Citrus Sinensis ID: 018201

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------36
Protein Sequence
MAGSGCAVKGGCPTDYIALAIASLFFILLLARFILPFVVHKVPRTKSSGFWIPVIQVFASFNLLLSLVLSDNFLKFQRRRWWQSCYIWGVWIEGPLGFGLLMSCRIAQAFQLYYIFVRKHLPPIRSYVFLPLVLMPWLIAATFIQVMRPLNDRCHMRVHWIIPFLFLHVVYVASLVGFMAAIRHIEFRFDELRDLWQGIIVSASSIGLWVFAYLLNEIHDDISWLQVASRFLLLVMGGILVVVFFSISSSEPLLSQISLRKREPKEFETMGQALGIPDSGLLLRREPTPVIDPNEPLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYIVAGL
Secondary Structure (PSIPRED)
ccccccccccccccHHHHHHHHHHHHHHHHHHHHHcEEEEEcccccccccEEHHHHHHHHHHHHHHHHHHccHHHHccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEHHHHHHHHHHHHHHHHHHHHHHEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHEEEEEEEEccccccHHHHcccccccHHHHHHHHHccccccccccccccccccccccHHHHHHHcHHHHHHHHHHHHHHcccccEEHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHEEccccccccccEHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHccEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEccccccccHHHEEcccccccHHHHHHHHcccccccEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEcHHHHHHccccccccHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
magsgcavkggcptDYIALAIASLFFILLLARFILpfvvhkvprtkssgfwiPVIQVFASFNLLLSLVLSDNFLKFQRRRWWQSCYIwgvwiegplgfGLLMSCRIAQAFQLYYIFVRkhlppirsyvflplVLMPWLIAATFIQVMRplndrchmrvhWIIPFLFLHVVYVASLVGFMAAIRHIEFRFDELRDLWQGIIVSASSIGLWVFAYLLNEIHDDISWLQVASRFLLLVMGGILVVVFFSIsssepllsqislrkrepkefetmgqalgipdsglllrreptpvidpnepldklLLNKKFRQSFMAFAdsclagesvHFFEEvhehgkipvddHVRRIYMARHIIEKYIVAGL
Flexible Loop (DISEMBL)
magsgcavkggCPTDYIALAIASLFFILLLARFILPFVVHKVPRTKSSGFWIPVIQVFASFNLLLSLVLSDNFLKFQRRRWWQSCYIWGVWIEGPLGFGLLMSCRIAQAFQLYYIFVRKHLPPIRSYVFLPLVLMPWLIAATFIQVMRPLNDRCHMRVHWIIPFLFLHVVYVASLVGFMAAIRHIEFRFDELRDLWQGIIVSASSIGLWVFAYLLNEIHDDISWLQVASRFLLLVMGGILVVVFFSISSSEPLLSQISLRKREPKEfetmgqalgipdsgllLRREPTPVIDPNEPLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVhehgkipvddhvRRIYMARHIIEKYIVAGL
Low Complexity Region (SEG)
MAGSGCAVKGGCPTDYialaiaslffilllarfilpfVVHKVPRTKSSGFWIPVIQvfasfnlllslvlsdnflKFQRRRWWQSCYIWGVWIEGPLGFGLLMSCRIAQAFQLYYIFVRKHLPPIRSYVFLPLVLMPWLIAATFIQVMRPLNDRCHMRVHWIIPFLFLHVVYVASLVGFMAAIRHIEFRFDELRDLWQGIIVSASSIGLWVFAYLLNEIHDDISWLQVASRflllvmggilvvvffsisssEPLLSQISLRKREPKEFETMGQALGIPDSGLLLRREPTPVIDPNEPLDKLLLNKKFRQSFMAFADSCLAGESvhffeevhehGKIPVDDHVRRIYMARHIIEKYIVAGL
Disordered region (IsUnstruct)
*****CAVKGGCPTDYIALAIASLFFILLLARFILPFVVHKVPRTKSSGFWIPVIQVFASFNLLLSLVLSDNFLKFQRRRWWQSCYIWGVWIEGPLGFGLLMSCRIAQAFQLYYIFVRKHLPPIRSYVFLPLVLMPWLIAATFIQVMRPLNDRCHMRVHWIIPFLFLHVVYVASLVGFMAAIRHIEFRFDELRDLWQGIIVSASSIGLWVFAYLLNEIHDDISWLQVASRFLLLVMGGILVVVFFSIS*********************************L*************PLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYIVA**
Disordered Region (DISOPRED)
*********GGCPTDYIALAIASLFFILLLARFILPFVVHKVPRTKSSGFWIPVIQVFASFNLLLSLVLSDNFLKFQRRRWWQSCYIWGVWIEGPLGFGLLMSCRIAQAFQLYYIFVRKHLPPIRSYVFLPLVLMPWLIAATFIQVMRPLNDRCHMRVHWIIPFLFLHVVYVASLVGFMAAIRHIEFRFDELRDLWQGIIVSASSIGLWVFAYLLNEIHDDISWLQVASRFLLLVMGGILVVVFFSISSSEPLL*****************QALGIPDSGLLLRREPTPVIDPNEPLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYIVAGL
Disordered Region (DISEMBL)
MAGSGCAVKGGCPTDYIALAIASLFFILLLARFILPFVVHKVPRTKSSGFWIPVIQVFASFNLLLSLVLSDNFLKFQRRRWWQSCYIWGVWIEGPLGFGLLMSCRIAQAFQLYYIFVRKHLPPIRSYVFLPLVLMPWLIAATFIQVMRPLNDRCHMRVHWIIPFLFLHVVYVASLVGFMAAIRHIEFRFDELRDLWQGIIVSASSIGLWVFAYLLNEIHDDISWLQVASRFLLLVMGGILVVVFFSISSSEPLLSQISLRKREPKEFETMGQALGIPDSGLLLRREPTPVIDPNEPLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYIVAGL
Disordered Region (DISPRO)
*********GGCPTDYIALAIASLFFILLLARFILPFVVHKVPRTKSSGFWIPVIQVFASFNLLLSLVLSDNFLKFQRRRWWQSCYIWGVWIEGPLGFGLLMSCRIAQAFQLYYIFVRKHLPPIRSYVFLPLVLMPWLIAATFIQVMRPLNDRCHMRVHWIIPFLFLHVVYVASLVGFMAAIRHIEFRFDELRDLWQGIIVSASSIGLWVFAYLLNEIHDDISWLQVASRFLLLVMGGILVVVFFSISSSEPLLSQISLRKREPKEFETMGQALGIPDSGLLLRREPTPVIDPNEPLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYIVAGL
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAGSGCAVKGGCPTDYIALAIASLFFILLLARFILPFVVHKVPRTKSSGFWIPVIQVFASFNLLLSLVLSDNFLKFQRRRWWQSCYIWGVWIEGPLGFGLLMSCRIAQAFQLYYIFVRKHLPPIRSYVFLPLVLMPWLIAATFIQVMRPLNDRCHMRVHWIIPFLFLHVVYVASLVGFMAAIRHIEFRFDELRDLWQGIIVSASSIGLWVFAYLLNEIHDDISWLQVASRFLLLVMGGILVVVFFSISSSEPLLSQISLRKREPKEFETMGQALGIPDSGLLLRREPTPVIDPNEPLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYIVAGL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	359	2.2.26 [Sep-21-2011]
Q8H1F2	459	Regulator of G-protein si	yes	no	0.991	0.775	0.682	1e-151

>sp|Q8H1F2|RGS1_ARATH Regulator of G-protein signaling 1 OS=Arabidopsis thaliana GN=RGS1 PE=1 SV=1

 Score =  534 bits (1376), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 243/356 (68%), Positives = 301/356 (84%)

Query: 3   GSGCAVKGGCPTDYIALAIASLFFILLLARFILPFVVHKVPRTKSSGFWIPVIQVFASFN 62
            SGCA+ GGCP+DY+A+AI+ + F +LL+R +LP ++HK PRT SS FWIPVIQV +SFN
Sbjct: 2   ASGCALHGGCPSDYVAVAISVICFFVLLSRSVLPCLIHKAPRTNSSSFWIPVIQVISSFN 61

Query: 63  LLLSLVLSDNFLKFQRRRWWQSCYIWGVWIEGPLGFGLLMSCRIAQAFQLYYIFVRKHLP 122
           LL S+++S N L+F+ + WW+ CY+W VWIEGPLGFGLLMSCRI QAFQLY+IFV+K LP
Sbjct: 62  LLFSIMMSVNLLRFRTKHWWRYCYLWAVWIEGPLGFGLLMSCRITQAFQLYFIFVKKRLP 121

Query: 123 PIRSYVFLPLVLMPWLIAATFIQVMRPLNDRCHMRVHWIIPFLFLHVVYVASLVGFMAAI 182
           P++SY+FLPLVL+PW+  A  I   +PLND+CHM + W  P   LH +YV +L+ F  A+
Sbjct: 122 PVKSYIFLPLVLLPWIFGAAIIHATKPLNDKCHMGLQWTFPVAGLHALYVLALIAFTRAV 181

Query: 183 RHIEFRFDELRDLWQGIIVSASSIGLWVFAYLLNEIHDDISWLQVASRFLLLVMGGILVV 242
           RH+EFRFDELRDLW+GI+VSA+SI +WV A++LNEIH++ISWLQVASRF+LLV GGILVV
Sbjct: 182 RHVEFRFDELRDLWKGILVSATSIVIWVTAFVLNEIHEEISWLQVASRFVLLVTGGILVV 241

Query: 243 VFFSISSSEPLLSQISLRKREPKEFETMGQALGIPDSGLLLRREPTPVIDPNEPLDKLLL 302
           VFFSISS++PLLSQISL+KR+  EF+ MGQALGIPDSGLL R+E    +DPNEPLDKLLL
Sbjct: 242 VFFSISSNQPLLSQISLKKRQNFEFQRMGQALGIPDSGLLFRKEEFRPVDPNEPLDKLLL 301

Query: 303 NKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYIVAG 358
           NK+FR SFM FADSC AGE++HFFEEV+EHGKIP DD +RRIYMARHI+EK+IVAG
Sbjct: 302 NKRFRHSFMEFADSCYAGETLHFFEEVYEHGKIPEDDSIRRIYMARHIMEKFIVAG 357

Glucose-regulated GTPase-accelerating protein (GAP) for the GTP-bound self-activating heterotrimeric G alpha protein GPA1. Cooperates with G beta-gamma dimers to maintain an unactivated but fully functional pool of GPA1. Phosphorylation-dependent endocytosis of RGS1 physically uncouples the two proteins, resulting in signal activation. Free AGB1 is essential, but not sufficient, for RGS1 endocytosis. Modulates cell proliferation, abscisic acid (ABA) and drought stress signal transduction by acting in an hexokinase-independent glucose-signaling pathway. Involved in the shapes of leaves, the development of floral buds, the elongation of stems, siliques, and hypocotyls, the time of flowering and the regulation of guard-cell K(+) and anion channels. Important for the kinetics of voltage activation of inward K(+) current but not for the current amplitude.
Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	359
225425938	466	PREDICTED: uncharacterized protein LOC10	0.988	0.761	0.738	1e-158
224100095	466	predicted protein [Populus trichocarpa]	0.986	0.759	0.751	1e-153
297814846	459	regulator of G-protein signaling 1 [Arab	0.991	0.775	0.693	1e-151
20268776	459	unknown protein [Arabidopsis thaliana]	0.991	0.775	0.682	1e-149
22331342	459	regulator of G-protein signaling 1 [Arab	0.991	0.775	0.682	1e-149
356569207	551	PREDICTED: uncharacterized protein LOC10	0.986	0.642	0.711	1e-149
356540199	464	PREDICTED: uncharacterized protein LOC10	0.983	0.760	0.711	1e-148
449435446	464	PREDICTED: uncharacterized protein LOC10	0.980	0.758	0.691	1e-143
357463151	475	hypothetical protein MTR_3g086170 [Medic	0.997	0.753	0.690	1e-137
255547936	404	signal transducer, putative [Ricinus com	0.810	0.720	0.773	1e-135

>gi|225425938|ref|XP_002267857.1| PREDICTED: uncharacterized protein LOC100247607 [Vitis vinifera] gi|297738317|emb|CBI27518.3| unnamed protein product [Vitis vinifera]

 Score =  564 bits (1453), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 262/355 (73%), Positives = 304/355 (85%)

Query: 4   SGCAVKGGCPTDYIALAIASLFFILLLARFILPFVVHKVPRTKSSGFWIPVIQVFASFNL 63
             C   GGCP+DYIA+AI+ L FILLL +  LPF+VHKVPR K SGFWIPVIQVFAS NL
Sbjct: 2   GSCGKNGGCPSDYIAVAISLLCFILLLIKATLPFLVHKVPRPKGSGFWIPVIQVFASLNL 61

Query: 64  LLSLVLSDNFLKFQRRRWWQSCYIWGVWIEGPLGFGLLMSCRIAQAFQLYYIFVRKHLPP 123
           LLS+V+S NFLKF+++ WWQSCY+W VW+EGPLGFGLL+SCRI QAFQLYYIFV++ LPP
Sbjct: 62  LLSIVMSINFLKFKKKHWWQSCYLWAVWVEGPLGFGLLLSCRIVQAFQLYYIFVKRRLPP 121

Query: 124 IRSYVFLPLVLMPWLIAATFIQVMRPLNDRCHMRVHWIIPFLFLHVVYVASLVGFMAAIR 183
           IRSYVFLP +++PW+  A  +   +PLN+RCH+   WIIP + LH  YVA+LVGF  AIR
Sbjct: 122 IRSYVFLPTIVLPWIAGAALLHKKKPLNERCHLGTRWIIPVVLLHTTYVAALVGFTVAIR 181

Query: 184 HIEFRFDELRDLWQGIIVSASSIGLWVFAYLLNEIHDDISWLQVASRFLLLVMGGILVVV 243
           HIEFRF EL+DLW+GI+VS SS+GLWV AY+LNEIHDDI WLQV SRFLLL+M  ILV+ 
Sbjct: 182 HIEFRFHELKDLWRGILVSTSSVGLWVTAYILNEIHDDIEWLQVTSRFLLLIMASILVLA 241

Query: 244 FFSISSSEPLLSQISLRKREPKEFETMGQALGIPDSGLLLRREPTPVIDPNEPLDKLLLN 303
           FFS+SSS+PLLS++SLRKRE  EFETMG+ALGIPDSGLLL+REP P IDPNEPLDKLLLN
Sbjct: 242 FFSMSSSQPLLSKMSLRKREATEFETMGRALGIPDSGLLLQREPAPDIDPNEPLDKLLLN 301

Query: 304 KKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYIVAG 358
           K FRQSFMAFADSCLAGESVHF++EVHE  KIPVDD VRRIYMARHIIEKY++AG
Sbjct: 302 KGFRQSFMAFADSCLAGESVHFYDEVHELAKIPVDDPVRRIYMARHIIEKYVIAG 356

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224100095|ref|XP_002311742.1| predicted protein [Populus trichocarpa] gi|222851562|gb|EEE89109.1| predicted protein [Populus trichocarpa]

 Score =  548 bits (1412), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 266/354 (75%), Positives = 308/354 (87%)

Query: 5   GCAVKGGCPTDYIALAIASLFFILLLARFILPFVVHKVPRTKSSGFWIPVIQVFASFNLL 64
            CAV+GGCP+DYIA++IA L F LLL+R + PF++HK+PRT  SGFWIPVIQVF SFNLL
Sbjct: 11  SCAVQGGCPSDYIAISIAILAFFLLLSRLLFPFLIHKIPRTNGSGFWIPVIQVFGSFNLL 70

Query: 65  LSLVLSDNFLKFQRRRWWQSCYIWGVWIEGPLGFGLLMSCRIAQAFQLYYIFVRKHLPPI 124
           LS+V+S NFLKF++  WWQSCY+W VWIEGPLGFGLL+SCRIAQAFQL++IFV++ LPPI
Sbjct: 71  LSIVMSINFLKFEKSHWWQSCYVWAVWIEGPLGFGLLLSCRIAQAFQLHHIFVKRQLPPI 130

