l~~~g~-~Vtvie~~~   68 (133)
T d1q1ra2          31 QLIADNRLVVIGGGYIGLEVAATAIKANM-HVTLLDTAA   68 (133)
T ss_dssp             TCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             hhccCCEEEEECCchHHHHHHHHHHhhCc-ceeeeeecc
Confidence            35678999999999999999999999999 577776544

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=86.51  E-value=0.55  Score=37.35  Aligned_cols=35  Identities=31%  Similarity=0.451  Sum_probs=29.6

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  212 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~  212 (361)
                      +.-.+|+|+|+|..|++++..+...|. .|..+++.
T Consensus         4 ~~~~kVvVIGaGiaGl~~A~~L~~~G~-~V~vier~   38 (268)
T d1c0pa1           4 HSQKRVVVLGSGVIGLSSALILARKGY-SVHILARD   38 (268)
T ss_dssp             CCSCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred             CCCCcEEEECccHHHHHHHHHHHHCCC-CEEEEeCC
Confidence            445689999999999999999999999 67888753

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=86.24  E-value=0.63  Score=37.63  Aligned_cols=32  Identities=25%  Similarity=0.392  Sum_probs=27.3

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075          181 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDV  213 (361)
Q Consensus       181 ~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~  213 (361)
                      +|||.| +|-+|...+..++..|. .|+++++++
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~-~Vi~~~r~~   35 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNV-EVIPTDVQD   35 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSE-EEEEECTTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCC-EEEEeechh
Confidence            689999 59999999999999998 688887653

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.24  E-value=0.69  Score=32.60  Aligned_cols=35  Identities=20%  Similarity=0.369  Sum_probs=29.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  213 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~  213 (361)
                      ..++++|+|+|.+|.=+++++..+|. .|..+...+
T Consensus        22 ~p~~~vIiG~G~ig~E~A~~l~~lG~-~Vtii~~~~   56 (122)
T d1v59a2          22 IPKRLTIIGGGIIGLEMGSVYSRLGS-KVTVVEFQP   56 (122)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCCeEEEECCCchHHHHHHHHHhhCc-ceeEEEecc
Confidence            34799999999999999999999999 566665543

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=86.23  E-value=4.4  Score=29.05  Aligned_cols=35  Identities=20%  Similarity=0.361  Sum_probs=26.4

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCC-CEEEEEeCChhH
Q 018075          181 NVMIMGSGPIGLVTLLAARAFGA-PRIIITDVDVQR  215 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~g~-~~vv~v~~~~~~  215 (361)
                      +|.|+|+|.+|...+..+...+. +.++.+|.++++
T Consensus         3 KI~IIGaG~VG~~~a~~l~~~~l~~el~L~D~~~~~   38 (142)
T d1y6ja1           3 KVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEK   38 (142)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---
T ss_pred             eEEEECCCHHHHHHHHHHHhcCCCCEEEEEeccCCc
Confidence            68889999999998887777764 468888877765

>d2b9ea1 c.66.1.38 (A:133-425) NOL1R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: NOL1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.16  E-value=1.6  Score=35.95  Aligned_cols=55  Identities=22%  Similarity=0.250  Sum_probs=36.0

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEeCChhHHHHH----HHcCCCEEee
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAF-GAPRIIITDVDVQRLSIA----RNLGADETAK  229 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~-g~~~vv~v~~~~~~~~~~----~~lg~~~~~~  229 (361)
                      ...++|++||=+.+++ |.=++++|..+ +-..+++++.+..|.+.+    +++|...+..
T Consensus        90 L~~~~g~~vLD~cAap-GgKt~~la~l~~~~~~i~a~d~~~~R~~~l~~~l~r~g~~~~~~  149 (293)
T d2b9ea1          90 LDPPPGSHVIDACAAP-GNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCEL  149 (293)
T ss_dssp             HCCCTTCEEEESSCTT-CHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEE
T ss_pred             cCCCccceEEecccch-hhHHHHHHHHhcCCceEeeecCCHHHHHHHHHHHHhcCccceee
Confidence            4679999988875444 33344555444 334799999999886554    5578766543

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=85.92  E-value=0.35  Score=37.81  Aligned_cols=30  Identities=30%  Similarity=0.538  Sum_probs=25.7

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075          182 VMIMGSGPIGLVTLLAARAFGAPRIIITDVD  212 (361)
Q Consensus       182 vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~  212 (361)
                      |+|+|+|+.|+.++..+...|. +|+.++..
T Consensus         6 vvVIGgGpaGl~aA~~aa~~G~-kV~vie~~   35 (221)
T d1dxla1           6 VVIIGGGPGGYVAAIKAAQLGF-KTTCIEKR   35 (221)
T ss_dssp             EEEECCSHHHHHHHHHHHHHTC-CEEEEECS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-cEEEEEec
Confidence            6788999999999999999999 57777654

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=85.91  E-value=0.56  Score=34.99  Aligned_cols=36  Identities=11%  Similarity=0.251  Sum_probs=28.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCC-EEEEEeCCh
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAP-RIIITDVDV  213 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~-~vv~v~~~~  213 (361)
                      .|.+|+|+|+|..|+.+++.++..+.+ .|+.++.++
T Consensus         1 ~gkrivIvGgG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            378999999999999999988888753 466666544

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=85.70  E-value=0.4  Score=38.13  Aligned_cols=35  Identities=23%  Similarity=0.462  Sum_probs=29.0

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhH
Q 018075          180 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQR  215 (361)
Q Consensus       180 ~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~  215 (361)
                      +++||.| ++++|.+.++.+...|+ .|+.+++++++
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~   37 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGY-RVVVLDLRREG   37 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCccc
Confidence            5678888 58999999999999999 68888877653

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=85.51  E-value=0.2  Score=38.56  Aligned_cols=34  Identities=21%  Similarity=0.350  Sum_probs=28.3

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  212 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~  212 (361)
                      ++..|+|+|+|+.|+.|+..+...|.+ ++.++..
T Consensus         4 k~~dVvIIGGGpaGl~AA~~~ar~g~~-v~iie~~   37 (190)
T d1trba1           4 KHSKLLILGSGPAGYTAAVYAARANLQ-PVLITGM   37 (190)
T ss_dssp             EEEEEEEECCSHHHHHHHHHHHTTTCC-CEEECCS
T ss_pred             CCCcEEEECCCHHHHHHHHHHHHcCCc-eEEEEee
Confidence            456899999999999999999999995 6666543

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=85.37  E-value=0.82  Score=38.18  Aligned_cols=32  Identities=16%  Similarity=-0.022  Sum_probs=27.4

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075          180 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVD  212 (361)
Q Consensus       180 ~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~  212 (361)
                      .++||.| +|-+|...+..+...|. .|+++++.
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~-~V~~~~r~   34 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGY-EVHGLIRR   34 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcC-EEEEEECC
Confidence            5789998 59999999999988999 68888764

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=85.35  E-value=0.41  Score=36.16  Aligned_cols=29  Identities=28%  Similarity=0.418  Sum_probs=25.2

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEeC
Q 018075          182 VMIMGSGPIGLVTLLAARAFGAPRIIITDV  211 (361)
Q Consensus       182 vlI~G~g~~G~~ai~la~~~g~~~vv~v~~  211 (361)
                      |+|+|+|+.|+.|+..+...|.+ +..++.
T Consensus         4 ViIIGgGpaGl~AAi~aar~G~~-v~iie~   32 (184)
T d1fl2a1           4 VLIVGSGPAGAAAAIYSARKGIR-TGLMGE   32 (184)
T ss_dssp             EEEECCSHHHHHHHHHHHTTTCC-EEEECS
T ss_pred             EEEECcCHHHHHHHHHHHHcCCe-EEEEEE
Confidence            78899999999999999999995 666754

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=85.23  E-value=0.93  Score=33.31  Aligned_cols=39  Identities=21%  Similarity=0.303  Sum_probs=32.8

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHH
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRL  216 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~  216 (361)
                      |..+|-|+|+|.+|...+.++...+...++..|.++++.
T Consensus         2 p~~KI~IIGaG~VG~~~a~~l~~~~l~el~L~Di~~~~~   40 (150)
T d1t2da1           2 PKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMP   40 (150)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHH
T ss_pred             CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEeccCCcc
Confidence            457899999999999998888888887888888777553

