Citrus Sinensis ID: 018215

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------36
Protein Sequence
MAVELMMGYGCGDSFAAAVKMEENAVQEAASEGMQSIGEFIKLLSRSGQVPSEQQTQYQESTSSSPTNLEPDKEIKVAAEVAVNNFKKVISLLGRPRTGHARFRRAPVGSPPPPPPPPPQKEEKVHLQEPAGPSVQSTNHLSKEQVSAFKVYCPTPVHRLPPLPHQVHKSNPNSTVVTKSDHVPSSINFSASATNSFISSLTGTAGDTDSIQPSFSSGFQFTTPSSAGKPPLSSSSLKRKCNSMDDAALKCGSSSGRCHCSKKRKSRIKRVTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNHAFAVHDAPAAMVLESS
Secondary Structure (PSIPRED)
ccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHccccccccccccHHHHHHHHHHHHHHcHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccEEEEEEEEEEEccccccccccccEEEccccccccccccccEEEEccccccccHHHEEEcccccEEEEEEEcccccccccccccccccccccc
Coil and Loop (DISEMBL)
MAVELmmgygcgdSFAAAVKMEENAVQEAASEGMQSIGEFIKLLSrsgqvpseqqtqyqestsssptnlepdkEIKVAAEVAVNNFKKVISllgrprtgharfrrapvgspppppppppqkeekvhlqepagpsvqstnhlSKEQVSAfkvycptpvhrlpplphqvhksnpnstvvtksdhvpssinfsasatnsfissltgtagdtdsiqpsfssgfqfttpssagkpplsssslkrkcnsmddaalkcgsssgrchcskkrksrikrvtrvpaisskmadippddyswrkygqkpikgsphprgyykcssvrgcparkhveralddpMMLIVTYegdhnhafavhdapaAMVLESS
Flexible Loop (DISEMBL)
MAVELMMGYGCGDSFAAAVKMEENAVQEAASEGMQSIGEFIKLLSRSGQVPSEQQtqyqestsssptnlepDKEIKVAAEVAVNNFKKVISLLGRPRTGHARfrrapvgsppppppPPPQKEEKVHLQEPAGPSVQSTNHLSKEQVSAFKVYCPTPVHRLPPLPHQVHKSNPNSTVVTKSDHVPSSINFSASATNSFISSLTGTAGDTDSIQPSFSSGFQFTTPSSAGKPPLSSSSLKRKCNSMDDAalkcgsssgrchcskkrksrikrvtrvpaisskmadippddysWRKYGQKpikgsphprgyykcSSVRGCPARKHVERALDDPMMLIVTYEGDHNHAFAVHDAPAAMVLESS
Low Complexity Region (SEG)
MAVELMMGYGCGDSFAAAVKMEENAVQEAASEGMQSIGEFIKLLSRSGQVPseqqtqyqestsssPTNLEPDKEIKVAAEVAVNNFKKVISLLGRPRTGHARFRRAPVGSpppppppppQKEEKVHLQEPAGPSVQSTNHLSKEQVSAFKVYCPTPVHRLPPLPHQVHKSNPNSTVVTKSDHVPSSINFSASATNSFISSLTGTAGDTDSIQPSFSSGFQFTTpssagkpplsssslkRKCNSMDDAALKCGSSSGRCHCSKKRKSRIKRVTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNHAFAVHDAPAAMVLESS
Disordered region (IsUnstruct)
*****MMGYGCGDSFAAA*********************************************************KVAAEVAVNNFKKVISLLG*****************************************************AFKVYCPTPV*****************************************************************************************************************************************************GYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNHAFAVHDA*********
Disordered Region (DISOPRED)
MAVEL**GYGCGDSFAAA*KMEENAVQEAASEGMQSIGEFI****************************************AVNNFKKVISL**************************************************************************************************************************************************************************************PAISSKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNHA***************
Disordered Region (DISEMBL)
MAVELMMGYGCGDSFAAAVKMEENAVQEAASEGMQSIGEFIKLLSR************************PDKEIKVAAEVAVNNFKKVISLLGRPRTGHARFRRA*********************************HLSKEQVSAFKVYCPTPVHRLPPLPHQVHKSNPNSTVVTKSDHVPSSINFSASATNSFISSLTGTAGDTDSIQPSFSSGFQF******************KCNSMDDAALKC******************RVTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNHAFAVHDAPAAMVLESS
Disordered Region (DISPRO)
******MGYGCGDSFAAAVKMEENAVQEAASEGMQSIGEFIKLLSR**************************KEIKVAAEVAVNNFKKVISLLGRPRTGHARFRRAP**************************************************************************************************************************************************************SRIKRVTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGD*******************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAVELMMGYGCGDSFAAAVKMEENAVQEAASEGMQSIGEFIKLLSRSGQVPSEQQTQYQESTSSSPTNLEPDKEIKVAAEVAVNNFKKVISLLGRPRTGHARFRRAPVGSPPPPPPPPPQKEEKVHLQEPAGPSVQSTNHLSKEQVSAFKVYCPTPVHRLPPLPHQVHKSNPNSTVVTKSDHVPSSINFSASATNSFISSLTGTAGDTDSIQPSFSSGFQFTTPSSAGKPPLSSSSLKRKCNSMDDAALKCGSSSGRCHCSKKRKSRIKRVTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNHAFAVHDAPAAMVLESS
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	359	2.2.26 [Sep-21-2011]
Q9STX0	353	Probable WRKY transcripti	yes	no	0.869	0.883	0.527	2e-91
O22176	317	Probable WRKY transcripti	no	no	0.852	0.965	0.445	5e-66
Q9SV15	325	Probable WRKY transcripti	no	no	0.821	0.907	0.424	3e-58
O04336	380	Probable WRKY transcripti	no	no	0.423	0.4	0.639	3e-49
Q9SR07	330	Probable WRKY transcripti	no	no	0.459	0.5	0.571	2e-46
Q9SJA8	321	Probable WRKY transcripti	no	no	0.331	0.370	0.666	9e-46
Q32SG4	397	Protein WRKY1 OS=Zea mays	N/A	no	0.345	0.312	0.664	1e-45
Q93WU6	330	Probable WRKY transcripti	no	no	0.401	0.436	0.590	4e-44
O64747	427	Probable WRKY transcripti	no	no	0.259	0.217	0.540	1e-23
Q9LP56	259	Probable WRKY transcripti	no	no	0.233	0.324	0.555	3e-23

>sp|Q9STX0|WRKY7_ARATH Probable WRKY transcription factor 7 OS=Arabidopsis thaliana GN=WRKY7 PE=1 SV=1

 Score =  336 bits (861), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 199/377 (52%), Positives = 237/377 (62%), Gaps = 65/377 (17%)

Query: 1   MAVELMMG-YGCGD-------SFAAAVKMEENAVQEAASEGMQSIGEFIKLLSRSGQVPS 52
           M VELMM  Y  G        + AAA KME+ A++EAAS G+  + EF+KL+ +S Q   
Sbjct: 1   MTVELMMSSYSGGGGGGDGFPAIAAAAKMEDTALREAASAGIHGVEEFLKLIGQSQQPTE 60

Query: 53  EQQTQYQESTSSSPTNLEPDKEIKVAAEVAVNNFKKVISLLGRPRTGHARFRRAPVGSPP 112
           + QT                 EI    +VAVN+FKKVISLLGR RTGHARFRRAP  +  
Sbjct: 61  KSQT-----------------EITAVTDVAVNSFKKVISLLGRSRTGHARFRRAPASTQT 103

Query: 113 PPPPPPPQKEEKVHLQEPAGPSVQSTNHLSKEQV-------SAFKVYCPTPVHRLPPLPH 165
           P      Q        E      ++++ L+K++        SAF+VYCPTP+HR PPL H
Sbjct: 104 PFK----QTPVVEEEVEVEEKKPETSSVLTKQKTEQYHGGGSAFRVYCPTPIHRRPPLSH 159

Query: 166 Q-------VHKSNPNSTVVTKSDHVPSSINFS----ASATNSFISSLTGTAGDTDSIQPS 214
                       + +S+    ++  PS+INF+     SATNSF+SS      DTDS    
Sbjct: 160 NNNNNQNQTKNGSSSSSPPMLANGAPSTINFAPSPPVSATNSFMSS---HRCDTDSTH-- 214

Query: 215 FSSGFQFTTPS----SAGKPPLSSSSLKRKCNSMDDAALKCGSSSGRCHCSKKRKSRIKR 270
            SSGF+FT PS    S GKPPLSS+SLKR+CNS         S S RCHCSKKRKSR+KR
Sbjct: 215 MSSGFEFTNPSQLSGSRGKPPLSSASLKRRCNS---------SPSSRCHCSKKRKSRVKR 265

Query: 271 VTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDP 330
           V RVPA+SSKMADIP D++SWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDD 
Sbjct: 266 VIRVPAVSSKMADIPSDEFSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDA 325

Query: 331 MMLIVTYEGDHNHAFAV 347
           MMLIVTYEGDHNHA  +
Sbjct: 326 MMLIVTYEGDHNHALVL 342

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.
Arabidopsis thaliana (taxid: 3702)

>sp|O22176|WRK15_ARATH Probable WRKY transcription factor 15 OS=Arabidopsis thaliana GN=WRKY15 PE=2 SV=1

 Score =  251 bits (642), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 165/370 (44%), Positives = 211/370 (57%), Gaps = 64/370 (17%)

Query: 1   MAVELMMGYGCGDSFAAAVKMEENAVQEAASEGMQSIGEFIKLLSRSGQVPSEQQTQYQE 60
           MAVELM       ++ + V  +  AVQEAA+ G++SI  FI L+SR      +  +    
Sbjct: 1   MAVELMT-----RNYISGVGADSFAVQEAAASGLKSIENFIGLMSRDSFNSDQPSSSSAS 55

Query: 61  STSSSPTNLEPDKEIKVAAEVAVNNFKKVISLLGRPRTGHARFRRAPVGSPPPPPPPPPQ 120
           +++S+  +LE  +     A+ AV+ FK+VISLL R RTGHARFRRAPV    P       
Sbjct: 56  ASASAAADLESARN--TTADAAVSKFKRVISLLDRTRTGHARFRRAPVHVISP------- 106

Query: 121 KEEKVHLQE-PAGPSVQSTNHLSKEQVSAFKVYCPTPVHRLPPLPHQVHKSNPNSTVVTK 179
               V LQE P     QS      + +                      K + +S++ T 
Sbjct: 107 ----VLLQEEPKTTPFQSPLPPPPQMI---------------------RKGSFSSSMKT- 140

Query: 180 SDHVPSSINFSASATNSFISSLTGTAGDTDSI----QPSFSSGFQFTTPSSAGKPPLSSS 235
                  I+FS+      +SS+T  + +   I    +PS ++ F   T S +      S 
Sbjct: 141 -------IDFSS------LSSVTTESDNQKKIHHHQRPSETAPFASQTQSLSTTVSSFSK 187

Query: 236 SLKRKCNSMDDAALKCGS--SSGRCHCSKKRKSRIKRVTRVPAISSKMADIPPDDYSWRK 293
           S KRKCNS +    KC S  SSGRCHCSKKRK + +R+ RVPAIS+KM+D+PPDDYSWRK
Sbjct: 188 STKRKCNSENLLTGKCASASSSGRCHCSKKRKIKQRRIIRVPAISAKMSDVPPDDYSWRK 247

Query: 294 YGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNHAFAVHDAPAA 353
           YGQKPIKGSPHPRGYYKCSSVRGCPARKHVERA DD  MLIVTYEGDHNH+ +  D   A
Sbjct: 248 YGQKPIKGSPHPRGYYKCSSVRGCPARKHVERAADDSSMLIVTYEGDHNHSLSAADLAGA 307

Query: 354 ----MVLESS 359
               ++LESS
Sbjct: 308 AVADLILESS 317

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SV15|WRK11_ARATH Probable WRKY transcription factor 11 OS=Arabidopsis thaliana GN=WRKY11 PE=2 SV=2

 Score =  225 bits (574), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 149/351 (42%), Positives = 193/351 (54%), Gaps = 56/351 (15%)

