Citrus Sinensis ID: 018307

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------36
Protein Sequence
MVEAQTWTTRRMSNPRLSETSADHQVLDIPATPPGDVRNNNSYTVGFGSFVSPHIFTALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALSAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKRSKVTTH
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHEHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHcHHHHHHccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHEEEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
mveaqtwttrrmsnprlsetsadhqvldipatppgdvrnnnsytvgfgsfvspHIFTALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALSAIFSFSVVCgntslrylpvsfnqaigattPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLasnseplfHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAkkrskvtth
Flexible Loop (DISEMBL)
mveaqtwttrrmsnprlsetsadhqvldiPATPPGDVRNNNSYTVGFGSFVSPHIFTALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALSAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYseakkrskvtth
Low Complexity Region (SEG)
MVEAQTWTTRRMSNPRLSETSADHQVLDIPATPPGDVRNNNSYTVGFGSFVSPHIFTALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALSAIFSFSVVCGNTSLRYLPVSFNQaigattpfftaifaflitCKKESAEVYCALMPVVFGIVLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNLTNFLVTKHTSALTLQVLGNakaavaavvsvLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKRSKVTTH
Disordered region (IsUnstruct)
****************************************NSYTVGFGSFVSPHIFTALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALSAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYS***********
Disordered Region (DISOPRED)
*****************************************************HIFTALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALSAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEA**R******
Disordered Region (DISEMBL)
*********************ADHQVLDIPATPPGDVRNNNSYTVGFGSFVSPHIFTALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALSAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEA*********
Disordered Region (DISPRO)
***********************************************GSFVSPHIFTALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALSAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKRSK****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVEAQTWTTRRMSNPRLSETSADHQVLDIPATPPGDVRNNNSYTVGFGSFVSPHIFTALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALSAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKRSKVTTH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	358	2.2.26 [Sep-21-2011]
Q9LDH3	361	Probable sugar phosphate/	yes	no	0.991	0.983	0.753	1e-150
Q5XF09	308	Probable sugar phosphate/	no	no	0.840	0.977	0.674	1e-112
Q6DBP3	309	Probable sugar phosphate/	no	no	0.840	0.974	0.667	1e-110
Q9FYE5	309	Probable sugar phosphate/	no	no	0.832	0.964	0.620	1e-106
Q9SS40	355	Probable sugar phosphate/	no	no	0.944	0.952	0.558	1e-103
Q9C521	336	UDP-galactose transporter	no	no	0.810	0.863	0.321	9e-41
Q9SFE9	341	GDP-mannose transporter G	no	no	0.810	0.850	0.315	2e-39
Q3E6T0	349	Probable sugar phosphate/	no	no	0.784	0.805	0.292	3e-25
Q9SUV2	350	Probable sugar phosphate/	no	no	0.787	0.805	0.287	9e-25
Q9LFN3	351	Probable sugar phosphate/	no	no	0.793	0.809	0.283	6e-24

>sp|Q9LDH3|PT112_ARATH Probable sugar phosphate/phosphate translocator At1g12500 OS=Arabidopsis thaliana GN=At1g12500 PE=2 SV=1

 Score =  530 bits (1365), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 269/357 (75%), Positives = 298/357 (83%), Gaps = 2/357 (0%)

Query: 1   MVEAQTWTTRRMSNPRL-SETSADHQVLDIPATPPGDVRNNNSYTVGFGS-FVSPHIFTA 58
           MVEAQ+WTTRRMSNPR  +  +A   ++DIP TPP    ++        S  VSP I TA
Sbjct: 1   MVEAQSWTTRRMSNPRFDAAATAAPTIVDIPGTPPHSSASSPLKPFFLSSPTVSPTILTA 60

Query: 59  LIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHIL 118
            IIA+W+ SNIGVLLLNKYLL +YG+RYPIFLTM HM+SCA YS   I+   +VP QHIL
Sbjct: 61  AIIAAWFGSNIGVLLLNKYLLFYYGFRYPIFLTMTHMLSCAAYSSAVINIAGIVPRQHIL 120

Query: 119 SRKQFLKIFALSAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAE 178
           SR+QFLKI +LSAIF  SVVCGNTSLRY+PVSFNQAIGATTPFFTA+F+FLITCK ES E
Sbjct: 121 SRRQFLKILSLSAIFCLSVVCGNTSLRYIPVSFNQAIGATTPFFTAVFSFLITCKTESTE 180

Query: 179 VYCALMPVVFGIVLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNL 238
           VY AL+PVV GIVLASNSEP FHLFGFL+CV STAGRALKSVVQGI+LTSE+EKLHSMNL
Sbjct: 181 VYLALLPVVSGIVLASNSEPSFHLFGFLICVASTAGRALKSVVQGIILTSESEKLHSMNL 240

Query: 239 LLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNLTNFLVTK 298
           LLYMAPM+A ILLPFTLYIEGNV    IEKA  D  ++FLL GNATVAYLVNLTNFLVTK
Sbjct: 241 LLYMAPMAACILLPFTLYIEGNVLRVLIEKARTDPLIIFLLAGNATVAYLVNLTNFLVTK 300

Query: 299 HTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKRSKV 355
           HTSALTLQVLGN KAAVAA VSVLIFRNPVTVMG+ GF VTIMGVVLYSEA+KRSK+
Sbjct: 301 HTSALTLQVLGNGKAAVAAGVSVLIFRNPVTVMGIAGFGVTIMGVVLYSEARKRSKL 357

Arabidopsis thaliana (taxid: 3702)

>sp|Q5XF09|PT311_ARATH Probable sugar phosphate/phosphate translocator At3g11320 OS=Arabidopsis thaliana GN=At3g11320 PE=2 SV=1

 Score =  404 bits (1039), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 203/301 (67%), Positives = 248/301 (82%)

Query: 54  HIFTALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVP 113
             FT  ++ASWY SNIGVLLLNKYLLS YG++YPIFLTM HM +C++ SYVAI ++++VP
Sbjct: 8   RFFTIGLVASWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLLSYVAIAWMKMVP 67

Query: 114 IQHILSRKQFLKIFALSAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCK 173
           +Q I SR QFLKI ALS +F  SVV GN SLR+LPVSFNQAIGATTPFFTA+FA+LIT K
Sbjct: 68  MQTIRSRVQFLKIAALSLVFCVSVVFGNISLRFLPVSFNQAIGATTPFFTAVFAYLITFK 127

Query: 174 KESAEVYCALMPVVFGIVLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKL 233
           +E+   Y  L+PVV G+V+AS SEP FHLFGF++C+ +TA RALKSV+QGILL+SE EKL
Sbjct: 128 REAWLTYFTLVPVVTGVVIASGSEPSFHLFGFIMCIAATAARALKSVLQGILLSSEGEKL 187

Query: 234 HSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNLTN 293
           +SMNLLLYMAP++ + LLP TL +E NV   TI  A +D  +++ LL N+ +AY VNLTN
Sbjct: 188 NSMNLLLYMAPIAVVFLLPATLIMEKNVVGITIALARDDFRIVWYLLFNSALAYFVNLTN 247

Query: 294 FLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKRS 353
           FLVTKHTSALTLQVLGNAK AVA VVS+LIFRNPV+V GM G+++T+ GV+LYSEAKKRS
Sbjct: 248 FLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVCGVILYSEAKKRS 307

Query: 354 K 354
           K
Sbjct: 308 K 308

Arabidopsis thaliana (taxid: 3702)

>sp|Q6DBP3|PT505_ARATH Probable sugar phosphate/phosphate translocator At5g05820 OS=Arabidopsis thaliana GN=At5g05820 PE=2 SV=1

 Score =  400 bits (1027), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 201/301 (66%), Positives = 247/301 (82%)

Query: 54  HIFTALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVP 113
             FT  ++ASWY SNIGVLLLNKYLLS YG++YPIFLTM HM +C++ SYVAI +L++VP
Sbjct: 8   RFFTIGLVASWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLLSYVAIAWLKMVP 67

Query: 114 IQHILSRKQFLKIFALSAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCK 173
           +Q I SR QF KI ALS +F  SVV GN SLR+LPVSFNQAIGATTPFFTA+FA+L+T K
Sbjct: 68  MQTIRSRVQFFKIAALSLVFCVSVVFGNISLRFLPVSFNQAIGATTPFFTAVFAYLMTRK 127

Query: 174 KESAEVYCALMPVVFGIVLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKL 233
           KE+   Y  L+PVV G+V+AS  EP FHLFGFL+C+ +TA RALKSV+QGILL+SE EKL
Sbjct: 128 KEAWLTYFTLVPVVTGVVIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSSEGEKL 187

Query: 234 HSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNLTN 293
           +SMNLLLYMAP++ ++LLP TL +E NV   TI  A +D  +++ LL N+ +AYLVNLTN
Sbjct: 188 NSMNLLLYMAPIAVVLLLPATLIMEKNVVGITIALARDDFRIVWYLLFNSALAYLVNLTN 247

Query: 294 FLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKRS 353
           FLVT HTSALTLQVLGNAK AVA VVS+LIF+NPV+V GM G+++T+ GV+LYSEAKKR+
Sbjct: 248 FLVTNHTSALTLQVLGNAKGAVAVVVSILIFKNPVSVTGMLGYSLTVCGVILYSEAKKRN 307

Query: 354 K 354
           K
Sbjct: 308 K 308

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FYE5|PT504_ARATH Probable sugar phosphate/phosphate translocator At5g04160 OS=Arabidopsis thaliana GN=At5g04160 PE=2 SV=1

 Score =  384 bits (985), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 185/298 (62%), Positives = 243/298 (81%)

Query: 55  IFTALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPI 114
           +F + +I SWY SNIGVLLLNK+LLS YG+++PIFLTM HM +CA+ SY++I FL+LVP+
Sbjct: 10  LFISTLIISWYSSNIGVLLLNKFLLSNYGFKFPIFLTMCHMSACAILSYISIVFLKLVPL 69

Query: 115 QHILSRKQFLKIFALSAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKK 174
           QH+ SR QFLK+  LS +F  SVV GN SLRYLPVSFNQA+GATTPFFTA+FA+L+T K+
Sbjct: 70  QHLKSRSQFLKVATLSIVFCASVVGGNISLRYLPVSFNQAVGATTPFFTALFAYLMTFKR 129

Query: 175 ESAEVYCALMPVVFGIVLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLH 234
           E+   Y AL+PVV G+V+AS  EP FH FGF++C+ +TA RA KSV+QGILL+SE EKL+
Sbjct: 130 EAWVTYGALVPVVAGVVIASGGEPGFHWFGFIMCISATAARAFKSVLQGILLSSEGEKLN 189

Query: 235 SMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNLTNF 294
           SMNL+LYM+P++ + LLP TL++E +V + T+  A + +++  LLL N+ +AY  NL NF
Sbjct: 190 SMNLMLYMSPIAVIALLPVTLFMEPDVISVTLTLAKQHQYMWILLLVNSVMAYSANLLNF 249

Query: 295 LVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKR 352
           LVTKHTSALTLQVLGNAK AVA V+S+LIF+NPVTVMG+ G+++T++GVV Y E K+R
Sbjct: 250 LVTKHTSALTLQVLGNAKGAVAVVISILIFQNPVTVMGIGGYSITVLGVVAYGETKRR 307

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SS40|PT310_ARATH Probable sugar phosphate/phosphate translocator At3g10290 OS=Arabidopsis thaliana GN=At3g10290 PE=3 SV=1

 Score =  376 bits (965), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 191/342 (55%), Positives = 258/342 (75%), Gaps = 4/342 (1%)

Query: 15  PRLSETSADHQV-LDIPATPPGDVRNNNSYTVGFGSFVSPH---IFTALIIASWYLSNIG 70
           P LS +    Q  L I +T   + +N +  +    S  SP    +F + +I  WY SNIG
Sbjct: 12  PLLSFSHQKKQPNLSISSTTKMNKKNPDQKSDMSSSSSSPKKQTLFISSLIILWYTSNIG 71

Query: 71  VLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALS 130
           VLLLNK+LLS YG+++PIFLTM HM +CA+ SYV+I FL+LVP+Q++ SR QFLK+  LS
Sbjct: 72  VLLLNKFLLSNYGFKFPIFLTMCHMSACAILSYVSIVFLKLVPLQYLKSRSQFLKVATLS 131

Query: 131 AIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGI 190
            +F  SVV GN SLRYLPVSFNQA+GATTPFFTA+FA+++T K+E+   Y AL+PVV G+
Sbjct: 132 IVFCASVVGGNISLRYLPVSFNQAVGATTPFFTALFAYIMTFKREAWVTYGALVPVVTGV 191

Query: 191 VLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALIL 250
           V+AS  EP FH FGF++C+ +TA RA KSV+QGILL+SE E+L+SMNL+LYM+P++ + L
Sbjct: 192 VIASGGEPGFHWFGFIMCISATAARAFKSVLQGILLSSEGERLNSMNLMLYMSPIAVIAL 251

Query: 251 LPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNLTNFLVTKHTSALTLQVLGN 310
           LP T+++E +V + T+    + +++  LLL N+ +AY  NL NFLVTKHTSALTLQVLGN
Sbjct: 252 LPVTIFMEPDVMSVTLTLGRQHKYMYILLLVNSVMAYSANLLNFLVTKHTSALTLQVLGN 311

Query: 311 AKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKR 352
           AK AVA V+S+L+FRNPVTVMG+ G+++T++GVV Y E K+R
Sbjct: 312 AKGAVAVVISILLFRNPVTVMGIGGYSITVLGVVAYGETKRR 353

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C521|UGAL1_ARATH UDP-galactose transporter 1 OS=Arabidopsis thaliana GN=UDP-GALT1 PE=2 SV=1

 Score =  167 bits (424), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 94/292 (32%), Positives = 164/292 (56%), Gaps = 2/292 (0%)

Query: 59  LIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHIL 118
           L I  W+  N+ V+++NK++     +++P+ ++ +H I  ++ +Y+ I  L+L P+  + 
Sbjct: 11  LAILQWWGFNVTVIIMNKWIFQKLDFKFPLSVSCVHFICSSIGAYIVIKVLKLKPLIVVD 70

Query: 119 SRKQFLKIFALSAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAE 178
              ++ +IF +S +F  ++V GN SLRY+PVSF Q I + TP  T +  +L+  K     
Sbjct: 71  PEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKYFDWR 130

Query: 179 VYCALMPVVFGIVLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNL 238
           ++ +L+P+V GI+L S +E  F++FGF   +      + K+++   LL     K  S+N 
Sbjct: 131 IWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLL--HGYKFDSINT 188

Query: 239 LLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNLTNFLVTK 298
           + YMAP + +IL    L +EG+   +  E        L ++L +  +A+ +N + F V  
Sbjct: 189 VYYMAPFATMILGIPALLLEGSGILSWFEAHPAPWSALIIILSSGVLAFCLNFSIFYVIH 248

Query: 299 HTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAK 350
            T+A+T  V GN K AVA +VS LIFRNP++ M   G  +T++G   Y   +
Sbjct: 249 STTAVTFNVAGNLKVAVAVMVSWLIFRNPISYMNAVGCGITLVGCTFYGYVR 300

UDP-galactose transporter that transports UDP-galactose, UDP-glucose and GDP-fucose.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SFE9|GONS5_ARATH GDP-mannose transporter GONST5 OS=Arabidopsis thaliana GN=GONST5 PE=2 SV=1

 Score =  163 bits (413), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 92/292 (31%), Positives = 160/292 (54%), Gaps = 2/292 (0%)

Query: 59  LIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHIL 118
           L I  W+  N+ V+++NK++     +++P+ ++ +H I  ++ +Y+ I  L+L P+  + 
Sbjct: 17  LSILQWWGFNVTVIIMNKWIFQKLDFKFPLSVSCVHFICSSIGAYIVIKVLKLKPLIVVD 76

Query: 119 SRKQFLKIFALSAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAE 178
              ++ +IF +S +F  ++V GN SLRY+PVSF Q I + TP  T +  +L+  K     
Sbjct: 77  PEDRWRRIFPMSFVFCINIVLGNISLRYIPVSFMQTIKSLTPATTVVLQWLVWRKYFDWR 136

Query: 179 VYCALMPVVFGIVLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNL 238
           ++ +L+P+V GI+L S +E  F++FGF   +      + K+++   LL     K  S+N 
Sbjct: 137 IWASLVPIVGGILLTSITELSFNVFGFCAALFGCLATSTKTILAESLL--HGYKFDSINT 194

Query: 239 LLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNLTNFLVTK 298
           + YMAP + +IL      +E N      E        L +L  +  +A+ +N + F V +
Sbjct: 195 VYYMAPFATMILGLPAFLLERNGILDWFEAHPSPWSALIILFNSGVLAFCLNFSIFYVIQ 254

Query: 299 HTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAK 350
            T+A+T  V GN K AVA  VS +IFRNP++ M   G  +T++G   Y   +
Sbjct: 255 STTAVTFNVAGNLKVAVAVFVSWMIFRNPISPMNAVGCGITLVGCTFYGYVR 306

GDP-mannose transporter that may be involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Arabidopsis thaliana (taxid: 3702)

>sp|Q3E6T0|PT525_ARATH Probable sugar phosphate/phosphate translocator At5g25400 OS=Arabidopsis thaliana GN=At5g25400 PE=2 SV=1

 Score =  116 bits (290), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 156/297 (52%), Gaps = 16/297 (5%)

Query: 61  IASWYLSNIGVLLLNKYLLS--FYGYRYPIFLTMLHMISCAVYSYVAIHFLELV-PIQHI 117
           +A W   +  V++ NKY+L    Y + +PI LTM+HM  C+  +++ I   + V P+   
Sbjct: 22  VAIWIFLSFTVIVYNKYILDKKMYDWPFPISLTMIHMSFCSTLAFLLIKVFKFVEPVS-- 79

Query: 118 LSRKQFLK-IFALSAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKE- 175
           +SR  +L+ +  + A++S S+   N++  YL VSF Q + A  P   A+++  +  KKE 
Sbjct: 80  MSRDTYLRSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMP--VAVYSIGVLFKKEG 137

Query: 176 -SAEVYCALMPVVFGIVLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLH 234
             +E    ++ + FG+ +A+  E  F ++G ++ +G+ A  A + V+  ILLTS+   L+
Sbjct: 138 FKSETMMNMLSISFGVAIAAYGEARFDVWGVILQLGAVAFEATRLVMIQILLTSKGITLN 197

Query: 235 SMNLLLYMAPMS-ALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNLTN 293
            +  L Y+AP   A + +P+ +     V    +   S   F   +   N+  A+ +NL  
Sbjct: 198 PITSLYYVAPCCLAFLFIPWIV-----VEFPILRDTSSFHFDYLIFGTNSFCAFALNLAV 252

Query: 294 FLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAK 350
           FL+   TSALT+ V G  K  +    S  + ++ VT + + G+ +  +GV  Y+ AK
Sbjct: 253 FLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGIAFLGVAYYNHAK 309

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SUV2|PT432_ARATH Probable sugar phosphate/phosphate translocator At4g32390 OS=Arabidopsis thaliana GN=At4g32390 PE=3 SV=1

 Score =  114 bits (286), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 156/296 (52%), Gaps = 14/296 (4%)

Query: 61  IASWYLSNIGVLLLNKYLLS--FYGYRYPIFLTMLHMISCAVYSYVAIHFLELV-PIQHI 117
           +A W   +  V++ NKY+L    Y + +PI LTM+HM  C+  + + I   ++V P+   
Sbjct: 22  VAIWIFLSFTVIVYNKYILDKKMYNWPFPITLTMIHMAFCSSLAVILIKVFKIVEPVS-- 79

Query: 118 LSRKQFLK-IFALSAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKES 176
           +SR  +++ +  + A++S S+   N++  YL VSF Q + A  P   A+++  +  KKES
Sbjct: 80  MSRDTYIRSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMP--VAVYSIGVLLKKES 137

Query: 177 --AEVYCALMPVVFGIVLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLH 234
             +E    ++ + FG+ +A+  E  F  +G ++ +G+ A  A + V+  ILLTS+   L+
Sbjct: 138 FKSETMTNMLSISFGVAIAAYGEAKFDTWGVMLQLGAVAFEATRLVLIQILLTSKGINLN 197

Query: 235 SMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNLTNF 294
            +  L Y+AP   + L    +++E  +    + + S   F   +   N+  A+ +NL  F
Sbjct: 198 PITSLYYVAPCCLVFLFFPWIFVELPI----LRETSSFHFDFVIFGTNSVCAFALNLAVF 253

Query: 295 LVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAK 350
           L+   TSALT+ V G  K  +    S  + ++ VT + + G+ +  +GV  Y+  K
Sbjct: 254 LLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPLNLFGYGLAFLGVAYYNHCK 309

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LFN3|PT511_ARATH Probable sugar phosphate/phosphate translocator At5g11230 OS=Arabidopsis thaliana GN=At5g11230 PE=2 SV=1

 Score =  112 bits (279), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 161/300 (53%), Gaps = 16/300 (5%)

Query: 61  IASWYLSNIGVLLLNKYLLS--FYGYRYPIFLTMLHMISCAVYSYVAIHFLELV-PIQHI 117
           +A W   +  V++ NKY+L    Y + +PI LTM+HM  C+  +++ I   + V P++  
Sbjct: 22  VAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCSTLAFLIIKVFKFVEPVK-- 79

Query: 118 LSRKQFLK-IFALSAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKE- 175
           ++R+ +L+ +  + A+++ S+   N++  YL VSF Q + A  P   A+++  +  KKE 
Sbjct: 80  MTRETYLRSVVPIGALYALSLWLSNSAYIYLSVSFIQMLKALMP--VAVYSIGVLFKKEG 137

Query: 176 -SAEVYCALMPVVFGIVLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLH 234
             ++    ++ + FG+ +A+  E  F ++G ++ +G+ A  A + V+  ILL  +  KL+
Sbjct: 138 FKSDTMMNMLSISFGVAIAAYGEARFDVWGVILQLGAVAFEATRLVLIQILLGDKGIKLN 197

Query: 235 SMNLLLYMAPMS-ALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNLTN 293
            +  L Y+AP   A + +P+ +Y+E  V   T    S       +   N+  A+ +NL  
Sbjct: 198 PITSLYYVAPCCLAFLFIPW-IYVEFPVLRDT----SSFHLDYAIFGANSFCAFALNLAV 252

Query: 294 FLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKRS 353
           FL+   TSALT+ V G  K  +    S  + ++ VT + + G+ +  +GV  Y+ AK ++
Sbjct: 253 FLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGIAFLGVAYYNHAKLQA 312

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	358
224074741	361	predicted protein [Populus trichocarpa]	0.994	0.986	0.884	0.0
255537165	360	Triose phosphate/phosphate translocator,	0.997	0.991	0.903	1e-179
224054031	361	predicted protein [Populus trichocarpa]	0.994	0.986	0.859	1e-172
225426684	352	PREDICTED: probable sugar phosphate/phos	0.983	1.0	0.877	1e-172
449460451	358	PREDICTED: probable sugar phosphate/phos	0.991	0.991	0.867	1e-170
356514182	354	PREDICTED: probable sugar phosphate/phos	0.980	0.991	0.855	1e-167
356563286	355	PREDICTED: probable sugar phosphate/phos	0.991	1.0	0.849	1e-165
388512237	354	unknown [Medicago truncatula]	0.986	0.997	0.810	1e-155
357476987	426	Solute carrier family 35 member E4 [Medi	0.974	0.819	0.814	1e-154
297849622	358	hypothetical protein ARALYDRAFT_471399 [	0.983	0.983	0.753	1e-148

>gi|224074741|ref|XP_002304449.1| predicted protein [Populus trichocarpa] gi|222841881|gb|EEE79428.1| predicted protein [Populus trichocarpa]

 Score =  645 bits (1665), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/363 (88%), Positives = 337/363 (92%), Gaps = 7/363 (1%)

Query: 1   MVEAQTWTTRRMSNPRLSE-----TSADHQVLDIPATPPGDVRNNNSYTVGFGSFVSPHI 55
           MVEAQ W TRRMSNPR+ +     T+ D QVLDIPATPPGDVRNN   TVG  S+ SP+I
Sbjct: 1   MVEAQKWATRRMSNPRIVDGTTVSTTTDDQVLDIPATPPGDVRNNAYSTVG--SYFSPNI 58

Query: 56  FTALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQ 115
            TA IIASWY+SNIGVLLLNKYLLSFYG+RYPIFLTMLHMISCA YSYVAI FLE+VP+Q
Sbjct: 59  LTAAIIASWYMSNIGVLLLNKYLLSFYGFRYPIFLTMLHMISCACYSYVAIKFLEIVPLQ 118

Query: 116 HILSRKQFLKIFALSAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKE 175
           HILSRKQF+KIFALSAIF FSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKE
Sbjct: 119 HILSRKQFMKIFALSAIFCFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKE 178

Query: 176 SAEVYCALMPVVFGIVLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHS 235
           SAEVYCAL+PVVFGIVLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHS
Sbjct: 179 SAEVYCALLPVVFGIVLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHS 238

Query: 236 MNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNLTNFL 295
           MNLLLYMAPM+ALILLPFTLYIEGNVAA TIEKAS D F++FLL GNATVAYLVNLTNFL
Sbjct: 239 MNLLLYMAPMAALILLPFTLYIEGNVAAITIEKASGDPFIVFLLAGNATVAYLVNLTNFL 298

Query: 296 VTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKRSKV 355
           VT+HTSALTLQVLGNAKAAVAAV+SVLIFRNPVTVMGM GFAVTIMGVVLYSEAKKRSKV
Sbjct: 299 VTRHTSALTLQVLGNAKAAVAAVISVLIFRNPVTVMGMAGFAVTIMGVVLYSEAKKRSKV 358

Query: 356 TTH 358
           TTH
Sbjct: 359 TTH 361

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255537165|ref|XP_002509649.1| Triose phosphate/phosphate translocator, chloroplast precursor, putative [Ricinus communis] gi|223549548|gb|EEF51036.1| Triose phosphate/phosphate translocator, chloroplast precursor, putative [Ricinus communis]

 Score =  633 bits (1632), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 326/361 (90%), Positives = 339/361 (93%), Gaps = 4/361 (1%)

Query: 1   MVEAQTWTTRRMSNPRL---SETSADHQVLDIPATPPGDVRNNNSYTVGFGSFVSPHIFT 57
           MVEAQTW TRRMSNPR+   S T+A  QVLDIPATPPGDVRNN +Y    GS+ SP + T
Sbjct: 1   MVEAQTWATRRMSNPRMDANSVTTATDQVLDIPATPPGDVRNN-AYNSTVGSYFSPTVLT 59

Query: 58  ALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHI 117
           A+IIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCA YSYVAI FLE+VP+QHI
Sbjct: 60  AMIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCACYSYVAIKFLEIVPLQHI 119

Query: 118 LSRKQFLKIFALSAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESA 177
           LSRKQFLKIFALSAIF FSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESA
Sbjct: 120 LSRKQFLKIFALSAIFCFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESA 179

Query: 178 EVYCALMPVVFGIVLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMN 237
           EVYCAL+PVVFGIVLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMN
Sbjct: 180 EVYCALLPVVFGIVLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMN 239

Query: 238 LLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNLTNFLVT 297
           LLLYMAPM+ALILLPFTLYIEGNVAA TIEKA  D F++FLL+GNATVAYLVNLTNFLVT
Sbjct: 240 LLLYMAPMAALILLPFTLYIEGNVAANTIEKAKGDPFIVFLLIGNATVAYLVNLTNFLVT 299

Query: 298 KHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKRSKVTT 357
           KHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKRSKVTT
Sbjct: 300 KHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKRSKVTT 359

Query: 358 H 358
           H
Sbjct: 360 H 360

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224054031|ref|XP_002298084.1| predicted protein [Populus trichocarpa] gi|222845342|gb|EEE82889.1| predicted protein [Populus trichocarpa]

 Score =  611 bits (1576), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 312/363 (85%), Positives = 332/363 (91%), Gaps = 7/363 (1%)

Query: 1   MVEAQTWTTRRMSNPRLSE-----TSADHQVLDIPATPPGDVRNNNSYTVGFGSFVSPHI 55
           MVEAQTW TRRMSNPR+ +     T+ + Q LDIPATPPGDVRNN   +VG  S+ SP I
Sbjct: 1   MVEAQTWATRRMSNPRIMDGTTVSTTTNDQALDIPATPPGDVRNNAYSSVG--SYFSPTI 58

Query: 56  FTALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQ 115
            TA IIASWYLSNIGVLLLNKYLLSF+GYRYPIFLTMLHMISCA YSYVAI FL++VP+Q
Sbjct: 59  LTAGIIASWYLSNIGVLLLNKYLLSFHGYRYPIFLTMLHMISCACYSYVAIKFLQIVPLQ 118

Query: 116 HILSRKQFLKIFALSAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKE 175
           HI SRKQF+KIFALSAIF FSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKE
Sbjct: 119 HISSRKQFMKIFALSAIFCFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKE 178

Query: 176 SAEVYCALMPVVFGIVLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHS 235
           SA VYCAL+PVVFGIVLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHS
Sbjct: 179 SAGVYCALLPVVFGIVLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHS 238

Query: 236 MNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNLTNFL 295
           MNLLLYMAPM+ALILLPFTLYIEGNVA+ TIEKA  D +++FLL+GN+TVAYLVNLTNFL
Sbjct: 239 MNLLLYMAPMAALILLPFTLYIEGNVASITIEKARGDPYIVFLLIGNSTVAYLVNLTNFL 298

Query: 296 VTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKRSKV 355
           VTKHTSALTLQVLGNAKAAVAA VS+LIFRNPVT MGM GFAVTIMGVVLYSEAKKRSKV
Sbjct: 299 VTKHTSALTLQVLGNAKAAVAAAVSILIFRNPVTAMGMVGFAVTIMGVVLYSEAKKRSKV 358

Query: 356 TTH 358
           TTH
Sbjct: 359 TTH 361

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225426684|ref|XP_002281623.1| PREDICTED: probable sugar phosphate/phosphate translocator At1g12500 isoform 1 [Vitis vinifera] gi|359474280|ref|XP_003631429.1| PREDICTED: probable sugar phosphate/phosphate translocator At1g12500 isoform 2 [Vitis vinifera] gi|297742646|emb|CBI34795.3| unnamed protein product [Vitis vinifera]

 Score =  609 bits (1571), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 314/358 (87%), Positives = 334/358 (93%), Gaps = 6/358 (1%)

Query: 1   MVEAQTWTTRRMSNPRLSETSADHQVLDIPATPPGDVRNNNSYTVGFGSFVSPHIFTALI 60
           MVEAQTWTTRR SNPRL  T    QV+DIPATPPG VRN+ +     GSF+SP++ TALI
Sbjct: 1   MVEAQTWTTRRGSNPRLETT---EQVVDIPATPPGGVRNSGN---AIGSFLSPNVLTALI 54

Query: 61  IASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSR 120
           IASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHM+SCA YSY AI++LELVP+QHILSR
Sbjct: 55  IASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMLSCAGYSYAAINWLELVPLQHILSR 114

Query: 121 KQFLKIFALSAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVY 180
           +QFLKIFALSAIF FSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKE+ EVY
Sbjct: 115 RQFLKIFALSAIFCFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKETGEVY 174

Query: 181 CALMPVVFGIVLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLL 240
            AL+PVVFGIVLASNSEPLFHLFGFL+C+GSTAGRALKSVVQGILLTSEAEKLHSMNLLL
Sbjct: 175 LALLPVVFGIVLASNSEPLFHLFGFLICIGSTAGRALKSVVQGILLTSEAEKLHSMNLLL 234

Query: 241 YMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNLTNFLVTKHT 300
           YMAPM+ALILLPFTLYIEGNVAA T+EKA  D F++FLL+GNATVAYLVNLTNFLVTKHT
Sbjct: 235 YMAPMAALILLPFTLYIEGNVAAFTVEKARGDSFIIFLLIGNATVAYLVNLTNFLVTKHT 294

Query: 301 SALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKRSKVTTH 358
           SALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKRSKVTTH
Sbjct: 295 SALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKRSKVTTH 352

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449460451|ref|XP_004147959.1| PREDICTED: probable sugar phosphate/phosphate translocator At1g12500-like [Cucumis sativus] gi|449494278|ref|XP_004159500.1| PREDICTED: probable sugar phosphate/phosphate translocator At1g12500-like [Cucumis sativus]

 Score =  605 bits (1560), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 313/361 (86%), Positives = 334/361 (92%), Gaps = 6/361 (1%)

Query: 1   MVEAQTWTTRRMSNPRL-SETSADHQVLDIPATPPGDVRNNNSYTVGF--GSFVSPHIFT 57
           MVEAQTWTTRRMSNPRL S T+A  Q LDIP TPP DVRN+ +   GF  GS +SP++ T
Sbjct: 1   MVEAQTWTTRRMSNPRLDSSTAAADQALDIPMTPPSDVRNSAA---GFPIGSHLSPNLLT 57

Query: 58  ALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHI 117
            +II SWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHM++CA YSY+AI+FLE+VP+QHI
Sbjct: 58  VVIILSWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMLACAAYSYIAINFLEIVPLQHI 117

Query: 118 LSRKQFLKIFALSAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESA 177
           LSRKQF KIFALSAIF FSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESA
Sbjct: 118 LSRKQFFKIFALSAIFCFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESA 177

Query: 178 EVYCALMPVVFGIVLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMN 237
           EVY AL+PVVFGIVLASNSEPLFH FGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMN
Sbjct: 178 EVYLALLPVVFGIVLASNSEPLFHFFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMN 237

Query: 238 LLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNLTNFLVT 297
           LLLYMAPM+A+ILLPF+LYIEGNVAA T+EKA  + F++FLLLGNATVAYLVNLTNFLVT
Sbjct: 238 LLLYMAPMAAMILLPFSLYIEGNVAAITVEKARGNSFIVFLLLGNATVAYLVNLTNFLVT 297

Query: 298 KHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKRSKVTT 357
           KHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGM GFAVTIMGVVLYSEAKKRSKVTT
Sbjct: 298 KHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMAGFAVTIMGVVLYSEAKKRSKVTT 357

Query: 358 H 358
           H
Sbjct: 358 H 358

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356514182|ref|XP_003525785.1| PREDICTED: probable sugar phosphate/phosphate translocator At1g12500-like [Glycine max]

 Score =  594 bits (1531), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 309/361 (85%), Positives = 331/361 (91%), Gaps = 10/361 (2%)

Query: 1   MVEAQTWTTRRMSNPRLSETSADHQVLDIPATPPGDVRNNNSYTVGFGSF---VSPHIFT 57
           MVEAQTWTTRRMSNPRL +TS   QVLDIP TPPG++RN+      FGS    +SP + T
Sbjct: 1   MVEAQTWTTRRMSNPRL-DTSTTDQVLDIPPTPPGELRNS------FGSNPNNLSPTLLT 53