>d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=85.22  E-value=2.3  Score=36.38  Aligned_cols=56  Identities=20%  Similarity=0.151  Sum_probs=42.6

Q ss_pred             cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEe--CChhHHHHHHHcCCCEEee
Q 018075          174 ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITD--VDVQRLSIARNLGADETAK  229 (361)
Q Consensus       174 ~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~--~~~~~~~~~~~lg~~~~~~  229 (361)
                      .+++++++|+-..+|..|.+.+..|+.+|.+.++.+.  .++.|.+.++.+|+..+..
T Consensus       139 ~~~~~g~~VVeaSSGN~GiAlA~~aa~lGik~~Iv~P~~~~~~K~~~ira~GAeVi~~  196 (382)
T d1wkva1         139 RRVEKGSLVADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPRLLGAQVIVD  196 (382)
T ss_dssp             TTSCTTCEEEEECCHHHHHHHHHHHHHTTCEEEEEEETTSCHHHHHHHHHTTCEEEEE
T ss_pred             hccCCCCEEEEeCCcHHHHHHHHHHHHcCCCEEEEeeccccccccccccccCcceeec
Confidence            4577887755556799999999999999996555553  3557888899999876543

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=85.21  E-value=0.63  Score=32.83  Aligned_cols=34  Identities=9%  Similarity=0.109  Sum_probs=28.0

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  212 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~  212 (361)
                      ..++++|+|+|.+|+=.++.++.+|.+ |..+.++
T Consensus        19 ~P~~vvIIGgG~iG~E~A~~l~~lG~~-Vtii~~~   52 (122)
T d1h6va2          19 CPGKTLVVGASYVALECAGFLAGIGLD-VTVMVRS   52 (122)
T ss_dssp             CCCSEEEECCSHHHHHHHHHHHHTTCC-EEEEESS
T ss_pred             CCCeEEEECCCccHHHHHHHHhhcCCe-EEEEEec
Confidence            457899999999999999999999996 4445443

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=85.01  E-value=3.5  Score=30.66  Aligned_cols=101  Identities=16%  Similarity=0.196  Sum_probs=58.7

Q ss_pred             CEEEEECCCHHHHHHHHHHHHc---CCCEEEEEe-C-ChhHHHHHHHcCC-----CEEeecCC-------------Cccc
Q 018075          180 TNVMIMGSGPIGLVTLLAARAF---GAPRIIITD-V-DVQRLSIARNLGA-----DETAKVST-------------DIED  236 (361)
Q Consensus       180 ~~vlI~G~g~~G~~ai~la~~~---g~~~vv~v~-~-~~~~~~~~~~lg~-----~~~~~~~~-------------~~~~  236 (361)
                      .+|.|.|-|-+|..+...+...   .. .++++. . +.+...++-++-.     +.-+.+..             +..+
T Consensus         1 ~kIgINGfGRIGR~v~R~~~~~~~~~i-~vvaINd~~~~e~~ayLlkyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~~   79 (169)
T d1hdgo1           1 ARVAINGFGRIGRLVYRIIYERKNPDI-EVVAINDLTDTKTLAHLLKYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPD   79 (169)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHTCTTC-EEEEEECSSCHHHHHHHHHCCTTTCCCSSCEEECSSEEEETTEEEEEECCSS
T ss_pred             CEEEEECCChHHHHHHHHHHhccCCCE-EEEEeccCccHHHHHHHHhccccccccCceEEEECCEEEECCEEEEEEeCCC
Confidence            3789999999999998876543   35 455552 2 2344444444321     00000000             0011


Q ss_pred             hhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC
Q 018075          237 VDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT  286 (361)
Q Consensus       237 ~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  286 (361)
                      ..+    +.+ ...++|+||||+|.-...+.+..++..|.+-|.+..+..
T Consensus        80 p~~----i~W-~~~gvD~ViEcTG~f~t~~~~~~hl~~GakkViiSAP~k  124 (169)
T d1hdgo1          80 PSK----LPW-KDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPAK  124 (169)
T ss_dssp             GGG----SCH-HHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCB
T ss_pred             hhh----CCc-cccCCCEEEEecceeccccchhhhccCCCceEEEecccC
Confidence            111    111 123799999999986677888889998887777765543

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=84.92  E-value=0.42  Score=38.13  Aligned_cols=31  Identities=32%  Similarity=0.659  Sum_probs=26.3

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075          182 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  213 (361)
Q Consensus       182 vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~  213 (361)
                      |+|+|+|+.|++++..+...|. +|+.++..+
T Consensus         5 ViIIGaG~aGl~aA~~la~~G~-~V~liEk~~   35 (251)
T d2i0za1           5 VIVIGGGPSGLMAAIGAAEEGA-NVLLLDKGN   35 (251)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence            7889999999988888888999 588887654

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=84.91  E-value=5.2  Score=28.66  Aligned_cols=36  Identities=14%  Similarity=0.225  Sum_probs=29.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHcC-CCEEEEEeCChhHH
Q 018075          181 NVMIMGSGPIGLVTLLAARAFG-APRIIITDVDVQRL  216 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~g-~~~vv~v~~~~~~~  216 (361)
                      +|.|+|+|.+|...+..+...+ ++.++.+|.++++.
T Consensus         2 KI~IIGaG~VG~~~a~~l~~~~~~~elvL~Di~~~~~   38 (142)
T d1ojua1           2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLA   38 (142)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHH
T ss_pred             EEEEECcCHHHHHHHHHHHhcCcCceEEEEecccchh
Confidence            6788999999998888777666 45688899888764

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=84.88  E-value=1.8  Score=36.17  Aligned_cols=36  Identities=17%  Similarity=0.300  Sum_probs=28.8

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChh
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQ  214 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~  214 (361)
                      +-.+|||.| +|-+|...+..+...|.+ |+++.++.+
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~-V~~l~R~~~   38 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHH-VRAQVHSLK   38 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCC-EEEEESCSC
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCe-EEEEECCcc
Confidence            457899998 699999999998889995 666656544

>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Galactose/lactose metabolism regulatory protein GAL80
species: Yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=84.87  E-value=1.9  Score=34.17  Aligned_cols=96  Identities=10%  Similarity=0.087  Sum_probs=58.6

Q ss_pred             CEEEEECCCH----HHHHHHHHHHHc--CCCEEEEEeCChhHH-HHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCc
Q 018075          180 TNVMIMGSGP----IGLVTLLAARAF--GAPRIIITDVDVQRL-SIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       180 ~~vlI~G~g~----~G~~ai~la~~~--g~~~vv~v~~~~~~~-~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      =+|.|+|+|.    ++..-+...+..  +++.+...+.+.++. +++++++......|+    ++.+.+    .  ...+
T Consensus        17 irvgiIG~G~~~~~~~~~h~~ai~~~~~~~~ivav~d~~~~~~~~~~~~~~~~~~~~~~----~~~~l~----~--~~~i   86 (237)
T d2nvwa1          17 IRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFD----SLESFA----Q--YKDI   86 (237)
T ss_dssp             EEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEES----CHHHHH----H--CTTC
T ss_pred             eEEEEEecCccccHHHHHHHHHHHhcCCCeEEEEEEcCCHHHHHHHHHhcccccceeec----chhhcc----c--cccc
Confidence            4788999765    333333333433  464444556766654 466778765433332    333322    1  4679


Q ss_pred             cEEEEccCChHHHHHHHHhhcCC-----CEEEEEccCC
Q 018075          253 DVSFDCVGFDKTMSTALNATRPG-----GKVCLIGLAK  285 (361)
Q Consensus       253 d~vld~~g~~~~~~~~~~~l~~~-----G~~v~~g~~~  285 (361)
                      |+|+.++....+.+.+..+|..|     ++=++++-+.
T Consensus        87 D~V~i~tp~~~h~~~~~~al~aG~~~~~~k~V~~EKPl  124 (237)
T d2nvwa1          87 DMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEWAL  124 (237)
T ss_dssp             SEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEESSS
T ss_pred             ceeeccCCCcchhhHHHHHHHhcccccCCceEEEeccc
Confidence            99999999887888888888754     4567776443

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=84.83  E-value=1.4  Score=33.45  Aligned_cols=98  Identities=10%  Similarity=0.063  Sum_probs=59.5

