Citrus Sinensis ID: 018264

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------36
MVTIKQLEHTKSLTKSATPEQLKCSFLCFQGVKTLNYCLGNQSFFDNTSFVEPSGVPEDLSLLDALLLAQWEERMWRGCFRYDVTASEIKVISGGKKFLAQLNEKWIMDPFILNSIDQNEELLFCVTRSEKANSELIPSAAVPNDSILVIINANPIEYGHVFVVPCGSNRLYPDARSFEMIVRIAFEINNYSFRLFYDCSSPGASHVYFQACYFPDHLPVELMPIDTFFSDGQRGIYISTLIDYPIKTILFEYTYNNRIIMMEAISEICSSLREKNISYNLLISDCGKRIFLFLQKSAISGNLLAWECGGYFLFGSKYEFDQVTEEAIHKRLSAVSLNDEGFQVVKQLCCSIASKLAV
ccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccccEEEcccEEEEEEccccEEEEEEcccccccccccccccccccEEEEEEcccccccccccccccccccEEEEEEccccccccEEEEccccccccccHHHHHHHHHHHHHHccccEEEEEEccccccccEEEEEEEccccccccccccccccccccccEEEEEcccccccEEEEEEccccHHHHHHHHHHHHHHHHHcccccEEEEEEcccEEEEEEccccccccEEEEEEccEEEEccHHHHHHHcHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcc
cEEEEEcccEEEccccccHHcccccccccccccccHEEEccccccccccccccccccccHHHHHHHHHHHHHHHHHcccEEEEccccccEEcccccEEEEEEccccccccccccHccccccEEEEEEccccccEEEccccccccccEEEEEEccccccccEEEEcccccccccHHHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHEEccccccccccccccccccccccEEEEEEccccccEEEEEEccccHHHHHHHHHHHHHHHHHccccEEEEEEccccEEEEEEccHcccccHHHHHHccccccccHHHHHHccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcc
mvtikqlehtksltksatpeqlkcsfLCFQGVKtlnyclgnqsffdntsfvepsgvpedLSLLDALLLAQWEERMWrgcfrydvtASEIKVISGGKKFLAQLNEkwimdpfilnsidqNEELLFCVTRSekanselipsaavpndsiLVIInanpieyghvfvvpcgsnrlypdarSFEMIVRIAFEINNYsfrlfydcsspgashvyfqacyfpdhlpvelmpidtffsdgqrgiyistlidypiKTILFEYTYNNRIIMMEAISEICSSLREKNISYNLLISDCGKRIFLFLQKSAISGNLLAWEcggyflfgskyefdQVTEEAIHKRLsavslndeGFQVVKQLCCSIASKLAV
mvtikqlehtksltksatpeqlKCSFLCFQGVKTLNYCLGNQSFFDNTSFVEPSGVPEDLSLLDALLLAQWEERMWRGCFRYDVTASEIKVISGGKKFLAQLNEKWIMDPFILNSIDQNEELLFCVTRSEKANSELipsaavpndSILVIINANPIEYGHVFVVPCGSNRLYPDARSFEMIVRIAFEINNYSFRLFYDCSSPGASHVYFQACYFPDHLPVELMPIDTFFSDGQRGIYIstlidypikTILFEYTYNNRIIMMEAISEICSSLREKNISYNLLISDCGKRIFLFLQKSAISGNLLAWECGGYFLFGSKYEFDQVTEEAIHKRLSAVSLNDEGFQVVKQLCCSIASKLAV
MVTIKQLEHTKSLTKSATPEQLKCSFLCFQGVKTLNYCLGNQSFFDNTSFVEPSGVPEdlslldalllaQWEERMWRGCFRYDVTASEIKVISGGKKFLAQLNEKWIMDPFILNSIDQNEELLFCVTRSEKANSELIPSAAVPNDSILVIINANPIEYGHVFVVPCGSNRLYPDARSFEMIVRIAFEINNYSFRLFYDCSSPGASHVYFQACYFPDHLPVELMPIDTFFSDGQRGIYISTLIDYPIKTILFEYTYNNRIIMMEAISEICSSLREKNISYNLLISDCGKRIFLFLQKSAISGNLLAWECGGYFLFGSKYEFDQVTEEAIHKRLSAVSLNDEGFQVVKQLCCSIASKLAV
*********************LKCSFLCFQGVKTLNYCLGNQSFFDNTSFVEPSGVPEDLSLLDALLLAQWEERMWRGCFRYDVTASEIKVISGGKKFLAQLNEKWIMDPFILNSIDQNEELLFCVTRSEKANSELIPSAAVPNDSILVIINANPIEYGHVFVVPCGSNRLYPDARSFEMIVRIAFEINNYSFRLFYDCSSPGASHVYFQACYFPDHLPVELMPIDTFFSDGQRGIYISTLIDYPIKTILFEYTYNNRIIMMEAISEICSSLREKNISYNLLISDCGKRIFLFLQKSAISGNLLAWECGGYFLFGSKYEFDQVTEEAIHKRLSAVSLNDEGFQVVKQLCCSIA*****
*VTIKQLEHT*****************CFQGVKTLNYCLGNQSFF****************LLDALLLAQWEERMWRGCFRYDVTASEIKVISGGKKFLAQLNEKWIMDPFILNSIDQNEELLFCVTRSEKA***********NDSILVIINANPIEYGHVFVVPCGSNRLYPDARSFEMIVRIAFEINNYSFRLFYDCSSPGASHVYFQACYFPDHLPVELMPIDTFFSDGQRGIYISTLIDYPIKTILFEYTYNNRIIMMEAISEICSSLREKNISYNLLISDCGKRIFLFLQKSAISGNLLAWECGGYFLFGSKYEFDQVTEEAIHKRLSAVSLNDEGFQVVKQLCCSIASKLA*
MVTIKQLEHTKSLTKSATPEQLKCSFLCFQGVKTLNYCLGNQSFFDNTSFVEPSGVPEDLSLLDALLLAQWEERMWRGCFRYDVTASEIKVISGGKKFLAQLNEKWIMDPFILNSIDQNEELLFCVTRSEKANSELIPSAAVPNDSILVIINANPIEYGHVFVVPCGSNRLYPDARSFEMIVRIAFEINNYSFRLFYDCSSPGASHVYFQACYFPDHLPVELMPIDTFFSDGQRGIYISTLIDYPIKTILFEYTYNNRIIMMEAISEICSSLREKNISYNLLISDCGKRIFLFLQKSAISGNLLAWECGGYFLFGSKYEFDQVTEEAIHKRLSAVSLNDEGFQVVKQLCCSIASKLAV
MVTIKQLEHTKSLTKSATPEQLKCSFLCFQGVKTLNYCLGNQ*************VPEDLSLLDALLLAQWEERMWRGCFRYDVTASEIKVISGGKKFLAQLNEKWIMDPFILNSIDQNEELLFCVTRSEKANSELIPSAAVPNDSILVIINANPIEYGHVFVVPCGSNRLYPDARSFEMIVRIAFEINNYSFRLFYDCSSPGASHVYFQACYFPDHLPVELMPIDTFFSDGQRGIYISTLIDYPIKTILFEYTYNNRIIMMEAISEICSSLREKNISYNLLISDCGKRIFLFLQKSAISGNLLAWECGGYFLFGSKYEFDQVTEEAIHKRLSAVSLNDEGFQVVKQLCCSIASKLA*
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MVTIKQLEHTKSLTKSATPEQLKCSFLCFQGVKTLNYCLGNQSFFDNTSFVEPSGVPEDLSLLDALLLAQWEERMWRGCFRYDVTASEIKVISGGKKFLAQLNEKWIMDPFILNSIDQNEELLFCVTRSEKANSELIPSAAVPNDSILVIINANPIEYGHVFVVPCGSNRLYPDARSFEMIVRIAFEINNYSFRLFYDCSSPGASHVYFQACYFPDHLPVELMPIDTFFSDGQRGIYISTLIDYPIKTILFEYTYNNRIIMMEAISEICSSLREKNISYNLLISDCGKRIFLFLQKSAISGNLLAWECGGYFLFGSKYEFDQVTEEAIHKRLSAVSLNDEGFQVVKQLCCSIASKLAV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query358 2.2.26 [Sep-21-2011]
Q8RWE8442 GDP-L-galactose phosphory yes no 0.885 0.717 0.313 1e-38
Q9FLP9431 GDP-L-galactose phosphory no no 0.796 0.661 0.335 1e-36
Q6ZNW5385 GDP-D-glucose phosphoryla yes no 0.726 0.675 0.257 6e-16
Q3TLS3386 GDP-D-glucose phosphoryla yes no 0.712 0.660 0.271 1e-15
Q5E9T1385 GDP-D-glucose phosphoryla yes no 0.709 0.659 0.261 3e-13
Q8HXE4385 GDP-D-glucose phosphoryla N/A no 0.703 0.654 0.258 3e-13
Q0V9F1399 GDP-D-glucose phosphoryla yes no 0.796 0.714 0.228 3e-11
Q08CA1343 GDP-D-glucose phosphoryla yes no 0.689 0.720 0.239 2e-10
A8E5Y3399 GDP-D-glucose phosphoryla N/A no 0.810 0.726 0.227 1e-08
>sp|Q8RWE8|GGAP1_ARATH GDP-L-galactose phosphorylase 1 OS=Arabidopsis thaliana GN=VTC2 PE=1 SV=1 Back     alignment and function desciption
 Score =  160 bits (406), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/360 (31%), Positives = 175/360 (48%), Gaps = 43/360 (11%)