Query: 58  ALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHI 117
           ALII+SWYLSNIGVLLLNKYLLSFYGYR+PIFLTMLHM+SCA YSY +I+FLELVP+QHI
Sbjct: 54  ALIISSWYLSNIGVLLLNKYLLSFYGYRFPIFLTMLHMLSCAAYSYASINFLELVPLQHI 113

Query: 118 LSRKQFLKIFALSAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESA 177
            S+KQFLKIFALSAIF FSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKE+ 
Sbjct: 114 HSKKQFLKIFALSAIFCFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKETG 173

Query: 178 EVYCALMPVVFGIVLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMN 237
           EVY AL+PVVFGIV+ASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMN
Sbjct: 174 EVYLALLPVVFGIVVASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMN 233

Query: 238 LLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNLTNFLVT 297
           LLLYMAP++A+ILLPFTLYIEGNV A TIEKA  D F++FLLLGNATVAYLVNLTNFLVT
Sbjct: 234 LLLYMAPLAAMILLPFTLYIEGNVLALTIEKAKGDPFIVFLLLGNATVAYLVNLTNFLVT 293

Query: 298 KHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKRSKVTT 357
           KHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGM GF +TIMGVVLYSEAKKRSKVTT
Sbjct: 294 KHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMAGFGITIMGVVLYSEAKKRSKVTT 353

Query: 358 H 358
           H
Sbjct: 354 H 354

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356563286|ref|XP_003549895.1| PREDICTED: probable sugar phosphate/phosphate translocator At1g12500-like [Glycine max]

 Score =  588 bits (1516), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 304/358 (84%), Positives = 327/358 (91%), Gaps = 3/358 (0%)

Query: 1   MVEAQTWTTRRMSNPRLSETSADHQVLDIPATPPGDVRNNNSYTVGFGSFVSPHIFTALI 60
           MVEAQTWTTRRMSNPRL  T+ D  V+DIP TPPG++RN  S+     + +SP + TALI
Sbjct: 1   MVEAQTWTTRRMSNPRLDTTTTD-PVVDIPPTPPGELRN--SFGSNPNNNLSPTLVTALI 57

Query: 61  IASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSR 120
           I+SWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHM+SCA YSY +I+FLELVP+QHI S+
Sbjct: 58  ISSWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMLSCAAYSYASINFLELVPLQHIHSK 117

Query: 121 KQFLKIFALSAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVY 180
           KQF KI ALSAIF FSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKE+ EVY
Sbjct: 118 KQFFKILALSAIFCFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKETGEVY 177

Query: 181 CALMPVVFGIVLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLL 240
            AL+PVVFGIV+ASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLL
Sbjct: 178 LALLPVVFGIVVASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLL 237

Query: 241 YMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNLTNFLVTKHT 300
           YMAP++ALILLPFTLYIEGNV A T+EKA  D F++FLLLGNATVAYLVNLTNFLVTKHT
Sbjct: 238 YMAPLAALILLPFTLYIEGNVLALTVEKAKGDPFIVFLLLGNATVAYLVNLTNFLVTKHT 297

Query: 301 SALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKRSKVTTH 358
           SALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGM GF +TIMGVVLYSEAKKRSKVTTH
Sbjct: 298 SALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMAGFGITIMGVVLYSEAKKRSKVTTH 355

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388512237|gb|AFK44180.1| unknown [Medicago truncatula]

 Score =  553 bits (1424), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 291/359 (81%), Positives = 315/359 (87%), Gaps = 6/359 (1%)

Query: 1   MVEAQTWTTRRMSNPRLSETSADHQV-LDIPATPPGDVRNNNSYTVGFGSFVSPHIFTAL 59
           MVEAQTWTTRRMSNPRL     + Q+ LDIP TPP D RNN S         +  + T+L
Sbjct: 1   MVEAQTWTTRRMSNPRLHTLDTNDQLQLDIPQTPPSDQRNNGSNIN-----NNNLVTTSL 55

Query: 60  IIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILS 119
           IIASWY SNIGVLLLNKYLLSFYGYRYPIFLTMLHM+SCA YSY AI+ ++ VP Q I S
Sbjct: 56  IIASWYFSNIGVLLLNKYLLSFYGYRYPIFLTMLHMLSCAAYSYAAINVVQFVPYQQIHS 115

Query: 120 RKQFLKIFALSAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEV 179
           +KQFLKIFALSAIF FSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKE+AEV
Sbjct: 116 KKQFLKIFALSAIFCFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKETAEV 175

Query: 180 YCALMPVVFGIVLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLL 239
           Y AL+PVV GIV+++NSEPLFHLFGFLVCVGSTAGRALKSVVQGI+LTSEAEKLHSMNLL
Sbjct: 176 YLALLPVVLGIVVSTNSEPLFHLFGFLVCVGSTAGRALKSVVQGIILTSEAEKLHSMNLL 235

Query: 240 LYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNLTNFLVTKH 299
           LYMAP++A+ILLP TLYIEGNV A TIEKA  D F++FLL+GNATVAYLVNLTNFLVTKH
Sbjct: 236 LYMAPLAAMILLPVTLYIEGNVFAITIEKARSDPFIVFLLIGNATVAYLVNLTNFLVTKH 295

Query: 300 TSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKRSKVTTH 358
           TSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGF +T MGVVLYSEAKKRSK  +H
Sbjct: 296 TSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFGITTMGVVLYSEAKKRSKGASH 354

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357476987|ref|XP_003608779.1| Solute carrier family 35 member E4 [Medicago truncatula] gi|355509834|gb|AES90976.1| Solute carrier family 35 member E4 [Medicago truncatula]

 Score =  552 bits (1422), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 289/355 (81%), Positives = 312/355 (87%), Gaps = 6/355 (1%)

Query: 1   MVEAQTWTTRRMSNPRLSETSADHQV-LDIPATPPGDVRNNNSYTVGFGSFVSPHIFTAL 59
           MVEAQTWTTRRMSNPRL     + Q+ LDIP TPP D R       G     +  + T+L
Sbjct: 1   MVEAQTWTTRRMSNPRLHTLDTNDQLQLDIPQTPPSDQR-----NNGSNINNNNLVTTSL 55

Query: 60  IIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILS 119
           IIASWY SNIGVLLLNKYLLSFYGYRYPIFLTMLHM+SCA YSY AI+ ++ VP Q I S
Sbjct: 56  IIASWYFSNIGVLLLNKYLLSFYGYRYPIFLTMLHMLSCAAYSYAAINVVQFVPYQQIHS 115

Query: 120 RKQFLKIFALSAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEV 179
           +KQFLKIFALSAIF FSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKE+AEV
Sbjct: 116 KKQFLKIFALSAIFCFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKETAEV 175

Query: 180 YCALMPVVFGIVLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLL 239
           Y AL+PVV GIV+++NSEPLFHLFGFLVCVGSTAGRALKSVVQGI+LTSEAEKLHSMNLL
Sbjct: 176 YLALLPVVLGIVVSTNSEPLFHLFGFLVCVGSTAGRALKSVVQGIILTSEAEKLHSMNLL 235

Query: 240 LYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNLTNFLVTKH 299
           LYMAP++A+ILLP TLYIEGNV A TIEKA  D F++FLL+GNATVAYLVNLTNFLVTKH
Sbjct: 236 LYMAPLAAMILLPVTLYIEGNVFAITIEKARSDPFIVFLLIGNATVAYLVNLTNFLVTKH 295

Query: 300 TSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKRSK 354
           TSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGF +TIMGVVLYSEAKKRSK
Sbjct: 296 TSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFGITIMGVVLYSEAKKRSK 350

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297849622|ref|XP_002892692.1| hypothetical protein ARALYDRAFT_471399 [Arabidopsis lyrata subsp. lyrata] gi|297338534|gb|EFH68951.1| hypothetical protein ARALYDRAFT_471399 [Arabidopsis lyrata subsp. lyrata]

 Score =  530 bits (1366), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 269/357 (75%), Positives = 300/357 (84%), Gaps = 5/357 (1%)

Query: 1   MVEAQTWTTRRMSNPRLSETSADHQVLDIPATPPGDVRNN--NSYTVGFGSFVSPHIFTA 58
           MVEAQ+WTTRRMSNPR    +A   ++DIP TPP    ++    + + F + VSP I TA
Sbjct: 1   MVEAQSWTTRRMSNPRFD--AATPTIVDIPGTPPHSSASSPLKPFFLSFPT-VSPTILTA 57

Query: 59  LIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHIL 118
            IIA+W+ SNIGVLLLNKYLL +YG+RYPIFLTM HM+SCA YS   I+   +VP QHIL
Sbjct: 58  AIIAAWFGSNIGVLLLNKYLLFYYGFRYPIFLTMTHMLSCAAYSSAVINVAGIVPRQHIL 117

Query: 119 SRKQFLKIFALSAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAE 178
           SR+QFLKI +LSAIF  SVVCGNTSLRY+PVSFNQAIGATTPFFTA+F+FLITCK ES E
Sbjct: 118 SRRQFLKILSLSAIFCLSVVCGNTSLRYIPVSFNQAIGATTPFFTAVFSFLITCKTESTE 177

Query: 179 VYCALMPVVFGIVLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNL 238
           VY AL+PVV GIVLASNSEP FHLFGFL+CV STAGRALKSVVQGI+LTSE+EKLHSMNL
Sbjct: 178 VYLALLPVVSGIVLASNSEPSFHLFGFLICVASTAGRALKSVVQGIILTSESEKLHSMNL 237

Query: 239 LLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNLTNFLVTK 298
           LLYMAPM+A ILLPFTLYIEGNV    IEKA  D  ++FLL GNATVAYLVNLTNFLVTK
Sbjct: 238 LLYMAPMAACILLPFTLYIEGNVLRVLIEKARTDPLIIFLLAGNATVAYLVNLTNFLVTK 297

Query: 299 HTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKRSKV 355
           HTSALTLQVLGN KAAVAA VSVLIFRNPVTVMG+ GF VTIMGVVLYSEA+KRSK+
Sbjct: 298 HTSALTLQVLGNGKAAVAAGVSVLIFRNPVTVMGIAGFGVTIMGVVLYSEARKRSKL 354

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	358
TAIR|locus:2034730	361	AT1G12500 [Arabidopsis thalian	0.991	0.983	0.683	4.6e-121
TAIR|locus:2074713	308	AT3G11320 [Arabidopsis thalian	0.835	0.970	0.598	9.6e-89
TAIR|locus:2166384	309	AT5G05820 [Arabidopsis thalian	0.835	0.967	0.595	5.3e-88
TAIR|locus:2146683	309	AT5G04160 "AT5G04160" [Arabido	0.832	0.964	0.550	1.7e-84
TAIR|locus:2076239	355	AT3G10290 [Arabidopsis thalian	0.944	0.952	0.5	5e-83
DICTYBASE|DDB_G0287319	348	DDB_G0287319 "TPT transporter	0.810	0.833	0.344	5.9e-41
TAIR|locus:2204690	336	AT1G77610 [Arabidopsis thalian	0.807	0.860	0.289	5.1e-35
TAIR|locus:2201138	341	GONST5 "golgi nucleotide sugar	0.807	0.847	0.289	5.8e-34
TAIR|locus:2145487	349	AT5G25400 [Arabidopsis thalian	0.798	0.819	0.282	9.4e-27
TAIR|locus:2127841	350	AT4G32390 [Arabidopsis thalian	0.782	0.8	0.281	1.5e-26

TAIR|locus:2034730 AT1G12500 [Arabidopsis thaliana (taxid:3702)]

 Score = 1191 (424.3 bits), Expect = 4.6e-121, P = 4.6e-121
 Identities = 244/357 (68%), Positives = 271/357 (75%)

Query:     1 MVEAQTWTTRRMSNPRL-SETSADHQVLDIPATPPGDVRNNNSYTVGFGS-FVSPHIFTA 58
             MVEAQ+WTTRRMSNPR  +  +A   ++DIP TPP    ++        S  VSP I TA
Sbjct:     1 MVEAQSWTTRRMSNPRFDAAATAAPTIVDIPGTPPHSSASSPLKPFFLSSPTVSPTILTA 60

Query:    59 LIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHIL 118
              IIA+W+ SNIGVLLLNKYLL +YG+RYPIFLTM HM+SCA YS   I+   +VP QHIL
Sbjct:    61 AIIAAWFGSNIGVLLLNKYLLFYYGFRYPIFLTMTHMLSCAAYSSAVINIAGIVPRQHIL 120

Query:   119 SRKQFLKIFALSAIFSFSVVCGNTSLRYLPVSFNQXXXXXXXXXXXXXXXXXXCKKESAE 178
             SR+QFLKI +LSAIF  SVVCGNTSLRY+PVSFNQ                  CK ES E
Sbjct:   121 SRRQFLKILSLSAIFCLSVVCGNTSLRYIPVSFNQAIGATTPFFTAVFSFLITCKTESTE 180

Query:   179 VYCALMPVVFGIVLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNL 238
             VY AL+PVV GIVLASNSEP FHLFGFL+CV STAGRALKSVVQGI+LTSE+EKLHSMNL
Sbjct:   181 VYLALLPVVSGIVLASNSEPSFHLFGFLICVASTAGRALKSVVQGIILTSESEKLHSMNL 240

Query:   239 LLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNLTNFLVTK 298
             LLYMAPM+A ILLPFTLYIEGNV    IEKA  D  ++FLL GNATVAYLVNLTNFLVTK
Sbjct:   241 LLYMAPMAACILLPFTLYIEGNVLRVLIEKARTDPLIIFLLAGNATVAYLVNLTNFLVTK 300

Query:   299 HTSALTLQVLGNXXXXXXXXXXXLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKRSKV 355
             HTSALTLQVLGN           LIFRNPVTVMG+ GF VTIMGVVLYSEA+KRSK+
Sbjct:   301 HTSALTLQVLGNGKAAVAAGVSVLIFRNPVTVMGIAGFGVTIMGVVLYSEARKRSKL 357

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0030243 "cellulose metabolic process" evidence=RCA

TAIR|locus:2074713 AT3G11320 [Arabidopsis thaliana (taxid:3702)]

 Score = 886 (316.9 bits), Expect = 9.6e-89, P = 9.6e-89
 Identities = 179/299 (59%), Positives = 221/299 (73%)

Query:    56 FTALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQ 115
             FT  ++ASWY SNIGVLLLNKYLLS YG++YPIFLTM HM +C++ SYVAI ++++VP+Q
Sbjct:    10 FTIGLVASWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLLSYVAIAWMKMVPMQ 69

Query:   116 HILSRKQFLKIFALSAIFSFSVVCGNTSLRYLPVSFNQXXXXXXXXXXXXXXXXXXCKKE 175
              I SR QFLKI ALS +F  SVV GN SLR+LPVSFNQ                   K+E
Sbjct:    70 TIRSRVQFLKIAALSLVFCVSVVFGNISLRFLPVSFNQAIGATTPFFTAVFAYLITFKRE 129

Query:   176 SAEVYCALMPVVFGIVLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHS 235
             +   Y  L+PVV G+V+AS SEP FHLFGF++C+ +TA RALKSV+QGILL+SE EKL+S
Sbjct:   130 AWLTYFTLVPVVTGVVIASGSEPSFHLFGFIMCIAATAARALKSVLQGILLSSEGEKLNS 189

Query:   236 MNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNLTNFL 295
             MNLLLYMAP++ + LLP TL +E NV   TI  A +D  +++ LL N+ +AY VNLTNFL
Sbjct:   190 MNLLLYMAPIAVVFLLPATLIMEKNVVGITIALARDDFRIVWYLLFNSALAYFVNLTNFL 249

Query:   296 VTKHTSALTLQVLGNXXXXXXXXXXXLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKRSK 354
             VTKHTSALTLQVLGN           LIFRNPV+V GM G+++T+ GV+LYSEAKKRSK
Sbjct:   250 VTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMLGYSLTVCGVILYSEAKKRSK 308

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

TAIR|locus:2166384 AT5G05820 [Arabidopsis thaliana (taxid:3702)]

 Score = 879 (314.5 bits), Expect = 5.3e-88, P = 5.3e-88
 Identities = 178/299 (59%), Positives = 220/299 (73%)

Query:    56 FTALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQ 115
             FT  ++ASWY SNIGVLLLNKYLLS YG++YPIFLTM HM +C++ SYVAI +L++VP+Q
Sbjct:    10 FTIGLVASWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLLSYVAIAWLKMVPMQ 69

Query:   116 HILSRKQFLKIFALSAIFSFSVVCGNTSLRYLPVSFNQXXXXXXXXXXXXXXXXXXCKKE 175
              I SR QF KI ALS +F  SVV GN SLR+LPVSFNQ                   KKE
Sbjct:    70 TIRSRVQFFKIAALSLVFCVSVVFGNISLRFLPVSFNQAIGATTPFFTAVFAYLMTRKKE 129

Query:   176 SAEVYCALMPVVFGIVLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHS 235
             +   Y  L+PVV G+V+AS  EP FHLFGFL+C+ +TA RALKSV+QGILL+SE EKL+S
Sbjct:   130 AWLTYFTLVPVVTGVVIASGGEPSFHLFGFLMCIAATAARALKSVLQGILLSSEGEKLNS 189

Query:   236 MNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNLTNFL 295
             MNLLLYMAP++ ++LLP TL +E NV   TI  A +D  +++ LL N+ +AYLVNLTNFL
Sbjct:   190 MNLLLYMAPIAVVLLLPATLIMEKNVVGITIALARDDFRIVWYLLFNSALAYLVNLTNFL 249

Query:   296 VTKHTSALTLQVLGNXXXXXXXXXXXLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKRSK 354
             VT HTSALTLQVLGN           LIF+NPV+V GM G+++T+ GV+LYSEAKKR+K
Sbjct:   250 VTNHTSALTLQVLGNAKGAVAVVVSILIFKNPVSVTGMLGYSLTVCGVILYSEAKKRNK 308

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2146683 AT5G04160 "AT5G04160" [Arabidopsis thaliana (taxid:3702)]

 Score = 846 (302.9 bits), Expect = 1.7e-84, P = 1.7e-84
 Identities = 164/298 (55%), Positives = 216/298 (72%)

Query:    55 IFTALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPI 114
             +F + +I SWY SNIGVLLLNK+LLS YG+++PIFLTM HM +CA+ SY++I FL+LVP+
Sbjct:    10 LFISTLIISWYSSNIGVLLLNKFLLSNYGFKFPIFLTMCHMSACAILSYISIVFLKLVPL 69

Query:   115 QHILSRKQFLKIFALSAIFSFSVVCGNTSLRYLPVSFNQXXXXXXXXXXXXXXXXXXCKK 174
             QH+ SR QFLK+  LS +F  SVV GN SLRYLPVSFNQ                   K+
Sbjct:    70 QHLKSRSQFLKVATLSIVFCASVVGGNISLRYLPVSFNQAVGATTPFFTALFAYLMTFKR 129

Query:   175 ESAEVYCALMPVVFGIVLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLH 234
             E+   Y AL+PVV G+V+AS  EP FH FGF++C+ +TA RA KSV+QGILL+SE EKL+
Sbjct:   130 EAWVTYGALVPVVAGVVIASGGEPGFHWFGFIMCISATAARAFKSVLQGILLSSEGEKLN 189

Query:   235 SMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNLTNF 294
             SMNL+LYM+P++ + LLP TL++E +V + T+  A + +++  LLL N+ +AY  NL NF
Sbjct:   190 SMNLMLYMSPIAVIALLPVTLFMEPDVISVTLTLAKQHQYMWILLLVNSVMAYSANLLNF 249

Query:   295 LVTKHTSALTLQVLGNXXXXXXXXXXXLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKR 352
             LVTKHTSALTLQVLGN           LIF+NPVTVMG+ G+++T++GVV Y E K+R
Sbjct:   250 LVTKHTSALTLQVLGNAKGAVAVVISILIFQNPVTVMGIGGYSITVLGVVAYGETKRR 307

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2076239 AT3G10290 [Arabidopsis thaliana (taxid:3702)]

 Score = 832 (297.9 bits), Expect = 5.0e-83, P = 5.0e-83
 Identities = 171/342 (50%), Positives = 231/342 (67%)

Query:    15 PRLSETSADHQV-LDIPATPPGDVRNNNSYTVGFGSFVSPH---IFTALIIASWYLSNIG 70
             P LS +    Q  L I +T   + +N +  +    S  SP    +F + +I  WY SNIG
Sbjct:    12 PLLSFSHQKKQPNLSISSTTKMNKKNPDQKSDMSSSSSSPKKQTLFISSLIILWYTSNIG 71

Query:    71 VLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALS 130
             VLLLNK+LLS YG+++PIFLTM HM +CA+ SYV+I FL+LVP+Q++ SR QFLK+  LS
Sbjct:    72 VLLLNKFLLSNYGFKFPIFLTMCHMSACAILSYVSIVFLKLVPLQYLKSRSQFLKVATLS 131

Query:   131 AIFSFSVVCGNTSLRYLPVSFNQXXXXXXXXXXXXXXXXXXCKKESAEVYCALMPVVFGI 190
              +F  SVV GN SLRYLPVSFNQ                   K+E+   Y AL+PVV G+
Sbjct:   132 IVFCASVVGGNISLRYLPVSFNQAVGATTPFFTALFAYIMTFKREAWVTYGALVPVVTGV 191

Query:   191 VLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALIL 250
             V+AS  EP FH FGF++C+ +TA RA KSV+QGILL+SE E+L+SMNL+LYM+P++ + L
Sbjct:   192 VIASGGEPGFHWFGFIMCISATAARAFKSVLQGILLSSEGERLNSMNLMLYMSPIAVIAL 251

Query:   251 LPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNLTNFLVTKHTSALTLQVLGN 310
             LP T+++E +V + T+    + +++  LLL N+ +AY  NL NFLVTKHTSALTLQVLGN
Sbjct:   252 LPVTIFMEPDVMSVTLTLGRQHKYMYILLLVNSVMAYSANLLNFLVTKHTSALTLQVLGN 311

Query:   311 XXXXXXXXXXXLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKR 352
                        L+FRNPVTVMG+ G+++T++GVV Y E K+R
Sbjct:   312 AKGAVAVVISILLFRNPVTVMGIGGYSITVLGVVAYGETKRR 353

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

DICTYBASE|DDB_G0287319 DDB_G0287319 "TPT transporter family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
 Identities = 104/302 (34%), Positives = 163/302 (53%)

Query:    61 IASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHIL-S 119
             +A W++ NI  L+LNKY+ S   + YPI LT +HM  C + S   +   +L+P+  +  S
Sbjct:    21 LALWFILNISTLILNKYIYSSLYFYYPITLTAIHMFVCWIGSVAVLRVYKLIPLITVQWS 80

Query:   120 RKQFLKIFALSAIFSFSVVCGNTSLRYLPVSFNQXXXXXXXXXXXXXXXXXXC----KKE 175
              KQF+ I  LS +F  ++V GN SLR++PVSF Q                       KK 
Sbjct:    81 GKQFINIMILSILFCSNIVFGNVSLRWVPVSFMQTVKSSVPLFTVILTTLFFSNIGGKKT 140

Query:   176 SAE--VYCALMPVVFGIVLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKL 233
             +     Y +++P+V G+ +AS SE  F+  GF+  + S+   A+ ++V G++LT   +++
Sbjct:   141 TFTRGTYLSMIPIVGGVCVASLSEVNFNQAGFIAALASSILSAVFAIVSGLILT---QQM 197

Query:   234 HSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNLTN 293
             +++NLL YM+P+S  +L P + ++E N  A       E + ++ LLL +  +A+L+N   
Sbjct:   198 NAVNLLYYMSPISCCLLFPLSAFMEWNAIANEWPLYGESKPIVILLL-SGLIAFLLNTFT 256

Query:   294 FLVTKHTSALTLQVLGNXXXXXXXXXXXLIFRNPVTVMGMTGFAVTIMGVVLYSEAK-KR 352
             FLV K TS LT  V GN           L+F+N      + G A+ IMGVV YS  K + 
Sbjct:   257 FLVIKLTSPLTYTVSGNLKVVLSISISILVFKNETNFFNVLGCAIAIMGVVCYSNIKYEE 316

Query:   353 SK 354
             SK
Sbjct:   317 SK 318

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2204690 AT1G77610 [Arabidopsis thaliana (taxid:3702)]

 Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
 Identities = 85/294 (28%), Positives = 153/294 (52%)

Query:    55 IFTALI-IASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVP 113
             +F +L+ I  W+  N+ V+++NK++     +++P+ ++ +H I  ++ +Y+ I  L+L P
Sbjct:     6 MFRSLLAILQWWGFNVTVIIMNKWIFQKLDFKFPLSVSCVHFICSSIGAYIVIKVLKLKP 65

Query:   114 IQHILSRKQFLKIFALSAIFSFSVVCGNTSLRYLPVSFNQXXXXXXXXXXXXXXXXXXCK 173
             +  +    ++ +IF +S +F  ++V GN SLRY+PVSF Q                   K
Sbjct:    66 LIVVDPEDRWRRIFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRK 125

Query:   174 KESAEVYCALMPVVFGIVLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKL 233
                  ++ +L+P+V GI+L S +E  F++FGF   +      + K+++   LL     K 
Sbjct:   126 YFDWRIWASLVPIVGGILLTSVTELSFNMFGFCAALFGCLATSTKTILAESLL--HGYKF 183

Query:   234 HSMNLLLYMAPMSALIL-LPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNLT 292
              S+N + YMAP + +IL +P  L +EG+   +  E        L ++L +  +A+ +N +
Sbjct:   184 DSINTVYYMAPFATMILGIP-ALLLEGSGILSWFEAHPAPWSALIIILSSGVLAFCLNFS 242

Query:   293 NFLVTKHTSALTLQVLGNXXXXXXXXXXXLIFRNPVTVMGMTGFAVTIMGVVLY 346
              F V   T+A+T  V GN           LIFRNP++ M   G  +T++G   Y
Sbjct:   243 IFYVIHSTTAVTFNVAGNLKVAVAVMVSWLIFRNPISYMNAVGCGITLVGCTFY 296

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0005457 "GDP-fucose transmembrane transporter activity" evidence=IDA

GO:0005459 "UDP-galactose transmembrane transporter activity" evidence=IDA

GO:0005460 "UDP-glucose transmembrane transporter activity" evidence=IDA

GO:0015783 "GDP-fucose transport" evidence=IDA

GO:0015786 "UDP-glucose transport" evidence=IDA

GO:0072334 "UDP-galactose transmembrane transport" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2201138 GONST5 "golgi nucleotide sugar transporter 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
 Identities = 85/294 (28%), Positives = 151/294 (51%)

Query:    55 IFTALI-IASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVP 113
             +F +L+ I  W+  N+ V+++NK++     +++P+ ++ +H I  ++ +Y+ I  L+L P
Sbjct:    12 MFRSLLSILQWWGFNVTVIIMNKWIFQKLDFKFPLSVSCVHFICSSIGAYIVIKVLKLKP 71

Query:   114 IQHILSRKQFLKIFALSAIFSFSVVCGNTSLRYLPVSFNQXXXXXXXXXXXXXXXXXXCK 173
             +  +    ++ +IF +S +F  ++V GN SLRY+PVSF Q                   K
Sbjct:    72 LIVVDPEDRWRRIFPMSFVFCINIVLGNISLRYIPVSFMQTIKSLTPATTVVLQWLVWRK 131

Query:   174 KESAEVYCALMPVVFGIVLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKL 233
                  ++ +L+P+V GI+L S +E  F++FGF   +      + K+++   LL     K 
Sbjct:   132 YFDWRIWASLVPIVGGILLTSITELSFNVFGFCAALFGCLATSTKTILAESLL--HGYKF 189

Query:   234 HSMNLLLYMAPMSALIL-LPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNLT 292
              S+N + YMAP + +IL LP  L +E N      E        L +L  +  +A+ +N +
Sbjct:   190 DSINTVYYMAPFATMILGLPAFL-LERNGILDWFEAHPSPWSALIILFNSGVLAFCLNFS 248

Query:   293 NFLVTKHTSALTLQVLGNXXXXXXXXXXXLIFRNPVTVMGMTGFAVTIMGVVLY 346
              F V + T+A+T  V GN           +IFRNP++ M   G  +T++G   Y
Sbjct:   249 IFYVIQSTTAVTFNVAGNLKVAVAVFVSWMIFRNPISPMNAVGCGITLVGCTFY 302

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0015780 "nucleotide-sugar transport" evidence=IGI

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2145487 AT5G25400 [Arabidopsis thaliana (taxid:3702)]

 Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
 Identities = 86/304 (28%), Positives = 152/304 (50%)

Query:    55 IFTALIIASWYLSNIGVLLLNKYLLS--FYGYRYPIFLTMLHMISCAVYSYVAIHFLELV 112
             I +   +A W   +  V++ NKY+L    Y + +PI LTM+HM  C+  +++ I   + V
Sbjct:    16 IISYTYVAIWIFLSFTVIVYNKYILDKKMYDWPFPISLTMIHMSFCSTLAFLLIKVFKFV 75

Query:   113 -PIQHILSRKQFLK-IFALSAIFSFSVVCGNTSLRYLPVSFNQXXXXXXXXXXXXXXXXX 170
              P+   +SR  +L+ +  + A++S S+   N++  YL VSF Q                 
Sbjct:    76 EPVS--MSRDTYLRSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVLF 133

Query:   171 XCKKES--AEVYCALMPVVFGIVLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTS 228
               KKE   +E    ++ + FG+ +A+  E  F ++G ++ +G+ A  A + V+  ILLTS
Sbjct:   134 --KKEGFKSETMMNMLSISFGVAIAAYGEARFDVWGVILQLGAVAFEATRLVMIQILLTS 191

Query:   229 EAEKLHSMNLLLYMAPMS-ALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLG-NATVA 286
             +   L+ +  L Y+AP   A + +P+ + +E  +   T    S   F  +L+ G N+  A
Sbjct:   192 KGITLNPITSLYYVAPCCLAFLFIPW-IVVEFPILRDT----SSFHFD-YLIFGTNSFCA 245

Query:   287 YLVNLTNFLVTKHTSALTLQVLGNXXXXXXXXXXXLIFRNPVTVMGMTGFAVTIMGVVLY 346
             + +NL  FL+   TSALT+ V G             + ++ VT + + G+ +  +GV  Y
Sbjct:   246 FALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGIAFLGVAYY 305

Query:   347 SEAK 350
             + AK
Sbjct:   306 NHAK 309

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0010584 "pollen exine formation" evidence=RCA

TAIR|locus:2127841 AT4G32390 [Arabidopsis thaliana (taxid:3702)]

 Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
 Identities = 84/298 (28%), Positives = 150/298 (50%)

Query:    61 IASWYLSNIGVLLLNKYLLS--FYGYRYPIFLTMLHMISCAVYSYVAIHFLELV-PIQHI 117
             +A W   +  V++ NKY+L    Y + +PI LTM+HM  C+  + + I   ++V P+   
Sbjct:    22 VAIWIFLSFTVIVYNKYILDKKMYNWPFPITLTMIHMAFCSSLAVILIKVFKIVEPVS-- 79

Query:   118 LSRKQFLK-IFALSAIFSFSVVCGNTSLRYLPVSFNQXXXXXXXXXXXXXXXXXXCKKES 176
             +SR  +++ +  + A++S S+   N++  YL VSF Q                   KKES
Sbjct:    80 MSRDTYIRSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVLL--KKES 137

Query:   177 --AEVYCALMPVVFGIVLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLH 234
               +E    ++ + FG+ +A+  E  F  +G ++ +G+ A  A + V+  ILLTS+   L+
Sbjct:   138 FKSETMTNMLSISFGVAIAAYGEAKFDTWGVMLQLGAVAFEATRLVLIQILLTSKGINLN 197

Query:   235 SMNLLLYMAPMSALILLPFT-LYIEGNVAATTIEKASEDRFVLFLLLG-NATVAYLVNLT 292
              +  L Y+AP   L+ L F  +++E  +    + + S   F  F++ G N+  A+ +NL 
Sbjct:   198 PITSLYYVAPC-CLVFLFFPWIFVELPI----LRETSSFHFD-FVIFGTNSVCAFALNLA 251

Query:   293 NFLVTKHTSALTLQVLGNXXXXXXXXXXXLIFRNPVTVMGMTGFAVTIMGVVLYSEAK 350
              FL+   TSALT+ V G             + ++ VT + + G+ +  +GV  Y+  K
Sbjct:   252 VFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPLNLFGYGLAFLGVAYYNHCK 309

GO:0005886 "plasma membrane" evidence=ISM

GO:0008514 "organic anion transmembrane transporter activity" evidence=ISS

GO:0016020 "membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LDH3	PT112_ARATH	No assigned EC number	0.7535	0.9916	0.9833	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	358
pfam03151	149	pfam03151, TPT, Triose-phosphate Transporter famil	8e-29
PTZ00343	350	PTZ00343, PTZ00343, triose or hexose phosphate/pho	2e-26
TIGR00817	302	TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate	3e-16
pfam08449	303	pfam08449, UAA, UAA transporter family	2e-14
TIGR00950	260	TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Tran	2e-04
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	0.002

>gnl|CDD|217390 pfam03151, TPT, Triose-phosphate Transporter family

 Score =  108 bits (273), Expect = 8e-29
 Identities = 55/148 (37%), Positives = 86/148 (58%), Gaps = 4/148 (2%)

Query: 204 GFLVCVGSTAGRALKSVVQGILLTSEAE-KLHSMNLLLYMAPMSALILLPFTLYIEGNVA 262
           GF++ + ++A  AL+ ++   LL  +   KL+ + LL Y++P++ ++LLP  L+ EG   
Sbjct: 1   GFILALAASALFALRLILSQKLLKKKKGTKLNVLELLYYLSPVAFIVLLPGLLFSEGFKL 60

Query: 263 ATTIEKASEDR---FVLFLLLGNATVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVV 319
              I K   D      + LLL +  +A+L NL+ F +   TS LT  V G  K  V  V+
Sbjct: 61  GKFILKFFGDLKTSRYVLLLLLSGVLAFLYNLSAFGLLGRTSPLTSSVAGTVKRVVVIVL 120

Query: 320 SVLIFRNPVTVMGMTGFAVTIMGVVLYS 347
           SV+IF +PVT + + G A+ I+GVVLYS
Sbjct: 121 SVIIFGDPVTFLNILGLAIAILGVVLYS 148

This family includes transporters with a specificity for triose phosphate. Length = 149

>gnl|CDD|240371 PTZ00343, PTZ00343, triose or hexose phosphate/phosphate translocator; Provisional

 Score =  107 bits (269), Expect = 2e-26
 Identities = 86/330 (26%), Positives = 143/330 (43%), Gaps = 13/330 (3%)