Q ss_pred             CCCCCCEEEEE--CCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCE-EeecCCCccchhHHHHHHHhh
Q 018075          175 NVGPETNVMIM--GSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADE-TAKVSTDIEDVDTDVGKIQNA  247 (361)
Q Consensus       175 ~~~~g~~vlI~--G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~-~~~~~~~~~~~~~~~~~~~~~  247 (361)
                      ...+|.+||=.  |+|.+|+-|+    ..|+..|+.++.+.+..+.+++    ++... +...   ..+..+.++++.. 
T Consensus        38 ~~~~~~~vLDlfaGsG~~g~ea~----srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~---~~D~~~~l~~~~~-  109 (182)
T d2fhpa1          38 PYFDGGMALDLYSGSGGLAIEAV----SRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVR---KMDANRALEQFYE-  109 (182)
T ss_dssp             SCCSSCEEEETTCTTCHHHHHHH----HTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEE---ESCHHHHHHHHHH-
T ss_pred             HhcCCCEEEEcccccccccceee----ecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccc---cccchhhhhhhcc-
Confidence            34578888876  4677776433    3889899999999988877654    45432 2111   1355555554432 


Q ss_pred             cCCCccEEEEccC--C---hHHHHHHHH--hhcCCCEEEE
Q 018075          248 MGSGIDVSFDCVG--F---DKTMSTALN--ATRPGGKVCL  280 (361)
Q Consensus       248 ~~~~~d~vld~~g--~---~~~~~~~~~--~l~~~G~~v~  280 (361)
                      .+.+||+||-.-+  .   ...++.+.+  .|.++|.+++
T Consensus       110 ~~~~fDlIflDPPY~~~~~~~~l~~i~~~~~L~~~giIi~  149 (182)
T d2fhpa1         110 EKLQFDLVLLDPPYAKQEIVSQLEKMLERQLLTNEAVIVC  149 (182)
T ss_dssp             TTCCEEEEEECCCGGGCCHHHHHHHHHHTTCEEEEEEEEE
T ss_pred             cCCCcceEEechhhhhhHHHHHHHHHHHCCCCCCCEEEEE
Confidence            2468999986432  1   124444443  3788886653

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=84.68  E-value=0.75  Score=32.62  Aligned_cols=36  Identities=22%  Similarity=0.356  Sum_probs=29.8

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  213 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~  213 (361)
                      +..++++|+|+|.+|+=+++..+.+|. .|..+...+
T Consensus        24 ~~p~~vvIiGgG~IG~E~A~~~~~~G~-~Vtive~~~   59 (125)
T d1ojta2          24 EVPGKLLIIGGGIIGLEMGTVYSTLGS-RLDVVEMMD   59 (125)
T ss_dssp             CCCSEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             ccCCeEEEECCCHHHHHHHHHhhcCCC-EEEEEEeec
Confidence            446899999999999999999999999 566665543

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=84.68  E-value=0.44  Score=38.33  Aligned_cols=33  Identities=21%  Similarity=0.412  Sum_probs=27.8

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChh
Q 018075          181 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQ  214 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~  214 (361)
                      -|+|+|+|+.|++++..+...|. .|..++..+.
T Consensus         6 DViIIGaG~aGl~aA~~la~~G~-~V~vlEk~~~   38 (253)
T d2gqfa1           6 ENIIIGAGAAGLFCAAQLAKLGK-SVTVFDNGKK   38 (253)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred             cEEEECcCHHHHHHHHHHHHCCC-cEEEEecCCC
Confidence            47899999999999988888998 5888877653

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=84.56  E-value=0.84  Score=33.66  Aligned_cols=36  Identities=19%  Similarity=0.296  Sum_probs=29.9

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  212 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~  212 (361)
                      .-+++|+|+|+|.+|.=++..+...|+..|..+.+.
T Consensus        43 ~~~~kVvVIGGGdtA~D~A~~a~r~GA~~V~vi~rr   78 (153)
T d1gtea3          43 SIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRK   78 (153)
T ss_dssp             CCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSS
T ss_pred             cCCCEEEEECCChhHHHHHHHHHHcCCcceeEEEeC
Confidence            346789999999999999999889999877777543

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=84.52  E-value=1.5  Score=36.93  Aligned_cols=33  Identities=15%  Similarity=0.032  Sum_probs=26.4

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075          180 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDV  213 (361)
Q Consensus       180 ~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~  213 (361)
                      ..|||.| +|-+|...+..+...|. .|+++++..
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~-~V~~~~r~~   35 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGY-EVHGIKRRA   35 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC--
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-EEEEEECCC
Confidence            5688998 69999999998888898 688887743

>d1xdza_ c.66.1.20 (A:) Glucose-inhibited division protein B (GidB) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glucose-inhibited division protein B (GidB)
domain: Glucose-inhibited division protein B (GidB)
species: Bacillus subtilis [TaxId: 1423]

Probab=84.51  E-value=0.61  Score=37.27  Aligned_cols=100  Identities=15%  Similarity=0.174  Sum_probs=62.4

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhhcCCCc
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      ..+.+++=+|+|+ |.-.+-+|-...-..+..++++..|..+++.    +|...+..+....+++..    . ......|
T Consensus        69 ~~~~~ilDiGSGa-GfPGi~laI~~p~~~v~Lves~~KK~~FL~~v~~~L~L~n~~i~~~R~E~~~~----~-~~~~~~~  142 (239)
T d1xdza_          69 NQVNTICDVGAGA-GFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQ----R-KDVRESY  142 (239)
T ss_dssp             GGCCEEEEECSSS-CTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTT----C-TTTTTCE
T ss_pred             cCCCeEEeecCCC-chHHHHHHHhCCCccceeecchHHHHHHHHHHHHHhCCCCcEEEeehhhhccc----c-ccccccc
Confidence            3567787788654 5555556655654479999999999887654    676655443332221110    0 0113578


Q ss_pred             cEEEE-ccCCh-HHHHHHHHhhcCCCEEEEEc
Q 018075          253 DVSFD-CVGFD-KTMSTALNATRPGGKVCLIG  282 (361)
Q Consensus       253 d~vld-~~g~~-~~~~~~~~~l~~~G~~v~~g  282 (361)
                      |+|.. +++.. ..++.+...++++|+++.+=
T Consensus       143 D~v~sRAva~l~~ll~~~~~~l~~~g~~i~~K  174 (239)
T d1xdza_         143 DIVTARAVARLSVLSELCLPLVKKNGLFVALK  174 (239)
T ss_dssp             EEEEEECCSCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             eEEEEhhhhCHHHHHHHHhhhcccCCEEEEEC
Confidence            99987 44433 35666777889999998873

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=84.43  E-value=0.46  Score=37.05  Aligned_cols=30  Identities=17%  Similarity=0.464  Sum_probs=26.1

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075          182 VMIMGSGPIGLVTLLAARAFGAPRIIITDVD  212 (361)
Q Consensus       182 vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~  212 (361)
                      |+|+|+|+.|+.++..|..+|. +|..++..
T Consensus         5 vvVIG~G~aG~~aA~~a~~~G~-kV~iiE~~   34 (217)
T d1gesa1           5 YIAIGGGSGGIASINRAAMYGQ-KCALIEAK   34 (217)
T ss_dssp             EEEECCSHHHHHHHHHHHTTTC-CEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-EEEEEecc
Confidence            6888999999999999999999 57777754

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=84.34  E-value=0.78  Score=31.85  Aligned_cols=34  Identities=26%  Similarity=0.502  Sum_probs=28.6

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075          179 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  213 (361)
Q Consensus       179 g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~  213 (361)
                      .++++|+|+|.+|.=+++.++.+|. .|..+.+.+
T Consensus        21 p~~vvIiGgG~~G~E~A~~l~~~g~-~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVGGGYIGLELGIAYRKLGA-QVSVVEARE   54 (115)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             CCeEEEECCCHHHHHHHHHHhhccc-ceEEEeeec
Confidence            4899999999999999999999999 566665543

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.26  E-value=1.9  Score=36.13  Aligned_cols=31  Identities=26%  Similarity=0.382  Sum_probs=25.1

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeC
Q 018075          180 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDV  211 (361)
Q Consensus       180 ~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~  211 (361)
                      +.|||.| +|-+|...+..+...|. .|++++.
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~-~V~~~d~   33 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGY-DCVVADN   33 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcC-eEEEEEC
Confidence            4688998 69999999998888898 5777753