Query: 28  CFQGVKTLNYCLGNQSFFDNTSFVEPSGVPEDLSLLDALLLAQWEERMWRGCFRYDVTAS 87
           C  G +   Y   N         +    +   ++ L++L+L +WE+R  RG FRYDVTA 
Sbjct: 35  CLNGARLPLYACKNLVKSGEKLVISHEAIEPPVAFLESLVLGEWEDRFQRGLFRYDVTAC 94

Query: 88  EIKVISGGKKFLAQLNEKWIMDPF--------ILNSIDQN---------EELLFCVTRSE 130
           E KVI G   F+AQLNE   +           +L S D +         EELLF     E
Sbjct: 95  ETKVIPGKYGFVAQLNEGRHLKKRPTEFRVDKVLQSFDGSKFNFTKVGQEELLFQFEAGE 154

Query: 131 KANSELIPSAAV--PNDSILVIINANPIEYGHVFVVP----CGSNRLYPDARSFEMIVRI 184
            A  +  P   +   N   +V IN +PIEYGHV ++P    C   R+  D +S  + V +
Sbjct: 155 DAQVQFFPCMPIDPENSPSVVAINVSPIEYGHVLLIPRVLDCLPQRI--DHKSLLLAVHM 212

Query: 185 AFEINNYSFRLFYDCSSPGAS--HVYFQACYFPDHLPVELMPIDTFFSDGQRGIYISTLI 242
           A E  N  FRL Y+     A+  H++FQA Y     P+E  P     +    G+ IS L+
Sbjct: 213 AAEAANPYFRLGYNSLGAFATINHLHFQAYYLAMPFPLEKAPTKKITTT-VSGVKISELL 271

Query: 243 DYPIKTILFEYTYNNRIIMMEAISEICSSLREKNISYNLLISDCGKRIFL----FLQKSA 298
            YP++++LFE   + +  + + +S+ C  L+  NI +N+LISDCG++IFL    + +K A
Sbjct: 272 SYPVRSLLFEGGSSMQ-ELSDTVSDCCVCLQNNNIPFNILISDCGRQIFLMPQCYAEKQA 330

Query: 299 ISG----------NLLAWECGGYFLFGSKYEFDQVTEEAIHKRLSAVSLNDEGFQVVKQL 348
           +            N   WE  G+ +   K +++  +E+   + L+  SL++E F+ V  L
Sbjct: 331 LGEVSPEVLETQVNPAVWEISGHMVLKRKEDYEGASEDNAWRLLAEASLSEERFKEVTAL 390
Catalyzes a reaction of the Smirnoff-Wheeler pathway, the major route to ascorbate biosynthesis in plants. Acts as a phosphorylase rather than as a transferase. Uses preferentially GDP-L-galactose and GDP-D-glucose as substrates. Lower activity with GDP-L-fucose, very low activity with GDP-D-mannose, and no activity with UDP-D-glucose, UDP-D-galactose or ADP-D-glucose. Highly specific for inorganic phosphate as the guanylyl acceptor.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 7EC: .EC: 6EC: 9
>sp|Q9FLP9|GGAP2_ARATH GDP-L-galactose phosphorylase 2 OS=Arabidopsis thaliana GN=VTC5 PE=1 SV=1 Back     alignment and function description
>sp|Q6ZNW5|GDPP1_HUMAN GDP-D-glucose phosphorylase 1 OS=Homo sapiens GN=GDPGP1 PE=1 SV=2 Back     alignment and function description
>sp|Q3TLS3|GDPP1_MOUSE GDP-D-glucose phosphorylase 1 OS=Mus musculus GN=Gdpgp1 PE=2 SV=2 Back     alignment and function description
>sp|Q5E9T1|GDPP1_BOVIN GDP-D-glucose phosphorylase 1 OS=Bos taurus GN=GDPGP1 PE=2 SV=1 Back     alignment and function description
>sp|Q8HXE4|GDPP1_MACFA GDP-D-glucose phosphorylase 1 OS=Macaca fascicularis GN=GDPGP1 PE=2 SV=1 Back     alignment and function description
>sp|Q0V9F1|GDPP1_XENTR GDP-D-glucose phosphorylase 1 OS=Xenopus tropicalis GN=gdpgp1 PE=2 SV=1 Back     alignment and function description
>sp|Q08CA1|GDPP1_DANRE GDP-D-glucose phosphorylase 1 OS=Danio rerio GN=gdpgp1 PE=2 SV=1 Back     alignment and function description
>sp|A8E5Y3|GDPP1_XENLA GDP-D-glucose phosphorylase 1 OS=Xenopus laevis GN=gdpgp1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query358
297740843376 unnamed protein product [Vitis vinifera] 0.988 0.941 0.538 1e-106
225444061375 PREDICTED: GDP-L-galactose phosphorylase 0.988 0.944 0.539 1e-106
255564377261 conserved hypothetical protein [Ricinus 0.670 0.919 0.531 1e-67
115489538368 Os12g0612100 [Oryza sativa Japonica Grou 0.955 0.929 0.372 1e-64
326487928369 predicted protein [Hordeum vulgare subsp 0.963 0.934 0.391 1e-61
77556584342 VTC2, putative, expressed [Oryza sativa 0.882 0.923 0.354 2e-57
357156527369 PREDICTED: GDP-L-galactose phosphorylase 0.821 0.796 0.394 7e-57
218187237 918 hypothetical protein OsI_39091 [Oryza sa 0.770 0.300 0.367 7e-50
147816089289 hypothetical protein VITISV_001208 [Viti 0.539 0.667 0.5 1e-48
449444068445 PREDICTED: GDP-L-galactose phosphorylase 0.787 0.633 0.366 8e-44
>gi|297740843|emb|CBI31025.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 203/377 (53%), Positives = 259/377 (68%), Gaps = 23/377 (6%)

Query: 2   VTIKQLEHTKSLTKSATPEQLKCSFLCFQGVKTLNYCLGNQSFFDNTSFVEPSGVPED-L 60
           + +KQL+    L K ATP+Q KC    F  ++   YC  +QS  D+  F   S +P+D  
Sbjct: 1   MVVKQLKDDNFLLKCATPDQAKCPQFSFGSIQIPLYCFASQSLDDSGPFGRFSCIPDDEP 60