Query: 31  ATPPGDVRNNNSYTVGFGSFVSPHIFTALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFL 90
           A P     +   Y   F SF +     AL+  +WY  N+  ++ NK  L+      P  +
Sbjct: 24  ALPEKAFPSKGIYHSLFESFPNFKWKLALLFLTWYALNVLYVVDNKLALNML--PLPWTI 81

Query: 91  TMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALSAIFSFSVVCGNT-SLRYLPV 149
           + L +    +++ +         I  I S K FLK F    +    V  G   S+    V
Sbjct: 82  SSLQLFVGWLFALLY-WATGFRKIPRIKSLKLFLKNFLPQGLCHLFVHFGAVISMGLGAV 140

Query: 150 SFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNSEPLFHLFGFLVCV 209
           SF   + A  P FTA+ + L   +  +   Y +L+P+V G+ LAS  E  F    F   +
Sbjct: 141 SFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAM 200

Query: 210 GSTAGRALKSVVQGILLTSEA---EKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTI 266
            S  G +L+S+     + +++   E L + N+ + +  +++LI LP  L+ EG       
Sbjct: 201 LSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVW 260

Query: 267 EKASED------RFVLFLLLGNATVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVS 320
              + +        ++F +  +    YL N   F      + +T  V    K  V  V S
Sbjct: 261 TNYTANMTNYTKGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSS 320

Query: 321 VLIFRNPVTVMGMTGFAVTIMGVVLYSEAK 350
           ++IF+  VT++G  G AV I+G +LYS  K
Sbjct: 321 IIIFQTQVTLLGYLGMAVAILGALLYSLFK 350

Length = 350

>gnl|CDD|129898 TIGR00817, tpt, Tpt phosphate/phosphoenolpyruvate translocator

 Score = 77.8 bits (192), Expect = 3e-16
 Identities = 74/305 (24%), Positives = 133/305 (43%), Gaps = 21/305 (6%)

Query: 57  TALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQH 116
           T L+   WY  N+   + NK LL+ +   YP F T++ +   ++Y  ++  +   +P + 
Sbjct: 3   TGLLFGLWYFLNVYFNIYNKKLLNVF--PYPYFKTLISLAVGSLYCLLS--WSSGLPKRL 58

Query: 117 ILSRKQFLKIFALSAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKES 176
            +S      +  ++ + +   V  N SL  + VSF   I A  PFF+ + +     ++  
Sbjct: 59  KISSALLKLLLPVAIVHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFP 118

Query: 177 AEVYCALMPVVFGIVLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSM 236
           + ++ +L+P+V G+ LAS++E  F+  GFL  + S      +++     +T ++  L   
Sbjct: 119 STLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSRNIFSKKAMTIKS--LDKT 176

Query: 237 NLLLYMAPMSALILLPFTLYIEG----------NVAATTIEKASEDRFVLFLLLGNATVA 286
           NL  Y++ MS  +L P     EG           ++   + K      V  +        
Sbjct: 177 NLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAM-----GFF 231

Query: 287 YLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLY 346
           +      F++    S LT  V    K  V  VVS+L F   ++   + G  + I GV LY
Sbjct: 232 HFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLY 291

Query: 347 SEAKK 351
           S  K 
Sbjct: 292 SRVKA 296

The 6-8 TMS Triose-phosphate Transporter (TPT) Family (TC 2.A.7.9)Functionally characterized members of the TPT family are derived from the inner envelope membranes of chloroplasts and nongreen plastids of plants. However,homologues are also present in yeast. Saccharomyces cerevisiae has three functionally uncharacterized TPT paralogues encoded within its genome. Under normal physiologicalconditions, chloroplast TPTs mediate a strict antiport of substrates, frequently exchanging an organic three carbon compound phosphate ester for inorganic phosphate (Pi).Normally, a triose-phosphate, 3-phosphoglycerate, or another phosphorylated C3 compound made in the chloroplast during photosynthesis, exits the organelle into thecytoplasm of the plant cell in exchange for Pi. However, experiments with reconstituted translocator in artificial membranes indicate that transport can also occur by achannel-like uniport mechanism with up to 10-fold higher transport rates. Channel opening may be induced by a membrane potential of large magnitude and/or by high substrateconcentrations. Nongreen plastid and chloroplast carriers, such as those from maize endosperm and root membranes, mediate transport of C3 compounds phosphorylated atcarbon atom 2, particularly phosphenolpyruvate, in exchange for Pi. These are the phosphoenolpyruvate:Pi antiporters (PPT). Glucose-6-P has also been shown to be asubstrate of some plastid translocators (GPT). The three types of proteins (TPT, PPT and GPT) are divergent in sequence as well as substrate specificity, but their substratespecificities overlap [Hypothetical proteins, Conserved]. Length = 302

>gnl|CDD|219846 pfam08449, UAA, UAA transporter family

 Score = 72.6 bits (179), Expect = 2e-14
 Identities = 65/301 (21%), Positives = 116/301 (38%), Gaps = 20/301 (6%)

Query: 65  YLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFL 124
           Y SN   +L    +   YG  +   LT    +  ++   + +   + +  + I      L
Sbjct: 12  YCSN--GVLQELIMTREYGSPFGNLLTFAQFLFISLVGLLYLLLFKKLKPRKI-----PL 64

Query: 125 KIFAL-SAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCAL 183
           K + L  A F  S V  N +L+Y+    +    +       I   LI  K+ S+  Y + 
Sbjct: 65  KTYVLIVATFFLSSVLNNEALKYISYPTHVIFKSCKLIPVMILGILIYGKRYSSLQYLSA 124

Query: 184 MPVVFGIVLA----------SNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKL 233
           + +  G+++           S         G  +  G+    AL    Q  L   +    
Sbjct: 125 LLITLGVIIFTLASAKDSKNSKLTTFSDNVGIALLFGALLMDALTGNTQEKLY--KKYGK 182

Query: 234 HSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNLTN 293
           HS  ++ Y   +S    L   L I   +  +          VLF LL N+   Y+     
Sbjct: 183 HSKEMMFYSHLLSLPFFLLGLLDIRTGLLFSAESFCLRHPSVLFYLLLNSLTQYVGQFFV 242

Query: 294 FLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKRS 353
           F +     ALT+ ++   +  V+ ++SVL+F NP+T+    G  +  +G+ LY+  KK+ 
Sbjct: 243 FYLISEFGALTVTLVTTLRKFVSLLLSVLLFGNPLTLQQWLGTLLVFLGIFLYAYLKKKK 302

Query: 354 K 354
            
Sbjct: 303 A 303

This family includes transporters with a specificity for UDP-N-acetylglucosamine. Length = 303

>gnl|CDD|233205 TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Transporter

 Score = 41.9 bits (99), Expect = 2e-04
 Identities = 57/252 (22%), Positives = 103/252 (40%), Gaps = 18/252 (7%)

Query: 99  AVYSYVAIHFLELVPIQHILSRKQFLKIFALSAIFSFSV--VCGNTSLRYLPVSFNQAIG 156
           AV+  +    L L+P+       + L    L       V  V    +++ LPV     + 
Sbjct: 21  AVFRRLIFALLLLLPLLRRRPPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAALLL 80

Query: 157 ATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNSEPL-FHLFGFLVCVGSTAGR 215
              P +  + + L+  ++    V  A +  + G VL  +   L  +  G L+ +GS    
Sbjct: 81  YLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISF 140

Query: 216 ALKSVVQGILLTSEAEKLHSMNLLLYMAP---MSALILLPFTLYIEGNVAATTIEKASED 272
           AL     G +L     K     LL +      + AL+LLPF  ++  N  A +++  +  
Sbjct: 141 AL-----GTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQALSLQWGA-- 193

Query: 273 RFVLFLLLGNATVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMG 332
             +L+L L    +AY   L N  +T         +L  A+  VA ++ +LI    +++  
Sbjct: 194 --LLYLGLIGTALAY--FLWNKGLTL-VDPSAASILALAEPLVALLLGLLILGETLSLPQ 248

Query: 333 MTGFAVTIMGVV 344
           + G A+ I  V+
Sbjct: 249 LIGGALIIAAVL 260

[Transport and binding proteins, Amino acids, peptides and amines]. Length = 260

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 39.5 bits (92), Expect = 0.002
 Identities = 57/303 (18%), Positives = 103/303 (33%), Gaps = 20/303 (6%)

Query: 54  HIFTALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVP 113
            +   L +  W L      +  K  +       P           A    + +  LE   
Sbjct: 5   LLLGLLALLLWGLLWGLSFIALKLAVE---SLDPFLFAAALRFLIAALLLLPLLLLEPRG 61

Query: 114 IQHILSRKQFLKIFALSAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCK 173
           ++  L     L +       +   +    +L+Y   S    I    P FTA+ A L+   
Sbjct: 62  LRPALRPWLLL-LLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLG 120

Query: 174 KESAEVYCA----LMPVVFGIVLASNSEPLFHLFGFLVCVGSTAGRALKSVVQGILLTSE 229
           +  + +        +  V  I+L      +  L G L+ + +    AL + +   L    
Sbjct: 121 ERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLWALYTALVKRLSRLG 180

Query: 230 AEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLV 289
                    LL    ++ L+LL F L   G    +        R  L LL        L 
Sbjct: 181 P----VTLALLLQLLLALLLLLLFFLSGFGAPILS--------RAWLLLLYLGVFSTGLA 228

Query: 290 NLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEA 349
            L  +   +   A  + +L   +   AA++ VL+   P++   + G A+ ++GV+L S  
Sbjct: 229 YLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288

Query: 350 KKR 352
            +R
Sbjct: 289 ARR 291

Length = 292

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	358
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	100.0
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	100.0
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	100.0
PLN00411	358	nodulin MtN21 family protein; Provisional	100.0
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.98
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	99.97
PRK11272	292	putative DMT superfamily transporter inner membran	99.96
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.96
PRK11689	295	aromatic amino acid exporter; Provisional	99.96
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.96
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.96
PRK15430	296	putative chloramphenical resistance permease RarD;	99.95
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.95
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.95
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.94
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.93
KOG1581	327	consensus UDP-galactose transporter related protei	99.92
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.92
KOG1580	337	consensus UDP-galactose transporter related protei	99.91
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.89
KOG2765	416	consensus Predicted membrane protein [Function unk	99.88
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.87
KOG1582	367	consensus UDP-galactose transporter related protei	99.86
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.86
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.83
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.83
COG2962	293	RarD Predicted permeases [General function predict	99.83
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.81
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.81
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.8
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.8
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.76
KOG2766	336	consensus Predicted membrane protein [Function unk	99.66
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	99.43
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	99.42
COG2510	140	Predicted membrane protein [Function unknown]	99.34
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.29
COG2510	140	Predicted membrane protein [Function unknown]	99.22
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.16
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.13
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	99.07
PRK15430	296	putative chloramphenical resistance permease RarD;	98.93
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.93
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.84
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.8
PRK13499	345	rhamnose-proton symporter; Provisional	98.69
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.68
PLN00411	358	nodulin MtN21 family protein; Provisional	98.6
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.53
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.51
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.51
PRK11272	292	putative DMT superfamily transporter inner membran	98.45
COG2962	293	RarD Predicted permeases [General function predict	98.36
PRK11689	295	aromatic amino acid exporter; Provisional	98.35
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.33
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.32
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.31
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	98.24
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.17
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	98.09
KOG2922	335	consensus Uncharacterized conserved protein [Funct	98.04
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.98
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.94
COG0697	292	RhaT Permeases of the drug/metabolite transporter	97.82
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.75
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.73
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	97.64
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.64
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.64
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.63
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.6
PRK11431	105	multidrug efflux system protein; Provisional	97.59
COG2076	106	EmrE Membrane transporters of cations and cationic	97.54
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	97.51
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	97.45
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.43
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.41
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	97.34
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.31
PRK13499	345	rhamnose-proton symporter; Provisional	97.22
COG2076	106	EmrE Membrane transporters of cations and cationic	97.11
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.07
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	97.0
PRK11431	105	multidrug efflux system protein; Provisional	96.95
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.91
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	96.85
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	96.84
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	96.83
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	96.65
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	96.56
KOG4510	346	consensus Permease of the drug/metabolite transpor	96.18
KOG1581	327	consensus UDP-galactose transporter related protei	96.14
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	95.71
KOG2765	416	consensus Predicted membrane protein [Function unk	95.54
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	95.4
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	95.38
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	95.25
KOG1580	337	consensus UDP-galactose transporter related protei	94.89
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	93.91
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	93.43
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	92.9
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	92.64
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	91.6
KOG2922	335	consensus Uncharacterized conserved protein [Funct	85.98
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	85.04
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	84.63
PF02694	107	UPF0060: Uncharacterised BCR, YnfA/UPF0060 family;	84.05
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	81.51

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=100.00  E-value=2.2e-38  Score=290.81  Aligned_cols=295  Identities=25%  Similarity=0.371  Sum_probs=251.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhhcccccccc-cHHHHHHHHHHHH
Q 018307           53 PHIFTALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHIL-SRKQFLKIFALSA  131 (358)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  131 (358)
                      ..++....++.|+..++...+.||+++++  +|+|+.++++|++++.+++.++.. .+.++.++.. .+.+++..++.|+
T Consensus        46 ~~~~~~~~~~~wy~~s~~~~~~nK~vl~~--~~~P~~l~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~llp~gl  122 (350)
T PTZ00343         46 FKWKLALLFLTWYALNVLYVVDNKLALNM--LPLPWTISSLQLFVGWLFALLYWA-TGFRKIPRIKSLKLFLKNFLPQGL  122 (350)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHh--CChhHHHHHHHHHHHHHHHHHHHH-hCCCCCCCCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999999998  888999999999999877655543 2333323332 4567889999999


Q ss_pred             HHHHHHhhhhccccccchhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhccccccchHHHHHHHHHH
Q 018307          132 IFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNSEPLFHLFGFLVCVGS  211 (358)
Q Consensus       132 ~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~~~~l~a  211 (358)
                      ++...+...+.|+++++++.++++++++|+++++++++++|||++++++.+++++++|+.+.+.+|.+.+..|++++++|
T Consensus       123 ~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s  202 (350)
T PTZ00343        123 CHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLS  202 (350)
T ss_pred             HHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHH
Confidence            99887888889999999999999999999999999999999999999999999999999999988888888999999999


Q ss_pred             HHHHHHHHHHHHHhhcccC---CCCCHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHh-----hhc-cchHHHHHHHHH
Q 018307          212 TAGRALKSVVQGILLTSEA---EKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIE-----KAS-EDRFVLFLLLGN  282 (358)
Q Consensus       212 ~~~~a~~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~  282 (358)
                      ++++++++++.|+.+++++   ++.++.+...++.+++.++++|+....|+........     ... .....+..++.+
T Consensus       203 ~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~s  282 (350)
T PTZ00343        203 NLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFFS  282 (350)
T ss_pred             HHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHHH
Confidence            9999999999999984322   2467888888889999999999988766533221110     011 112344567778


Q ss_pred             HHHHHHHHHHHHHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhhhc
Q 018307          283 ATVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAK  350 (358)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~~~  350 (358)
                      ++..+++|.+.++++++++|++.++.++++|++++++|++++||++++.+++|.++++.|+++|++.|
T Consensus       283 ~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~k  350 (350)
T PTZ00343        283 GVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLFK  350 (350)
T ss_pred             HHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhcC
Confidence            88899999999999999999999999999999999999999999999999999999999999998753

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=100.00  E-value=1.8e-37  Score=280.96  Aligned_cols=294  Identities=25%  Similarity=0.375  Sum_probs=243.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHH
Q 018307           56 FTALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALSAIFSF  135 (358)
Q Consensus        56 ~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  135 (358)
                      +..+.+..|++.++..+++||+++++  +++|+.+++.|+.++.+++.+... .+.++++ ..++++++.+++.|++++.
T Consensus         2 ~~~~~~~~w~~~~~~~~~~NK~~l~~--~~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~g~~~~~   77 (302)
T TIGR00817         2 QTGLLFGLWYFLNVYFNIYNKKLLNV--FPYPYFKTLISLAVGSLYCLLSWS-SGLPKRL-KISSALLKLLLPVAIVHTI   77 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhh--CChhHHHHHHHHHHHHHHHHHHHH-hCCCCCC-CCCHHHHHHHHHHHHHHHH
Confidence            45788999999999999999999987  888999999999998877665532 2222222 2457789999999999999


Q ss_pred             HHhhhhccccccchhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhccccccchHHHHHHHHHHHHHH
Q 018307          136 SVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNSEPLFHLFGFLVCVGSTAGR  215 (358)
Q Consensus       136 ~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~  215 (358)
                      +..+.|.+++|+++++++++++++|+++++++++++|||++++++.+++++++|+.+...++.+.+..|+++++++++++
T Consensus        78 ~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~  157 (302)
T TIGR00817        78 GHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITF  157 (302)
T ss_pred             HHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999887666677788999999999999


Q ss_pred             HHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhcchhHHH--HHhh--hccchHHHHHHHHHH-HHHHHHH
Q 018307          216 ALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAAT--TIEK--ASEDRFVLFLLLGNA-TVAYLVN  290 (358)
Q Consensus       216 a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~~-~~~~~~~  290 (358)
                      +++.++.||..  ++++.|+.+++.|++..+.+.++|.....|++....  +...  .......+...+..+ .+...+|
T Consensus       158 a~~~v~~k~~~--~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (302)
T TIGR00817       158 VSRNIFSKKAM--TIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHFYQ  235 (302)
T ss_pred             HHHHHHHHHhh--ccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHHHH
Confidence            99999999986  334789999999999999999999987766533211  1110  011112233232333 2444566


Q ss_pred             HHHHHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhhhcccccc
Q 018307          291 LTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKRSKV  355 (358)
Q Consensus       291 ~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~~~~~~~~  355 (358)
                      ...+.+++++||++.++.++++|++++++|++++||+++..+++|.++++.|+++|++.|.||++
T Consensus       236 ~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~~~~  300 (302)
T TIGR00817       236 QVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQKPK  300 (302)
T ss_pred             HHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhccCcC
Confidence            67778999999999999999999999999999999999999999999999999999988776654

specificities overlap.

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=100.00  E-value=6.2e-38  Score=276.54  Aligned_cols=301  Identities=44%  Similarity=0.670  Sum_probs=268.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHH
Q 018307           53 PHIFTALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALSAI  132 (358)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (358)
                      +.....+.+..|++++++..+.||++++.++||+|++++.++...+.+....... .+..+..+..++..++..+++|+.
T Consensus        14 ~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~-l~~~~~~~~~~~~~~~~llpl~~~   92 (316)
T KOG1441|consen   14 KILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKV-LKLVPPSKISSKLPLRTLLPLGLV   92 (316)
T ss_pred             hhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHH-hcCCCCCccccccchHHHHHHHHH
Confidence            5678888899999999999999999999888999999999977777666655554 666666666677899999999999


Q ss_pred             HHHHHhhhhccccccchhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhccccccchHHHHHHHHHHH
Q 018307          133 FSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNSEPLFHLFGFLVCVGST  212 (358)
Q Consensus       133 ~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~~~~l~a~  212 (358)
                      ++++.++.|.+++++|++++|++|++.|+++.++++++.+|++++..+.+++.++.||.+.+..|.++++.|...++++.
T Consensus        93 ~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~s~  172 (316)
T KOG1441|consen   93 FCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMISN  172 (316)
T ss_pred             HHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHH-HHHHHhcchhHHHHHhhhccchHHHHHHHHHHHHHHHHHH
Q 018307          213 AGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILL-PFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNL  291 (358)
Q Consensus       213 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (358)
                      +..++++++.|+.+++++++.|+.+++.|+++++.+.++ |+....|++.. .......++...+..++.+ ++++++|.
T Consensus       173 ~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s-v~~f~~Nl  250 (316)
T KOG1441|consen  173 LAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKF-VGFLTAPWFVTFLILLLNS-VLAFLLNL  250 (316)
T ss_pred             HHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccce-eeeeccccchhhHHHHHHH-HHHHHHHH
Confidence            999999999999997777899999999999999999999 88877776554 1111212333344444444 99999999


Q ss_pred             HHHHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhhhccccccc
Q 018307          292 TNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKRSKVT  356 (358)
Q Consensus       292 ~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~~~~~~~~~  356 (358)
                      ..|+++++++|++.++.+.+|.++.+..|+++|+|+.++.+.+|+++.+.|+++|++.|.++++.
T Consensus       251 s~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~~  315 (316)
T KOG1441|consen  251 SAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKKG  315 (316)
T ss_pred             HHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhcc
Confidence            99999999999999999999999999999999999999999999999999999999999887664

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=100.00  E-value=6e-30  Score=234.04  Aligned_cols=292  Identities=14%  Similarity=0.113  Sum_probs=221.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHH
Q 018307           54 HIFTALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALSAIF  133 (358)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  133 (358)
                      .....+.++.--.+...+..+.|..++. +.+ |..+.++|+.++++++.++.+..++.++.+..+++++......+++.
T Consensus        11 ~~~~~~~~~~~q~~~~~~~~~~k~a~~~-G~~-~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g   88 (358)
T PLN00411         11 EAVFLTAMLATETSVVGISTLFKVATSK-GLN-IYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLG   88 (358)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHC-CCC-ccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHH
Confidence            3445566666667777788889999966 788 99999999999999988877643322222222355667777777776


Q ss_pred             HHHHhhhhccccccchhHHHHHhhhHHHHHHHHHHHH------hccccchHHHHHHHHHHHhhhhhccccc---------
Q 018307          134 SFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLI------TCKKESAEVYCALMPVVFGIVLASNSEP---------  198 (358)
Q Consensus       134 ~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~------~~e~~~~~~~~~~~~~~~Gv~l~~~~~~---------  198 (358)
                      ...+.+.+.+++|++++.++++.++.|++++++++++      +|||.++++++|++++++|+.++...+.         
T Consensus        89 ~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~  168 (358)
T PLN00411         89 SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSP  168 (358)
T ss_pred             HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCccccccccc
Confidence            6667789999999999999999999999999999988      6999999999999999999998763210         


Q ss_pred             ---------------cch-HHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCH-HHHHHHHHHHHHHHHHHHHHHhcchh
Q 018307          199 ---------------LFH-LFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHS-MNLLLYMAPMSALILLPFTLYIEGNV  261 (358)
Q Consensus       199 ---------------~~~-~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~  261 (358)
                                     ..+ ..|+++.++++++|++|.+++|+..    .++++ ....+++..++.+.+.+.....++..
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~----~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~  244 (358)
T PLN00411        169 PYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIM----SEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNN  244 (358)
T ss_pred             ccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHH----HHcCcHhHHHHHHHHHHHHHHHHHHHHHccCC
Confidence                           112 4599999999999999999999986    33433 45566777777666666555544322


Q ss_pred             HHHHHhhhccchHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHH
Q 018307          262 AATTIEKASEDRFVLFLLLGNATVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIM  341 (358)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~  341 (358)
                      ...+  ...++...+. ++..++...+.+..+++++++.+|.+++++.+++|++++++|++++||++++.+++|.++++.
T Consensus       245 ~~~~--~~~~~~~~~~-i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~  321 (358)
T PLN00411        245 PSVW--IIHFDITLIT-IVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITL  321 (358)
T ss_pred             cccc--eeccchHHHH-HHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHH
Confidence            2111  1111222222 333444444555678889999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhhccccc
Q 018307          342 GVVLYSEAKKRSK  354 (358)
Q Consensus       342 g~~~~~~~~~~~~  354 (358)
                      |+++.++.++||.
T Consensus       322 Gv~l~~~~~~~~~  334 (358)
T PLN00411        322 GFYAVMWGKANEE  334 (358)
T ss_pred             HHHHHHhhhhhhh
Confidence            9999987766543

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.98  E-value=1.3e-29  Score=229.22  Aligned_cols=286  Identities=21%  Similarity=0.303  Sum_probs=236.4

Q ss_pred             HHHHHHHHHHHHHHHHHhhcCCC-chHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHhhhh
Q 018307           63 SWYLSNIGVLLLNKYLLSFYGYR-YPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALSAIFSFSVVCGN  141 (358)
Q Consensus        63 ~~~~~~~~~~~~~K~~~~~~~~~-~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (358)
                      ..+++.....++.+.+.+..... +|.++++.|++...+...+.....+    .+..++..++++++.++++.++..+.|
T Consensus         7 ~i~~~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (303)
T PF08449_consen    7 GIFGGCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK----FPKSRKIPLKKYAILSFLFFLASVLSN   82 (303)
T ss_pred             HHHHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc----ccCCCcChHHHHHHHHHHHHHHHHHHH
Confidence            33344444566677777653333 7999999999999888777766333    112355677888999999999999999


Q ss_pred             ccccccchhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhcccccc----c------hHHHHHHHHHH
Q 018307          142 TSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNSEPL----F------HLFGFLVCVGS  211 (358)
Q Consensus       142 ~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~~~----~------~~~G~~~~l~a  211 (358)
                      .+++|+|.++.+++|++.|+++++++.+++|||++++++.++++.++|+++...++..    .      ...|+++.+++
T Consensus        83 ~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~s  162 (303)
T PF08449_consen   83 AALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLS  162 (303)
T ss_pred             HHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999998855421    1      12399999999


Q ss_pred             HHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHhhhccchHHHHHHHHHHHHHHHHHH
Q 018307          212 TAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNL  291 (358)
Q Consensus       212 ~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (358)
                      .+++|...+++||.+  ++++.++.++++|.+.++.+..++.....+.....+........+..+..++..++.++..+.
T Consensus       163 l~~~a~~~~~qe~~~--~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~g~~  240 (303)
T PF08449_consen  163 LLLDAFTGVYQEKLF--KKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGALGQF  240 (303)
T ss_pred             HHHHHHHHHHHHHHH--HHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence            999999999999998  567889999999999999998887776632111112222222345577788888888888888


Q ss_pred             HHHHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhhhccccc
Q 018307          292 TNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKRSK  354 (358)
Q Consensus       292 ~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~~~~~~~  354 (358)
                      ..+.++++.||++.++++++|.+.++++++++||+++++.+|+|.++++.|..+|.+.|+|++
T Consensus       241 ~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~~  303 (303)
T PF08449_consen  241 FIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKKN  303 (303)
T ss_pred             HHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccCC
Confidence            889999999999999999999999999999999999999999999999999999999887764

; GO: 0055085 transmembrane transport

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.97  E-value=1.3e-29  Score=218.61  Aligned_cols=300  Identities=25%  Similarity=0.309  Sum_probs=259.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHH
Q 018307           53 PHIFTALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALSAI  132 (358)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (358)
                      .....+...+.++.++..+++.||++++.|+||--+++...|.+.+.+.+....+ .|..+.++ .+++..|+++|.+++
T Consensus         9 ~~~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~-~~lv~~~~-l~~~~~kk~~P~~~l   86 (314)
T KOG1444|consen    9 KQSSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKR-LGLVNFRP-LDLRTAKKWFPVSLL   86 (314)
T ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHH-hceeecCC-cChHHHHHHccHHHH
Confidence            4556678889999999999999999999977775666667999988888776655 55555544 457788899999999


Q ss_pred             HHHHHhhhhccccccchhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhccccccchHHHHHHHHHHH
Q 018307          133 FSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNSEPLFHLFGFLVCVGST  212 (358)
Q Consensus       133 ~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~~~~l~a~  212 (358)
                      +..+.+....+++|++++++++++..+|+++++.+..++|.|++...|.++..+.+|.......|.+++..|+.+.....
T Consensus        87 f~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~  166 (314)
T KOG1444|consen   87 FVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANC  166 (314)
T ss_pred             HHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHhhhccchHHHHHHHHHHHHHHHHHHH
Q 018307          213 AGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNLT  292 (358)
Q Consensus       213 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (358)
                      ++.+.+.++.|+..  +..+.+.+.+++|+++.+.+.+.....+.++.+..............+..+.++|+++++.+++
T Consensus       167 ~~~a~~~v~~kk~v--d~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~gf~isy~  244 (314)
T KOG1444|consen  167 LTTAAFVVYVKKSV--DSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMGFGISYT  244 (314)
T ss_pred             HHHHHHHHHHHHhh--ccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHHHHHHHH
Confidence            99999999999988  6677889999999999999998888877766541111111233467788899999999999999


Q ss_pred             HHHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhhhccccccc
Q 018307          293 NFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKRSKVT  356 (358)
Q Consensus       293 ~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~~~~~~~~~  356 (358)
                      .++|.+..|+++.++++......+.+.+.+++|+++++...+|..+.+.|..+|++.+.|+|+.
T Consensus       245 s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~~  308 (314)
T KOG1444|consen  245 SFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKKQ  308 (314)
T ss_pred             HHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhccC
Confidence            9999999999999999966666666666777778899999999999999999999998777654

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.96  E-value=1.6e-26  Score=208.08  Aligned_cols=274  Identities=14%  Similarity=0.124  Sum_probs=208.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHH-H
Q 018307           56 FTALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALSAIF-S  134 (358)
Q Consensus        56 ~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  134 (358)
                      ..+...++|...    ....|...++  .+ |..++++|+..+.+++.++....+. +   ..++++++.....+++. .
T Consensus        12 ~~~~~~~iWg~~----~~~~K~~~~~--~~-p~~~~~~R~~~a~l~ll~~~~~~~~-~---~~~~~~~~~~~~~g~~~~~   80 (292)
T PRK11272         12 ALFALYIIWGST----YLVIRIGVES--WP-PLMMAGVRFLIAGILLLAFLLLRGH-P---LPTLRQWLNAALIGLLLLA   80 (292)
T ss_pred             HHHHHHHHHhhH----HHHHHHHhcc--CC-HHHHHHHHHHHHHHHHHHHHHHhCC-C---CCcHHHHHHHHHHHHHHHH
Confidence            344455555554    5556988876  66 9999999999999888777653321 1   12455666666667654 5


Q ss_pred             HHHhhhhccc-cccchhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhccc-cccchHHHHHHHHHHH
Q 018307          135 FSVVCGNTSL-RYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNS-EPLFHLFGFLVCVGST  212 (358)
Q Consensus       135 ~~~~~~~~al-~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~-~~~~~~~G~~~~l~a~  212 (358)
                      .++.+.+++. ++++++.++++.++.|+++.+++.+ +|||++++++++++++++|+.++..+ +.+.+..|++++++++
T Consensus        81 ~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~  159 (292)
T PRK11272         81 VGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIAS  159 (292)
T ss_pred             HHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHH
Confidence            6677888888 9999999999999999999999975 69999999999999999999988644 3345567999999999


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHhhhccchHHHHHHHHHHHH-HHHHHH
Q 018307          213 AGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATV-AYLVNL  291 (358)
Q Consensus       213 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  291 (358)
                      ++||.+.++.||..    .+ ++.....++...+.+.+.+.....+.+..      ...+...|..++..++. ....+.
T Consensus       160 ~~~a~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~i~~l~i~~s~~~~~  228 (292)
T PRK11272        160 ASWAFGSVWSSRLP----LP-VGMMAGAAEMLAAGVVLLIASLLSGERLT------ALPTLSGFLALGYLAVFGSIIAIS  228 (292)
T ss_pred             HHHHHHHHHHHhcC----CC-cchHHHHHHHHHHHHHHHHHHHHcCCccc------ccCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999863    22 34556678888888777776654332110      01122334444444444 334445


Q ss_pred             HHHHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhhhccc
Q 018307          292 TNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKR  352 (358)
Q Consensus       292 ~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~~~~~  352 (358)
                      .++.++++.++.+.++..+++|+++++++++++||++++.+++|.++++.|+++.++.++|
T Consensus       229 l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~~  289 (292)
T PRK11272        229 AYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKYL  289 (292)
T ss_pred             HHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHhh
Confidence            6788999999999999999999999999999999999999999999999999998775554

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.96  E-value=4.5e-27  Score=210.54  Aligned_cols=274  Identities=17%  Similarity=0.166  Sum_probs=222.0

Q ss_pred             HHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHhhhhccccccchh
Q 018307           71 VLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALSAIFSFSVVCGNTSLRYLPVS  150 (358)
Q Consensus        71 ~~~~~K~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~  150 (358)
                      ....++.+-++ +.+.|.+.+++.++...++.......++..++.....+.++++.+..+++...++.+.+.|++|++.+
T Consensus        28 t~~~s~~l~~~-~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvt  106 (334)
T PF06027_consen   28 TGTFSSLLANK-GVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVLAYQYTSVT  106 (334)
T ss_pred             HHHHHHHHHhc-CccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHhhcccHh
Confidence            34445555555 78889999999998777665555443322222122234566777788999999999999999999999


Q ss_pred             HHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhccccc---------cchHHHHHHHHHHHHHHHHHHHH
Q 018307          151 FNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNSEP---------LFHLFGFLVCVGSTAGRALKSVV  221 (358)
Q Consensus       151 ~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~~---------~~~~~G~~~~l~a~~~~a~~~v~  221 (358)
                      .++++.+++.+++++++++++|+|+++.+++|++++++|++++...|.         +....|++++++++++||+++++
T Consensus       107 S~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~nV~  186 (334)
T PF06027_consen  107 SVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVSNVL  186 (334)
T ss_pred             HHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999998875432         23478999999999999999999


Q ss_pred             HHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 018307          222 QGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNLTNFLVTKHTS  301 (358)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (358)
                      +|+..    ++.+..+.+.+..+++.++..+....+|.......    .++...+.+++..+++-+..+...-..++..+
T Consensus       187 ~E~~v----~~~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~----~w~~~~~~~~v~~~~~lf~~y~l~p~~l~~ss  258 (334)
T PF06027_consen  187 EEKLV----KKAPRVEFLGMLGLFGFIISGIQLAILERSGIESI----HWTSQVIGLLVGYALCLFLFYSLVPIVLRMSS  258 (334)
T ss_pred             HHHhc----ccCCHHHHHHHHHHHHHHHHHHHHHheehhhhhcc----CCChhhHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence            99997    34578899999999999998888887776554322    23445556666666666666666667899999


Q ss_pred             hhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhhhcccc
Q 018307          302 ALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKRS  353 (358)
Q Consensus       302 ~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~~~~~~  353 (358)
                      |+..++-....++.+++++++++|+++++..++|.++++.|+++|+..++++
T Consensus       259 At~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~  310 (334)
T PF06027_consen  259 ATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPE  310 (334)
T ss_pred             cceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCcc
Confidence            9999998888999999999999999999999999999999999998765543