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=84.14  E-value=1.3  Score=35.84  Aligned_cols=33  Identities=21%  Similarity=0.433  Sum_probs=27.1

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075          180 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDV  213 (361)
Q Consensus       180 ~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~  213 (361)
                      .+|||.| +|-+|...+..+...|.+ |++++++.
T Consensus         4 kKILVtGatG~iG~~l~~~L~~~G~~-V~~l~R~~   37 (307)
T d1qyca_           4 SRILLIGATGYIGRHVAKASLDLGHP-TFLLVRES   37 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCC-EEEECCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCe-EEEEECCC
Confidence            6899999 599999999999889984 67766543

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=84.06  E-value=1  Score=37.62  Aligned_cols=74  Identities=18%  Similarity=0.033  Sum_probs=43.0

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc-CCCEEeecCCCccchhHHHHHHHhhcCCCccEEEEc
Q 018075          181 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL-GADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFDC  258 (361)
Q Consensus       181 ~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld~  258 (361)
                      +|||.| +|-+|...++.+...|-..|++++....+...+.+. ++.. +..+  -.+..+..+...    .++|.|+.+
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~-i~~D--i~~~~~~~~~~~----~~~d~Vih~   74 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHF-VEGD--ISIHSEWIEYHV----KKCDVVLPL   74 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEE-EECC--TTTCSHHHHHHH----HHCSEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEE-EECc--cCChHHHHHHHH----hCCCccccc
Confidence            699998 699999999877777844688887765543332221 1222 2211  111112222121    369999997


Q ss_pred             cCC
Q 018075          259 VGF  261 (361)
Q Consensus       259 ~g~  261 (361)
                      .+.
T Consensus        75 a~~   77 (342)
T d2blla1          75 VAI   77 (342)
T ss_dssp             BCC
T ss_pred             ccc
Confidence            764

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.90  E-value=1  Score=31.79  Aligned_cols=34  Identities=18%  Similarity=0.182  Sum_probs=28.9

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075          179 ETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  213 (361)
Q Consensus       179 g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~  213 (361)
                      .++++|+|+|.+|+=+++.++.+|. .|..+.+++
T Consensus        22 pk~vvIvGgG~iG~E~A~~l~~~G~-~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGAGYIAVEMAGILSALGS-KTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred             CCEEEEEcCCccHHHHHHHHhcCCc-EEEEEeecc
Confidence            3799999999999999999999999 567776643

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=83.85  E-value=1.2  Score=37.21  Aligned_cols=98  Identities=16%  Similarity=0.157  Sum_probs=61.8

Q ss_pred             HhcCCCCCCEEEEECCCHHHHHHHHH-HHHcCCCEEEEEeCChhHHHHH----HHcCCCEEeecCCCccchhHHHHHHHh
Q 018075          172 RRANVGPETNVMIMGSGPIGLVTLLA-ARAFGAPRIIITDVDVQRLSIA----RNLGADETAKVSTDIEDVDTDVGKIQN  246 (361)
Q Consensus       172 ~~~~~~~g~~vlI~G~g~~G~~ai~l-a~~~g~~~vv~v~~~~~~~~~~----~~lg~~~~~~~~~~~~~~~~~~~~~~~  246 (361)
                      +...-+...++.|+|+|..+..-+.. +.....+.|.+.++++++.+..    +..+.....       +..+.+     
T Consensus       118 ~~la~~~~~~l~iiGaG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~-------~~~~a~-----  185 (320)
T d1omoa_         118 KYLARKNSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASV-------QPAEEA-----  185 (320)
T ss_dssp             HHHSCTTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEE-------CCHHHH-----
T ss_pred             HHhccCCccEEEEecCcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCcccc-------chhhhh-----
Confidence            33333455788889999888766664 4456788899998888876433    223333211       111221     


Q ss_pred             hcCCCccEEEEccCChH-HHHHHHHhhcCCCEEEEEccCCC
Q 018075          247 AMGSGIDVSFDCVGFDK-TMSTALNATRPGGKVCLIGLAKT  286 (361)
Q Consensus       247 ~~~~~~d~vld~~g~~~-~~~~~~~~l~~~G~~v~~g~~~~  286 (361)
                         .+.|+|+-+..+.. .+.  .+.+++|-++..+|....
T Consensus       186 ---~~aDiV~taT~s~~P~~~--~~~l~~G~hv~~iGs~~p  221 (320)
T d1omoa_         186 ---SRCDVLVTTTPSRKPVVK--AEWVEEGTHINAIGADGP  221 (320)
T ss_dssp             ---TSSSEEEECCCCSSCCBC--GGGCCTTCEEEECSCCST
T ss_pred             ---ccccEEEEeccCcccccc--hhhcCCCCeEeecCCccc
Confidence               46999999877542 111  246899999999986543

>d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Escherichia coli [TaxId: 562]

Probab=83.69  E-value=4.9  Score=27.74  Aligned_cols=90  Identities=21%  Similarity=0.186  Sum_probs=59.4

Q ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccE
Q 018075          176 VGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV  254 (361)
Q Consensus       176 ~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  254 (361)
                      +.+..+|||+| +|.-|..-.+..+..|-+.|.+++..+.-.+.   +| -+  .|+    ...+++++      .++|.
T Consensus         3 i~k~trVlvQGiTG~~G~~ht~~m~~yGT~vVaGVtPgkgG~~~---~g-iP--Vf~----sV~eAv~~------~~~~~   66 (119)
T d2nu7a1           3 IDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTH---LG-LP--VFN----TVREAVAA------TGATA   66 (119)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTEEE---TT-EE--EES----SHHHHHHH------HCCCE
T ss_pred             ecCCCcEEEEcCCCcHHHHHHHHHHHhCCceEEEEccCCCCccc---CC-Cc--hhh----HHHHHHHH------hCCCe
Confidence            46788999999 79999999999999999666666554432211   22 12  222    33344433      24677


Q ss_pred             EEEccCChHHHHHHHHhhcCCCEEEEE
Q 018075          255 SFDCVGFDKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       255 vld~~g~~~~~~~~~~~l~~~G~~v~~  281 (361)
                      -+-.+..+...+.+++.+..+=+++.+
T Consensus        67 SvIfVPp~~a~dA~~EAi~agI~~iV~   93 (119)
T d2nu7a1          67 SVIYVPAPFCKDSILEAIDAGIKLIIT   93 (119)
T ss_dssp             EEECCCGGGHHHHHHHHHHTTCSEEEE
T ss_pred             EEEeccHHHHHHHHHHHHHCCCCEEEE
Confidence            777777676777788888777666554

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=83.65  E-value=0.55  Score=36.94  Aligned_cols=31  Identities=16%  Similarity=0.241  Sum_probs=26.9

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075          182 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  213 (361)
Q Consensus       182 vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~  213 (361)
                      |+|+|+|..|+.++..+...|. +|.+++.++
T Consensus         8 viViGaG~~Gl~~A~~La~~G~-~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGTGITECILSGLLSVDGK-KVLHIDKQD   38 (297)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-CEEEEcCCC
Confidence            7888999999999998888998 688888764

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=83.64  E-value=2  Score=31.91  Aligned_cols=85  Identities=19%  Similarity=0.187  Sum_probs=57.3

Q ss_pred             HHHHHhcC-CCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHH
Q 018075          168 VHACRRAN-VGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQ  245 (361)
Q Consensus       168 ~~~l~~~~-~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~  245 (361)
                      +..++..+ --.|.+++|+| +..+|.-+..++...|+ .|..+.+..                     .+..+..    
T Consensus        25 ~~lL~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~ga-tVt~~h~~t---------------------~~l~~~~----   78 (166)
T d1b0aa1          25 VTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGC-TTTVTHRFT---------------------KNLRHHV----   78 (166)
T ss_dssp             HHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTC-EEEEECSSC---------------------SCHHHHH----
T ss_pred             HHHHHHcCcccccceEEEEeccccccHHHHHHHHHhhc-ccccccccc---------------------chhHHHH----
Confidence            34455544 35799999999 67899999999999999 465553322                     1111111    