Query: 125 RSYVFLPLVLMPWLIAATFIQVMRPLNDRCHMRVHWIIPFLFLHVVYVASLVGFMAAIRH 184
           RSY FLPL+L+PW+  A F+ V RPLNDRCHM  HWI+P + LH +YVA+LVGF  AIRH
Sbjct: 131 RSYFFLPLILLPWVAGAAFVHVKRPLNDRCHMGTHWIVPVVCLHTIYVAALVGFTWAIRH 190

Query: 185 IEFRFDELRDLWQGIIVSASSIGLWVFAYLLNEIHDDISWLQVASRFLLLVMGGILVVVF 244
           IEFRF+EL+DLWQGI+VS+ SIG+W  AY+ NE  DDI WLQVASR LLL+   +LV+ F
Sbjct: 191 IEFRFNELKDLWQGILVSSLSIGIWFAAYISNETRDDIWWLQVASRILLLITASVLVLFF 250

Query: 245 FSISSSEPLLSQISLRKREPKEFETMGQALGIPDSGLLLRREPTPVIDPNEPLDKLLLNK 304
           FSISSS+PLLSQISLRKREP EF+TMGQALGIPDSGLLL+ +  PVIDPNEPLDKLLLNK
Sbjct: 251 FSISSSQPLLSQISLRKREPLEFQTMGQALGIPDSGLLLQIDSVPVIDPNEPLDKLLLNK 310

Query: 305 KFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYIVAG 358
           +FRQSFMAFADSCLAGESVHF+ EVHEH KIPVDD VRRIYMARHIIEKYIVAG
Sbjct: 311 RFRQSFMAFADSCLAGESVHFYNEVHEHDKIPVDDPVRRIYMARHIIEKYIVAG 364

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297814846|ref|XP_002875306.1| regulator of G-protein signaling 1 [Arabidopsis lyrata subsp. lyrata] gi|297321144|gb|EFH51565.1| regulator of G-protein signaling 1 [Arabidopsis lyrata subsp. lyrata]

 Score =  541 bits (1395), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 247/356 (69%), Positives = 303/356 (85%)

Query: 3   GSGCAVKGGCPTDYIALAIASLFFILLLARFILPFVVHKVPRTKSSGFWIPVIQVFASFN 62
            SGCA+ GGCP+DY+A+AI+ + F +LL+R +LP ++HK PRT SS FWIPVIQV ASFN
Sbjct: 2   ASGCAIHGGCPSDYVAVAISVICFFVLLSRSVLPCLIHKAPRTNSSSFWIPVIQVIASFN 61

Query: 63  LLLSLVLSDNFLKFQRRRWWQSCYIWGVWIEGPLGFGLLMSCRIAQAFQLYYIFVRKHLP 122
           LL S+++S N L+F+ + WW+ CY+W VWIEGPLGFGLLM CRI QAFQLY+IFV+K LP
Sbjct: 62  LLFSIMMSVNLLRFRTKHWWRYCYLWAVWIEGPLGFGLLMGCRITQAFQLYFIFVKKRLP 121

Query: 123 PIRSYVFLPLVLMPWLIAATFIQVMRPLNDRCHMRVHWIIPFLFLHVVYVASLVGFMAAI 182
           PI+SY+FLPLVL+PW+  A  I   +PLND+CHMR+ W  P   LH +YV +L+ F  A+
Sbjct: 122 PIKSYIFLPLVLLPWIFGAAIIHATKPLNDKCHMRLQWTFPVAGLHALYVLALIAFTRAV 181

Query: 183 RHIEFRFDELRDLWQGIIVSASSIGLWVFAYLLNEIHDDISWLQVASRFLLLVMGGILVV 242
           RH+EFRFDELRDLW+GI+VSA+SI +WV A++LNEIH++ISWLQVASRF+LLV GGILVV
Sbjct: 182 RHVEFRFDELRDLWKGILVSATSIIIWVTAFVLNEIHEEISWLQVASRFVLLVTGGILVV 241

Query: 243 VFFSISSSEPLLSQISLRKREPKEFETMGQALGIPDSGLLLRREPTPVIDPNEPLDKLLL 302
           VFFSISS++PLLSQISL+KRE  EF+ MGQALGIPDSGLL R+E    +DPNEPLDKLLL
Sbjct: 242 VFFSISSNQPLLSQISLKKREHFEFQRMGQALGIPDSGLLFRKEEYRPVDPNEPLDKLLL 301

Query: 303 NKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYIVAG 358
           NK+FRQSFM FADSC AGE++HFFEEV+EHGKIPVDD +RRIYMARHI+EK+IV+G
Sbjct: 302 NKRFRQSFMEFADSCYAGETLHFFEEVYEHGKIPVDDSIRRIYMARHIMEKFIVSG 357

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|20268776|gb|AAM14091.1| unknown protein [Arabidopsis thaliana]

 Score =  534 bits (1376), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 243/356 (68%), Positives = 301/356 (84%)

Query: 3   GSGCAVKGGCPTDYIALAIASLFFILLLARFILPFVVHKVPRTKSSGFWIPVIQVFASFN 62
            SGCA+ GGCP+DY+A+AI+ + F +LL+R +LP ++HK PRT SS FWIPVIQV +SFN
Sbjct: 2   ASGCALHGGCPSDYVAVAISVICFFVLLSRSVLPCLIHKAPRTNSSSFWIPVIQVISSFN 61

Query: 63  LLLSLVLSDNFLKFQRRRWWQSCYIWGVWIEGPLGFGLLMSCRIAQAFQLYYIFVRKHLP 122
           LL S+++S N L+F+ + WW+ CY+W VWIEGPLGFGLLMSCRI QAFQLY+IFV+K LP
Sbjct: 62  LLFSIMMSVNLLRFRTKHWWRYCYLWAVWIEGPLGFGLLMSCRITQAFQLYFIFVKKRLP 121

Query: 123 PIRSYVFLPLVLMPWLIAATFIQVMRPLNDRCHMRVHWIIPFLFLHVVYVASLVGFMAAI 182
           P++SY+FLPLVL+PW+  A  I   +PLND+CHM + W  P   LH +YV +L+ F  A+
Sbjct: 122 PVKSYIFLPLVLLPWIFGAAIIHATKPLNDKCHMGLQWTFPVAGLHALYVLALIAFTRAV 181

Query: 183 RHIEFRFDELRDLWQGIIVSASSIGLWVFAYLLNEIHDDISWLQVASRFLLLVMGGILVV 242
           RH+EFRFDELRDLW+GI+VSA+SI +WV A++LNEIH++ISWLQVASRF+LLV GGILVV
Sbjct: 182 RHVEFRFDELRDLWKGILVSATSIVIWVTAFVLNEIHEEISWLQVASRFVLLVTGGILVV 241

Query: 243 VFFSISSSEPLLSQISLRKREPKEFETMGQALGIPDSGLLLRREPTPVIDPNEPLDKLLL 302
           VFFSISS++PLLSQISL+KR+  EF+ MGQALGIPDSGLL R+E    +DPNEPLDKLLL
Sbjct: 242 VFFSISSNQPLLSQISLKKRQNFEFQRMGQALGIPDSGLLFRKEEFRPVDPNEPLDKLLL 301

Query: 303 NKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYIVAG 358
           NK+FR SFM FADSC AGE++HFFEEV+EHGKIP DD +RRIYMARHI+EK+IVAG
Sbjct: 302 NKRFRHSFMEFADSCYAGETLHFFEEVYEHGKIPEDDSIRRIYMARHIMEKFIVAG 357

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|22331342|ref|NP_189238.2| regulator of G-protein signaling 1 [Arabidopsis thaliana] gi|23297446|gb|AAN12971.1| unknown protein [Arabidopsis thaliana] gi|332643595|gb|AEE77116.1| regulator of G-protein signaling 1 [Arabidopsis thaliana]

 Score =  534 bits (1376), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 243/356 (68%), Positives = 301/356 (84%)

Query: 3   GSGCAVKGGCPTDYIALAIASLFFILLLARFILPFVVHKVPRTKSSGFWIPVIQVFASFN 62
            SGCA+ GGCP+DY+A+AI+ + F +LL+R +LP ++HK PRT SS FWIPVIQV +SFN
Sbjct: 2   ASGCALHGGCPSDYVAVAISVICFFVLLSRSVLPCLIHKAPRTNSSSFWIPVIQVISSFN 61

Query: 63  LLLSLVLSDNFLKFQRRRWWQSCYIWGVWIEGPLGFGLLMSCRIAQAFQLYYIFVRKHLP 122
           LL S+++S N L+F+ + WW+ CY+W VWIEGPLGFGLLMSCRI QAFQLY+IFV+K LP
Sbjct: 62  LLFSIMMSVNLLRFRTKHWWRYCYLWAVWIEGPLGFGLLMSCRITQAFQLYFIFVKKRLP 121

Query: 123 PIRSYVFLPLVLMPWLIAATFIQVMRPLNDRCHMRVHWIIPFLFLHVVYVASLVGFMAAI 182
           P++SY+FLPLVL+PW+  A  I   +PLND+CHM + W  P   LH +YV +L+ F  A+
Sbjct: 122 PVKSYIFLPLVLLPWIFGAAIIHATKPLNDKCHMGLQWTFPVAGLHALYVLALIAFTRAV 181

Query: 183 RHIEFRFDELRDLWQGIIVSASSIGLWVFAYLLNEIHDDISWLQVASRFLLLVMGGILVV 242
           RH+EFRFDELRDLW+GI+VSA+SI +WV A++LNEIH++ISWLQVASRF+LLV GGILVV
Sbjct: 182 RHVEFRFDELRDLWKGILVSATSIVIWVTAFVLNEIHEEISWLQVASRFVLLVTGGILVV 241

Query: 243 VFFSISSSEPLLSQISLRKREPKEFETMGQALGIPDSGLLLRREPTPVIDPNEPLDKLLL 302
           VFFSISS++PLLSQISL+KR+  EF+ MGQALGIPDSGLL R+E    +DPNEPLDKLLL
Sbjct: 242 VFFSISSNQPLLSQISLKKRQNFEFQRMGQALGIPDSGLLFRKEEFRPVDPNEPLDKLLL 301

Query: 303 NKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYIVAG 358
           NK+FR SFM FADSC AGE++HFFEEV+EHGKIP DD +RRIYMARHI+EK+IVAG
Sbjct: 302 NKRFRHSFMEFADSCYAGETLHFFEEVYEHGKIPEDDSIRRIYMARHIMEKFIVAG 357

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356569207|ref|XP_003552796.1| PREDICTED: uncharacterized protein LOC100801487 [Glycine max]

 Score =  533 bits (1372), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 252/354 (71%), Positives = 300/354 (84%)

Query: 6   CAVKGGCPTDYIALAIASLFFILLLARFILPFVVHKVPRTKSSGFWIPVIQVFASFNLLL 65
           C VKGGCP+DYIA+A++ L F +LL   I PF+VHKVPRTK SGFW+PVIQV ASFNLLL
Sbjct: 91  CTVKGGCPSDYIAIALSILSFTVLLLWSIFPFLVHKVPRTKGSGFWLPVIQVVASFNLLL 150

Query: 66  SLVLSDNFLKFQRRRWWQSCYIWGVWIEGPLGFGLLMSCRIAQAFQLYYIFVRKHLPPIR 125
           S+V+S+NFLK  +R W +SCY+WGVW+EGPLGFGLL+SCRI QA QLY+IFV++ LP IR
Sbjct: 151 SIVMSNNFLKMGKRHWLRSCYLWGVWVEGPLGFGLLLSCRITQASQLYFIFVKRRLPLIR 210

Query: 126 SYVFLPLVLMPWLIAATFIQVMRPLNDRCHMRVHWIIPFLFLHVVYVASLVGFMAAIRHI 185
           SY+FLPL+L+PW+ A   I  M+PL+ RCHM+  W IP + LH +Y+A LVG  AA+ HI
Sbjct: 211 SYIFLPLILLPWIAAGGVIHSMKPLSSRCHMKAQWTIPVVSLHSLYIAILVGVTAAVHHI 270

Query: 186 EFRFDELRDLWQGIIVSASSIGLWVFAYLLNEIHDDISWLQVASRFLLLVMGGILVVVFF 245
           EFRFDEL+DLW+GI+VSA SI +WV AY+LNEI+D+ISWL+VASRFLLLV+  ILVV FF
Sbjct: 271 EFRFDELKDLWRGILVSAVSIAVWVTAYILNEIYDNISWLEVASRFLLLVVASILVVAFF 330

Query: 246 SISSSEPLLSQISLRKREPKEFETMGQALGIPDSGLLLRREPTPVIDPNEPLDKLLLNKK 305
           SISSS+PLLSQISLR+RE +EF TM QALGIPDSG+L + EP   IDPNEPLDKLLLNK+
Sbjct: 331 SISSSQPLLSQISLRRRESREFRTMSQALGIPDSGVLAQSEPISRIDPNEPLDKLLLNKR 390

Query: 306 FRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYIVAGL 359
           FR SFMAFADSCLAGESVHFF+EV+E  KIP DD VRRIYMARHIIEKYI+AG+
Sbjct: 391 FRLSFMAFADSCLAGESVHFFDEVYELSKIPEDDCVRRIYMARHIIEKYIIAGV 444

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356540199|ref|XP_003538577.1| PREDICTED: uncharacterized protein LOC100813598 [Glycine max]

 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 251/353 (71%), Positives = 298/353 (84%)

Query: 6   CAVKGGCPTDYIALAIASLFFILLLARFILPFVVHKVPRTKSSGFWIPVIQVFASFNLLL 65
           CAVKGGCP+DYIA+A++ L   +LL   I PF+VHKVPRTK SGFW+PVIQV ASFNLLL
Sbjct: 4   CAVKGGCPSDYIAIALSILSITVLLLWSIFPFLVHKVPRTKGSGFWLPVIQVVASFNLLL 63

Query: 66  SLVLSDNFLKFQRRRWWQSCYIWGVWIEGPLGFGLLMSCRIAQAFQLYYIFVRKHLPPIR 125
           S+V+S+NFLK  +R W +SCY+WGVW+EGPLGFGLL+SCRI QA QLY+IFV++ LP IR
Sbjct: 64  SIVMSNNFLKMGKRHWLRSCYLWGVWVEGPLGFGLLLSCRITQASQLYFIFVKRRLPLIR 123

Query: 126 SYVFLPLVLMPWLIAATFIQVMRPLNDRCHMRVHWIIPFLFLHVVYVASLVGFMAAIRHI 185
           SY+FLPL+L+PW+ A   I  M+PL+ RCHM+  W IP + LH +Y+A LVG  AA+ HI
Sbjct: 124 SYIFLPLILLPWIAAGGVIHSMKPLSSRCHMKAQWTIPVVCLHSLYIAILVGVTAAVHHI 183

Query: 186 EFRFDELRDLWQGIIVSASSIGLWVFAYLLNEIHDDISWLQVASRFLLLVMGGILVVVFF 245
           EFRFDEL+DLW+GI+VS  SI +WV AY+LNEI+D+ISW++VASRFLLLV+  ILVV FF
Sbjct: 184 EFRFDELKDLWRGILVSVVSIAVWVTAYILNEIYDNISWIEVASRFLLLVVASILVVAFF 243

Query: 246 SISSSEPLLSQISLRKREPKEFETMGQALGIPDSGLLLRREPTPVIDPNEPLDKLLLNKK 305
           SISSS+PLLSQISLR+RE +EF TM QALGIPDSG+L   EP   IDPNEPLDKLLLNK+
Sbjct: 244 SISSSQPLLSQISLRRRESREFRTMSQALGIPDSGVLAESEPISRIDPNEPLDKLLLNKR 303

Query: 306 FRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYIVAG 358
           FRQSFMAFADSCLAGESVHFF+EV+E  KIP DD V+RIYMARHIIEKYIVAG
Sbjct: 304 FRQSFMAFADSCLAGESVHFFDEVYELSKIPEDDCVKRIYMARHIIEKYIVAG 356

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449435446|ref|XP_004135506.1| PREDICTED: uncharacterized protein LOC101218119 [Cucumis sativus] gi|449512982|ref|XP_004164196.1| PREDICTED: uncharacterized protein LOC101224641 [Cucumis sativus]

 Score =  514 bits (1324), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 244/353 (69%), Positives = 299/353 (84%), Gaps = 1/353 (0%)