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.96  E-value=7.6e-27  Score=210.46  Aligned_cols=271  Identities=14%  Similarity=0.068  Sum_probs=200.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHH
Q 018307           53 PHIFTALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALSAI  132 (358)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (358)
                      ..+.....+++|...+..    .|...++  +| |..+.++|+..+.+++.++..    +++   .++..++..+..++.
T Consensus         5 ~~l~~l~a~~~Wg~~~~~----~k~~~~~--~~-P~~~~~~R~~~a~l~l~~~~~----~~~---~~~~~~~~~~~~~l~   70 (295)
T PRK11689          5 ATLIGLIAILLWSTMVGL----IRGVSES--LG-PVGGAAMIYSVSGLLLLLTVG----FPR---LRQFPKRYLLAGGLL   70 (295)
T ss_pred             hhHHHHHHHHHHHHHHHH----HHHHHcc--CC-hHHHHHHHHHHHHHHHHHHcc----ccc---cccccHHHHHHHhHH
Confidence            566777888888877555    5988887  77 999999999999888775431    111   112223344455555


Q ss_pred             HHHHHhhhhcccc----ccchhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhccccc----------
Q 018307          133 FSFSVVCGNTSLR----YLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNSEP----------  198 (358)
Q Consensus       133 ~~~~~~~~~~al~----~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~~----------  198 (358)
                      +..+..+.+.+++    +.+++.+.++.++.|+++.+++++++|||++++++++++++++|++++..++.          
T Consensus        71 ~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~  150 (295)
T PRK11689         71 FVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINN  150 (295)
T ss_pred             HHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhc
Confidence            5666777776665    46788889999999999999999999999999999999999999998875432          


Q ss_pred             -cchHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHhhhccchHHHH
Q 018307          199 -LFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLF  277 (358)
Q Consensus       199 -~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (358)
                       ..+..|++++++++++||.|.++.||..    ++.++.....   ..+.+.+.+.... ++...      ...+...|.
T Consensus       151 ~~~~~~G~~~~l~aa~~~A~~~v~~k~~~----~~~~~~~~~~---~~~~~~l~~~~~~-~~~~~------~~~~~~~~~  216 (295)
T PRK11689        151 IASNPLSYGLAFIGAFIWAAYCNVTRKYA----RGKNGITLFF---ILTALALWIKYFL-SPQPA------MVFSLPAII  216 (295)
T ss_pred             cccChHHHHHHHHHHHHHHHHHHHHhhcc----CCCCchhHHH---HHHHHHHHHHHHH-hcCcc------ccCCHHHHH
Confidence             1234699999999999999999999974    3445554322   2233333333222 22111      112233444


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhhhcc
Q 018307          278 LLLGNATVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKK  351 (358)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~~~~  351 (358)
                      .++..++.....+..+++++++.++...+++.+++|+++++++++++||+++..+++|.++++.|+++....++
T Consensus       217 ~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~~  290 (295)
T PRK11689        217 KLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLATR  290 (295)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhHh
Confidence            44455555666677889999999999999999999999999999999999999999999999999987765443

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.96  E-value=5.6e-28  Score=205.31  Aligned_cols=295  Identities=19%  Similarity=0.360  Sum_probs=256.8

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhhccc---ccccccHHHHHHHHH
Q 018307           52 SPHIFTALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVP---IQHILSRKQFLKIFA  128 (358)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~  128 (358)
                      ..+...+.++.+|++++++.++++|+.-.+  |++|++++.+|.++-........+..+...   +....+++..++..|
T Consensus        12 ~~rV~~L~lVl~yY~~Si~Ltf~~~~~~~~--f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aP   89 (349)
T KOG1443|consen   12 MNRVLTLALVLLYYFLSIGLTFYFKWLTKN--FHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAP   89 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhhcC--cCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhh
Confidence            456777778899999999999999888876  888999999999988877766655433222   234557888899999


Q ss_pred             HHHHHHHHHhhhhccccccchhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhccccccchHHHHHHH
Q 018307          129 LSAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNSEPLFHLFGFLVC  208 (358)
Q Consensus       129 ~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~~~~  208 (358)
                      .++..++...+.|++++|++.+.+++.|+++++|+.+++.++.-||+++.-...+.++..|+.+.+..+.+++..|..++
T Consensus        90 talata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv  169 (349)
T KOG1443|consen   90 TALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLV  169 (349)
T ss_pred             hhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhhcccC-CCCCHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHh---hhcc--chHHHHHHHHH
Q 018307          209 VGSTAGRALKSVVQGILLTSEA-EKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIE---KASE--DRFVLFLLLGN  282 (358)
Q Consensus       209 l~a~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~~  282 (358)
                      .+++++.++++.+.|.++++.+ .+-+|...+....+...+.++|..+.+||+....+..   ....  .......+...
T Consensus       170 ~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l~  249 (349)
T KOG1443|consen  170 LAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISLG  249 (349)
T ss_pred             HHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHHH
Confidence            9999999999999999997544 5568999999999999999999999999877542222   1111  23455667788


Q ss_pred             HHHHHHHHHHHHHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhh
Q 018307          283 ATVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSE  348 (358)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~  348 (358)
                      +..+++.-.+-+..+.+++..+.++.+..+.+.+.+++.++.+|+++..+|+|..+...|+..|..
T Consensus       250 g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~  315 (349)
T KOG1443|consen  250 GLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHRN  315 (349)
T ss_pred             HHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhcc
Confidence            888998888899999999999999999999999999999999999999999999999999999943

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.96  E-value=6e-26  Score=205.10  Aligned_cols=280  Identities=13%  Similarity=0.192  Sum_probs=200.9

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHH
Q 018307           53 PHIFTALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALSAI  132 (358)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (358)
                      +.+..++..++|...+..    .|...++  ++ |..+.++|+.++++++.++..  +  ++.      .++..+..++.
T Consensus         5 ~~l~~l~~~~~Wg~~~~~----~k~~~~~--~~-p~~~~~~R~~~a~~~l~~~~~--~--~~~------~~~~~~~~g~~   67 (299)
T PRK11453          5 DGVLALLVVVVWGLNFVV----IKVGLHN--MP-PLMLAGLRFMLVAFPAIFFVA--R--PKV------PLNLLLGYGLT   67 (299)
T ss_pred             HHHHHHHHHHHHhhhHHH----HHHHHhc--CC-HHHHHHHHHHHHHHHHHHHhc--C--CCC------chHHHHHHHHH
Confidence            445567777777777555    5888876  77 999999999988766554432  1  111      12233344443


Q ss_pred             H-HHHHhhhhccccc-cchhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhcccc---ccchHHHHHH
Q 018307          133 F-SFSVVCGNTSLRY-LPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNSE---PLFHLFGFLV  207 (358)
Q Consensus       133 ~-~~~~~~~~~al~~-~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~---~~~~~~G~~~  207 (358)
                      . .....+.+.++++ .|++.+.++.++.|+++.+++++++|||++++++++++++++|+.++..++   .+.+..|+.+
T Consensus        68 ~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l  147 (299)
T PRK11453         68 ISFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFML  147 (299)
T ss_pred             HHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHH
Confidence            3 3445566778887 689999999999999999999999999999999999999999999887432   2234579999


Q ss_pred             HHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHhhhccchHHHHHHHHHHHHHH
Q 018307          208 CVGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAY  287 (358)
Q Consensus       208 ~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (358)
                      +++++++|+.+.++.|+..+ +....+......++...+.+.........+++.... ......+...|..++..++.+.
T Consensus       148 ~l~aal~~a~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~i~~t  225 (299)
T PRK11453        148 TLAAAFSWACGNIFNKKIMS-HSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMI-HSLVTIDMTTILSLMYLAFVAT  225 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHhc-ccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhh-hhhccCCHHHHHHHHHHHHHHH
Confidence            99999999999999999752 112223334455555555544444444444332110 1111223344555555555444


Q ss_pred             -HHHHHHHHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhhhcc
Q 018307          288 -LVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKK  351 (358)
Q Consensus       288 -~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~~~~  351 (358)
                       ..+..++..+++.++.+.++..+++|+++.+++++++||+++..+++|.++++.|+++..+.++
T Consensus       226 ~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~  290 (299)
T PRK11453        226 IVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR  290 (299)
T ss_pred             HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence             3445577889999999999999999999999999999999999999999999999998776654

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.95  E-value=1.1e-25  Score=203.03  Aligned_cols=276  Identities=9%  Similarity=0.089  Sum_probs=193.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhhcccc-c-ccccHHHHHHHHHHH
Q 018307           53 PHIFTALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPI-Q-HILSRKQFLKIFALS  130 (358)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~  130 (358)
                      ..+..++..++|...    ....|.. .+  .+ |..++++|+.++.+++.++....++.+. + +..+++.+...+..+
T Consensus         9 g~~~~l~a~~~wg~~----~~~~k~~-~~--~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (296)
T PRK15430          9 GVLLALAAYFIWGIA----PAYFKLI-YY--VP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSA   80 (296)
T ss_pred             HHHHHHHHHHHHHHH----HHHHHHh-cC--CC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHHH
Confidence            344444555555444    5556875 34  66 9999999999998877666543222111 0 011223333334555


Q ss_pred             HHHHHHHhhhhccccccchhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhccccccchHHHHHHHHH
Q 018307          131 AIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNSEPLFHLFGFLVCVG  210 (358)
Q Consensus       131 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~~~~l~  210 (358)
                      +....++.+.+++++++|++.++++.++.|+++.+++++++|||+++++|.+++++++|++++..++.+.    ..++++
T Consensus        81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~----~~~~l~  156 (296)
T PRK15430         81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSL----PIIALG  156 (296)
T ss_pred             HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCc----cHHHHH
Confidence            6677889999999999999999999999999999999999999999999999999999999886433222    246888


Q ss_pred             HHHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHhhhccchHHHHHHHHHHHHHHHHH
Q 018307          211 STAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVN  290 (358)
Q Consensus       211 a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (358)
                      ++++||.|.+..|+..  ++...+......+....+.+...+..   +.+ ..   .........+..++..++.+...+
T Consensus       157 aa~~~a~~~i~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~---~~~~~~~~~~~~~~~~g~~t~i~~  227 (296)
T PRK15430        157 LAFSFAFYGLVRKKIA--VEAQTGMLIETMWLLPVAAIYLFAIA---DSS-TS---HMGQNPMSLNLLLIAAGIVTTVPL  227 (296)
T ss_pred             HHHHHHHHHHHHHhcC--CCCchhHHHHHHHHHHHHHHHHHHHc---cCC-cc---cccCCcHHHHHHHHHHHHHHHHHH
Confidence            9999999999998863  11222333334444444443322211   111 00   000111122344444455555667


Q ss_pred             HHHHHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhhh
Q 018307          291 LTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEA  349 (358)
Q Consensus       291 ~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~~  349 (358)
                      .+++.++++.++..++.+.+++|+++.++|++++||++++.+++|+++++.|+.+....
T Consensus       228 ~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~  286 (296)
T PRK15430        228 LCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMD  286 (296)
T ss_pred             HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            78899999999999999999999999999999999999999999999998888877654

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.95  E-value=7e-25  Score=197.50  Aligned_cols=271  Identities=16%  Similarity=0.141  Sum_probs=199.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHH
Q 018307           53 PHIFTALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALSAI  132 (358)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (358)
                      .....++.+++|.    ......|+..++  ++ |..+.++|++++.+++.++.. .+ ++  + .++++++..+..+++
T Consensus        13 ~~~~~~la~~~~~----~~~~~~K~~~~~--~~-~~~~~~~R~~~a~l~l~~~~~-~~-~~--~-~~~~~~~~~~~~g~~   80 (293)
T PRK10532         13 PILLLLIAMASIQ----SGASLAKSLFPL--VG-APGVTALRLALGTLILIAIFK-PW-RL--R-FAKEQRLPLLFYGVS   80 (293)
T ss_pred             HHHHHHHHHHHHH----hhHHHHHHHHHH--cC-HHHHHHHHHHHHHHHHHHHHh-HH-hc--c-CCHHHHHHHHHHHHH
Confidence            4444555555554    445568999987  66 999999999999888876643 11 11  1 235566677778888


Q ss_pred             HHHHHhhhhccccccchhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhccc---cccchHHHHHHHH
Q 018307          133 FSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNS---EPLFHLFGFLVCV  209 (358)
Q Consensus       133 ~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~---~~~~~~~G~~~~l  209 (358)
                      ....+.+.+++++++|++.++++..+.|+++.+++    +|++.+  +.++.++++|+.++...   ..+.+..|+++++
T Consensus        81 ~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~--~~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l  154 (293)
T PRK10532         81 LGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVD--FVWVVLAVLGLWFLLPLGQDVSHVDLTGAALAL  154 (293)
T ss_pred             HHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHH--HHHHHHHHHHHheeeecCCCcccCChHHHHHHH
Confidence            88888889999999999999999999999998876    355554  45567778999876522   2233567999999


Q ss_pred             HHHHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHhhhccchHHHHHHHHHHHH-HHH
Q 018307          210 GSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATV-AYL  288 (358)
Q Consensus       210 ~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  288 (358)
                      +++++||.|.+..|+..    ++.++... .++..++++++.|+....++..        ..+...+...+..++. ...
T Consensus       155 ~aa~~~a~~~v~~r~~~----~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~--------~~~~~~~~~~l~lgv~~t~~  221 (293)
T PRK10532        155 GAGACWAIYILSGQRAG----AEHGPATV-AIGSLIAALIFVPIGALQAGEA--------LWHWSILPLGLAVAILSTAL  221 (293)
T ss_pred             HHHHHHHHHHHHHHHHh----ccCCchHH-HHHHHHHHHHHHHHHHHccCcc--------cCCHHHHHHHHHHHHHHHHH
Confidence            99999999999999985    34455554 4566777777777665432210        0122223333333443 334


Q ss_pred             HHHHHHHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhhhccccc
Q 018307          289 VNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKRSK  354 (358)
Q Consensus       289 ~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~~~~~~~  354 (358)
                      .+..+++++++.++.+++++.+++|+++.++|++++||++++.+++|.++++.|.+.+++..+||.
T Consensus       222 ~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~~~  287 (293)
T PRK10532        222 PYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRREP  287 (293)
T ss_pred             HHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence            445678899999999999999999999999999999999999999999999999999987665543

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.95  E-value=9e-25  Score=193.92  Aligned_cols=252  Identities=18%  Similarity=0.170  Sum_probs=196.3

Q ss_pred             HHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHH-HHHHHHHhhhhccccccchh
Q 018307           72 LLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALS-AIFSFSVVCGNTSLRYLPVS  150 (358)
Q Consensus        72 ~~~~K~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~al~~~~~~  150 (358)
                      .+..|+.+++ +.| |..+.+.|++.+.+++.+... .+       +++++++..+..+ +...++..+.++|++++|++
T Consensus         5 ~~~~k~~~~~-~~~-~~~~~~~r~~~~~l~l~~~~~-~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~   74 (260)
T TIGR00950         5 GVVIGQYLEG-QVP-LYFAVFRRLIFALLLLLPLLR-RR-------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVG   74 (260)
T ss_pred             HHHHHHHHhc-CCC-HHHHHHHHHHHHHHHHHHHHH-hc-------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChh
Confidence            4456998876 345 889999999888777766544 22       1233444444444 55688899999999999999


Q ss_pred             HHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 018307          151 FNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNSE-PLFHLFGFLVCVGSTAGRALKSVVQGILLTSE  229 (358)
Q Consensus       151 ~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~-~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~  229 (358)
                      .++++.++.|+++++++.+++|||++++++.++.++++|+.++..++ .+.+..|+.++++++++|+.+.++.|+..  +
T Consensus        75 ~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~--~  152 (260)
T TIGR00950        75 EAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLV--K  152 (260)
T ss_pred             hhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHh--h
Confidence            99999999999999999999999999999999999999999876443 34567899999999999999999999985  2


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHhhhccchHHHHHHHHHHHH-HHHHHHHHHHHHhccchhHHHHh
Q 018307          230 AEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATV-AYLVNLTNFLVTKHTSALTLQVL  308 (358)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~  308 (358)
                      +.+.++.....+....+.+.+.+.....+.+..        .+...+..++..+++ ....+..+++++++.++.+++.+
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~  224 (260)
T TIGR00950       153 KEGPELLQFTGWVLLLGALLLLPFAWFLGPNPQ--------ALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASIL  224 (260)
T ss_pred             cCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCC--------cchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHH
Confidence            233334455556778888887777665432211        123344444444444 34555668889999999999999


Q ss_pred             hhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHH
Q 018307          309 GNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGV  343 (358)
Q Consensus       309 ~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~  343 (358)
                      .+++|+++.+++++++||++++.+++|.++++.|+
T Consensus       225 ~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       225 ALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999886

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.94  E-value=1.2e-27  Score=199.89  Aligned_cols=300  Identities=19%  Similarity=0.235  Sum_probs=253.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhh--cCCCchHHHHHHHHHHHHHHHHHHHHHhhcc----ccccc-ccHHHHHHH
Q 018307           54 HIFTALIIASWYLSNIGVLLLNKYLLSF--YGYRYPIFLTMLHMISCAVYSYVAIHFLELV----PIQHI-LSRKQFLKI  126 (358)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~~~~~K~~~~~--~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~----~~~~~-~~~~~~~~~  126 (358)
                      ..+.......+...++.+.+.||++++.  ...+.|.++++.|.++...++..+-......    ..+.. .+-+..+++
T Consensus        26 ~~~v~~~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~v  105 (347)
T KOG1442|consen   26 AKQVDSAVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQV  105 (347)
T ss_pred             hhchhhhccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhh
Confidence            4445555666778889999999999986  3467799999999999888877665432221    11111 356677889


Q ss_pred             HHHHHHHHHHHhhhhccccccchhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhcccc---ccchHH
Q 018307          127 FALSAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNSE---PLFHLF  203 (358)
Q Consensus       127 ~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~---~~~~~~  203 (358)
                      +++++.+.++..+.|++++|++++++++-++.+.+|+.+++++++|+|-+..-..++.++++|..+-+..|   ...++.
T Consensus       106 lplsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~ls~~  185 (347)
T KOG1442|consen  106 LPLSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTLSWI  185 (347)
T ss_pred             cchhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccCccchh
Confidence            99999999999999999999999999999999999999999999999999999999999999999888766   466789


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHhhhccchHHHHHHHHHH
Q 018307          204 GFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNA  283 (358)
Q Consensus       204 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (358)
                      |.++++.++++-|+..++.||..  .+.+-.-+.+..|+++.+.++.+|...+.+. ...-+..+..+...+|.++.++|
T Consensus       186 GvifGVlaSl~vAlnaiytkk~l--~~v~~~iw~lt~ynnv~a~lLflpll~lnge-~~~v~~~~~l~a~~Fw~~mtLsg  262 (347)
T KOG1442|consen  186 GVIFGVLASLAVALNAIYTKKVL--PPVGDCIWRLTAYNNVNALLLFLPLLILNGE-FQAVVGFPHLPAIKFWILMTLSG  262 (347)
T ss_pred             hhHHHHHHHHHHHHHHHhhheec--ccccCeehhhHHHHHHHHHHHHHHHHHHcch-HHHHcCcccchHHHHHHHHHHHH
Confidence            99999999999999999999887  3344457899999999999999998776533 22222223445678899999999


Q ss_pred             HHHHHHHHHHHHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhhhccccccc
Q 018307          284 TVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKRSKVT  356 (358)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~~~~~~~~~  356 (358)
                      +++|..++...+-+|.+||++..+-++.|.....++++.+++|..+..-|-|-+++++|...|++.|++++++
T Consensus       263 lfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~  335 (347)
T KOG1442|consen  263 LFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRK  335 (347)
T ss_pred             HHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999999999999999999999999999988776543

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.93  E-value=1.3e-24  Score=176.46  Aligned_cols=288  Identities=18%  Similarity=0.245  Sum_probs=246.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHh
Q 018307           59 LIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALSAIFSFSVV  138 (358)
Q Consensus        59 ~~~~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (358)
                      ...+.++++++.+++.||++++..+|+--+.+.+.|.+++.+-+.+..+ .|..+.    +....+.+++.+++...+.+
T Consensus         9 ~~~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~-l~~~~f----R~t~aK~WfpiSfLLv~MIy   83 (309)
T COG5070           9 TASLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKF-LRLVEF----RLTKAKKWFPISFLLVVMIY   83 (309)
T ss_pred             hHHHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHH-HhHhhe----ehhhhhhhcCHHHHHHHHHH
Confidence            4557889999999999999999989988889999999988777665544 343332    24566888999999999999


Q ss_pred             hhhccccccchhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhccccccch-------HHHHHHHHHH
Q 018307          139 CGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNSEPLFH-------LFGFLVCVGS  211 (358)
Q Consensus       139 ~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~~~~~-------~~G~~~~l~a  211 (358)
                      ....+++|++++.+++++.++.+.++..+..++|.|.+..+..+.+++++.-+....+|.+..       ..|++|....
T Consensus        84 t~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN~GY~Wm~~N  163 (309)
T COG5070          84 TSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILNPGYLWMFTN  163 (309)
T ss_pred             hcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccCCceEEEehh
Confidence            999999999999999999999999999999999999999999999999999999988876322       2499999999


Q ss_pred             HHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHhhhccchHHHHHHHHHHHHHHHHHH
Q 018307          212 TAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNL  291 (358)
Q Consensus       212 ~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (358)
                      .+..+.+-...|+..  +-.+......++|.++.+..+++.+...+|+++.........  .-.......+++++++..+
T Consensus       164 clssaafVL~mrkri--~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~--~d~l~am~ISgl~svgiSy  239 (309)
T COG5070         164 CLSSAAFVLIMRKRI--KLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLS--VDSLMAMFISGLCSVGISY  239 (309)
T ss_pred             hHhHHHHHHHHHHhh--cccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCC--hHHHHHHHHHHHHHhhhhh
Confidence            999999988888876  445566788999999999999999999988876554333222  2235567889999999999


Q ss_pred             HHHHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhhhcccccc
Q 018307          292 TNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKRSKV  355 (358)
Q Consensus       292 ~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~~~~~~~~  355 (358)
                      +..|+++.++.++.++++.++.....+.|.++|||+.+...+..+.+-..+..+|.+.|+++++
T Consensus       240 ~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~q  303 (309)
T COG5070         240 CSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQQ  303 (309)
T ss_pred             ccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999999999999999999988776544

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.92  E-value=6.4e-23  Score=174.84  Aligned_cols=293  Identities=17%  Similarity=0.236  Sum_probs=241.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhh-c-----CCCchHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHH
Q 018307           53 PHIFTALIIASWYLSNIGVLLLNKYLLSF-Y-----GYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKI  126 (358)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~~~~K~~~~~-~-----~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  126 (358)
                      +....+..+..-+...+...++.+-+.++ |     .|.+|.++.+.|-+++.++........   +++ ...++.++..
T Consensus        11 ~~~~L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~---k~~-~~~~apl~~y   86 (327)
T KOG1581|consen   11 KIILLVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKWW---KKE-LSGVAPLYKY   86 (327)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhcc---ccc-CCCCCchhHH
Confidence            44555555555556666666666555543 2     477799999999999998886655422   222 3456778888


Q ss_pred             HHHHHHHHHHHhhhhccccccchhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhccccc--------
Q 018307          127 FALSAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNSEP--------  198 (358)
Q Consensus       127 ~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~~--------  198 (358)
                      ...++.+.++..|++.|++|++-++..+.|++..+.++++..++.|+|++..+++...++.+|+.+....+.        
T Consensus        87 ~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g  166 (327)
T KOG1581|consen   87 SLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSG  166 (327)
T ss_pred             hHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccC
Confidence            888999999999999999999999999999999999999999999999999999999999999998873321        


Q ss_pred             -cchHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHhhhccchHHHH
Q 018307          199 -LFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLF  277 (358)
Q Consensus       199 -~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (358)
                       +++++|+.+...+.++.++.+..++++.  +..+++++.++++.|+++++......+. .+ ...+........+..+.
T Consensus       167 ~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf--~~~k~s~~~mM~~vNLf~~i~~~~~li~-qg-~~~~av~F~~~hp~~~~  242 (327)
T KOG1581|consen  167 RENSPIGILLLFGYLLFDGFTNATQDSLF--KKYKVSSLHMMFGVNLFSAILNGTYLIL-QG-HLLPAVSFIKEHPDVAF  242 (327)
T ss_pred             CCCchHhHHHHHHHHHHHhhHHhHHHHHh--ccCCccHhHHHHHHHHHHHHHHHHhhhc-CC-CCchHHHHHHcChhHHH
Confidence             2458999999999999999999999999  6789999999999999999887766332 22 22233334445667778


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhhhcccc
Q 018307          278 LLLGNATVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKRS  353 (358)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~~~~~~  353 (358)
                      -++..++++.+.+...+..+++.|+.+...+++.|.++++.++.+.||++++..||+|..++++|+.+-...|+|+
T Consensus       243 Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~~  318 (327)
T KOG1581|consen  243 DILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKKK  318 (327)
T ss_pred             HHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHhc
Confidence            8888899999999999999999999999999999999999999999999999999999999999999877766653

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.92  E-value=2.5e-22  Score=180.01  Aligned_cols=268  Identities=13%  Similarity=0.078  Sum_probs=184.0

Q ss_pred             HHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHhhhhcccc
Q 018307           66 LSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALSAIFSFSVVCGNTSLR  145 (358)
Q Consensus        66 ~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~  145 (358)
                      +........+|...++  -+ +  ..+++.....+++.++......++..+..+++.+...+..++....++.+.+.+++
T Consensus        11 ~~~a~~~~~~k~~~~~--~~-~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~   85 (281)
T TIGR03340        11 LMHAGWNLMAKSHADK--EP-D--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLGLAQAYH   85 (281)
T ss_pred             HHHHHHHHHHhhcCCc--hh-H--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence            3444446667866554  11 3  24666666666665555422111211223344555556666777888999999999


Q ss_pred             ccchhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhccccc-cchHHHHHHHHHHHHHHHHHHHHHHH
Q 018307          146 YLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNSEP-LFHLFGFLVCVGSTAGRALKSVVQGI  224 (358)
Q Consensus       146 ~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~~-~~~~~G~~~~l~a~~~~a~~~v~~~~  224 (358)
                      +.|++..+.+.++.|+++.+++++++|||+++++|+|+.+++.|+.++..++. ..+..|+.++++++++|+.|.+..|+
T Consensus        86 ~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~~~i~~k~  165 (281)
T TIGR03340        86 HADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAIYSLSDKA  165 (281)
T ss_pred             cCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHhhhhccc
Confidence            99999999999999999999999999999999999999999999998764432 34456888999999999999998887


Q ss_pred             hhcccCCCCCHHHHHHHHHHHHHHHH-HHHHHHhcchhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHHHHHhccchh
Q 018307          225 LLTSEAEKLHSMNLLLYMAPMSALIL-LPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNLTNFLVTKHTSAL  303 (358)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (358)
                      ..    ++.++..........+.+.. .|............   ........+..+..+++.....+..++.++++.++.
T Consensus       166 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a~  238 (281)
T TIGR03340       166 AA----LGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRS---MFPYARQILPSATLGGLMIGGAYALVLWAMTRLPVA  238 (281)
T ss_pred             cc----cchhcccccHHHHHHHHHHHHHHHHHHHHHHhccc---hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCce
Confidence            53    22222211111111222221 22222110000000   001122334445555666666667788999999999


Q ss_pred             HHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHH
Q 018307          304 TLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVL  345 (358)
Q Consensus       304 ~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~  345 (358)
                      ..+...+++|+++.++|++++||+++..+++|.++++.|+.+
T Consensus       239 ~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       239 TVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             EEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            999999999999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.91  E-value=2.3e-23  Score=170.72  Aligned_cols=261  Identities=19%  Similarity=0.240  Sum_probs=215.8

Q ss_pred             CCchHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHhhhhccccccchhHHHHHhhhHHHHH
Q 018307           84 YRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALSAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFT  163 (358)
Q Consensus        84 ~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~  163 (358)
                      |.+...++++|.....+..-++..+++..+.    ++..-+.....++.+.+.++..|.+++|+|.++..+-+++.|+.+
T Consensus        50 FTfalaLVf~qC~~N~vfAkvl~~ir~~~~~----D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPV  125 (337)
T KOG1580|consen   50 FTFALALVFFQCTANTVFAKVLFLIRKKTEI----DNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPV  125 (337)
T ss_pred             ehHHHHHHHHHHHHHHHHHHhheeecccccc----cCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcce
Confidence            6678889999998888777665543332222    223335567788999999999999999999999999999999999


Q ss_pred             HHHHHHHhccccchHHHHHHHHHHHhhhhhccccc-------cchHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCHH
Q 018307          164 AIFAFLITCKKESAEVYCALMPVVFGIVLASNSEP-------LFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSM  236 (358)
Q Consensus       164 ~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~~-------~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~  236 (358)
                      ++++.++.+++++|+++.++..++.|+++....+.       +....|-++.+++....++....++|+.  +.++-+..
T Consensus       126 MilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrir--a~yq~~g~  203 (337)
T KOG1580|consen  126 MILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIR--ASYQRTGT  203 (337)
T ss_pred             eeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHH--HhhccCch
Confidence            99999999999999999999999999999986532       3345799999999999999999999996  55667788


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcchhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHhhhhhHHHH
Q 018307          237 NLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVA  316 (358)
Q Consensus       237 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~  316 (358)
                      .++.+.++++.+.+....++. ++.+ ++.......+..|+-+...++++.+.+.+.|..+...+|.+-|++++.+..++
T Consensus       204 ~MM~~~NlwStL~Lg~g~lfT-GElw-eF~yF~~RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFT  281 (337)
T KOG1580|consen  204 SMMFYTNLWSTLYLGAGLLFT-GELW-EFFYFVQRHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFT  281 (337)
T ss_pred             hhHHHHHHHHHHHhhhhheeh-hhHH-HHHHHHHhccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHH
Confidence            899999999998887665543 3322 22223334556677777888888888999999999999999999999999999


Q ss_pred             HHhhHhhcCCcccchhhhhHHHHHHHHHHhhhhccc
Q 018307          317 AVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKR  352 (358)
Q Consensus       317 ~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~~~~~  352 (358)
                      ++.++++|+++++.+||+|.++++.|...-....++
T Consensus       282 il~SVllf~npls~rQwlgtvlVF~aL~~D~~~GK~  317 (337)
T KOG1580|consen  282 ILISVLLFNNPLSGRQWLGTVLVFSALTADVVDGKK  317 (337)
T ss_pred             HHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcCCc
Confidence            999999999999999999999999998877655443

>TIGR00688 rarD rarD protein

Probab=99.89  E-value=3.3e-20  Score=164.16  Aligned_cols=248  Identities=9%  Similarity=0.004  Sum_probs=169.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhhccc----c-cccccHHHHHHHH
Q 018307           53 PHIFTALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVP----I-QHILSRKQFLKIF  127 (358)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~----~-~~~~~~~~~~~~~  127 (358)
                      .....++..++|...    ..+.|. ..+  .+ |..++++|++++.+++.++....++++    + ++..+++.+....
T Consensus         3 g~~~~i~a~~~wg~~----~~~~k~-~~~--~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (256)
T TIGR00688         3 GIIVSLLASFLFGYM----YYYSKL-LKP--LP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLL   74 (256)
T ss_pred             cHHHHHHHHHHHHHH----HHHHHH-hcc--CC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHH
Confidence            345555566666655    455687 444  66 999999999999888766554232211    0 0111222234456


Q ss_pred             HHHHHHHHHHhhhhccccccchhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhccccccchHHHHHH
Q 018307          128 ALSAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNSEPLFHLFGFLV  207 (358)
Q Consensus       128 ~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~~~  207 (358)
                      ..+++...+..+.++++++++++.++++.++.|+++++++++++|||+++++|++++++++|++++..++.+.+    .+
T Consensus        75 ~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~----~~  150 (256)
T TIGR00688        75 LCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP----WE  150 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch----HH
Confidence            67777888999999999999999999999999999999999999999999999999999999998764332222    35


Q ss_pred             HHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHhhhccchHHHHHHHHHHHHHH
Q 018307          208 CVGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAY  287 (358)
Q Consensus       208 ~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (358)
                      +++++++|+.|.+..|+..   ++  +..+.... .........+.....+.+..     ........|..++..++.+.
T Consensus       151 ~l~aa~~~a~~~i~~~~~~---~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~g~~t~  219 (256)
T TIGR00688       151 ALVLAFSFTAYGLIRKALK---NT--DLAGFCLE-TLSLMPVAIYYLLQTDFATV-----QQTNPFPIWLLLVLAGLITG  219 (256)
T ss_pred             HHHHHHHHHHHHHHHhhcC---CC--CcchHHHH-HHHHHHHHHHHHHHhccCcc-----cccCchhHHHHHHHHHHHHH
Confidence            7889999999999999873   22  22222211 11111111111111111100     00011124555556666666


Q ss_pred             HHHHHHHHHHhccchhHHHHhhhhhHHHHHHhhHhh
Q 018307          288 LVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLI  323 (358)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~  323 (358)
                      ..+..++.++++.++..++++.+++|+++.+++.+.
T Consensus       220 i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       220 TPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            777888999999999999999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.88  E-value=3e-21  Score=168.97  Aligned_cols=297  Identities=15%  Similarity=0.176  Sum_probs=229.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHH------HHh-hcccc-----------
Q 018307           53 PHIFTALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAI------HFL-ELVPI-----------  114 (358)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~------~~~-~~~~~-----------  114 (358)
                      ++...+++..+.-..++..+.+++.+++++.++.|++.++.....-.+.+.++.      +.. ++.++           
T Consensus        11 r~~lGl~lL~~V~viWV~SSeLT~~if~~~~f~kPFfiTY~~ts~fivYL~~~~~~d~~~~~~~~R~~~~~~~~~~e~d~   90 (416)
T KOG2765|consen   11 RWTLGLVLLLLVVVIWVASSELTQSIFEDYNFRKPFFITYLKTSLFIVYLPPFILIDAPWRILETRSKRSNHAIMEEADA   90 (416)
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHhhcccCCceeEeeecccceehhhhhhhhhcchhhhhhhhccccchhhhhhhhh
Confidence            345555555555566667788899999998888899998887654444443322      100 11000           


Q ss_pred             ------------------------------------------------cccccH------------HHHHHHHHHHHHHH
Q 018307          115 ------------------------------------------------QHILSR------------KQFLKIFALSAIFS  134 (358)
Q Consensus       115 ------------------------------------------------~~~~~~------------~~~~~~~~~~~~~~  134 (358)
                                                                      .+...|            +..+.-+..+.+..
T Consensus        91 e~y~~~~~~~~~~~~~l~~~~~~~~~~~~l~s~~~~~~~s~~~e~~~~~~~~~rs~l~~~~~~t~~~~ak~sl~fc~lWF  170 (416)
T KOG2765|consen   91 EGYFSACTTDKTMESGLSGPESVPDKSPLLGSGEEEKPESTNLEVREKANTKKRSNLKERGKLTATQTAKLSLFFCPLWF  170 (416)
T ss_pred             hccccccccccccccccCCceeeeccccccccccccCCCCccccccccCCcccccchhhhhhhHHHHHHHHHHHHHHHHH
Confidence                                                            001111            33444556666778