Q ss_pred             hhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccC
Q 018075          246 NAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       246 ~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~  284 (361)
                          ...|+++.++|.+..+.  -+.++++..++.+|..
T Consensus        79 ----~~ADivI~a~G~p~~i~--~~~vk~g~vvIDvGi~  111 (166)
T d1b0aa1          79 ----ENADLLIVAVGKPGFIP--GDWIKEGAIVIDVGIN  111 (166)
T ss_dssp             ----HHCSEEEECSCCTTCBC--TTTSCTTCEEEECCCE
T ss_pred             ----hhhhHhhhhccCccccc--ccccCCCcEEEecCce
Confidence                35889999988774332  3466788888888754

>d1oi7a1 c.2.1.8 (A:1-121) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Thermus thermophilus [TaxId: 274]

Probab=83.35  E-value=5.4  Score=27.63  Aligned_cols=90  Identities=21%  Similarity=0.279  Sum_probs=61.9

Q ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccE
Q 018075          176 VGPETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDV  254 (361)
Q Consensus       176 ~~~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  254 (361)
                      +.++.+|+|.| +|.-|..-.+.++..|-+.|.+++..+.-.+.   .|   +-.|+    ...+++++      .++|.
T Consensus         4 i~k~trVivQGiTG~~G~~ht~~m~~yGT~iVaGVtPgkgG~~~---~g---iPVf~----tV~eAv~~------~~~d~   67 (121)
T d1oi7a1           4 VNRETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGGMEV---LG---VPVYD----TVKEAVAH------HEVDA   67 (121)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEE---TT---EEEES----SHHHHHHH------SCCSE
T ss_pred             ecCCCcEEEEcCCCcHHHHHHHHHHHhCCceEeeeecCCCCcEE---EC---CchHh----hHHHHHHh------cCCeE
Confidence            46778999999 89999999999999998666666554432211   12   22222    33344332      36888


Q ss_pred             EEEccCChHHHHHHHHhhcCCCEEEEE
Q 018075          255 SFDCVGFDKTMSTALNATRPGGKVCLI  281 (361)
Q Consensus       255 vld~~g~~~~~~~~~~~l~~~G~~v~~  281 (361)
                      -+-.++.+...+.+++.+..+=+++.+
T Consensus        68 SvIfVPp~~a~dAi~EAi~agI~liv~   94 (121)
T d1oi7a1          68 SIIFVPAPAAADAALEAAHAGIPLIVL   94 (121)
T ss_dssp             EEECCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred             EEEeeCHHHHHHHHHHHHhCCCcEEEE
Confidence            888888777788888888888777655

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=83.22  E-value=0.62  Score=36.25  Aligned_cols=30  Identities=27%  Similarity=0.631  Sum_probs=25.6

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075          182 VMIMGSGPIGLVTLLAARAFGAPRIIITDVD  212 (361)
Q Consensus       182 vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~  212 (361)
                      |+|+|+|+.|+.++..|...|. +|+.++..
T Consensus         6 viVIG~GpaGl~aA~~aar~G~-kV~vIEk~   35 (223)
T d1ebda1           6 TLVVGAGPGGYVAAIRAAQLGQ-KVTIVEKG   35 (223)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-EEEEEecC
Confidence            6778999999999999999999 57777654

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=83.08  E-value=0.89  Score=38.50  Aligned_cols=35  Identities=20%  Similarity=0.193  Sum_probs=29.0

Q ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075          178 PETNVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDV  213 (361)
Q Consensus       178 ~g~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~  213 (361)
                      ++-+|||.| +|-+|...+..+...|. .|+++++..
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~-~V~~~d~~~   49 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGH-YVIASDWKK   49 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCC
Confidence            577999998 69999999999988998 577776543

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=82.97  E-value=0.6  Score=38.74  Aligned_cols=32  Identities=25%  Similarity=0.519  Sum_probs=27.4

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075          181 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  213 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~  213 (361)
                      .|+|+|||..|++++..++..|.+ +++.+..+
T Consensus         9 dV~IIGAG~sGl~~a~~L~~~G~~-v~i~Ek~~   40 (298)
T d1w4xa1           9 DVLVVGAGFSGLYALYRLRELGRS-VHVIETAG   40 (298)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCC-EEEECSSS
T ss_pred             CEEEECccHHHHHHHHHHHhCCCC-EEEEEcCC
Confidence            578899999999999999999995 77787654

>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Escherichia coli [TaxId: 562]

Probab=82.97  E-value=6.8  Score=32.35  Aligned_cols=116  Identities=12%  Similarity=0.116  Sum_probs=69.3

Q ss_pred             HHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEe--CChhHHHHHHHcCCCEEeecC------------
Q 018075          167 GVHACRR-ANVGPETNVMIMGSGPIGLVTLLAARAFGAPRIIITD--VDVQRLSIARNLGADETAKVS------------  231 (361)
Q Consensus       167 a~~~l~~-~~~~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~--~~~~~~~~~~~lg~~~~~~~~------------  231 (361)
                      |+..+.. ..-.+...|+...+|..|.+++..++..|...++.+.  .+.++.+.++.+|++.+..-.            
T Consensus        62 a~~~i~~~~~~~~~~~vv~assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~~~Ga~vi~~~~~~~~~~~~~~~~  141 (331)
T d1tdja1          62 AYAMMAGLTEEQKAHGVITASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRGFGGEVLLHGANFDEAKAKAIEL  141 (331)
T ss_dssp             HHHHHHTTTTSSCSSSCEEEECSSSHHHHHHHHHHTTCCEEEECCSSCCHHHHHHHHHHSCEEECCCSSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCeeeecccchhHHHHHHhhccccccceeeccccchhHHHHHHHhcCCEEEEcCcccccchhhhhhh
Confidence            3444544 2223445555556788899999999999997655553  345678888889887543210            


Q ss_pred             ---------CCccc------hhHHHHHHHhhcCCCccEEEEccCChHHHHH---HHHhhcCCCEEEEEcc
Q 018075          232 ---------TDIED------VDTDVGKIQNAMGSGIDVSFDCVGFDKTMST---ALNATRPGGKVCLIGL  283 (361)
Q Consensus       232 ---------~~~~~------~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~---~~~~l~~~G~~v~~g~  283 (361)
                               ....+      ......++.++ ...+|.++-++|+..++.-   .++.+.+..+++.+..
T Consensus       142 ~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q-~~~~D~vv~~~G~GG~~aG~~~~~~~~~~~~~ii~ve~  210 (331)
T d1tdja1         142 SQQQGFTWVPPFDHPMVIAGQGTLALELLQQ-DAHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEA  210 (331)
T ss_dssp             HHHHCCEECCSSCCHHHHHHHHHHHHHHHHH-CTTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred             hhcCCCccccccCChHHhhhhhhHHHHHHHh-cCCCCEEEEeCChhHHHHHHHHHHHHhCCCcEEEEecc
Confidence                     00000      01111122222 2359999999988755443   4455678888888754

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=82.83  E-value=0.74  Score=32.47  Aligned_cols=36  Identities=17%  Similarity=0.315  Sum_probs=30.5

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  213 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~  213 (361)
                      +..++++|+|+|.+|+=+++..+.+|. .|..+.+++
T Consensus        23 ~~p~~~viiG~G~iglE~A~~~~~~G~-~Vtvi~~~~   58 (123)
T d1dxla2          23 EIPKKLVVIGAGYIGLEMGSVWGRIGS-EVTVVEFAS   58 (123)
T ss_dssp             SCCSEEEESCCSHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred             ccCCeEEEEccchHHHHHHHHHHhcCC-eEEEEEEcc
Confidence            345899999999999999999999999 577776654

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=82.80  E-value=1  Score=34.76  Aligned_cols=41  Identities=24%  Similarity=0.332  Sum_probs=35.2

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHc
Q 018075          181 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNL  222 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~l  222 (361)
                      +|.|+|.|-+|+..+..+...|. .|++.|.++++.+.+.+-
T Consensus         2 kI~ViGlG~vGl~~a~~la~~g~-~V~g~D~n~~~i~~ln~g   42 (202)
T d1mv8a2           2 RISIFGLGYVGAVCAGCLSARGH-EVIGVDVSSTKIDLINQG   42 (202)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTT
T ss_pred             EEEEECCCHhHHHHHHHHHhCCC-cEEEEeCCHHHHHHhccc
Confidence            57899999999988888888898 699999999988877653

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=82.77  E-value=0.67  Score=36.49  Aligned_cols=31  Identities=29%  Similarity=0.487  Sum_probs=26.4

