Citrus Sinensis ID: 018246

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------36
MAKSPETEHPQKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHNIAADIELVRMDQINTAMERLAKSDVKYRFVIDVGNSKLQ
cccccccccccEEEEEEECccccccccEEEEccccccccEEEEEEEEEcccHHHHHccccccccccccccccEEEEEEEEEcccccccccccEEEEcEEEccccccHHHccccccccccccEECcccccccccccccccccEEEcccEEEEccccccccccccccccccccccHHHHccccccccEEEEEEcccHHHHHHHHHHHcccEEEEEEcccccHHHHHHHccccEEECcccHHHHHHHHccccEEEEcccccccHHHHHHccccccEEEEEcccccccccccHHHccccEEEEEccccccHHHHHHHHHHHHccccccEEEEccccHHHHHHHHHcccccEEEEEEccccccc
************AIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKE*EAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHNIAADIELVRMDQINTAMERLAKSDVKYRFVIDVGNS***
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MAKSPETEHPQKAIGWAARDNTGTFSPFHFSRRETGADDVTIKILFCGICHSDLHCARNEWGVTNYPIVPGHEIVGTVTKVGNNVSKFKEGDKVGVGVLVASCQKCESCQQGLENYCPNMILTYNSIDRDGTKTYGGYSDLIVVDQHYVLRFPDNMPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISTSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPLLGLLKVNGKLVTVGLPEKPLEVPIFALVGARRLVGGSNVGGMKETQEMLDFCAKHNIAADIELVRMDQINTAMERLAKSDVKYRFVIDVGNSKLQ

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Probable cinnamyl alcohol dehydrogenase 9 Involved in lignin biosynthesis. May catalyze the final step specific for the production of lignin monomers, like coniferyl alcohol, sinapyl alcohol and 4-coumaryl alcohol.confidentP42734
NADP-dependent alcohol dehydrogenase C probableP0A4X1
NADP-dependent alcohol dehydrogenase C probableP0A4X0

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
1.-.-.-Oxidoreductases.probable
1.1.-.-Acting on the CH-OH group of donors.probable
1.1.1.-15-hydroxyprostaglandin dehydrogenase (NAD(+)).probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1YQD, chain A
Confidence level:very confident
Coverage over the Query: 4-356
View the alignment between query and template
View the model in PyMOL