Citrus Sinensis ID: 018103

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360
MAAAIDMYNSSRSISDPFREELMKALEPFMKIASSNCSSSSGFSSSSYSSYSSYSSYSPTTSSEANFFYPDGYNLCSPSYDTPMFSQGLMSFEQQPISSLGLNHLTPSQILQIQAQINFQQQQQQQVASLASRASISSPKSNLLSPKAVPMKHVSNAQVAKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDQAAYKLRGEFARLNFPHLKHHGAHVTGEFGDYKPLHASVDAKLQAICQNLALNNNVQKQTSKQQQQQQQEAETKPVLLPATAANIKVENTSATSLSSPTPDHSLSDAGSSSPESDVSFLDFNDTKWETEMDAFGLEKYPSVEIDWEAIRKLSEF
ccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccEEEEcccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccc
************************ALEP*************************************NFFYPDGYNLCSPSYDTPMFSQGLM***********LNHL*********************************************************TKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDQAAYKLRGEFARLNFPHLK****************HA****KLQAICQNLA******************************************************************FLDFNDTKWETEMDAFGLEKYPSVEIDWEAIRKLSE*
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MAAAIDMYNSSRSISDPFREELMKALEPFMKIASSNCSSSSGFSSSSYSSYSSYSSYSPTTSSEANFFYPDGYNLCSPSYDTPMFSQGLMSFEQQPISSLGLNHLTPSQILQIQAQINFQQQQQQQVASLASRASISSPKSNLLSPKAVPMKHVSNAQVAKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDQAAYKLRGEFARLNFPHLKHHGAHVTGEFGDYKPLHASVDAKLQAICQNLALNNNVQKQTSKQQQQQQQEAETKPVLLPATAANIKVENTSATSLSSPTPDHSLSDAGSSSPESDVSFLDFNDTKWETEMDAFGLEKYPSVEIDWEAIRKLSEF

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Ethylene-responsive transcription factor RAP2-4 Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways.probableQ8H1E4

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1GCC, chain A
Confidence level:very confident
Coverage over the Query: 164-224
View the alignment between query and template
View the model in PyMOL