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEeCCh
Q 018075          182 VMIMGSGPIGLVTLLAARAFGAPRIIITDVDV  213 (361)
Q Consensus       182 vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~  213 (361)
                      |+|+|+|+.|+.++..+...|. +|+.++..+
T Consensus         9 viIIG~GPaGlsaA~~aa~~G~-~V~viE~~~   39 (229)
T d1ojta1           9 VVVLGGGPGGYSAAFAAADEGL-KVAIVERYK   39 (229)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-eEEEEeccC
Confidence            6788999999999999999999 577786543

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=82.75  E-value=0.82  Score=37.56  Aligned_cols=36  Identities=19%  Similarity=0.179  Sum_probs=29.4

Q ss_pred             CCCEEEEECC-C--HHHHHHHHHHHHcCCCEEEEEeCChh
Q 018075          178 PETNVMIMGS-G--PIGLVTLLAARAFGAPRIIITDVDVQ  214 (361)
Q Consensus       178 ~g~~vlI~G~-g--~~G~~ai~la~~~g~~~vv~v~~~~~  214 (361)
                      +|+++||.|+ |  ++|.+.++.+...|+ .|+...+++.
T Consensus         7 ~gK~alVTGass~~GIG~aiA~~la~~Ga-~Vvi~~~~~~   45 (297)
T d1d7oa_           7 RGKRAFIAGIADDNGYGWAVAKSLAAAGA-EILVGTWVPA   45 (297)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEEEHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCchh
Confidence            6889999995 4  899999999999999 5666666544

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=82.72  E-value=0.62  Score=36.52  Aligned_cols=30  Identities=30%  Similarity=0.557  Sum_probs=25.0

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075          182 VMIMGSGPIGLVTLLAARAFGAPRIIITDVD  212 (361)
Q Consensus       182 vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~  212 (361)
                      |+|+|+|+.|+.|+..|...|. +|+.++..
T Consensus         8 viVIG~GpAGl~aA~~aa~~G~-kV~lie~~   37 (233)
T d1v59a1           8 VVIIGGGPAGYVAAIKAAQLGF-NTACVEKR   37 (233)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-cEEEEEec
Confidence            6788999999999888888999 56777654

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=82.61  E-value=2.7  Score=29.62  Aligned_cols=61  Identities=16%  Similarity=0.311  Sum_probs=47.8

Q ss_pred             HHHHhcCCCCCCEEEEE-CCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEee
Q 018075          169 HACRRANVGPETNVMIM-GSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAK  229 (361)
Q Consensus       169 ~~l~~~~~~~g~~vlI~-G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~  229 (361)
                      ..++.+++..-+.+++. ..-..-..+++++|..|..++++...+.+..+.++++|++.++.
T Consensus        56 ~~l~~~~i~~a~~vv~~t~~d~~N~~~~~~~k~~~~~~iI~~~~~~~~~~~l~~~G~d~vi~  117 (132)
T d1lssa_          56 KTLEDAGIEDADMYIAVTGKEEVNLMSSLLAKSYGINKTIARISEIEYKDVFERLGVDVVVS  117 (132)
T ss_dssp             HHHHHTTTTTCSEEEECCSCHHHHHHHHHHHHHTTCCCEEEECSSTTHHHHHHHTTCSEEEC
T ss_pred             hhhhhcChhhhhhhcccCCcHHHHHHHHHHHHHcCCceEEEEecCHHHHHHHHHCCCCEEEC
Confidence            35667778777766664 34456678888999999888888888888899999999998764

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=82.54  E-value=0.58  Score=36.59  Aligned_cols=31  Identities=26%  Similarity=0.577  Sum_probs=26.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075          181 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  212 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~  212 (361)
                      -++|+|+|+.|+.++..|..+|. +|..++..
T Consensus         7 DlvVIG~GpaGl~aA~~aa~~G~-~V~liE~~   37 (220)
T d1lvla1           7 TLLIIGGGPGGYVAAIRAGQLGI-PTVLVEGQ   37 (220)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTC-CEEEECSS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCC-cEEEEecC
Confidence            46788999999999999999999 57777654

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=82.53  E-value=0.96  Score=33.87  Aligned_cols=28  Identities=32%  Similarity=0.472  Sum_probs=25.2

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPR  205 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~  205 (361)
                      .+++|+|+|+|.+|.-++..++.+|.+.
T Consensus         2 ~~~~VvIIGgG~~G~e~A~~l~~~g~~v   29 (185)
T d1q1ra1           2 ANDNVVIVGTGLAGVEVAFGLRASGWEG   29 (185)
T ss_dssp             CSCEEEEECCSHHHHHHHHHHHHTTCCS
T ss_pred             CCCCEEEECCcHHHHHHHHHHHHcCCce
Confidence            5789999999999999999999999864

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=82.44  E-value=6.9  Score=28.23  Aligned_cols=44  Identities=14%  Similarity=0.147  Sum_probs=30.7

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCC
Q 018075          180 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGA  224 (361)
Q Consensus       180 ~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~  224 (361)
                      ++|-++|.|.+|...+.-+...|. .++.-+..++..+++++.+.
T Consensus         1 ekIg~IGlG~MG~~ma~~L~~~g~-~~~~~~~~~~~~~~~~~~~~   44 (156)
T d2cvza2           1 EKVAFIGLGAMGYPMAGHLARRFP-TLVWNRTFEKALRHQEEFGS   44 (156)
T ss_dssp             CCEEEECCSTTHHHHHHHHHTTSC-EEEECSSTHHHHHHHHHHCC
T ss_pred             CeEEEEeHHHHHHHHHHHHHhCCC-EEEEeCCHHHHHHHHHHcCC
Confidence            578899999999888886666666 56555555555566665553

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=82.18  E-value=0.52  Score=38.35  Aligned_cols=31  Identities=26%  Similarity=0.447  Sum_probs=26.9

Q ss_pred             EEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075          181 NVMIMGSGPIGLVTLLAARAFGAPRIIITDVD  212 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~  212 (361)
                      +|+|+|+|..|+.++..+...|. .|..++.+
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~-~V~vlE~~   32 (347)
T d2ivda1           2 NVAVVGGGISGLAVAHHLRSRGT-DAVLLESS   32 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHTTTC-CEEEECSS
T ss_pred             eEEEECCCHHHHHHHHHHHhCCC-CEEEEecC
Confidence            58999999999999999999999 57888654

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=82.13  E-value=1.7  Score=34.63  Aligned_cols=33  Identities=18%  Similarity=0.306  Sum_probs=27.1

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEEe
Q 018075          177 GPETNVMIMGSGPIGLVTLLAAR-AFGAPRIIITD  210 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~-~~g~~~vv~v~  210 (361)
                      -+|.+|+|.|.|.+|..+++++. ..|+ +++++.
T Consensus        30 l~g~~v~IqGfGnVG~~~a~~L~~~~G~-kvv~vs   63 (239)
T d1gtma1          30 LKGKTIAIQGYGNAGYYLAKIMSEDFGM-KVVAVS   63 (239)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTCC-EEEEEE
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHhcCc-ceeecc
Confidence            47899999999999999998764 5688 566663

>d1ej0a_ c.66.1.2 (A:) RNA methyltransferase FtsJ {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: RNA methyltransferase FtsJ
domain: RNA methyltransferase FtsJ
species: Escherichia coli [TaxId: 562]

Probab=81.83  E-value=5.4  Score=29.88  Aligned_cols=97  Identities=18%  Similarity=0.206  Sum_probs=52.5

Q ss_pred             CCCCCCEEEEECC--CHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCc
Q 018075          175 NVGPETNVMIMGS--GPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       175 ~~~~g~~vlI~G~--g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      -++++.+||=+|+  |+--+.+.+...  ....+++++..+..     ...-...+.  .+..+..............++
T Consensus        19 l~k~~~~vlDLg~aPGgw~q~~~~~~~--~~~~v~~vDl~~~~-----~i~~~~~~~--~d~~~~~~~~~~~~~~~~~~~   89 (180)
T d1ej0a_          19 LFKPGMTVVDLGAAPGGWSQYVVTQIG--GKGRIIACDLLPMD-----PIVGVDFLQ--GDFRDELVMKALLERVGDSKV   89 (180)
T ss_dssp             CCCTTCEEEEESCTTCHHHHHHHHHHC--TTCEEEEEESSCCC-----CCTTEEEEE--SCTTSHHHHHHHHHHHTTCCE
T ss_pred             ccCCCCeEEEEeccCCcceEEEEeecc--ccceEEEeeccccc-----ccCCceEee--cccccchhhhhhhhhccCcce
Confidence            3689999988885  554454444332  33468888876522     111111222  111121111111122245689