Query: 6   CAVKGGCPTDYIALAIASLFFILLLARFILPFVVHKVPRTKSSGFWIPVIQVFASFNLLL 65
           CAV GGCP+DYIA+  A++   LL+ R+ILP+V++K+P  K S FWIPVIQVFAS NLLL
Sbjct: 4   CAVDGGCPSDYIAIVFAAVCLALLIFRWILPYVMYKIPLPKGSRFWIPVIQVFASLNLLL 63

Query: 66  SLVLSDNFLKFQRRRWWQSCYIWGVWIEGPLGFGLLMSCRIAQAFQLYYIFVRKHLPPIR 125
           S+V+S +F KF+R++W +SCYIW VW+EGPLGFGLL+S RI Q FQLYYIFV++ LPPI+
Sbjct: 64  SIVISVSFFKFKRQKW-RSCYIWAVWVEGPLGFGLLLSSRITQTFQLYYIFVKRRLPPIK 122

Query: 126 SYVFLPLVLMPWLIAATFIQVMRPLNDRCHMRVHWIIPFLFLHVVYVASLVGFMAAIRHI 185
           +++FLPL+L+PW+  A FI V +PLN RCHM   WIIP + LH++YVA+L+ F  A+RHI
Sbjct: 123 THIFLPLILLPWISGAAFINVKKPLNYRCHMGPRWIIPIMTLHILYVATLIVFTWAVRHI 182

Query: 186 EFRFDELRDLWQGIIVSASSIGLWVFAYLLNEIHDDISWLQVASRFLLLVMGGILVVVFF 245
           EFRFDELRDLW+GIIVSA SIG+WV AY+ NEIH++I  LQVASRFLLLV   ILV+ FF
Sbjct: 183 EFRFDELRDLWKGIIVSAFSIGVWVSAYITNEIHEEILGLQVASRFLLLVTASILVLTFF 242

Query: 246 SISSSEPLLSQISLRKREPKEFETMGQALGIPDSGLLLRREPTPVIDPNEPLDKLLLNKK 305
           S SSS+PLLSQISLRKRE  E+++MG ALGIPDSGLLL+REP  VIDPNEPL+KLLLNK+
Sbjct: 243 STSSSQPLLSQISLRKREALEYDSMGHALGIPDSGLLLQREPETVIDPNEPLEKLLLNKR 302

Query: 306 FRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYIVAG 358
           FR+SFMAFADSCLAGE+VHF++EVHE GK+P+DD VRRIYMARHII+ YI  G
Sbjct: 303 FRRSFMAFADSCLAGENVHFYDEVHELGKLPLDDPVRRIYMARHIIDNYITPG 355

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357463151|ref|XP_003601857.1| hypothetical protein MTR_3g086170 [Medicago truncatula] gi|355490905|gb|AES72108.1| hypothetical protein MTR_3g086170 [Medicago truncatula]

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 254/368 (69%), Positives = 300/368 (81%), Gaps = 10/368 (2%)

Query: 1   MAGSGCAVKGGCPTDYIALAIASLFFILLLARFILPFVVHKVPRTKSSGFWIPVIQVFAS 60
           MA   CAVKGGCPTDY+A+ ++ L FILLL   I PF+VHKVPRTK SGFWIPVIQV AS
Sbjct: 1   MANFKCAVKGGCPTDYVAVTVSILSFILLLIWSIFPFIVHKVPRTKGSGFWIPVIQVVAS 60

Query: 61  FNLLLSLVLSDNFLKFQRRRWWQSCYIWGVWIEGPLGFGLLMSCRIAQAFQLYYIFVRKH 120
           FNLLLS+++S NF KF++  WWQSCY+W VW EGPLGFGLL+S RI QAFQLY+IFV++ 
Sbjct: 61  FNLLLSIMMSHNFFKFEKSHWWQSCYLWAVWGEGPLGFGLLLSSRITQAFQLYFIFVKRR 120

Query: 121 LPPIRSYVFLPLVLMPWLIAATFIQVMRPLNDRCHMRVHWIIPFLFLHVVYVASLVGFMA 180
           LP IRS++ +PL+L+PW+I A  I + +PL++RCHM V W IP + LH +YVA+LVG  A
Sbjct: 121 LPLIRSFLLIPLILLPWIIGAAVIHIKKPLSNRCHMSVQWTIPVVCLHALYVATLVGVTA 180

Query: 181 AIRHIEFRFDELRDLWQGIIVSASSIGLWVFAYLLNEIHDDISWLQVASRFLLLVM---- 236
           A+ HIEFRFDELRDLW+GI+VS+ S+ +WV AY+LNEIHD+ISWLQV SRFLLLV+    
Sbjct: 181 AVHHIEFRFDELRDLWRGILVSSVSVAVWVTAYILNEIHDNISWLQVVSRFLLLVLVCFP 240

Query: 237 ------GGILVVVFFSISSSEPLLSQISLRKREPKEFETMGQALGIPDSGLLLRREPTPV 290
                   ILV+ FFSISSS+PLLSQISLR+RE +EF TMGQALGIPDSG+L + EP   
Sbjct: 241 TAFFFFASILVLAFFSISSSQPLLSQISLRRRESREFRTMGQALGIPDSGVLTQSEPISR 300

Query: 291 IDPNEPLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHI 350
           +DPNEPLDKLLLNKKFRQSFM FADSCLAGESVHFF+EVHE  KI   D VRRIYMARHI
Sbjct: 301 VDPNEPLDKLLLNKKFRQSFMGFADSCLAGESVHFFDEVHELSKISEHDCVRRIYMARHI 360

Query: 351 IEKYIVAG 358
           IEKY+VAG
Sbjct: 361 IEKYMVAG 368

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255547936|ref|XP_002515025.1| signal transducer, putative [Ricinus communis] gi|223546076|gb|EEF47579.1| signal transducer, putative [Ricinus communis]

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 225/291 (77%), Positives = 259/291 (89%)

Query: 68  VLSDNFLKFQRRRWWQSCYIWGVWIEGPLGFGLLMSCRIAQAFQLYYIFVRKHLPPIRSY 127
           ++S N LKF+ R WWQSCY+W VW EGPLGFGLL+SCRIAQAFQLY+IFV++ LPPIRSY
Sbjct: 1   MMSANVLKFRERHWWQSCYVWAVWFEGPLGFGLLLSCRIAQAFQLYHIFVKRRLPPIRSY 60

Query: 128 VFLPLVLMPWLIAATFIQVMRPLNDRCHMRVHWIIPFLFLHVVYVASLVGFMAAIRHIEF 187
           +FLP++L+PW+  A FI V +PLN RCHM  HWIIP + LH  ++A+LVGF AAIRHIEF
Sbjct: 61  IFLPVILLPWIAGAAFIHVKKPLNARCHMETHWIIPVICLHASFIAALVGFTAAIRHIEF 120

Query: 188 RFDELRDLWQGIIVSASSIGLWVFAYLLNEIHDDISWLQVASRFLLLVMGGILVVVFFSI 247
           RFDEL+DLW+GI+VSASSIGLWV AY+LNE+HDD+SWLQV SRFLLLV   ILV+ FFSI
Sbjct: 121 RFDELKDLWKGILVSASSIGLWVAAYILNEVHDDVSWLQVLSRFLLLVTASILVLAFFSI 180

Query: 248 SSSEPLLSQISLRKREPKEFETMGQALGIPDSGLLLRREPTPVIDPNEPLDKLLLNKKFR 307
           SSSEPLLSQISLRKREP EFETMGQALGIPDSG+LL+R+P PV+DPNEPLDKLL +K+FR
Sbjct: 181 SSSEPLLSQISLRKREPLEFETMGQALGIPDSGVLLQRDPAPVVDPNEPLDKLLQDKRFR 240

Query: 308 QSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYIVAG 358
           QSFMAFADSCLAGE+VHF+ EVHE GKIP+DD VRRIYMARHIIEKYIVAG
Sbjct: 241 QSFMAFADSCLAGENVHFYNEVHERGKIPLDDTVRRIYMARHIIEKYIVAG 291

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	359
TAIR|locus:2092180	459	RGS1 "AT3G26090" [Arabidopsis	0.988	0.773	0.560	2.9e-110

TAIR|locus:2092180 RGS1 "AT3G26090" [Arabidopsis thaliana (taxid:3702)]

 Score = 1089 (388.4 bits), Expect = 2.9e-110, P = 2.9e-110
 Identities = 199/355 (56%), Positives = 242/355 (68%)

Query:     4 SGCAVKGGCPTDYXXXXXXXXXXXXXXXXXXXXXVVHKVPRTKSSGFWIPVIQXXXXXXX 63
             SGCA+ GGCP+DY                     ++HK PRT SS FWIPVIQ       
Sbjct:     3 SGCALHGGCPSDYVAVAISVICFFVLLSRSVLPCLIHKAPRTNSSSFWIPVIQVISSFNL 62

Query:    64 XXXXXXXXXXXKFQRRRWWQSCYIWGVWIEGPLGFGLLMSCRIAQAFQLYYIFVRKHLPP 123
                        +F+ + WW+ CY+W VWIEGPLGFGLLMSCRI QAFQLY+IFV+K LPP
Sbjct:    63 LFSIMMSVNLLRFRTKHWWRYCYLWAVWIEGPLGFGLLMSCRITQAFQLYFIFVKKRLPP 122

Query:   124 IRSYVFLPLVLMPWLIAATFIQVMRPLNDRCHMRVHWIIPFLFLHVVYVASLVGFMAAIR 183
             ++SY+FLPLVL+PW+  A  I   +PLND+CHM + W  P   LH +YV +L+ F  A+R
Sbjct:   123 VKSYIFLPLVLLPWIFGAAIIHATKPLNDKCHMGLQWTFPVAGLHALYVLALIAFTRAVR 182

Query:   184 HIEFRFDELRDLWQGIIVSASSIGLWVFAYLLNEIHDDISWLQVASRXXXXXXXXXXXXX 243
             H+EFRFDELRDLW+GI+VSA+SI +WV A++LNEIH++ISWLQVASR             
Sbjct:   183 HVEFRFDELRDLWKGILVSATSIVIWVTAFVLNEIHEEISWLQVASRFVLLVTGGILVVV 242

Query:   244 XXXXXXXEPLLSQISLRKREPKEFETMGQALGIPDSGLLLRREPTPVIDPNEPLDKLLLN 303
                    +PLLSQISL+KR+  EF+ MGQALGIPDSGLL R+E    +DPNEPLDKLLLN
Sbjct:   243 FFSISSNQPLLSQISLKKRQNFEFQRMGQALGIPDSGLLFRKEEFRPVDPNEPLDKLLLN 302

Query:   304 KKFRQSFMAFADSCLAGESXXXXXXXXXXGKIPVDDHVRRIYMARHIIEKYIVAG 358
             K+FR SFM FADSC AGE+          GKIP DD +RRIYMARHI+EK+IVAG
Sbjct:   303 KRFRHSFMEFADSCYAGETLHFFEEVYEHGKIPEDDSIRRIYMARHIMEKFIVAG 357


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.329   0.144   0.475    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      359       290   0.00089  115 3  11 22  0.40    33
                                                     33  0.43    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  618 (66 KB)
  Total size of DFA:  235 KB (2125 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  19.43u 0.08s 19.51t   Elapsed:  00:00:02
  Total cpu time:  19.43u 0.08s 19.51t   Elapsed:  00:00:02
  Start:  Sat May 11 00:13:37 2013   End:  Sat May 11 00:13:39 2013

GO:0005737 "cytoplasm" evidence=IBA

GO:0038032 "termination of G-protein coupled receptor signaling pathway" evidence=IEA

GO:0005096 "GTPase activator activity" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0042127 "regulation of cell proliferation" evidence=IMP

GO:0043547 "positive regulation of GTPase activity" evidence=IDA

GO:0009749 "response to glucose stimulus" evidence=RCA;IMP

GO:0005634 "nucleus" evidence=IDA

GO:0009414 "response to water deprivation" evidence=RCA;IMP

GO:0009737 "response to abscisic acid stimulus" evidence=IMP

GO:0004930 "G-protein coupled receptor activity" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0010182 "sugar mediated signaling pathway" evidence=IMP

GO:0007165 "signal transduction" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0010008 "endosome membrane" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8H1F2	RGS1_ARATH	No assigned EC number	0.6825	0.9916	0.7755	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00035126001	SubName- Full=Chromosome chr1 scaffold_75, whole genome shotgun sequence; (466 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00032290001	SubName- Full=Chromosome chr4 scaffold_6, whole genome shotgun sequence; (370 aa)					•		•		0.821
	GSVIVG00020099001	SubName- Full=Chromosome chr5 scaffold_2, whole genome shotgun sequence; (105 aa)							•		0.457

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	359
cd08732	139	cd08732, RGS-like_4, Uncharacterized Regulator of	5e-14
smart00315	118	smart00315, RGS, Regulator of G protein signalling	3e-07

>gnl|CDD|188687 cd08732, RGS-like_4, Uncharacterized Regulator of G protein Signaling (RGS) domain subfamily, child 4

 Score = 67.9 bits (166), Expect = 5e-14
 Identities = 18/75 (24%), Positives = 23/75 (30%), Gaps = 9/75 (12%)

Query: 293 PNEPLDKLLLNKKFRQSFMAFADSCL---------AGESVHFFEEVHEHGKIPVDDHVRR 343
             EP    +        FM   +S            GE   F E+V E   I   D +  
Sbjct: 1   DLEPQKLFVSTIDDLDDFMEIEESIDDIILDPGIEHGEDDDFDEQVEELRYILDTDQILL 60

Query: 344 IYMARHIIEKYIVAG 358
               RHI+  YI   
Sbjct: 61  KDQWRHIMNTYIHHD 75

These uncharacterized RGS-like domains consists largely of hypothetical proteins. The RGS domain is an essential part of the Regulator of G-protein Signaling (RGS) protein family, a diverse group of multifunctional proteins that regulate cellular signaling events downstream of G-protein coupled receptors (GPCRs). RGS proteins play critical regulatory role as GTPase activating proteins (GAPs) of the heterotrimeric G-protein G-alpha-subunits. RGS proteins play critical regulatory role as GTPase activating proteins (GAPs) of the heterotrimeric G-protein G-alpha-subunits. RGS proteins regulate many aspects of embryonic development such as glial differentiation, embryonic axis formation, skeletal and muscle development, cell migration during early embryogenesis, as well as apoptosis, cell proliferation, and modulation of cardiac development. Several RGS proteins can fine-tune immune responses, while others play an important role in neuronal signal modulation. Some RGS proteins are the principal elements needed for proper vision. Length = 139

>gnl|CDD|214613 smart00315, RGS, Regulator of G protein signalling domain

 Score = 48.4 bits (116), Expect = 3e-07
 Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 2/60 (3%)

Query: 296 PLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYI 355
            L+ LL +   R  F  F +S  + E++ F+  V E  K   D+   RI  AR I +K++
Sbjct: 1   SLESLLSDPIGRLLFREFLESEFSEENLEFWLAVEEFKKAEDDEE--RIAKAREIYDKFL 58

RGS family members are GTPase-activating proteins for heterotrimeric G-protein alpha-subunits. Length = 118

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	359
PF00615	118	RGS: Regulator of G protein signaling domain; Inte	98.18
smart00315	118	RGS Regulator of G protein signalling domain. RGS	97.98
PF00003	238	7tm_3: 7 transmembrane sweet-taste receptor of 3 G	95.61

>PF00615 RGS: Regulator of G protein signaling domain; InterPro: IPR000342 RGS (Regulator of G Protein Signalling) proteins are multi-functional, GTPase-accelerating proteins that promote GTP hydrolysis by the alpha subunit of heterotrimeric G proteins, thereby inactivating the G protein and rapidly switching off G protein-coupled receptor signalling pathways []

Probab=98.18  E-value=2.7e-06  Score=62.30  Aligned_cols=61  Identities=25%  Similarity=0.396  Sum_probs=53.8