Q ss_pred             HHHhhhhccccccchhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhccccc--------cchHHHHH
Q 018307          135 FSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNSEP--------LFHLFGFL  206 (358)
Q Consensus       135 ~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~~--------~~~~~G~~  206 (358)
                      +.+...|.|+.+++++..+++.+++-+||..++.++.+||+++.|.+++.+.+.|++++..++.        +....|.+
T Consensus       171 ~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~~~llG~l  250 (416)
T KOG2765|consen  171 LANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPASRPLLGNL  250 (416)
T ss_pred             HHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCCccchhHHHH
Confidence            8999999999999999999999999999999999999999999999999999999999986633        23478999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHhhhccchHHHHHHHHHHHHH
Q 018307          207 VCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVA  286 (358)
Q Consensus       207 ~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (358)
                      +++++++.||+|.++.||...++..++|......|..++..+++.|...+.+......+  ..........+++.+++..
T Consensus       251 laL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F--~lP~~~q~~~vv~~~ligt  328 (416)
T KOG2765|consen  251 LALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERF--ELPSSTQFSLVVFNNLIGT  328 (416)
T ss_pred             HHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcc--cCCCCceeEeeeHhhHHHH
Confidence            99999999999999999998654468899999999999999999888776654322211  1122333444555566667


Q ss_pred             HHHHHHHHHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhhhcc
Q 018307          287 YLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKK  351 (358)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~~~~  351 (358)
                      ++.-+.+.++.-.++|+++.+..+++.+++++.+.++-|.++++..++|.+.+++|.+..++..+
T Consensus       329 vvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~  393 (416)
T KOG2765|consen  329 VVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE  393 (416)
T ss_pred             HHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence            77788899999999999999999999999999999999999999999999999999999887644

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.87  E-value=7e-19  Score=158.48  Aligned_cols=270  Identities=20%  Similarity=0.197  Sum_probs=192.0

Q ss_pred             HHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHhhhh
Q 018307           62 ASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALSAIFSFSVVCGN  141 (358)
Q Consensus        62 ~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (358)
                      +++...+.......|...+.  ...+......|...+......... .+.... ....++.++..+..++.......+.+
T Consensus        13 l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (292)
T COG0697          13 LLWGLLWGLSFIALKLAVES--LDPFLFAAALRFLIAALLLLPLLL-LEPRGL-RPALRPWLLLLLLALLGLALPFLLLF   88 (292)
T ss_pred             HHHHHHHHHHHHHHHHHhcc--cCChHHHHHHHHHHHHHHHHHHHH-hhcccc-cccccchHHHHHHHHHHHHHHHHHHH
Confidence            33333334434445655554  222566666699888777333333 111111 11122233445566667788899999


Q ss_pred             ccccccchhHHHHHhhhHHHHHHHHHH-HHhccccchHHHHHHHHHHHhhhhhccccccch---HHHHHHHHHHHHHHHH
Q 018307          142 TSLRYLPVSFNQAIGATTPFFTAIFAF-LITCKKESAEVYCALMPVVFGIVLASNSEPLFH---LFGFLVCVGSTAGRAL  217 (358)
Q Consensus       142 ~al~~~~~~~~~~l~~~~p~~~~~~~~-~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~~~~~---~~G~~~~l~a~~~~a~  217 (358)
                      .++++++++.++++.++.|+++.+++. +++|||++++++.++.++++|++++..++...+   ..|..+++++++++++
T Consensus        89 ~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~~~a~  168 (292)
T COG0697          89 LALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLWAL  168 (292)
T ss_pred             HHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999996 777999999999999999999999997665443   5899999999999999


Q ss_pred             HHHHHHHhhcccCCCCCHHHHHH-HHHHHHHHHHHHHHHHhcchhHHHHHhhhccchHHHHHHHHHHHHHH-HHHHHHHH
Q 018307          218 KSVVQGILLTSEAEKLHSMNLLL-YMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAY-LVNLTNFL  295 (358)
Q Consensus       218 ~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  295 (358)
                      +.+..|+..     +.++..... ++..  ...+...........       .......+..+...++.+. ..+..++.
T Consensus       169 ~~~~~~~~~-----~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~~~~i~~~~~~~  234 (292)
T COG0697         169 YTALVKRLS-----RLGPVTLALLLQLL--LALLLLLLFFLSGFG-------APILSRAWLLLLYLGVFSTGLAYLLWYY  234 (292)
T ss_pred             HHHHHHHhc-----CCChHHHHHHHHHH--HHHHHHHHHHhcccc-------ccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999873     445555555 3333  111111111111110       1112334555555555555 45677888


Q ss_pred             HHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhhh
Q 018307          296 VTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEA  349 (358)
Q Consensus       296 ~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~~  349 (358)
                      .+++.++...++..+++|+.+.+++++++||+++..+++|.++++.|+.+....
T Consensus       235 ~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         235 ALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            999999999999999999999999999999999999999999999999998876

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.86  E-value=3.1e-20  Score=155.52  Aligned_cols=290  Identities=16%  Similarity=0.180  Sum_probs=241.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-chHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHH
Q 018307           53 PHIFTALIIASWYLSNIGVLLLNKYLLSFYGYR-YPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALSA  131 (358)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~-~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (358)
                      ++.+.++.+....+.-....+..+++++..+|. +-|.++..|+++-..+.++...  ..+++   ++...||....++.
T Consensus        40 kw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~--~~~~k---~r~iP~rtY~~la~  114 (367)
T KOG1582|consen   40 KWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQ--LIQTK---RRVIPWRTYVILAF  114 (367)
T ss_pred             hhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEE--eeccc---ceecchhHhhhhHh
Confidence            677888888888888888889999999988888 7899999999876555444332  12222   23446677778888


Q ss_pred             HHHHHHhhhhccccccchhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhccccc----cchHHHHHH
Q 018307          132 IFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNSEP----LFHLFGFLV  207 (358)
Q Consensus       132 ~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~~----~~~~~G~~~  207 (358)
                      +....+.+++-++.|++.++-.++++|..+.+++.+.++-++|+.+.++.+..++.+|.+.....|.    .++..|+.+
T Consensus       115 ~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv~m  194 (367)
T KOG1582|consen  115 LTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGVMM  194 (367)
T ss_pred             hhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeHHH
Confidence            8888999999999999999999999999999999999999999999999999999999999986654    567899999


Q ss_pred             HHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHhhhccchHHHHHHHHHHHHHH
Q 018307          208 CVGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAY  287 (358)
Q Consensus       208 ~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (358)
                      .-++.++.|+-...+++.+  +..+-+..++++|...++.++++...... ++....+..-.+++.....+.++-+..++
T Consensus       195 IsgALl~DA~iGNvQEk~m--~~~~~ss~EmvfySy~iG~vflf~~mvlT-ge~f~a~~fcaehp~~tyGy~~~~s~~gy  271 (367)
T KOG1582|consen  195 ISGALLADAVIGNVQEKAM--KMNPASSSEMVFYSYGIGFVFLFAPMVLT-GELFSAWTFCAEHPVRTYGYAFLFSLAGY  271 (367)
T ss_pred             HHHHHHHHHHhhHHHHHHH--hhCCCCcceEEEeeecccHHHHHHHHHhc-ccchhhhHHHHhCcHhHHHHHHHHHHHhH
Confidence            9999999999888888888  55666788999999999999887776654 33444444334445556666666777777


Q ss_pred             HHHHHHHHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhhhc
Q 018307          288 LVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAK  350 (358)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~~~  350 (358)
                      +........++..++.++..+++.+..+++++|.++|..++|....-|..+++.|+++-.+.|
T Consensus       272 lG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk  334 (367)
T KOG1582|consen  272 LGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK  334 (367)
T ss_pred             hhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence            777777788999999999999999999999999999999999999999999999999887776

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.86  E-value=6.2e-19  Score=146.59  Aligned_cols=256  Identities=19%  Similarity=0.155  Sum_probs=204.3

Q ss_pred             HHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHhhhhccccccchhHH
Q 018307           73 LLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALSAIFSFSVVCGNTSLRYLPVSFN  152 (358)
Q Consensus        73 ~~~K~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~  152 (358)
                      -+.|.++-.  ++ |.-.+++|...+.+++..+.+ .++    +...+++++..+..++....++.++|.+++.+|.+++
T Consensus        29 s~Ak~LFP~--vG-~~g~t~lRl~~aaLIll~l~R-Pwr----~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiA  100 (292)
T COG5006          29 SFAKSLFPL--VG-AAGVTALRLAIAALILLALFR-PWR----RRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIA  100 (292)
T ss_pred             HHHHHHccc--cC-hhhHHHHHHHHHHHHHHHHhh-HHH----hccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhh
Confidence            356888876  44 999999999999999888765 322    2256778899999999999999999999999999999


Q ss_pred             HHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhcccc---ccchHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 018307          153 QAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNSE---PLFHLFGFLVCVGSTAGRALKSVVQGILLTSE  229 (358)
Q Consensus       153 ~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~---~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~  229 (358)
                      ..+..+-|+.+.+++.      -+.+..+.+.+.+.|..+.....   .+.|+.|..++++++.||+.|.+..||.-   
T Consensus       101 VAiEF~GPL~vA~~~s------Rr~~d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g---  171 (292)
T COG5006         101 VAIEFTGPLAVALLSS------RRLRDFVWVALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRAG---  171 (292)
T ss_pred             hhhhhccHHHHHHHhc------cchhhHHHHHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchhc---
Confidence            9999999998887662      24456666777788888776332   46688999999999999999999999974   


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHhhhccchHHHHHHHHHHHHHHHHHHH-HHHHHhccchhHHHHh
Q 018307          230 AEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNLT-NFLVTKHTSALTLQVL  308 (358)
Q Consensus       230 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~s~~  308 (358)
                       +..+....+...+.++.++.+|+.....++..        .++.....-+..++++...-++ -...+++.++.++++.
T Consensus       172 -~~~~g~~g~a~gm~vAaviv~Pig~~~ag~~l--------~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~L  242 (292)
T COG5006         172 -RAEHGTAGVAVGMLVAALIVLPIGAAQAGPAL--------FSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTL  242 (292)
T ss_pred             -ccCCCchHHHHHHHHHHHHHhhhhhhhcchhh--------cChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHH
Confidence             35566777888889999999998776544432        2344455555555655544444 5567999999999999


Q ss_pred             hhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhhhccccc
Q 018307          309 GNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKRSK  354 (358)
Q Consensus       309 ~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~~~~~~~  354 (358)
                      ..++|.++.+.|++++||++|..||+|++.++.+..-.+...+|+.
T Consensus       243 lSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~~~  288 (292)
T COG5006         243 LSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARKPA  288 (292)
T ss_pred             HHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCCCC
Confidence            9999999999999999999999999999999999886666554443

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.83  E-value=2.1e-22  Score=168.11  Aligned_cols=276  Identities=15%  Similarity=0.152  Sum_probs=213.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHH
Q 018307           55 IFTALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALSAIFS  134 (358)
Q Consensus        55 ~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (358)
                      ...++..+. ++.+.++.+..|...++     |..+.-.|+++-.++.++.....+ .+.  ...+...+..++.++...
T Consensus        38 ~gl~l~~vs-~ff~~~~vv~t~~~e~~-----p~e~a~~r~l~~mlit~pcliy~~-~~v--~gp~g~R~~LiLRg~mG~  108 (346)
T KOG4510|consen   38 LGLLLLTVS-YFFNSCMVVSTKVLEND-----PMELASFRLLVRMLITYPCLIYYM-QPV--IGPEGKRKWLILRGFMGF  108 (346)
T ss_pred             cCceehhhH-HHHhhHHHhhhhhhccC-----hhHhhhhhhhhehhhhheEEEEEe-eee--ecCCCcEEEEEeehhhhh
Confidence            333444444 66777777777776655     899999997776666665543221 111  011122244567788888


Q ss_pred             HHHhhhhccccccchhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhccc-----cc---------cc
Q 018307          135 FSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNS-----EP---------LF  200 (358)
Q Consensus       135 ~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~-----~~---------~~  200 (358)
                      .+..+.+|+++|++.+.+.++..++|+|+.++++.++||+++..+.++..+.+.||++++.+     +.         +.
T Consensus       109 tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~  188 (346)
T KOG4510|consen  109 TGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEY  188 (346)
T ss_pred             hHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccc
Confidence            89999999999999999999999999999999999999999999999999999999999732     11         22


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHhhhccchHHHHHHH
Q 018307          201 HLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLL  280 (358)
Q Consensus       201 ~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (358)
                      +..|...++.++++-|--.++.|++-    ++.|....+.|..+++.+..++.....+..       ...+....|++++
T Consensus       189 ~~~gt~aai~s~lf~asvyIilR~iG----k~~h~~msvsyf~~i~lV~s~I~~~~ig~~-------~lP~cgkdr~l~~  257 (346)
T KOG4510|consen  189 DIPGTVAAISSVLFGASVYIILRYIG----KNAHAIMSVSYFSLITLVVSLIGCASIGAV-------QLPHCGKDRWLFV  257 (346)
T ss_pred             cCCchHHHHHhHhhhhhHHHHHHHhh----ccccEEEEehHHHHHHHHHHHHHHhhccce-------ecCccccceEEEE
Confidence            35688888999988888888888874    566777777788888877766655444322       1223455677888


Q ss_pred             HHHHHHHHHHHHHHHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhhhc
Q 018307          281 GNATVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAK  350 (358)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~~~  350 (358)
                      ..|+.++..+....+.+++-.+...++..+...+++.++.+++|||.++++.|.|+++++.+.......|
T Consensus       258 ~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~k  327 (346)
T KOG4510|consen  258 NLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKK  327 (346)
T ss_pred             EehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHH
Confidence            8899999999999999999999999999999999999999999999999999999999988877665443

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.83  E-value=4.9e-19  Score=153.66  Aligned_cols=215  Identities=22%  Similarity=0.233  Sum_probs=176.3

Q ss_pred             cHHHHHHHHHHHHHHHHHHhhhhccccccchhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhccccc
Q 018307          119 SRKQFLKIFALSAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNSEP  198 (358)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~~  198 (358)
                      .+++..+..++++++.+.+.+.+.++++++++++++++++..+++++++++++|+|++++||.++.+.++|+.+...++.
T Consensus        13 ~~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~   92 (244)
T PF04142_consen   13 SPKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSS   92 (244)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCc
Confidence            34455667788999999999999999999999999999999999999999999999999999999999999998863221


Q ss_pred             -----------------cchHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhcchh
Q 018307          199 -----------------LFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNV  261 (358)
Q Consensus       199 -----------------~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  261 (358)
                                       .....|+++.++++++.++..++.||.+  |+++.+.+......+.++.++.++.....++..
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~l--K~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~  170 (244)
T PF04142_consen   93 QSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLL--KRSNVSLWIQNMQLYLFGILFNLLALLLSDGSA  170 (244)
T ss_pred             cccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHh--cccchhHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence                             1135899999999999999999999999  455567777777778888877776655544432


Q ss_pred             HHHHHhhhccchHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHH
Q 018307          262 AATTIEKASEDRFVLFLLLGNATVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVT  339 (358)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~li  339 (358)
                      ..+......++...|..+...++.|....    ..+|+.+...-+....+..+++.++++++||.+++....+|..++
T Consensus       171 ~~~~g~f~G~~~~~~~~i~~~a~gGllva----~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V  244 (244)
T PF04142_consen  171 ISESGFFHGYSWWVWIVIFLQAIGGLLVA----FVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV  244 (244)
T ss_pred             cccCCchhhcchHHHHHHHHHHHhhHHHH----HHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence            22222233456667777777777776543    457999999999999999999999999999999999999998753

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.83  E-value=5.8e-17  Score=138.63  Aligned_cols=280  Identities=14%  Similarity=0.087  Sum_probs=211.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhhcccccc--cccHHHHHHHHHHH
Q 018307           53 PHIFTALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQH--ILSRKQFLKIFALS  130 (358)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  130 (358)
                      +.+..+..-++|+.    ..++.|.+-.   .| +..+...|.+-+...+.......|+.+.-+  ..+.+.+..+...+
T Consensus         8 Gil~~l~Ay~lwG~----lp~y~kll~~---~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a   79 (293)
T COG2962           8 GILLALLAYLLWGL----LPLYFKLLEP---LP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTA   79 (293)
T ss_pred             hhHHHHHHHHHHHH----HHHHHHHHcc---CC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHH
Confidence            44555555555544    4666777764   45 889999999888877776665443332211  12233444556666


Q ss_pred             HHHHHHHhhhhccccccchhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhccccccchHHHHHHHHH
Q 018307          131 AIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNSEPLFHLFGFLVCVG  210 (358)
Q Consensus       131 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~~~~~~~G~~~~l~  210 (358)
                      ++...+.....+|.+.-.+-.+++-...+|++..+++.+++|||+++.||+++++..+||..-.....+.++....++  
T Consensus        80 ~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval~la--  157 (293)
T COG2962          80 LLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVALALA--  157 (293)
T ss_pred             HHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHH--
Confidence            777888889999999988888889999999999999999999999999999999999999999988888888776665  


Q ss_pred             HHHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHhhhccchHHHHHHHHHHHHHHHHH
Q 018307          211 STAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVN  290 (358)
Q Consensus       211 a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (358)
                        ++|++|...-|+      -++|+.+-.+...+.-.+..+......+....    .....+...+.+++..|.....--
T Consensus       158 --~sf~~Ygl~RK~------~~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~----~~~~~~~~~~~LLv~aG~vTavpL  225 (293)
T COG2962         158 --LSFGLYGLLRKK------LKVDALTGLTLETLLLLPVALIYLLFLADSGQ----FLQQNANSLWLLLVLAGLVTAVPL  225 (293)
T ss_pred             --HHHHHHHHHHHh------cCCchHHhHHHHHHHHhHHHHHHHHHHhcCch----hhhcCCchHHHHHHHhhHHHHHHH
Confidence              788889886554      36677777777666665555555444443221    111234556777777777766554


Q ss_pred             HHHHHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhhhccccc
Q 018307          291 LTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKRSK  354 (358)
Q Consensus       291 ~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~~~~~~~  354 (358)
                      .....+-++.+-.+.++..+++|....+++++++||+++..+++..+++-.|..+|....-+++
T Consensus       226 ~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l~~~  289 (293)
T COG2962         226 LLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGLYTA  289 (293)
T ss_pred             HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5556678999999999999999999999999999999999999999999999999997755443

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.81  E-value=1e-16  Score=141.01  Aligned_cols=283  Identities=19%  Similarity=0.174  Sum_probs=219.4

Q ss_pred             HHHHHHHHHHHHHHHHhhcCCCc-hHHHHHHHHHHHHHHHHHHHHHhh----cccccc-----cccHHHHHHHHHHHHHH
Q 018307           64 WYLSNIGVLLLNKYLLSFYGYRY-PIFLTMLHMISCAVYSYVAIHFLE----LVPIQH-----ILSRKQFLKIFALSAIF  133 (358)
Q Consensus        64 ~~~~~~~~~~~~K~~~~~~~~~~-p~~l~~~r~~~~~~~l~~~~~~~~----~~~~~~-----~~~~~~~~~~~~~~~~~  133 (358)
                      -.+-..+.....|+.-++.+.++ |....++--.+-.+++........    .+..+.     ...+....++.+.++.|
T Consensus        23 ~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~vPa~iY  102 (345)
T KOG2234|consen   23 LTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSVPALIY  102 (345)
T ss_pred             HHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHHHHHHH
Confidence            33555566677777776643332 667777766666666655554321    111111     11232445567778999


Q ss_pred             HHHHhhhhccccccchhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhcccc-----------ccchH
Q 018307          134 SFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNSE-----------PLFHL  202 (358)
Q Consensus       134 ~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~-----------~~~~~  202 (358)
                      ++.+.+.+.++.+.+++++++..++..+.|+++..++++||.+++||.++++.+.|+.+...+.           .+...
T Consensus       103 alqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~~~~~n~~  182 (345)
T KOG2234|consen  103 ALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKSESSAQNPF  182 (345)
T ss_pred             HHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccCCCcccchh
Confidence            9999999999999999999999999999999999999999999999999999999999987211           12347


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHhhhccchHHHHHHHHH
Q 018307          203 FGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGN  282 (358)
Q Consensus       203 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (358)
                      .|....+.+....++..++.++++  |+.+.+.+....-...+|.++.+......|+...........++...|..++..
T Consensus       183 ~G~~avl~~c~~SgfAgvYfEkiL--K~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~vw~vVl~~  260 (345)
T KOG2234|consen  183 LGLVAVLVACFLSGFAGVYFEKIL--KGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSIVWLVVLLN  260 (345)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHH--hcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHHHHHHHHHH
Confidence            899999999999999999999999  566777887777777888877776666655544431122455677889999998


Q ss_pred             HHHHHHHHHHHHHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhhhccc
Q 018307          283 ATVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKR  352 (358)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~~~~~  352 (358)
                      ++-|....+    ..|+.+...-+....+..+++.+.++.++|.++|....+|..+++.++.+|...+.+
T Consensus       261 a~gGLlvs~----v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~  326 (345)
T KOG2234|consen  261 AVGGLLVSL----VMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPAR  326 (345)
T ss_pred             hccchhHHH----HHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCcc
Confidence            888865544    469999999999999999999999999999999999999999999999999966554

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.81  E-value=1e-17  Score=141.09  Aligned_cols=285  Identities=17%  Similarity=0.172  Sum_probs=214.5

Q ss_pred             HHHHHHHHHHHHHHHHHHhh-----cCCCchHHHHHHHHHHHHHHHHHHHHHhhccccc-------ccccHH----HHHH
Q 018307           62 ASWYLSNIGVLLLNKYLLSF-----YGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQ-------HILSRK----QFLK  125 (358)
Q Consensus        62 ~~~~~~~~~~~~~~K~~~~~-----~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~-------~~~~~~----~~~~  125 (358)
                      ++...++..+++..||.=+.     .+|..|+..+..-|+.-+.++.++...+.+...+       ...+.+    .-+.
T Consensus         9 ~imvvsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p~l   88 (372)
T KOG3912|consen    9 LIMVVSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNPVL   88 (372)
T ss_pred             hhhhhhccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCcce
Confidence            44456677778888987653     3577788888877776666666655433221110       001111    1234


Q ss_pred             HHHHHHHHHHHHhhhhccccccchhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhccccc-------
Q 018307          126 IFALSAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNSEP-------  198 (358)
Q Consensus       126 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~~-------  198 (358)
                      +++.+++...+..+.|.++.+++++.+|+++....+|+.+++.-+++++++.++|+|+....+|++++...|.       
T Consensus        89 fl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p~  168 (372)
T KOG3912|consen   89 FLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDPY  168 (372)
T ss_pred             ecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCCc
Confidence            5778999999999999999999999999999999999999999999999999999999999999998874431       


Q ss_pred             ---cchHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhc----chh--------HH
Q 018307          199 ---LFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIE----GNV--------AA  263 (358)
Q Consensus       199 ---~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~--------~~  263 (358)
                         +....|+++.+.+-+.-|.+.++.+|.+  ++.+.+|.+...|..++|.+++........    +..        +.
T Consensus       169 ~d~s~iitGdllIiiaqiivaiQ~v~Eek~l--~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~e  246 (372)
T KOG3912|consen  169 TDYSSIITGDLLIIIAQIIVAIQMVCEEKQL--KKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLE  246 (372)
T ss_pred             cccccchhhhHHHHHHHHHHHHHHHHHHhhh--hhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchh
Confidence               2336799999999999999999999998  678999999999999999766544433211    100        11


Q ss_pred             HHH---hhhccchHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHH
Q 018307          264 TTI---EKASEDRFVLFLLLGNATVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTI  340 (358)
Q Consensus       264 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii  340 (358)
                      .+.   ......+.....+....+...++|+.-....+..|+++..+...++.....+++.....|.+...|+.|.++.+
T Consensus       247 D~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi  326 (372)
T KOG3912|consen  247 DWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILI  326 (372)
T ss_pred             hHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHH
Confidence            111   11112223333333333334456777777889999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhh
Q 018307          341 MGVVLYSE  348 (358)
Q Consensus       341 ~g~~~~~~  348 (358)
                      .|+++|+.
T Consensus       327 ~Gi~lY~~  334 (372)
T KOG3912|consen  327 MGIILYNQ  334 (372)
T ss_pred             HHHHHHHH
Confidence            99999984

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.80  E-value=7e-17  Score=144.84  Aligned_cols=265  Identities=17%  Similarity=0.159  Sum_probs=191.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHH
Q 018307           54 HIFTALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALSAIF  133 (358)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  133 (358)
                      .+..++.+++|+...+.    .|.+.   +++ +.+..  |...+.+++..+....+. ++  ...+..+..-+..++..
T Consensus         3 ~l~~lia~~~wGs~g~~----~k~~~---g~~-~~~~~--~~~~g~l~~~~~~~~~~~-~~--~~~~~~~~~g~l~G~~w   69 (290)
T TIGR00776         3 ILIALIPALFWGSFVLI----NVKIG---GGP-YSQTL--GTTFGALILSIAIAIFVL-PE--FWALSIFLVGLLSGAFW   69 (290)
T ss_pred             hHHHHHHHHHHhhhHHH----HhccC---CCH-HHHHH--HHHHHHHHHHHHHHHHhC-Cc--ccccHHHHHHHHHHHHH
Confidence            44556666677666444    46654   355 33333  676676666655543332 21  12244455556667778


Q ss_pred             HHHHhhhhccccccchhHHHHHhh-hHHHHHHHHHHHHhccccchHH----HHHHHHHHHhhhhhcccccc-------ch
Q 018307          134 SFSVVCGNTSLRYLPVSFNQAIGA-TTPFFTAIFAFLITCKKESAEV----YCALMPVVFGIVLASNSEPL-------FH  201 (358)
Q Consensus       134 ~~~~~~~~~al~~~~~~~~~~l~~-~~p~~~~~~~~~~~~e~~~~~~----~~~~~~~~~Gv~l~~~~~~~-------~~  201 (358)
                      ..++.+.+.+.++++++.+..+.+ +.++++.+.+.+++|||.++++    ++|+++.++|+++....+.+       .+
T Consensus        70 ~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~  149 (290)
T TIGR00776        70 ALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFN  149 (290)
T ss_pred             HhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccc
Confidence            889999999999999999999998 8888999999999999999999    99999999999988643211       23


Q ss_pred             -HHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCHHHH---HHHHHHHHHHHHHHHHHHhcchhHHHHHhhhccchHHHH
Q 018307          202 -LFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNL---LLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLF  277 (358)
Q Consensus       202 -~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (358)
                       ..|++++++++++|+.|.+..|+.      +.||...   .++..+.+.++..+... ...+    +     .....+.
T Consensus       150 ~~~Gi~~~l~sg~~y~~~~~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~----~-----~~~~~~~  213 (290)
T TIGR00776       150 FKKGILLLLMSTIGYLVYVVVAKAF------GVDGLSVLLPQAIGMVIGGIIFNLGHI-LAKP----L-----KKYAILL  213 (290)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHc------CCCcceehhHHHHHHHHHHHHHHHHHh-cccc----h-----HHHHHHH
Confidence             689999999999999999999975      2567766   34433444433332221 0011    0     1223333


Q ss_pred             HHHHHHHHHHHHHHHHHHHHh-ccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhh----hhHHHHHHHHHHhhh
Q 018307          278 LLLGNATVAYLVNLTNFLVTK-HTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGM----TGFAVTIMGVVLYSE  348 (358)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~----~G~~lii~g~~~~~~  348 (358)
                      .++ .|++....+..++...+ +.++.+.++..+++|+.+.+++++++||+.+..++    +|.++++.|+.+...
T Consensus       214 ~~~-~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       214 NIL-PGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             HHH-HHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence            344 66665555666777788 99999999999999999999999999999999999    999999999887654

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.80  E-value=4.6e-19  Score=149.02  Aligned_cols=264  Identities=17%  Similarity=0.236  Sum_probs=206.2

Q ss_pred             HHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHhhhhccccc-cchhHH
Q 018307           74 LNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALSAIFSFSVVCGNTSLRY-LPVSFN  152 (358)
Q Consensus        74 ~~K~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-~~~~~~  152 (358)
                      +-+.+.++ +-..-..+|+.|+++-+.--++..-     +....+++-..+.++.....+...+++.|+++++ +|.+..
T Consensus        21 ~lE~L~~~-~pgsgNLITFaqFlFia~eGlif~s-----kf~~~k~kiplk~Y~i~V~mFF~vnv~NN~al~f~I~~PlH   94 (330)
T KOG1583|consen   21 FLELLVRN-EPGSGNLITFAQFLFIATEGLIFTS-----KFFTVKPKIPLKDYAITVAMFFIVNVTNNYALKFNIPMPLH   94 (330)
T ss_pred             HHHHHHHh-CCCCeeehHHHHHHHHHHhceeeec-----cccccCCCCchhhhheehheeeeeeeeccceeeecccceEE
Confidence            34555544 2233568899999877766555432     1111123334455556666777889999999998 999999


Q ss_pred             HHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhccc---cccc--------------h--HHHHHHHHHHHH
Q 018307          153 QAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNS---EPLF--------------H--LFGFLVCVGSTA  213 (358)
Q Consensus       153 ~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~---~~~~--------------~--~~G~~~~l~a~~  213 (358)
                      .++++.+++-++.+++++.|+|++.+|+.++....+|+++....   |...              .  ..|+.+..++.+
T Consensus        95 iIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~  174 (330)
T KOG1583|consen   95 IIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALL  174 (330)
T ss_pred             EEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999988632   1100              0  469999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHhh-----------hccchHHHHHHHHH
Q 018307          214 GRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEK-----------ASEDRFVLFLLLGN  282 (358)
Q Consensus       214 ~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~  282 (358)
                      ..|...++++...  ++++-++-+.++|.-..+.    |+.++..++-...+...           ....+..|.+++++
T Consensus       175 ~sa~mgiyqE~~Y--~kyGKh~~EalFytH~LsL----P~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n  248 (330)
T KOG1583|consen  175 LSAYMGIYQETTY--QKYGKHWKEALFYTHFLSL----PLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFN  248 (330)
T ss_pred             HHHHHHHHHHHHH--HHhcCChHHHHHHHHHhcc----chHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHH
Confidence            9999999999998  5577789999999998884    44444333322222211           11245778999999


Q ss_pred             HHHHHHHHHHHHHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhhh
Q 018307          283 ATVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEA  349 (358)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~~  349 (358)
                      ++.-+++.-..+.+..++++.+++++-++|..++.++|.++|.++++++.|+|.++++.|.++|...
T Consensus       249 ~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~  315 (330)
T KOG1583|consen  249 VLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANV  315 (330)
T ss_pred             HHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            9998888777888899999999999999999999999999999999999999999999999999754

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.76  E-value=2.5e-17  Score=134.03  Aligned_cols=145  Identities=37%  Similarity=0.623  Sum_probs=129.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccc---CCCCCHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHhhhc-----cchHH
Q 018307          204 GFLVCVGSTAGRALKSVVQGILLTSE---AEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKAS-----EDRFV  275 (358)
Q Consensus       204 G~~~~l~a~~~~a~~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~  275 (358)
                      |.+++++|.++.++++++.|+.++++   +++.++.++++|+++.+.+.++|.+...|++..........     .....
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            78899999999999999999998542   36889999999999999999999999988876443322211     14577


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhh
Q 018307          276 LFLLLGNATVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSE  348 (358)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~  348 (358)
                      +..++.+|++++++|++.+.+++++||++.++.+.+|.+..+++|+++|||+++..+++|+++.+.|.++|++
T Consensus        81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            8889999999999999999999999999999999999999999999999999999999999999999999975

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.66  E-value=4.4e-17  Score=135.59  Aligned_cols=265  Identities=13%  Similarity=0.122  Sum_probs=207.4

Q ss_pred             HHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHhhhhccccc
Q 018307           67 SNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALSAIFSFSVVCGNTSLRY  146 (358)
Q Consensus        67 ~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~  146 (358)
                      +..+..+.+.++-++ +.+.|...+++.+..-+++.-++..+++  +    .-+..|+..+.+++...-++.+...|.+|
T Consensus        29 ~~t~~a~tss~la~k-~iN~Pt~QtFl~Y~LLalVY~~~~~fR~--~----~~~~~~~hYilla~~DVEaNy~vV~AyQy  101 (336)
T KOG2766|consen   29 LITSTAFTSSELARK-GINAPTSQTFLNYVLLALVYGPIMLFRR--K----YIKAKWRHYILLAFVDVEANYFVVKAYQY  101 (336)
T ss_pred             HHHcchhhhHHHHhc-cCCCccHHHHHHHHHHHHHHhhHHHhhh--H----HHHHHHHHhhheeEEeecccEEEeeehhh
Confidence            334445556666655 4677999999999888777776665332  1    34566777888888888889899999999


Q ss_pred             cchhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhcccc--------ccchHHHHHHHHHHHHHHHHH
Q 018307          147 LPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNSE--------PLFHLFGFLVCVGSTAGRALK  218 (358)
Q Consensus       147 ~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~--------~~~~~~G~~~~l~a~~~~a~~  218 (358)
                      ++....+++.+-..+-+++++|+++|.|+.+.++.|+++++.|+++++.+|        ++....|+.+.++++-+||..
T Consensus       102 TsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVS  181 (336)
T KOG2766|consen  102 TSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVS  181 (336)
T ss_pred             cchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeeec
Confidence            999999999999999999999999999999999999999999999988654        234568999999999999999


Q ss_pred             HHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 018307          219 SVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNLTNFLVTK  298 (358)
Q Consensus       219 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (358)
                      ++..+.+.    ++.|..+++....++|+++..+- ++.|..+..    ...|+......+. .+++-|+.+-..-.+++
T Consensus       182 Nv~EEflv----kn~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~~----tl~w~~~i~~yl~-f~L~MFllYsl~pil~k  251 (336)
T KOG2766|consen  182 NVSEEFLV----KNADRVELMGFLGLFGAIISAIQ-FIFERHHVS----TLHWDSAIFLYLR-FALTMFLLYSLAPILIK  251 (336)
T ss_pred             cccHHHHH----hcCcHHHHHHHHHHHHHHHHHHH-Hhhhcccee----eEeehHHHHHHHH-HHHHHHHHHHhhHHhee
Confidence            99999987    67789999999999999887766 444433221    1122233333333 44444444444556789