Query: 61  SLLDALLLAQWEERMWRGCFRYDVTASEIKVISGGKKFLAQLNEKWIMD----------- 109
           S L++LLLAQWE+RMW+G +RYDVT SEIK+I G +KFLAQLNE+W MD           
Sbjct: 61  STLESLLLAQWEDRMWKGIYRYDVTTSEIKIIGGRRKFLAQLNEEWNMDHLSDPDENEVC 120

Query: 110 ----PFILNSIDQNEELLFCVTRSEKANSELIPSAAVPNDSILVIINANPIEYGHVFVVP 165
                FI N +  +EELLFCV   EKA  ELIP+A VPN SILV+ N  P+EYGHVF+VP
Sbjct: 121 WRGDSFIFNWVKHHEELLFCVASGEKAIPELIPTAPVPNASILVLSNVTPVEYGHVFLVP 180

Query: 166 CGSNRL--YPDARSFEMIVRIAFEINNYSFRLFYDCSSPGASHVYFQACYFPDHLPVELM 223
            G   +  + DARS EM+ R+A E+NN SFR+FYDCS P AS +YFQACYF + LPVE+M
Sbjct: 181 HGFTSISQFMDARSLEMVTRVAMEVNNRSFRVFYDCSMPSAS-LYFQACYFSNPLPVEVM 239

Query: 224 PIDTFFSDGQRGIYISTLIDYPIKTILFEYTYNNRIIMMEAISEICSSLREKNISYNLLI 283
           P+ T + +G  G  I +LIDYPIK +LFE   N ++  +E ++EICS L+ KNI Y+ LI
Sbjct: 240 PVVTLWDNGLGGTRICSLIDYPIKALLFESKSNVKV-SVEVLAEICSCLQGKNIPYSFLI 298

Query: 284 SDCGKRIFLFLQKSAISGN---LLAWECGGYFLFGSKYEFDQVTEEAIHKRLSAVSLNDE 340
           SDCGKRIFLF Q+   S N   L +WEC G+F+F S+ +FDQVTEEA+ +R+   SL++ 
Sbjct: 299 SDCGKRIFLFPQQMRASANSHALSSWECSGHFVFKSRNDFDQVTEEAMLERMGTASLDEP 358

Query: 341 GFQVVKQLCCSIASKLA 357
           GFQVVKQLCCSIASKLA
Sbjct: 359 GFQVVKQLCCSIASKLA 375

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225444061|ref|XP_002263657.1| PREDICTED: GDP-L-galactose phosphorylase 1-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|255564377|ref|XP_002523185.1| conserved hypothetical protein [Ricinus communis] gi|223537592|gb|EEF39216.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|115489538|ref|NP_001067256.1| Os12g0612100 [Oryza sativa Japonica Group] gi|77556583|gb|ABA99379.1| VTC2, putative, expressed [Oryza sativa Japonica Group] gi|113649763|dbj|BAF30275.1| Os12g0612100 [Oryza sativa Japonica Group] gi|215678716|dbj|BAG95153.1| unnamed protein product [Oryza sativa Japonica Group] gi|222617464|gb|EEE53596.1| hypothetical protein OsJ_36845 [Oryza sativa Japonica Group] Back     alignment and taxonomy information
>gi|326487928|dbj|BAJ89803.1| predicted protein [Hordeum vulgare subsp. vulgare] Back     alignment and taxonomy information
>gi|77556584|gb|ABA99380.1| VTC2, putative, expressed [Oryza sativa Japonica Group] Back     alignment and taxonomy information
>gi|357156527|ref|XP_003577487.1| PREDICTED: GDP-L-galactose phosphorylase 1-like [Brachypodium distachyon] Back     alignment and taxonomy information
>gi|218187237|gb|EEC69664.1| hypothetical protein OsI_39091 [Oryza sativa Indica Group] Back     alignment and taxonomy information
>gi|147816089|emb|CAN61883.1| hypothetical protein VITISV_001208 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449444068|ref|XP_004139797.1| PREDICTED: GDP-L-galactose phosphorylase 1-like [Cucumis sativus] gi|449507444|ref|XP_004163034.1| PREDICTED: GDP-L-galactose phosphorylase 1-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query358
TAIR|locus:2116342442 VTC2 "vitamin c defective 2" [ 0.650 0.527 0.323 2.9e-36
TAIR|locus:2161620431 VTC5 "VITAMIN C DEFECTIVE 5" [ 0.650 0.540 0.323 5.3e-34
RGD|1560277385 Gdpgp1 "GDP-D-glucose phosphor 0.578 0.537 0.283 8.4e-10
UNIPROTKB|F1SJX4384 GDPGP1 "Uncharacterized protei 0.578 0.539 0.280 4.1e-09
MGI|MGI:2443429386 Gdpgp1 "GDP-D-glucose phosphor 0.575 0.533 0.293 4.1e-09
UNIPROTKB|Q6ZNW5385 GDPGP1 "GDP-D-glucose phosphor 0.575 0.535 0.277 9e-09
UNIPROTKB|Q5E9T1385 GDPGP1 "GDP-D-glucose phosphor 0.636 0.592 0.277 4.3e-08
UNIPROTKB|Q8HXE4385 GDPGP1 "GDP-D-glucose phosphor 0.575 0.535 0.264 9.5e-08
UNIPROTKB|J9NW04408 GDPGP1 "Uncharacterized protei 0.578 0.507 0.266 1.1e-07
ZFIN|ZDB-GENE-060929-280343 zgc:153343 "zgc:153343" [Danio 0.659 0.688 0.250 4.6e-07
TAIR|locus:2116342 VTC2 "vitamin c defective 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 293 (108.2 bits), Expect = 2.9e-36, Sum P(2) = 2.9e-36
 Identities = 84/260 (32%), Positives = 135/260 (51%)

Query:   111 FILNSIDQNEELLFCVTRSEKANSELIPSAAV-PNDSILVI-INANPIEYGHVFVVP--- 165
             F    + Q EELLF     E A  +  P   + P +S  V+ IN +PIEYGHV ++P   
Sbjct:   136 FNFTKVGQ-EELLFQFEAGEDAQVQFFPCMPIDPENSPSVVAINVSPIEYGHVLLIPRVL 194

Query:   166 -CGSNRLYPDARSFEMIVRIAFEINNYSFRLFYDCSSPGAS--HVYFQACYFPDHLPVEL 222
              C   R+  D +S  + V +A E  N  FRL Y+     A+  H++FQA Y     P+E 
Sbjct:   195 DCLPQRI--DHKSLLLAVHMAAEAANPYFRLGYNSLGAFATINHLHFQAYYLAMPFPLEK 252

Query:   223 MPIDTFFSDGQRGIYISTLIDYPIKTILFEYTYNNRIIMMEAISEICSSLREKNISYNLL 282
              P     +    G+ IS L+ YP++++LFE   + + +  + +S+ C  L+  NI +N+L
Sbjct:   253 APTKKITTTVS-GVKISELLSYPVRSLLFEGGSSMQELS-DTVSDCCVCLQNNNIPFNIL 310

Query:   283 ISDCGKRIFL----FLQKSA---ISGNLL-------AWECGGYFLFGSKYEFDQVTEEAI 328
             ISDCG++IFL    + +K A   +S  +L        WE  G+ +   K +++  +E+  
Sbjct:   311 ISDCGRQIFLMPQCYAEKQALGEVSPEVLETQVNPAVWEISGHMVLKRKEDYEGASEDNA 370