Q ss_pred             HHHHhhchhHHHHHHhhhhhcccCccchhhHhhhhhCCCCccchhHHHHHHHHHHHHHHHhCC
Q 018201          297 LDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYIVAGL  359 (359)
Q Consensus       297 LdkLLlnkrFRqSfmaFADSclAGE~vHFy~EV~E~~Kip~~d~vrRIYMArHIieKyivaGa  359 (359)
                      +|++|.|+..+..|+.|...+.++|.+.||.||.+-.+.+.++  ++-.+|++|.++|+..|+
T Consensus         2 ~~~il~~~~~~~~F~~Fl~~~~~~~~l~F~~~v~~~~~~~~~~--~~~~~a~~I~~~fi~~~s   62 (118)
T PF00615_consen    2 FEKILEDPEGLELFKEFLEKENCEENLQFWLEVEEFKSSESEE--QRKKLAQQIYNKFISPGS   62 (118)
T ss_dssp             HHHHHHSHHHHHHHHHHHHHTTTTHHHHHHHHHHHHHTSCSHH--HHHHHHHHHHHHHTSTTS
T ss_pred             HHHHHCChHHHHHHHHHHhHCCCHHHHHHHHHHHHHHhhcchh--hHHHHHHHHHHHHhcccc
Confidence            7999999999999999999999999999999999999984443  444559999999997764

Upon activation by GPCRs, heterotrimeric G proteins exchange GDP for GTP, are released from the receptor, and dissociate into free, active GTP-bound alpha subunit and beta-gamma dimer, both of which activate downstream effectors. The response is terminated upon GTP hydrolysis by the alpha subunit (IPR001019 from INTERPRO), which can then bind the beta-gamma dimer (IPR001632 from INTERPRO, IPR001770 from INTERPRO) and the receptor. RGS proteins markedly reduce the lifespan of GTP-bound alpha subunits by stabilising the G protein transition state. All RGS proteins contain an 'RGS-box' (or RGS domain), which is required for activity. Some small RGS proteins such as RGS1 and RGS4 are comprised of little more than an RGS domain, while others also contain additional domains that confer further functionality []. RGS domains can be found in conjunction with a variety of domains, including: DEP for membrane targeting (IPR000591 from INTERPRO), PDZ for binding to GPCRs (IPR001478 from INTERPRO), PTB for phosphotyrosine-binding (IPR006020 from INTERPRO), RBD for Ras-binding (IPR003116 from INTERPRO), GoLoco for guanine nucleotide inhibitor activity (IPR003109 from INTERPRO), PX for phosphatidylinositol-binding (IPR001683 from INTERPRO), PXA that is associated with PX (IPR003114 from INTERPRO), PH for stimulating guanine nucleotide exchange (IPR001849 from INTERPRO), and GGL (G protein gamma subunit-like) for binding G protein beta subunits (IPR001770 from INTERPRO) []. Those RGS proteins that contain GGL domains can interact with G protein beta subunits to form novel dimers that prevent G protein gamma subunit binding and G protein alpha subunit association, thereby preventing heterotrimer formation.; GO: 0004871 signal transducer activity; PDB: 2BCJ_A 3PSC_A 3PVU_A 1YM7_B 3PVW_A 1OMW_A 2EBZ_A 2BV1_B 2GTP_D 1CMZ_A ....

>smart00315 RGS Regulator of G protein signalling domain

Probab=97.98  E-value=1e-05  Score=60.28  Aligned_cols=62  Identities=31%  Similarity=0.403  Sum_probs=56.2

Q ss_pred             hHHHHhhchhHHHHHHhhhhhcccCccchhhHhhhhhCCCCccchhHHHHHHHHHHHHHHHhCC
Q 018201          296 PLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYIVAGL  359 (359)
Q Consensus       296 PLdkLLlnkrFRqSfmaFADSclAGE~vHFy~EV~E~~Kip~~d~vrRIYMArHIieKyivaGa  359 (359)
                      .|+.+|.|+..|+.|+.|.+.....|.+.|+++|.+.-+++.+  -+|.-+|+.|.+|||..|+
T Consensus         1 ~l~~il~d~~~~~~F~~fl~~~~~~e~l~F~~~v~~~~~~~~~--~~~~~~a~~I~~~yi~~~s   62 (118)
T smart00315        1 SLESLLSDPIGRLLFREFLESEFSEENLEFWLAVEEFKKAEDD--EERIAKAREIYDKFLSPNA   62 (118)
T ss_pred             CHHHHhcChHHHHHHHHHHHHhcchHhHHHHHHHHHHHhcCCH--HHHHHHHHHHHHHHhCCCC
Confidence            4789999999999999999999999999999999999988875  4578899999999998774

RGS family members are GTPase-activating proteins for heterotrimeric G-protein alpha-subunits.

>PF00003 7tm_3: 7 transmembrane sweet-taste receptor of 3 GCPR; InterPro: IPR017978 G-protein-coupled receptors, GPCRs, constitute a vast protein family that encompasses a wide range of functions (including various autocrine, paracrine and endocrine processes)

Probab=95.61  E-value=0.034  Score=47.19  Aligned_cols=166  Identities=21%  Similarity=0.271  Sum_probs=98.9

Q ss_pred             eccCCCCCCceeehHhHHHHHHHHHHHHHhhhchhhhchhhhhhhhHhhhhhhcccccchhhhhhhHhhhhhhhhheecc
Q 018201           40 HKVPRTKSSGFWIPVIQVFASFNLLLSLVLSDNFLKFQRRRWWQSCYIWGVWIEGPLGFGLLMSCRIAQAFQLYYIFVRK  119 (359)
Q Consensus        40 hk~prt~~s~fwipvIQv~aSfnlL~Si~mS~N~lkf~~~hwwq~Cylw~vW~eGPlGFGlLlScrI~QAfqLy~IFVkr  119 (359)
                      .|.|--++|+...-.+-.++.+-+..|..+..  .+-+.    ..|.+- .|. -++||.+..++=+++++|+|-+|-++
T Consensus        17 r~~~~i~~s~~~l~~~lL~G~~l~~~~~~~~~--~~~s~----~~C~~r-~~~-~~l~f~l~~~~ll~K~~ri~~if~~~   88 (238)
T PF00003_consen   17 RNTPIIRASSPELLYILLLGCLLLYSSVFLFL--LPPSD----ILCTLR-RWL-FSLGFTLIFSALLAKTWRIYRIFRNP   88 (238)
T ss_pred             cCCCceecCCHhHHHHHHHHHHHHHHHHHHhc--cCcCC----cEEEEe-eee-eeeehHhhhhHHHHhhhheeeeeccC
Confidence            45677777877655565666555544444322  22222    237754 666 56999999999999999999999865


Q ss_pred             cCCC--cch-----hhh-hhHHHHHHHhhhhhhhhccCCc-------------cccc-ceeEeeehhhhHHHHHHHHHHH
Q 018201          120 HLPP--IRS-----YVF-LPLVLMPWLIAATFIQVMRPLN-------------DRCH-MRVHWIIPFLFLHVVYVASLVG  177 (359)
Q Consensus       120 rLPp--irs-----y~f-LPlillPWi~gaa~ih~~kpl~-------------~rCh-m~~~W~ipv~~Lhalyva~Lv~  177 (359)
                      +...  .++     +.+ +.+++.+-+.-+. -....|..             ..|+ ....|..-.....++....-..
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~v~~ii~~~-w~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~y~~~Ll~~~~~  167 (238)
T PF00003_consen   89 SRKRRRLISSNRSLLLLVLLLVLVQVIILII-WLILDPPTPVSDIDISSNEIYLSCSSNSNIWLILSLGYNGLLLLIGFF  167 (238)
T ss_pred             CCCCcccccCCcchhhheeeeeeehhhhhhh-hhhcccccccccccccceEEEEEecCCccchHHHHHHHHHHHHHHHHH
Confidence            5522  232     211 1222222222211 12233332             2895 3344444444444444555556


Q ss_pred             HHHhhheeeeechhHHHHHHHHHHHHHHHHHHHHHHH
Q 018201          178 FMAAIRHIEFRFDELRDLWQGIIVSASSIGLWVFAYL  214 (359)
Q Consensus       178 ~t~avrHieFrFdElkdLwkgilvsa~si~vWv~ayi  214 (359)
                      .+++.||++-.|+|-|.+=-.+.+......+|+..+.
T Consensus       168 la~~~R~~~~~~nEa~~I~~~~~~~~~~~~~~~~~~~  204 (238)
T PF00003_consen  168 LAFKTRNVPSNFNEARYIAFAIYNITIIWIIFIPLYF  204 (238)
T ss_pred             HHHhhCCCCcccchhhhHhHhHHHHHHHHHHhhhhee
Confidence            7789999999999999876666666666666666554

They show considerable diversity at the sequence level, on the basis of which they can be separated into distinct groups. We use the term clan to describe the GPCRs, as they embrace a group of families for which there are indications of evolutionary relationship, but between which there is no statistically significant similarity in sequence []. The currently known clan members include the rhodopsin-like GPCRs, the secretin-like GPCRs, the cAMP receptors, the fungal mating pheromone receptors, and the metabotropic glutamate receptor family. There is a specialised database for GPCRs (http://www.gpcr.org/7tm/). GPCR family 3 receptors (also known as family C) are structurally similar to other GPCRs, but do not show any significant sequence similarity and thus represent a distinct group. Structurally they are composed of four elements; an N-terminal signal sequence; a large hydrophilic extracellular agonist-binding region containing several conserved cysteine residues which could be involved in disulphide bonds; a shorter region containing seven transmembrane domains; and a C-terminal cytoplasmic domain of variable length []. Family 3 members include the metabotropic glutamate receptors, the extracellular calcium-sensing receptors, the gamma-amino-butyric acid (GABA) type B receptors, and the vomeronasal type-2 receptors [, , , ]. As these receptors regulate many important physiological processes they are potentially promising targets for drug development. This entry represents the C-terminal region of family 3 GPCR receptor proteins, which contains the seven transmembrane region. The seven TM regions assemble in such a way as to produce a docking pocket into which such molecules as cyclamate and lactisole have been found to bind and consequently confer the taste of sweetness []. ; GO: 0004930 G-protein coupled receptor activity, 0007186 G-protein coupled receptor protein signaling pathway, 0016021 integral to membrane

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	359
2jnu_A	154	RGS14, regulator of G-protein signaling 14; regula	1e-10
2ebz_A	155	RGS12, regulator of G-protein signaling 12; RGS do	8e-09
2a72_A	146	Regulator of G-protein signalling 7; human RGS7, r	1e-08
2af0_A	146	Regulator of G-protein signaling 2; helix, structu	2e-08
2crp_A	150	RGS5, regulator of G-protein signaling 5; RGS doma	2e-08
1agr_E	205	RGS4; GI-alpha-1, hydrolase, signal transduction,	2e-08
2ihd_A	155	RGS8, regulator of G-protein signaling 8; signalin	5e-08
2ihb_B	153	Regulator of G-protein signalling 10, guanine nucl	9e-08
2bv1_A	145	Regulator of G-protein signalling 1; RGS1, RGS, st	9e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-08
1cmz_A	152	Protein (GAIP (G-alpha interacting) protein); RGS,	9e-08
2dlv_A	140	RGS18, regulator of G-protein signaling 18; RGS do	1e-07
2dlr_A	149	RGS10, regulator of G-protein signaling 10; RGS do	1e-07
1zv4_X	158	RGS17, regulator of G-protein signaling 17; human	5e-07
3c7l_A	137	Regulator of G-protein signaling 16; RGS, RGS16, G	8e-07
2jm5_A	151	RGS18, regulator of G-protein signaling 18; signal	8e-07
2pbi_A	424	Regulator of G-protein signaling 9; helix WRAP, RG	4e-06
1fqi_A	147	RGS9, regulator of G-protein signaling 9; phototra	7e-06
1dk8_A	147	Axin; alpha-helix, PI-helix, signaling protein; HE	1e-05
2oj4_A	127	RGS3, regulator of G-protein signaling 3, RGP3; RG	2e-05

>2jnu_A RGS14, regulator of G-protein signaling 14; regulator of G-protein signalling domain, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens} Length = 154

 Score = 58.1 bits (140), Expect = 1e-10
 Identities = 13/64 (20%), Positives = 28/64 (43%)

Query: 295 EPLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKY 354
              ++LL +      F  F     + E+V F++      +IP  D  +    AR+I +++
Sbjct: 13  LSFERLLQDPLGLAYFTEFLKKEFSAENVTFWKACERFQQIPASDTQQLAQEARNIYQEF 72

Query: 355 IVAG 358
           + + 
Sbjct: 73  LSSQ 76

>2ebz_A RGS12, regulator of G-protein signaling 12; RGS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 155

 Score = 53.2 bits (127), Expect = 8e-09
 Identities = 13/64 (20%), Positives = 26/64 (40%)

Query: 295 EPLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKY 354
              ++LL +    + F  F     + E++ F++       +P  D     Y AR I  K+
Sbjct: 17  VSFERLLQDPVGVRYFSDFLRKEFSEENILFWQACEYFNHVPAHDKKELSYRAREIFSKF 76

Query: 355 IVAG 358
           + + 
Sbjct: 77  LCSK 80

>2a72_A Regulator of G-protein signalling 7; human RGS7, regulator of G-protein signaling 7, GTPase-activ proteins (GAP), structural genomics; 2.00A {Homo sapiens} PDB: 2d9j_A 2es0_A Length = 146

 Score = 52.7 bits (126), Expect = 1e-08
 Identities = 16/76 (21%), Positives = 35/76 (46%), Gaps = 5/76 (6%)

Query: 285 REPTP--VIDPNEPLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVR 342
           +EP+   V      +D+ L +   R+ F+ F +S  + E++ F+  V +  K P+     
Sbjct: 3   KEPSQQRVKRWGFGMDEALKDPVGREQFLKFLESEFSSENLRFWLAVEDLKKRPIK---E 59

Query: 343 RIYMARHIIEKYIVAG 358
                + I ++++  G
Sbjct: 60  VPSRVQEIWQEFLAPG 75

>2af0_A Regulator of G-protein signaling 2; helix, structural genomics, structural genomics consortium, SGC, signaling protein; 2.30A {Homo sapiens} PDB: 2v4z_B* Length = 146

 Score = 51.9 bits (124), Expect = 2e-08
 Identities = 18/75 (24%), Positives = 30/75 (40%), Gaps = 4/75 (5%)

Query: 286 EPTP--VIDPNEPLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRR 343
           +P+P      +E  D+LL +K    +F AF  S    E++ F+    +  K       + 
Sbjct: 14  KPSPEEAQLWSEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTK--SPQKL 71

Query: 344 IYMARHIIEKYIVAG 358
              AR I   +I   
Sbjct: 72  SSKARKIYTDFIEKE 86

>2crp_A RGS5, regulator of G-protein signaling 5; RGS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 150

 Score = 51.9 bits (124), Expect = 2e-08
 Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 284 RREPTPVIDPNEPLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRR 343
           +      +   + LDKLL N     SF +F  S  + E++ F+    ++ KI      + 
Sbjct: 16  KTSLDEALQWRDSLDKLLQNNYGLASFKSFLKSEFSEENLEFWIACEDYKKIK--SPAKM 73

Query: 344 IYMARHIIEKYIVAG 358
              A+ I E++I   
Sbjct: 74  AEKAKQIYEEFIQTE 88

>1agr_E RGS4; GI-alpha-1, hydrolase, signal transduction, complex (signal transduction/regulator), GTP-binding, GTPase activating protein; HET: GDP CIT; 2.80A {Rattus norvegicus} SCOP: a.91.1.1 PDB: 1ezt_A 1ezy_A Length = 205

 Score = 52.9 bits (126), Expect = 2e-08
 Identities = 18/104 (17%), Positives = 36/104 (34%), Gaps = 2/104 (1%)

Query: 255 SQISLRKREPKEFETMGQALGIPDSGLLLRREPTPVIDPNEPLDKLLLNKKFRQSFMAFA 314
            ++    ++    E               R     V    E L+ L+ ++    +F AF 
Sbjct: 21  HRLGFLLQKSDSCEHSSSHSKKDKVVTCQRVSQEEVKKWAESLENLINHECGLAAFKAFL 80

Query: 315 DSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYIVAG 358
            S  + E++ F+    E+ KI      +    A+ I  ++I   
Sbjct: 81  KSEYSEENIDFWISCEEYKKIK--SPSKLSPKAKKIYNEFISVQ 122