Q ss_pred             ccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhhhc
Q 018307          299 HTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAK  350 (358)
Q Consensus       299 ~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~~~  350 (358)
                      ..|++.+++--.....+++++  ..||-+.+|...+..+.+..|.++|..++
T Consensus       252 ~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~re  301 (336)
T KOG2766|consen  252 TNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTRE  301 (336)
T ss_pred             cCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeeccc
Confidence            999999888888889999888  77899999999999999999999996543

>TIGR00803 nst UDP-galactose transporter

Probab=99.43  E-value=1.7e-12  Score=112.18  Aligned_cols=194  Identities=13%  Similarity=0.086  Sum_probs=133.9

Q ss_pred             cchhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhccc--------------------cc-------c
Q 018307          147 LPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNS--------------------EP-------L  199 (358)
Q Consensus       147 ~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~--------------------~~-------~  199 (358)
                      ++++.....++..++++++..+.+.+||++..++++.++...|++....+                    +.       .
T Consensus         2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g   81 (222)
T TIGR00803         2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG   81 (222)
T ss_pred             ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence            56778889999999999999999999999999999999999998753211                    11       2


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHhhhccchHHHHHH
Q 018307          200 FHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLL  279 (358)
Q Consensus       200 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (358)
                      ....|....+.+..+.++..+++++..+  .++.+.+.......+++.+.........+............++...|..+
T Consensus        82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (222)
T TIGR00803        82 NPVVGLSAVLSALLSSGFAGVYFEKILK--DGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWIVG  159 (222)
T ss_pred             cHHHHHHHHHHHHHHHhhhHHHHHHccc--CCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHHHH
Confidence            3467888888888999999999999863  23322233233223333222111111111111111110122334445444


Q ss_pred             HHHHHHHHHHHHHHHHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHh
Q 018307          280 LGNATVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLY  346 (358)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~  346 (358)
                      +.+++.+    .+..+.+++.++.+.++...++++.+.++++++|||+++..+++|..+++.|+++|
T Consensus       160 ~~~a~~~----~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       160 LLNVGGG----LCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             HHHHhcC----ceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            4443333    44567899999999999999999999999999999999999999999999998765

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=99.42  E-value=2.9e-13  Score=108.75  Aligned_cols=226  Identities=15%  Similarity=0.132  Sum_probs=173.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhccccccchhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhcccc--
Q 018307          120 RKQFLKIFALSAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNSE--  197 (358)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~--  197 (358)
                      |..+++..|.+++....++.+..+++.++++.++.+.++.-.|+.+++++.+|+|+...+++++++.+.|++++...|  
T Consensus        50 k~~~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~  129 (290)
T KOG4314|consen   50 KLFFIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNE  129 (290)
T ss_pred             eeeeeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccch
Confidence            444556677888888999999999999999999999999999999999999999999999999999999999988544  


Q ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHH----HHH-HHHhcchhHHHHHhhhccc
Q 018307          198 PLFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALIL----LPF-TLYIEGNVAATTIEKASED  272 (358)
Q Consensus       198 ~~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~-~~~~~~~~~~~~~~~~~~~  272 (358)
                      ...++.|+.++++++...|+|.|..|+..+..    +--....+++-.+..-+    .|. .+.+.+  .+.   .....
T Consensus       130 ~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnA----n~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~--VE~---~qsFA  200 (290)
T KOG4314|consen  130 HADEIIGIACAVGSAFMAALYKVLFKMFIGNA----NFGDAAHFMSCLGFFNLCFISFPALILAFTG--VEH---LQSFA  200 (290)
T ss_pred             hhhhhhhHHHHHHHHHHHHHHHHHHHHHhccC----cchhHHHHHHHHHHHHHHHHhhhHHHHHHhc--hHH---HHHHh
Confidence            45678999999999999999999999998322    22222223333332221    111 111211  111   11112


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhhhccc
Q 018307          273 RFVLFLLLGNATVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKR  352 (358)
Q Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~~~~~  352 (358)
                      ...|..+...+.+....|+.....+..+.|...|+-.....+....++.++-+-.++.....|.+++..|.++......|
T Consensus       201 ~~PWG~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~d~  280 (290)
T KOG4314|consen  201 AAPWGCLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPEDK  280 (290)
T ss_pred             hCCchhhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheecccch
Confidence            23356666667777777887777889999999999999999999999998877789999999999999999988877665


Q ss_pred             cc
Q 018307          353 SK  354 (358)
Q Consensus       353 ~~  354 (358)
                      .+
T Consensus       281 ~e  282 (290)
T KOG4314|consen  281 DE  282 (290)
T ss_pred             hh
Confidence            54

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.34  E-value=8.9e-12  Score=93.22  Aligned_cols=126  Identities=15%  Similarity=0.115  Sum_probs=107.6

Q ss_pred             HHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHhhhhcccc
Q 018307           66 LSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALSAIFSFSVVCGNTSLR  145 (358)
Q Consensus        66 ~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~  145 (358)
                      ++.....++.|..+++  .+ |.+.+.+|..+..+.+..+....++.+.....+++.|......++....+..+++.+++
T Consensus        13 ~fa~L~~iF~KIGl~~--vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Yf~ALk   89 (140)
T COG2510          13 LFAGLTPIFAKIGLEG--VD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLYFRALK   89 (140)
T ss_pred             HHHHHHHHHHHHhccc--cC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHHHHHHh
Confidence            3344447889999987  55 99999999999988888887766655443234566777778888888999999999999


Q ss_pred             ccchhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhc
Q 018307          146 YLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLAS  194 (358)
Q Consensus       146 ~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~  194 (358)
                      .-++|...-+..++|+++.+++++++|||++..+|+|+.++++|++++.
T Consensus        90 ~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          90 KGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             cCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            9999999999999999999999999999999999999999999998764

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.29  E-value=2e-11  Score=95.37  Aligned_cols=120  Identities=21%  Similarity=0.333  Sum_probs=96.9

Q ss_pred             HHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHH-HHHHHhhhhccccccc
Q 018307           70 GVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALSAI-FSFSVVCGNTSLRYLP  148 (358)
Q Consensus        70 ~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~~  148 (358)
                      ...+++|...++  ++ |...+++|+..+.+ +.+.....+..+ ....+.+.+...+..+++ ...+..+.++++++++
T Consensus         5 ~~~~~~k~~~~~--~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~   79 (126)
T PF00892_consen    5 IYSVFSKKLLKK--IS-PLSITFWRFLIAGI-LLILLLILGRKP-FKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYIS   79 (126)
T ss_pred             eHHHHHHHHhcc--CC-HHHHHHHHHHHHHH-HHHHHHhhcccc-ccCCChhhhhhhhHhhccceehHHHHHHHHHHhcc
Confidence            346677998887  66 99999999999987 544444333332 122344455566666666 5889999999999999


Q ss_pred             hhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhc
Q 018307          149 VSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLAS  194 (358)
Q Consensus       149 ~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~  194 (358)
                      ++..+.+..+.|+++.+++++++||++++++++|++++++|++++.
T Consensus        80 ~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   80 ASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999998764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.22  E-value=8.3e-11  Score=88.08  Aligned_cols=135  Identities=16%  Similarity=0.140  Sum_probs=112.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHhhhccchHHHHHHHHHH
Q 018307          204 GFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNA  283 (358)
Q Consensus       204 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (358)
                      ..++++++++++++..++.|.-.    ++.||..-+..-++....++..........+     .....+...|..++.+|
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl----~~vdp~~At~IRtiVi~~~l~~v~~~~g~~~-----~~~~~~~k~~lflilSG   74 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGL----EGVDPDFATTIRTIVILIFLLIVLLVTGNWQ-----AGGEIGPKSWLFLILSG   74 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhc----cccCccHHHHHHHHHHHHHHHHHHHhcCcee-----cccccCcceehhhhHHH
Confidence            46789999999999999999876    6778888888777777777666655543221     12223566788899999


Q ss_pred             HHHHHHHHHHHHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhh
Q 018307          284 TVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYS  347 (358)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~  347 (358)
                      +.+....+++|++++.-.+..+....-..++++++++++++||++|..+++|.+++..|..+..
T Consensus        75 la~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs  138 (140)
T COG2510          75 LAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS  138 (140)
T ss_pred             HHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence            9998888999999999999999999999999999999999999999999999999999987654

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.16  E-value=2.1e-10  Score=87.95  Aligned_cols=107  Identities=18%  Similarity=0.265  Sum_probs=83.2

Q ss_pred             HHHHHHHHHHHHHHHHHhhcccc-cccccHHHHHHHHHHHHHHH-HHHhhhhccccccchhHHHHHhhhHHHHHHHHHHH
Q 018307           92 MLHMISCAVYSYVAIHFLELVPI-QHILSRKQFLKIFALSAIFS-FSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFL  169 (358)
Q Consensus        92 ~~r~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~  169 (358)
                      .+|+..+.+++..+....++.+. .+..+++.+..++..+++.. .++.+.++|+++.| +....+.+++|+++.+++.+
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            47888888887777664333221 11122334455556566654 88999999999999 58889999999999999999


Q ss_pred             HhccccchHHHHHHHHHHHhhhhhcccccc
Q 018307          170 ITCKKESAEVYCALMPVVFGIVLASNSEPL  199 (358)
Q Consensus       170 ~~~e~~~~~~~~~~~~~~~Gv~l~~~~~~~  199 (358)
                      ++|||+++++|.++.++++|++++..++.+
T Consensus        81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   81 FFKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             HhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            999999999999999999999999877654

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.13  E-value=4.7e-10  Score=87.56  Aligned_cols=124  Identities=23%  Similarity=0.242  Sum_probs=97.6

Q ss_pred             HHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHhhhccchHHHHHHHHHHHH-HHHHHH
Q 018307          213 AGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATV-AYLVNL  291 (358)
Q Consensus       213 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  291 (358)
                      ++||.+.++.|+..    ++.|+.....+....+.+ +++.....+...      ....+...+......+++ ....+.
T Consensus         1 ~~~a~~~~~~k~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~   69 (126)
T PF00892_consen    1 FSWAIYSVFSKKLL----KKISPLSITFWRFLIAGI-LLILLLILGRKP------FKNLSPRQWLWLLFLGLLGTALAYL   69 (126)
T ss_pred             ceeeeHHHHHHHHh----ccCCHHHHHHHHHHHHHH-HHHHHHhhcccc------ccCCChhhhhhhhHhhccceehHHH
Confidence            36788999999987    458999999999999987 666666544332      111223333334444444 466677


Q ss_pred             HHHHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhh
Q 018307          292 TNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYS  347 (358)
Q Consensus       292 ~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~  347 (358)
                      ..+.++++.++...++...++|+++.++++++++|+++..+++|.++++.|+++.+
T Consensus        70 ~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   70 LYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            78889999999999999999999999999999999999999999999999998764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=99.07  E-value=7.1e-08  Score=83.80  Aligned_cols=210  Identities=16%  Similarity=0.194  Sum_probs=155.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhccccccchhHHHHHh-hhHHHHHHHHHHHHhccccchHHHH----HHHHHHHhhhhhc
Q 018307          120 RKQFLKIFALSAIFSFSVVCGNTSLRYLPVSFNQAIG-ATTPFFTAIFAFLITCKKESAEVYC----ALMPVVFGIVLAS  194 (358)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~-~~~p~~~~~~~~~~~~e~~~~~~~~----~~~~~~~Gv~l~~  194 (358)
                      ...+...+..+++...++..++.+++++.+|...-+. ....+.+.+.++++++|-.+..+++    ++++.++|+.+..
T Consensus        42 ~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts  121 (269)
T PF06800_consen   42 GTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTS  121 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhc
Confidence            3566777888999999999999999999988877665 6777889999999999977665544    7888889999887


Q ss_pred             ccccc--------chHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHH
Q 018307          195 NSEPL--------FHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTI  266 (358)
Q Consensus       195 ~~~~~--------~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  266 (358)
                      ..|.+        ....|+...+++.+.|..|.+..|..      +.|++....-+++--.+..+.+....+.+..    
T Consensus       122 ~~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~------~~~~~~~~lPqaiGm~i~a~i~~~~~~~~~~----  191 (269)
T PF06800_consen  122 YQDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAF------HVSGWSAFLPQAIGMLIGAFIFNLFSKKPFF----  191 (269)
T ss_pred             cccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhc------CCChhHhHHHHHHHHHHHHHHHhhccccccc----
Confidence            54421        22569999999999999999997763      4677777776655333333333332211100    


Q ss_pred             hhhccchHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccch----hhhhHHHHHHH
Q 018307          267 EKASEDRFVLFLLLGNATVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVM----GMTGFAVTIMG  342 (358)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~----~~~G~~lii~g  342 (358)
                           ... -+.-+.+|++.-..|+.++...++.+..+.=.++.+..+++.+.|.+++||+-+..    .++|.++++.|
T Consensus       192 -----~k~-~~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G  265 (269)
T PF06800_consen  192 -----EKK-SWKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIG  265 (269)
T ss_pred             -----ccc-hHHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHh
Confidence                 111 22234556666677788888889999999999999999999999999999997765    55688888877


Q ss_pred             HHH
Q 018307          343 VVL  345 (358)
Q Consensus       343 ~~~  345 (358)
                      ..+
T Consensus       266 ~il  268 (269)
T PF06800_consen  266 AIL  268 (269)
T ss_pred             hhc
Confidence            653

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.93  E-value=1e-07  Score=86.11  Aligned_cols=141  Identities=11%  Similarity=0.010  Sum_probs=108.9

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHhhhccchHHHHH
Q 018307          199 LFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFL  278 (358)
Q Consensus       199 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (358)
                      +....|.++.++++++|+...++.|..     .+.+|.++..+...++.+++++......+..  ...... .+...+..
T Consensus         4 ~~~~~g~~~~l~a~~~wg~~~~~~k~~-----~~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~--~~~~~~-~~~~~~~~   75 (296)
T PRK15430          4 KQTRQGVLLALAAYFIWGIAPAYFKLI-----YYVPADEILTHRVIWSFFFMVVLMSICRQWS--YLKTLI-QTPQKIFM   75 (296)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHHHHccHH--HHHHHH-cCHHHHHH
Confidence            345679999999999999999999764     4589999999999999887776654432211  100000 12222333


Q ss_pred             HHHHHHHHHHHHHHHHHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhh
Q 018307          279 LLGNATVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYS  347 (358)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~  347 (358)
                      ...+++.....+.+.++++++.++...++..+..|++..++++++++|+++..+++|.++.+.|+.+..
T Consensus        76 ~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         76 LAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            334555555667778899999999999999999999999999999999999999999999999988764

>TIGR00688 rarD rarD protein

Probab=98.93  E-value=8.1e-08  Score=84.94  Aligned_cols=139  Identities=12%  Similarity=0.036  Sum_probs=107.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHhhhcc-chHHHHHHHH
Q 018307          203 FGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASE-DRFVLFLLLG  281 (358)
Q Consensus       203 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  281 (358)
                      .|..+.++++++|+...+..|..     .+.+|.++.++-.+++.+.+.+........... ....... ....+..+..
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~-----~~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~   75 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLL-----KPLPATDILGHRMIWSFPFMLLSVTLFRQWAAL-IERLKRIQKRPLILSLLL   75 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHh-----ccCCHHHHHHHHHHHHHHHHHHHHHHHcchHHH-HHHHhCcccchHHHHHHH
Confidence            37899999999999999999974     358999999999999988876665443221110 0001101 1122444555


Q ss_pred             HHHHHHHHHHHHHHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhh
Q 018307          282 NATVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYS  347 (358)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~  347 (358)
                      .++.....+.+.+.++++.++.+.++..+..|+++.++++++++|+++..+++|.++.+.|+.+..
T Consensus        76 ~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~  141 (256)
T TIGR00688        76 CGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI  141 (256)
T ss_pred             HHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence            566666677788889999999999999999999999999999999999999999999999988654

This uncharacterized protein is predicted to have many membrane-spanning domains.

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.84  E-value=1.7e-07  Score=83.05  Aligned_cols=128  Identities=16%  Similarity=0.088  Sum_probs=94.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHH-HHHHH
Q 018307           59 LIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALSAI-FSFSV  137 (358)
Q Consensus        59 ~~~~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  137 (358)
                      .+.++-.++.....+..|...++++.+ +.....+++..+.+++.+.....+..+  . .+...+...+..+++ ...+.
T Consensus       131 ~~~l~a~~~~a~~~~~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~  206 (260)
T TIGR00950       131 LLGLGSGISFALGTVLYKRLVKKEGPE-LLQFTGWVLLLGALLLLPFAWFLGPNP--Q-ALSLQWGALLYLGLIGTALAY  206 (260)
T ss_pred             HHHHHHHHHHHHHHHHHhHHhhcCCch-HHHHHHHHHHHHHHHHHHHHHhcCCCC--C-cchHHHHHHHHHHHHHHHHHH
Confidence            333333344444466678887664422 445565788888888777665322111  1 234455555556655 46789


Q ss_pred             hhhhccccccchhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhh
Q 018307          138 VCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGI  190 (358)
Q Consensus       138 ~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv  190 (358)
                      .+.++++++.+++.++++.++.|++++++++++++|+++..++.|..+++.|+
T Consensus       207 ~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       207 FLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999999999999999999986

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.80  E-value=1.7e-07  Score=83.98  Aligned_cols=133  Identities=14%  Similarity=0.136  Sum_probs=99.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHhhhccchHHHHHHHHHHH
Q 018307          205 FLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNAT  284 (358)
Q Consensus       205 ~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (358)
                      ..+.+++++++|.+.+..|+..    ++.++  ...+....+.+.+.|+.......  .   .........+.....+++
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~----~~~~~--~~~~~~~~~~~~l~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~   71 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHA----DKEPD--FLWWALLAHSVLLTPYGLWYLAQ--V---GWSRLPATFWLLLAISAV   71 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcC----CchhH--HHHHHHHHHHHHHHHHHHHhccc--C---CCCCcchhhHHHHHHHHH
Confidence            5788999999999999999875    22233  23555566666666665542100  0   011112334555666777


Q ss_pred             HHHHHHHHHHHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhh
Q 018307          285 VAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSE  348 (358)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~  348 (358)
                      ....+..+.+.+.++.++...+++.+..|+++.+++++++||+++..+++|.++++.|+.+...
T Consensus        72 ~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~  135 (281)
T TIGR03340        72 ANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL  135 (281)
T ss_pred             HHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence            7777778888899999999999999999999999999999999999999999999999987654

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=98.69  E-value=2.4e-05  Score=71.01  Aligned_cols=287  Identities=13%  Similarity=0.035  Sum_probs=168.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhhcc---cccccccHHHHHHHHHH
Q 018307           53 PHIFTALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELV---PIQHILSRKQFLKIFAL  129 (358)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~  129 (358)
                      +.+..++.+.+-.+++.+...-.|. .++.+++ .++.  ...+++.++.....-....+   ..-...+...+...+..
T Consensus         4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~w~wE-~~W~--v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l~   79 (345)
T PRK13499          4 AIILGIIWHLIGGASSGSFYAPFKK-VKKWSWE-TMWS--VGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFLF   79 (345)
T ss_pred             hhHHHHHHHHHHHHHhhcccccccc-cCCCchh-HHHH--HHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHHH
Confidence            3455666666666677766666676 3332333 1122  11112222222111101000   00111234556667788


Q ss_pred             HHHHHHHHhhhhccccccchhHHHHHh-hhHHHHHHHHHHHHhcccc-------chHHHHHHHHHHHhhhhhcc----cc
Q 018307          130 SAIFSFSVVCGNTSLRYLPVSFNQAIG-ATTPFFTAIFAFLITCKKE-------SAEVYCALMPVVFGIVLASN----SE  197 (358)
Q Consensus       130 ~~~~~~~~~~~~~al~~~~~~~~~~l~-~~~p~~~~~~~~~~~~e~~-------~~~~~~~~~~~~~Gv~l~~~----~~  197 (358)
                      +++...++..+..+++++.+|...-+. .++.++..++..++++|-.       ...-.+++++.++|+++...    .|
T Consensus        80 G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k~  159 (345)
T PRK13499         80 GALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLKE  159 (345)
T ss_pred             HHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence            899999999999999999998877555 6788888888888887632       23567888899999998875    22


Q ss_pred             c---------cchHHHHHHHHHHHHHHHHHH-------HHHHHhhcccCCCCCHHHHHHHHHH---HHHHHHHHHHHHh-
Q 018307          198 P---------LFHLFGFLVCVGSTAGRALKS-------VVQGILLTSEAEKLHSMNLLLYMAP---MSALILLPFTLYI-  257 (358)
Q Consensus       198 ~---------~~~~~G~~~~l~a~~~~a~~~-------v~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~-  257 (358)
                      .         .....|+++++++.+.+++|.       ...+...   +.+.++.....-+..   .+.++.-...... 
T Consensus       160 ~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~---~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~  236 (345)
T PRK13499        160 RKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAA---ALGVDPLYAALPSYVVIMGGGAITNLGFCFIR  236 (345)
T ss_pred             cccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhh---hcCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            2         123579999999999999999       4433321   234555544444433   3333222211111 


Q ss_pred             --cchhHHHHHhhhccc----hHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHH----HhhhhhHHHHHHhhHhhcCCc
Q 018307          258 --EGNVAATTIEKASED----RFVLFLLLGNATVAYLVNLTNFLVTKHTSALTLQ----VLGNAKAAVAAVVSVLIFRNP  327 (358)
Q Consensus       258 --~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s----~~~~l~~~~~~~~~~~~~ge~  327 (358)
                        ........ ......    ..-....++.|++-+..++.+...-++.+.....    ....+..+++.+.|. ++||.
T Consensus       237 ~~k~~~~~~~-~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~  314 (345)
T PRK13499        237 LAKNKDLSLK-ADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEW  314 (345)
T ss_pred             HhhCCCcccc-hhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhc
Confidence              00000000 011111    2233444666777666666666666666444333    333667788999998 59998


Q ss_pred             cc------chhhhhHHHHHHHHHHhhh
Q 018307          328 VT------VMGMTGFAVTIMGVVLYSE  348 (358)
Q Consensus       328 ~~------~~~~~G~~lii~g~~~~~~  348 (358)
                      =+      ...++|.+++++|..+...
T Consensus       315 K~a~~k~~~~l~~G~vliI~g~~lig~  341 (345)
T PRK13499        315 KGASRRPVRVLSLGCVVIILAANIVGL  341 (345)
T ss_pred             cCCCccchhHHHHHHHHHHHHHHHHhh
Confidence            77      5678999999999887654

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.68  E-value=1.4e-07  Score=84.55  Aligned_cols=209  Identities=16%  Similarity=0.155  Sum_probs=120.1

Q ss_pred             HHHHHHHHhhhhccccccchhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhcc-cccc---ch----
Q 018307          130 SAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASN-SEPL---FH----  201 (358)
Q Consensus       130 ~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~-~~~~---~~----  201 (358)
                      -+.+.++..+...|+.+.|.+..+-+.+...++..+++..++|||++++++.|+.+.++|..++.. ++.+   .+    
T Consensus        57 ~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t~~~l  136 (300)
T PF05653_consen   57 LLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHTLDEL  136 (300)
T ss_pred             HHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCCHHHH
Confidence            345677888999999999999999999999999999999999999999999999999999987652 2111   11    


Q ss_pred             --------HHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHH-------HHHHHhcchhHHHHH
Q 018307          202 --------LFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILL-------PFTLYIEGNVAATTI  266 (358)
Q Consensus       202 --------~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-------~~~~~~~~~~~~~~~  266 (358)
                              ...+...... +...+.....+|.-   ++  +........++++....+       .+....+++      
T Consensus       137 ~~~~~~~~fl~y~~~~~~-~~~~L~~~~~~r~g---~~--~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~------  204 (300)
T PF05653_consen  137 IALLSQPGFLVYFILVLV-LILILIFFIKPRYG---RR--NILVYISICSLIGSFTVLSAKAISILIKLTFSGD------  204 (300)
T ss_pred             HHHhcCcceehhHHHHHH-HHHHHHHhhcchhc---cc--ceEEEEEEeccccchhhhHHHHHHHHHHHHhcCc------
Confidence                    1111111111 11111111122210   11  111000111111111100       000111111      


Q ss_pred             hhhccchHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHhhhh-hHHHHHHhhHhhcCCc--ccc----hhhhhHHHH
Q 018307          267 EKASEDRFVLFLLLGNATVAYLVNLTNFLVTKHTSALTLQVLGNA-KAAVAAVVSVLIFRNP--VTV----MGMTGFAVT  339 (358)
Q Consensus       267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l-~~~~~~~~~~~~~ge~--~~~----~~~~G~~li  339 (358)
                       .....+..|.+++....+....-...+.++++.++..+....+. -...+++-|.++|+|.  .++    ....|..++
T Consensus       205 -~~f~~~~~y~l~~~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~i  283 (300)
T PF05653_consen  205 -NQFTYPLTYLLLLVLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLII  283 (300)
T ss_pred             -hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHH
Confidence             11123344555444444444444556778888887766655554 4456677778888875  455    356677888


Q ss_pred             HHHHHHhhhhcc
Q 018307          340 IMGVVLYSEAKK  351 (358)
Q Consensus       340 i~g~~~~~~~~~  351 (358)
                      +.|+++.+..|.
T Consensus       284 i~GV~lL~~~~~  295 (300)
T PF05653_consen  284 IIGVFLLSSSKD  295 (300)
T ss_pred             HHhhheeeccCc
Confidence            888888765443

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.60  E-value=1.7e-06  Score=79.82  Aligned_cols=137  Identities=12%  Similarity=0.172  Sum_probs=108.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHhhhccchHHHHHHHHHH
Q 018307          204 GFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNA  283 (358)
Q Consensus       204 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (358)
                      -....++..++|+...++.|..+   +.++++.....+-..+++++++|+....+....     ........+..+...+
T Consensus        14 ~~~~~~~~q~~~~~~~~~~k~a~---~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~-----~~~~~~~~~~~l~l~g   85 (358)
T PLN00411         14 FLTAMLATETSVVGISTLFKVAT---SKGLNIYPFLGYSYLLASLLLLPSLFFTNRSRS-----LPPLSVSILSKIGLLG   85 (358)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHH---HCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcc-----cCcchHHHHHHHHHHH
Confidence            45667777899999999999997   578999999999999999998888766432110     0111223345555566


Q ss_pred             HHHHHHHHHHHHHHhccchhHHHHhhhhhHHHHHHhhHhh------cCCcccchhhhhHHHHHHHHHHhhh
Q 018307          284 TVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLI------FRNPVTVMGMTGFAVTIMGVVLYSE  348 (358)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~------~ge~~~~~~~~G~~lii~g~~~~~~  348 (358)
                      ++++.++...+..++++++...++..+..|+++.++++++      ++|+++..+++|.++.+.|+.+...
T Consensus        86 ~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~  156 (358)
T PLN00411         86 FLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIF  156 (358)
T ss_pred             HHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHH
Confidence            6665566677889999999999999999999999999999      6999999999999999999887653

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.53  E-value=1.7e-06  Score=65.71  Aligned_cols=65  Identities=17%  Similarity=0.239  Sum_probs=60.4

Q ss_pred             HHHHHHHhhhhccccccchhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhcc
Q 018307          131 AIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASN  195 (358)
Q Consensus       131 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~  195 (358)
                      +++.....+...+++.+|.+.+..+.++.++++.+++++++|||+++++++|+.++++|++++..
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~  109 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS  109 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            45677889999999999999999999999999999999999999999999999999999987653

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.51  E-value=7.1e-06  Score=66.38  Aligned_cols=132  Identities=10%  Similarity=0.032  Sum_probs=101.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHhh-----cCCCchHHHHHHHHHHHHHHHHHHHHHhhcccccc----c-c-----cHHHHHH
Q 018307           61 IASWYLSNIGVLLLNKYLLSF-----YGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQH----I-L-----SRKQFLK  125 (358)
Q Consensus        61 ~~~~~~~~~~~~~~~K~~~~~-----~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~----~-~-----~~~~~~~  125 (358)
                      ++...+......++.|..+++     .+.+ |..+..+....+.+++.+.....+..+..+    . .     ....+..
T Consensus         5 ~l~s~~~~al~~v~~~~~~~~~~~~~~~~~-~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~   83 (153)
T PF03151_consen    5 ALASSLFSALRNVLIKKLLKKVSSNSKKLN-PLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFL   83 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcccccccCCC-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHH
Confidence            344445555556677887776     4666 888888888888888887766443332100    0 0     2244555


Q ss_pred             HHHHHHHHHHHHhhhhccccccchhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhh
Q 018307          126 IFALSAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLA  193 (358)
Q Consensus       126 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~  193 (358)
                      .+..+++....+...+..++++++-+.+++.....+.+.+++.++++|+++..++.|+++.++|+++.
T Consensus        84 ~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Y  151 (153)
T PF03151_consen   84 LILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLY  151 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhee
Confidence            56667777888999999999999999999999999999999999999999999999999999999864

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.51  E-value=6.3e-06  Score=74.35  Aligned_cols=129  Identities=9%  Similarity=-0.021  Sum_probs=89.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHH-HHHHH
Q 018307           59 LIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALSAI-FSFSV  137 (358)
Q Consensus        59 ~~~~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  137 (358)
                      +..++-.++.....+..|...++  .+ |..... ...++.+++.+.......   ....+...+...+..+++ ..+++
T Consensus       151 ll~l~aa~~~a~~~v~~r~~~~~--~~-~~~~~~-~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~l~lgv~~t~~~~  223 (293)
T PRK10532        151 ALALGAGACWAIYILSGQRAGAE--HG-PATVAI-GSLIAALIFVPIGALQAG---EALWHWSILPLGLAVAILSTALPY  223 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcc--CC-chHHHH-HHHHHHHHHHHHHHHccC---cccCCHHHHHHHHHHHHHHHHHHH
Confidence            33344444444456666777655  33 555544 445555555554442211   111233344434455555 45678


Q ss_pred             hhhhccccccchhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhc
Q 018307          138 VCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLAS  194 (358)
Q Consensus       138 ~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~  194 (358)
                      .++++++++.+++.++++..++|++..++++++++|+++..+++|.+++++|++...
T Consensus       224 ~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~  280 (293)
T PRK10532        224 SLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGST  280 (293)
T ss_pred             HHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence            899999999999999999999999999999999999999999999999999998875

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.45  E-value=8.1e-06  Score=73.63  Aligned_cols=109  Identities=15%  Similarity=0.146  Sum_probs=84.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHH-HHHHHhhhhccccccchhHHHHHhhhHHHHHHH
Q 018307           87 PIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALSAI-FSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAI  165 (358)
Q Consensus        87 p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~  165 (358)
                      +...+.+++.++..++.+....... ......+...+...+..++. ...+..+.++++++.+++.++++..+.|++.++
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i  255 (292)
T PRK11272        177 GMMAGAAEMLAAGVVLLIASLLSGE-RLTALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVL  255 (292)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHcCC-cccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Confidence            5566778888887776665542221 11111234455566666665 467788999999999999999999999999999


Q ss_pred             HHHHHhccccchHHHHHHHHHHHhhhhhccc
Q 018307          166 FAFLITCKKESAEVYCALMPVVFGIVLASNS  196 (358)
Q Consensus       166 ~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~  196 (358)
                      +++++++|+++..+++|..+++.|+.+....
T Consensus       256 ~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~  286 (292)
T PRK11272        256 LGTGLGGETLSPIEWLALGVIVFAVVLVTLG  286 (292)
T ss_pred             HHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999887643

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.36  E-value=2.4e-05  Score=67.92  Aligned_cols=142  Identities=13%  Similarity=0.061  Sum_probs=110.0

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHhhhccchHHHHHHH
Q 018307          201 HLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLL  280 (358)
Q Consensus       201 ~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (358)
                      +..|+++++.+-+.|++--.+.|-+     ++.++.++..+-.+.+.++++..........  +..+ ...++..+..+.
T Consensus         5 ~~~Gil~~l~Ay~lwG~lp~y~kll-----~~~~~~eIlahRviwS~~~~l~ll~~~r~~~--~~~~-~~~~p~~~~~~~   76 (293)
T COG2962           5 SRKGILLALLAYLLWGLLPLYFKLL-----EPLPATEILAHRVIWSFPFMLALLFLLRQWR--ELKQ-LLKQPKTLLMLA   76 (293)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHH-----ccCCHHHHHHHHHHHHHHHHHHHHHHHhhhH--HHHH-HHhCcHHHHHHH
Confidence            4469999999999999999999887     6788999999999999888776655543322  1111 223444555555


Q ss_pred             HHHHHHHHHHHHHHHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhhhc
Q 018307          281 GNATVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAK  350 (358)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~~~  350 (358)
                      .+++.-..--....++..+-....+|..-+++|.+.+++|.++++|+++..|++..++...|+..-++..
T Consensus        77 l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~  146 (293)
T COG2962          77 LTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLL  146 (293)
T ss_pred             HHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc
Confidence            5555543333335567888899999999999999999999999999999999999999999998776543

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.35  E-value=1.6e-05  Score=71.75  Aligned_cols=129  Identities=15%  Similarity=0.076  Sum_probs=87.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHh
Q 018307           59 LIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALSAIFSFSVV  138 (358)
Q Consensus        59 ~~~~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (358)
                      +++++-.+++....+++|...++  .+ |....  . ....+.+.+.....+ .. ....+.+.+...+..++...+++.
T Consensus       159 ~~~l~aa~~~A~~~v~~k~~~~~--~~-~~~~~--~-~~~~~~l~~~~~~~~-~~-~~~~~~~~~~~l~~~~~~t~~~~~  230 (295)
T PRK11689        159 GLAFIGAFIWAAYCNVTRKYARG--KN-GITLF--F-ILTALALWIKYFLSP-QP-AMVFSLPAIIKLLLAAAAMGFGYA  230 (295)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCC--CC-chhHH--H-HHHHHHHHHHHHHhc-Cc-cccCCHHHHHHHHHHHHHHHHHHH
Confidence            33444444445556667776554  33 54432  2 222233322222121 11 111233455555555666677899


Q ss_pred             hhhccccccchhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhcc
Q 018307          139 CGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASN  195 (358)
Q Consensus       139 ~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~  195 (358)
                      +.++++++.+++..+.+.+..|++..++++++++|+++..+++|.++++.|+.+...
T Consensus       231 l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        231 AWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence            999999999999999999999999999999999999999999999999999987753

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.33  E-value=7.8e-06  Score=74.13  Aligned_cols=138  Identities=12%  Similarity=0.006  Sum_probs=94.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhhcccccccc--------c-HHHHHHHH
Q 018307           57 TALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHIL--------S-RKQFLKIF  127 (358)
Q Consensus        57 ~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~--------~-~~~~~~~~  127 (358)
                      ..+.+.+..+++....+..|...++.+.+ |..++.++...+.+.+.+........+.....        . ...+...+
T Consensus       146 G~~~~l~a~~~~a~~~v~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (302)
T TIGR00817       146 GFLSAMISNITFVSRNIFSKKAMTIKSLD-KTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSL  224 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccCCCC-cccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHH
Confidence            44445555555555667778777632355 88999999988888877776532211100000        0 00111122