Query:   329 HKRLSAVSLNDEGFQVVKQL 348
              + L+  SL++E F+ V  L
Sbjct:   371 WRLLAEASLSEERFKEVTAL 390
GO:0005634 "nucleus" evidence=ISM
GO:0019853 "L-ascorbic acid biosynthetic process" evidence=IMP
GO:0009408 "response to heat" evidence=IMP
GO:0042742 "defense response to bacterium" evidence=IMP
GO:0009753 "response to jasmonic acid stimulus" evidence=IEP
GO:0008928 "mannose-1-phosphate guanylyltransferase (GDP) activity" evidence=IDA
GO:0010474 "glucose-1-phosphate guanylyltransferase (GDP) activity" evidence=IDA
GO:0010475 "galactose-1-phosphate guanylyltransferase (GDP) activity" evidence=IDA
GO:0010471 "GDP-galactose:mannose-1-phosphate guanylyltransferase activity" evidence=IDA
GO:0010472 "GDP-galactose:glucose-1-phosphate guanylyltransferase activity" evidence=IDA
GO:0010473 "GDP-galactose:myoinositol-1-phosphate guanylyltransferase activity" evidence=IDA
GO:0080046 "quercetin 4'-O-glucosyltransferase activity" evidence=IDA
GO:0080048 "GDP-D-glucose phosphorylase activity" evidence=IDA
GO:0052544 "defense response by callose deposition in cell wall" evidence=IMP
TAIR|locus:2161620 VTC5 "VITAMIN C DEFECTIVE 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
RGD|1560277 Gdpgp1 "GDP-D-glucose phosphorylase 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1SJX4 GDPGP1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:2443429 Gdpgp1 "GDP-D-glucose phosphorylase 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q6ZNW5 GDPGP1 "GDP-D-glucose phosphorylase 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q5E9T1 GDPGP1 "GDP-D-glucose phosphorylase 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q8HXE4 GDPGP1 "GDP-D-glucose phosphorylase 1" [Macaca fascicularis (taxid:9541)] Back     alignment and assigned GO terms
UNIPROTKB|J9NW04 GDPGP1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-060929-280 zgc:153343 "zgc:153343" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query358
PLN03103403 PLN03103, PLN03103, GDP-L-galactose-hexose-1-phosp 1e-113
>gnl|CDD|215577 PLN03103, PLN03103, GDP-L-galactose-hexose-1-phosphate guanyltransferase; Provisional Back     alignment and domain information 
 Score =  335 bits (862), Expect = e-113
 Identities = 142/403 (35%), Positives = 199/403 (49%), Gaps = 54/403 (13%)

Query: 1   MVTIK-------QLEHTKSLTKSATPEQLKCSFLCFQGVKTLNYCLGNQSFFDNTSFVEP 53
           M+TIK         +    L         KC   C  G K   Y     S  D+      
Sbjct: 1   MLTIKRVPTVVSNYQDDDELGGCGRNCLGKC---CLPGAKLPLYAFKKVSKDDSGKLGSF 57

Query: 54  SGVPE-DLSLLDALLLAQWEERMWRGCFRYDVTASEIKVISGGKKFLAQLNEKW------ 106
           S  PE  +S LD+LLLAQWE+RM RG FRYDVTA E KVI G   F+AQLNE        
Sbjct: 58  SSKPEPSVSFLDSLLLAQWEDRMARGLFRYDVTACETKVIPGKYGFIAQLNEGRHLKKRP 117

Query: 107 -------IMDP-----FILNSIDQNEELLFCVTRSEKANSELIPSAAVP--NDSILVIIN 152
                  ++ P     F    + Q EE+LF   + E    E  PSA +   N   +V IN
Sbjct: 118 TEFRVDKVLQPFDGKKFNFTKVGQ-EEVLFQFEQGEDDIPEFFPSAPIDASNSPNVVAIN 176

Query: 153 ANPIEYGHVFVVPCGSNRLYP---DARSFEMIVRIAFEINNYSFRLFYDCSSPGAS--HV 207
            +PIEYGHV +VP   + L P   D  SF + + +A E NN  FR+ Y+     A+  H+
Sbjct: 177 VSPIEYGHVLLVPRVLDCL-PQRIDPDSFLLALYMAAEANNPYFRVGYNSLGAFATINHL 235

Query: 208 YFQACYFPDHLPVELMPIDTFFSDGQR-GIYISTLIDYPIKTILFEYTYNNRIIMMEAIS 266
           +FQA Y  +  PVE  P         + G+ +S L+DYP++ ++FE   ++   +  +++
Sbjct: 236 HFQAYYLANPFPVEKAPTVRIPHGTAKSGVKVSELVDYPVRGLVFEGG-SDLEDLANSVA 294

Query: 267 EICSSLREKNISYNLLISDCGKRIFLFLQKSAISG--------------NLLAWECGGYF 312
           + C  L++ NI YNLLISDCGKR+FLF Q  A                 N   WE  G+ 
Sbjct: 295 DACICLQDNNIPYNLLISDCGKRVFLFPQCYAEKQALGEVSQELLDTQVNPAVWEISGHI 354

Query: 313 LFGSKYEFDQVTEEAIHKRLSAVSLNDEGFQVVKQLCCSIASK 355
           +   K ++++ TEE   + L+ VSL++E FQ VK LC + ++ 
Sbjct: 355 VLKRKEDYERATEEYAWRLLAEVSLSEERFQEVKALCFAASAA 397

Length = 403

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 358
PLN03103403 GDP-L-galactose-hexose-1-phosphate guanyltransfera 100.0
KOG2720431 consensus Predicted hydrolase (HIT family) [Genera 100.0
COG0537138 Hit Diadenosine tetraphosphate (Ap4A) hydrolase an 99.2
PRK10687119 purine nucleoside phosphoramidase; Provisional 99.19
cd01276104 PKCI_related Protein Kinase C Interacting protein 99.12
cd01278104 aprataxin_related aprataxin related: Aprataxin, a 99.08
COG4360298 APA2 ATP adenylyltransferase (5',5'''-P-1,P-4-tetr 98.91
cd01275126 FHIT FHIT (fragile histidine family): FHIT protein 98.82
cd01277103 HINT_subgroup HINT (histidine triad nucleotide-bin 98.82
PF0123098 HIT: HIT domain; InterPro: IPR001310 The Histidine 98.77
cd0046886 HIT_like HIT family: HIT (Histidine triad) protein 98.71
PRK05270493 galactose-1-phosphate uridylyltransferase; Provisi 98.58
KOG3275127 consensus Zinc-binding protein of the histidine tr 98.31
TIGR01239489 galT_2 galactose-1-phosphate uridylyltransferase, 98.27
PF11969116 DcpS_C: Scavenger mRNA decapping enzyme C-term bin 98.21
PRK11720346 galactose-1-phosphate uridylyltransferase; Provisi 97.99
TIGR00209347 galT_1 galactose-1-phosphate uridylyltransferase, 97.96
KOG3379150 consensus Diadenosine polyphosphate hydrolase and 97.82
COG4468503 GalT Galactose-1-phosphate uridyltransferase [Carb 97.65
PLN02643336 ADP-glucose phosphorylase 97.64
PF04677121 CwfJ_C_1: Protein similar to CwfJ C-terminus 1; In 97.64
cd00608329 GalT Galactose-1-phosphate uridyl transferase (Gal 97.59
PF0983062 ATP_transf: ATP adenylyltransferase; InterPro: IPR 97.55
KOG4359166 consensus Protein kinase C inhibitor-like protein 97.1
KOG2476528 consensus Uncharacterized conserved protein [Funct 96.85
cd00608329 GalT Galactose-1-phosphate uridyl transferase (Gal 96.46
COG1085338 GalT Galactose-1-phosphate uridylyltransferase [En 96.43
PLN02643336 ADP-glucose phosphorylase 95.65
PRK11720346 galactose-1-phosphate uridylyltransferase; Provisi 95.41
TIGR00209347 galT_1 galactose-1-phosphate uridylyltransferase, 94.97
KOG0562184 consensus Predicted hydrolase (HIT family) [Genera 90.52
>PLN03103 GDP-L-galactose-hexose-1-phosphate guanyltransferase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=5.7e-92  Score=696.27  Aligned_cols=337  Identities=39%  Similarity=0.583  Sum_probs=301.1