Q ss_pred             cEEEEcc-----CCh------------HHHHHHHHhhcCCCEEEE
Q 018075          253 DVSFDCV-----GFD------------KTMSTALNATRPGGKVCL  280 (361)
Q Consensus       253 d~vld~~-----g~~------------~~~~~~~~~l~~~G~~v~  280 (361)
                      |+|+.-.     |..            ..+.-+.+.|++||.+|+
T Consensus        90 DlVlSD~ap~~sg~~~~d~~~~~~L~~~~l~~a~~~Lk~gG~fV~  134 (180)
T d1ej0a_          90 QVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVV  134 (180)
T ss_dssp             EEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             eEEEecccchhcccchhHHHHHHHHHHHHHHhhhhccCCCCcEEE
Confidence            9998743     332            244556788999999986

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=81.70  E-value=0.62  Score=39.71  Aligned_cols=31  Identities=19%  Similarity=0.269  Sum_probs=26.3

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeC
Q 018075          181 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDV  211 (361)
Q Consensus       181 ~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~  211 (361)
                      +|||.| +|-+|...+..+...|..++++++.
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~   33 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDK   33 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEEC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeC
Confidence            699998 6999999999888889877777764

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=81.68  E-value=2.3  Score=34.57  Aligned_cols=72  Identities=18%  Similarity=0.231  Sum_probs=46.4

Q ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHH----cCCCEEeecCCCccchhHHHHHHHhhcCCCc
Q 018075          177 GPETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARN----LGADETAKVSTDIEDVDTDVGKIQNAMGSGI  252 (361)
Q Consensus       177 ~~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~----lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (361)
                      +.+-+||=+|+|+ |..++.+++......|+++|.+++..+.+++    ++...+..+..   ++...+      .+.+|
T Consensus       107 ~~~~~vlDlGtGS-G~I~i~la~~~p~~~v~avDis~~Al~~A~~Na~~~~~~~v~~~~~---d~~~~~------~~~~f  176 (274)
T d2b3ta1         107 EQPCRILDLGTGT-GAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQS---DWFSAL------AGQQF  176 (274)
T ss_dssp             SSCCEEEEETCTT-SHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECC---STTGGG------TTCCE
T ss_pred             ccccceeeeehhh-hHHHHHHHhhCCcceeeeccchhHHHhHHHHHHHHhCcccceeeec---cccccc------CCCce
Confidence            4456777777665 6667778887754489999999988776654    56543322222   332221      24689


Q ss_pred             cEEEEc
Q 018075          253 DVSFDC  258 (361)
Q Consensus       253 d~vld~  258 (361)
                      |+++.+
T Consensus       177 DlIvsN  182 (274)
T d2b3ta1         177 AMIVSN  182 (274)
T ss_dssp             EEEEEC
T ss_pred             eEEEec
Confidence            999985

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=81.62  E-value=1.1  Score=34.32  Aligned_cols=88  Identities=16%  Similarity=0.179  Sum_probs=55.6

Q ss_pred             CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCChhHHHHHHHcCCCEEeecCCCccchhHHHHHHHhhcCCCccEEEE
Q 018075          178 PETNVMIMGSGPIGLVTLLAARAFGAPRIIITDVDVQRLSIARNLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVSFD  257 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vld  257 (361)
                      .+.+|.|+|.|.+|...+++++.+|+ .|++.+......       ......+    .++.+.+        ...|++.-
T Consensus        43 ~~~~vgiiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~~-------~~~~~~~----~~l~ell--------~~sDii~i  102 (188)
T d1sc6a1          43 RGKKLGIIGYGHIGTQLGILAESLGM-YVYFYDIENKLP-------LGNATQV----QHLSDLL--------NMSDVVSL  102 (188)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCCC-------CTTCEEC----SCHHHHH--------HHCSEEEE
T ss_pred             cceEEEEeecccchhhhhhhcccccc-eEeeccccccch-------hhhhhhh----hhHHHHH--------hhccceee
Confidence            57899999999999999999999999 688887643211       1111111    1222222        24688877


Q ss_pred             ccCChH-----HHHHHHHhhcCCCEEEEEccCC
Q 018075          258 CVGFDK-----TMSTALNATRPGGKVCLIGLAK  285 (361)
Q Consensus       258 ~~g~~~-----~~~~~~~~l~~~G~~v~~g~~~  285 (361)
                      +..-..     .-.+.++.|+++..+|-++...
T Consensus       103 ~~plt~~T~~li~~~~l~~mk~~a~lIN~aRG~  135 (188)
T d1sc6a1         103 HVPENPSTKNMMGAKEISLMKPGSLLINASRGT  135 (188)
T ss_dssp             CCCSSTTTTTCBCHHHHHHSCTTEEEEECSCSS
T ss_pred             cccCCcchhhhccHHHHhhCCCCCEEEEcCcHH
Confidence            654221     2245778888888777654443

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.59  E-value=0.64  Score=38.67  Aligned_cols=31  Identities=19%  Similarity=0.270  Sum_probs=26.1

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeC
Q 018075          180 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITDV  211 (361)
Q Consensus       180 ~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~  211 (361)
                      .+|||.| +|-+|...+..+...|. .|+++++
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~-~V~~~d~   33 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGH-EVTVVDN   33 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeC
Confidence            5899998 59999999998888898 5777764

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.38  E-value=2.2  Score=35.50  Aligned_cols=30  Identities=30%  Similarity=0.441  Sum_probs=25.5

Q ss_pred             CEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEe
Q 018075          180 TNVMIMG-SGPIGLVTLLAARAFGAPRIIITD  210 (361)
Q Consensus       180 ~~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~  210 (361)
                      ++|||.| +|-+|...+..+...|. .|++++
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~-~V~~ld   33 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGY-LPVVID   33 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTC-CEEEEE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcC-EEEEEE
Confidence            6899998 69999999998888898 467764

>d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=81.12  E-value=3.5  Score=30.55  Aligned_cols=98  Identities=19%  Similarity=0.203  Sum_probs=60.6

Q ss_pred             EEEEECCCHHHHHHHHHHHHc-CCCEEEEE-eC--ChhHHHHHHHcCCCE--------------------EeecCCCccc
Q 018075          181 NVMIMGSGPIGLVTLLAARAF-GAPRIIIT-DV--DVQRLSIARNLGADE--------------------TAKVSTDIED  236 (361)
Q Consensus       181 ~vlI~G~g~~G~~ai~la~~~-g~~~vv~v-~~--~~~~~~~~~~lg~~~--------------------~~~~~~~~~~  236 (361)
                      +|.|.|-|-+|.++...+... .. .++++ +.  +.+...++-++...+                    +..+..  .+
T Consensus         2 kigINGfGRIGR~v~R~~~~~~~~-~iv~INd~~~d~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~i~~~--~~   78 (166)
T d2b4ro1           2 KLGINGFGRIGRLVFRAAFGRKDI-EVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAE--KD   78 (166)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCSSE-EEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEESSCEEEEECC--SS
T ss_pred             eEEEECCCHHHHHHHHHHhhCCCc-EEEEECCCCCChHHhhhhhhcccccccceeeeccCCceEEecCcEEEEEeC--CC
Confidence            688999999999999877654 45 45555 32  345556655542111                    101111  11


Q ss_pred             hhHHHHHHHhhcCCCccEEEEccCChHHHHHHHHhhcCCCEEEEEccCCC
Q 018075          237 VDTDVGKIQNAMGSGIDVSFDCVGFDKTMSTALNATRPGGKVCLIGLAKT  286 (361)
Q Consensus       237 ~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~  286 (361)
                      ..+    +.+ ...++|+|+||+|.-...+.+..+|..|.+-|.+..+..
T Consensus        79 p~~----i~W-~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP~k  123 (166)
T d2b4ro1          79 PSQ----IPW-GKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPK  123 (166)
T ss_dssp             GGG----CCH-HHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCS
T ss_pred             hHH----ccc-cccCCCEEEEecccccchhhhhhhhccCCCEEEEecccc
Confidence            111    100 124799999999977667788899999987777765543