Q ss_pred             HHHH-HHHHHHhhhhccccccchhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhcc
Q 018307          128 ALSA-IFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASN  195 (358)
Q Consensus       128 ~~~~-~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~  195 (358)
                      ..++ .+...+.+.+.+++++++.++++.....|+++.++++++++|+++..+++|.++++.|+.+...
T Consensus       225 ~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~  293 (302)
T TIGR00817       225 VAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSR  293 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHH
Confidence            2222 2333345667899999999999999999999999999999999999999999999999998764

specificities overlap.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.32  E-value=1.9e-05  Score=61.46  Aligned_cols=123  Identities=13%  Similarity=0.044  Sum_probs=79.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHhhhccchHHHHHHHHH
Q 018307          203 FGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGN  282 (358)
Q Consensus       203 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (358)
                      .|+++.+.+.++.+...++.|+-++  +.+  ..+.... .. .    .... ..              ++  +..+..+
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~--~~g--~~~~~~~-~~-~----~~~~-~~--------------~p--~~~i~lg   54 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMS--RLP--LLSHAWD-FI-A----ALLA-FG--------------LA--LRAVLLG   54 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHh--hCC--CccchhH-HH-H----HHHH-Hh--------------cc--HHHHHHH
Confidence            3788899999999999999998762  111  1111000 00 0    0000 00              11  0011122


Q ss_pred             HHHHHHHHHHHHHHHhccchhHHHHhhhhhHHHHHHhhHh--hcCCcccchhhhhHHHHHHHHHHhhhhccc
Q 018307          283 ATVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVL--IFRNPVTVMGMTGFAVTIMGVVLYSEAKKR  352 (358)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~--~~ge~~~~~~~~G~~lii~g~~~~~~~~~~  352 (358)
                      .++.....+.+..++++.+...+..+..+.++...+.++.  +|||++|+.+++|.++++.|+++.++.++|
T Consensus        55 l~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~~  126 (129)
T PRK02971         55 LAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTTK  126 (129)
T ss_pred             HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCCC
Confidence            2222233355677889999999998888888778777774  899999999999999999999998765544

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.31  E-value=3.9e-05  Score=69.41  Aligned_cols=140  Identities=11%  Similarity=0.022  Sum_probs=91.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhhcccc----cccccHHHHHHHHHHHHH
Q 018307           57 TALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPI----QHILSRKQFLKIFALSAI  132 (358)
Q Consensus        57 ~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~  132 (358)
                      ..+++++-..++....+.+|...++.+-+.......+..+.+.+..............    ....+...+...+..+++
T Consensus       144 G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~  223 (299)
T PRK11453        144 GFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFV  223 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHH
Confidence            3444444445555556667776544222213344455555554443333221111100    011233455555565654


Q ss_pred             H-HHHHhhhhccccccchhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhccc
Q 018307          133 F-SFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNS  196 (358)
Q Consensus       133 ~-~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~  196 (358)
                      . ..++.+.+.++++.+++.++.+....|++..++++++++|+++..+++|.+++++|+.+...+
T Consensus       224 ~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~  288 (299)
T PRK11453        224 ATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFG  288 (299)
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcc
Confidence            4 567889999999999999999999999999999999999999999999999999999887643

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=98.24  E-value=5.9e-05  Score=69.76  Aligned_cols=138  Identities=12%  Similarity=0.047  Sum_probs=92.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhcC-----CCchHHHHHHHHHHHHHHHHHHHHHhhccccc--------cccc---
Q 018307           56 FTALIIASWYLSNIGVLLLNKYLLSFYG-----YRYPIFLTMLHMISCAVYSYVAIHFLELVPIQ--------HILS---  119 (358)
Q Consensus        56 ~~~~~~~~~~~~~~~~~~~~K~~~~~~~-----~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~--------~~~~---  119 (358)
                      ...+.+.+-.+++....++.|...++++     .+ +..+..+....+++++.++.......+..        ....   
T Consensus       194 ~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~  272 (350)
T PTZ00343        194 LAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLT-ASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTK  272 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccccccccCC-HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccch
Confidence            3444555555666666777888876532     33 55566666777777776665422111000        0000   


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhccccccchhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhc
Q 018307          120 RKQFLKIFALSAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLAS  194 (358)
Q Consensus       120 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~  194 (358)
                      .......+..++.+.+.+.+.+++++++++.++++.....|+++.++++++++|+++..+++|.+++++|+.+..
T Consensus       273 ~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs  347 (350)
T PTZ00343        273 GIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYS  347 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHh
Confidence            111122233344455555566679999999999999999999999999999999999999999999999998764

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.17  E-value=6.3e-05  Score=57.50  Aligned_cols=73  Identities=15%  Similarity=0.230  Sum_probs=59.8

Q ss_pred             HHHHHHHHH-HHHHHHHHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhhhccc
Q 018307          279 LLGNATVAY-LVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKR  352 (358)
Q Consensus       279 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~~~~~  352 (358)
                      .+..++++. ..+...+.+.++.++ .+.....+.|+++.++++++++|+++..+++|.++++.|+.+..+.+..
T Consensus        37 ~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   37 LILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            334344443 555667778899885 7889999999999999999999999999999999999999998776543

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=98.09  E-value=6.1e-05  Score=67.79  Aligned_cols=132  Identities=14%  Similarity=0.050  Sum_probs=98.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHhhhccchHHHHHHHHHH
Q 018307          204 GFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNA  283 (358)
Q Consensus       204 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (358)
                      |++++++++++|+...+..|+.   +  +.++.+...  ..++.+++.........+.        ......+..-+.+|
T Consensus         2 ~~l~~lia~~~wGs~g~~~k~~---~--g~~~~~~~~--~~~g~l~~~~~~~~~~~~~--------~~~~~~~~~g~l~G   66 (290)
T TIGR00776         2 DILIALIPALFWGSFVLINVKI---G--GGPYSQTLG--TTFGALILSIAIAIFVLPE--------FWALSIFLVGLLSG   66 (290)
T ss_pred             chHHHHHHHHHHhhhHHHHhcc---C--CCHHHHHHH--HHHHHHHHHHHHHHHhCCc--------ccccHHHHHHHHHH
Confidence            6789999999999999999986   2  555555542  3444444433333221111        12355566666777


Q ss_pred             HHHHHHHHHHHHHHhccchhHHHHhhh-hhHHHHHHhhHhhcCCcccchh----hhhHHHHHHHHHHhhhhc
Q 018307          284 TVAYLVNLTNFLVTKHTSALTLQVLGN-AKAAVAAVVSVLIFRNPVTVMG----MTGFAVTIMGVVLYSEAK  350 (358)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~s~~~~-l~~~~~~~~~~~~~ge~~~~~~----~~G~~lii~g~~~~~~~~  350 (358)
                      +.-...|+.++.++++.+....-.+.+ +.++.+.+++.+++||+.+..+    ++|.++++.|+++....+
T Consensus        67 ~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~  138 (290)
T TIGR00776        67 AFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSK  138 (290)
T ss_pred             HHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecc
Confidence            777777888899999999998877777 7888999999999999999999    999999999998876654

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=98.04  E-value=1.6e-05  Score=69.72  Aligned_cols=210  Identities=17%  Similarity=0.127  Sum_probs=123.4

Q ss_pred             HHHHHHHHHhhhhccccccchhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhccccccch-------
Q 018307          129 LSAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNSEPLFH-------  201 (358)
Q Consensus       129 ~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~~~~~-------  201 (358)
                      .-+.+.++-.+.+.|+.+.|++..+-+-+++.++.++++..+++||++....+|+.+.++|-.+++...++.+       
T Consensus        70 G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~e  149 (335)
T KOG2922|consen   70 GMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVEE  149 (335)
T ss_pred             HHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccccHHH
Confidence            3456788899999999999999999999999999999999999999999999999999999887763322111       


Q ss_pred             ------HHHHHHHHHHHH-HHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHH--------HH--HHhcchhHHH
Q 018307          202 ------LFGFLVCVGSTA-GRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLP--------FT--LYIEGNVAAT  264 (358)
Q Consensus       202 ------~~G~~~~l~a~~-~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--------~~--~~~~~~~~~~  264 (358)
                            -.+.+.-.+-.+ ...+-..+.+       .+.....++.|..+.+.+-.+-        .+  ..+.+.    
T Consensus       150 l~~~~~~~~Fliy~~~iil~~~il~~~~~-------p~~g~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~----  218 (335)
T KOG2922|consen  150 VWELATEPGFLVYVIIIILIVLILIFFYA-------PRYGQTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGN----  218 (335)
T ss_pred             HHHHhcCccHHHHHHHHHHHHHHHheeec-------ccccccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCC----
Confidence                  012111111111 1111111111       1111223444444444332110        00  011111    


Q ss_pred             HHhhhccchHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHhhhh-hHHHHHHhhHhhcCCc--ccc----hhhhhHH
Q 018307          265 TIEKASEDRFVLFLLLGNATVAYLVNLTNFLVTKHTSALTLQVLGNA-KAAVAAVVSVLIFRNP--VTV----MGMTGFA  337 (358)
Q Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l-~~~~~~~~~~~~~ge~--~~~----~~~~G~~  337 (358)
                         .....+..|..++....+....-...+.+++..++..++...++ -..++++.|.++|.|-  .+.    ....|..
T Consensus       219 ---~ql~~~~ty~~~l~~~~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~  295 (335)
T KOG2922|consen  219 ---NQLFYPLTWIFLLVVATCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFV  295 (335)
T ss_pred             ---cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHH
Confidence               11112233433333333322222224567777777766666655 5667788888889874  333    3678888


Q ss_pred             HHHHHHHHhhhhccc
Q 018307          338 VTIMGVVLYSEAKKR  352 (358)
Q Consensus       338 lii~g~~~~~~~~~~  352 (358)
                      .++.|+++.+..|.+
T Consensus       296 ti~~G~flL~~~kd~  310 (335)
T KOG2922|consen  296 TIFLGIFLLHRTKDM  310 (335)
T ss_pred             HhhheeeEeeeeccc
Confidence            999998888655443

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.98  E-value=0.0002  Score=64.95  Aligned_cols=132  Identities=14%  Similarity=0.115  Sum_probs=93.8

Q ss_pred             HHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHH
Q 018307          214 GRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNATVAYLVNLTN  293 (358)
Q Consensus       214 ~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (358)
                      ++..+.+.+|++.+++.....+..+++.+.....+...+.......+.      .   ....+.-....+++.++.....
T Consensus        11 ~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~------~---~~~~~~~~~~~~~~~~~~~~~~   81 (303)
T PF08449_consen   11 GCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPK------S---RKIPLKKYAILSFLFFLASVLS   81 (303)
T ss_pred             HHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccC------C---CcChHHHHHHHHHHHHHHHHHH
Confidence            344566788888743222224777888887777766555444322010      0   1111222333345555666677


Q ss_pred             HHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhhhccccc
Q 018307          294 FLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKRSK  354 (358)
Q Consensus       294 ~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~~~~~~~  354 (358)
                      +.++++.+..+..+....+++.+++++.+++|++.+..++++.+++..|+.+....+.+++
T Consensus        82 ~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~  142 (303)
T PF08449_consen   82 NAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSS  142 (303)
T ss_pred             HHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccc
Confidence            7889999999999999999999999999999999999999999999999999988765543

; GO: 0055085 transmembrane transport

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.94  E-value=5.5e-05  Score=58.93  Aligned_cols=72  Identities=19%  Similarity=0.219  Sum_probs=62.8

Q ss_pred             HHHHHHHHHHHHhhhhccccccchhHHHHHhhhHHHHHHHHHHH--HhccccchHHHHHHHHHHHhhhhhcccc
Q 018307          126 IFALSAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFL--ITCKKESAEVYCALMPVVFGIVLASNSE  197 (358)
Q Consensus       126 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~--~~~e~~~~~~~~~~~~~~~Gv~l~~~~~  197 (358)
                      ....-+++.++..+.++++++.|++.+.-+.+..+.++.+.++.  ++||+++..+++|++++++|++++..++
T Consensus        51 i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~  124 (129)
T PRK02971         51 VLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT  124 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence            34444677889999999999999999999999999888888874  8999999999999999999999987543

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=97.82  E-value=0.0012  Score=59.08  Aligned_cols=132  Identities=19%  Similarity=0.181  Sum_probs=90.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHH-HHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHH-
Q 018307           57 TALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTM-LHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALSAIFS-  134 (358)
Q Consensus        57 ~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~-~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  134 (358)
                      .....+.-..+.....+.+|... +  .+ +..... +++............  ...+  .......+......++... 
T Consensus       155 g~~~~l~a~~~~a~~~~~~~~~~-~--~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~~g~~~~~  226 (292)
T COG0697         155 GLLLALAAALLWALYTALVKRLS-R--LG-PVTLALLLQLLLALLLLLLFFL--SGFG--APILSRAWLLLLYLGVFSTG  226 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhc-C--CC-hHHHHHHHHHHHHHHHHHHHHh--cccc--ccCCHHHHHHHHHHHHHHHH
Confidence            33334444444445566667665 3  23 555555 454422222222221  1111  1234456666667776665 


Q ss_pred             HHHhhhhccccccchhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhccc
Q 018307          135 FSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNS  196 (358)
Q Consensus       135 ~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~  196 (358)
                      .++.+.+++++..+++..+.+..+.|++..++++++++|+++..+++|.++++.|+.+....
T Consensus       227 i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         227 LAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            58999999999999999999999999999999999999999999999999999999987644

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.75  E-value=0.00013  Score=55.69  Aligned_cols=71  Identities=18%  Similarity=0.254  Sum_probs=63.2

Q ss_pred             HHHHHHHHHHHHhhhhccccccchhHHHHHh-hhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhccc
Q 018307          126 IFALSAIFSFSVVCGNTSLRYLPVSFNQAIG-ATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNS  196 (358)
Q Consensus       126 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~-~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~  196 (358)
                      .+...+++..++.+...+++++|.+.+..+- ....+.+.+.+.+++||++++.+++++.++++|++.+...
T Consensus        33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~  104 (120)
T PRK10452         33 FILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG  104 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence            4555677888999999999999999998885 6899999999999999999999999999999999988643

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.73  E-value=0.00032  Score=53.20  Aligned_cols=57  Identities=18%  Similarity=0.218  Sum_probs=51.0

Q ss_pred             HHHHHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhh
Q 018307          291 LTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYS  347 (358)
Q Consensus       291 ~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~  347 (358)
                      +.....+++.+...+-..-.+.++.+.++|+++|||+++..+++|.++++.|+.+..
T Consensus        52 ~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         52 VLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            445567889999998888889999999999999999999999999999999988754

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=97.64  E-value=0.0013  Score=55.96  Aligned_cols=127  Identities=10%  Similarity=0.021  Sum_probs=89.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHH-HHHH
Q 018307           59 LIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALSAIF-SFSV  137 (358)
Q Consensus        59 ~~~~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  137 (358)
                      .+...-..++....+..|.+-+.  -+ .-.-+..-+.+++++.+++... ...+  ...+.......+..+++. .+-+
T Consensus       151 ~~Al~AG~~Wa~YIv~G~r~g~~--~~-g~~g~a~gm~vAaviv~Pig~~-~ag~--~l~~p~ll~laLgvavlSSalPY  224 (292)
T COG5006         151 ALALGAGACWALYIVLGQRAGRA--EH-GTAGVAVGMLVAALIVLPIGAA-QAGP--ALFSPSLLPLALGVAVLSSALPY  224 (292)
T ss_pred             HHHHHHhHHHHHHHHHcchhccc--CC-CchHHHHHHHHHHHHHhhhhhh-hcch--hhcChHHHHHHHHHHHHhcccch
Confidence            33444445556666667776643  22 3455667778888888877651 1111  122233333334445554 4567


Q ss_pred             hhhhccccccchhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhh
Q 018307          138 VCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIV  191 (358)
Q Consensus       138 ~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~  191 (358)
                      .+...+++++|..++.++.+..|.+..+.++++++|++|..||.++..++.+..
T Consensus       225 sLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa  278 (292)
T COG5006         225 SLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA  278 (292)
T ss_pred             HHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence            888999999999999999999999999999999999999999999999887765

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.64  E-value=0.0018  Score=51.10  Aligned_cols=130  Identities=18%  Similarity=0.239  Sum_probs=95.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccCCCC-CHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHhhhccchHHHHHHHHHH
Q 018307          205 FLVCVGSTAGRALKSVVQGILLTSEAEKL-HSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNA  283 (358)
Q Consensus       205 ~~~~l~a~~~~a~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (358)
                      .++++++.++-+++.....++-    ++. ||+.........+++.+.......++....   ...  .. .|+ ...+|
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~----~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~---~~~--~~-p~w-~~lGG   71 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLG----KALGSPLVASFISFGVGFILLLIILLITGRPSLA---SLS--SV-PWW-AYLGG   71 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH----HHhCccHHHHHHHHHHHHHHHHHHHHHhcccccc---hhc--cC-ChH-HhccH
Confidence            5678888888888888888875    233 588888888899988888777776554211   111  11 122 23378


Q ss_pred             HHHHHHHHHHHHHHhccchhHHHHhhhh-hHHHHHHhhHh-hc---CCcccchhhhhHHHHHHHHHH
Q 018307          284 TVAYLVNLTNFLVTKHTSALTLQVLGNA-KAAVAAVVSVL-IF---RNPVTVMGMTGFAVTIMGVVL  345 (358)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~s~~~~l-~~~~~~~~~~~-~~---ge~~~~~~~~G~~lii~g~~~  345 (358)
                      +++..+..+....+.+.++......... +.+.+.+++.+ +|   .+++++.+++|.++++.|+.+
T Consensus        72 ~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   72 LLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            8888887888888999999988887777 55666777775 33   467999999999999999863

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.64  E-value=0.0017  Score=59.12  Aligned_cols=141  Identities=16%  Similarity=0.153  Sum_probs=93.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHhhhccchHHHHHHHHH
Q 018307          203 FGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGN  282 (358)
Q Consensus       203 ~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (358)
                      .+.+++-.-+++-+..++..+.+..+ ..+. |....+++...-.++..+......+.  ..+..   ....-|+..+.-
T Consensus        13 ~~~~lgQ~lsl~~~~t~~~s~~l~~~-~~~~-P~~Qs~~~Y~~l~~vy~~~~~~r~~~--~~~~~---~~~~~~w~y~ll   85 (334)
T PF06027_consen   13 IVLLLGQVLSLCITGTGTFSSLLANK-GVNI-PTFQSFFNYVLLALVYTPILLYRRGF--KKWLK---VLKRPWWKYFLL   85 (334)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHhc-CccC-cHHHHHHHHHHHHHHHhhhhhhcccc--ccchh---hcchhHHHHHHH
Confidence            44555555556666666666666421 2222 33334444443333333433332221  11111   111223333444


Q ss_pred             HHHHHHHHHHHHHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhhhc
Q 018307          283 ATVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAK  350 (358)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~~~  350 (358)
                      +++-...|+....+.++++.+.+.+......+++++++++++++++++.+++|+++++.|+.+.....
T Consensus        86 a~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD  153 (334)
T PF06027_consen   86 ALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSD  153 (334)
T ss_pred             HHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeec
Confidence            77888889999999999999999999999999999999999999999999999999999998877654

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.63  E-value=0.0011  Score=49.77  Aligned_cols=69  Identities=10%  Similarity=0.044  Sum_probs=59.5

Q ss_pred             HHHHHHHHHHHHhhhhccccccchhHHHHHhh-hHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhc
Q 018307          126 IFALSAIFSFSVVCGNTSLRYLPVSFNQAIGA-TTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLAS  194 (358)
Q Consensus       126 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~-~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~  194 (358)
                      .+...+++..++.+...+++++|.+.+..+-+ ...+.+.+.+.+++||++++.+++++.+++.|++...
T Consensus        38 ~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         38 GILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            44556677788889999999999999887765 7788889999999999999999999999999998753

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.60  E-value=0.00041  Score=52.35  Aligned_cols=70  Identities=11%  Similarity=0.150  Sum_probs=61.0

Q ss_pred             HHHHHHHHHHHhhhhccccccchhHHHHHh-hhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhccc
Q 018307          127 FALSAIFSFSVVCGNTSLRYLPVSFNQAIG-ATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNS  196 (358)
Q Consensus       127 ~~~~~~~~~~~~~~~~al~~~~~~~~~~l~-~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~  196 (358)
                      ...-+++..++.+...+++++|.+.+..+. ....+.+.+.+++++||++++.+++|+.++++|++.+...
T Consensus        34 i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~  104 (110)
T PRK09541         34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            344566778888889999999999998885 4788889999999999999999999999999999988643

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.59  E-value=0.00043  Score=51.66  Aligned_cols=71  Identities=17%  Similarity=0.105  Sum_probs=61.4

Q ss_pred             HHHHHHHHHHHHHHhhhhccccccchhHHHHHhh-hHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhc
Q 018307          124 LKIFALSAIFSFSVVCGNTSLRYLPVSFNQAIGA-TTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLAS  194 (358)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~-~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~  194 (358)
                      ...+...+++..++.+...+++++|.+.+..+-. ...+.+.+.+++++||++++.+++++.+++.|++...
T Consensus        30 ~~~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         30 TPSIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence            3344556677888899999999999999887775 8888999999999999999999999999999999875

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.54  E-value=0.00044  Score=51.07  Aligned_cols=72  Identities=15%  Similarity=0.070  Sum_probs=61.2

Q ss_pred             HHHHHHHHHHHHHHhhhhccccccchhHHHHHh-hhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhcc
Q 018307          124 LKIFALSAIFSFSVVCGNTSLRYLPVSFNQAIG-ATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASN  195 (358)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~-~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~  195 (358)
                      ...+..-+++..++.+...+++++|.+++..+- ..-.+.+.+.+++++||+.+..+++++.+.+.|++....
T Consensus        31 ~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~  103 (106)
T COG2076          31 WPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL  103 (106)
T ss_pred             chHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence            334555667788889999999999999887665 577888889999999999999999999999999997754

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=97.51  E-value=2.2e-05  Score=66.22  Aligned_cols=268  Identities=17%  Similarity=0.209  Sum_probs=172.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHH
Q 018307           53 PHIFTALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALSAI  132 (358)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  132 (358)
                      +.+.+++-++.|+..-...   ||.--     . |...+.-..+.+.++...... . ..   +..+...+..-+..+++
T Consensus         3 ~~liaL~P~l~WGsip~v~---~k~GG-----~-p~qQ~lGtT~GALifaiiv~~-~-~~---p~~T~~~~iv~~isG~~   68 (288)
T COG4975           3 DLLIALLPALGWGSIPLVA---NKFGG-----K-PYQQTLGTTLGALIFAIIVFL-F-VS---PELTLTIFIVGFISGAF   68 (288)
T ss_pred             hHHHHHHHHHHhcccceee---eecCC-----C-hhHhhhhccHHHHHHHHHHhe-e-ec---CccchhhHHHHHHhhhH
Confidence            4566677777776543221   33221     2 666665555555444444333 2 12   22445555666777888


Q ss_pred             HHHHHhhhhccccccchhHHHHHh-hhHHHHHHHHHHHHhccccchHH----HHHHHHHHHhhhhhccccc--------c
Q 018307          133 FSFSVVCGNTSLRYLPVSFNQAIG-ATTPFFTAIFAFLITCKKESAEV----YCALMPVVFGIVLASNSEP--------L  199 (358)
Q Consensus       133 ~~~~~~~~~~al~~~~~~~~~~l~-~~~p~~~~~~~~~~~~e~~~~~~----~~~~~~~~~Gv~l~~~~~~--------~  199 (358)
                      ...++..++.+.+++.+|.+.-+. .+..+-+.+++.+.++|-.+..+    ..++++.+.|+.+....|.        +
T Consensus        69 Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~~~~  148 (288)
T COG4975          69 WSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEENPS  148 (288)
T ss_pred             hhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccccccChH
Confidence            899999999999999988877554 57778888899999999766544    3567778888888775442        1


Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHhhhccchHHHHHH
Q 018307          200 FHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLL  279 (358)
Q Consensus       200 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (358)
                      +--.|+...+.|.+.|-.|-+..+..      +.|.+....-|+.-..+..+.+...-+....         +... +.-
T Consensus       149 n~kkgi~~L~iSt~GYv~yvvl~~~f------~v~g~saiLPqAiGMv~~ali~~~~~~~~~~---------~K~t-~~n  212 (288)
T COG4975         149 NLKKGIVILLISTLGYVGYVVLFQLF------DVDGLSAILPQAIGMVIGALILGFFKMEKRF---------NKYT-WLN  212 (288)
T ss_pred             hhhhheeeeeeeccceeeeEeeeccc------cccchhhhhHHHHHHHHHHHHHhhcccccch---------HHHH-HHH
Confidence            12468888889999999999988775      2344444444333221111112221111111         1222 223


Q ss_pred             HHHHHHHHHHHHHHHHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchh----hhhHHHHHHHHHHhhhhc
Q 018307          280 LGNATVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMG----MTGFAVTIMGVVLYSEAK  350 (358)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~----~~G~~lii~g~~~~~~~~  350 (358)
                      +..|+.....|+..+.+.++.+-.+.=.++.+.-+.+.+-|.++++|+-|..+    ++|.+++++|..+....|
T Consensus       213 ii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg~~K  287 (288)
T COG4975         213 IIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLGIAK  287 (288)
T ss_pred             HhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhheec
Confidence            44566666677777777788887777777778889999999999999988764    578888888877655443

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=97.45  E-value=0.0027  Score=55.60  Aligned_cols=105  Identities=9%  Similarity=0.009  Sum_probs=72.7

Q ss_pred             HHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHhhhhccccccc
Q 018307           69 IGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALSAIFSFSVVCGNTSLRYLP  148 (358)
Q Consensus        69 ~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~  148 (358)
                      .......|+.-    .+ |+....-|.....+-..++..+.    +++..+|..++. +..++.+..++.+...+.+...
T Consensus       151 ~~Y~~~~~~~~----~~-~~~~~lPqaiGm~i~a~i~~~~~----~~~~~~k~~~~n-il~G~~w~ignl~~~is~~~~G  220 (269)
T PF06800_consen  151 WIYSVIPKAFH----VS-GWSAFLPQAIGMLIGAFIFNLFS----KKPFFEKKSWKN-ILTGLIWGIGNLFYLISAQKNG  220 (269)
T ss_pred             HHHHHHHHhcC----CC-hhHhHHHHHHHHHHHHHHHhhcc----cccccccchHHh-hHHHHHHHHHHHHHHHhHHhcc
Confidence            33344455522    33 66666666544433333333312    222234545554 5678999999999999999999


Q ss_pred             hhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHH
Q 018307          149 VSFNQAIGATTPFFTAIFAFLITCKKESAEVYCAL  183 (358)
Q Consensus       149 ~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~  183 (358)
                      .+++..+.++.++...+.+.+++||+-+++++...
T Consensus       221 ~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~  255 (269)
T PF06800_consen  221 VATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYT  255 (269)
T ss_pred             chhhhhHHhHHHHHHHhhhheEEEecCchhhHHHH
Confidence            99999999999999999999999999888876543

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.43  E-value=0.0047  Score=47.28  Aligned_cols=59  Identities=17%  Similarity=0.350  Sum_probs=46.7

Q ss_pred             HHHHhccchh-HHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhhhccc
Q 018307          294 FLVTKHTSAL-TLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKR  352 (358)
Q Consensus       294 ~~~~~~~~~~-~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~~~~~  352 (358)
                      ..++++.+.. .+++..-+..+.+.++|+++|||++|+.+++|+.+++.|+...+...++
T Consensus        48 s~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~~  107 (120)
T PRK10452         48 SFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTRK  107 (120)
T ss_pred             HHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCCC
Confidence            3445655543 3455566788999999999999999999999999999999988765543

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.41  E-value=0.0038  Score=47.08  Aligned_cols=57  Identities=9%  Similarity=0.109  Sum_probs=46.3

Q ss_pred             HHHHhccchh-HHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhhhc
Q 018307          294 FLVTKHTSAL-TLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAK  350 (358)
Q Consensus       294 ~~~~~~~~~~-~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~~~  350 (358)
                      ..++++.+.. .+++..-+..+.+.++|+++|||++++.+++|+.+++.|+...+...
T Consensus        48 ~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~  105 (110)
T PRK09541         48 AQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS  105 (110)
T ss_pred             HHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            3446666543 44555667889999999999999999999999999999999987654

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=97.34  E-value=0.0014  Score=57.30  Aligned_cols=79  Identities=22%  Similarity=0.210  Sum_probs=70.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhhhccc
Q 018307          274 FVLFLLLGNATVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKR  352 (358)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~~~~~  352 (358)
                      ........-+++....|...+..+++.+|.++.+....|.+++.++++++++++++..||++..+...|+.+.......
T Consensus        15 ~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~   93 (244)
T PF04142_consen   15 KDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ   93 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence            3345566777778888888999999999999999999999999999999999999999999999999999988766544

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.31  E-value=0.011  Score=44.37  Aligned_cols=53  Identities=15%  Similarity=0.287  Sum_probs=44.2

Q ss_pred             HHHhccch-hHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhh
Q 018307          295 LVTKHTSA-LTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYS  347 (358)
Q Consensus       295 ~~~~~~~~-~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~  347 (358)
                      .++++.+. +.+++..-+..+.+.+.|+++|||++++.+++|+++++.|+...+
T Consensus        54 ~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         54 QAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            34555554 456777788889999999999999999999999999999998753

>PRK13499 rhamnose-proton symporter; Provisional

Probab=97.22  E-value=0.0097  Score=54.27  Aligned_cols=139  Identities=14%  Similarity=0.028  Sum_probs=91.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHH--HHHHHH-HhcchhHHHHHhhhccchHHHH
Q 018307          201 HLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALI--LLPFTL-YIEGNVAATTIEKASEDRFVLF  277 (358)
Q Consensus       201 ~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~-~~~~~~~~~~~~~~~~~~~~~~  277 (358)
                      ...|+++++++++|++-+.+-+|+.      +.-++|.. |. ..+.+.  +.|+.. ....+...+  .....+...+.
T Consensus         5 ~~~G~~~~~i~~~~~GS~~~p~K~~------k~w~wE~~-W~-v~gi~~wl~~~~~~g~~~~~~f~~--~~~~~~~~~~~   74 (345)
T PRK13499          5 IILGIIWHLIGGASSGSFYAPFKKV------KKWSWETM-WS-VGGIFSWLILPWLIAALLLPDFWA--YYSSFSGSTLL   74 (345)
T ss_pred             hHHHHHHHHHHHHHhhccccccccc------CCCchhHH-HH-HHHHHHHHHHHHHHHHHHhhhHHH--HHHhcCHHHHH
Confidence            4579999999999999999988873      22355555 43 222211  122111 111111111  12224566777


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccchhHHHHh-hhhhHHHHHHhhHhhcCCcc---c----chhhhhHHHHHHHHHHhhhh
Q 018307          278 LLLGNATVAYLVNLTNFLVTKHTSALTLQVL-GNAKAAVAAVVSVLIFRNPV---T----VMGMTGFAVTIMGVVLYSEA  349 (358)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~-~~l~~~~~~~~~~~~~ge~~---~----~~~~~G~~lii~g~~~~~~~  349 (358)
                      ..+.+|++--..|...+..+++.+....-.+ .-+..+.+.+++.+++||-.   +    ....+|.+++++|+.+..+.
T Consensus        75 ~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~A  154 (345)
T PRK13499         75 PVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRA  154 (345)
T ss_pred             HHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence            7888888888888888888888886655444 44578889999999998643   2    34788999999999998873

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.11  E-value=0.014  Score=43.24  Aligned_cols=55  Identities=20%  Similarity=0.348  Sum_probs=46.4

Q ss_pred             HHHhccch-hHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhhh
Q 018307          295 LVTKHTSA-LTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEA  349 (358)
Q Consensus       295 ~~~~~~~~-~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~~  349 (358)
                      ..+|+.+- +.+++.+-+-.+.+.+.|+++|||++++.+++|..+++.|+...+..
T Consensus        49 ~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~  104 (106)
T COG2076          49 LALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG  104 (106)
T ss_pred             HHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence            34566553 45678888899999999999999999999999999999999887654

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.07  E-value=0.029  Score=44.28  Aligned_cols=121  Identities=10%  Similarity=0.048  Sum_probs=83.4

Q ss_pred             HHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHhhhhcccccc
Q 018307           68 NIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALSAIFSFSVVCGNTSLRYL  147 (358)
Q Consensus        68 ~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~  147 (358)
                      ......+|-.+-+.  ...|+.-+++.+..+.+.+.++..+.++.+.+. ..+.+|+ ....+++......+..+....+
T Consensus        13 i~~q~~~N~~L~~~--~gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~-~~~~p~w-~~lGG~lG~~~V~~~~~~vp~l   88 (138)
T PF04657_consen   13 IALQAAFNGQLGKA--LGSPLVASFISFGVGFILLLIILLITGRPSLAS-LSSVPWW-AYLGGLLGVFFVLSNIILVPRL   88 (138)
T ss_pred             HHHHHHHHHHHHHH--hCccHHHHHHHHHHHHHHHHHHHHHhcccccch-hccCChH-HhccHHHHHHHHHHHHHHhhhh
Confidence            33334445555444  334999999999999999888777555432211 2222333 3447888888888999999999


Q ss_pred             chhHHHHHhh-hHHHHHHHHHHH----HhccccchHHHHHHHHHHHhhhh
Q 018307          148 PVSFNQAIGA-TTPFFTAIFAFL----ITCKKESAEVYCALMPVVFGIVL  192 (358)
Q Consensus       148 ~~~~~~~l~~-~~p~~~~~~~~~----~~~e~~~~~~~~~~~~~~~Gv~l  192 (358)
                      +++....+.- -+.+..+++..+    .-|++++..|.+|+.++++|+.+
T Consensus        89 G~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   89 GAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            9888776664 455555556653    23678999999999999999864

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=97.00  E-value=0.054  Score=48.83  Aligned_cols=144  Identities=17%  Similarity=0.143  Sum_probs=96.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhcch---hH-HHHHhhhccchHHHHHHH
Q 018307          205 FLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGN---VA-ATTIEKASEDRFVLFLLL  280 (358)
Q Consensus       205 ~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~  280 (358)
                      .+..+...+-.+......|...++++.+..|....+..-+.-.++........+..   .. .+........+.....+.
T Consensus        17 ~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~   96 (345)
T KOG2234|consen   17 YLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVS   96 (345)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHH
Confidence            33344444455555555555543334456677777777666665555444432211   11 111111111222344455