Q ss_pred             ccccCCCCcc-CcccccceeecCCccccCCCCCCCCCC-CCccchHHHHHHHHHHHHHHhCCcccccCCeeEEEecCCce
Q 018264           20 EQLKCSFLCF-QGVKTLNYCLGNQSFFDNTSFVEPSGV-PEDLSLLDALLLAQWEERMWRGCFRYDVTASEIKVISGGKK   97 (358)
Q Consensus        20 ~~~~~~~~~~-~~~~~~~y~~~~~~~~~~~~~~~~~~~-~~~~s~fd~~ll~~We~a~~~glFrY~L~~~~tK~l~G~~~   97 (358)
                      -++||.+.|+ +|+|+|||+|+..+..+.......+.. ...+|+||++|+++||++|++|+|||||++|+||+|||+||
T Consensus        23 ~~~~~~~~c~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~s~ld~~L~~~Wedr~~~GlFrY~l~~~~tkvlpG~~g  102 (403)
T PLN03103         23 CGRNCLGKCCLPGAKLPLYAFKKVSKDDSGKLGSFSSKPEPSVSFLDSLLLAQWEDRMARGLFRYDVTACETKVIPGKYG  102 (403)
T ss_pred             cchhhhhhcCCCCccCchhhhcccccccccccccccccCcCCccHHHHHHHHHHHHHHhcCCcccccccceeEEecCccc
Confidence            3568887665 999999999999987543322223333 34599999999999999999999999999999999999999


Q ss_pred             EEEEEcCccccCcc----------------CCcccc-CCCceeeeecCCCcccccccCCccc--CCCceEEEEeCcCCCC
Q 018264           98 FLAQLNEKWIMDPF----------------ILNSID-QNEELLFCVTRSEKANSELIPSAAV--PNDSILVIINANPIEY  158 (358)
Q Consensus        98 f~aQlNp~R~~~~~----------------kfnf~k-~~~eclfc~~~~~~~~~e~~~~~~~--~~~~~~VliN~~Pi~~  158 (358)
                      |+||||++|++++|                ||||+| +++|++||+..++++..+..++..+  .++...|+||+|||++
T Consensus       103 FvaQLN~~R~~krR~~~f~i~~v~qpFd~~kFNF~KV~~~EvLf~~~~~~~~~~~~~~~~~~~~~~s~~~VlINvsPI~~  182 (403)
T PLN03103        103 FIAQLNEGRHLKKRPTEFRVDKVLQPFDGKKFNFTKVGQEEVLFQFEQGEDDIPEFFPSAPIDASNSPNVVAINVSPIEY  182 (403)
T ss_pred             eEEEecccchhccCCCccchhhccCCCCCCcccCCCCCCceeEEEEecCCCcccccccCCccccCCCccEEEEeCCCCcc
Confidence            99999999999976                899999 9999999999887766666665544  2677899999999999


Q ss_pred             CeEEEeecCCCCC--CCCHHHHHHHHHHHHHcCCCceeEeeccCCCCc--CceeeeeeecCceecccccCCccccc-CCC
Q 018264          159 GHVFVVPCGSNRL--YPDARSFEMIVRIAFEINNYSFRLFYDCSSPGA--SHVYFQACYFPDHLPVELMPIDTFFS-DGQ  233 (358)
Q Consensus       159 gH~LlVP~~~~~~--~lt~~~l~la~~~~~~~~~~gf~vGyNsgga~a--nHLHfh~~yl~~~lPiE~~~~~~l~~-~~~  233 (358)
                      ||+|+||++..++  +|+.+++++|+++++++++|+|||||||.||.|  ||||||+||++++||||++|++++.. ...
T Consensus       183 gH~LlvP~~~~~lPQ~i~~~~l~la~~~a~~~~~p~frvgYNSlGA~ASvNHLHFQa~yl~~~lPvE~ap~~~l~~~~~~  262 (403)
T PLN03103        183 GHVLLVPRVLDCLPQRIDPDSFLLALYMAAEANNPYFRVGYNSLGAFATINHLHFQAYYLANPFPVEKAPTVRIPHGTAK  262 (403)
T ss_pred             CeEEEcCCcccCCCeEecHHHHHHHHHHHHhcCCCcEEEEecCCccccCcceeeeeecccCCCCccccCccccccccccC
Confidence            9999999998876  999999999999999999999999999877764  99999999999999999999998852 224


Q ss_pred             CceEEEEccCCceeEEEEEEecCCHHHHHHHHHHHHHHhhhcCCCceEEEEeCCeEEEEEeccC--------------CC
Q 018264          234 RGIYISTLIDYPIKTILFEYTYNNRIIMMEAISEICSSLREKNISYNLLISDCGKRIFLFLQKS--------------AI  299 (358)
Q Consensus       234 ~g~~v~~l~dyP~~~~vf~~~~~~~e~~~~~~~~~~~~L~~~ni~~Nll~~~~g~rv~ifPR~~--------------~~  299 (358)
                      +|+++|++.|||+++|||++ +++.+++++.+++++++|+++|+|||||+|++|+||||||+|+              .+
T Consensus       263 ~g~~vy~L~~yP~~~lvf~~-~~~~~~l~~~v~~~~~~L~~~niP~NL~i~~~g~rvflfP~Cy~~k~~~g~v~~~lL~s  341 (403)
T PLN03103        263 SGVKVSELVDYPVRGLVFEG-GSDLEDLANSVADACICLQDNNIPYNLLISDCGKRVFLFPQCYAEKQALGEVSQELLDT  341 (403)
T ss_pred             CCceEEEecCCCceEEEEEe-CccHHHHHHHHHHHHHhhccCCcceEEEEEcCCeEEEEeCchhhhhhhccccchhHhhc
Confidence            57899999999999999996 6889999999999999999999999999999999999999664              27


Q ss_pred             CcCchhccccceeeecChHHHhhcCHHHHHHHHHhccCCHHHHHHHHHHHHhh--hhhhc
Q 018264          300 SGNLLAWECGGYFLFGSKYEFDQVTEEAIHKRLSAVSLNDEGFQVVKQLCCSI--ASKLA  357 (358)
Q Consensus       300 ~~npa~~ElaG~lv~~r~eDFe~lTee~~~~il~evslsee~f~~l~~~~~~~--~~~l~  357 (358)
                      +||||+||||||||+||++|||++||+.|+++|+|||||+++|++|+++|++.  +|.|+
T Consensus       342 ~~NPA~~EmsG~l~~~~~eDfe~lTE~~~~~il~EvsLse~~f~ev~~~i~~~~~~~~~~  401 (403)
T PLN03103        342 QVNPAVWEISGHIVLKRKEDYERATEEYAWRLLAEVSLSEERFQEVKALCFAASAADCLV  401 (403)
T ss_pred             cCChhhHhhcceeeecchHhhhhcCHHHHHHHHHHccCCHHHHHHHHHHHHhcccccccc
Confidence            79999999999999999999999999999999999999999999999999998  55553