>2ihd_A RGS8, regulator of G-protein signaling 8; signaling protein, structural genomics, structura genomics consortium, SGC, signaling protein; 1.70A {Homo sapiens} PDB: 2ode_B* 2bt2_A Length = 155

 Score = 50.8 bits (121), Expect = 5e-08
 Identities = 15/75 (20%), Positives = 28/75 (37%), Gaps = 2/75 (2%)

Query: 284 RREPTPVIDPNEPLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRR 343
           R          +  D LL +K    +F AF  +  + E++ F+    E  K       + 
Sbjct: 26  RLSTEEATRWADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTR--STAKL 83

Query: 344 IYMARHIIEKYIVAG 358
           +  A  I E+++   
Sbjct: 84  VSKAHRIFEEFVDVQ 98

>2ihb_B Regulator of G-protein signalling 10, guanine nucleotide-binding protein G(K) subunit A; RGS, heterotrimeric G protein, signall complex; HET: GDP; 2.71A {Homo sapiens} PDB: 2i59_A Length = 153

 Score = 50.0 bits (119), Expect = 9e-08
 Identities = 11/75 (14%), Positives = 27/75 (36%), Gaps = 2/75 (2%)

Query: 284 RREPTPVIDPNEPLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRR 343
            +           L+ LL + +  + F  F     + E+V F+    +  K+     ++ 
Sbjct: 22  HQSLKSTAKWAASLENLLEDPEGVKRFREFLKKEFSEENVLFWLACEDFKKMQDKTQMQE 81

Query: 344 IYMARHIIEKYIVAG 358
              A+ I   ++ + 
Sbjct: 82  --KAKEIYMTFLSSK 94

>2bv1_A Regulator of G-protein signalling 1; RGS1, RGS, structural genomics, struct genomics consortium, B-cell activation, phosphorylation; 2.0A {Homo sapiens} PDB: 2gtp_C* Length = 145

 Score = 50.0 bits (119), Expect = 9e-08
 Identities = 17/84 (20%), Positives = 35/84 (41%), Gaps = 3/84 (3%)

Query: 275 GIPDSGLLLRREPTPVIDPNEPLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGK 334
           G+  S          V+  ++ L+KLL N+  +  F +F  S  + E++ F+    ++ K
Sbjct: 4   GMKSSKSKDVLSAAEVMQWSQSLEKLLANQTGQNVFGSFLKSEFSEENIEFWLACEDYKK 63

Query: 335 IPVDDHVRRIYMARHIIEKYIVAG 358
              D        A  I + ++ + 
Sbjct: 64  TESDL---LPCKAEEIYKAFVHSD 84

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 52.9 bits (126), Expect = 9e-08
 Identities = 51/383 (13%), Positives = 100/383 (26%), Gaps = 116/383 (30%)

Query: 1   MAGSGCAVKGGCPTDYIALAIASLFFILLLARFILPFVVHKVPRTKSSGFWIPVIQVFAS 60
           + GSG             +A+       +  +    F +          FW+ +    + 
Sbjct: 158 VLGSGKTW----------VALDVCLSYKVQCKM--DFKI----------FWLNLKNCNSP 195

Query: 61  FNLLLSLVLSDNFLKFQRRRWWQSCYIWGVWIEGPLGFGLLMSCRIAQAFQ-----LYYI 115
             +L  L               +  Y     I+         S  I          L  +
Sbjct: 196 ETVLEML--------------QKLLYQ----IDPNWTSRSDHSSNIKLRIHSIQAELRRL 237

Query: 116 FVRKHLPPIRSYVFLPLVLMPWLIAATFIQVMRPLNDRCHM----RVHWIIPFLFLHVVY 171
              K        + L  V       A F       N  C +    R   +  FL      
Sbjct: 238 LKSKPYE--NCLLVLLNVQNAKAWNA-F-------NLSCKILLTTRFKQVTDFLSAATTT 287

Query: 172 VASLVGFMAAIRHIEFRFDELRDL---WQGIIVS-----ASSIGLWVFAYLLNEIHDDIS 223
             SL              DE++ L   +             +      + +   I D ++
Sbjct: 288 HISLDHHSMT-----LTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLA 342

Query: 224 ----WLQVASRFLLLVMGGILVVVFFSISSSEPLLSQISLRKREPKEFETMGQALGI-PD 278
               W  V    L  ++                   + SL   EP E+  M   L + P 
Sbjct: 343 TWDNWKHVNCDKLTTII-------------------ESSLNVLEPAEYRKMFDRLSVFPP 383

Query: 279 SGLLLRREPTPVI-------DPNEPLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHE 331
           S  +    PT ++         ++ +  +    K  +  +       +  S+     ++ 
Sbjct: 384 SAHI----PTILLSLIWFDVIKSDVMVVV---NKLHKYSLVEKQPKESTISIP---SIYL 433

Query: 332 HGKIPVDDHVRRIYMARHIIEKY 354
             K+ +++      + R I++ Y
Sbjct: 434 ELKVKLEN---EYALHRSIVDHY 453

>1cmz_A Protein (GAIP (G-alpha interacting) protein); RGS, regulator of G protein, signaling protein regulation; NMR {Homo sapiens} SCOP: a.91.1.1 Length = 152

 Score = 50.1 bits (119), Expect = 9e-08
 Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 4/75 (5%)

Query: 286 EPTP--VIDPNEPLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRR 343
            P+P  V    +  DKL+ +   R  F AF  +  + E++ F+    E       +    
Sbjct: 11  IPSPEEVQSWAQSFDKLMHSPAGRSVFRAFLRTEYSEENMLFWLACEELKAEA--NQHVV 68

Query: 344 IYMARHIIEKYIVAG 358
              AR I E Y+   
Sbjct: 69  DEKARLIYEDYVSIL 83

>2dlv_A RGS18, regulator of G-protein signaling 18; RGS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 140

 Score = 49.2 bits (117), Expect = 1e-07
 Identities = 16/72 (22%), Positives = 30/72 (41%), Gaps = 2/72 (2%)

Query: 287 PTPVIDPNEPLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYM 346
           P   +   E  DKLL ++   ++F  F  +  + E++ F+    +  K       +    
Sbjct: 9   PEEAVKWGESFDKLLSHRDGLEAFTRFLKTEFSEENIEFWIACEDFKKSK--GPQQIHLK 66

Query: 347 ARHIIEKYIVAG 358
           A+ I EK+I   
Sbjct: 67  AKAIYEKFIQTD 78

>2dlr_A RGS10, regulator of G-protein signaling 10; RGS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 149

 Score = 49.6 bits (118), Expect = 1e-07
 Identities = 11/64 (17%), Positives = 25/64 (39%), Gaps = 2/64 (3%)

Query: 295 EPLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKY 354
             L+ LL + +  + F  F     + E+V F+    +  K+      +    A+ I   +
Sbjct: 17  ASLENLLEDPEGVKRFREFLKKEFSEENVLFWLACEDFKKMQDKT--QMQEKAKEIYMTF 74

Query: 355 IVAG 358
           + + 
Sbjct: 75  LSSK 78

>1zv4_X RGS17, regulator of G-protein signaling 17; human RGSZ2, human RGS17(Z2), regulator of G-protein signali opioid receptor interacting protein; 2.40A {Homo sapiens} Length = 158

 Score = 47.7 bits (113), Expect = 5e-07
 Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 4/75 (5%)

Query: 286 EPTP--VIDPNEPLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRR 343
            PT   V+  ++  DK++     R  F  F  +  + E++ F+    +  K    +    
Sbjct: 24  NPTAEEVLSWSQNFDKMMKAPAGRNLFREFLRTEYSEENLLFWLACEDLKKEQ--NKKVI 81

Query: 344 IYMARHIIEKYIVAG 358
              AR I E YI   
Sbjct: 82  EEKARMIYEDYISIL 96

>3c7l_A Regulator of G-protein signaling 16; RGS, RGS16, GAP, GTPase activating protein, heterotrimeric G-protein, lipoprotein, palmitate, phosphoprotein; 1.89A {Mus musculus} PDB: 3c7k_B* 2ik8_B* Length = 137

 Score = 46.9 bits (111), Expect = 8e-07
 Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 2/64 (3%)

Query: 295 EPLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKY 354
           E  D LL +K    +F AF  +  + E++ F+    E  KI      +    A HI ++Y
Sbjct: 20  ESFDLLLNSKNGVAAFHAFLKTEFSEENLEFWLACEEFKKIR--SATKLASRAHHIFDEY 77

Query: 355 IVAG 358
           I + 
Sbjct: 78  IRSE 81

>2jm5_A RGS18, regulator of G-protein signaling 18; signaling protein, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens} SCOP: a.91.1.1 PDB: 2owi_A Length = 151

 Score = 47.3 bits (112), Expect = 8e-07
 Identities = 16/74 (21%), Positives = 31/74 (41%), Gaps = 4/74 (5%)

Query: 287 PTP--VIDPNEPLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRI 344
            +P   +   E  DKLL ++   ++F  F  +  + E++ F+    +  K       +  
Sbjct: 3   VSPEEAVKWGESFDKLLSHRDGLEAFTRFLKTEFSEENIEFWIACEDFKKS--KGPQQIH 60

Query: 345 YMARHIIEKYIVAG 358
             A+ I EK+I   
Sbjct: 61  LKAKAIYEKFIQTD 74

>2pbi_A Regulator of G-protein signaling 9; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} Length = 424

 Score = 47.5 bits (112), Expect = 4e-06
 Identities = 17/94 (18%), Positives = 33/94 (35%), Gaps = 3/94 (3%)

Query: 262 REPKEFETMGQALGIPDSGLLLRREPTPVIDPNEPLDKLLLNKKFRQSFMAFADSCLAGE 321
                + T        ++ L+       V        +L+ + K RQSF  F     +GE
Sbjct: 267 LPSNPWITDDTQFWDLNAKLVEIPTKMRVERWAFNFSELIRDPKGRQSFQYFLKKEFSGE 326

Query: 322 SVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYI 355
           ++ F+E   +       D  +    A  I + ++
Sbjct: 327 NLGFWEACEDLKYG---DQSKVKEKAEEIYKLFL 357

>1fqi_A RGS9, regulator of G-protein signaling 9; phototransduction, ROD, GAP, signaling protein; 1.94A {Bos taurus} SCOP: a.91.1.1 PDB: 1fqj_B* 1fqk_B* Length = 147

 Score = 44.7 bits (105), Expect = 7e-06
 Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 3/64 (4%)

Query: 295 EPLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKY 354
               +L+ + K RQSF  F     +GE++ F+E   +       D  +    A  I + +
Sbjct: 23  FNFSELIRDPKGRQSFQHFLRKEFSGENLGFWEACEDLKYG---DQSKVKEKAEEIYKLF 79

Query: 355 IVAG 358
           +  G
Sbjct: 80  LAPG 83

>1dk8_A Axin; alpha-helix, PI-helix, signaling protein; HET: SO4; 1.57A {Homo sapiens} SCOP: a.91.1.1 PDB: 1emu_A Length = 147

 Score = 43.9 bits (103), Expect = 1e-05
 Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 3/78 (3%)

Query: 284 RREPTP-VIDPNEPLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHV- 341
              PTP  +   E L  LL ++     F  F       + + F+       K+   D   
Sbjct: 2   SASPTPPYLKWAESLHSLLDDQDGISLFRTFLKQEGCADLLDFWFACTGFRKLEPCDSNE 61

Query: 342 -RRIYMARHIIEKYIVAG 358
            +R+ +AR I  KYI+  
Sbjct: 62  EKRLKLARAIYRKYILDN 79

>2oj4_A RGS3, regulator of G-protein signaling 3, RGP3; RGS domain, signaling protein inhibitor; 2.30A {Homo sapiens} Length = 127

 Score = 42.6 bits (100), Expect = 2e-05
 Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 2/62 (3%)

Query: 297 LDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYIV 356
           L+KLL++K     F AF  +  + E++ F+    +  K+      +    A+ I  +YI 
Sbjct: 11  LEKLLVHKYGLAVFQAFLRTEFSEENLEFWLACEDFKKVK--SQSKMASKAKKIFAEYIA 68

Query: 357 AG 358
             
Sbjct: 69  IQ 70

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	359
2ihb_B	153	Regulator of G-protein signalling 10, guanine nucl	98.82
2bv1_A	145	Regulator of G-protein signalling 1; RGS1, RGS, st	98.76
2jnu_A	154	RGS14, regulator of G-protein signaling 14; regula	98.34
2ebz_A	155	RGS12, regulator of G-protein signaling 12; RGS do	98.3
2dlv_A	140	RGS18, regulator of G-protein signaling 18; RGS do	98.25
2oj4_A	127	RGS3, regulator of G-protein signaling 3, RGP3; RG	98.24
2jm5_A	151	RGS18, regulator of G-protein signaling 18; signal	98.17
2a72_A	146	Regulator of G-protein signalling 7; human RGS7, r	98.15
2af0_A	146	Regulator of G-protein signaling 2; helix, structu	98.1
1cmz_A	152	Protein (GAIP (G-alpha interacting) protein); RGS,	98.09
2ihd_A	155	RGS8, regulator of G-protein signaling 8; signalin	98.07
3c7l_A	137	Regulator of G-protein signaling 16; RGS, RGS16, G	98.05
1dk8_A	147	Axin; alpha-helix, PI-helix, signaling protein; HE	98.03
2crp_A	150	RGS5, regulator of G-protein signaling 5; RGS doma	98.0
1fqi_A	147	RGS9, regulator of G-protein signaling 9; phototra	97.97
2dlr_A	149	RGS10, regulator of G-protein signaling 10; RGS do	97.94
1zv4_X	158	RGS17, regulator of G-protein signaling 17; human	97.76
1agr_E	205	RGS4; GI-alpha-1, hydrolase, signal transduction,	97.75
2pbi_A	424	Regulator of G-protein signaling 9; helix WRAP, RG	97.1

>2ihb_B Regulator of G-protein signalling 10, guanine nucleotide-binding protein G(K) subunit A; RGS, heterotrimeric G protein, signall complex; HET: GDP; 2.71A {Homo sapiens} PDB: 2i59_A

Probab=98.82  E-value=3.2e-10  Score=91.23  Aligned_cols=94  Identities=18%  Similarity=0.236  Sum_probs=58.5

Q ss_pred             hccccCchhhhhhhhhcCCCCCcccccccCCCCCCCCChHHHHhhchhHHHHHHhhhhhcccCccchhhHhhhhhCCCCc
Q 018201          258 SLRKREPKEFETMGQALGIPDSGLLLRREPTPVIDPNEPLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPV  337 (359)
Q Consensus       258 slrkRe~~ef~tMgqALGipdSG~l~~~ep~~~idpNePLdkLLlnkrFRqSfmaFADSclAGE~vHFy~EV~E~~Kip~  337 (359)
                      ++|||++.|+.| |+  |.|+++-....   .+-.-+..||++|.|+.-|+.|++|.++..+.|.+.||.+|.+..+.+.
T Consensus         2 ~~~~~~~~~~~~-~~--~~~~~~~~~~~---~~~~w~~sl~~iL~dp~g~~~F~~FL~~e~~~Enl~Fw~~ve~yk~~~~   75 (153)
T 2ihb_B            2 MSRKRPPSDIHD-SD--GSSSSSHQSLK---STAKWAASLENLLEDPEGVKRFREFLKKEFSEENVLFWLACEDFKKMQD   75 (153)
T ss_dssp             --------------------------CH---HHHHHHHCHHHHHHSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCCC
T ss_pred             ccccCCcccccc-CC--CCccCCCCCHH---HHHHHHHhHHHHHCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHcCCCC
Confidence            589999999999 76  77666532111   1122345799999999999999999999999999999999999888753


Q ss_pred             cchhHHHHHHHHHHHHHHHhCC
Q 018201          338 DDHVRRIYMARHIIEKYIVAGL  359 (359)
Q Consensus       338 ~d~vrRIYMArHIieKyivaGa  359 (359)
                        .-.|.-+|++|.++||..||
T Consensus        76 --~~~~~~~a~~Iy~~yi~~~s   95 (153)
T 2ihb_B           76 --KTQMQEKAKEIYMTFLSSKA   95 (153)
T ss_dssp             --HHHHHHHHHHHHHHHTSTTC
T ss_pred             --HHHHHHHHHHHHHHHcCCCC
Confidence              34577899999999998875

