Citrus Sinensis ID: 018260


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------36
MQNAPSPSPSPTTTPLSSPTSSLSLTQTINGSHHFTIKGYSLSKGIGIGKHIASDNFSVGGYQWAIYFYPDGKNPEDNSTYVSVFIALASEGTDVRALFELTLVDQSGKGKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFRRAMLETSDFLKDDCLKINCTVGVVVSAIDCSRLHSIQVPESDIGDHFGMLLENEESSDITFNVVGEKFHAHKLVLAARSPVFETEFLDAMEEDNHEIVVTDMEPKVFKALLHFIYKDTLIEDGECSASSSSCVPSVSDTLEAKLLAAAEKYVLPRLRLMCESVLCKVISVNSVAHTLALADRHCAMDLKSVCLKFAAENLVGGLGSIENLGIKAAA
ccccccccccccccccccccccEEEEEEEEEEEEEEEcccccccccccccEEcccccccccCEEEEEEECccccccccccEEEEEEEEcccccccEEEEEEEEEcccccccccCEECcccccccccCECcccccccccccEEEEcHHcccccccccEEEEEEEEEEEEcccccccccccccccccHHHHHHHHHcccccccEEEEEccEEEEEEEEEEccccHHHHHHHccccccccccEEEccccHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHccccccccHHHHHHHHHHcccccccHHHHHHHHHccccHHHHHHHHHHHHHcHHHHHccccccccECcc
************************LTQTINGSHHFTIKGYSLSKGIGIGKHIASDNFSVGGYQWAIYFYPDGKNPEDNSTYVSVFIALASEGTDVRALFELTLVDQS******VHSHFDRSLESGPYTLKYRGSMWGYKRFFRRAMLETSDFLKDDCLKINCTVGVVVSAIDCSRLHSIQVPESDIGDHFGMLLENEESSDITFNVVGEKFHAHKLVLAARSPVFETEFLDAMEEDNHEIVVTDMEPKVFKALLHFIYKDTLIEDGECS*****CVPSVSDTLEAKLLAAAEKYVLPRLRLMCESVLCKVISVNSVAHTLALADRHCAMDLKSVCLKFAAENLVGGLGSIENLGIKA**
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MQNAPSPSPSPTTTPLSSPTSSLSLTQTINGSHHFTIKGYSLSKGIGIGKHIASDNFSVGGYQWAIYFYPDGKNPEDNSTYVSVFIALASEGTDVRALFELTLVDQSGKGKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFRRAMLETSDFLKDDCLKINCTVGVVVSAIDCSRLHSIQVPESDIGDHFGMLLENEESSDITFNVVGEKFHAHKLVLAARSPVFETEFLDAMEEDNHEIVVTDMEPKVFKALLHFIYKDTLIEDGECSASSSSCVPSVSDTLEAKLLAAAEKYVLPRLRLMCESVLCKVISVNSVAHTLALADRHCAMDLKSVCLKFAAENLVGGLGSIENLGIKAAA

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
BTB/POZ and MATH domain-containing protein 4 May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.probableQ9SRV1
Speckle-type POZ protein In complex with CUL3, involved in ubiquitination and proteasomal degradation of several substrates.probableQ7T330
Speckle-type POZ protein Inhibits IPF1/PDX1 transactivation of established target promoters, such as insulin, may be by recruiting a repressor complex. In complex with CUL3, involved in ubiquitination of BMI1, DAXX and H2AFY, and probably also in ubiquitination and proteasomal degradation of Gli2 or Gli3.probableQ0VCW1

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3HTM, chain A
Confidence level:very confident
Coverage over the Query: 179-262,278-343
View the alignment between query and template
View the model in PyMOL
Template: 3HQI, chain A
Confidence level:very confident
Coverage over the Query: 26-263,279-343
View the alignment between query and template
View the model in PyMOL