>KOG2720 consensus Predicted hydrolase (HIT family) [General function prediction only] Back     alignment and domain information
>COG0537 Hit Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases [Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only] Back     alignment and domain information
>PRK10687 purine nucleoside phosphoramidase; Provisional Back     alignment and domain information
>cd01276 PKCI_related Protein Kinase C Interacting protein related (PKCI): PKCI and related proteins belong to the ubiquitous HIT family of hydrolases that act on alpha-phosphates of ribonucleotides Back     alignment and domain information
>cd01278 aprataxin_related aprataxin related: Aprataxin, a HINT family hydrolase is mutated in ataxia oculomotor apraxia syndrome Back     alignment and domain information
>COG4360 APA2 ATP adenylyltransferase (5',5'''-P-1,P-4-tetraphosphate phosphorylase II) [Nucleotide transport and metabolism] Back     alignment and domain information
>cd01275 FHIT FHIT (fragile histidine family): FHIT proteins, related to the HIT family carry a motif HxHxH/Qxx (x, is a hydrophobic amino acid), On the basis of sequence, substrate specificity, structure, evolution and mechanism, HIT proteins are classified into three branches: the Hint branch, which consists of adenosine 5' -monophosphoramide hydrolases, the Fhit branch, that consists of diadenosine polyphosphate hydrolases, and the GalT branch consisting of specific nucloside monophosphate transferases Back     alignment and domain information
>cd01277 HINT_subgroup HINT (histidine triad nucleotide-binding protein) subgroup: Members of this CD belong to the superfamily of histidine triad hydrolases that act on alpha-phosphate of ribonucleotides Back     alignment and domain information
>PF01230 HIT: HIT domain; InterPro: IPR001310 The Histidine Triad (HIT) motif, His-x-His-x-His-x-x (x, a hydrophobic amino acid) was identified as being highly conserved in a variety of organisms [] Back     alignment and domain information
>cd00468 HIT_like HIT family: HIT (Histidine triad) proteins, named for a motif related to the sequence HxHxH/Qxx (x, a hydrophobic amino acid), are a superfamily of nucleotide hydrolases and transferases, which act on the alpha-phosphate of ribonucleotides Back     alignment and domain information
>PRK05270 galactose-1-phosphate uridylyltransferase; Provisional Back     alignment and domain information
>KOG3275 consensus Zinc-binding protein of the histidine triad (HIT) family [Signal transduction mechanisms] Back     alignment and domain information
>TIGR01239 galT_2 galactose-1-phosphate uridylyltransferase, family 2 Back     alignment and domain information
>PF11969 DcpS_C: Scavenger mRNA decapping enzyme C-term binding; PDB: 1VLR_B 1XMM_D 1XML_B 1ST0_A 3BLA_B 3BL9_B 3BL7_B 1ST4_B 1XQU_B Back     alignment and domain information
>PRK11720 galactose-1-phosphate uridylyltransferase; Provisional Back     alignment and domain information
>TIGR00209 galT_1 galactose-1-phosphate uridylyltransferase, family 1 Back     alignment and domain information
>KOG3379 consensus Diadenosine polyphosphate hydrolase and related proteins of the histidine triad (HIT) family [Nucleotide transport and metabolism; General function prediction only] Back     alignment and domain information
>COG4468 GalT Galactose-1-phosphate uridyltransferase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN02643 ADP-glucose phosphorylase Back     alignment and domain information
>PF04677 CwfJ_C_1: Protein similar to CwfJ C-terminus 1; InterPro: IPR006768 This group of sequences contain a conserved C-terminal domain which is found in the Schizosaccharomyces pombe (Fission yeast) protein Cwf19 (Q09909 from SWISSPROT) and its homologues Back     alignment and domain information
>cd00608 GalT Galactose-1-phosphate uridyl transferase (GalT): This enzyme plays a key role in galactose metabolism by catalysing the transfer of a uridine 5'-phosphoryl group from UDP-galactose 1-phosphate Back     alignment and domain information
>PF09830 ATP_transf: ATP adenylyltransferase; InterPro: IPR019200 Diadenosine 5',5'''-P-1,P-4-tetraphosphate (Ap4A) and related diadenosine oligoposphates such as Ap3A are important intracellular and extracellular signalling molecules in prokaryotes and eukaryotes [] Back     alignment and domain information
>KOG4359 consensus Protein kinase C inhibitor-like protein [General function prediction only] Back     alignment and domain information
>KOG2476 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>cd00608 GalT Galactose-1-phosphate uridyl transferase (GalT): This enzyme plays a key role in galactose metabolism by catalysing the transfer of a uridine 5'-phosphoryl group from UDP-galactose 1-phosphate Back     alignment and domain information
>COG1085 GalT Galactose-1-phosphate uridylyltransferase [Energy production and conversion] Back     alignment and domain information
>PLN02643 ADP-glucose phosphorylase Back     alignment and domain information
>PRK11720 galactose-1-phosphate uridylyltransferase; Provisional Back     alignment and domain information
>TIGR00209 galT_1 galactose-1-phosphate uridylyltransferase, family 1 Back     alignment and domain information
>KOG0562 consensus Predicted hydrolase (HIT family) [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query358
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 42.5 bits (99), Expect = 2e-04
 Identities = 58/350 (16%), Positives = 106/350 (30%), Gaps = 113/350 (32%)

Query: 4   IKQLEHTKSLTKSATPEQLKCSFLCFQGVKTLNYCLGNQSFFDNTSFVEP----SGVPED 59
           I    H+ +LT     + L   +L             +    D      P    +  P  
Sbjct: 289 ISLDHHSMTLTPDEV-KSLLLKYL-------------DCRPQD-----LPREVLTTNPRR 329

Query: 60  LSLLDALL---LAQWEERMWRGCFRYDVTASEIKVISGGKKFLAQLNEKWIMDPFILNSI 116
           LS++   +   LA W+   W+      V   ++  I   +  L  L        F     
Sbjct: 330 LSIIAESIRDGLATWDN--WK-----HVNCDKLTTII--ESSLNVLEPAEYRKMF----- 375

Query: 117 DQNEEL-LFCVTRSEKANSELIPSAAVPNDSILVIINANPIEYG-HVFVVPCGSNRLYPD 174
              + L +F       A+   IP+       +L +I  + I+    V V       L  +
Sbjct: 376 ---DRLSVF----PPSAH---IPTI------LLSLIWFDVIKSDVMVVVNKLHKYSLV-E 418

Query: 175 ARSFEMIVRI---AFE---------------INNYSFRLFYDCSSPGASHV--YFQACYF 214
            +  E  + I     E               +++Y+    +D       ++  YF   + 
Sbjct: 419 KQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYF-YSHI 477

Query: 215 PDHLP-------VELMP---IDTFF----------SDGQRGIYISTLIDYPIKTILFEYT 254
             HL        + L     +D  F          +    G  ++TL          ++ 
Sbjct: 478 GHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQ-------LKF- 529

Query: 255 YNNRIIMMEAISE-ICSSLRE--KNISYNLLISDCGK--RIFLFLQKSAI 299
           Y   I   +   E + +++ +    I  NL+ S      RI L  +  AI
Sbjct: 530 YKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAI 579