>2bv1_A Regulator of G-protein signalling 1; RGS1, RGS, structural genomics, struct genomics consortium, B-cell activation, phosphorylation; 2.0A {Homo sapiens} PDB: 2gtp_C*

Probab=98.76  E-value=1.6e-09  Score=86.20  Aligned_cols=83  Identities=20%  Similarity=0.225  Sum_probs=66.0

Q ss_pred             cCCCCCcccccccCCCCCCCCChHHHHhhchhHHHHHHhhhhhcccCccchhhHhhhhhCCCCccchhHHHHHHHHHHHH
Q 018201          274 LGIPDSGLLLRREPTPVIDPNEPLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEK  353 (359)
Q Consensus       274 LGipdSG~l~~~ep~~~idpNePLdkLLlnkrFRqSfmaFADSclAGE~vHFy~EV~E~~Kip~~d~vrRIYMArHIieK  353 (359)
                      -|||++|+..+..+-.+-.-+..||++|.|+.-|+.|++|.++..+.|++.||.+|.+..+.+.++   |.-+|++|.++
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~sl~~iL~~p~g~~~F~~FL~~e~s~Enl~Fw~~ve~yk~~~~~~---~~~~a~~Iy~~   79 (145)
T 2bv1_A            3 SGMKSSKSKDVLSAAEVMQWSQSLEKLLANQTGQNVFGSFLKSEFSEENIEFWLACEDYKKTESDL---LPCKAEEIYKA   79 (145)
T ss_dssp             --------CEEEEHHHHHHTTTCHHHHHHSHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHTSCGGG---HHHHHHHHHHH
T ss_pred             cccccCCCCCCCCHHHHHHHHHhHHHHHCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccCcHH---HHHHHHHHHHH
Confidence            389999987665555555667899999999999999999999999999999999999999987665   77899999999


Q ss_pred             HHHhCC
Q 018201          354 YIVAGL  359 (359)
Q Consensus       354 yivaGa  359 (359)
                      ||..||
T Consensus        80 yi~~~s   85 (145)
T 2bv1_A           80 FVHSDA   85 (145)
T ss_dssp             HTSTTC
T ss_pred             HCCCCC
Confidence            998875

>2jnu_A RGS14, regulator of G-protein signaling 14; regulator of G-protein signalling domain, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens}

Probab=98.34  E-value=3.1e-07  Score=73.88  Aligned_cols=67  Identities=19%  Similarity=0.301  Sum_probs=62.2

Q ss_pred             CCChHHHHhhchhHHHHHHhhhhhcccCccchhhHhhhhhCCCCccchhHHHHHHHHHHHHHHHhCC
Q 018201          293 PNEPLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYIVAGL  359 (359)
Q Consensus       293 pNePLdkLLlnkrFRqSfmaFADSclAGE~vHFy~EV~E~~Kip~~d~vrRIYMArHIieKyivaGa  359 (359)
                      -+..||++|.|+--|+-|++|.++..+.|++.||.+|.+..+.+.+|.-+|.-+|++|.++||..||
T Consensus        11 w~~sl~~iL~dp~g~~~F~~FL~~e~~~Enl~Fw~~ve~~k~~~~~~~~~~~~~a~~Iy~~yi~~~s   77 (154)
T 2jnu_A           11 WALSFERLLQDPLGLAYFTEFLKKEFSAENVTFWKACERFQQIPASDTQQLAQEARNIYQEFLSSQA   77 (154)
T ss_dssp             GGTCHHHHHHSHHHHHHHHHHTTTSSCTHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHTSTTC
T ss_pred             HHHhHHHHHCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHcCCCC
Confidence            3567999999999999999999999999999999999999999887877889999999999998875

>2ebz_A RGS12, regulator of G-protein signaling 12; RGS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.30  E-value=3.4e-07  Score=73.68  Aligned_cols=68  Identities=19%  Similarity=0.327  Sum_probs=62.2

Q ss_pred             CCCChHHHHhhchhHHHHHHhhhhhcccCccchhhHhhhhhCCCCccchhHHHHHHHHHHHHHHHhCC
Q 018201          292 DPNEPLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYIVAGL  359 (359)
Q Consensus       292 dpNePLdkLLlnkrFRqSfmaFADSclAGE~vHFy~EV~E~~Kip~~d~vrRIYMArHIieKyivaGa  359 (359)
                      .-+..||++|.|+.-|+-|++|.++..+.|.+.||.+|.+..+++.+|.-+|.-.|++|.++||..||
T Consensus        14 ~w~~sl~~iL~~p~g~~~F~~FL~~e~~~Enl~Fw~~ve~yk~~~~~~~~~~~~~a~~Iy~~yi~~~s   81 (155)
T 2ebz_A           14 SWAVSFERLLQDPVGVRYFSDFLRKEFSEENILFWQACEYFNHVPAHDKKELSYRAREIFSKFLCSKA   81 (155)
T ss_dssp             HHHHCHHHHHHSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHSSSSC
T ss_pred             HHHHhHHHHHCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHcCCCC
Confidence            34557999999999999999999999999999999999999999887777788899999999998875

>2dlv_A RGS18, regulator of G-protein signaling 18; RGS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.25  E-value=9.3e-07  Score=69.27  Aligned_cols=64  Identities=23%  Similarity=0.327  Sum_probs=57.5

Q ss_pred             CChHHHHhhchhHHHHHHhhhhhcccCccchhhHhhhhhCCCCccchhHHHHHHHHHHHHHHHhCC
Q 018201          294 NEPLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYIVAGL  359 (359)
Q Consensus       294 NePLdkLLlnkrFRqSfmaFADSclAGE~vHFy~EV~E~~Kip~~d~vrRIYMArHIieKyivaGa  359 (359)
                      +..||++|.|+..|+-|++|.++..+.|++.||.+|.+..+.+.  .-+|.-+|++|.++||..||
T Consensus        16 ~~sl~~iL~~~~~~~~F~~Fl~~e~s~enl~Fw~~ve~~k~~~~--~~~~~~~a~~Iy~~yi~~~s   79 (140)
T 2dlv_A           16 GESFDKLLSHRDGLEAFTRFLKTEFSEENIEFWIACEDFKKSKG--PQQIHLKAKAIYEKFIQTDA   79 (140)
T ss_dssp             TTCHHHHHHSHHHHHHHHHHHHHTTCTHHHHHHHHHHHHTTCCH--HHHHHHHHHHHHHHTTSSSS
T ss_pred             HHhHHHHHCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCC--HHHHHHHHHHHHHHHCCCCC
Confidence            55799999999999999999999999999999999999999863  34577899999999998875

>2oj4_A RGS3, regulator of G-protein signaling 3, RGP3; RGS domain, signaling protein inhibitor; 2.30A {Homo sapiens}

Probab=98.24  E-value=1.2e-06  Score=67.17  Aligned_cols=63  Identities=25%  Similarity=0.384  Sum_probs=56.9

Q ss_pred             ChHHHHhhchhHHHHHHhhhhhcccCccchhhHhhhhhCCCCccchhHHHHHHHHHHHHHHHhCC
Q 018201          295 EPLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYIVAGL  359 (359)
Q Consensus       295 ePLdkLLlnkrFRqSfmaFADSclAGE~vHFy~EV~E~~Kip~~d~vrRIYMArHIieKyivaGa  359 (359)
                      ..||++|.|+.-|+.|++|.++..++|++.||.+|.+..+.+.++  +|.-+|++|.++||..||
T Consensus         9 ~sl~~iL~~~~g~~~F~~Fl~~e~~~enl~Fw~~ve~~k~~~~~~--~~~~~a~~I~~~yi~~~s   71 (127)
T 2oj4_A            9 ESLEKLLVHKYGLAVFQAFLRTEFSEENLEFWLACEDFKKVKSQS--KMASKAKKIFAEYIAIQA   71 (127)
T ss_dssp             TCHHHHHTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCHH--HHHHHHHHHHHHHTSTTC
T ss_pred             hHHHHHHCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCHH--HHHHHHHHHHHHHccCCC
Confidence            469999999999999999999999999999999999999986443  567789999999998875

>2jm5_A RGS18, regulator of G-protein signaling 18; signaling protein, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens} SCOP: a.91.1.1 PDB: 2owi_A

Probab=98.17  E-value=1.7e-06  Score=69.36  Aligned_cols=64  Identities=23%  Similarity=0.327  Sum_probs=57.5

Q ss_pred             CChHHHHhhchhHHHHHHhhhhhcccCccchhhHhhhhhCCCCccchhHHHHHHHHHHHHHHHhCC
Q 018201          294 NEPLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYIVAGL  359 (359)
Q Consensus       294 NePLdkLLlnkrFRqSfmaFADSclAGE~vHFy~EV~E~~Kip~~d~vrRIYMArHIieKyivaGa  359 (359)
                      +..||++|.|+..++-|++|.++..+.|.+.||.+|.+..+.+.  .-.+.-+|++|.++||..||
T Consensus        12 ~~sl~~iL~~p~g~~~F~~FL~~e~s~Enl~Fw~~ve~yk~~~~--~~~~~~~a~~Iy~~yi~~~s   75 (151)
T 2jm5_A           12 GESFDKLLSHRDGLEAFTRFLKTEFSEENIEFWIACEDFKKSKG--PQQIHLKAKAIYEKFIQTDA   75 (151)
T ss_dssp             TTCHHHHHHSHHHHHHHHHHHHHTTCTTTHHHHHHHHHHHTCCC--HHHHHHHHHHHHHHTTCSSS
T ss_pred             HHhHHHHHCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCC--HHHHHHHHHHHHHHHccCcc
Confidence            46799999999999999999999999999999999999998863  34567899999999998875

>2a72_A Regulator of G-protein signalling 7; human RGS7, regulator of G-protein signaling 7, GTPase-activ proteins (GAP), structural genomics; 2.00A {Homo sapiens} PDB: 2d9j_A 2es0_A

Probab=98.15  E-value=2e-06  Score=68.36  Aligned_cols=63  Identities=21%  Similarity=0.381  Sum_probs=56.9

Q ss_pred             CChHHHHhhchhHHHHHHhhhhhcccCccchhhHhhhhhCCCCccchhHHHHHHHHHHHHHHHhCC
Q 018201          294 NEPLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYIVAGL  359 (359)
Q Consensus       294 NePLdkLLlnkrFRqSfmaFADSclAGE~vHFy~EV~E~~Kip~~d~vrRIYMArHIieKyivaGa  359 (359)
                      +..||++|.|+..|+.|++|.++..+.|.+.||.+|.+..+.+.++   +.-+|++|.++||..||
T Consensus        14 ~~sl~~iL~~p~g~~~F~~Fl~~e~~~Enl~Fw~~ve~~k~~~~~~---~~~~a~~Iy~~yi~~~s   76 (146)
T 2a72_A           14 GFGMDEALKDPVGREQFLKFLESEFSSENLRFWLAVEDLKKRPIKE---VPSRVQEIWQEFLAPGA   76 (146)
T ss_dssp             GGCHHHHHHSHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTSCGGG---HHHHHHHHHHHHTSTTC
T ss_pred             HhHHHHHhCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhcCHHH---HHHHHHHHHHHHcCCCC
Confidence            4579999999999999999999999999999999999999987554   56789999999998875

>2af0_A Regulator of G-protein signaling 2; helix, structural genomics, structural genomics consortium, SGC, signaling protein; 2.30A {Homo sapiens} PDB: 2v4z_B*

Probab=98.10  E-value=2.8e-06  Score=67.35  Aligned_cols=64  Identities=25%  Similarity=0.304  Sum_probs=57.4

Q ss_pred             CChHHHHhhchhHHHHHHhhhhhcccCccchhhHhhhhhCCCCccchhHHHHHHHHHHHHHHHhCC
Q 018201          294 NEPLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYIVAGL  359 (359)
Q Consensus       294 NePLdkLLlnkrFRqSfmaFADSclAGE~vHFy~EV~E~~Kip~~d~vrRIYMArHIieKyivaGa  359 (359)
                      +..||++|.|+..|+-|++|.++..+.|++.||.+|.+..+.+.+  -+|.-+|++|.++||..||
T Consensus        24 ~~sl~~iL~~p~g~~~F~~Fl~~e~s~Enl~Fw~~ve~~k~~~~~--~~~~~~a~~Iy~~yi~~~s   87 (146)
T 2af0_A           24 SEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSP--QKLSSKARKIYTDFIEKEA   87 (146)
T ss_dssp             TTCHHHHHHSHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHTCCCH--HHHHHHHHHHHHHHTSTTC
T ss_pred             HhHHHHHHCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccCCH--HHHHHHHHHHHHHHCcCCC
Confidence            567999999999999999999999999999999999999988743  3467789999999998875

>1cmz_A Protein (GAIP (G-alpha interacting) protein); RGS, regulator of G protein, signaling protein regulation; NMR {Homo sapiens} SCOP: a.91.1.1

Probab=98.09  E-value=2e-06  Score=68.61  Aligned_cols=64  Identities=23%  Similarity=0.209  Sum_probs=56.8

Q ss_pred             CChHHHHhhchhHHHHHHhhhhhcccCccchhhHhhhhhCCCCccchhHHHHHHHHHHHHHHHhCC
Q 018201          294 NEPLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYIVAGL  359 (359)
Q Consensus       294 NePLdkLLlnkrFRqSfmaFADSclAGE~vHFy~EV~E~~Kip~~d~vrRIYMArHIieKyivaGa  359 (359)
                      +..||++|.|+..|+.|++|.++..+.|++.||.+|.+..+.+.++  .+--+|++|.++||..||
T Consensus        21 ~~sl~~iL~~p~~~~~F~~Fl~~e~s~Enl~Fw~~ve~~k~~~~~~--~~~~~a~~Iy~~yi~~~s   84 (152)
T 1cmz_A           21 AQSFDKLMHSPAGRSVFRAFLRTEYSEENMLFWLACEELKAEANQH--VVDEKARLIYEDYVSILS   84 (152)
T ss_dssp             TTCSHHHHSSHHHHHHHHHHHHHHTCCHHHHHHHHHHHGGGTCCSH--HHHHHHHHHHHHTTTCSS
T ss_pred             HhhHHHHHCChHHHHHHHHHHHHhcChhhHHHHHHHHHHHhcCCHH--HHHHHHHHHHHHHcCCCC
Confidence            4579999999999999999999999999999999999999886444  345689999999998875

>2ihd_A RGS8, regulator of G-protein signaling 8; signaling protein, structural genomics, structura genomics consortium, SGC, signaling protein; 1.70A {Homo sapiens} PDB: 2ode_B* 2bt2_A

Probab=98.07  E-value=4.6e-06  Score=67.68  Aligned_cols=64  Identities=22%  Similarity=0.310  Sum_probs=57.6

Q ss_pred             CChHHHHhhchhHHHHHHhhhhhcccCccchhhHhhhhhCCCCccchhHHHHHHHHHHHHHHHhCC
Q 018201          294 NEPLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYIVAGL  359 (359)
Q Consensus       294 NePLdkLLlnkrFRqSfmaFADSclAGE~vHFy~EV~E~~Kip~~d~vrRIYMArHIieKyivaGa  359 (359)
                      +..||++|.|+.-|+.|++|.++..+.|++.|+.+|.+..+.+.  .-+|.-+|+.|.++||..||
T Consensus        36 ~~sl~~iL~dp~g~~~F~~FL~~e~s~Enl~Fw~~ve~yk~~~~--~~~~~~~a~~Iy~~yi~~~s   99 (155)
T 2ihd_A           36 ADSFDVLLSHKYGVAAFRAFLKTEFSEENLEFWLACEEFKKTRS--TAKLVSKAHRIFEEFVDVQA   99 (155)
T ss_dssp             TSCHHHHHTSHHHHHHHHHHHHHTTCTHHHHHHHHHHHHTTCCC--HHHHHHHHHHHHHHHTSTTC
T ss_pred             HHhHHHHHCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCC--HHHHHHHHHHHHHHHCcCCC
Confidence            45799999999999999999999999999999999999999873  34567889999999998875

>3c7l_A Regulator of G-protein signaling 16; RGS, RGS16, GAP, GTPase activating protein, heterotrimeric G-protein, lipoprotein, palmitate, phosphoprotein; 1.89A {Mus musculus} PDB: 3c7k_B* 2ik8_B*

Probab=98.05  E-value=4e-06  Score=66.21  Aligned_cols=64  Identities=28%  Similarity=0.381  Sum_probs=57.5

Q ss_pred             CChHHHHhhchhHHHHHHhhhhhcccCccchhhHhhhhhCCCCccchhHHHHHHHHHHHHHHHhCC
Q 018201          294 NEPLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYIVAGL  359 (359)
Q Consensus       294 NePLdkLLlnkrFRqSfmaFADSclAGE~vHFy~EV~E~~Kip~~d~vrRIYMArHIieKyivaGa  359 (359)
                      +..||++|.|+..|+.|++|.++..+.|++.||.+|.+..+.+..  -+|.-+|+.|.++||..||
T Consensus        19 ~~sl~~iL~~p~g~~~F~~Fl~~e~s~Enl~Fw~~ve~~k~~~~~--~~~~~~a~~Iy~~yi~~~s   82 (137)
T 3c7l_A           19 RESFDLLLNSKNGVAAFHAFLKTEFSEENLEFWLACEEFKKIRSA--TKLASRAHHIFDEYIRSEA   82 (137)
T ss_dssp             HHCHHHHTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTTCCCH--HHHHHHHHHHHHHHTSTTC
T ss_pred             HHhHHHHHCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCH--HHHHHHHHHHHHHHCCCCC
Confidence            457999999999999999999999999999999999999998743  3567789999999998875

>1dk8_A Axin; alpha-helix, PI-helix, signaling protein; HET: SO4; 1.57A {Homo sapiens} SCOP: a.91.1.1 PDB: 1emu_A

Probab=98.03  E-value=2.4e-06  Score=67.45  Aligned_cols=67  Identities=24%  Similarity=0.238  Sum_probs=58.7

Q ss_pred             CCChHHHHhhchhHHHHHHhhhhhcccCccchhhHhhhhhCCCCccc--hhHHHHHHHHHHHHHH-HhCC
Q 018201          293 PNEPLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDD--HVRRIYMARHIIEKYI-VAGL  359 (359)
Q Consensus       293 pNePLdkLLlnkrFRqSfmaFADSclAGE~vHFy~EV~E~~Kip~~d--~vrRIYMArHIieKyi-vaGa  359 (359)
                      -+..||++|.|+.-|+-|++|.++..+.|.+.||.+|.+..+..++|  .-.|.-+|++|.++|| ..||
T Consensus        12 w~~sl~~iL~~p~g~~~F~~FL~~e~~~enl~Fw~~ve~~k~~~~~~~~~~~~~~~a~~Iy~~yi~~~~s   81 (147)
T 1dk8_A           12 WAESLHSLLDDQDGISLFRTFLKQEGCADLLDFWFACTGFRKLEPCDSNEEKRLKLARAIYRKYILDNNG   81 (147)
T ss_dssp             HHHCHHHHTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHCCCCTTSHHHHHHHHHHHHHHHTSCTTS
T ss_pred             HHhCHHHHHCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHHhhhcccCCHHHHHHHHHHHHHHHhCCccC
Confidence            35679999999999999999999999999999999999999886543  2377889999999999 7664

>2crp_A RGS5, regulator of G-protein signaling 5; RGS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.00  E-value=3.8e-06  Score=67.07  Aligned_cols=63  Identities=29%  Similarity=0.365  Sum_probs=56.4

Q ss_pred             ChHHHHhhchhHHHHHHhhhhhcccCccchhhHhhhhhCCCCccchhHHHHHHHHHHHHHHHhCC
Q 018201          295 EPLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYIVAGL  359 (359)
Q Consensus       295 ePLdkLLlnkrFRqSfmaFADSclAGE~vHFy~EV~E~~Kip~~d~vrRIYMArHIieKyivaGa  359 (359)
                      ..||++|.|+..|+-|++|.++..+.|++.||.+|.+..+.+..+  .|.-+|++|.++||..||
T Consensus        27 ~sl~~iL~~~~g~~~F~~Fl~~e~s~Enl~Fw~~ve~yk~~~~~~--~~~~~a~~Iy~~yi~~~s   89 (150)
T 2crp_A           27 DSLDKLLQNNYGLASFKSFLKSEFSEENLEFWIACEDYKKIKSPA--KMAEKAKQIYEEFIQTEA   89 (150)
T ss_dssp             HCHHHHHHSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCCTT--HHHHHHHHHHHHTSSTTC
T ss_pred             HhHHHHHCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHccCCHH--HHHHHHHHHHHHHccCCC
Confidence            369999999999999999999999999999999999999887543  456789999999998875

>1fqi_A RGS9, regulator of G-protein signaling 9; phototransduction, ROD, GAP, signaling protein; 1.94A {Bos taurus} SCOP: a.91.1.1 PDB: 1fqj_B* 1fqk_B*

Probab=97.97  E-value=6.5e-06  Score=65.71  Aligned_cols=63  Identities=22%  Similarity=0.290  Sum_probs=55.9

Q ss_pred             CChHHHHhhchhHHHHHHhhhhhcccCccchhhHhhhhhCCCCccchhHHHHHHHHHHHHHHHhCC
Q 018201          294 NEPLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYIVAGL  359 (359)
Q Consensus       294 NePLdkLLlnkrFRqSfmaFADSclAGE~vHFy~EV~E~~Kip~~d~vrRIYMArHIieKyivaGa  359 (359)
                      +..||++|.|+.-|+.|++|.++..+.|++.|+.+|.+..+.+.+   +|--.|++|.++||..||
T Consensus        22 ~~sl~~iL~~p~g~~~F~~FL~~e~~~enl~Fw~~ve~~k~~~~~---~~~~~a~~Iy~~yi~~~s   84 (147)
T 1fqi_A           22 AFNFSELIRDPKGRQSFQHFLRKEFSGENLGFWEACEDLKYGDQS---KVKEKAEEIYKLFLAPGA   84 (147)
T ss_dssp             TTCHHHHHTSHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHTSCGG---GHHHHHHHHHHHHTSTTC
T ss_pred             HhHHHHHHCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCHH---HHHHHHHHHHHHHcCCCC
Confidence            457999999999999999999999999999999999999887533   345689999999998875

>2dlr_A RGS10, regulator of G-protein signaling 10; RGS domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.94  E-value=2.3e-06  Score=68.26  Aligned_cols=65  Identities=17%  Similarity=0.212  Sum_probs=57.3

Q ss_pred             CCChHHHHhhchhHHHHHHhhhhhcccCccchhhHhhhhhCCCCccchhHHHHHHHHHHHHHHHhCC
Q 018201          293 PNEPLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYIVAGL  359 (359)
Q Consensus       293 pNePLdkLLlnkrFRqSfmaFADSclAGE~vHFy~EV~E~~Kip~~d~vrRIYMArHIieKyivaGa  359 (359)
                      .+..||++|.|+..|+-|++|.++..+.|.+.||.+|.+..+++.  .-+|.-+|++|.++||..||
T Consensus        15 w~~sl~~iL~~~~g~~~F~~FL~~e~~~Enl~Fw~~ve~yk~~~~--~~~~~~~a~~Iy~~yi~~~s   79 (149)
T 2dlr_A           15 WAASLENLLEDPEGVKRFREFLKKEFSEENVLFWLACEDFKKMQD--KTQMQEKAKEIYMTFLSSKA   79 (149)
T ss_dssp             HHHCHHHHHHSHHHHHHHHHHHHHHTCTHHHHHHHHHHHHHHHCC--HHHHHHHHHHHHTTTSSTTC
T ss_pred             HHHhHHHHHCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhccCC--HHHHHHHHHHHHHHHcCCCC
Confidence            345799999999999999999999999999999999999888753  34577899999999998875

>1zv4_X RGS17, regulator of G-protein signaling 17; human RGSZ2, human RGS17(Z2), regulator of G-protein signali opioid receptor interacting protein; 2.40A {Homo sapiens}

Probab=97.76  E-value=1.4e-05  Score=65.10  Aligned_cols=64  Identities=22%  Similarity=0.202  Sum_probs=55.6

Q ss_pred             CChHHHHhhchhHHHHHHhhhhhcccCccchhhHhhhhhCCCCccchhHHHHHHHHHHHHHHHhCC
Q 018201          294 NEPLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYIVAGL  359 (359)
Q Consensus       294 NePLdkLLlnkrFRqSfmaFADSclAGE~vHFy~EV~E~~Kip~~d~vrRIYMArHIieKyivaGa  359 (359)
                      +..||++|.|+..|+-|++|.++..+.|++.||.+|.+..+.+..+  .|--+|+.|.++||..||
T Consensus        34 ~~sl~~iL~dp~g~~~F~~FL~~e~s~Enl~Fw~~ve~yk~~~~~~--~~~~~a~~Iy~~yi~~~s   97 (158)
T 1zv4_X           34 SQNFDKMMKAPAGRNLFREFLRTEYSEENLLFWLACEDLKKEQNKK--VIEEKARMIYEDYISILS   97 (158)
T ss_dssp             TTCHHHHHTSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCCSHH--HHHHHHHHHHHHHTCCC-
T ss_pred             HhhHHHHhCCHHHHHHHHHHHHHccCHhHHHHHHHHHHHHhcCCHH--HHHHHHHHHHHHHCCCCC
Confidence            4569999999999999999999999999999999999988876433  355789999999998775

>1agr_E RGS4; GI-alpha-1, hydrolase, signal transduction, complex (signal transduction/regulator), GTP-binding, GTPase activating protein; HET: GDP CIT; 2.80A {Rattus norvegicus} SCOP: a.91.1.1 PDB: 1ezt_A 1ezy_A

Probab=97.75  E-value=1.8e-05  Score=68.16  Aligned_cols=64  Identities=23%  Similarity=0.290  Sum_probs=56.9

Q ss_pred             CChHHHHhhchhHHHHHHhhhhhcccCccchhhHhhhhhCCCCccchhHHHHHHHHHHHHHHHhCC
Q 018201          294 NEPLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYIVAGL  359 (359)
Q Consensus       294 NePLdkLLlnkrFRqSfmaFADSclAGE~vHFy~EV~E~~Kip~~d~vrRIYMArHIieKyivaGa  359 (359)
                      +..||++|.|+--|+.|++|.++..+.|++.||.+|.+..+++.++  ++.-.|+.|.++||..||
T Consensus        60 ~~sle~IL~dp~g~~~F~~FL~~e~s~EnL~Fw~ave~yk~~~~~~--~~~~~A~~Iy~~YI~~~S  123 (205)
T 1agr_E           60 AESLENLINHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPS--KLSPKAKKIYNEFISVQA  123 (205)
T ss_dssp             TTCHHHHHHSHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHCCCTT--THHHHHHHHHHHHTSTTC
T ss_pred             HhhHHHHhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccCCHH--HHHHHHHHHHHHHCCCCC
Confidence            4578999999999999999999999999999999999998887544  356689999999998875

>2pbi_A Regulator of G-protein signaling 9; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}

Probab=97.10  E-value=0.00034  Score=66.95  Aligned_cols=63  Identities=22%  Similarity=0.287  Sum_probs=56.0

Q ss_pred             CChHHHHhhchhHHHHHHhhhhhcccCccchhhHhhhhhCCCCccchhHHHHHHHHHHHHHHHhCC
Q 018201          294 NEPLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYIVAGL  359 (359)
Q Consensus       294 NePLdkLLlnkrFRqSfmaFADSclAGE~vHFy~EV~E~~Kip~~d~vrRIYMArHIieKyivaGa  359 (359)
                      +..||++|.|+.-|+.|++|.++....|++.|+.+|.+..+.+..   ++..+|++|.++||..||
T Consensus       299 ~~sle~LL~dp~g~~~F~~FL~~e~s~EnL~Fwlave~fk~~~~~---~~~~~A~~Iy~~YI~~~S  361 (424)
T 2pbi_A          299 AFNFSELIRDPKGRQSFQYFLKKEFSGENLGFWEACEDLKYGDQS---KVKEKAEEIYKLFLAPGA  361 (424)
T ss_dssp             TTCHHHHHHSHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHSCSS---SHHHHHHHHHHHHTSTTC
T ss_pred             hcCHHHHHCCHHHHHHHHHHHHHhCChHHHHHHHHHHHHhcCCHH---HHHHHHHHHHHHHcCCCC
Confidence            467999999999999999999999999999999999998887543   356799999999998875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	359
d1dk8a_	147	a.91.1.1 (A:) Axin RGS-homologous domain {Human (H	2e-06
d1cmza_	128	a.91.1.1 (A:) Galpha interacting protein, GaIP {Hu	2e-05
d1agre_	128	a.91.1.1 (E:) Regulator of G-protein signaling 4,	3e-05
d2ik8b1	116	a.91.1.1 (B:65-180) Regulator of G-protein signali	6e-05
d2jm5a1	132	a.91.1.1 (A:3-134) Regulator of G-protein signalin	9e-05
d1fqia_	138	a.91.1.1 (A:) RGS9, RGS domain {Cow (Bos taurus) [	6e-04

>d1dk8a_ a.91.1.1 (A:) Axin RGS-homologous domain {Human (Homo sapiens) [TaxId: 9606]} Length = 147

class: All alpha proteins
fold: Regulator of G-protein signaling, RGS
superfamily: Regulator of G-protein signaling, RGS
family: Regulator of G-protein signaling, RGS
domain: Axin RGS-homologous domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.7 bits (105), Expect = 2e-06
 Identities = 15/61 (24%), Positives = 24/61 (39%), Gaps = 2/61 (3%)

Query: 297 LDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHV--RRIYMARHIIEKY 354
           L  LL ++     F  F       + + F+       K+   D    +R+ +AR I  KY
Sbjct: 16  LHSLLDDQDGISLFRTFLKQEGCADLLDFWFACTGFRKLEPCDSNEEKRLKLARAIYRKY 75

Query: 355 I 355
           I
Sbjct: 76  I 76

>d1cmza_ a.91.1.1 (A:) Galpha interacting protein, GaIP {Human (Homo sapiens) [TaxId: 9606]} Length = 128

class: All alpha proteins
fold: Regulator of G-protein signaling, RGS
superfamily: Regulator of G-protein signaling, RGS
family: Regulator of G-protein signaling, RGS
domain: Galpha interacting protein, GaIP
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.6 bits (97), Expect = 2e-05
 Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 4/71 (5%)

Query: 287 PTP--VIDPNEPLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRI 344
           P+P  V    +  DKL+ +   R  F AF  +  + E++ F+    E         V   
Sbjct: 1   PSPEEVQSWAQSFDKLMHSPAGRSVFRAFLRTEYSEENMLFWLACEELKAEANQHVVDE- 59

Query: 345 YMARHIIEKYI 355
             AR I E Y+
Sbjct: 60  -KARLIYEDYV 69

>d1agre_ a.91.1.1 (E:) Regulator of G-protein signaling 4, RGS4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 128

class: All alpha proteins
fold: Regulator of G-protein signaling, RGS
superfamily: Regulator of G-protein signaling, RGS
family: Regulator of G-protein signaling, RGS
domain: Regulator of G-protein signaling 4, RGS4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 41.1 bits (96), Expect = 3e-05
 Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 2/59 (3%)

Query: 297 LDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYI 355
           L+ L+ ++    +F AF  S  + E++ F+    E+ KI     +     A+ I  ++I
Sbjct: 13  LENLINHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSKLSP--KAKKIYNEFI 69

>d2ik8b1 a.91.1.1 (B:65-180) Regulator of G-protein signaling 16, RGS16 {Human (Homo sapiens) [TaxId: 9606]} Length = 116

class: All alpha proteins
fold: Regulator of G-protein signaling, RGS
superfamily: Regulator of G-protein signaling, RGS
family: Regulator of G-protein signaling, RGS
domain: Regulator of G-protein signaling 16, RGS16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.6 bits (92), Expect = 6e-05
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 2/59 (3%)

Query: 297 LDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYI 355
            D LL +K    +F AF  +  + E++ F+    E  KI      +    A  I E++I
Sbjct: 2   FDLLLSSKNGVAAFHAFLKTEFSEENLEFWLACEEFKKIR--SATKLASRAHQIFEEFI 58

>d2jm5a1 a.91.1.1 (A:3-134) Regulator of G-protein signaling 18, RGS18 {Human (Homo sapiens) [TaxId: 9606]} Length = 132

class: All alpha proteins
fold: Regulator of G-protein signaling, RGS
superfamily: Regulator of G-protein signaling, RGS
family: Regulator of G-protein signaling, RGS
domain: Regulator of G-protein signaling 18, RGS18
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.6 bits (92), Expect = 9e-05
 Identities = 14/62 (22%), Positives = 27/62 (43%), Gaps = 2/62 (3%)

Query: 297 LDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYIV 356
            DKLL ++   ++F  F  +  + E++ F+    +  K       +    A+ I EK+I 
Sbjct: 13  FDKLLSHRDGLEAFTRFLKTEFSEENIEFWIACEDFKKS--KGPQQIHLKAKAIYEKFIQ 70

Query: 357 AG 358
             
Sbjct: 71  TD 72

>d1fqia_ a.91.1.1 (A:) RGS9, RGS domain {Cow (Bos taurus) [TaxId: 9913]} Length = 138

class: All alpha proteins
fold: Regulator of G-protein signaling, RGS
superfamily: Regulator of G-protein signaling, RGS
family: Regulator of G-protein signaling, RGS
domain: RGS9, RGS domain
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 37.3 bits (86), Expect = 6e-04
 Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 3/59 (5%)

Query: 297 LDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYI 355
             +L+ + K RQSF  F     +GE++ F+E   +       D  +    A  I + ++
Sbjct: 18  FSELIRDPKGRQSFQHFLRKEFSGENLGFWEACEDLKY---GDQSKVKEKAEEIYKLFL 73

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	359
d2ik8b1	116	Regulator of G-protein signaling 16, RGS16 {Human	98.04
d1cmza_	128	Galpha interacting protein, GaIP {Human (Homo sapi	97.72
d1agre_	128	Regulator of G-protein signaling 4, RGS4 {Rat (Rat	97.63
d2jm5a1	132	Regulator of G-protein signaling 18, RGS18 {Human	97.57
d1dk8a_	147	Axin RGS-homologous domain {Human (Homo sapiens) [	97.51
d1fqia_	138	RGS9, RGS domain {Cow (Bos taurus) [TaxId: 9913]}	97.13
d1omwa1	157	G-protein coupled receptor kinase 2, N-terminal do	96.41
d1htjf_	182	Pdz-RhoGEF RGS-like domain {Human (Homo sapiens) [	82.63

>d2ik8b1 a.91.1.1 (B:65-180) Regulator of G-protein signaling 16, RGS16 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Regulator of G-protein signaling, RGS
superfamily: Regulator of G-protein signaling, RGS
family: Regulator of G-protein signaling, RGS
domain: Regulator of G-protein signaling 16, RGS16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.04  E-value=2.4e-06  Score=63.02  Aligned_cols=61  Identities=26%  Similarity=0.356  Sum_probs=54.5

Q ss_pred             HHHHhhchhHHHHHHhhhhhcccCccchhhHhhhhhCCCCccchhHHHHHHHHHHHHHHHhCC
Q 018201          297 LDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYIVAGL  359 (359)
Q Consensus       297 LdkLLlnkrFRqSfmaFADSclAGE~vHFy~EV~E~~Kip~~d~vrRIYMArHIieKyivaGa  359 (359)
                      +|++|.|+.-++.||+|..+..++|.+.||.+|.+..+++.++  ++.-+|+.|.+||+..|+
T Consensus         2 f~~iL~d~~~~~~F~~FL~~~~~~e~L~Fw~~ve~~~~~~~~~--~~~~~a~~Iy~~yi~~~s   62 (116)
T d2ik8b1           2 FDLLLSSKNGVAAFHAFLKTEFSEENLEFWLACEEFKKIRSAT--KLASRAHQIFEEFICSEA   62 (116)
T ss_dssp             HHHHHHSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCHH--HHHHHHHHHHHHHTSTTC
T ss_pred             HHHHHcChHHHHHHHHHHhHhcCHHHHHHHHHHHHHhccCCHH--HHHHHHHHHHHHHhcCCC
Confidence            7999999999999999999999999999999999999976443  455689999999998765

>d1cmza_ a.91.1.1 (A:) Galpha interacting protein, GaIP {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Regulator of G-protein signaling, RGS
superfamily: Regulator of G-protein signaling, RGS
family: Regulator of G-protein signaling, RGS
domain: Galpha interacting protein, GaIP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=9.8e-06  Score=61.12  Aligned_cols=62  Identities=24%  Similarity=0.208  Sum_probs=54.9

Q ss_pred             hHHHHhhchhHHHHHHhhhhhcccCccchhhHhhhhhCCCCccchhHHHHHHHHHHHHHHHhCC
Q 018201          296 PLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYIVAGL  359 (359)
Q Consensus       296 PLdkLLlnkrFRqSfmaFADSclAGE~vHFy~EV~E~~Kip~~d~vrRIYMArHIieKyivaGa  359 (359)
                      -||++|.|+--++.|++|.++..++|.+.||.+|.+..+.+.++  .+.-+|+.|.+||+..|+
T Consensus        12 sl~~iL~d~~~~~~F~~fL~~~~~~e~l~Fw~~ve~fk~~~~~~--~~~~~a~~Iy~~yi~~~s   73 (128)
T d1cmza_          12 SFDKLMHSPAGRSVFRAFLRTEYSEENMLFWLACEELKAEANQH--VVDEKARLIYEDYVSILS   73 (128)
T ss_dssp             CSHHHHSSHHHHHHHHHHHHHHTCCHHHHHHHHHHHGGGTCCSH--HHHHHHHHHHHHTTTCSS
T ss_pred             CHHHHHcChHHHHHHHHHHHHhcCHHHHHHHHHHHHHHccCCHH--HHHHHHHHHHHHHhccCC
Confidence            38999999999999999999999999999999999998877554  345589999999998764

>d1agre_ a.91.1.1 (E:) Regulator of G-protein signaling 4, RGS4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: Regulator of G-protein signaling, RGS
superfamily: Regulator of G-protein signaling, RGS
family: Regulator of G-protein signaling, RGS
domain: Regulator of G-protein signaling 4, RGS4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.63  E-value=1.8e-05  Score=59.84  Aligned_cols=62  Identities=23%  Similarity=0.270  Sum_probs=55.2

Q ss_pred             hHHHHhhchhHHHHHHhhhhhcccCccchhhHhhhhhCCCCccchhHHHHHHHHHHHHHHHhCC
Q 018201          296 PLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYIVAGL  359 (359)
Q Consensus       296 PLdkLLlnkrFRqSfmaFADSclAGE~vHFy~EV~E~~Kip~~d~vrRIYMArHIieKyivaGa  359 (359)
                      -|+.+|.|+.-+..|+.|-++..++|.+.||.+|.+..+.+.++.  +.-+|+.|.+|||..||
T Consensus        12 sl~~iL~d~~~~~~F~~FL~~~~~~e~l~Fw~~ve~~k~~~~~~~--~~~~a~~Iy~~yi~~~s   73 (128)
T d1agre_          12 SLENLINHECGLAAFKAFLKSEYSEENIDFWISCEEYKKIKSPSK--LSPKAKKIYNEFISVQA   73 (128)
T ss_dssp             CHHHHHHSHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHHCCCTTT--HHHHHHHHHHHHTSTTC
T ss_pred             CHHHHHCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhccCCHHH--HHHHHHHHHHHHhCCCC
Confidence            389999999999999999999999999999999999987765543  55789999999998775

>d2jm5a1 a.91.1.1 (A:3-134) Regulator of G-protein signaling 18, RGS18 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Regulator of G-protein signaling, RGS
superfamily: Regulator of G-protein signaling, RGS
family: Regulator of G-protein signaling, RGS
domain: Regulator of G-protein signaling 18, RGS18
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.57  E-value=3.3e-05  Score=58.25  Aligned_cols=62  Identities=23%  Similarity=0.335  Sum_probs=54.4

Q ss_pred             hHHHHhhchhHHHHHHhhhhhcccCccchhhHhhhhhCCCCccchhHHHHHHHHHHHHHHHhCC
Q 018201          296 PLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYIVAGL  359 (359)
Q Consensus       296 PLdkLLlnkrFRqSfmaFADSclAGE~vHFy~EV~E~~Kip~~d~vrRIYMArHIieKyivaGa  359 (359)
                      -|+.+|.|+.-++.|++|.+++-+.|.++||.+|.+.-+..  |.-++--.|+.|.+||+..|+
T Consensus        12 sl~~iL~d~~~~~~F~~fl~~~~~~e~l~Fw~~ve~~k~~~--~~~~~~~~a~~Iy~~yi~~~s   73 (132)
T d2jm5a1          12 SFDKLLSHRDGLEAFTRFLKTEFSEENIEFWIACEDFKKSK--GPQQIHLKAKAIYEKFIQTDA   73 (132)
T ss_dssp             CHHHHHHSHHHHHHHHHHHHHTTCTTTHHHHHHHHHHHTCC--CHHHHHHHHHHHHHHTTCSSS
T ss_pred             HHHHHHcChHHHHHHHHHHhHcCCHHHHHHHHHHHHHHccC--CHHHHHHHHHHHHHHHhCCCC
Confidence            48999999999999999999999999999999999997764  444556679999999998774

>d1dk8a_ a.91.1.1 (A:) Axin RGS-homologous domain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Regulator of G-protein signaling, RGS
superfamily: Regulator of G-protein signaling, RGS
family: Regulator of G-protein signaling, RGS
domain: Axin RGS-homologous domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.51  E-value=2.7e-05  Score=59.86  Aligned_cols=64  Identities=23%  Similarity=0.287  Sum_probs=56.7

Q ss_pred             hHHHHhhchhHHHHHHhhhhhcccCccchhhHhhhhhCCCCccch--hHHHHHHHHHHHHHHHhCC
Q 018201          296 PLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDH--VRRIYMARHIIEKYIVAGL  359 (359)
Q Consensus       296 PLdkLLlnkrFRqSfmaFADSclAGE~vHFy~EV~E~~Kip~~d~--vrRIYMArHIieKyivaGa  359 (359)
                      -||.+|.|+.-++.|++|-.++.++|.+.|+.+|.+..+.+.+|.  =+|.-+|+.|.+|||..++
T Consensus        15 sl~~iL~d~~~~~~F~~FL~~~~~~e~l~Fwl~ve~~k~~~~~~~~~~~~~~~A~~Iy~~yi~~~s   80 (147)
T d1dk8a_          15 SLHSLLDDQDGISLFRTFLKQEGCADLLDFWFACTGFRKLEPCDSNEEKRLKLARAIYRKYILDNN   80 (147)
T ss_dssp             CHHHHTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHCCCCTTSHHHHHHHHHHHHHHHTSCTT
T ss_pred             hHHHHHcChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHhccCC
Confidence            389999999999999999999999999999999999998877643  3566789999999997664

>d1fqia_ a.91.1.1 (A:) RGS9, RGS domain {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: Regulator of G-protein signaling, RGS
superfamily: Regulator of G-protein signaling, RGS
family: Regulator of G-protein signaling, RGS
domain: RGS9, RGS domain
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.13  E-value=0.0002  Score=54.69  Aligned_cols=61  Identities=25%  Similarity=0.359  Sum_probs=53.3

Q ss_pred             hHHHHhhchhHHHHHHhhhhhcccCccchhhHhhhhhCCCCccchhHHHHHHHHHHHHHHHhCC
Q 018201          296 PLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYIVAGL  359 (359)
Q Consensus       296 PLdkLLlnkrFRqSfmaFADSclAGE~vHFy~EV~E~~Kip~~d~vrRIYMArHIieKyivaGa  359 (359)
                      -|+.+|.|+.-++.||+|.++..++|.++||.+|.+..+-   |.-.+--.|+.|.+||+..|+
T Consensus        17 sl~~IL~d~~~~~~F~~FL~~~~~~e~l~Fw~~ve~~k~~---~~~~~~~~a~~Iy~~yi~~~s   77 (138)
T d1fqia_          17 NFSELIRDPKGRQSFQHFLRKEFSGENLGFWEACEDLKYG---DQSKVKEKAEEIYKLFLAPGA   77 (138)
T ss_dssp             CHHHHHTSHHHHHHHHHHHHHTTCTHHHHHHHHHHHHHTS---CGGGHHHHHHHHHHHHTSTTC
T ss_pred             CHHHHHcChHHHHHHHHHHhHcCCHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHcccc
Confidence            3899999999999999999999999999999999998653   334566789999999998764

>d1omwa1 a.91.1.1 (A:29-185) G-protein coupled receptor kinase 2, N-terminal domain {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: Regulator of G-protein signaling, RGS
superfamily: Regulator of G-protein signaling, RGS
family: Regulator of G-protein signaling, RGS
domain: G-protein coupled receptor kinase 2, N-terminal domain
species: Cow (Bos taurus) [TaxId: 9913]

Probab=96.41  E-value=0.0011  Score=52.10  Aligned_cols=63  Identities=25%  Similarity=0.426  Sum_probs=54.6

Q ss_pred             ChHHHHhhchhHHHHHHhhhhhcccCc--cchhhHhhhhhCCCCccchhHHHHHHHHHHHHHHHhCC
Q 018201          295 EPLDKLLLNKKFRQSFMAFADSCLAGE--SVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYIVAGL  359 (359)
Q Consensus       295 ePLdkLLlnkrFRqSfmaFADSclAGE--~vHFy~EV~E~~Kip~~d~vrRIYMArHIieKyivaGa  359 (359)
                      -.+|+||.++-=|+-|+.|-.+-...|  .+-|+.+|.+..|++.++  .|.-+|+.|.+||+..||
T Consensus        25 ~sf~~ll~~~iG~~lFr~FL~~e~se~~~~l~Fw~a~e~yk~~~~~~--~~~~~A~~Iy~kyl~~~s   89 (157)
T d1omwa1          25 VTFEKIFSQKLGYLLFRDFCLKHLEEAKPLVEFYEEIKKYEKLETEE--ERLVCSREIFDTYIMKEL   89 (157)
T ss_dssp             CSHHHHHTSHHHHHHHHHHHHHHCTTTHHHHHHHHHHHHHHTCCSHH--HHHHHHHHHHHHHTHHHH
T ss_pred             CCHHHHHcCHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHhcCCHH--HHHHHHHHHHHHHcccCC
Confidence            378999999999999999998877755  899999999999987655  578899999999998653

>d1htjf_ a.91.1.1 (F:) Pdz-RhoGEF RGS-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Regulator of G-protein signaling, RGS
superfamily: Regulator of G-protein signaling, RGS
family: Regulator of G-protein signaling, RGS
domain: Pdz-RhoGEF RGS-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.63  E-value=0.7  Score=37.82  Aligned_cols=61  Identities=15%  Similarity=0.182  Sum_probs=53.4

Q ss_pred             hHHHHhhchhHHHHHHhhhhhcccCccchhhHhhhhhCCCCccchhHHHHHHHHHHHHHHHhCC
Q 018201          296 PLDKLLLNKKFRQSFMAFADSCLAGESVHFFEEVHEHGKIPVDDHVRRIYMARHIIEKYIVAGL  359 (359)
Q Consensus       296 PLdkLLlnkrFRqSfmaFADSclAGE~vHFy~EV~E~~Kip~~d~vrRIYMArHIieKyivaGa  359 (359)
                      -+|+||.++--++-|+.|-.|=...|++-||-.+-+..+.+..+. |+  .|.-|-++||..||
T Consensus         8 s~~~Ll~~p~~l~~F~~fL~sefs~enL~Fwl~~e~yk~~~~k~~-~~--~a~~Iy~~FL~~~A   68 (182)
T d1htjf_           8 DLEKLKSRPAHLGVFLRYIFSQADPSPLLFYLCAEVYQQASPKDS-RS--LGKDIWNIFLEKNA   68 (182)
T ss_dssp             CHHHHHHCHHHHHHHHHHHHHHSCCHHHHHHHHHHHHTTSCTTHH-HH--HHHHHHHHHTSTTC
T ss_pred             CHHHHHcChHHHHHHHHHHHHhCCchHHHHHHHHHHHhccCHHHH-HH--HHHHHHHHHcCCCC
Confidence            489999999999999999999999999999999999988776654 44  57789999998776