Q ss_pred             HHHHHHHHHHHHHHHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhh
Q 018307          281 GNATVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSE  348 (358)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~  348 (358)
                      .-+++..+-|...+..+.+.+|.++++...++...+.+++.++++++++..||...++...|+.+...
T Consensus        97 vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~  164 (345)
T KOG2234|consen   97 VPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQL  164 (345)
T ss_pred             HHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhc
Confidence            55666667777788899999999999999999999999999999999999999999999999998873

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.95  E-value=0.027  Score=42.07  Aligned_cols=53  Identities=13%  Similarity=0.206  Sum_probs=45.0

Q ss_pred             HHhccc-hhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhh
Q 018307          296 VTKHTS-ALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSE  348 (358)
Q Consensus       296 ~~~~~~-~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~  348 (358)
                      ++++.+ .+.+++..-+..+.+.+.|+++|||++++.+++|+.+++.|+...+.
T Consensus        49 al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l  102 (105)
T PRK11431         49 AMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL  102 (105)
T ss_pred             HHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence            455555 35567888889999999999999999999999999999999988643

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.91  E-value=0.0026  Score=46.56  Aligned_cols=59  Identities=12%  Similarity=0.063  Sum_probs=36.3

Q ss_pred             HHHHHHHHHHhhhhccccccchhHHHHHh-hhHHHHHHHHHHHHhccccchHHHHHHHHH
Q 018307          128 ALSAIFSFSVVCGNTSLRYLPVSFNQAIG-ATTPFFTAIFAFLITCKKESAEVYCALMPV  186 (358)
Q Consensus       128 ~~~~~~~~~~~~~~~al~~~~~~~~~~l~-~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~  186 (358)
                      ....++..+..+...+++++|.+.+..+. ....+.+.+.+.+++||+++..++.++.++
T Consensus        34 ~~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   34 LAVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            33447788889999999999999987665 599999999999999999999999998764

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=96.85  E-value=0.0086  Score=53.97  Aligned_cols=121  Identities=19%  Similarity=0.129  Sum_probs=81.6

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHhhhccchHHHHHH
Q 018307          200 FHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLL  279 (358)
Q Consensus       200 ~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (358)
                      +...|..+++.++++.+....++|+-..+.+++  ...--  ..        +....               ....|+.-
T Consensus         4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~--~~~~~--~~--------~~~~l---------------~~~~W~~G   56 (300)
T PF05653_consen    4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRG--SLRAG--SG--------GRSYL---------------RRPLWWIG   56 (300)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc--ccccc--ch--------hhHHH---------------hhHHHHHH
Confidence            456899999999999999999999975322210  00000  00        00000               01112221


Q ss_pred             HHHHHHHHHHHHHHHHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhhhc
Q 018307          280 LGNATVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAK  350 (358)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~~~  350 (358)
                      ......+.   ...+.++...++..++.++.+..+++.+++..++||+++...++|.++++.|..+.....
T Consensus        57 ~~~~~~g~---~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~  124 (300)
T PF05653_consen   57 LLLMVLGE---ILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFA  124 (300)
T ss_pred             HHHHhcch---HHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeC
Confidence            12222233   233456788999999999999999999999999999999999999999999988765443

>TIGR00803 nst UDP-galactose transporter

Probab=96.84  E-value=0.018  Score=49.55  Aligned_cols=67  Identities=13%  Similarity=0.178  Sum_probs=59.7

Q ss_pred             HHHHHHHHHHHHhhhhccccccchhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhh
Q 018307          126 IFALSAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVL  192 (358)
Q Consensus       126 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l  192 (358)
                      .....+..+.+..+..+.++|.+..+..+...+.++++.+++.++++|+++..+|.|..+++.|+.+
T Consensus       155 ~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       155 VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            3344566677888899999999999999999999999999999999999999999999999988754

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=96.83  E-value=0.044  Score=43.43  Aligned_cols=137  Identities=14%  Similarity=0.148  Sum_probs=89.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHhhhccchHHHHHHHH
Q 018307          202 LFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLG  281 (358)
Q Consensus       202 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (358)
                      ....++++++.++-..+....-++.   +.--+|..-.......+++.+.......++......  .   ....|+.. .
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~---~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~--~---~~~pwW~~-~   74 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLA---RYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAA--V---ASAPWWAW-I   74 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHH---HHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhh--c---cCCchHHH-H
Confidence            4567788888888888888888875   222257777777778888777766666544322221  1   11122322 3


Q ss_pred             HHHHHHHHHHHHHHHHhccchhHHHHhhhh-hHHHHHHhhHhhc-C---CcccchhhhhHHHHHHHHHHhh
Q 018307          282 NATVAYLVNLTNFLVTKHTSALTLQVLGNA-KAAVAAVVSVLIF-R---NPVTVMGMTGFAVTIMGVVLYS  347 (358)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l-~~~~~~~~~~~~~-g---e~~~~~~~~G~~lii~g~~~~~  347 (358)
                      +|+++..+-........+.++++...+... +.+.+.+++-+=+ |   .+++...++|+++++.|+++..
T Consensus        75 GG~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~  145 (150)
T COG3238          75 GGLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR  145 (150)
T ss_pred             ccchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence            446666665666667788887776665554 5566666665433 3   4689999999999999965544

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=96.65  E-value=0.0051  Score=55.36  Aligned_cols=140  Identities=11%  Similarity=0.019  Sum_probs=105.1

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHh--hcCCCchHHHHHHHHHHHHHHHH-HHHHHhhccccc----ccccHHHHHHH
Q 018307           54 HIFTALIIASWYLSNIGVLLLNKYLLS--FYGYRYPIFLTMLHMISCAVYSY-VAIHFLELVPIQ----HILSRKQFLKI  126 (358)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~~~~~K~~~~--~~~~~~p~~l~~~r~~~~~~~l~-~~~~~~~~~~~~----~~~~~~~~~~~  126 (358)
                      .....+....+.+.+..-.++.|.++.  +++.+ ++.+...+.-.+.+.+. ++.... ..+..    ...+.-.....
T Consensus       161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~-~~~~~~~~~~~~~~~~~~~~  238 (316)
T KOG1441|consen  161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLN-SMNLLYYTAPISLIFLLIPFLDYV-EGNKFVGFLTAPWFVTFLIL  238 (316)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccC-chHHHHHhhhHHHHHHhcchHhhh-cccceeeeeccccchhhHHH
Confidence            456667777777888888888888884  45566 88888888777777777 554421 11111    10222224444


Q ss_pred             HHHHHHHHHHHhhhhccccccchhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhcc
Q 018307          127 FALSAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASN  195 (358)
Q Consensus       127 ~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~  195 (358)
                      ...+++....+...+..+..+++=++++.....=+++.+.++++++++.++.+.+|.++.++|+.+...
T Consensus       239 ~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~  307 (316)
T KOG1441|consen  239 LLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSR  307 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHH
Confidence            555566677788889999999999999999999999999999999999999999999999999998763

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=96.56  E-value=0.004  Score=46.86  Aligned_cols=65  Identities=17%  Similarity=0.121  Sum_probs=56.2

Q ss_pred             HHHHHHHHHhhhhccccccchhHHHHH-hhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhh
Q 018307          129 LSAIFSFSVVCGNTSLRYLPVSFNQAI-GATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLA  193 (358)
Q Consensus       129 ~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~  193 (358)
                      .=+++-.+.+.+++.+...|.|.+.-+ ++++-+||.+.++++.+|..++++++|+.+++.|+.+.
T Consensus        47 pf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   47 PFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            345667788888999999999988877 59999999999988888888999999999999998764

Many members are annotated as potential transmembrane proteins.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=96.18  E-value=0.0019  Score=55.46  Aligned_cols=134  Identities=19%  Similarity=0.186  Sum_probs=89.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHhhhccchHHHHHHHH
Q 018307          202 LFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLG  281 (358)
Q Consensus       202 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (358)
                      ..|..+..++ ..+-...+..++..     ..+|.++--.-.+.-.+...|..++...+...    +  ....  ..+++
T Consensus        37 ~~gl~l~~vs-~ff~~~~vv~t~~~-----e~~p~e~a~~r~l~~mlit~pcliy~~~~v~g----p--~g~R--~~LiL  102 (346)
T KOG4510|consen   37 NLGLLLLTVS-YFFNSCMVVSTKVL-----ENDPMELASFRLLVRMLITYPCLIYYMQPVIG----P--EGKR--KWLIL  102 (346)
T ss_pred             ccCceehhhH-HHHhhHHHhhhhhh-----ccChhHhhhhhhhhehhhhheEEEEEeeeeec----C--CCcE--EEEEe
Confidence            4577777777 66667777777664     23555554444333333333333332221100    0  0111  11234


Q ss_pred             HHHHHHHHHHHHHHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhhh
Q 018307          282 NATVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEA  349 (358)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~~  349 (358)
                      =|+.++..-+..+++.++.+-..+.++....|+++++++|++++|++|....+|..+.+.|+.+..+.
T Consensus       103 Rg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRP  170 (346)
T KOG4510|consen  103 RGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRP  170 (346)
T ss_pred             ehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecC
Confidence            45566655566778889999999999999999999999999999999999999999999999988764

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=96.14  E-value=0.15  Score=44.93  Aligned_cols=139  Identities=11%  Similarity=0.021  Sum_probs=100.4

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhhcccc-c--ccccHHHHHHHHHHH
Q 018307           54 HIFTALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPI-Q--HILSRKQFLKIFALS  130 (358)
Q Consensus        54 ~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~  130 (358)
                      ....+.++..+.+.=.......+.++..++.. ++.+.+.-.+...+.-.......+.... .  -....+.++.++..+
T Consensus       170 s~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s-~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s  248 (327)
T KOG1581|consen  170 SPIGILLLFGYLLFDGFTNATQDSLFKKYKVS-SLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYS  248 (327)
T ss_pred             chHhHHHHHHHHHHHhhHHhHHHHHhccCCcc-HhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHH
Confidence            45666666666665555555667777776666 6655555555454444433321111110 0  013567788999999


Q ss_pred             HHHHHHHhhhhccccccchhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhh
Q 018307          131 AIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLA  193 (358)
Q Consensus       131 ~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~  193 (358)
                      ++.++++.+.++-++.-.+=+.+.+..+-=++.++++.+.++.+.++.+|.|+.+.+.|..+=
T Consensus       249 ~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~  311 (327)
T KOG1581|consen  249 TCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLE  311 (327)
T ss_pred             HhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHH
Confidence            999999999999999888888888999999999999999999999999999999999887643

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=95.71  E-value=0.0087  Score=50.90  Aligned_cols=136  Identities=10%  Similarity=0.117  Sum_probs=88.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHhhhccchHHHHHHHHHH
Q 018307          204 GFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNA  283 (358)
Q Consensus       204 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (358)
                      .++++++=++.|+.--....|.      +-+|.+...-..+-+.++.+....+.. |         ..+...+..-+.+|
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~------GG~p~qQ~lGtT~GALifaiiv~~~~~-p---------~~T~~~~iv~~isG   66 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKF------GGKPYQQTLGTTLGALIFAIIVFLFVS-P---------ELTLTIFIVGFISG   66 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeec------CCChhHhhhhccHHHHHHHHHHheeec-C---------ccchhhHHHHHHhh
Confidence            4677788888888665554443      334555554444434333333333321 1         12455566667777


Q ss_pred             HHHHHHHHHHHHHHhccchhHHHHhhhh-hHHHHHHhhHhhcCCcccchh----hhhHHHHHHHHHHhhhhcccccc
Q 018307          284 TVAYLVNLTNFLVTKHTSALTLQVLGNA-KAAVAAVVSVLIFRNPVTVMG----MTGFAVTIMGVVLYSEAKKRSKV  355 (358)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~s~~~~l-~~~~~~~~~~~~~ge~~~~~~----~~G~~lii~g~~~~~~~~~~~~~  355 (358)
                      +.-.+.+...+.+.+..+...+...++- +.+-+.+++++.|||-.++.+    .+..++++.|+++-.+.++.+|+
T Consensus        67 ~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~  143 (288)
T COG4975          67 AFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKE  143 (288)
T ss_pred             hHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecccccc
Confidence            7777777778888888877777666554 677889999999999988764    34668889999888877664333

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=95.54  E-value=0.023  Score=51.37  Aligned_cols=81  Identities=17%  Similarity=0.187  Sum_probs=72.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhhhcccc
Q 018307          274 FVLFLLLGNATVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKRS  353 (358)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~~~~~~  353 (358)
                      .....-+.-|.+-+..|+....+++.++....+++....-.++..++.++-+|++|+.+.++..+.++|+++.+..+.++
T Consensus       157 ~~ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~  236 (416)
T KOG2765|consen  157 QTAKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ  236 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence            44555666788889999999999999999999999999999999999999999999999999999999999998876654


Q ss_pred             c
Q 018307          354 K  354 (358)
Q Consensus       354 ~  354 (358)
                      +
T Consensus       237 ~  237 (416)
T KOG2765|consen  237 N  237 (416)
T ss_pred             c
Confidence            3

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=95.40  E-value=0.15  Score=37.23  Aligned_cols=47  Identities=15%  Similarity=0.147  Sum_probs=25.8

Q ss_pred             HHHHHhccchhHH-HHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHH
Q 018307          293 NFLVTKHTSALTL-QVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVT  339 (358)
Q Consensus       293 ~~~~~~~~~~~~~-s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~li  339 (358)
                      ...++++.+...+ .+..-+..+...+.|.++|||++|+.+++|+.++
T Consensus        46 l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   46 LSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            4446777666554 6666788899999999999999999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.38  E-value=1.1  Score=35.68  Aligned_cols=126  Identities=11%  Similarity=0.050  Sum_probs=76.3

Q ss_pred             HHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHhhhhcccc
Q 018307           66 LSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALSAIFSFSVVCGNTSLR  145 (358)
Q Consensus        66 ~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~  145 (358)
                      .......-.|-.+-+.  .+.|..-.+.-+.++.+++..+..+....+......+..|+. ...+++.............
T Consensus        15 ~~l~~Q~~iN~qL~~~--~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~-~~GG~lGa~~vt~s~~l~p   91 (150)
T COG3238          15 ALLPLQAAINGRLARY--LGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWA-WIGGLLGAIFVTSSILLAP   91 (150)
T ss_pred             hhhhhHHHHHHHHHHH--cCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHH-HHccchhhhhhhhhHHhcc
Confidence            3333334445555444  445999999999999888887777533222222223334443 4445655555555555666


Q ss_pred             ccchhHHHHH-hhhHHHHHHHHHHHH-h---ccccchHHHHHHHHHHHhhhhhc
Q 018307          146 YLPVSFNQAI-GATTPFFTAIFAFLI-T---CKKESAEVYCALMPVVFGIVLAS  194 (358)
Q Consensus       146 ~~~~~~~~~l-~~~~p~~~~~~~~~~-~---~e~~~~~~~~~~~~~~~Gv~l~~  194 (358)
                      .+.++..+.+ .+-+.+..+++..+= +   +++++..+++++++.++|+.+..
T Consensus        92 ~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~  145 (150)
T COG3238          92 RLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR  145 (150)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence            6666555544 455555555555332 2   46789999999999999955543

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=95.25  E-value=0.039  Score=48.14  Aligned_cols=131  Identities=12%  Similarity=0.097  Sum_probs=82.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHhhhccchHHHHHHHHHH
Q 018307          204 GFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLGNA  283 (358)
Q Consensus       204 G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (358)
                      |++.+++|+++++-..+=.||.     ...|+.-.+.++.....+.........+.+             ..+.+..++|
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~-----~~gDg~~fQw~~~~~i~~~g~~v~~~~~~p-------------~f~p~amlgG   62 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKF-----DTGDGFFFQWVMCSGIFLVGLVVNLILGFP-------------PFYPWAMLGG   62 (254)
T ss_pred             CchhHHHHHHHhcccceeeEec-----cCCCcHHHHHHHHHHHHHHHHHHHHhcCCC-------------cceeHHHhhh
Confidence            5678899999999888888876     344677666666655554444444433322             2233344555


Q ss_pred             HHHHHHHHHHHHHHhccch-hHHHHhhhhhHHHHHHhhHh-hcCCc-----ccchhhhhHHHHHHHHHHhhhhccc
Q 018307          284 TVAYLVNLTNFLVTKHTSA-LTLQVLGNAKAAVAAVVSVL-IFRNP-----VTVMGMTGFAVTIMGVVLYSEAKKR  352 (358)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~-~~~s~~~~l~~~~~~~~~~~-~~ge~-----~~~~~~~G~~lii~g~~~~~~~~~~  352 (358)
                      .+-...|....-.++..+- ....+-+..+-+.+...|-+ +||++     -.+..++|++++++|..+|..-|.+
T Consensus        63 ~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~  138 (254)
T PF07857_consen   63 ALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSE  138 (254)
T ss_pred             hhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCC
Confidence            5555555555555555552 33344555566667776654 66653     3567999999999999999865543

The region concerned is approximately 280 residues long.

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=94.89  E-value=0.058  Score=45.64  Aligned_cols=132  Identities=9%  Similarity=0.058  Sum_probs=83.7

Q ss_pred             HHHHHHHHHHHHHHhhcccCCCCC---------HHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHhhhccchHHHHHHHH
Q 018307          211 STAGRALKSVVQGILLTSEAEKLH---------SMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFLLLG  281 (358)
Q Consensus       211 a~~~~a~~~v~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (358)
                      --+||=.|.+.++|+.+.+ ++.+         ...+.+.+.....++.=+...+.+.        ...++...+.+..+
T Consensus        21 ifvCYF~yGI~QEkitrGk-Yg~~g~~~E~FTfalaLVf~qC~~N~vfAkvl~~ir~~--------~~~D~t~~~~YaAc   91 (337)
T KOG1580|consen   21 IFVCYFVYGIQQEKITRGK-YGLPGESIEKFTFALALVFFQCTANTVFAKVLFLIRKK--------TEIDNTPTKMYAAC   91 (337)
T ss_pred             hhheehhhhhHHHHhhccc-cCCCCcchheehHHHHHHHHHHHHHHHHHHhheeeccc--------ccccCCcchHHHHH
Confidence            3468889999999997422 2211         2233444444443332222122111        11112233333332


Q ss_pred             HHHHHHHHHHHHHHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhhhccc
Q 018307          282 NATVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKR  352 (358)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~~~~~  352 (358)
                      + +...+...+.+.+++..+--+.-+..+.+|+-.+++|+++.+.+.++..+.-...+++|+.++.+.++|
T Consensus        92 s-~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~K  161 (337)
T KOG1580|consen   92 S-ASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENK  161 (337)
T ss_pred             H-HHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccc
Confidence            2 222223345677888888778888889999999999999999999999999999999999999887555

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=93.91  E-value=0.45  Score=42.41  Aligned_cols=138  Identities=11%  Similarity=-0.026  Sum_probs=95.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhhccc-----ccccccHHHHHHHHHHHH
Q 018307           57 TALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVP-----IQHILSRKQFLKIFALSA  131 (358)
Q Consensus        57 ~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~  131 (358)
                      ...++...........+..|...+.-+++ -+-+.++..+.+...+.....+.+..+     .+.......+-.+...++
T Consensus       158 gY~w~~~n~~~~a~~~v~~kk~vd~~~l~-~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv  236 (314)
T KOG1444|consen  158 GYSWALANCLTTAAFVVYVKKSVDSANLN-KFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCV  236 (314)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcccccc-ceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHH
Confidence            34555555556666666677777654555 566777777777777766665554422     111122223444455555


Q ss_pred             HHHHHHhhhhccccccchhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhcc
Q 018307          132 IFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASN  195 (358)
Q Consensus       132 ~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~  195 (358)
                      +...-.++..++.+..++.+.++...-.-..+.+...++.+++.++...+|+.++++|-++...
T Consensus       237 ~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~  300 (314)
T KOG1444|consen  237 MGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSY  300 (314)
T ss_pred             HHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhh
Confidence            5566688889999999999999999777777777777788889999999999999998887763

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=93.43  E-value=2.8  Score=35.57  Aligned_cols=108  Identities=8%  Similarity=-0.019  Sum_probs=79.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHhhccccc---ccccHHHHHHHHHHHHHHHHHHhhhhccccccchhHHHHHhhhHHHHH
Q 018307           87 PIFLTMLHMISCAVYSYVAIHFLELVPIQ---HILSRKQFLKIFALSAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFT  163 (358)
Q Consensus        87 p~~l~~~r~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~  163 (358)
                      -.--.++.-+.+..++..+-.+.......   .-...+....++..|++...-.++.-++++-++.++++++-++.-...
T Consensus       185 d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~  264 (309)
T COG5070         185 DFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPI  264 (309)
T ss_pred             hhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChH
Confidence            45556677777766666665544333221   111233445667777888888899999999999999999999999999


Q ss_pred             HHHHHHHhccccchHHHHHHHHHHHhhhhhc
Q 018307          164 AIFAFLITCKKESAEVYCALMPVVFGIVLAS  194 (358)
Q Consensus       164 ~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~  194 (358)
                      .+.+.++++|+.++.++.++.++++..++..
T Consensus       265 alaGlvffdap~nf~si~sillGflsg~iYa  295 (309)
T COG5070         265 ALAGLVFFDAPVNFLSIFSILLGFLSGAIYA  295 (309)
T ss_pred             HHhhhhhcCCchhHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999888888776655443

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=92.90  E-value=4.6  Score=36.67  Aligned_cols=141  Identities=13%  Similarity=0.074  Sum_probs=73.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHH-HHHHHHHHHHHHHH-HHhcchhHHHHHhhhccchHHHHHH
Q 018307          202 LFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLL-YMAPMSALILLPFT-LYIEGNVAATTIEKASEDRFVLFLL  279 (358)
Q Consensus       202 ~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  279 (358)
                      ..|+++-.+++++.+.+.+=.||.     ++ =++|... .+.+++-++ +|.. ....-|+..+....  .+...+...
T Consensus         6 i~Gii~h~iGg~~~~sfy~P~kkv-----k~-WsWEs~Wlv~gi~swli-~P~~~a~l~ip~~~~i~~~--~~~~~l~~~   76 (344)
T PF06379_consen    6 ILGIIFHAIGGFASGSFYVPFKKV-----KG-WSWESYWLVQGIFSWLI-VPWLWALLAIPDFFSIYSA--TPASTLFWT   76 (344)
T ss_pred             HHHHHHHHHHHHHhhhhccchhhc-----CC-ccHHHHHHHHHHHHHHH-HHHHHHHHhCCcHHHHHHh--CChhHHHHH
Confidence            579999999999999999888876     22 3455443 333444333 3332 23334444333222  122233333


Q ss_pred             HHHHHHHHHHHHHHHHHHhccchh-HHHHhhhhhHHHHHHhhHhhcC-------CcccchhhhhHHHHHHHHHHhhhhcc
Q 018307          280 LGNATVAYLVNLTNFLVTKHTSAL-TLQVLGNAKAAVAAVVSVLIFR-------NPVTVMGMTGFAVTIMGVVLYSEAKK  351 (358)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~l~~~~~~~~~~~~~g-------e~~~~~~~~G~~lii~g~~~~~~~~~  351 (358)
                      .+.+++--+..+..-..+++.+-. ..++.--+..++..++--++.|       ++-....++|.+++++|+.+..+...
T Consensus        77 ~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~  156 (344)
T PF06379_consen   77 FLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGS  156 (344)
T ss_pred             HHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHH
Confidence            333443222222222344554422 2222222333334444333332       33345689999999999999887643

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=92.64  E-value=0.079  Score=43.60  Aligned_cols=64  Identities=17%  Similarity=0.213  Sum_probs=56.4

Q ss_pred             HHHHHHHHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhhhcc
Q 018307          288 LVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKK  351 (358)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~~~~  351 (358)
                      ..|+.+..++++.+|+.++.....+..+..+++++++||++...+++..++.+.|+.+..+.++
T Consensus        65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN  128 (290)
T KOG4314|consen   65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN  128 (290)
T ss_pred             cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc
Confidence            3456666789999999999999999999999999999999999999999999999888776543

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=91.60  E-value=0.41  Score=36.16  Aligned_cols=52  Identities=17%  Similarity=0.206  Sum_probs=40.7

Q ss_pred             HHHHhccchhHHHHh-hhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHH
Q 018307          294 FLVTKHTSALTLQVL-GNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVL  345 (358)
Q Consensus       294 ~~~~~~~~~~~~s~~-~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~  345 (358)
                      +..+++.+-+.+..+ +.+.-+++.+.++++..|..+...++|+++++.|+.+
T Consensus        59 ~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   59 FLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL  111 (113)
T ss_pred             HHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence            445666665555554 6888899999998887778888999999999999754

Many members are annotated as potential transmembrane proteins.

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=85.98  E-value=0.31  Score=43.45  Aligned_cols=126  Identities=12%  Similarity=0.191  Sum_probs=83.6

Q ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHhhhccchHHHHH
Q 018307          199 LFHLFGFLVCVGSTAGRALKSVVQGILLTSEAEKLHSMNLLLYMAPMSALILLPFTLYIEGNVAATTIEKASEDRFVLFL  278 (358)
Q Consensus       199 ~~~~~G~~~~l~a~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (358)
                      .++..|..+++.+++..+...++.|+...+...    ...                -..+++.  ...     ..+.|+.
T Consensus        17 ~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~----~~~----------------ra~~gg~--~yl-----~~~~Ww~   69 (335)
T KOG2922|consen   17 SDNIIGLVLAISSSIFIGSSFILKKKGLKRAGA----SGL----------------RAGEGGY--GYL-----KEPLWWA   69 (335)
T ss_pred             cCceeeeeehhhccEEEeeehhhhHHHHHHHhh----hcc----------------cccCCCc--chh-----hhHHHHH
Confidence            445679999999999999888888876521110    000                0001100  000     1123444


Q ss_pred             HHHHHHHHHHHHHHHHHHHhccchhHHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhhhccccc
Q 018307          279 LLGNATVAYLVNLTNFLVTKHTSALTLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAKKRSK  354 (358)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~~~~~~~  354 (358)
                      -+..-..|=..|++   +....+++-++..+.+..+.+.+++.++++|+++....+|.++.++|..+......+++
T Consensus        70 G~ltm~vGei~NFa---AYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~  142 (335)
T KOG2922|consen   70 GMLTMIVGEIANFA---AYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQ  142 (335)
T ss_pred             HHHHHHHHhHhhHH---HHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCccc
Confidence            33334444444433   45778888889999999999999999999999999999999999999887765544443

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=85.04  E-value=25  Score=30.90  Aligned_cols=101  Identities=10%  Similarity=0.057  Sum_probs=69.8

Q ss_pred             chHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHhhhhccccccchhHHHHHhhhHHHHHHH
Q 018307           86 YPIFLTMLHMISCAVYSYVAIHFLELVPIQHILSRKQFLKIFALSAIFSFSVVCGNTSLRYLPVSFNQAIGATTPFFTAI  165 (358)
Q Consensus        86 ~p~~l~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~l~~~~p~~~~~  165 (358)
                      ++++.-++......+..++.....+ .+       .......+.|.+.+.++.+..-.++.+..+...++-++.-+.+--
T Consensus        26 Dg~~fQw~~~~~i~~~g~~v~~~~~-~p-------~f~p~amlgG~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw   97 (254)
T PF07857_consen   26 DGFFFQWVMCSGIFLVGLVVNLILG-FP-------PFYPWAMLGGALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGW   97 (254)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHhcC-CC-------cceeHHHhhhhhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHH
Confidence            3777777777666666555554221 11       122334566788899999999999999999999999886665544


Q ss_pred             HH-HH-Hhc---c--ccchHHHHHHHHHHHhhhhhc
Q 018307          166 FA-FL-ITC---K--KESAEVYCALMPVVFGIVLAS  194 (358)
Q Consensus       166 ~~-~~-~~~---e--~~~~~~~~~~~~~~~Gv~l~~  194 (358)
                      .. .+ +++   |  +-++..++|++++++|..+..
T Consensus        98 ~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~  133 (254)
T PF07857_consen   98 ASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFS  133 (254)
T ss_pred             HHhhceeccccccccchhHHHHHHHHHHHHHHHhee
Confidence            33 22 333   2  236788999999999988775

The region concerned is approximately 280 residues long.

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=84.63  E-value=16  Score=32.18  Aligned_cols=139  Identities=8%  Similarity=-0.083  Sum_probs=82.8

Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHH-------HhhcccccccccHHHHH
Q 018307           52 SPHIFTALIIASWYLSNIGVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIH-------FLELVPIQHILSRKQFL  124 (358)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~-------~~~~~~~~~~~~~~~~~  124 (358)
                      ..+...+.+..+-...+.-+.++++..+++||=+ +=...++..+......+....       .....+.-..+..   .
T Consensus       160 ~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh-~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~---g  235 (330)
T KOG1583|consen  160 FWWLIGIALLVFALLLSAYMGIYQETTYQKYGKH-WKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLL---G  235 (330)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-hHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceecccc---C
Confidence            3566777777777777888899999999987755 666666666654333222210       0000110000111   1


Q ss_pred             HHHHHHHHHHHH-Hhhhhccccc-------cchhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhc
Q 018307          125 KIFALSAIFSFS-VVCGNTSLRY-------LPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLAS  194 (358)
Q Consensus       125 ~~~~~~~~~~~~-~~~~~~al~~-------~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~  194 (358)
                      ..+|....+.+. ...++.|.+.       +++=+.++....-=.+..+++.+.++..+++..|+|..+.++|..+..
T Consensus       236 ~~vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa  313 (330)
T KOG1583|consen  236 FKVPSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFA  313 (330)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHH
Confidence            114444444333 3344445443       222233344455566778889989999999999999999999998876

>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function

Probab=84.05  E-value=9.8  Score=28.21  Aligned_cols=46  Identities=15%  Similarity=0.107  Sum_probs=38.9

Q ss_pred             HHHHhhhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhhh
Q 018307          304 TLQVLGNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEA  349 (358)
Q Consensus       304 ~~s~~~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~~  349 (358)
                      .++..+-+=.+.+.++++.+-|++++...++|..+++.|..+....
T Consensus        59 vYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~  104 (107)
T PF02694_consen   59 VYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA  104 (107)
T ss_pred             HHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence            3455666678889999999999999999999999999998876554

; GO: 0016020 membrane

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=81.51  E-value=4.8  Score=35.36  Aligned_cols=124  Identities=9%  Similarity=-0.028  Sum_probs=80.3

Q ss_pred             HHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHhhcccc----cccccHHHHHHHHHHHHHHHHHHhhhhcccc
Q 018307           70 GVLLLNKYLLSFYGYRYPIFLTMLHMISCAVYSYVAIHFLELVPI----QHILSRKQFLKIFALSAIFSFSVVCGNTSLR  145 (358)
Q Consensus        70 ~~~~~~K~~~~~~~~~~p~~l~~~r~~~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~  145 (358)
                      ..++..|..+... -+.-+.++++.-+.+.++.++...+.+..+.    +..+....|..+...|++.....+-+.+=++
T Consensus       199 lnaiytkk~l~~v-~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgyvTg~QIK  277 (347)
T KOG1442|consen  199 LNAIYTKKVLPPV-GDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGYVTGWQIK  277 (347)
T ss_pred             HHHHhhheecccc-cCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhheeeEEEE
Confidence            3445556444321 2346789999999998888777765544322    2333344444445555655555555555566


Q ss_pred             ccchhHHHHHhhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhc
Q 018307          146 YLPVSFNQAIGATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLAS  194 (358)
Q Consensus       146 ~~~~~~~~~l~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~  194 (358)
                      .+++=+..+--.....--.+++..+++|..+...|-+.++++.|.....
T Consensus       278 ~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT  326 (347)
T KOG1442|consen  278 VTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYT  326 (347)
T ss_pred             ecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHH
Confidence            6666666666666666677888899999999999999888887766554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	358
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.53
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.4
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.39
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.34

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.53  E-value=1.2e-06  Score=65.35  Aligned_cols=72  Identities=11%  Similarity=0.163  Sum_probs=64.6

Q ss_pred             HHHHHHHHHHHHhhhhccccccchhHHHHH-hhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhcccc
Q 018307          126 IFALSAIFSFSVVCGNTSLRYLPVSFNQAI-GATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNSE  197 (358)
Q Consensus       126 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~~  197 (358)
                      .+...+++..+..+...++++.|.+.+..+ ....|+++.+++++++||++++.+++|+.+++.|+++....+
T Consensus        33 ~~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           33 SVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            345556778889999999999999999988 899999999999999999999999999999999999887544

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.40  E-value=4.6e-07  Score=70.20  Aligned_cols=63  Identities=8%  Similarity=0.032  Sum_probs=44.8

Q ss_pred             HHHHHHHHHHhccchhHHHHh-hhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhhhc
Q 018307          288 LVNLTNFLVTKHTSALTLQVL-GNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAK  350 (358)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~s~~-~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~~~  350 (358)
                      +..+++..++++.++..+..+ ..+.|++++++|+++|||++++.+++|+++++.|+++.+..+
T Consensus        42 ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           42 ASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            334556778999999988888 899999999999999999999999999999999999987654

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.39  E-value=7.6e-07  Score=68.95  Aligned_cols=71  Identities=11%  Similarity=0.165  Sum_probs=52.8

Q ss_pred             HHHHHHHHHHHHhhhhccccccchhHHHHH-hhhHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhhccc
Q 018307          126 IFALSAIFSFSVVCGNTSLRYLPVSFNQAI-GATTPFFTAIFAFLITCKKESAEVYCALMPVVFGIVLASNS  196 (358)
Q Consensus       126 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~l-~~~~p~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~l~~~~  196 (358)
                      .+...+++.+++.+.+.+++++|++.+..+ .+..|+++.++++++++|++++.+++|++++++|++++...
T Consensus        33 ~~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~  104 (137)
T 2i68_A           33 SVGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (137)
T ss_dssp             -CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            344456778889999999999999999888 89999999999999999999999999999999999988644

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.34  E-value=1.2e-05  Score=59.97  Aligned_cols=60  Identities=8%  Similarity=0.062  Sum_probs=53.4

Q ss_pred             HHHHHHHhccchhHHHHh-hhhhHHHHHHhhHhhcCCcccchhhhhHHHHHHHHHHhhhhc
Q 018307          291 LTNFLVTKHTSALTLQVL-GNAKAAVAAVVSVLIFRNPVTVMGMTGFAVTIMGVVLYSEAK  350 (358)
Q Consensus       291 ~~~~~~~~~~~~~~~s~~-~~l~~~~~~~~~~~~~ge~~~~~~~~G~~lii~g~~~~~~~~  350 (358)
                      +....++++.+...+..+ ..+.|+.+.++++++|||+++..+++|.++++.|++..+..+
T Consensus        45 ~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           45 WLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            445567899999998777 899999999999999999999999999999999999887643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00