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query358
3n1s_A119 HIT-like protein HINT; histidine triad nucleotide 99.21
3ano_A218 AP-4-A phosphorylase; diadenosine polyphosphate, H 99.2
4egu_A119 Histidine triad (HIT) protein; structural genomics 99.19
3oj7_A117 Putative histidine triad family protein; hydrolase 99.17
3r6f_A135 HIT family protein; structural genomics, seattle s 99.16
3o1c_A126 Histidine triad nucleotide-binding protein 1; hydr 99.16
1xqu_A147 HIT family hydrolase; protein STRU initiative, PSI 99.09
3o0m_A149 HIT family protein; ssgcid, NIH, niaid, SBRI, UW, 99.04
3l7x_A173 SMU.412C, putative HIT-like protein involved in ce 99.02
3lb5_A161 HIT-like protein involved in cell-cycle regulatio; 99.01
2eo4_A149 150AA long hypothetical histidine triad nucleotid 99.01
1y23_A145 HIT, histidine triad protein; HIT protein, PKCI-1, 98.99
3imi_A147 HIT family protein; structural genomics, infectiou 98.99
3ksv_A149 Uncharacterized protein; HIT family, structural ge 98.94
1fit_A147 FragIle histidine protein; FHIT, fragIle histidine 98.79
3p0t_A138 Uncharacterized protein; ssgcid, HIT-like protein, 98.76
2oik_A154 Histidine triad (HIT) protein; HIT-like fold, stru 98.75
1ems_A440 Nitfhit, NIT-fragIle histidine triad fusion protei 98.63
3ohe_A137 Histidine triad (HIT) protein; structural genomics 98.38
1gup_A348 Galactose-1-phosphate uridylyltransferase; nucleot 98.33
3i24_A149 HIT family hydrolase; structural genomics, PSI-2, 98.32
1z84_A351 Galactose-1-phosphate uridyl transferase-like prot 98.31
1z84_A351 Galactose-1-phosphate uridyl transferase-like prot 98.13
3nrd_A135 Histidine triad (HIT) protein; structural genomics 98.06
3sp4_A204 Aprataxin-like protein; HIT domain, zinc finger, D 97.7
3i4s_A149 Histidine triad protein; hydrolase, phosphatase, H 97.51
1gup_A348 Galactose-1-phosphate uridylyltransferase; nucleot 96.14
3bl9_A301 Scavenger mRNA-decapping enzyme DCPS; ligand compl 92.76
1vlr_A350 MRNA decapping enzyme; 16740816, structural genomi 92.02
>3n1s_A HIT-like protein HINT; histidine triad nucleotide binding protein, GMP, hydro; HET: 5GP; 1.45A {Escherichia coli} SCOP: d.13.1.0 PDB: 3n1t_A* Back     alignment and structure
Probab=99.21  E-value=1.6e-11  Score=102.73  Aligned_cols=94  Identities=17%  Similarity=0.213  Sum_probs=67.0

Q ss_pred             CceeeeecCCCcccccccCCcccCCCceEEEEeCcCCCCCeEEEeecCCCCC--CCCHH-------HHHHHHHHHHH--c
Q 018264          120 EELLFCVTRSEKANSELIPSAAVPNDSILVIINANPIEYGHVFVVPCGSNRL--YPDAR-------SFEMIVRIAFE--I  188 (358)
Q Consensus       120 ~eclfc~~~~~~~~~e~~~~~~~~~~~~~VliN~~Pi~~gH~LlVP~~~~~~--~lt~~-------~l~la~~~~~~--~  188 (358)
                      +.|+||...+.+....    .+..++.+++++|.+|+.+||+|+||.+|...  .|+++       ++..+.++++.  .
T Consensus         3 ~~CiFC~I~~ge~~~~----iv~ede~~~af~d~~P~~pgH~LViPk~Hv~~l~dL~~~e~~~l~~l~~~~~~v~~~~~~   78 (119)
T 3n1s_A            3 EETIFSKIIRREIPSD----IVYQDDLVTAFRDISPQAPTHILIIPNILIPTVNDVSAEHEQALGRMITVAAKIAEQEGI   78 (119)
T ss_dssp             CCCHHHHHHTTSSCCC----EEEECSSEEEEECSSCSSSEEEEEEESSCCCSGGGCCGGGHHHHHHHHHHHHHHHHHTTC
T ss_pred             CCChhhhhhcCCCcCC----EEEECCCEEEEECCCCCCCCeEEEEehhHhCCHhHcCHHHHHHHHHHHHHHHHHHHHhCC
Confidence            5799996543221111    23348889999999999999999999999854  88875       33445556654  3


Q ss_pred             CCCceeEeeccC--CCC-cCceeeeeeecCcee
Q 018264          189 NNYSFRLFYDCS--SPG-ASHVYFQACYFPDHL  218 (358)
Q Consensus       189 ~~~gf~vGyNsg--ga~-anHLHfh~~yl~~~l  218 (358)
                      +++|||+|+|+|  |+. -.|+|+|++. ...+
T Consensus        79 ~~~g~ni~~n~g~~agq~V~HlH~Hiip-r~~~  110 (119)
T 3n1s_A           79 AEDGYRLIMNTNRHGGQEVYHIHMHLLG-GRPL  110 (119)
T ss_dssp             TTTCEEEEEEEHHHHTCCSSSCCEEEEE-SSCC
T ss_pred             CCCCeEEEEeCCCCcCCCcCEEEEEEeC-Cccc
Confidence            678999999964  222 3799999997 4443
>3ano_A AP-4-A phosphorylase; diadenosine polyphosphate, HIT transferase; HET: PG4; 1.89A {Mycobacterium tuberculosis} Back     alignment and structure
>4egu_A Histidine triad (HIT) protein; structural genomics, center for structural genomics of infec diseases, csgid, HIT domain, unknown function; HET: 5GP; 0.95A {Clostridium difficile} Back     alignment and structure
>3oj7_A Putative histidine triad family protein; hydrolase, structural genomics, seattle structural genomics for infectious disease, ssgcid; 1.40A {Entamoeba histolytica} SCOP: d.13.1.0 PDB: 3omf_A* 3oxk_A* Back     alignment and structure
>3r6f_A HIT family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, protozoan parasite; 1.85A {Encephalitozoon cuniculi} Back     alignment and structure
>3o1c_A Histidine triad nucleotide-binding protein 1; hydrolase, HINT protein, HIT protein, adenosine 5'- monophosphoramidase; HET: ADN; 1.08A {Oryctolagus cuniculus} SCOP: d.13.1.1 PDB: 3llj_A* 1rzy_A* 3qgz_A* 3o1z_A 3o1x_A* 4eqe_A* 4eqg_A* 4eqh_A* 3tw2_A* 1kpb_A 1kpf_A* 1kpa_A 1kpc_A 1av5_A* 1kpe_A* 4rhn_A* 3rhn_A* 5rhn_A* 6rhn_A Back     alignment and structure
>1xqu_A HIT family hydrolase; protein STRU initiative, PSI, southeast collaboratory for structural GEN secsg; 2.30A {Clostridium thermocellum} SCOP: d.13.1.1 Back     alignment and structure
>3o0m_A HIT family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, hydrola structural genomics; HET: AMP; 1.90A {Mycobacterium smegmatis str} Back     alignment and structure
>3l7x_A SMU.412C, putative HIT-like protein involved in cell-cycle regulation; 1.70A {Streptococcus mutans} Back     alignment and structure
>3lb5_A HIT-like protein involved in cell-cycle regulatio; niaid, seattle structural genomics center for infectious DIS ssgcid, histidine triad; 1.90A {Bartonella henselae} Back     alignment and structure
>2eo4_A 150AA long hypothetical histidine triad nucleotid protein; HIT family, structural genomics, NPPSFA; 1.80A {Sulfolobus tokodaii} Back     alignment and structure
>1y23_A HIT, histidine triad protein; HIT protein, PKCI-1, cell-cycle regulation, NYSGXRC, structural genomics, protein structure initiative; 2.30A {Bacillus subtilis} SCOP: d.13.1.1 Back     alignment and structure
>3imi_A HIT family protein; structural genomics, infectious diseases for structural genomics of infectious diseases, unknown FUN csgid; 2.01A {Bacillus anthracis str} SCOP: d.13.1.1 Back     alignment and structure
>3ksv_A Uncharacterized protein; HIT family, structural genomics, structural genomics of PATH protozoa consortium, SGPP, unknown function; 1.90A {Leishmania major} SCOP: d.13.1.0 Back     alignment and structure
>1fit_A FragIle histidine protein; FHIT, fragIle histidine triad protein, putative human tumor suppressor, advanced photon source, APS; HET: FRU; 1.85A {Homo sapiens} SCOP: d.13.1.1 PDB: 1fhi_A* 2fit_A* 3fit_A* 4fit_A 5fit_A* 6fit_A* 2fhi_A* Back     alignment and structure
>3p0t_A Uncharacterized protein; ssgcid, HIT-like protein, mycobacerium paratuberculosis, STR genomics; 1.90A {Mycobacterium avium subsp} Back     alignment and structure
>2oik_A Histidine triad (HIT) protein; HIT-like fold, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.65A {Methylobacillus flagellatus} SCOP: d.13.1.1 Back     alignment and structure
>1ems_A Nitfhit, NIT-fragIle histidine triad fusion protein; WORM, nitrilase, nucleotide-binding protein, cancer; 2.80A {Caenorhabditis elegans} SCOP: d.13.1.1 d.160.1.1 Back     alignment and structure
>3ohe_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.20A {Marinobacter aquaeolei} Back     alignment and structure
>1gup_A Galactose-1-phosphate uridylyltransferase; nucleotidyltransferase, galactose metabolism; HET: GDU; 1.80A {Escherichia coli} SCOP: d.13.1.2 d.13.1.2 PDB: 1guq_A* 1hxq_A* 1hxp_A* Back     alignment and structure
>3i24_A HIT family hydrolase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.50A {Vibrio fischeri ES114} Back     alignment and structure
>1z84_A Galactose-1-phosphate uridyl transferase-like protein; GALT, zinc, AMP, structural genomics, protein structure initiative, CESG; HET: AMP; 1.83A {Arabidopsis thaliana} SCOP: d.13.1.2 d.13.1.2 PDB: 1zwj_A 2q4h_A* 2q4l_A 2h39_A* Back     alignment and structure
>1z84_A Galactose-1-phosphate uridyl transferase-like protein; GALT, zinc, AMP, structural genomics, protein structure initiative, CESG; HET: AMP; 1.83A {Arabidopsis thaliana} SCOP: d.13.1.2 d.13.1.2 PDB: 1zwj_A 2q4h_A* 2q4l_A 2h39_A* Back     alignment and structure
>3nrd_A Histidine triad (HIT) protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.06A {Sinorhizobium meliloti} Back     alignment and structure
>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A* Back     alignment and structure
>3i4s_A Histidine triad protein; hydrolase, phosphatase, HIT superfamily, PSI-2, NYSGXRC, STR genomics, protein structure initiative; 1.75A {Bradyrhizobium japonicum} Back     alignment and structure
>1gup_A Galactose-1-phosphate uridylyltransferase; nucleotidyltransferase, galactose metabolism; HET: GDU; 1.80A {Escherichia coli} SCOP: d.13.1.2 d.13.1.2 PDB: 1guq_A* 1hxq_A* 1hxp_A* Back     alignment and structure
>3bl9_A Scavenger mRNA-decapping enzyme DCPS; ligand complex, cytoplasm, hydrolase, nonsense-mediated mRNA decay, nucleus, polymorphism, structural genomics; HET: DD2; 1.80A {Homo sapiens} SCOP: d.13.1.3 d.246.1.1 PDB: 3bl7_A* 3bla_A* Back     alignment and structure
>1vlr_A MRNA decapping enzyme; 16740816, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; 1.83A {Mus musculus} SCOP: d.13.1.3 d.246.1.1 PDB: 1xmm_B* 1xml_B 1st0_B* 1st4_B* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query358
d1y23a_139 Hit {Bacillus subtilis [TaxId: 1423]} 99.23
d1xqua_113 Putative hydrolase {Clostridium thermocellum [TaxI 99.19
d1kpfa_111 Protein kinase C inhibitor-1, PKCI-1 {Human (Homo 99.18
d1emsa1160 NIT-FHIT fusion protein, C-terminal domain {Nemato 98.97
d2oika1139 Histidine triad protein Mfla2506 {Methylobacillus 98.88
d1fita_146 FHIT (fragile histidine triad protein) {Human (Hom 98.82
d1z84a2156 Galactose-1-phosphate uridylyltransferase {Thale c 98.6
d1guqa2171 Galactose-1-phosphate uridylyltransferase {Escheri 98.52
d1vlra1192 mRNA decapping enzyme DcpS C-terminal domain {Mous 97.38
d1z84a1173 Galactose-1-phosphate uridylyltransferase {Thale c 95.66
d1guqa1176 Galactose-1-phosphate uridylyltransferase {Escheri 88.98
>d1y23a_ d.13.1.1 (A:) Hit {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: HIT-like
superfamily: HIT-like
family: HIT (HINT, histidine triad) family of protein kinase-interacting proteins
domain: Hit
species: Bacillus subtilis [TaxId: 1423]