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.96  E-value=0.85  Score=35.45  Aligned_cols=30  Identities=27%  Similarity=0.513  Sum_probs=25.6

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Q 018075          182 VMIMGSGPIGLVTLLAARAFGAPRIIITDVD  212 (361)
Q Consensus       182 vlI~G~g~~G~~ai~la~~~g~~~vv~v~~~  212 (361)
                      ++|+|+|+.|+.++..+...|. +|+.++..
T Consensus         6 viIIG~GpaG~~aA~~aar~G~-kV~vIEk~   35 (221)
T d3grsa1           6 YLVIGGGSGGLASARRAAELGA-RAAVVESH   35 (221)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCC-EEEEEecc
Confidence            6788999999999999999999 57777653

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=80.84  E-value=0.85  Score=34.78  Aligned_cols=31  Identities=23%  Similarity=0.288  Sum_probs=25.9

Q ss_pred             CEEEEECCCHHHHHHHHHHHHcCCCEEEEEeC
Q 018075          180 TNVMIMGSGPIGLVTLLAARAFGAPRIIITDV  211 (361)
Q Consensus       180 ~~vlI~G~g~~G~~ai~la~~~g~~~vv~v~~  211 (361)
                      .+|+|+|+|+.|+.++..+...|.+ ++.++.
T Consensus         6 ~~VvIIGgGpaGl~aA~~~ar~g~~-v~vie~   36 (192)
T d1vdca1           6 TRLCIVGSGPAAHTAAIYAARAELK-PLLFEG   36 (192)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTTCC-CEEECC
T ss_pred             ceEEEECCCHHHHHHHHHHHHcCCc-EEEEEe
Confidence            5799999999999999888889995 666653

>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=80.81  E-value=0.77  Score=35.73  Aligned_cols=29  Identities=24%  Similarity=0.608  Sum_probs=25.1

Q ss_pred             EEEECCCHHHHHHHHHHHHcCCCEEEEEeC
Q 018075          182 VMIMGSGPIGLVTLLAARAFGAPRIIITDV  211 (361)
Q Consensus       182 vlI~G~g~~G~~ai~la~~~g~~~vv~v~~  211 (361)
                      |+|+|+|+.|+.|+..|...|. +|+.++.
T Consensus         6 viIIGgGpAGl~aA~~aar~G~-~V~viE~   34 (229)
T d3lada1           6 VIVIGAGPGGYVAAIKSAQLGL-KTALIEK   34 (229)
T ss_dssp             EEEECCSHHHHHHHHHHHHHTC-CEEEEEC
T ss_pred             EEEECcCHHHHHHHHHHHHCCC-eEEEEec
Confidence            6788999999999999999999 5777764

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=80.80  E-value=1.3  Score=33.60  Aligned_cols=92  Identities=17%  Similarity=0.202  Sum_probs=52.8

Q ss_pred             EEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCChhH-HHHHH---HcCCCEEeecCCCccchhHHHHHHHhhcCCCccEE
Q 018075          181 NVMIMG-SGPIGLVTLLAARAFGAPRIIITDVDVQR-LSIAR---NLGADETAKVSTDIEDVDTDVGKIQNAMGSGIDVS  255 (361)
Q Consensus       181 ~vlI~G-~g~~G~~ai~la~~~g~~~vv~v~~~~~~-~~~~~---~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v  255 (361)
                      +|.|+| +|-+|+-.++++...-.-.+..+.++... ..+.+   .+.........    ...+       ..-.+.|++
T Consensus         7 kVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~~~~~~~~~~~~~~~~~~----~~~~-------~~~~~~Dvv   75 (183)
T d2cvoa1           7 RIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFGSVFPHLITQDLPNLV----AVKD-------ADFSNVDAV   75 (183)
T ss_dssp             EEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSCHHHHCGGGTTSCCCCCB----CGGG-------CCGGGCSEE
T ss_pred             EEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCccccccccccccccccch----hhhh-------hhhccccee
Confidence            678899 59999999999887642234444333221 11111   11111100000    0000       012479999


Q ss_pred             EEccCChHHHHHHHHhhcCCCEEEEEccC
Q 018075          256 FDCVGFDKTMSTALNATRPGGKVCLIGLA  284 (361)
Q Consensus       256 ld~~g~~~~~~~~~~~l~~~G~~v~~g~~  284 (361)
                      |-+.+.. ........+...+..+.....
T Consensus        76 f~alp~~-~s~~~~~~l~~~~~~v~~~~~  103 (183)
T d2cvoa1          76 FCCLPHG-TTQEIIKGLPQELKIVDLSAD  103 (183)
T ss_dssp             EECCSSS-HHHHHHHTSCSSCEEEECSST
T ss_pred             eeccccc-hHHHHHHHHHhcCcccccchh
Confidence            9999977 666777888888988776543

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=80.68  E-value=5.7  Score=29.37  Aligned_cols=74  Identities=15%  Similarity=0.208  Sum_probs=42.8

Q ss_pred             CCCEEEEECCCHHHHH--HHHHHHHc-CC--CEEEEEeCChhHHHHH--------HHcCCCEEeecCCCccchhHHHHHH
Q 018075          178 PETNVMIMGSGPIGLV--TLLAARAF-GA--PRIIITDVDVQRLSIA--------RNLGADETAKVSTDIEDVDTDVGKI  244 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~--ai~la~~~-g~--~~vv~v~~~~~~~~~~--------~~lg~~~~~~~~~~~~~~~~~~~~~  244 (361)
                      +.-+|.|+|+|++|..  ...+++.. ..  ..++-+|.++++.+..        ..++...-+...   .+..+.+   
T Consensus         2 k~~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~eal---   75 (167)
T d1u8xx1           2 KSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT---TDPEEAF---   75 (167)
T ss_dssp             CCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE---SCHHHHH---
T ss_pred             CCceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec---CChhhcc---
Confidence            4557889998876643  33444433 22  3689999999886532        223433222211   2222222   


Q ss_pred             HhhcCCCccEEEEccCCh
Q 018075          245 QNAMGSGIDVSFDCVGFD  262 (361)
Q Consensus       245 ~~~~~~~~d~vld~~g~~  262 (361)
                           .+.|+|+.+.|.+
T Consensus        76 -----~~AD~Vvitag~~   88 (167)
T d1u8xx1          76 -----TDVDFVMAHIRVG   88 (167)
T ss_dssp             -----SSCSEEEECCCTT
T ss_pred             -----CCCCEEEECCCcC
Confidence                 5899999999865

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=80.48  E-value=3.5  Score=30.68  Aligned_cols=74  Identities=19%  Similarity=0.321  Sum_probs=44.4

Q ss_pred             CCCEEEEECCCHHHHHHH---HHHHHcC--CCEEEEEeCChhHHHH--------HHHcCCCEEeecCCCccchhHHHHHH
Q 018075          178 PETNVMIMGSGPIGLVTL---LAARAFG--APRIIITDVDVQRLSI--------ARNLGADETAKVSTDIEDVDTDVGKI  244 (361)
Q Consensus       178 ~g~~vlI~G~g~~G~~ai---~la~~~g--~~~vv~v~~~~~~~~~--------~~~lg~~~~~~~~~~~~~~~~~~~~~  244 (361)
                      |.-++.|+|+|.+|....   .+++...  ...++-+|.++++.+.        ...++...-+...   .+..+.+   
T Consensus         1 p~mKI~iIGaGsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~---td~~eaL---   74 (171)
T d1obba1           1 PSVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKT---MNLDDVI---   74 (171)
T ss_dssp             CCCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEE---SCHHHHH---
T ss_pred             CCcEEEEECCCHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEe---CChhhcc---
Confidence            456899999998885532   2333222  3479999999887653        2234433222211   2322222   


Q ss_pred             HhhcCCCccEEEEccCCh
Q 018075          245 QNAMGSGIDVSFDCVGFD  262 (361)
Q Consensus       245 ~~~~~~~~d~vld~~g~~  262 (361)
                           .+.|+|+.+.+..
T Consensus        75 -----~dad~Vv~~~~~g   87 (171)
T d1obba1          75 -----IDADFVINTAMVG   87 (171)
T ss_dssp             -----TTCSEEEECCCTT
T ss_pred             -----cCCCeEeeecccc
Confidence                 5799999998866