Query: 1   MAVELMMGYGCGDSFAAAVKMEENAVQEAASEGMQSIGEFIKLLSRSGQVPSEQQTQYQE 60
           MAV+LM      D         + A+QEAAS+G+QS+   I++LS     P +Q      
Sbjct: 1   MAVDLMRFPKIDD---------QTAIQEAASQGLQSMEHLIRVLSNR---PEQQH----- 43

Query: 61  STSSSPTNLEPDKEIKVAAEVAVNNFKKVISLLGRPRTGHARFRRAPVGSPPPPPPPPPQ 120
                      + +     +  V+ FK VISLL R  TGHARFRR PV S         Q
Sbjct: 44  -----------NVDCSEITDFTVSKFKTVISLLNR--TGHARFRRGPVHSTSSAASQKLQ 90

Query: 121 KEEKVHLQEPAGPSVQST-NHLSKEQVSAFKVYCPTPVHRLPPLPHQVHKSNPN--STVV 177
             + V   +P  P V++T NH               P    PP    +  S P+   T  
Sbjct: 91  -SQIVKNTQPEAPIVRTTTNH---------------PQIVPPPSSVTLDFSKPSIFGTKA 134

Query: 178 TKSDHVPSSINFSASATNSFISS-LTGTAGDTDSIQPSFSSGFQFTTPSSAGKPPLSSSS 236
             ++   S  NFS S  +SF+SS +TG    ++     F +       +S+GKPPL+   
Sbjct: 135 KSAELEFSKENFSVSLNSSFMSSAITGDGSVSNG--KIFLASAPLQPVNSSGKPPLAGHP 192

Query: 237 LKRKC----NSMDDAALKCGSSSGRCHCSKKRKSRIKRVTRVPAISSKMADIPPDDYSWR 292
            +++C    +S   +    GS+ G+CHC K RK+R+KR  RVPAIS+K+ADIPPD+YSWR
Sbjct: 193 YRKRCLEHEHSESFSGKVSGSAYGKCHCKKSRKNRMKRTVRVPAISAKIADIPPDEYSWR 252

Query: 293 KYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNH 343
           KYGQKPIKGSPHPRGYYKCS+ RGCPARKHVERALDDP MLIVTYEG+H H
Sbjct: 253 KYGQKPIKGSPHPRGYYKCSTFRGCPARKHVERALDDPAMLIVTYEGEHRH 303

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

Arabidopsis thaliana (taxid: 3702)

>sp|O04336|WRK21_ARATH Probable WRKY transcription factor 21 OS=Arabidopsis thaliana GN=WRKY21 PE=2 SV=1

 Score =  196 bits (497), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 103/161 (63%), Positives = 120/161 (74%), Gaps = 9/161 (5%)

Query: 185 SSINFSASATNSFISSLTGTAGDTDSIQPSFSSGFQFTTPSSAGKPPLSSSSLKRKCNSM 244
           SS   + S+T SF+SSL+   G   +I+   S  F F  PSS  +  L S   KRKC   
Sbjct: 217 SSCTPTMSSTRSFVSSLS-IDGSVANIEGKNS--FHFGVPSSTDQNSLHS---KRKCPLK 270

Query: 245 DD--AALKCGSSSGRCHCSKKRKSRIKRVTRVPAISSKMADIPPDDYSWRKYGQKPIKGS 302
            D   +LKCGSSS RCHC+KKRK R++R  RVPAIS+K+ADIPPDDYSWRKYGQKPIKGS
Sbjct: 271 GDEHGSLKCGSSS-RCHCAKKRKHRVRRSIRVPAISNKVADIPPDDYSWRKYGQKPIKGS 329

Query: 303 PHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNH 343
           P+PRGYYKCSS+RGCPARKHVER L+DP MLIVTYE +HNH
Sbjct: 330 PYPRGYYKCSSMRGCPARKHVERCLEDPAMLIVTYEAEHNH 370

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SR07|WRK39_ARATH Probable WRKY transcription factor 39 OS=Arabidopsis thaliana GN=WRKY39 PE=2 SV=1

 Score =  186 bits (473), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 104/182 (57%), Positives = 124/182 (68%), Gaps = 17/182 (9%)

Query: 166 QVHKSNPNSTVVTKSDHVPSSINFSASATN---SFISSLTGTAGDTDSIQPSFSSGFQFT 222
           Q+  S  NS V  K D   SS  ++ S +N   SF+SSL+  A  TD  + SF      T
Sbjct: 153 QIAYSRSNSGVNLKFDGSGSSC-YTPSVSNGSRSFVSSLSMDASVTDYDRNSF----HLT 207

Query: 223 TPSSAGKPPLSSSSLKRKCNSMDDAALKCGSSSGRCHCSKKRKSRIKRVTRVPAISSKMA 282
                    LS  S ++    M   +LKCGS S +CHCSKKRK R+KR  +VPAIS+K+A
Sbjct: 208 G--------LSRGSDQQHTRKMCSGSLKCGSRS-KCHCSKKRKLRVKRSIKVPAISNKIA 258

Query: 283 DIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHN 342
           DIPPD+YSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVER +D+  MLIVTYEG+HN
Sbjct: 259 DIPPDEYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERCIDETSMLIVTYEGEHN 318

Query: 343 HA 344
           H+
Sbjct: 319 HS 320

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SJA8|WRK17_ARATH Probable WRKY transcription factor 17 OS=Arabidopsis thaliana GN=WRKY17 PE=2 SV=2

 Score =  184 bits (467), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 82/123 (66%), Positives = 98/123 (79%), Gaps = 4/123 (3%)

Query: 225 SSAGKPPLSSSSLKRKCNSMDDA----ALKCGSSSGRCHCSKKRKSRIKRVTRVPAISSK 280
           +S+GKPPLS    +++C   D +        GS +G+CHC K RK+R+KR  RVPA+S+K
Sbjct: 178 TSSGKPPLSGLPYRKRCFEHDHSEGFSGKISGSGNGKCHCKKSRKNRMKRTVRVPAVSAK 237

Query: 281 MADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGD 340
           +ADIPPD+YSWRKYGQKPIKGSPHPRGYYKCS+ RGCPARKHVERALDD  MLIVTYEG+
Sbjct: 238 IADIPPDEYSWRKYGQKPIKGSPHPRGYYKCSTFRGCPARKHVERALDDSTMLIVTYEGE 297

Query: 341 HNH 343
           H H
Sbjct: 298 HRH 300

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

Arabidopsis thaliana (taxid: 3702)

>sp|Q32SG4|WRKY1_MAIZE Protein WRKY1 OS=Zea mays PE=1 SV=1

 Score =  184 bits (467), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 83/125 (66%), Positives = 96/125 (76%), Gaps = 1/125 (0%)

Query: 219 FQFTTPSSAGKPPLSSSSLKRKCNSMDDAALKCGSSSGRCHCSKKRKSRIKRVTRVPAIS 278
           FQ  + S     P      +R+C   +D   +C + S RCHCSKKRK RI+R  +VPAIS
Sbjct: 266 FQLLSGSQTASTPELGLVQRRRCAGREDGTGRCATGS-RCHCSKKRKLRIRRSIKVPAIS 324

Query: 279 SKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYE 338
           +K+ADIP D++SWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVER +DDP MLIVTYE
Sbjct: 325 NKVADIPADEFSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERCVDDPSMLIVTYE 384

Query: 339 GDHNH 343
           GDHNH
Sbjct: 385 GDHNH 389

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

Zea mays (taxid: 4577)

>sp|Q93WU6|WRK74_ARATH Probable WRKY transcription factor 74 OS=Arabidopsis thaliana GN=WRKY74 PE=2 SV=2

 Score =  179 bits (453), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 91/154 (59%), Positives = 112/154 (72%), Gaps = 10/154 (6%)

Query: 191 ASATNSFISSLTGTAGDTDSIQPSFSSGFQFTTPSSAGKPPLSSSSLKRKCNSMDDAALK 250
           ++ + SF+SSL+     TD  + SF        P   G   +S  S +  C+     +LK
Sbjct: 177 SNGSRSFVSSLSMDGSVTDYDRNSF---HLIGLPQ--GSDHISQHSRRTSCS----GSLK 227

Query: 251 CGSSSGRCHCSKKRKSRIKRVTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPRGYYK 310
           CGS S +CHCSKKRK R+KR  +VPAIS+K+ADIPPD+YSWRKYGQKPIKGSPHPRGYYK
Sbjct: 228 CGSKS-KCHCSKKRKLRVKRSIKVPAISNKIADIPPDEYSWRKYGQKPIKGSPHPRGYYK 286

Query: 311 CSSVRGCPARKHVERALDDPMMLIVTYEGDHNHA 344
           CSSVRGCPARKHVER +++  MLIVTYEG+HNH+
Sbjct: 287 CSSVRGCPARKHVERCVEETSMLIVTYEGEHNHS 320

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

Arabidopsis thaliana (taxid: 3702)

>sp|O64747|WRK35_ARATH Probable WRKY transcription factor 35 OS=Arabidopsis thaliana GN=WRKY35 PE=2 SV=1

 Score =  110 bits (276), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 53/98 (54%), Positives = 72/98 (73%), Gaps = 5/98 (5%)

Query: 253 SSSGRCHCSKKRKSRIKRVTRVPA---ISSKMAD--IPPDDYSWRKYGQKPIKGSPHPRG 307
           SSS R    K+RKS+ K+V  +PA   ++S+ +   +P D ++WRKYGQKPIKGSP+PRG
Sbjct: 177 SSSPRNLGIKRRKSQAKKVVCIPAPAAMNSRSSGEVVPSDLWAWRKYGQKPIKGSPYPRG 236

Query: 308 YYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNHAF 345
           YY+CSS +GC ARK VER+  DP ML++TY  +HNH +
Sbjct: 237 YYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPW 274

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LP56|WRK65_ARATH Probable WRKY transcription factor 65 OS=Arabidopsis thaliana GN=WRKY65 PE=2 SV=1

 Score =  109 bits (273), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 50/90 (55%), Positives = 63/90 (70%), Gaps = 6/90 (6%)

Query: 262 KKRKSRIKRVTRVPAI----SSKMADIPP--DDYSWRKYGQKPIKGSPHPRGYYKCSSVR 315
           + R+S  KRV  VP      S    D  P  D ++WRKYGQKPIKGSP+PRGYY+CSS +
Sbjct: 44  RSRRSVEKRVVNVPMKEMEGSRHKGDTTPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSTK 103

Query: 316 GCPARKHVERALDDPMMLIVTYEGDHNHAF 345
           GCPARK VER+ DDP M+++TY  +HNH +
Sbjct: 104 GCPARKQVERSRDDPTMILITYTSEHNHPW 133

Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	359
224063483	358	predicted protein [Populus trichocarpa]	0.955	0.958	0.660	1e-119
259121393	357	WRKY transcription factor 14 [(Populus t	0.955	0.960	0.648	1e-117
255538212	377	WRKY transcription factor, putative [Ric	0.972	0.925	0.635	1e-115
449531009	384	PREDICTED: probable WRKY transcription f	0.958	0.895	0.598	1e-107
449447019	383	PREDICTED: probable WRKY transcription f	0.958	0.898	0.600	1e-107
156118320	354	WRKY transcription factor 2 [Solanum tub	0.966	0.980	0.592	1e-104
10798760	350	WRKY transcription factor NtEIG-D48 [Nic	0.952	0.977	0.602	1e-103
225458699	347	PREDICTED: probable WRKY transcription f	0.916	0.948	0.588	1e-103
302142277	319	unnamed protein product [Vitis vinifera]	0.880	0.990	0.588	1e-102
118488759	334	unknown [Populus trichocarpa]	0.908	0.976	0.585	1e-100

>gi|224063483|ref|XP_002301166.1| predicted protein [Populus trichocarpa] gi|222842892|gb|EEE80439.1| predicted protein [Populus trichocarpa]

 Score =  433 bits (1114), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 247/374 (66%), Positives = 281/374 (75%), Gaps = 31/374 (8%)

Query: 1   MAVELMMGYGCGDSFAAAVKMEENAVQEAASEGMQSIGEFIKLLSRSGQVPSEQQTQYQE 60
           MAVELMMGY  GD FA   KM+ENAV+EAA+ G+QS+ E IKLL +  Q+   +Q  YQE
Sbjct: 1   MAVELMMGYS-GDCFA--TKMQENAVREAAASGIQSVEEVIKLL-KQNQL---EQQHYQE 53

Query: 61  -STSSSPTNLEPDKEIKVAAEVAVNNFKKVISLLGRP-RTGHARFRRAPVGSPPPPP--- 115
            S +SS +NL  D  I    ++AVNNFKKVISLLGR  RTGHARFRRAP  +PP      
Sbjct: 54  LSAASSSSNLGTDN-IMTVTDMAVNNFKKVISLLGRTTRTGHARFRRAP-DTPPTQQQIR 111

Query: 116 PPPPQKEEKVHLQEPAGPSVQSTNHLSKEQVSAFKVYCPTPVHRLPPLPHQVHKSNPNST 175
             P  ++EK  +QEP GPSV++ N    EQ SAF+VY PTP+HRLPPLPH   + +P   
Sbjct: 112 EEPESQQEKRQVQEP-GPSVRAINSQPTEQASAFRVYQPTPIHRLPPLPHNQQQKSP--L 168

Query: 176 VVTKS-----DHVPSSINFS----ASATNSFISSLTGTAGDTDSIQPSFSSGFQFTTPSS 226
           +VTK      + +P++INFS     S+  SF+SSLTG   +TD  Q S  S F FT PS 
Sbjct: 169 LVTKKGLSDRNEIPTTINFSNSPSISSATSFMSSLTG---ETDGFQRSMPSRFHFTQPS- 224

Query: 227 AGKPPLSSSSLKRKCNSMDDAALKCGSSSGRCHCSKK-RKSRIKRVTRVPAISSKMADIP 285
           AGKPPLSSSSLKRKCNSMDDAALKCGSSSGRCHCSKK RKSR KRV RVPAIS+KMADIP
Sbjct: 225 AGKPPLSSSSLKRKCNSMDDAALKCGSSSGRCHCSKKSRKSRAKRVVRVPAISNKMADIP 284

Query: 286 PDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNHAF 345
           PDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDD MMLIVTYEG+HNH+ 
Sbjct: 285 PDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDSMMLIVTYEGEHNHSH 344

Query: 346 AVHDAPAAMVLESS 359
              DAPAA+VLESS
Sbjct: 345 PFDDAPAALVLESS 358

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|259121393|gb|ACV92016.1| WRKY transcription factor 14 [(Populus tomentosa x P. bolleana) x P. tomentosa]

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 242/373 (64%), Positives = 279/373 (74%), Gaps = 30/373 (8%)

Query: 1   MAVELMMGYGCGDSFAAAVKMEENAVQEAASEGMQSIGEFIKLLSRSGQVPSEQQTQYQE 60
           MAVELMMGY  GD FA   KM+ENAV+EAA+ G+QS+ E IKLL ++      +Q  YQE
Sbjct: 1   MAVELMMGYS-GDCFA--TKMQENAVREAAASGIQSVEEVIKLLKQN----QLEQQHYQE 53

Query: 61  -STSSSPTNLEPDKEIKVAAEVAVNNFKKVISLLGRP-RTGHARFRRAPVGSPPPPPP-- 116
            S +SS +NL  D  I    ++AVNNFKKVISLLGR  RTGHARFRRAP  +PP      
Sbjct: 54  LSAASSSSNLGTD-NIMTVTDMAVNNFKKVISLLGRTTRTGHARFRRAP-DTPPNRQQIR 111

Query: 117 -PPPQKEEKVHLQEPAGPSVQSTNHLSKEQVSAFKVYCPTPVHRLPPLPHQVHKSNPNST 175
             P  ++EK  +QEP GPSV++ N    EQ SAF+VY PTP+HRLPPLP+   + +P   
Sbjct: 112 GEPESQQEKRQVQEP-GPSVRAINSQPTEQASAFRVYQPTPIHRLPPLPNNQQQKSP--L 168

Query: 176 VVTKS-----DHVPSSINFS----ASATNSFISSLTGTAGDTDSIQPSFSSGFQFTTPSS 226
           +VTK      + +P++INFS     S+  SF+SSLTG   +TD  Q S S GF FT PS 
Sbjct: 169 LVTKKGLSDRNEIPTTINFSNSPSISSATSFMSSLTG---ETDGFQRSMSPGFHFTQPS- 224

Query: 227 AGKPPLSSSSLKRKCNSMDDAALKCGSSSGRCHCSKKRKSRIKRVTRVPAISSKMADIPP 286
           AGKPPLSSSSLKRKCNS+DDAALKCGSSSGRCHCSKKRKSR KRV RVPAIS+KM+DIPP
Sbjct: 225 AGKPPLSSSSLKRKCNSVDDAALKCGSSSGRCHCSKKRKSRAKRVIRVPAISNKMSDIPP 284

Query: 287 DDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNHAFA 346
           DDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDD MML VTYEG+HNH+  
Sbjct: 285 DDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDSMMLTVTYEGEHNHSHP 344

Query: 347 VHDAPAAMVLESS 359
             DAPA +VLESS
Sbjct: 345 FDDAPAPLVLESS 357

Source: (Populus tomentosa x P. bolleana) x P. tomentosa

Species: (Populus tomentosa x P. bolleana) x P. tomentosa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255538212|ref|XP_002510171.1| WRKY transcription factor, putative [Ricinus communis] gi|223550872|gb|EEF52358.1| WRKY transcription factor, putative [Ricinus communis]

 Score =  420 bits (1080), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 246/387 (63%), Positives = 279/387 (72%), Gaps = 38/387 (9%)

Query: 1   MAVELMMGYGCGDSFAAAVKMEENAVQEAASEGMQSIGEFIKLLSRSGQVPSEQ--QTQY 58
           MAVELMMGY  GDSFA   K++ENAV+EAA+ G+QS+ E IKLL ++      Q     +
Sbjct: 1   MAVELMMGYS-GDSFA--TKLQENAVREAATAGIQSVEEVIKLLQQNQLQQPPQYYSETF 57

Query: 59  QESTSSSPTNLEPDKEIKVAAEVAVNNFKKVISLLGRP-RTGHARFRRAPVGSPPPPP-- 115
             S++SS TN      I    + AVNNFKKVISLLGR  RTGHARFRRAPV SP  P   
Sbjct: 58  SSSSNSSDTNPPSTDNIMAVTDAAVNNFKKVISLLGRTTRTGHARFRRAPVSSPASPTQQ 117

Query: 116 --PPPPQKEEKVHLQEPAGPSVQSTNHLSKEQVSAFKVYCPTPVHRLPPLPHQVHKSNPN 173
             P PPQ+ ++V  Q+P GPS    N    EQVSAF+VY PTP+HRLPPLP+  H  + +
Sbjct: 118 EHPKPPQQHQQV--QDP-GPSAGPLNSQQSEQVSAFRVYQPTPIHRLPPLPNNHHHHHHH 174

Query: 174 ST----------VVTK------SDHVPSSINFS----ASATNSFISSLTGTAGDTDSIQP 213
                       +VTK      S+  PS INFS     SA  SF+SSLTG   +TDS+Q 
Sbjct: 175 HQHQHQQQKAPLLVTKNGFSERSEAAPS-INFSNSPSISAATSFMSSLTG---ETDSLQR 230

Query: 214 SFSSGFQFTTP-SSAGKPPLSSSSLKRKCNSMDDAALKCGSSSGRCHCSKKRKSRIKRVT 272
           S SSGFQF  P SS GKPPLSS+SLKRKCNSMDDAALKCGSSS RCHCSKKRKSR+KRV 
Sbjct: 231 SMSSGFQFANPASSVGKPPLSSTSLKRKCNSMDDAALKCGSSSSRCHCSKKRKSRVKRVI 290

Query: 273 RVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMM 332
           RVPAIS+KMADIPPDD+SWRKYGQKPIKGSPHPRGYYKCSS+RGCPARKHVERALDDPMM
Sbjct: 291 RVPAISNKMADIPPDDFSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERALDDPMM 350

Query: 333 LIVTYEGDHNHAFAVHDAPAAMVLESS 359
           LIVTYEGDHNH+ +  DA A  VLESS
Sbjct: 351 LIVTYEGDHNHSHSTADATAVRVLESS 377

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449531009|ref|XP_004172480.1| PREDICTED: probable WRKY transcription factor 7-like [Cucumis sativus]

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 239/399 (59%), Positives = 276/399 (69%), Gaps = 55/399 (13%)

Query: 1   MAVELMMGYG-CGDSFAAAVKMEENA----VQEAASEGMQSIGEFIKLLSRSGQVPSEQQ 55
           MAVEL++G+G    S      MEENA    VQEAAS G+QS+  F++L+S +    + Q 
Sbjct: 1   MAVELLVGFGDATTSNHFTPNMEENAAVSAVQEAASAGIQSVQNFLRLMSHTT---NHQH 57

Query: 56  TQYQESTSSSPTNLEPDKEIKVAAEVAVNNFKKVISLLGRPRTGHARFRRAPV------- 108
           +Q+  STSS+P N       +  A+  VN FKKVISLL R RTGHARFRRAPV       
Sbjct: 58  SQHDSSTSSTPNN-----GYQAVADSVVNKFKKVISLLDRNRTGHARFRRAPVLTTTTTT 112

Query: 109 ---GSPPPPPPPPPQKEEKVHLQEPAGPSVQSTNHLSKEQVSAFKVYCPTP--VHRLPPL 163
                PPPPP   PQ ++       + P VQ      +E VSAFKVYCPTP  V RLPPL
Sbjct: 113 TTTPPPPPPPKVKPQHQDPSSSSPISVPPVQVKK---QESVSAFKVYCPTPSSVVRLPPL 169

Query: 164 PHQ-----VHKSNP------NSTVVTKSDHV-----PSSINFSAS----ATNSFISSLTG 203
           PH       H SN        S+VV K+  V      ++INF+AS    A NS+ISSLTG
Sbjct: 170 PHNNPHQPSHPSNTFQAQQNTSSVVLKNGSVDRKDATTTINFAASPPISAANSYISSLTG 229

Query: 204 TAGDTDSIQPSFSSGFQFT---TPSSAGKPPLSSSSLKRKCNSMDDAALKCGSSSGRCHC 260
              DT+S+QPS SSGFQFT     SSAGKPPLSSSSLKRKCNSM+D+A+KCGSSSGRCHC
Sbjct: 230 ---DTESLQPSLSSGFQFTHMSQVSSAGKPPLSSSSLKRKCNSMEDSAMKCGSSSGRCHC 286

Query: 261 SKKRKSRIKRVTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPAR 320
           SKKRK+RIKRV RVPA+SSK+ADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSS+RGCPAR
Sbjct: 287 SKKRKNRIKRVIRVPAVSSKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSLRGCPAR 346

Query: 321 KHVERALDDPMMLIVTYEGDHNHAFAVHDAPAAMVLESS 359
           KHVERALDDP MLIVTYE DHNHA +  + PA +VLESS
Sbjct: 347 KHVERALDDPTMLIVTYENDHNHAHST-ETPAPLVLESS 384

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449447019|ref|XP_004141267.1| PREDICTED: probable WRKY transcription factor 7-like [Cucumis sativus] gi|315613828|gb|ADU52519.1| WRKY protein [Cucumis sativus]

 Score =  395 bits (1015), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 239/398 (60%), Positives = 276/398 (69%), Gaps = 54/398 (13%)

Query: 1   MAVELMMGYGCGD-SFAAAVKMEENA----VQEAASEGMQSIGEFIKLLSRSGQVPSEQQ 55
           MAVEL++G+G    S      MEENA    VQEAAS G+QS+  F++L+S +    + Q 
Sbjct: 1   MAVELLVGFGDATPSNHFTPNMEENAAVSAVQEAASAGIQSVQNFLRLMSHTT---NHQH 57

Query: 56  TQYQESTSSSPTNLEPDKEIKVAAEVAVNNFKKVISLLGRPRTGHARFRRAPV------- 108
           +Q+  STSS+P N       +  A+  VN FKKVISLL R RTGHARFRRAPV       
Sbjct: 58  SQHDSSTSSTPNN-----GYQAVADSVVNKFKKVISLLDRNRTGHARFRRAPVLTTTTTT 112

Query: 109 --GSPPPPPPPPPQKEEKVHLQEPAGPSVQSTNHLSKEQVSAFKVYCPTP--VHRLPPLP 164
               PPPPP   PQ ++       + P VQ      +E VSAFKVYCPTP  V RLPPLP
Sbjct: 113 TTPPPPPPPKVKPQHQDPSSSSPISVPPVQVKK---QESVSAFKVYCPTPSSVVRLPPLP 169

Query: 165 HQ-----VHKSNP------NSTVVTKSDHV-----PSSINFSAS----ATNSFISSLTGT 204
           H       H SN        S+VV K+  V      ++INF+AS    A NS+ISSLTG 
Sbjct: 170 HNNPHQPSHPSNTFQAQQNTSSVVLKNGSVDRKDATTTINFAASPPISAANSYISSLTG- 228

Query: 205 AGDTDSIQPSFSSGFQFT---TPSSAGKPPLSSSSLKRKCNSMDDAALKCGSSSGRCHCS 261
             DT+S+QPS SSGFQFT     SSAGKPPLSSSSLKRKCNSM+D+A+KCGSSSGRCHCS
Sbjct: 229 --DTESLQPSLSSGFQFTHMSQVSSAGKPPLSSSSLKRKCNSMEDSAMKCGSSSGRCHCS 286

Query: 262 KKRKSRIKRVTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARK 321
           KKRK+RIKRV RVPA+SSK+ADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSS+RGCPARK
Sbjct: 287 KKRKNRIKRVIRVPAVSSKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSLRGCPARK 346

Query: 322 HVERALDDPMMLIVTYEGDHNHAFAVHDAPAAMVLESS 359
           HVERALDDP MLIVTYE DHNHA +  + PA +VLESS
Sbjct: 347 HVERALDDPTMLIVTYENDHNHAHST-ETPAPLVLESS 383

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|156118320|gb|ABU49721.1| WRKY transcription factor 2 [Solanum tuberosum]

 Score =  383 bits (983), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 217/366 (59%), Positives = 262/366 (71%), Gaps = 19/366 (5%)

Query: 1   MAVELMMGYGCGDSFAAAVKMEENAVQEAASEGMQSIGEFIKLLSRSGQVPSEQQTQYQE 60
           MAV+LM      D+F++  KMEE AVQEAA+ G+QS+ + I+LLS+S Q   +Q+  +Q+
Sbjct: 1   MAVDLMTSGYRTDNFSS--KMEETAVQEAATAGLQSVEKLIRLLSQSHQNQRQQKPNFQD 58

Query: 61  STSSSPTNLEPDKEIKVAAEVAVNNFKKVISLLGRPRTGHARFRRAPVGSPPPPPPPPPQ 120
           S+SSS  N     + +  A+ AVN FKK ISLL + RTGHARFRR P+ SP PP P  PQ
Sbjct: 59  SSSSSLGNSSVSADYQAVADAAVNKFKKFISLLDKNRTGHARFRRGPISSPSPPLPSKPQ 118

Query: 121 KEEKVHLQEPAGPSVQSTNHLSKEQVSAFKVYCPTPVHRLPPLPHQVHKSNPNSTVVTKS 180
           +     LQ+P          + K Q S  K+YCPTP+ RLPPLPH   +   N ++  K 
Sbjct: 119 Q-----LQQPIKNQNPQIEEIEKPQTSNTKIYCPTPIQRLPPLPHHHLQLVKNGSIERK- 172

Query: 181 DHVPSSINFSA-SATNSFISSLTGTAGDTDSIQPSFSSGFQFTT---PSSAGKPPLSSSS 236
               ++INF++ S   SF+SSLTG   +T+S+Q S SSGFQ T     SSAG+PPLS+SS
Sbjct: 173 -EASTTINFASPSPATSFMSSLTG---ETESLQQSLSSGFQITNLSQVSSAGRPPLSTSS 228

Query: 237 LKRKCNSMDDAALKC---GSSSGRCHCSKKRKSRIKRVTRVPAISSKMADIPPDDYSWRK 293
            KRKC+SMDD ALKC   G SSGRCHC KKRKSR+KRV RVPAIS KMADIPPDDYSWRK
Sbjct: 229 FKRKCSSMDDTALKCSSAGGSSGRCHCPKKRKSRVKRVVRVPAISMKMADIPPDDYSWRK 288

Query: 294 YGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNHAFAVHDAPAA 353
           YGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDP MLIVTYEG+HNH+ ++ + P A
Sbjct: 289 YGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPAMLIVTYEGEHNHSHSITETPGA 348

Query: 354 MVLESS 359
            VLESS
Sbjct: 349 HVLESS 354

Source: Solanum tuberosum

Species: Solanum tuberosum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|10798760|dbj|BAB16432.1| WRKY transcription factor NtEIG-D48 [Nicotiana tabacum]

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 221/367 (60%), Positives = 266/367 (72%), Gaps = 25/367 (6%)

Query: 1   MAVELMM-GYGCGDSFAAAVKMEENAVQEAASEGMQSIGEFIKLLSRSGQVPSEQQTQYQ 59
           MAVELM  GY   DSF+   KMEENAVQEAA+ G+QS+ + I+LLS+S Q   +QQ +  
Sbjct: 1   MAVELMTSGYSRRDSFS--TKMEENAVQEAATAGLQSVEKLIRLLSQSHQNQQQQQQKLD 58

Query: 60  ESTSSSPTNLEPDKEIKVAAEVAVNNFKKVISLLGRPRTGHARFRRAPVGSPPPPPPPPP 119
           ++ S S        +    A+VAVN FKK ISLL + RTGHARFR+ P+ +P PPPP P 
Sbjct: 59  QNPSVSA-------DYTAVADVAVNKFKKFISLLDKNRTGHARFRKGPISTPLPPPPKPQ 111

Query: 120 QKEEKVHLQEPAGPSVQSTNHLSKEQVSAFKVYCPTPVHRLPPLPHQVHKSNPNSTVVTK 179
           Q+    +  +     ++ T    K Q++  K+YCPTP+ RLPPLPH   +   N ++  K
Sbjct: 112 QQRLNQNSIKNQNLQIEETE---KPQINTPKIYCPTPIQRLPPLPHNHLQLVKNGSIERK 168

Query: 180 SDHVPSSINF-SASATNSFISSLTGTAGDTDSIQPSFSSGFQFT---TPSSAGKPPLSSS 235
                ++INF SAS  NSF+SSLTG   +T+S+Q S SSGFQ T   T SSAG+PPLS+S
Sbjct: 169 ES--STTINFASASPANSFMSSLTG---ETESLQQSLSSGFQITNLSTVSSAGRPPLSTS 223

Query: 236 SLKRKCNSMDDAALKC---GSSSGRCHCSKKRKSRIKRVTRVPAISSKMADIPPDDYSWR 292
           S KRKC+SMDD ALKC   G SSGRCHC KKRKSR+KRV RVPAIS KMADIPPDDYSWR
Sbjct: 224 SFKRKCSSMDDTALKCNSAGGSSGRCHCPKKRKSRVKRVVRVPAISMKMADIPPDDYSWR 283

Query: 293 KYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNHAFAVHDAPA 352
           KYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDP MLIVTYEG+HNH+ ++ ++PA
Sbjct: 284 KYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPTMLIVTYEGEHNHSHSITESPA 343

Query: 353 AMVLESS 359
           A VLESS
Sbjct: 344 AHVLESS 350

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225458699|ref|XP_002284966.1| PREDICTED: probable WRKY transcription factor 7 [Vitis vinifera]

 Score =  380 bits (976), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 222/377 (58%), Positives = 259/377 (68%), Gaps = 48/377 (12%)

Query: 1   MAVELMMGYGCGDSFAAAVKMEENAVQEAASEGMQSIGEFIKLLSRSGQVPSEQQTQYQE 60
           MAVELMMGY   DSFAA  KME+NA+QEAAS G+QS+ + +KLLS+             +
Sbjct: 1   MAVELMMGYA-NDSFAA--KMEDNALQEAASAGIQSVEKLVKLLSQ------------CQ 45

Query: 61  STSSSPTNLEPDKEIKVAAEVAVNNFKKVISLLGRPRTGHARFRRAPVGSPPPPPPPPPQ 120
               + T+LE D +    A++AV  FK+VISLL R RTGHARFRRAP+  P  PP     
Sbjct: 46  QQKQTTTSLEIDIDCTAVADMAVTKFKRVISLLDRTRTGHARFRRAPLVPPQQPPQDTDT 105

Query: 121 KEEKVHLQEPAGPSVQSTNHLSKEQVSAFKVYCPTPVHRLPPLPHQVHKSN--------- 171
                H Q PA            +Q S  K+YCPTPVHRLPPLPH     +         
Sbjct: 106 PVPVSHHQ-PA----------EDKQTSVSKIYCPTPVHRLPPLPHNHQPHHHHHHHSPNL 154

Query: 172 --PNSTVVTKSDHVPSSINF----SASATNSFISSLTGTAGDTDSIQPSFSSGFQFTT-- 223
             P    + K + + ++INF    S SA NSF+SSLTG   DT+S+QPS SSGF  +   
Sbjct: 155 MLPKKVAIEKKESM-TTINFTTSHSVSAPNSFVSSLTG---DTESVQPSLSSGFHISNLS 210

Query: 224 -PSSAGKPPLSSSSLKRKCNSMDDAALKCGSSSGRCHCSKKRKSRIKRVTRVPAISSKMA 282
             SSAG+PPLSSSSLKRKC+SMDDA  KCGSS GRCHCSKKRK R+KRV RVPAIS+KMA
Sbjct: 211 QVSSAGRPPLSSSSLKRKCSSMDDAGAKCGSSFGRCHCSKKRKLRVKRVVRVPAISTKMA 270

Query: 283 DIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHN 342
           DIPPDD+SWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDP +L VTYEGDHN
Sbjct: 271 DIPPDDFSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPTVLTVTYEGDHN 330

Query: 343 HAFAVHDAPAAMVLESS 359
           H+ ++ DA AA+VLESS
Sbjct: 331 HSQSITDATAALVLESS 347

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302142277|emb|CBI19480.3| unnamed protein product [Vitis vinifera]

 Score =  377 bits (968), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 213/362 (58%), Positives = 248/362 (68%), Gaps = 46/362 (12%)

Query: 1   MAVELMMGYGCGDSFAAAVKMEENAVQEAASEGMQSIGEFIKLLSRSGQVPSEQQTQYQE 60
           MAVELMMGY   DSFAA  KME+NA+QEAAS G+QS+ + +KLLS+             +
Sbjct: 1   MAVELMMGYA-NDSFAA--KMEDNALQEAASAGIQSVEKLVKLLSQ------------CQ 45

Query: 61  STSSSPTNLEPDKEIKVAAEVAVNNFKKVISLLGRPRTGHARFRRAPVGSPPPPPPPPPQ 120
               + T+LE D +    A++AV  FK+VISLL R RTGHARFRRAP+  P  PP     
Sbjct: 46  QQKQTTTSLEIDIDCTAVADMAVTKFKRVISLLDRTRTGHARFRRAPLVPPQQPPQDTDT 105

Query: 121 KEEKVHLQEPAGPSVQSTNHLSKEQVSAFKVYCPTPVHRLPPLPHQVHKSNPNSTVVTKS 180
                H Q PA            +Q S  K+YCPTPVH        + K    +T+   +
Sbjct: 106 PVPVSHHQ-PA----------EDKQTSVSKIYCPTPVH-------PIEKKESMTTINFTT 147

Query: 181 DHVPSSINFSASATNSFISSLTGTAGDTDSIQPSFSSGFQFTT---PSSAGKPPLSSSSL 237
            H       S SA NSF+SSLTG   DT+S+QPS SSGF  +     SSAG+PPLSSSSL
Sbjct: 148 SH-------SVSAPNSFVSSLTG---DTESVQPSLSSGFHISNLSQVSSAGRPPLSSSSL 197

Query: 238 KRKCNSMDDAALKCGSSSGRCHCSKKRKSRIKRVTRVPAISSKMADIPPDDYSWRKYGQK 297
           KRKC+SMDDA  KCGSS GRCHCSKKRK R+KRV RVPAIS+KMADIPPDD+SWRKYGQK
Sbjct: 198 KRKCSSMDDAGAKCGSSFGRCHCSKKRKLRVKRVVRVPAISTKMADIPPDDFSWRKYGQK 257

Query: 298 PIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNHAFAVHDAPAAMVLE 357
           PIKGSPHPRGYYKCSSVRGCPARKHVERALDDP +L VTYEGDHNH+ ++ DA AA+VLE
Sbjct: 258 PIKGSPHPRGYYKCSSVRGCPARKHVERALDDPTVLTVTYEGDHNHSQSITDATAALVLE 317

Query: 358 SS 359
           SS
Sbjct: 318 SS 319

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118488759|gb|ABK96190.1| unknown [Populus trichocarpa]

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 215/367 (58%), Positives = 261/367 (71%), Gaps = 41/367 (11%)

Query: 1   MAVELMMGYGCGDSFAAAVKMEENAVQEAASEGMQSIGEFIKLLSRSGQVPSEQQTQYQE 60
           MAVEL+MGY   D FA   KMEENAVQEAAS G++S+ + I+LLS+  Q     Q  +Q 
Sbjct: 1   MAVELVMGYR-NDGFAITSKMEENAVQEAAS-GLESVNKLIRLLSQKNQ-----QNLHQS 53

Query: 61  STSSSPTNLEPDKEIKVAAEVAVNNFKKVISLLGRPRTGHARFRRAPVGSPPPPPPPPPQ 120
           STS+S T+++ + + K  A+ AV+ FKKVISLLGR RTGHARFRRAPV +PP        
Sbjct: 54  STSTSRTSMDMEIDCKAVADAAVSKFKKVISLLGRNRTGHARFRRAPVSTPPI------N 107

Query: 121 KEEKVHLQEPAGPSVQSTNHLSKEQVSAFKVYCPTPVHRLPP-LPHQVHK--SNPNSTVV 177
           + +++  Q P   +               KVY  TP+ ++PP + +Q H     P + V+
Sbjct: 108 QRQELSYQVPEANT---------------KVYYATPIQQIPPPVLNQNHYPILVPKNGVM 152

Query: 178 TKSDHVPSSINFS-ASATNSFISSLTGTAGDTDSIQPSFSSGFQFTTPS---SAGKPPLS 233
            + D   ++INFS +SA NSF+SSLTG   DTDS QPS SS FQFT  S   SAGKPPLS
Sbjct: 153 ERKDSATTTINFSYSSAGNSFVSSLTG---DTDSKQPSSSSAFQFTNVSQVSSAGKPPLS 209

Query: 234 SSSLKRKCNSMD-DAALKCGSSSGRCHCSKKRKSRIKRVTRVPAISSKMADIPPDDYSWR 292
           +SSLKRKC+S + D+A KCGS  GRCHCSKKRK R+KRV RVPAIS KM+DIPPDDYSWR
Sbjct: 210 TSSLKRKCSSENLDSAGKCGSP-GRCHCSKKRKMRLKRVVRVPAISLKMSDIPPDDYSWR 268

Query: 293 KYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNHAFAVHDAPA 352
           KYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDP ML+VTYEGDHNH  +V +  +
Sbjct: 269 KYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGDHNHTISVAET-S 327

Query: 353 AMVLESS 359
            ++LESS
Sbjct: 328 NLILESS 334

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	359
TAIR|locus:2135967	353	WRKY7 "WRKY DNA-binding protei	0.874	0.889	0.530	3.3e-79
TAIR|locus:2058568	317	WRKY15 "WRKY DNA-binding prote	0.568	0.643	0.509	6.8e-67
TAIR|locus:2125239	325	WRKY11 "WRKY DNA-binding prote	0.679	0.750	0.455	8.8e-55
TAIR|locus:2046653	321	WRKY17 "WRKY DNA-binding prote	0.668	0.747	0.448	3.3e-51
TAIR|locus:2064377	380	WRKY21 "WRKY DNA-binding prote	0.423	0.4	0.602	6e-50
TAIR|locus:2084943	330	WRKY39 "WRKY DNA-binding prote	0.487	0.530	0.545	2.3e-48
UNIPROTKB|Q32SG4	397	Q32SG4 "Protein WRKY1" [Zea ma	0.434	0.392	0.591	4.8e-46
TAIR|locus:2148815	330	WRKY74 "WRKY DNA-binding prote	0.685	0.745	0.431	1.9e-42
TAIR|locus:2044777	427	WRKY35 "WRKY DNA-binding prote	0.298	0.250	0.504	6.5e-24
TAIR|locus:2029919	259	WRKY65 "WRKY DNA-binding prote	0.236	0.328	0.576	1.1e-23

TAIR|locus:2135967 WRKY7 "WRKY DNA-binding protein 7" [Arabidopsis thaliana (taxid:3702)]

 Score = 796 (285.3 bits), Expect = 3.3e-79, P = 3.3e-79
 Identities = 199/375 (53%), Positives = 228/375 (60%)

Query:     1 MAVELMM-----GYGCGDSF---AAAVKMEENAVQEAASEGMQSIGEFIKLLSRSGQVPX 52
             M VELMM     G G GD F   AAA KME+ A++EAAS G+  + EF+KL+ +S Q   
Sbjct:     1 MTVELMMSSYSGGGGGGDGFPAIAAAAKMEDTALREAASAGIHGVEEFLKLIGQSQQ--- 57

Query:    53 XXXXXXXXXXXXXPTNLEPDKEIKVAAEVAVNNFKKVISLLGRPRTGHARFRRAPVGSXX 112
                          PT  +   EI    +VAVN+FKKVISLLGR RTGHARFRRAP  S  
Sbjct:    58 -------------PTE-KSQTEITAVTDVAVNSFKKVISLLGRSRTGHARFRRAPA-STQ 102

Query:   113 XXXXXXXQKEEKVHLQEPAGPSVQSTNHLSK-EQV----SAFKVYCPTPVHRLPPLPHQV 167
                      EE+V ++E   P   S     K EQ     SAF+VYCPTP+HR PPL H  
Sbjct:   103 TPFKQTPVVEEEVEVEEKK-PETSSVLTKQKTEQYHGGGSAFRVYCPTPIHRRPPLSHN- 160

Query:   168 HKSNPNSTVVTKSDH--------VPSSINFS----ASATNSFISSLTGTAGDTDSIQPSF 215
             + +N N T    S           PS+INF+     SATNSF+SS      DTDS     
Sbjct:   161 NNNNQNQTKNGSSSSSPPMLANGAPSTINFAPSPPVSATNSFMSS---HRCDTDSTH--M 215

Query:   216 SSGFQFTTXXXXXXXXXXXXXXXRKCNSMDDAALK--CGSS-SGRCHCSKKRKSRIKRVT 272
             SSGF+FT                R    +  A+LK  C SS S RCHCSKKRKSR+KRV 
Sbjct:   216 SSGFEFTNPSQLSGS--------RGKPPLSSASLKRRCNSSPSSRCHCSKKRKSRVKRVI 267

Query:   273 RVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMM 332
             RVPA+SSKMADIP D++SWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDD MM
Sbjct:   268 RVPAVSSKMADIPSDEFSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDAMM 327

Query:   333 LIVTYEGDHNHAFAV 347
             LIVTYEGDHNHA  +
Sbjct:   328 LIVTYEGDHNHALVL 342

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IC

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IDA;IPI

GO:0006457 "protein folding" evidence=RCA

GO:0006857 "oligopeptide transport" evidence=RCA

GO:0009408 "response to heat" evidence=RCA

GO:0009644 "response to high light intensity" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

GO:0042542 "response to hydrogen peroxide" evidence=RCA

TAIR|locus:2058568 WRKY15 "WRKY DNA-binding protein 15" [Arabidopsis thaliana (taxid:3702)]

 Score = 520 (188.1 bits), Expect = 6.8e-67, Sum P(2) = 6.8e-67
 Identities = 111/218 (50%), Positives = 137/218 (62%)

Query:   156 PVHRLPP-LPHQVHKSNPNSTVVTKSDHVPSSINFSASATNSFISSLTGTAGDTDSIQ-- 212
             PVH + P L  +  K+ P  + +     +    +FS+S      SSL+    ++D+ +  
Sbjct:   100 PVHVISPVLLQEEPKTTPFQSPLPPPPQMIRKGSFSSSMKTIDFSSLSSVTTESDNQKKI 159

Query:   213 -----PSFSSGFQFTTXXXXXXXXXXXXXXXRKCNSMDDAALKCGS--SSGRCHCSKKRK 265
                  PS ++ F   T               RKCNS +    KC S  SSGRCHCSKKRK
Sbjct:   160 HHHQRPSETAPFASQTQSLSTTVSSFSKSTKRKCNSENLLTGKCASASSSGRCHCSKKRK 219

Query:   266 SRIKRVTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVER 325
              + +R+ RVPAIS+KM+D+PPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVER
Sbjct:   220 IKQRRIIRVPAISAKMSDVPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVER 279

Query:   326 ALDDPMMLIVTYEGDHNHAFAVHD----APAAMVLESS 359
             A DD  MLIVTYEGDHNH+ +  D    A A ++LESS
Sbjct:   280 AADDSSMLIVTYEGDHNHSLSAADLAGAAVADLILESS 317

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IC;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IDA

GO:0010200 "response to chitin" evidence=IEP;RCA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

TAIR|locus:2125239 WRKY11 "WRKY DNA-binding protein 11" [Arabidopsis thaliana (taxid:3702)]

 Score = 517 (187.1 bits), Expect = 8.8e-55, Sum P(2) = 8.8e-55
 Identities = 124/272 (45%), Positives = 154/272 (56%)

Query:    80 EVAVNNFKKVISLLGRPRTGHARFRRAPVGSXXXXXXXXXQKEEKVHLQEPAGPSVQST- 138
             +  V+ FK VISLL R  TGHARFRR PV S         Q +   + Q P  P V++T 
Sbjct:    52 DFTVSKFKTVISLLNR--TGHARFRRGPVHSTSSAASQKLQSQIVKNTQ-PEAPIVRTTT 108

Query:   139 NHLSKEQVSAFKVYCPTPVHRLPPLPHQVHKSNPN--STVVTKSDHVPSSINFSASATNS 196
             NH    Q+         P    PP    +  S P+   T    ++   S  NFS S  +S
Sbjct:   109 NH---PQI--------VP----PPSSVTLDFSKPSIFGTKAKSAELEFSKENFSVSLNSS 153

Query:   197 FISS-LTGTAGDTDSIQPSFSSGFQFTTXXXXXXXXXXXXXXXRKC----NSMDDAALKC 251
             F+SS +TG    ++     F +                     ++C    +S   +    
Sbjct:   154 FMSSAITGDGSVSNG--KIFLASAPLQPVNSSGKPPLAGHPYRKRCLEHEHSESFSGKVS 211

Query:   252 GSSSGRCHCSKKRKSRIKRVTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKC 311
             GS+ G+CHC K RK+R+KR  RVPAIS+K+ADIPPD+YSWRKYGQKPIKGSPHPRGYYKC
Sbjct:   212 GSAYGKCHCKKSRKNRMKRTVRVPAISAKIADIPPDEYSWRKYGQKPIKGSPHPRGYYKC 271

Query:   312 SSVRGCPARKHVERALDDPMMLIVTYEGDHNH 343
             S+ RGCPARKHVERALDDP MLIVTYEG+H H
Sbjct:   272 STFRGCPARKHVERALDDPAMLIVTYEGEHRH 303

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IC

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IDA

GO:0042742 "defense response to bacterium" evidence=IEP

GO:0010200 "response to chitin" evidence=IEP;RCA

GO:0002679 "respiratory burst involved in defense response" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

TAIR|locus:2046653 WRKY17 "WRKY DNA-binding protein 17" [Arabidopsis thaliana (taxid:3702)]

 Score = 483 (175.1 bits), Expect = 3.3e-51, Sum P(2) = 3.3e-51
 Identities = 123/274 (44%), Positives = 152/274 (55%)

Query:    80 EVAVNNFKKVISLLGRPRTGHARFRRAPVGSXXXXXXXXXQKEEKVHLQEPAGPSVQSTN 139
             +  V+ FKKVISLL R  +GHARFRR PV S                   P  P V+ T 
Sbjct:    51 DFTVSKFKKVISLLNR--SGHARFRRGPVHSPPSSSV-------------P--PPVKVTT 93

Query:   140 HLSKEQVSAFKVYCPTPVHRLPPLPHQVHKSNPNSTVV---TKSDHVP--SSINFSASAT 194
               +  Q+SA     P PV  +      V       +V    TKS  V   +  +FS S+ 
Sbjct:    94 P-APTQISA-----PAPVSFVQANQQSVTLDFTRPSVFGAKTKSSEVVEFAKESFSVSSN 147

Query:   195 NSFISS-LTGTAGDTDSIQPSFSSGFQFTTXXXXXXXXXXXXXXXRKCNSMDDA---ALK 250
             +SF+SS +TG  G        F +                     ++C   D +   + K
Sbjct:   148 SSFMSSAITGD-GSVSKGSSIFLAPAPAVPVTSSGKPPLSGLPYRKRCFEHDHSEGFSGK 206

Query:   251 C-GSSSGRCHCSKKRKSRIKRVTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPRGYY 309
               GS +G+CHC K RK+R+KR  RVPA+S+K+ADIPPD+YSWRKYGQKPIKGSPHPRGYY
Sbjct:   207 ISGSGNGKCHCKKSRKNRMKRTVRVPAVSAKIADIPPDEYSWRKYGQKPIKGSPHPRGYY 266

Query:   310 KCSSVRGCPARKHVERALDDPMMLIVTYEGDHNH 343
             KCS+ RGCPARKHVERALDD  MLIVTYEG+H H
Sbjct:   267 KCSTFRGCPARKHVERALDDSTMLIVTYEGEHRH 300

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IC

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IDA

GO:0042742 "defense response to bacterium" evidence=IEP

GO:0010200 "response to chitin" evidence=IEP

GO:0006865 "amino acid transport" evidence=RCA

TAIR|locus:2064377 WRKY21 "WRKY DNA-binding protein 21" [Arabidopsis thaliana (taxid:3702)]

 Score = 473 (171.6 bits), Expect = 6.0e-50, Sum P(2) = 6.0e-50
 Identities = 97/161 (60%), Positives = 113/161 (70%)

Query:   185 SSINFSASATNSFISSLTGTAGDTDSIQPSFSSGFQFTTXXXXXXXXXXXXXXXRKCNSM 244
             SS   + S+T SF+SSL+   G   +I+   S  F F                 RKC   
Sbjct:   217 SSCTPTMSSTRSFVSSLS-IDGSVANIEGKNS--FHFGVPSSTDQNSLHSK---RKCPLK 270

Query:   245 DD--AALKCGSSSGRCHCSKKRKSRIKRVTRVPAISSKMADIPPDDYSWRKYGQKPIKGS 302
              D   +LKCGSSS RCHC+KKRK R++R  RVPAIS+K+ADIPPDDYSWRKYGQKPIKGS
Sbjct:   271 GDEHGSLKCGSSS-RCHCAKKRKHRVRRSIRVPAISNKVADIPPDDYSWRKYGQKPIKGS 329

Query:   303 PHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNH 343
             P+PRGYYKCSS+RGCPARKHVER L+DP MLIVTYE +HNH
Sbjct:   330 PYPRGYYKCSSMRGCPARKHVERCLEDPAMLIVTYEAEHNH 370

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IC

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IDA

TAIR|locus:2084943 WRKY39 "WRKY DNA-binding protein 39" [Arabidopsis thaliana (taxid:3702)]

 Score = 466 (169.1 bits), Expect = 2.3e-48, Sum P(2) = 2.3e-48
 Identities = 107/196 (54%), Positives = 125/196 (63%)

Query:   156 PVHRLP-PLPH---QVHKSNPNSTVVTKSDHVPSSINFSASATN---SFISSLTGTAGDT 208
             P  R P  L H   Q+  S  NS V  K D   SS  ++ S +N   SF+SSL+  A  T
Sbjct:   139 PPFRAPYQLIHNHQQIAYSRSNSGVNLKFDGSGSSC-YTPSVSNGSRSFVSSLSMDASVT 197

Query:   209 DSIQPSFSSGFQFTTXXXXXXXXXXXXXXXRKCNSMDDAALKCGSSSGRCHCSKKRKSRI 268
             D  + SF                       RK   M   +LKCGS S +CHCSKKRK R+
Sbjct:   198 DYDRNSFH---------LTGLSRGSDQQHTRK---MCSGSLKCGSRS-KCHCSKKRKLRV 244

Query:   269 KRVTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALD 328
             KR  +VPAIS+K+ADIPPD+YSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVER +D
Sbjct:   245 KRSIKVPAISNKIADIPPDEYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERCID 304

Query:   329 DPMMLIVTYEGDHNHA 344
             +  MLIVTYEG+HNH+
Sbjct:   305 ETSMLIVTYEGEHNHS 320

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IC

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IDA

UNIPROTKB|Q32SG4 Q32SG4 "Protein WRKY1" [Zea mays (taxid:4577)]

 Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
 Identities = 94/159 (59%), Positives = 113/159 (71%)

Query:   186 SINFSASATNSFISSLTGTAGDTDSIQPSFSSG-FQFTTXXXXXXXXXXXXXXXRKCNSM 244
             S N +AS++ SF+SSL+   G   S+  S +S  FQ  +               R+C   
Sbjct:   233 SSNCTASSSRSFLSSLS-MEGSLASLDGSRTSRPFQLLSGSQTASTPELGLVQRRRCAGR 291

Query:   245 DDAALKCGSSSGRCHCSKKRKSRIKRVTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPH 304
             +D   +C + S RCHCSKKRK RI+R  +VPAIS+K+ADIP D++SWRKYGQKPIKGSPH
Sbjct:   292 EDGTGRCATGS-RCHCSKKRKLRIRRSIKVPAISNKVADIPADEFSWRKYGQKPIKGSPH 350

Query:   305 PRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNH 343
             PRGYYKCSSVRGCPARKHVER +DDP MLIVTYEGDHNH
Sbjct:   351 PRGYYKCSSVRGCPARKHVERCVDDPSMLIVTYEGDHNH 389

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2148815 WRKY74 "WRKY DNA-binding protein 74" [Arabidopsis thaliana (taxid:3702)]

 Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
 Identities = 117/271 (43%), Positives = 146/271 (53%)

Query:    84 NNFKKVISLLGRPRTGHARFRRAPVGSXXXXXXXXXQKEEKVHLQEPAGPSVQSTNHLSK 143
             NN+K   SLL  P+  H  F  +PV S             K     PAGP      + + 
Sbjct:    65 NNYKFSSSLL--PQ--HM-FLESPVCSNNAISGCIPILAPKPLQIVPAGPPPLMLFNQNM 119

Query:   144 EQVSAFKVYCPTPVHRLPPLPHQ-VHK------SNPNSTVVTKSDHVPSSINFSASATN- 195
                 +F    P     + P P+Q +H       S   S +  K D    +  +S S +N 
Sbjct:   120 CLDKSFLELKPPSSRAVDPKPYQFIHTHQQGVYSRSKSGLNLKFDGSIGASCYSPSISNG 179

Query:   196 --SFISSLTGTAGDTDSIQPSFSSGFQFTTXXXXXXXXXXXXXXXRKCNSMDDAALKCGS 253
               SF+SSL+     TD  + SF                         C+     +LKCGS
Sbjct:   180 SRSFVSSLSMDGSVTDYDRNSFH-----LIGLPQGSDHISQHSRRTSCSG----SLKCGS 230

Query:   254 SSGRCHCSKKRKSRIKRVTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSS 313
              S +CHCSKKRK R+KR  +VPAIS+K+ADIPPD+YSWRKYGQKPIKGSPHPRGYYKCSS
Sbjct:   231 KS-KCHCSKKRKLRVKRSIKVPAISNKIADIPPDEYSWRKYGQKPIKGSPHPRGYYKCSS 289

Query:   314 VRGCPARKHVERALDDPMMLIVTYEGDHNHA 344
             VRGCPARKHVER +++  MLIVTYEG+HNH+
Sbjct:   290 VRGCPARKHVERCVEETSMLIVTYEGEHNHS 320

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM;IC

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0005516 "calmodulin binding" evidence=IDA

TAIR|locus:2044777 WRKY35 "WRKY DNA-binding protein 35" [Arabidopsis thaliana (taxid:3702)]

 Score = 276 (102.2 bits), Expect = 6.5e-24, P = 6.5e-24
 Identities = 57/113 (50%), Positives = 77/113 (68%)

Query:   253 SSSGRCHCSKKRKSRIKRVTRVPA---ISSKMAD--IPPDDYSWRKYGQKPIKGSPHPRG 307
             SSS R    K+RKS+ K+V  +PA   ++S+ +   +P D ++WRKYGQKPIKGSP+PRG
Sbjct:   177 SSSPRNLGIKRRKSQAKKVVCIPAPAAMNSRSSGEVVPSDLWAWRKYGQKPIKGSPYPRG 236

Query:   308 YYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNHAFAVH-DAPAAMVLESS 359
             YY+CSS +GC ARK VER+  DP ML++TY  +HNH +    +A A     SS
Sbjct:   237 YYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSTRSSS 289

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0009793 "embryo development ending in seed dormancy" evidence=IMP

GO:0009555 "pollen development" evidence=IMP

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2029919 WRKY65 "WRKY DNA-binding protein 65" [Arabidopsis thaliana (taxid:3702)]

 Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
 Identities = 53/92 (57%), Positives = 65/92 (70%)

Query:   259 HCSKK-RKSRIKRVTRVPAI----SSKMADI-PPDD-YSWRKYGQKPIKGSPHPRGYYKC 311
             H  K+ R+S  KRV  VP      S    D  PP D ++WRKYGQKPIKGSP+PRGYY+C
Sbjct:    40 HSPKRSRRSVEKRVVNVPMKEMEGSRHKGDTTPPSDSWAWRKYGQKPIKGSPYPRGYYRC 99

Query:   312 SSVRGCPARKHVERALDDPMMLIVTYEGDHNH 343
             SS +GCPARK VER+ DDP M+++TY  +HNH
Sbjct:   100 SSTKGCPARKQVERSRDDPTMILITYTSEHNH 131

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;ISS

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015698 "inorganic anion transport" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9STX0	WRKY7_ARATH	No assigned EC number	0.5278	0.8690	0.8838	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_Genewise1_v1.C_LG_II0718 hypothetical protein (359 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	359
smart00774	59	smart00774, WRKY, DNA binding domain	6e-36
pfam03106	60	pfam03106, WRKY, WRKY DNA -binding domain	4e-33
pfam10533	47	pfam10533, Plant_zn_clust, Plant zinc cluster doma	2e-18
PRK04596	248	PRK04596, minC, septum formation inhibitor; Review	2e-04

>gnl|CDD|214815 smart00774, WRKY, DNA binding domain

 Score =  124 bits (314), Expect = 6e-36
 Identities = 37/59 (62%), Positives = 47/59 (79%), Gaps = 1/59 (1%)

Query: 286 PDD-YSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNH 343
            DD Y WRKYGQK IKGSP+PR YY+C+  +GCPA+K V+R+ DDP ++ VTYEG+H H
Sbjct: 1   LDDGYQWRKYGQKVIKGSPYPRSYYRCTYTQGCPAKKQVQRSDDDPSVVEVTYEGEHTH 59

The WRKY domain is a DNA binding domain found in one or two copies in a superfamily of plant transcription factors. These transcription factors are involved in the regulation of various physiological programs that are unique to plants, including pathogen defense, senescence and trichome development. The domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger-like motif. It binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core is essential for function and WRKY binding. Length = 59

>gnl|CDD|145969 pfam03106, WRKY, WRKY DNA -binding domain

 Score =  116 bits (294), Expect = 4e-33
 Identities = 37/59 (62%), Positives = 47/59 (79%), Gaps = 1/59 (1%)

Query: 285 PPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNH 343
             D Y+WRKYGQKP+KGSP PR YY+C+S  GCP +K VER+ DDP ++ +TYEG+HNH
Sbjct: 1   LDDGYNWRKYGQKPVKGSPFPRSYYRCTS-PGCPVKKQVERSSDDPQIVEITYEGEHNH 58

Length = 60

>gnl|CDD|192617 pfam10533, Plant_zn_clust, Plant zinc cluster domain

 Score = 77.4 bits (191), Expect = 2e-18
 Identities = 32/47 (68%), Positives = 39/47 (82%), Gaps = 1/47 (2%)

Query: 238 KRKCNSMDDAALKCG-SSSGRCHCSKKRKSRIKRVTRVPAISSKMAD 283
           K++C+  +D+  KC  SSSGRCHCSKKRKSR+KR  RVPAISSK+AD
Sbjct: 1   KKRCSEANDSEGKCAASSSGRCHCSKKRKSRVKRTIRVPAISSKIAD 47

This zinc binding domain was identified by Babu and colleagues and found associated with the WRKY domain pfam03106. Length = 47

>gnl|CDD|235309 PRK04596, minC, septum formation inhibitor; Reviewed

 Score = 42.2 bits (99), Expect = 2e-04
 Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 3/59 (5%)

Query: 90  ISLLGRPRTGHARFRRAPVGSPPPPPPPPPQKEEKVHLQEPAGPSVQSTNHLSKEQVSA 148
           + LL + R   A++ RA V  PPPPPPPP + E    +  PA   +Q T   S +Q+ A
Sbjct: 102 LPLLAKFR---AQYERAAVSPPPPPPPPPARAEPAPPVARPAPGRMQRTAVRSGQQLYA 157

Length = 248

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	359
smart00774	59	WRKY DNA binding domain. The WRKY domain is a DNA	99.97
PF03106	60	WRKY: WRKY DNA -binding domain; InterPro: IPR00365	99.97
PF10533	47	Plant_zn_clust: Plant zinc cluster domain; InterPr	99.49
PF03101	91	FAR1: FAR1 DNA-binding domain; InterPro: IPR004330	92.61
PF04500	62	FLYWCH: FLYWCH zinc finger domain; InterPro: IPR00	92.11
PF05344	65	DUF746: Domain of Unknown Function (DUF746); Inter	90.82

>smart00774 WRKY DNA binding domain

Probab=99.97  E-value=4.7e-33  Score=212.48  Aligned_cols=59  Identities=61%  Similarity=1.207  Sum_probs=57.2

Q ss_pred             CCCCccccccCCcccCCCCCCccccccCCCCCCCcccceeecCCCCCEEEEEeeecCCC
Q 018215          285 PPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNH  343 (359)
Q Consensus       285 ~~DgysWRKYGQK~Ikgsp~PRsYYrCs~~~gC~a~K~Vqr~~dDp~~~~vTY~G~H~h  343 (359)
                      ++|||+|||||||.|+|++|||+||||++.+||+|+|+|||+++|+.||+|||+|+|||
T Consensus         1 ~~DGy~WRKYGQK~ikgs~~pRsYYrCt~~~~C~a~K~Vq~~~~d~~~~~vtY~g~H~h   59 (59)
T smart00774        1 LDDGYQWRKYGQKVIKGSPFPRSYYRCTYSQGCPAKKQVQRSDDDPSVVEVTYEGEHTH   59 (59)
T ss_pred             CCCcccccccCcEecCCCcCcceEEeccccCCCCCcccEEEECCCCCEEEEEEeeEeCC
Confidence            47999999999999999999999999998789999999999999999999999999998

The WRKY domain is a DNA binding domain found in one or two copies in a superfamily of plant transcription factors. These transcription factors are involved in the regulation of various physiological programs that are unique to plants, including pathogen defense, senescence and trichome development. The domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger-like motif. It binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core is essential for function and WRKY binding.

>PF03106 WRKY: WRKY DNA -binding domain; InterPro: IPR003657 The WRKY domain is a 60 amino acid region that is defined by the conserved amino acid sequence WRKYGQK at its N-terminal end, together with a novel zinc-finger- like motif

Probab=99.97  E-value=5.1e-33  Score=212.50  Aligned_cols=60  Identities=63%  Similarity=1.235  Sum_probs=52.0

Q ss_pred             CCCCccccccCCcccCCCCCCccccccCCCCCCCcccceeecCCCCCEEEEEeeecCCCCC
Q 018215          285 PPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNHAF  345 (359)
Q Consensus       285 ~~DgysWRKYGQK~Ikgsp~PRsYYrCs~~~gC~a~K~Vqr~~dDp~~~~vTY~G~H~h~~  345 (359)
                      ++|||+|||||||.|+|++|||+||||++ .+|+|+|+|||+.+|+.+|+|||+|+|||+.
T Consensus         1 ~~Dgy~WRKYGqK~i~g~~~pRsYYrCt~-~~C~akK~Vqr~~~d~~~~~vtY~G~H~h~k   60 (60)
T PF03106_consen    1 LDDGYRWRKYGQKNIKGSPYPRSYYRCTH-PGCPAKKQVQRSADDPNIVIVTYEGEHNHPK   60 (60)
T ss_dssp             --SSS-EEEEEEEEETTTTCEEEEEEEEC-TTEEEEEEEEEETTCCCEEEEEEES--SS--
T ss_pred             CCCCCchhhccCcccCCCceeeEeeeccc-cChhheeeEEEecCCCCEEEEEEeeeeCCCC
Confidence            47999999999999999999999999996 5999999999999999999999999999973

The WRKY domain is found in one or two copies in a superfamily of plant transcription factors involved in the regulation of various physiological programs that are unique to plants, including pathogen defence, senescence, trichome development and the biosynthesis of secondary metabolites. The WRKY domain binds specifically to the DNA sequence motif (T)(T)TGAC(C/T), which is known as the W box. The invariant TGAC core of the W box is essential for function and WRKY binding []. Some proteins known to contain a WRKY domain include Arabidopsis thaliana ZAP1 (Zinc-dependent Activator Protein-1) and AtWRKY44/TTG2, a protein involved in trichome development and anthocyanin pigmentation; and wild oat ABF1-2, two proteins involved in the gibberelic acid-induced expression of the alpha-Amy2 gene. Structural studies indicate that this domain is a four-stranded beta-sheet with a zinc binding pocket, forming a novel zinc and DNA binding structure []. The WRKYGQK residues correspond to the most N-terminal beta-strand, which enables extensive hydrophobic interactions, contributing to the structural stability of the beta-sheet.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0043565 sequence-specific DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2AYD_A 1WJ2_A 2LEX_A.

>PF10533 Plant_zn_clust: Plant zinc cluster domain; InterPro: IPR018872 This zinc binding domain is found associated with the WRKY domain IPR003657 from INTERPRO []

Probab=99.49  E-value=1.5e-14  Score=106.08  Aligned_cols=46  Identities=76%  Similarity=1.173  Sum_probs=41.6

Q ss_pred             ccccCCCCcccccc-CCCCCccccCcccccccceEEEEecccCCCCC
Q 018215          238 KRKCNSMDDAALKC-GSSSGRCHCSKKRKSRIKRVTRVPAISSKMAD  283 (359)
Q Consensus       238 krkc~~~~~~~~~~-~~~~~r~~~~KrrK~r~kr~vrvp~is~~~~d  283 (359)
                      ||+|.++++.+++| .+++|+|||+||||+|+||+||||||+++++|
T Consensus         1 krkC~~~~~~~~~~~~sssgrCHCsKkRK~RvKR~irVPAiS~K~AD   47 (47)
T PF10533_consen    1 KRKCHSHNDSSGKCKCSSSGRCHCSKKRKSRVKRTIRVPAISSKIAD   47 (47)
T ss_pred             CCcccccCcccCccccCCCCcccCCCcccccceeeEEeecccccccC
Confidence            67999998887887 46789999999999999999999999999986

>PF03101 FAR1: FAR1 DNA-binding domain; InterPro: IPR004330 Phytochrome A is the primary photoreceptor for mediating various far-red light-induced responses in higher plants

Probab=92.61  E-value=0.1  Score=41.29  Aligned_cols=32  Identities=31%  Similarity=0.538  Sum_probs=27.1

Q ss_pred             CCCCCcccceeecCCCCCEEEEEeeecCCCCCC
Q 018215          314 VRGCPARKHVERALDDPMMLIVTYEGDHNHAFA  346 (359)
Q Consensus       314 ~~gC~a~K~Vqr~~dDp~~~~vTY~G~H~h~~~  346 (359)
                      -.||+|+=.|.+.. |....|+.+..+|||+..
T Consensus        59 ktgC~a~i~v~~~~-~~~w~v~~~~~~HNH~L~   90 (91)
T PF03101_consen   59 KTGCKARINVKRRK-DGKWRVTSFVLEHNHPLC   90 (91)
T ss_pred             ccCCCEEEEEEEcc-CCEEEEEECcCCcCCCCC
Confidence            35899999998877 777888899999999874

It has been found that the proteins governing this response, which include FAR-RED ELONGATED HYPOCOTYL3 (FHY3) and FAR-RED-IMPAIRED RESPONSE1 (FAR1), are a pair of homologous proteins sharing significant sequence homology to mutator-like transposases. These proteins appear to be novel transcription factors, which are essential for activating the expression of FHY1 and FHL (for FHY1-like) and related genes, whose products are required for light-induced phytochrome A nuclear accumulation and subsequent light responses in plants. The FRS (FAR1 Related Sequences) family of proteins share a similar domain structure to mutator-like transposases, including an N-terminal C2H2 zinc finger domain, a central putative core transposase domain, and a C-terminal SWIM motif (named after SWI2/SNF and MuDR transposases). It seems plausible that the FRS family represent transcription factors derived from mutator-like transposases [, ]. This entry represents a domain found in FAR1 and FRS proteins. It contains a WRKY like fold and is therefore most likely a zinc binding DNA-binding domain.

>PF04500 FLYWCH: FLYWCH zinc finger domain; InterPro: IPR007588 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=92.11  E-value=0.067  Score=38.88  Aligned_cols=48  Identities=29%  Similarity=0.599  Sum_probs=24.2

Q ss_pred             CCCccccccCCcccCCCCCCccccccCC--CCCCCcccceeecCCCCCEEEEEeeecCCC
Q 018215          286 PDDYSWRKYGQKPIKGSPHPRGYYKCSS--VRGCPARKHVERALDDPMMLIVTYEGDHNH  343 (359)
Q Consensus       286 ~DgysWRKYGQK~Ikgsp~PRsYYrCs~--~~gC~a~K~Vqr~~dDp~~~~vTY~G~H~h  343 (359)
                      -|||.-+++...      ....|++|+.  ..+|+|+=.+.  .++. .++. ..++|||
T Consensus        13 ~~Gy~y~~~~~~------~~~~~WrC~~~~~~~C~a~~~~~--~~~~-~~~~-~~~~HnH   62 (62)
T PF04500_consen   13 YDGYRYYFNKRN------DGKTYWRCSRRRSHGCRARLITD--AGDG-RVVR-TNGEHNH   62 (62)
T ss_dssp             ETTEEEEEEEE-------SS-EEEEEGGGTTS----EEEEE----TT-EEEE--S---SS
T ss_pred             ECCeEEECcCCC------CCcEEEEeCCCCCCCCeEEEEEE--CCCC-EEEE-CCCccCC
Confidence            488877765544      4568999995  34899988777  4444 3433 4599998

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. C2H2-type (classical) zinc fingers (Znf) were the first class to be characterised. They contain a short beta hairpin and an alpha helix (beta/beta/alpha structure), where a single zinc atom is held in place by Cys(2)His(2) (C2H2) residues in a tetrahedral array. C2H2 Znf's can be divided into three groups based on the number and pattern of fingers: triple-C2H2 (binds single ligand), multiple-adjacent-C2H2 (binds multiple ligands), and separated paired-C2H2 []. C2H2 Znf's are the most common DNA-binding motifs found in eukaryotic transcription factors, and have also been identified in prokaryotes []. Transcription factors usually contain several Znf's (each with a conserved beta/beta/alpha structure) capable of making multiple contacts along the DNA, where the C2H2 Znf motifs recognise DNA sequences by binding to the major groove of DNA via a short alpha-helix in the Znf, the Znf spanning 3-4 bases of the DNA []. C2H2 Znf's can also bind to RNA and protein targets []. This entry represents a potential FLYWCH Zn-finger domain found in a number of eukaryotic proteins. FLYWCH is a C2H2-type zinc finger characterised by five conserved hydrophobic residues, containing the conserved sequence motif: F/Y-X(n)-L-X(n)-F/Y-X(n)-WXCX(6-12)CX(17-22)HXH where X indicates any amino acid. This domain was first characterised in Drosophila Modifier of mdg4 proteins, Mod(mgd4), putative chromatin modulators involved in higher order chromatin domains. Mod(mdg4) proteins share a common N-terminal BTB/POZ domain, but differ in their C-terminal region, most containing C-terminal FLYWCH zinc finger motifs []. The FLYWCH domain in Mod(mdg4) proteins has a putative role in protein-protein interactions; for example, Mod(mdg4)-67.2 interacts with DNA-binding protein Su(Hw) via its FLYWCH domain. FLYWCH domains have been described in other proteins as well, including suppressor of killer of prune, Su(Kpn), which contains 4 terminal FLYWCH zinc finger motifs in a tandem array and a C-terminal glutathione SH-transferase (GST) domain []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 2RPR_A.

>PF05344 DUF746: Domain of Unknown Function (DUF746); InterPro: IPR008008 This is a short conserved region found in some transposons

Probab=90.82  E-value=0.36  Score=38.31  Aligned_cols=58  Identities=24%  Similarity=0.225  Sum_probs=39.1

Q ss_pred             HHHHHHHHhccCCCCCccccccccccCCCCCCCCCCchhHHHHHHHHHhhhhhhhhccCCCCCCc--cccccCCCCC
Q 018215           36 SIGEFIKLLSRSGQVPSEQQTQYQESTSSSPTNLEPDKEIKVAAEVAVNNFKKVISLLGRPRTGH--ARFRRAPVGS  110 (359)
Q Consensus        36 S~e~LI~LLSq~~q~~~~q~~~~~~~~~~~~~~~~~~~d~~~iTD~AVsKFKKVISLL~rtRTGH--ARFRR~P~~~  110 (359)
                      .+++||++||++-.   ..+  ..         .....| ..++..-|..|++-+=.||  ++||  +|+|-|=.+.
T Consensus         2 ~~~~fIrlLs~~~s---~~~--Aa---------~~lG~~-~~~v~~wv~~fR~wll~LD--PSG~~E~RVRLg~r~a   61 (65)
T PF05344_consen    2 KARAFIRLLSQQIS---VAQ--AA---------DRLGTD-PGTVRRWVRMFRQWLLQLD--PSGHWEARVRLGVRPA   61 (65)
T ss_pred             cHHHHHHHhccccc---HHH--HH---------HHHCcC-HHHHHHHHHHHHHHHHHcC--CCCChHHHhhcCCCCC
Confidence            47899999998722   111  00         011122 3455678999999999999  8999  9999876533

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	359
2ayd_A	76	Crystal Structure Of The C-Terminal Wrky Domainof A		7e-18
1wj2_A	78	Solution Structure Of The C-Terminal Wrky Domain Of		4e-17

>pdb|2AYD|A Chain A, Crystal Structure Of The C-Terminal Wrky Domainof Atwrky1, An Sa-Induced And Partially Npr1-Dependent Transcription Factor Length = 76

Iteration: 1
 Score = 87.8 bits (216), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 40/72 (55%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 272 TRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPM 331
           +R+   +  + DI  D Y WRKYGQK +KGSP+PR YY+CSS  GCP +KHVER+  D  
Sbjct: 1   SRIVVHTQTLFDIVNDGYRWRKYGQKSVKGSPYPRSYYRCSSP-GCPVKKHVERSSHDTK 59
Query: 332 MLIVTYEGDHNH 343
           +LI TYEG H+H
Sbjct: 60  LLITTYEGKHDH 71

>pdb|1WJ2|A Chain A, Solution Structure Of The C-Terminal Wrky Domain Of Atwrky4 Length = 78

Iteration: 1
 Score = 85.9 bits (211), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 37/68 (54%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 278 SSKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTY 337
           ++   D+  D Y WRKYGQK +KG+P+PR YYKC++  GC  RKHVERA  DP  ++ TY
Sbjct: 10  TTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTP-GCGVRKHVERAATDPKAVVTTY 68
Query: 338 EGDHNHAF 345
           EG HNH  
Sbjct: 69  EGKHNHDL 76
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	359
2ayd_A	76	WRKY transcription factor 1; beta strands, zinc fi	1e-35
1wj2_A	78	Probable WRKY transcription factor 4; DNA-binding	1e-34

>2ayd_A WRKY transcription factor 1; beta strands, zinc finger; 1.60A {Arabidopsis thaliana} Length = 76

 Score =  123 bits (311), Expect = 1e-35
 Identities = 40/72 (55%), Positives = 51/72 (70%), Gaps = 1/72 (1%)

Query: 272 TRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPM 331
           +R+   +  + DI  D Y WRKYGQK +KGSP+PR YY+CSS  GCP +KHVER+  D  
Sbjct: 1   SRIVVHTQTLFDIVNDGYRWRKYGQKSVKGSPYPRSYYRCSS-PGCPVKKHVERSSHDTK 59

Query: 332 MLIVTYEGDHNH 343
           +LI TYEG H+H
Sbjct: 60  LLITTYEGKHDH 71

>1wj2_A Probable WRKY transcription factor 4; DNA-binding domain, zinc-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.79.1.1 PDB: 2lex_A* Length = 78

 Score =  121 bits (304), Expect = 1e-34
 Identities = 37/74 (50%), Positives = 47/74 (63%), Gaps = 1/74 (1%)

Query: 270 RVTRVPAISSKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDD 329
                   ++   D+  D Y WRKYGQK +KG+P+PR YYKC++  GC  RKHVERA  D
Sbjct: 2   SSGSSGVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTT-PGCGVRKHVERAATD 60

Query: 330 PMMLIVTYEGDHNH 343
           P  ++ TYEG HNH
Sbjct: 61  PKAVVTTYEGKHNH 74

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	359
2ayd_A	76	WRKY transcription factor 1; beta strands, zinc fi	100.0
1wj2_A	78	Probable WRKY transcription factor 4; DNA-binding	100.0

>2ayd_A WRKY transcription factor 1; beta strands, zinc finger; 1.60A {Arabidopsis thaliana}

Probab=100.00  E-value=6.9e-35  Score=231.36  Aligned_cols=67  Identities=58%  Similarity=1.125  Sum_probs=63.6

Q ss_pred             CCCCCCCCCccccccCCcccCCCCCCccccccCCCCCCCcccceeecCCCCCEEEEEeeecCCCCCCC
Q 018215          280 KMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNHAFAV  347 (359)
Q Consensus       280 ~~~di~~DgysWRKYGQK~Ikgsp~PRsYYrCs~~~gC~a~K~Vqr~~dDp~~~~vTY~G~H~h~~~~  347 (359)
                      ...++++|||+|||||||.|||++|||+||||++ .||+|+|+|||+++||.+|+|||+|+|||+.|.
T Consensus         9 ~~~~~~~DGy~WRKYGQK~ikgs~~PRsYYrCt~-~gC~a~K~Ver~~~d~~~~~~tY~G~H~H~~p~   75 (76)
T 2ayd_A            9 TLFDIVNDGYRWRKYGQKSVKGSPYPRSYYRCSS-PGCPVKKHVERSSHDTKLLITTYEGKHDHDMPP   75 (76)
T ss_dssp             CSSSCCCCSSCEEEEEEECCTTCSSCEEEEEECS-TTCCCEEEEEECSSSTTEEEEEEESCCSSCCCC
T ss_pred             CCCCcCCCCchhhhCcccccCCCCCceeEeEcCC-CCCCceeeEEEECCCCCEEEEEEccCcCCCCCC
Confidence            3578899999999999999999999999999996 799999999999999999999999999999875

>1wj2_A Probable WRKY transcription factor 4; DNA-binding domain, zinc-binding, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.79.1.1 PDB: 2lex_A*

Probab=100.00  E-value=9.7e-35  Score=231.48  Aligned_cols=67  Identities=55%  Similarity=1.080  Sum_probs=63.5

Q ss_pred             CCCCCCCCCccccccCCcccCCCCCCccccccCCCCCCCcccceeecCCCCCEEEEEeeecCCCCCCC
Q 018215          280 KMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNHAFAV  347 (359)
Q Consensus       280 ~~~di~~DgysWRKYGQK~Ikgsp~PRsYYrCs~~~gC~a~K~Vqr~~dDp~~~~vTY~G~H~h~~~~  347 (359)
                      ...++++|||+|||||||.|||++|||+||||++ +||+|+|+|||+.+|+.+++|||+|+|||+.|.
T Consensus        12 s~~~~~dDGy~WRKYGQK~ikgs~~PRsYYrCt~-~gC~a~K~Ver~~~d~~~~~~tY~G~H~H~~p~   78 (78)
T 1wj2_A           12 SEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTT-PGCGVRKHVERAATDPKAVVTTYEGKHNHDLPA   78 (78)
T ss_dssp             CCCCCCCSSSCBCCCEEECCTTCSSCEEEEEEEC-SSCEEEEEEEEETTTTSEEEEEEESCCSSCCCC
T ss_pred             CCCCcCCCCchhhhCcccccCCCcCeeEEeecCc-CCCCcEeeEEEEcCCCCEEEEEEeeEcCCCCCC
Confidence            4568899999999999999999999999999996 899999999999999999999999999999873

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	359
d1wj2a_	71	g.79.1.1 (A:) WRKY DNA-binding protein 4 {Thale cr	3e-28

>d1wj2a_ g.79.1.1 (A:) WRKY DNA-binding protein 4 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 71

class: Small proteins
fold: WRKY DNA-binding domain
superfamily: WRKY DNA-binding domain
family: WRKY DNA-binding domain
domain: WRKY DNA-binding protein 4
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  102 bits (257), Expect = 3e-28
 Identities = 37/66 (56%), Positives = 47/66 (71%), Gaps = 1/66 (1%)

Query: 278 SSKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTY 337
           ++   D+  D Y WRKYGQK +KG+P+PR YYKC++  GC  RKHVERA  DP  ++ TY
Sbjct: 3   TTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTT-PGCGVRKHVERAATDPKAVVTTY 61

Query: 338 EGDHNH 343
           EG HNH
Sbjct: 62  EGKHNH 67

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	359
d1wj2a_	71	WRKY DNA-binding protein 4 {Thale cress (Arabidops	100.0

>d1wj2a_ g.79.1.1 (A:) WRKY DNA-binding protein 4 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: WRKY DNA-binding domain
superfamily: WRKY DNA-binding domain
family: WRKY DNA-binding domain
domain: WRKY DNA-binding protein 4
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=8.5e-35  Score=226.20  Aligned_cols=66  Identities=56%  Similarity=1.096  Sum_probs=62.7

Q ss_pred             CCCCCCCCccccccCCcccCCCCCCccccccCCCCCCCcccceeecCCCCCEEEEEeeecCCCCCCC
Q 018215          281 MADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPMMLIVTYEGDHNHAFAV  347 (359)
Q Consensus       281 ~~di~~DgysWRKYGQK~Ikgsp~PRsYYrCs~~~gC~a~K~Vqr~~dDp~~~~vTY~G~H~h~~~~  347 (359)
                      ..|+++|||.|||||||.|||++|||+||||++ .||+|+|+|||+++|+.+|+|||+|+|||+.|+
T Consensus         6 ~~~~~dDGy~WRKYGQK~ikgs~~pRsYYrCt~-~~C~a~K~Vqr~~~d~~~~~vtY~G~H~h~~Ps   71 (71)
T d1wj2a_           6 EVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTT-PGCGVRKHVERAATDPKAVVTTYEGKHNHDLPA   71 (71)
T ss_dssp             CCCCCCSSSCBCCCEEECCTTCSSCEEEEEEEC-SSCEEEEEEEEETTTTSEEEEEEESCCSSCCCC
T ss_pred             ccccCCCCcEecccCceeccCCCCceEEEEccc-cCCCCcceEEEEcCCCCEEEEEEeeEeCCCCCC
Confidence            457899999999999999999999999999995 899999999999999999999999999998874