Probab=99.23  E-value=3.5e-12  Score=106.82  Aligned_cols=90  Identities=13%  Similarity=0.192  Sum_probs=64.0

Q ss_pred             CceeeeecCCCcccccccCCcccCCCceEEEEeCcCCCCCeEEEeecCCCCC--CCCHH-------HHHHHHHHHHHc-C
Q 018264          120 EELLFCVTRSEKANSELIPSAAVPNDSILVIINANPIEYGHVFVVPCGSNRL--YPDAR-------SFEMIVRIAFEI-N  189 (358)
Q Consensus       120 ~eclfc~~~~~~~~~e~~~~~~~~~~~~~VliN~~Pi~~gH~LlVP~~~~~~--~lt~~-------~l~la~~~~~~~-~  189 (358)
                      +.|+||...+.+....    .+..++.++++++.+|+.+||+|+||.+|...  .|+.+       ++..+.+.+++. .
T Consensus         1 e~CiFC~I~~~e~p~~----~i~ede~~~af~d~~P~~~GH~LViPk~H~~~~~dL~~~~~~~l~~~~~~~~~~l~~~~~   76 (139)
T d1y23a_           1 ENCIFCKIIAGDIPSA----KVYEDEHVLAFLDISQVTKGHTLVIPKTHIENVYEFTDELAKQYFHAVPKIARAIRDEFE   76 (139)
T ss_dssp             CCCHHHHHHHTSSCCC----EEEECSSEEEEECTTCSSTTCEEEEESSCCSSGGGCCHHHHHTTTTHHHHHHHHHHHHHC
T ss_pred             CcCccCccccCCCCcc----EEEECCCEEEEecCCCCCCcEEEEEEecccccccccchHHHHHHHHHHHHHHHHHhhhcc
Confidence            4699995433221111    23347889999999999999999999999854  88876       222334444444 8


Q ss_pred             CCceeEeeccCC--CC-cCceeeeeee
Q 018264          190 NYSFRLFYDCSS--PG-ASHVYFQACY  213 (358)
Q Consensus       190 ~~gf~vGyNsgg--a~-anHLHfh~~y  213 (358)
                      +.|||+++|+|.  +. -.|+|+|++.
T Consensus        77 ~~g~~i~~n~g~~agq~v~H~H~HviP  103 (139)
T d1y23a_          77 PIGLNTLNNNGEKAGQSVFHYHMHIIP  103 (139)
T ss_dssp             CSEEEEEEEESGGGTCCSSSCCEEEEE
T ss_pred             cCCcEEEeCCCccccEecCEEEEEEEc
Confidence            889999999763  22 2899999976
>d1xqua_ d.13.1.1 (A:) Putative hydrolase {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1kpfa_ d.13.1.1 (A:) Protein kinase C inhibitor-1, PKCI-1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1emsa1 d.13.1.1 (A:281-440) NIT-FHIT fusion protein, C-terminal domain {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Back     information, alignment and structure
>d2oika1 d.13.1.1 (A:6-144) Histidine triad protein Mfla2506 {Methylobacillus flagellatus [TaxId: 405]} Back     information, alignment and structure
>d1fita_ d.13.1.1 (A:) FHIT (fragile histidine triad protein) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1z84a2 d.13.1.2 (A:196-351) Galactose-1-phosphate uridylyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1guqa2 d.13.1.2 (A:178-348) Galactose-1-phosphate uridylyltransferase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1vlra1 d.13.1.3 (A:146-337) mRNA decapping enzyme DcpS C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1z84a1 d.13.1.2 (A:23-195) Galactose-1-phosphate uridylyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1guqa1 d.13.1.2 (A:2-177) Galactose-1-phosphate uridylyltransferase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure